Organism name Ensembl version Gene name Gene Ensembl ID Transcript Ensembl IDs Rank Number of transcripts covered Total number of transcript Amplicon lenght Chromosome Fwd primer start Fwd primer stop Fwd primer sequence # of SNPs in Fwd primer Fwd primer Tm Rev primer start Rev primer stop Rev primer sequence # of SNPs in Rev primer Rev primer Tm Ensembl status Warnings Mus musculus 50 Axin2 ENSMUSG00000000142 ENSMUST00000052915,ENSMUST00000106712,ENSMUST00000106711 2 3 3 100 11 108807280 108807298 TTCCATACAGGAGGATGCT 59 108807359 108810601 CGCCTTCTTGAAATAATACCTG 59 NA Mus musculus 50 2500003M10Rik ENSMUSG00000001017 ENSMUST00000076639,ENSMUST00000107342 2 2 8 117 3 90307190 90310037 TTAAGCAGAGCTTAAAGCAG 58 90307092 90307110 CTCTGGATTATGGGTAGGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 S100a3 ENSMUSG00000001021 ENSMUST00000001047 1 1 1 91 3 90405784 90405802 ATACAAGATCTGCCAGTCG 59 90406122 90406140 TATTGTAGTCACACTCCCG 58 NA DesignNoJunction Mus musculus 50 Icam2 ENSMUSG00000001029 ENSMUST00000106809 3 1 4 62 11 106243749 106243770 CTCTTCTTATCCTGTTCTACAG 57 106242703 106242721 CGTTCATGAAGCAATGGAG 59 NA DesignNoJunction Mus musculus 50 Impdh1 ENSMUSG00000003500 ENSMUST00000078155 1 1 1 80 6 29152712 29152730 TACCTCATAGCAGGGATCC 59 29152515 29152668 TGAGTACATCATGGATCGC 59 NA Mus musculus 50 Brd8 ENSMUSG00000003778 ENSMUST00000003876,ENSMUST00000097626 1 2 2 80 18 34767142 34767443 ATCATTGAGGACAAGGTGG 59 34767080 34767099 CTCTTCACAGAACGATAACG 58 NA Nonspecific Mus musculus 50 Gstm7 ENSMUSG00000004035 ENSMUST00000004137 1 1 1 118 3 107734549 107734567 CATGACACTGGGTTACTGG 59 107733799 107734239 CATAGTCAGGAGCATCACC 59 NA Mus musculus 50 Dnmt1 ENSMUSG00000004099 ENSMUST00000004202 2 1 1 80 9 20741627 20742523 AGAGACCAGGATAAGAAACG 58 20741026 20741046 TGTTACCTCTTCCAGTTTCTC 59 NA Mus musculus 50 Pcp2 ENSMUSG00000004630 ENSMUST00000111056,ENSMUST00000004749 2 2 3 111 8 3624586 3624605 ATCTCATGGATATGCTGGTC 59 3623545 3624512 TTCTGCATTCCATCCTTGG 59 NA Mus musculus 50 Eif2b2 ENSMUSG00000004788 ENSMUST00000004910 2 1 1 81 12 86563718 86563737 TCCAAAGAAGGTATCGAGAC 58 86563779 86564340 CAATGATCACCTTGTTGACTC 59 NA Mus musculus 50 Sqrdl ENSMUSG00000005803 ENSMUST00000005953,ENSMUST00000110506 1 2 2 81 2 122613294 122613314 AGTGGATTCAAGATAGAGTGG 58 122613357 122618096 CTGTAGGAGATCTCCTTGC 58 NA Mus musculus 50 Prg4 ENSMUSG00000006014 ENSMUST00000006171,ENSMUST00000111902,ENSMUST00000111901 3 3 3 82 1 152300666 152301195 TCCCATGCTTTCAGATGAG 59 152300602 152300620 CAACTAATGTCCCATTGCG 59 NA Mus musculus 50 Epn3 ENSMUSG00000010080 ENSMUST00000010224 1 1 1 176 11 94354253 94355094 CTAGTCAGTCCTCCATCCT 59 94353669 94353687 CATTTCCAGAGGGAACTGG 59 NA Mus musculus 50 Cd48 ENSMUSG00000015355 ENSMUST00000015499 3 1 2 87 1 173626088 173634940 GAAGTATTTGCCAGATCTTCTG 59 173634988 173635006 AGGTTAACAGGATCCTGTG 58 NA Mus musculus 50 Ace2 ENSMUSG00000015405 ENSMUST00000112271,ENSMUST00000073973 1 2 2 80 X 160613308 160613754 GAAGTTGCTCAAGATGCTG 59 160613797 160613816 ATATTCCTTGCTCCTACCAC 58 NA Mus musculus 50 Gata5 ENSMUSG00000015627 ENSMUST00000108890 2 1 2 107 2 180067160 180068532 CGTACCTGACTTCTTGGAG 59 180067071 180067089 CATAGATAGTGTCCGGTGC 59 NA DesignNoJunction Mus musculus 50 Hsd11b1 ENSMUSG00000016194 ENSMUST00000016338 2 1 1 80 1 195049859 195049879 GAACTCTACATAACCAAGGTC 57 195048406 195049818 TTCCTTCATAGCTGTTTCTG 57 NA Mus musculus 50 Lamp2 ENSMUSG00000016534 ENSMUST00000074913,ENSMUST00000016678,ENSMUST00000061755 1 3 3 88 X 35785083 35785102 CTACAGCATTAGAAATGGCA 57 35784205 35785032 AAATGAAAGGCACCTTCTC 57 NA Mus musculus 50 Pltp ENSMUSG00000017754 ENSMUST00000109316,ENSMUST00000059954,ENSMUST00000109317 3 3 3 130 2 164672276 164672294 CATGGAGAGCTACTTCCAG 59 164670244 164672096 TAATCACTGTCGGACTCAG 58 NA Mus musculus 50 Rpain ENSMUSG00000018449 ENSMUST00000018593 3 1 2 81 11 70785364 70785383 TGTGCAAGAAGTAATGGAGG 59 70785426 70786525 CAATTCCAACTGAAGCAAGG 59 NA Mus musculus 50 Mpdu1 ENSMUSG00000018761 ENSMUST00000094072 1 1 3 162 11 69472117 69472135 GTAATGCTGGAGCTAGTGG 59 69470705 69471447 CTATTGCTCCTTTCACGGT 59 NA Mus musculus 50 Stxbp5 ENSMUSG00000019790 ENSMUST00000038213 3 1 1 112 10 9497860 9503997 CCAATGATCTAGCAAAGATGTC 59 9490438 9490456 GCTGGTTACACTTGAACTC 58 NA Mus musculus 50 Npffr1 ENSMUSG00000020090 ENSMUST00000020287 1 1 1 87 10 61076934 61076952 ATGTTCATCCTCAACCTGG 59 61077003 61086042 AACCGGTGATAAGGTTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Eif4ebp2 ENSMUSG00000020091 ENSMUST00000020288 2 1 1 73 10 60915191 60915209 AGCTACCTCAGGACTACTG 59 60897838 60915154 AATGATTCGTGTTCCTCCC 59 NA DesignRelaxed Mus musculus 50 Il9r ENSMUSG00000020279 ENSMUST00000020518 1 1 1 82 11 32094681 32094699 ATTTACAGGATCGACTGCC 59 32094529 32094636 ACCTGGTTACTGGTAAAGAG 58 NA Mus musculus 50 Agxt2l2 ENSMUSG00000020359 ENSMUST00000101250,ENSMUST00000020625,ENSMUST00000109105 1 3 3 103 11 51400213 51404909 TGAATTCTGGGTCAGAAGC 59 51405508 51405526 CAGGTGACCATGATAAGCA 59 NA Mus musculus 50 Gabra6 ENSMUSG00000020428 ENSMUST00000109286,ENSMUST00000020703 3 2 2 80 11 42128695 42129941 ACTGTCTTTGGAATCACCA 58 42128633 42128652 ATAGGACACTTTGGGTAGAG 58 NA Mus musculus 50 4921536K21Rik ENSMUSG00000020434 ENSMUST00000020712 1 1 1 80 11 3790089 3790107 AAGAGCCATTTATCTCGGG 59 3788298 3790045 GTCAGAGGCTTTCATCTCC 59 NA Mus musculus 50 Rps27a ENSMUSG00000020460 ENSMUST00000102844,ENSMUST00000102845 3 2 2 82 11 29446777 29447213 TAAGGAAGGAATTCCTCCTG 58 29446714 29446732 TGTAGTCAGACAAAGTCCG 58 NA Nonspecific Mus musculus 50 Xbp1 ENSMUSG00000020484 ENSMUST00000109866,ENSMUST00000063084 1 2 2 93 11 5422014 5423347 GAAGAAGAGAACCACAAACTC 58 5423402 5423420 AGCGTGTTCTTAACTCCTG 59 NA Mus musculus 50 Sdc1 ENSMUSG00000020592 ENSMUST00000020911 1 1 1 84 12 8797597 8797616 CACTTCTGTCATCAAAGAGG 58 8797663 8798105 GGTGAAGTCTTGTTCTCCA 59 NA DesignRelaxed Mus musculus 50 1700012B07Rik ENSMUSG00000020617 ENSMUST00000106674,ENSMUST00000020941 1 2 3 232 11 109675044 109689153 AGGGTTTCTCATGAGAGGA 59 109658683 109658701 GACAATTCACGACCTTGTC 58 NA DesignNoJunction Mus musculus 50 Map3k3 ENSMUSG00000020700 ENSMUST00000002044 3 1 1 85 11 106010979 106011593 CAACCAAATCTCCTAGTGC 58 106011642 106011660 ATAGCACAAGTAGACCCTG 58 NA Mus musculus 50 Mink1 ENSMUSG00000020827 ENSMUST00000072237,ENSMUST00000072873,ENSMUST00000102559,ENSMUST00000102558,ENSMUST00000079244 3 5 5 80 11 70417689 70417708 AGACAGAGTATGAGTACAGC 58 70417751 70418510 CATTCATGATGGAGCTTGG 58 NA Mus musculus 50 Per1 ENSMUSG00000020893 ENSMUST00000101004,ENSMUST00000021271,ENSMUST00000102605 2 3 3 87 11 68916425 68916617 ATAAGAAGATACTGCAGCTGG 59 68916666 68916684 TCCATGGTGACATATTCCC 58 NA Mus musculus 50 Srd5a1 ENSMUSG00000021594 ENSMUST00000091514,ENSMUST00000059235 2 2 2 62 13 69739115 69739133 GTAACCCATCCCTGTTTCC 59 69733858 69733878 GATATTTATCACCATGCCCAC 58 NA DesignNoJunction Mus musculus 50 Nudt13 ENSMUSG00000021809 ENSMUST00000022343 2 1 2 87 14 21129008 21129850 TATTATCCACAGATGGCGC 59 21129901 21129919 CCTTGGGAAAGGAACTCTG 59 NA Mus musculus 50 Camk2g ENSMUSG00000021820 ENSMUST00000071816,ENSMUST00000080440,ENSMUST00000100837,ENSMUST00000076574 1 4 4 80 14 21585425 21585446 CACTGTATACATCAGATCCTGG 59 21585228 21585384 GTTCTCAGGCTTCAGATCC 59 NA Mus musculus 50 Ncoa4 ENSMUSG00000021908 ENSMUST00000022467 2 1 1 124 12 120499428 120499446 GACTACCTGGAACAGTGAG 59 120499534 120499552 TACTCCACCAATAGCAAGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rbm26 ENSMUSG00000022119 ENSMUST00000022715,ENSMUST00000077531,ENSMUST00000100327 2 3 3 84 14 105527881 105529463 AAACAAAGACTCAGATGCAG 58 105527816 105527834 TCAGTGACTTCTTCTCCAG 58 NA Mus musculus 50 Dnajc3b ENSMUSG00000022136 ENSMUST00000022734 1 1 1 81 14 119372026 119374362 TACGATGAAGCCATTCAGG 59 119374407 119374425 CTTTCTCTAAGCCTTCCCG 59 NA Mus musculus 50 Rrm2b ENSMUSG00000022292 ENSMUST00000022901 3 1 1 107 15 37861451 37866978 GGGATGAAGGACTTCACTG 59 37861362 37861380 CGATTTGAACAGCATCAGC 59 NA Mus musculus 50 Mtbp ENSMUSG00000022369 ENSMUST00000022998 2 1 1 83 15 55394575 55394593 ATGTCAGAGTGCTGTTGAG 59 55394637 55396182 GATTCTTCATATAGGTCAGCCA 59 NA Mus musculus 50 Zc3h7b ENSMUSG00000022390 ENSMUST00000109554,ENSMUST00000096328 1 2 2 86 15 81606269 81606716 ATCGAAACAGACTGCTACG 59 81606766 81606784 CAGAACATGAGGGAACAGG 59 NA Mus musculus 50 Josd1 ENSMUSG00000022426 ENSMUST00000023061 2 1 1 65 15 79507565 79507583 CAACCTTGACTCCAAACTC 58 79506601 79507536 AGAAATTTCCTGAGCTCAC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Lmf2 ENSMUSG00000022614 ENSMUST00000023283 3 1 1 81 15 89182461 89182482 GAATTCTTCCCATCTGTATCCT 59 89182306 89182422 GTGGACTCTTATCCTTTAGTCC 59 NA Mus musculus 50 Dgcr8 ENSMUSG00000022718 ENSMUST00000009321,ENSMUST00000115633 3 2 2 87 16 18259701 18259719 AGTTTGAAGTGGTTCCTGG 59 18258405 18259650 TTATTCTTACACCACCCGC 59 NA Mus musculus 50 Dopey2 ENSMUSG00000022946 ENSMUST00000045004 1 1 1 80 16 93771261 93771998 TTCACCATCAGTACAACCT 58 93772042 93772060 AATGGTCGTAAGACCTTCC 58 NA Mus musculus 50 Sfrs15 ENSMUSG00000022983 ENSMUST00000039280 1 1 1 80 16 90252690 90257510 TGCATTTGACAAGAAGCTG 58 90252628 90252647 GCATCCTCTTTCTTTGAGTC 58 NA Mus musculus 50 Pcdhgc5 ENSMUSG00000023036 ENSMUST00000066149 1 1 9 133 18 37887946 37887964 TAAGGATGAAGATGCTTGC 57 37992950 37992968 TATCAAACTGGTTGTTGGG 57 NA DesignNoJunction Mus musculus 50 Lnpep ENSMUSG00000023845 ENSMUST00000041047 1 1 1 80 17 17707983 17708598 AGAAATTGGATTTGGTGGC 58 17707921 17707940 TCTCTTCTCGGAATGTAAGC 59 NA Mus musculus 50 Slc25a27 ENSMUSG00000023912 ENSMUST00000024705 3 1 1 81 17 43801077 43801095 CTGGGAATTGTTCAGGAGG 59 43798639 43801033 CAGAGTACACTACGTGTCTG 59 NA Mus musculus 50 Mib1 ENSMUSG00000024294 ENSMUST00000052838 1 1 1 80 18 10760933 10763192 CAATGCATCTGGTGAAAGAC 59 10763235 10763253 AGCTCTTCATTGAGGTCAC 59 NA Mus musculus 50 Epb4.1l4a ENSMUSG00000024376 ENSMUST00000025234 1 1 1 80 18 33958214 33958232 ATCTTGTACCACCACTTCC 58 33957115 33958172 CATTTCTCCTCTGATGAACTG 58 NA Mus musculus 50 Rax ENSMUSG00000024518 ENSMUST00000025396 1 1 1 131 18 66097773 66097791 GTTCACCACTTACCAACTG 58 66095130 66097678 TTCTGGAACCATACCTGGA 59 NA DesignRelaxed Mus musculus 50 Ms4a4c ENSMUSG00000024675 ENSMUST00000072729,ENSMUST00000099672 3 2 2 94 19 11490926 11492141 GGGACCAATAATGTTCATTGTC 59 11493488 11493507 TGTTCAGAGTTAGACTGCTG 59 NA Nonspecific Mus musculus 50 Dkk1 ENSMUSG00000024868 ENSMUST00000025803 2 1 1 96 19 30621919 30622061 ACACCAAAGGACAAGAAGG 59 30621841 30621860 GGTTTACAGATCTTGGACCA 59 NA Mus musculus 50 Gbf1 ENSMUSG00000025224 ENSMUST00000026254 3 1 1 80 19 46344834 46345176 GTAGTGAGTCTATTGAGAACC 57 46345218 46345236 AATGGAATACTGTCTTGGC 57 NA Mus musculus 50 Banp ENSMUSG00000025316 ENSMUST00000026354,ENSMUST00000093078 1 2 2 109 8 124544534 124547910 AAATGATCCAGGTACTGCA 58 124547983 124548001 CTGAACCTGAATGTCACTG 58 NA Mus musculus 50 Atp10a ENSMUSG00000025324 ENSMUST00000055764 1 1 1 81 7 65995694 65995712 CATCGAGACTGCTAACCTG 59 65995757 66029333 TTCAGAAACAAGCTCCGAG 59 NA Mus musculus 50 Ptdss2 ENSMUSG00000025495 ENSMUST00000026568 3 1 1 93 7 148338911 148338929 TCTACTGTGGCATGAAGAC 58 148338986 148340263 TTCATCTTGCCCTTGTAGG 59 NA Mus musculus 50 D3Ertd751e ENSMUSG00000025766 ENSMUST00000108065,ENSMUST00000026867,ENSMUST00000026868 3 3 3 176 3 41550484 41550502 CGAATACACTTGGGATGGT 59 41550639 41552604 GCTTCCACAACTTCATAATTCC 59 NA Mus musculus 50 Lypla1 ENSMUSG00000025903 ENSMUST00000027036 1 1 1 173 1 4820388 4822402 GCCTTCTTGGTTTGATATCG 58 4829469 4829487 TATAAAGACAAGGCGCCTC 59 NA Mus musculus 50 Tram1 ENSMUSG00000025935 ENSMUST00000027068 1 1 1 80 1 13566523 13568189 CCTGATGACATTTCAGACGA 59 13566462 13566480 TGGAAGTAGAGTTCAGGGA 59 NA Mus musculus 50 Pip5k3 ENSMUSG00000025949 ENSMUST00000114042,ENSMUST00000097708,ENSMUST00000081154,ENSMUST00000097707 1 4 4 80 1 65315379 65315397 TCCCTTTCTCACTCATCTC 57 65315440 65316457 GAATCTATCATCTTCGGTGG 57 NA Mus musculus 50 1700029F09Rik ENSMUSG00000026049 ENSMUST00000027215 3 1 1 96 1 44145354 44148207 TGAATTACCTGAAGACCTCAG 59 44144851 44144869 TGACACATCACAGAAGCAG 59 NA DesignNoJunction Mus musculus 50 Epha4 ENSMUSG00000026235 ENSMUST00000027451,ENSMUST00000113540 1 2 2 87 1 77384547 77385055 AGGAGTTGGTGAATTTGGA 58 77384478 77384496 TTTCAGAGTCTTGATGGCC 59 NA Mus musculus 50 Cdh7 ENSMUSG00000026312 ENSMUST00000112701,ENSMUST00000086681,ENSMUST00000027542 3 3 4 86 1 111945679 111949434 TCTCCTGTAGGGACTTCAG 59 111949484 111949502 ACTATACACCACTCGAGCA 59 NA Mus musculus 50 Marco ENSMUSG00000026390 ENSMUST00000027639 2 1 1 81 1 122390826 122391325 GATTCAAGTTCTCAATCTGCAG 59 122390766 122390785 CTTGTCCTCGATAGCTAGTG 59 NA Mus musculus 50 Ahctf1 ENSMUSG00000026491 ENSMUST00000027768 2 1 1 80 1 181711038 181711056 CAGCTTCTCTGTCAGTACG 59 181709818 181710994 CAGAGCATCATCTAAGCCT 58 NA Mus musculus 50 F5 ENSMUSG00000026579 ENSMUST00000086040 2 1 1 80 1 166104430 166106356 TATCTGCAAGAAAGGCACC 59 166106400 166106418 AACACAGCAAATAGGAGCA 59 NA Mus musculus 50 Irf6 ENSMUSG00000026638 ENSMUST00000076521 2 1 2 86 1 194988000 194988804 TCATTAATCCAGGATCCACAG 59 194988852 194988870 GCTCAAGTTCATCCTCCTC 59 NA Mus musculus 50 Ttf1 ENSMUSG00000026803 ENSMUST00000100237,ENSMUST00000080198,ENSMUST00000061157 3 3 3 83 2 28929529 28930103 GATTGGTGGTACTAGAAACCA 59 28930148 28930166 TTTAGGATCACGTCCTCCA 59 NA Mus musculus 50 Ak1 ENSMUSG00000026817 ENSMUST00000113278,ENSMUST00000113277,ENSMUST00000068271 1 3 3 147 2 32486704 32488823 GAACAGAAGATTGGACAGC 58 32488934 32488952 TGTAATAAGTCTCCAGCCG 58 NA Mus musculus 50 Dolpp1 ENSMUSG00000026856 ENSMUST00000028209 2 1 2 101 2 30251958 30251976 CCAAACAAATAACGCCAGG 59 30252041 30252547 AGGTAGACCCTGCTATAGG 59 NA Mus musculus 50 Strbp ENSMUSG00000026915 ENSMUST00000072186,ENSMUST00000028279 2 2 2 80 2 37442067 37446188 ATATAGCTCCAGGTTACGGA 59 37439603 37439621 ACAGAACCATTCTCTTGGG 59 NA Mus musculus 50 Ltk ENSMUSG00000027297 ENSMUST00000028759,ENSMUST00000082130 1 2 2 80 2 119578515 119578673 CTTCATTCACAGAGACATTGC 59 119578455 119578473 AAATCTCCAATCTTGGCCA 59 NA Mus musculus 50 Dll4 ENSMUSG00000027314 ENSMUST00000102517 2 1 1 86 2 119153852 119153870 CTTCGGACATTATGAGTGC 58 119153920 119154277 AGACATATAGGCTGGTCAC 58 NA Mus musculus 50 Dok5 ENSMUSG00000027560 ENSMUST00000029075 3 1 1 80 2 170655445 170655578 TGTGAATCAGATCTTGAGGC 59 170655620 170655639 GCTGATGTCATTGATTCTGG 58 NA Mus musculus 50 Wisp2 ENSMUSG00000027656 ENSMUST00000029188 1 1 1 211 2 163654648 163654666 TTAAACCCAATTGCAGGGT 59 163654841 163657966 AGAAAGTTGGTGTCCTTGG 59 NA DesignRelaxed Mus musculus 50 Tm4sf4 ENSMUSG00000027801 ENSMUST00000029377 2 1 1 81 3 57237700 57237719 AGCTGTTTCTATCAACAAGG 57 57237762 57241507 TAGATAATCACCATCGTGGA 57 NA Mus musculus 50 Dclre1b ENSMUSG00000027845 ENSMUST00000029435,ENSMUST00000106833,ENSMUST00000063502,ENSMUST00000106834 3 4 5 111 3 103611335 103611353 CTAATCCGACAGTTCCCAC 59 103607904 103607923 GACTTAATACCACCCAGGTC 59 NA DesignNoJunction Mus musculus 50 Vangl1 ENSMUSG00000027860 ENSMUST00000029453 3 1 1 90 3 101988470 101993339 AAGTTCAGGATGACAACTGG 59 101988399 101988417 CTAATCCTGGCAATGTCCT 59 NA Mus musculus 50 Tbx15 ENSMUSG00000027868 ENSMUST00000029462 3 1 1 95 3 99120260 99120278 CACAGCCTATCAGAACCAG 59 99130362 99144481 AGTCCAGTTCTGTTTCTGC 59 NA Mus musculus 50 Hsd3b6 ENSMUSG00000027869 ENSMUST00000029463 1 1 1 90 3 98611748 98611766 GTTGTTATCCACACTGCAG 58 98610583 98611694 AGTTCTGGGTACCTTTCAG 58 NA Mus musculus 50 Rab13 ENSMUSG00000027935 ENSMUST00000065418 1 1 1 123 3 90027782 90028426 TCAAAGAGAATGCCTCTGC 59 90028631 90028649 AATCGGATTCTGTGCTCTC 59 NA Nonspecific Mus musculus 50 Nola1 ENSMUSG00000028010 ENSMUST00000029643,ENSMUST00000106366 3 2 2 155 3 129532403 129533524 AACGTGTCGTCTTGTTAGG 59 129532266 129532286 GCTGTCCAAATATCTCATCCA 59 NA Mus musculus 50 Scye1 ENSMUSG00000028029 ENSMUST00000029663 3 1 1 172 3 132337090 132337728 GAAATTCATAACGGAGTGGA 57 132336937 132336955 TCAGTCTTCTCTTTCACCT 57 NA Mus musculus 50 Efna4 ENSMUSG00000028040 ENSMUST00000029674 1 1 1 123 3 89139117 89139135 TTTGAGTTCTTGCCTGGAG 59 89138337 89138704 CTGACTCATGTGATGACCC 59 NA DesignNoJunction Mus musculus 50 Bcar3 ENSMUSG00000028121 ENSMUST00000029766 3 1 1 93 3 122228339 122228357 CTGAATCACTTGGCAACAG 59 122228414 122232514 CATCTGGTTGGAAATCTGC 58 NA Mus musculus 50 Cisd2 ENSMUSG00000028165 ENSMUST00000029815 1 1 1 75 3 135074006 135074024 ATCTGTGTCTCACCAAAGC 59 135071829 135071847 TTATGGGATCCATCACAGG 58 NA DesignNoJunction Mus musculus 50 Lrrc44 ENSMUSG00000028182 ENSMUST00000029833,ENSMUST00000041607 2 2 2 80 3 154761850 154761868 TCCTTACTGACATTCAGCC 58 154761909 154763941 GAAGAGTCTTTATCTGGTTTCC 58 NA Mus musculus 50 Lphn2 ENSMUSG00000028184 ENSMUST00000106128,ENSMUST00000106127,ENSMUST00000037655 1 3 4 100 3 148498479 148499324 AAATACACGATTGCATGCC 59 148498397 148498415 ATTAGGTAGAGCTGCACAC 59 NA Mus musculus 50 Dab1 ENSMUSG00000028519 ENSMUST00000106827 2 1 6 82 4 104352149 104352168 ATAAGCAGTGTGAACAAGCT 59 104352710 104352810 ATTCTTCTGCAGGTTCTGG 59 NA Mus musculus 50 Dab1 ENSMUSG00000028519 ENSMUST00000106827,ENSMUST00000080139,ENSMUST00000106830,ENSMUST00000030244,ENSMUST00000106826,ENSMUST00000106825 1 6 6 89 4 104278028 104285777 ATGATGAAGCTCAAGGGTG 59 104285829 104285848 GATTCCTCCAAAGGAGATGG 59 NA Nonspecific Mus musculus 50 St3gal3 ENSMUSG00000028538 ENSMUST00000106414,ENSMUST00000106412,ENSMUST00000030263,ENSMUST00000106410,ENSMUST00000097912 2 5 5 83 4 117605732 117612623 ATCAAAGAGTCCTGGACAC 58 117605667 117605686 TAAGTCAGTGATGACACGTG 59 NA Mus musculus 50 Calr4 ENSMUSG00000028558 ENSMUST00000106629,ENSMUST00000106631,ENSMUST00000106628,ENSMUST00000030285 3 4 4 81 4 108918888 108923941 CTTTGGCAGGTGAAATCAG 59 108923985 108924004 TATTTCCAACCTCTTCAGCA 58 NA Mus musculus 50 Epha8 ENSMUSG00000028661 ENSMUST00000030420 1 1 1 155 4 136487931 136487949 AGATCCCTATCCGATGGAC 59 136487709 136487812 CAGAGCTGATGACATCCTG 59 NA Mus musculus 50 Pqlc2 ENSMUSG00000028744 ENSMUST00000105801,ENSMUST00000053862,ENSMUST00000094564 1 3 3 98 4 138856995 138857013 ACAAAGAAGGAGGTCATCG 59 138856315 138856933 CTGCCGTATGAAATTGGTG 59 NA Mus musculus 50 Ddost ENSMUSG00000028757 ENSMUST00000030538 2 1 1 81 4 137866599 137866617 TCTCTGGATTTCTTCAGCG 59 137866661 137866769 CTGTCTGAGAATACCTCTGC 59 NA Mus musculus 50 Man2b2 ENSMUSG00000029119 ENSMUST00000031002 3 1 1 82 5 37207352 37207370 CATTATCACCCTGACTGTC 57 37206823 37207307 AGTTCTGAATCTGTGTTGAC 57 NA Mus musculus 50 Slc30a3 ENSMUSG00000029151 ENSMUST00000031037 2 1 1 102 5 31390778 31390993 CATCTACTTCAAGCCTCAG 57 31390694 31390712 GAGAACATCTCGAAGTGTG 57 NA Mus musculus 50 Gnpda2 ENSMUSG00000029209 ENSMUST00000031117 3 1 1 85 5 69969381 69970754 CTAGGGAGGTGATGATCCT 59 69969314 69969332 CCACATGTGATTGACTCCT 59 NA Mus musculus 50 Dck ENSMUSG00000029366 ENSMUST00000031311 2 1 1 99 5 89203166 89203184 TATATCAAGACTGGCACGA 57 89203247 89205892 TTTAAGCATTTCTCGGGAG 57 NA Mus musculus 50 Gtf2h3 ENSMUSG00000029387 ENSMUST00000031333 3 1 1 84 5 125039399 125040369 GGCAGTTAAAGATAATCAGGAG 58 125040903 125040922 GAAGTTCATGTACTGCAGTG 58 NA Mus musculus 50 Ulk1 ENSMUSG00000029512 ENSMUST00000112410,ENSMUST00000031490 3 2 2 88 5 111224844 111225184 TATGTACATGGCTCCTGAG 58 111224774 111224792 GACACTGGTAGACAATGGT 58 NA Mus musculus 50 Wasf3 ENSMUSG00000029636 ENSMUST00000016143 1 1 1 86 5 147263509 147263528 GCAAATTCCCTTCAAGACAG 59 147263577 147264905 ATCCTGTAGTGAGACCTCC 59 NA Mus musculus 50 Tpk1 ENSMUSG00000029735 ENSMUST00000067888,ENSMUST00000114644 2 2 3 94 6 43438966 43473897 TACTACACCAAGAAGGGCT 59 43438890 43438909 TCTATCTTCCTTTGGAGCAC 59 NA Mus musculus 50 Dlx6 ENSMUSG00000029754 ENSMUST00000031768 3 1 1 96 6 6815186 6815204 TAAACCATCGCTTTCAGCA 59 6815261 6817051 CATATCTTCACCTGTGTTTGTG 59 NA Mus musculus 50 2410127E18Rik ENSMUSG00000029775 ENSMUST00000068259,ENSMUST00000068240 3 2 2 80 6 30394506 30394525 TAGATCTCAACACCATGGTG 59 30394568 30396628 CATGTCTGTACCTCTCCTC 58 NA Mus musculus 50 8430410A17Rik ENSMUSG00000030060 ENSMUST00000032141,ENSMUST00000113606 1 2 2 89 6 87883348 87883366 CATCCAGTTTCTCCAGTGG 59 87883419 87886092 CTTGGGCTCCTTCTTAACC 59 NA Mus musculus 50 Ltbr ENSMUSG00000030339 ENSMUST00000032489 3 1 1 90 6 125262832 125262851 GTGTATCTGGACAATGAGTG 57 125262376 125262780 TAATTTCATCTGTGACCTCG 57 NA Mus musculus 50 Isg20l1 ENSMUSG00000030609 ENSMUST00000107425,ENSMUST00000107421,ENSMUST00000107427,ENSMUST00000051175,ENSMUST00000107423 1 5 5 234 7 86040900 86050747 GATCCTTAAGCTGTTGAAGG 58 86052044 86052062 ATCTTCCACAGATGAGTGG 58 NA DesignNoJunction Mus musculus 50 Ranbp5 ENSMUSG00000030662 ENSMUST00000032898 3 1 1 81 14 121332557 121332575 CTGCTTATTCCCTACTTGG 57 121332620 121334263 CTTTCTGAATCAGCTCCTG 57 NA Mus musculus 50 Prss8 ENSMUSG00000030800 ENSMUST00000032988,ENSMUST00000084541,ENSMUST00000098016 1 3 3 95 7 135071341 135071359 ATAAATGGGTGGTGTCTGC 59 135070726 135070744 TGTAGGAGTCTAGCTGGTG 59 NA DesignNoJunction Mus musculus 50 Fbxl19 ENSMUSG00000030811 ENSMUST00000106277 2 1 2 96 7 134893519 134893538 AATTCCGAGATACCCAACTG 59 134894394 134895524 TCTTCTTCAAGTGCCTCTC 58 NA DesignNoJunction Mus musculus 50 Oraov1 ENSMUSG00000031072 ENSMUST00000033388 2 1 2 245 7 152102426 152103520 GATTGGGTCTGAGATTGGA 58 152105540 152105558 GGAGTCACCTTGAAGTCTG 59 NA DesignRelaxed Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112408,ENSMUST00000112406,ENSMUST00000112405,ENSMUST00000112404,ENSMUST00000112403,ENSMUST00000112402,ENSMUST00000112401,ENSMUST00000078682,ENSMUST00000112400,ENSMUST00000112398 3 10 10 80 X 156920280 156920300 CATGACCATCAAGAACTTGAC 59 156920341 156921031 TTCACAGTTAAGTCATCCGG 59 NA Mus musculus 50 Rnf128 ENSMUSG00000031438 ENSMUST00000113027,ENSMUST00000113029,ENSMUST00000113026,ENSMUST00000033815 2 4 4 108 X 136177045 136177063 AAATGCAAGAGCTCAAAGC 59 136193417 136198133 GCCAATTTCCTTGTCTCCT 59 NA Mus musculus 50 Rab11fip1 ENSMUSG00000031488 ENSMUST00000054212,ENSMUST00000033878 1 2 2 85 8 28253855 28261174 TCATGAAGAAATACCAGCCC 59 28253789 28253807 CTGTTTGAGGACTAGCTGG 59 NA Mus musculus 50 Chrna6 ENSMUSG00000031491 ENSMUST00000033882 1 1 1 110 8 28522278 28522296 CTGTTTGCTCACTACAACC 58 28519837 28522205 GTTGACTTCATCCACATTGG 59 NA Mus musculus 50 Gtf2e2 ENSMUSG00000031585 ENSMUST00000033993 2 1 1 80 8 34866367 34866386 AGATTCTGGATGAGACACAG 58 34866428 34869043 GATTGTTGACTAAAGCCTCC 58 NA Mus musculus 50 Sin3b ENSMUSG00000031622 ENSMUST00000004494,ENSMUST00000109950 1 2 2 85 8 75255101 75255119 TGAACAAGATCAAGACCCG 59 75255168 75257252 CTGTTCCTTCTGGTAGGTG 59 NA Mus musculus 50 Ccl22 ENSMUSG00000031779 ENSMUST00000034231 2 1 1 74 8 97270878 97270896 GAAGGAGTTCTTCTGGACC 59 97273713 97273731 ATATCTCGGTTCTTGACGG 58 NA DesignNoJunction Mus musculus 50 2200002K05Rik ENSMUSG00000031937 ENSMUST00000034413 1 1 1 80 9 15061932 15061950 ACTACATCGTCACTGTCAC 59 15061994 15062106 CATAGCGGATCTCAGACAC 59 NA Mus musculus 50 1810021J13Rik ENSMUSG00000032121 ENSMUST00000034632 2 1 1 87 9 37026812 37026833 GGAGCTCTGATCATTACTACAG 59 37026879 37030073 CGTCCACAATCTTCATTTCTC 59 NA Mus musculus 50 Bckdhb ENSMUSG00000032263 ENSMUST00000116537,ENSMUST00000034801 1 2 3 119 9 83906206 83906224 GATGTGGATACAGTTTGCA 57 83962792 84015852 GAAACATTCTTCCTGGACC 58 NA Mus musculus 50 Ppib ENSMUSG00000032383 ENSMUST00000034947 3 1 1 82 9 65909322 65909341 TTTGGACTCTTTGGAAAGAC 57 65909385 65910812 TTGTAGCCAAATCCTTTCTC 57 NA Mus musculus 50 Lrrc2 ENSMUSG00000032495 ENSMUST00000035076 1 1 1 80 9 110860384 110860402 GTGTCAAGAAGCACAAAGC 59 110860444 110863319 ACTCCTCCTTTATCTTCTCCA 59 NA Mus musculus 50 Prkar2a ENSMUSG00000032601 ENSMUST00000049946 3 1 2 150 9 108594927 108594945 AATCAGACACGTTCATCGT 59 108595383 108595401 CTCTTGTCTTCGGAAAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxl8 ENSMUSG00000033313 ENSMUST00000036221 1 1 1 81 8 107791056 107791918 AAAGCATCAGTTGTGACTG 58 107791962 107791981 CTTAGGTTGTGAATGTGGTC 58 NA Mus musculus 50 Lrrc14 ENSMUSG00000033728 ENSMUST00000036423 3 1 1 102 15 76544348 76544366 TTTATGTGTCTTCGGGAGC 59 76544526 76544544 CCAGTTCTAGGCTTTCCAG 59 NA DesignNoJunction Mus musculus 50 3300002A11Rik ENSMUSG00000033731 ENSMUST00000046994 2 1 1 127 12 100599592 100599610 AAGAGTTCCAGGTCAAAGC 59 100599701 100599850 CTCAGAAGAGCCTTGTAGC 59 NA Mus musculus 50 Atp2c2 ENSMUSG00000034112 ENSMUST00000095171,ENSMUST00000034290 3 2 2 104 8 122266342 122266498 GTAGAGACTCTTGGTTGCT 58 122266566 122266584 ATGGAACCCATCAGATGTG 59 NA Mus musculus 50 Smc4 ENSMUSG00000034349 ENSMUST00000042901,ENSMUST00000107803 2 2 2 80 3 68828265 68829758 GAAGATTGGGAGACTTAGGAG 59 68829799 68829818 CAATGTAGTCCAATGCATGG 59 NA Mus musculus 50 Csta ENSMUSG00000034362 ENSMUST00000096090 3 1 1 95 16 36122444 36125069 CTTCATTAAGATGGATGTAGGG 58 36122370 36122388 TGGTAACCAGTAAGTTCCA 57 NA Nonspecific Mus musculus 50 Pja1 ENSMUSG00000034403 ENSMUST00000113797 3 1 4 214 X 96662909 96663476 TGAGGATTATTCCAGGTGG 58 96662713 96662731 AGTAATCGTCGGTGTATGC 59 NA DesignRelaxed Mus musculus 50 1810048J11Rik ENSMUSG00000034501 ENSMUST00000044352 2 1 1 82 12 73676454 73676472 CTGAAGAGCAGTGGAAGAG 59 73676516 73680299 GTAAACGCCCATACTAGACTC 59 NA Mus musculus 50 Rnf44 ENSMUSG00000034928 ENSMUST00000037422 3 1 1 86 13 54783766 54783950 CCTACTTCCTTTCAATGCTG 58 54783699 54783717 CCATCTCTACGTCATCCAC 59 NA Mus musculus 50 Cntd1 ENSMUSG00000035112 ENSMUST00000103108 3 1 1 88 11 101130641 101130894 TCACTAGTGTCTCAGACCA 59 101130946 101130964 CAGATCAAATCGGAACGTC 58 NA Mus musculus 50 Capn5 ENSMUSG00000035547 ENSMUST00000040971,ENSMUST00000107112 1 2 2 81 7 105279755 105279773 AGGAATGGCAGAAAGTGAG 59 105277941 105279710 AAGGTCATCCAGAATTCCC 58 NA Mus musculus 50 Gm98 ENSMUSG00000036098 ENSMUST00000096230,ENSMUST00000088013 2 2 2 81 19 10291264 10291923 TTGTAGTGAACAAGGAGCG 59 10291201 10291220 GTCTCTAGGTTGTCTGTCAG 59 NA Mus musculus 50 Ndufa13 ENSMUSG00000036199 ENSMUST00000110167 3 1 1 195 8 72418449 72418467 CTGATTGAGGACTTGGAGG 59 72418179 72418197 CATACATCTCGCCAATGAG 58 NA DesignNoJunction Mus musculus 50 Qsox2 ENSMUSG00000036327 ENSMUST00000116561,ENSMUST00000036187 3 2 3 80 2 26080722 26080740 AATGATCGACTTCCTGCAG 59 26080443 26080678 TCACTGGACTGAATAGGGT 59 NA Mus musculus 50 BC032203 ENSMUSG00000036568 ENSMUST00000040624 2 1 1 84 17 46945436 46946528 TAAAGGAGCTTTCATCCTCC 59 46945371 46945389 ATTTAGTGACCGGAACTGG 59 NA Mus musculus 50 Trim17 ENSMUSG00000036964 ENSMUST00000047697,ENSMUST00000075141 2 2 2 94 11 58779042 58780288 AGTATAAGCTCAAGTTGGAGG 59 58780343 58780362 AGTTAAGGTCTGTTCCTCCT 59 NA Mus musculus 50 Cnpy4 ENSMUSG00000036968 ENSMUST00000110934 1 1 1 82 5 138633833 138633851 GTACTTCCACCATCAGGAG 59 138633896 138634001 GTAGACAAGCAGTTTCAGAG 58 NA Mus musculus 50 OTTMUSG00000008462 ENSMUSG00000037028 ENSMUST00000075999 2 1 1 65 4 101583028 101583945 TTGTTCAGATGCCTGAAGAG 59 101583973 101583991 TGACTTTGAGAGTTGGCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Zfp60 ENSMUSG00000037640 ENSMUST00000108336 1 1 2 90 7 28516467 28516485 TTTGTGTCTTCGGTCTCTG 59 28522004 28523336 AAATGTCACTGACCCACAG 59 NA InUTR Mus musculus 50 Ahdc1 ENSMUSG00000037692 ENSMUST00000105916,ENSMUST00000105915,ENSMUST00000044521,ENSMUST00000105914 1 4 4 84 4 132622124 132622142 ACACATTTACCGTCACCTC 59 132622190 132632917 ATTGCTCTTCTGAAAGCCA 59 NA InUTR Mus musculus 50 Vstm2l ENSMUSG00000037843 ENSMUST00000109523 2 1 2 146 2 157762970 157769604 AAATAAGTGTGGTCAAGGTG 58 157769713 157769731 GGTATGCTTTGACCTTGTG 58 NA DesignRelaxed Mus musculus 50 Egr2 ENSMUSG00000037868 ENSMUST00000105438 2 1 2 185 10 67000868 67000886 GATACCATCCTAGGCTCAG 58 67001135 67002508 ATGTTGATCATGCCATCTC 57 NA InUTR Mus musculus 50 Rcor1 ENSMUSG00000037896 ENSMUST00000116388,ENSMUST00000084968 1 2 2 84 12 112346786 112346804 CAGAACATCAAGCAGACGA 59 112346850 112347074 TTTGAATAACCTCTGGGAGTC 59 NA Mus musculus 50 Gmds ENSMUSG00000038372 ENSMUST00000041859 2 1 1 80 13 32192279 32192297 CAACTGGAATGTTTCAGCT 58 32032463 32192237 CCACATAGCCTCTACATAGTC 59 NA Mus musculus 50 Josd2 ENSMUSG00000038695 ENSMUST00000035844 1 1 1 63 7 51724280 51724298 CAACAACGTCCTTCAAGAG 58 51724325 51725785 TAGCCTCTTGCAGATTTCG 59 NA DesignNoJunction Mus musculus 50 Isg20 ENSMUSG00000039236 ENSMUST00000038142 2 1 2 132 7 86061609 86064940 AGAACATCCAGAACAACTGG 59 86065035 86065053 GAAGTTCAGTCTGACGTCC 59 NA InUTR Mus musculus 50 Tgfb2 ENSMUSG00000039239 ENSMUST00000045288,ENSMUST00000085692 3 2 2 80 1 188452908 188454501 CCTACTGCTTTAGAAATGTGC 59 188452848 188452867 ATTTCCATCCAAGATCCCTC 59 NA InUTR Mus musculus 50 Tnfsf10 ENSMUSG00000039304 ENSMUST00000046383 1 1 1 80 3 27224979 27227979 AGCTCATTGAAGAGGTGAC 59 27232991 27233009 AGGGAGGAGTACTTAGCTG 59 NA Mus musculus 50 Ajap1 ENSMUSG00000039546 ENSMUST00000105646 3 1 2 86 4 152756375 152756393 GGTTTGAAATCTCCTGCTG 58 152748418 152756325 AACGGAATCCATGAAACAG 58 NA InUTR Mus musculus 50 Ncoa7 ENSMUSG00000039697 ENSMUST00000105514,ENSMUST00000068567,ENSMUST00000092610,ENSMUST00000099982 2 4 4 90 10 30368338 30372754 CATGGATAACCAGATATTTGGG 58 30368269 30368287 GGTGTAGAGAAACGTTTCG 58 NA Mus musculus 50 Tmem120a ENSMUSG00000039886 ENSMUST00000043378 2 1 1 90 5 136217836 136217855 TATCTGCCTAAGAAGAACGG 58 136212873 136213067 TGTAAGCGAACTTAGCCTG 59 NA Mus musculus 50 Gjb6 ENSMUSG00000040055 ENSMUST00000039380 2 1 1 89 14 57743644 57749646 CAAGACTCAGAATAAGCCTG 57 57743574 57743592 CTTCCCTATGCTGGTAGAG 58 NA InUTR Mus musculus 50 Thbs1 ENSMUSG00000040152 ENSMUST00000039559 1 1 1 83 2 117944869 117944887 ATGGTAGCTGGAAATGTGG 59 117944934 117945067 CTTCTTTGCACTCATCGAC 58 NA Mus musculus 50 Trappc5 ENSMUSG00000040236 ENSMUST00000044857 2 1 1 71 8 3679367 3679385 TCTACATCATCGAGAGGGA 58 3679420 3679438 AGTTCAGTGTGCTGTTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 C78409 ENSMUSG00000040441 ENSMUST00000095270,ENSMUST00000038612 1 2 2 80 10 126616727 126616747 CTCTACACGTCTTTCTTTCCT 59 126615929 126616685 TACTGCGAAAGTTCCAGTG 59 NA Mus musculus 50 Iqcc ENSMUSG00000040795 ENSMUST00000046675 1 1 1 92 4 129294413 129294611 TCGAAAGGAGTACCTAATTCTC 59 129294342 129294360 GTCTTCTCATAGGCCTGTC 59 NA Mus musculus 50 Irgq ENSMUSG00000041037 ENSMUST00000049020 1 1 1 138 7 25316636 25316654 CTGGTATTGGTGCTACCAG 59 25316756 25316774 CATTCTGGGAATCTCCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Car8 ENSMUSG00000041261 ENSMUST00000098290,ENSMUST00000066674 2 2 2 83 4 8110456 8110474 CTTACTATCCCACCTTGCA 58 8096904 8110410 TTCTTCTATCTGCATCTGGG 58 NA Mus musculus 50 Paqr6 ENSMUSG00000041423 ENSMUST00000079359,ENSMUST00000107546 3 2 2 183 3 88171280 88171617 TCGACTATATTGGCCACAG 58 88171764 88171782 AACAGGTTCCCAATCACTG 59 NA Nonspecific Mus musculus 50 Cdc42ep4 ENSMUSG00000041598 ENSMUST00000106616,ENSMUST00000053536 1 2 2 142 11 113590227 113590245 TGTTCTCAGCATCATGGAC 59 113590103 113590121 TTTCCTGTCTCCCTAGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kirrel ENSMUSG00000041734 ENSMUST00000041732 2 1 1 84 3 86892181 86892293 CTTTATGTAAACGGACCTCCT 59 86892117 86892135 TAAAGCACTCCACCTTACC 58 NA Mus musculus 50 Pde3a ENSMUSG00000041741 ENSMUST00000111839 1 1 2 77 6 141353716 141353734 CAGAATGGGACCACAAGAG 59 141447193 141447212 ATTTGGCAGTAGATTCTCCT 58 NA DesignNoJunction Mus musculus 50 Agrn ENSMUSG00000041936 ENSMUST00000094380,ENSMUST00000105575,ENSMUST00000105574,ENSMUST00000075787 2 4 6 83 4 155544516 155544701 CTTCTGTGAGACAGTCCTG 59 155544451 155544469 CCTTTCAGTTCCAGGTAGG 59 NA Mus musculus 50 Tnfrsf18 ENSMUSG00000041954 ENSMUST00000040274 2 1 2 202 4 155402145 155402608 AGACTTTGGACCAAAGACC 59 155402774 155402792 TCTCACCAAGGGTATAGCT 59 NA DesignRelaxed, InUTR Mus musculus 50 Tmcc2 ENSMUSG00000042066 ENSMUST00000045473 2 1 1 61 1 134255603 134256857 CTACAGGTATGAGAGGCTG 58 134255560 134255578 TTTCATTCTGGTGAAGCTC 57 NA DesignNoJunction Mus musculus 50 Sprr2i ENSMUSG00000042157 ENSMUST00000047264 1 1 1 177 3 92211944 92212626 CGGAGAAGTAGATCCTGAG 58 92212767 92212785 GACATGACTCAGGACAAGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Acot5 ENSMUSG00000042540 ENSMUST00000046422,ENSMUST00000072505 3 2 2 81 12 85414441 85414460 TACTTTGAGGAAGCTGTGAC 59 85416275 85416293 CTTTGGAAATCCCTAGCAG 57 NA DesignNoJunction Mus musculus 50 Gpr151 ENSMUSG00000042816 ENSMUST00000054738 2 1 1 60 18 42738645 42738663 ATTCATGTCCATGTTCGGT 59 42738603 42738621 CAGAAGTAAAGGAAGGCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 1700049L16Rik ENSMUSG00000043859 ENSMUST00000049520 1 1 1 60 10 71442995 71443013 TCTAAATCCGACCTGAACG 59 71442953 71442971 GTTTCTTTGCATGCTCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mrpl50 ENSMUSG00000044018 ENSMUST00000057829 3 1 1 136 4 49527438 49533840 GATCCAGGAAGGAGAAGGA 59 49527320 49527338 ATGAGATTCCAAGCGACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4933402P03Rik ENSMUSG00000044084 ENSMUST00000056941 2 1 1 84 11 69631428 69631551 AAACAGAAGTAGTCCAGGT 57 69631362 69631380 AGGATACAGTGGATGTGGA 59 NA DesignNoJunction Mus musculus 50 OTTMUSG00000013918 ENSMUSG00000044689 ENSMUST00000061282 1 1 1 60 1 64011359 64014218 ATCCTGACCTGACTATCCA 58 64014242 64014260 CTGCTGATCTTTCCATGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1030 ENSMUSG00000044923 ENSMUST00000056849 2 1 1 60 2 85824606 85824627 CATCAATGTTTGTAGTAGCAGG 59 85824645 85824666 GAAATGAGGATTATGAACAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pwwp2a ENSMUSG00000044950 ENSMUST00000094294 2 1 3 103 11 43518889 43518907 GACTCTTCTCTGAAGACGG 59 43518974 43530544 CATTTGTTGAGACCTGCTG 59 NA Mus musculus 50 Taar6 ENSMUSG00000045111 ENSMUST00000057080 1 1 1 60 10 23704555 23704574 TGAAATCTGTGTTTGGTGTG 58 23704514 23704532 TAAAGCGTAGATCAGAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hs6st1 ENSMUSG00000045216 ENSMUST00000088174 2 1 1 67 1 36126029 36160378 GAAAGTTCTACTACATCACCCT 59 36160406 36160424 TACATGTCGCCATTCACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cxcr4 ENSMUSG00000045382 ENSMUST00000052172 1 1 1 60 1 130486219 130486237 TCTTTGTCATCACACTCCC 59 130486177 130486195 TTCCCAAAGTACCAGTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ddx28 ENSMUSG00000045538 ENSMUST00000058579 3 1 1 60 8 108534203 108534224 GACATTTATGAGACTGAAGGGA 59 108534164 108534183 CTGTTTGAGGATCTGAACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 9030224M15Rik ENSMUSG00000045555 ENSMUST00000058747 3 1 1 104 10 40449879 40457486 CAGTACCACTCAGATTGCA 59 40457554 40457572 CCAAACCTGTCATCAAGAC 58 NA Mus musculus 50 D830014E11Rik ENSMUSG00000045750 ENSMUST00000055994 1 1 1 100 5 106257795 106257813 AAATGAGACCCGAAGAAGG 59 106257877 106258281 ACATTTCTGCTCCCATTCC 59 NA InUTR Mus musculus 50 BC049762 ENSMUSG00000045942 ENSMUST00000109118,ENSMUST00000054226,ENSMUST00000065950 1 3 3 102 11 51067908 51067926 TTTCTCCTTATGCTGAGGC 59 51067518 51067536 GAAAGTGGAGGGTTACCAG 59 NA DesignNoJunction Mus musculus 50 Olig1 ENSMUSG00000046160 ENSMUST00000056882 1 1 1 135 16 91270125 91270143 TACTATGCGATTTCCCAGG 58 91270242 91270260 AGGATGAGGAGATAGGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rbm16 ENSMUSG00000046201 ENSMUST00000076734 1 1 2 80 17 3185803 3185821 CGACAAGATTCATTTCGGG 58 3185865 3187597 CCAGGCAATCTTAATGACC 58 NA Mus musculus 50 Ppargc1a ENSMUSG00000046379 ENSMUST00000053488 1 1 1 60 5 51847211 51847231 AGCATCAGGATTTCATCTGAG 59 51847171 51847192 TACTCCAAAGTTTAGTGACTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1110002N22Rik ENSMUSG00000046909 ENSMUST00000050207 1 1 1 96 11 79950770 79951428 CTGGAAGAGATTTCTTCAGTC 58 79950694 79950712 GAAGCAGAGATGTGTTCTG 58 NA Mus musculus 50 Zfp295 ENSMUSG00000046962 ENSMUST00000113734,ENSMUST00000052089 2 2 3 152 16 98174248 98177930 CTTGCCAGATAAAGTGCAG 58 98174114 98174133 TATGAGCTCGGAATTTCTGG 59 NA Mus musculus 50 Adamts12 ENSMUSG00000047497 ENSMUST00000061318 3 1 2 80 15 11266139 11266157 CCTCTGTGACCATCAAGTC 59 11266198 11275263 CAAGTTAAATCAGCACTCTTCC 59 NA Mus musculus 50 Gpr81 ENSMUSG00000049241 ENSMUST00000051138 3 1 1 60 5 124329228 124329246 TATGGTGAATGCCATCTCC 59 124329186 124329204 CAAAGTCCAGAGGACACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4921525H12Rik ENSMUSG00000049565 ENSMUST00000062935 3 1 3 95 3 108559786 108560159 TGACCAACTGAAGAATAAGG 57 108560217 108568041 TGTTCCTTGTTCATCAGTC 57 NA Mus musculus 50 Zfp161 ENSMUSG00000049672 ENSMUST00000112674,ENSMUST00000062369,ENSMUST00000112676 1 3 3 198 17 69734829 69736654 GCCTGAATTGTTCATGGAG 58 69736816 69736834 CTTAAAGTACGTGCTGCAG 58 NA DesignNoJunction, InUTR Mus musculus 50 C330006D17Rik ENSMUSG00000049742 ENSMUST00000054878 1 1 1 62 9 7836746 7836764 CCTCCAATCGTTCTAGGTG 59 7836702 7836720 AAATCTGAAGAGACAGCCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ankrd55 ENSMUSG00000049985 ENSMUST00000056047 2 1 2 132 13 113126473 113134258 AAGACACAGAGCTTTCACC 59 113134354 113134372 ACACAGGAAGTATGGAACC 58 NA Mus musculus 50 Bex1 ENSMUSG00000050071 ENSMUST00000058125,ENSMUST00000113120,ENSMUST00000113118 1 3 3 60 X 132749064 132749083 ACATGGAGAATGACCATCAG 59 132749023 132749041 CTGATGGTATCTTGTGGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bex1 ENSMUSG00000050071 ENSMUST00000058125,ENSMUST00000113120,ENSMUST00000113118 2 3 3 60 X 132749064 132749082 CATGGAGAATGACCATCAG 57 132749022 132749040 TCTGATGGTATCTTGTGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr215 ENSMUSG00000050654 ENSMUST00000061723 3 1 1 60 6 116532923 116532941 CAGGAATTTACCCTGGAGG 59 116532881 116532899 GTGAGAAGAGAAGTCTGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Apol10a ENSMUSG00000050982 ENSMUST00000060551 2 1 1 85 15 77311717 77315278 ATTAGGAAAGTGGAACGTC 57 77315327 77315345 ATAAGGCTCCTCAGATCTG 57 NA Mus musculus 50 Gja10 ENSMUSG00000051056 ENSMUST00000056517 1 1 1 60 4 32689097 32689117 CAGATCATCTTTGTGTCTTCC 58 32689057 32689076 TGAGTCTATAAAGGGCATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Crebzf ENSMUSG00000051451 ENSMUST00000061767,ENSMUST00000107206 3 2 2 89 7 97592529 97592547 GGACAAGGATAAGGTGTCG 59 97592600 97592618 GAGCAGATTACTTGACCCT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 OTTMUSG00000000997 ENSMUSG00000051452 ENSMUST00000050771 3 1 1 127 11 83980839 83980858 TGATTGCATCCTATGATTCC 57 83978135 83978810 TTCTAGAGGAACTCTTACTACC 57 NA Mus musculus 50 1700007N14Rik ENSMUSG00000052099 ENSMUST00000063785 2 1 1 119 14 64713840 64714757 CCAGCATGATTAGAACTGG 57 64714840 64714858 TTTGTAGTCTCTGTGAGCA 58 NA InUTR Mus musculus 50 8030423F21Rik ENSMUSG00000052295 ENSMUST00000064097 3 1 1 82 5 53001349 53004399 CTGACTTTGTACAGACATTCC 58 53001287 53001305 GGTGACAGGAGAGTAACAG 59 NA InUTR Mus musculus 50 4921508M14Rik ENSMUSG00000052376 ENSMUST00000061679 1 1 1 60 12 35558950 35558969 TTTATGACGCTTCTCCTGAG 59 35558909 35558927 AAACGAAAGAACGAACGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC049349 ENSMUSG00000052446 ENSMUST00000109999 2 1 3 60 8 74489772 74489791 TCTATGGAGATGTGATGCAG 58 74489814 74490011 TCCCAGTTTATGCCTACAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Rap1b ENSMUSG00000052681 ENSMUST00000064667 1 1 1 80 10 117255661 117257532 AAAGACACTGATGATGTTCC 57 117255600 117255619 TTGTTCCTTTCCTACAACTC 57 NA Mus musculus 50 Gas1 ENSMUSG00000052957 ENSMUST00000109819,ENSMUST00000065086 3 2 2 104 13 60277474 60277492 TCGGTCAAAGAGAACATGG 59 60277388 60277406 TTCTTCGTCGTAGTAGTCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1700069B07Rik ENSMUSG00000053081 ENSMUST00000065310 2 1 1 92 7 128851026 128851045 CATATTGACTGTGGGAACAG 58 128851100 128851118 CAGTCTTGAGCTTCAACAC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 MGI:2143852 ENSMUSG00000054027 ENSMUST00000099396 3 1 1 80 10 86283501 86283658 CCCAAGTAGCTTTGTAGAC 57 86283702 86283720 TGAACTATGACCACATCGA 57 NA Mus musculus 50 Atp10b ENSMUSG00000055415 ENSMUST00000056678 3 1 2 169 11 42969622 42969641 CTGAATTTCATCCCTGTGGT 59 42969771 42972107 ATTATCTTGCTGCTGTAGACC 59 NA InUTR Mus musculus 50 Epha6 ENSMUSG00000055540 ENSMUST00000068860 1 1 1 80 16 60425203 60526285 CATTAAATGGGTGGGATGC 58 60425141 60425159 CCATGACATTGCATACCTG 58 NA Mus musculus 50 Col8a2 ENSMUSG00000056174 ENSMUST00000106130 3 1 2 91 4 125987934 125988117 TATTACTGTCCCTCCTGGG 59 125988172 125988190 AATCACCTTTGTCTCCTGG 59 NA Mus musculus 50 OTTMUSG00000005065 ENSMUSG00000056288 ENSMUST00000070315 2 1 1 90 11 4526482 4526501 AAACTCCTCTTCCCTTTCAG 59 4520984 4526429 CTTGATAAGACCTGCTCCC 59 NA InUTR Mus musculus 50 4931429L15Rik ENSMUSG00000056617 ENSMUST00000070831 2 1 1 100 9 46112309 46112330 GAAAGAGTGAAGTTTGTAAGCC 59 46112144 46112248 AAATTCTGGAGCTGACCTG 59 NA Mus musculus 50 Fkbp2 ENSMUSG00000056629 ENSMUST00000070878 1 1 1 80 19 7053515 7053533 GAGTGAAGAAACGTGTGGA 59 7053151 7053471 CTAGCTTTCCCGTGTAGTG 59 NA Mus musculus 50 Tmem140 ENSMUSG00000057137 ENSMUST00000074949 2 1 1 155 6 34813305 34813323 TTTGATGAGTGTTCCTGGG 59 34822629 34822647 GGAGAGCGTAGAACATCAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 V1rg12 ENSMUSG00000058132 ENSMUST00000072801 2 1 1 60 7 12890849 12890868 CACCCAAACCATACTAATCC 57 12890887 12890909 GATGGAAGAGATAGAGTAGAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rpl5 ENSMUSG00000058558 ENSMUST00000082223 3 1 1 80 5 108333845 108333863 GAGGAAGATGAAGATGCGT 59 108333906 108336219 CATCTCCTCCATCATGTCTG 59 NA Nonspecific Mus musculus 50 Olfr1406 ENSMUSG00000058981 ENSMUST00000072395 1 1 1 60 1 175113806 175113824 TTGTGATCCACTATGGCTG 59 175113764 175113783 CTAGTGTTCTCTGATTTGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rad51l1 ENSMUSG00000059060 ENSMUST00000079533 2 1 1 80 12 80403508 80403526 CTGAGTTACAGAGGTGTCC 59 80403570 80404330 TAACTCATAAGCCGTTTGC 58 NA Mus musculus 50 Pde1a ENSMUSG00000059173 ENSMUST00000102654,ENSMUST00000102655,ENSMUST00000102653,ENSMUST00000090756,ENSMUST00000102651,ENSMUST00000102652 2 6 7 81 2 79728093 79737235 ATACAGGTATCATGCACTGG 59 79728031 79728052 GTGTGCTCATAATCATGAATGG 59 NA Mus musculus 50 Nrsn2 ENSMUSG00000059361 ENSMUST00000079278 1 1 1 128 2 152199850 152199868 GTATATCAACCGACCCTGG 59 152195568 152195587 TTAACAAGCTCTAGTTTGGG 57 NA DesignNoJunction Mus musculus 50 Fxyd2 ENSMUSG00000059412 ENSMUST00000085938 3 1 3 111 9 45214225 45214243 ATATCAGATCTGTCAGCGA 57 45216221 45216394 CGGTTTCATAGTCGTACTC 57 NA Mus musculus 50 1700019M22Rik ENSMUSG00000059695 ENSMUST00000073560 3 1 1 66 12 97285273 97285291 GATGTTGAGCCATCAACCT 59 97285225 97285243 AACAGGATTTACGATGGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kif13b ENSMUSG00000060012 ENSMUST00000100473 1 1 1 80 14 65341221 65343547 CAAGCTACAAGGATATTGAGTC 58 65343588 65343606 TTTCCTCGTTCATGTTGGT 59 NA Mus musculus 50 Olfr235 ENSMUSG00000060049 ENSMUST00000073507 1 1 1 60 19 12342746 12342764 AAGATCACCCAGTTCATCC 58 12342786 12342806 AAAGAGGTACTGTGATTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ap2a1 ENSMUSG00000060279 ENSMUST00000085399,ENSMUST00000107857 2 2 2 80 7 52171396 52171542 GAAGCAGATAGGGTACCTG 58 52171334 52171353 TTGATAGCGTTGTTGATGAG 58 NA Mus musculus 50 Acyp2 ENSMUSG00000060923 ENSMUST00000109438,ENSMUST00000074613 2 2 2 161 11 30532305 30533694 TTCAGAATGTACACAGAAGGAG 59 30406397 30406415 GATGCGAGAACTAGGACTC 59 NA Mus musculus 50 Slc4a4 ENSMUSG00000060961 ENSMUST00000113218,ENSMUST00000066831,ENSMUST00000113219 2 3 5 117 5 89457349 89457367 CTTGGGAGAGGAAGATGAC 59 89457448 89467488 AAACTTAATCCACCTCGCT 58 NA Mus musculus 50 Haghl ENSMUSG00000061046 ENSMUST00000077938 1 1 1 79 17 25920772 25920790 GTTTGCACAGAAAGTGGAG 59 25920509 25920527 TATCCTCGTCATCCCTCTC 59 NA DesignNoJunction Mus musculus 50 V1rh10 ENSMUSG00000061296 ENSMUST00000072044 2 1 1 61 13 22919236 22919254 TTCTACTGGGCAGATTGTG 59 22919193 22919213 AGGTTATTGTCCCTTGAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NM_175394.1 ENSMUSG00000061897 ENSMUST00000081000 1 1 1 127 2 178912285 178912304 GACTGGTTTAAGGGAATCTG 57 178912394 178912412 GGATTTGAGTAGTGCACTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr50 ENSMUSG00000061900 ENSMUST00000112948 1 1 2 100 2 36649588 36649606 GTACACTGTGGTTACACCC 59 36649670 36649880 AATACAGTCTCCTGCTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gm1082 ENSMUSG00000062132 ENSMUST00000080940 1 1 1 90 7 31304478 31304593 CTATCATGACCAACCTCCTG 59 31304646 31304664 TCAGCCAATAGCACATCAG 59 NA Mus musculus 50 Olfr909 ENSMUSG00000062621 ENSMUST00000074987 1 1 1 60 9 38331908 38331929 TAGAGATTCTAATCGTAGGTGG 58 38331947 38331968 GAGGTAAAGATGATAACACTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr298 ENSMUSG00000062878 ENSMUST00000077800 2 1 1 60 7 93637691 93637710 CATATGACCACTATGTTGCC 58 93637650 93637669 CCACTACTCATGATGGTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Klk1 ENSMUSG00000063903 ENSMUST00000075162 3 1 1 89 7 51484174 51484290 ACCCGTCAAATATGAATACCC 59 51484341 51484359 TTCTCTATGTGGGCTTTGG 59 NA Mus musculus 50 Trerf1 ENSMUSG00000064043 ENSMUST00000077951 3 1 2 82 17 47490827 47490845 CATCTCACAGTACCACCAG 59 47490890 47495874 GATCTTAAAGAAGACCTTGCC 58 NA Mus musculus 50 C530044N13Rik ENSMUSG00000065979 ENSMUST00000096272 3 1 2 82 16 11828315 11828334 GATGACGACTACTTCAACCT 59 11805661 11828270 AACACAGCTCTGATACCTG 58 NA Mus musculus 50 ENSMUSG00000066041 ENSMUSG00000066041 ENSMUST00000084243 3 1 1 109 4 132644215 132644233 AATGTCCATTCGTTGAGCA 59 132644305 132644796 AAATTCGTAGACCAGGATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Serpina1a ENSMUSG00000066366 ENSMUST00000072876,ENSMUST00000085056 1 2 2 137 12 105094020 105094038 CTGATGGATTATGCAGGCA 59 105093016 105093919 GATCTGGGCTAACCTTCTG 59 NA Nonspecific Mus musculus 50 Nrxn3 ENSMUSG00000066392 ENSMUST00000110138 3 1 4 185 12 90034161 90034180 ATCTCAAGTATGGCAACTCG 59 90034328 90071005 GACTGACATCTTCTGAGCA 58 NA Mus musculus 50 Onecut1 ENSMUSG00000066477 ENSMUST00000085342 1 1 1 85 9 74696943 74696961 CAAAGCTGAAAGCTTGTCG 59 74697010 74698616 CAATAGAATTCGCGAAGGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Krt77 ENSMUSG00000067594 ENSMUST00000087996 2 1 1 92 15 101694273 101694758 TGTTCTGAAGAAGGACGTG 59 101694199 101694217 TTCAGGAAGTTGATCTCCC 58 NA Mus musculus 50 Tcf15 ENSMUSG00000068079 ENSMUST00000089112 3 1 1 141 2 151974580 151974598 GAGAAGATTCCAGAAGCCC 59 151974703 151974721 AAATTTCTGCCTTGTCCCT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 LOC545547 ENSMUSG00000068887 ENSMUST00000107304 1 1 1 291 3 92593397 92594387 TGCTCCTGAATACTCACAG 58 92593124 92593142 GAGATCTGTGGTGTCTGTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 C330011K17Rik ENSMUSG00000069206 ENSMUST00000075255 3 1 2 88 13 67544262 67549766 ATTCCTCCAGGAACAACAG 59 67544192 67544210 TGAATTCTCTGGCATTGCA 59 NA Mus musculus 50 MGI:1316722 ENSMUSG00000070448 ENSMUST00000096793 1 1 2 81 14 52076099 52076120 TCTTCAACAAGTAGAGTCTCAG 59 52076160 52079638 ACACTGTTCTATATCTGCCTG 59 NA Mus musculus 50 Cited4 ENSMUSG00000070803 ENSMUST00000094814 2 1 1 218 4 120339899 120339917 GTTCGATTGCTTCTCAGAC 58 120340099 120340117 GAGACCCAACTGTCATCTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 NM_001037919.3 ENSMUSG00000070940 ENSMUST00000095015 1 1 1 88 5 10867348 10868630 TTACAATAGGACCAAGCCC 58 10868682 10868700 TATGCACAGAAGACAGGAC 58 NA Nonspecific Mus musculus 50 Olfr155 ENSMUSG00000071000 ENSMUST00000107860,ENSMUST00000095108 2 2 2 60 4 43868078 43868096 TGAGAAACAAGGACGTGAG 59 43868120 43868138 TCAGTTAGGTGTTTCTGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tas2r115 ENSMUSG00000071149 ENSMUST00000095394 2 1 1 60 6 132687744 132687763 TAAGACTGATTCAGACTGCC 59 132687703 132687723 CTGGTAGCAAACCATATACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cecr2 ENSMUSG00000071226 ENSMUST00000112686,ENSMUST00000100993,ENSMUST00000095525 2 3 3 91 6 120707702 120707843 CTATACAGGCTCCAGTTGG 59 120707898 120707916 TAAGGATGGGACATGTGAC 58 NA Mus musculus 50 Rpl23 ENSMUSG00000071415 ENSMUST00000103146 3 1 1 102 11 97639653 97639672 CGACAACGAAAGTCATATCG 59 97639470 97639588 TAGCAGAGCCTTTCATCTC 58 NA Nonspecific Mus musculus 50 Krtap26-1 ENSMUSG00000071471 ENSMUST00000095934 3 1 1 60 16 88647709 88647727 TGCTCTTCGACATACTGTG 59 88647667 88647685 AAGACGCAGGAATATAGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG546347 ENSMUSG00000071726 ENSMUST00000096371 2 1 1 135 X 89735399 89735417 GTTACAGGATGTTGAGCCA 59 89735516 89735534 CTCAACATCAGGTGTGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG238829 ENSMUSG00000071738 ENSMUST00000096389 2 1 1 60 X 73512489 73512507 TTTCGAATGTGCATATGGG 58 73512528 73512549 GAAAGTCTAAATGGATTGCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr31 ENSMUSG00000072707 ENSMUST00000100872 2 1 1 60 14 15161452 15161472 TTCTATACCATTCTCACACCC 58 15161493 15161512 CATCTTTGTTCCTCATGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Uprt ENSMUSG00000073016 ENSMUST00000087867 1 1 1 80 X 101693617 101693636 AGACTTGTTGTAGAAGAGGG 58 101693679 101694756 TTCATACTTGTGCCCTGTC 59 NA Mus musculus 50 EG667988 ENSMUSG00000073068 ENSMUST00000101396 1 1 1 60 X 88725848 88725866 GGATGAGCAACCTGTAGAG 59 88725890 88725908 GTGAACCTTGTACTTCCTG 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Gm851 ENSMUSG00000073574 ENSMUST00000097591 2 1 1 127 18 42151415 42151434 TTTCTTCATAGTCAGCACAC 57 42146239 42146257 TTGAATCTGTTAGCCAGCA 59 NA DesignNoJunction Mus musculus 50 MGI:1921842 ENSMUSG00000073773 ENSMUST00000069918 2 1 1 60 1 43517955 43517974 ACTCGGAACTCTTCATAGGA 59 43517997 43518015 TGGCCTCTGAAATTGTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074057 ENSMUSG00000074057 ENSMUST00000098356 3 1 1 115 7 86611753 86611771 GATCTGTCAATCTCTGGGT 58 86611850 86611868 GTCCCAGTTATTCACCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG434197 ENSMUSG00000074071 ENSMUST00000098378 2 1 1 80 7 75466721 75466739 TAAAGGAATCCTGGTGGTC 58 75466783 75474117 AGGACTGAACCTTCATGAG 58 NA Mus musculus 50 ENSMUSG00000074134 ENSMUSG00000074134 ENSMUST00000098469 2 1 1 60 8 101670629 101670647 AGGTTCATCTCCTGTTCTC 58 101670669 101670689 TAAAGAACTCCAACAGAACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Spint2 ENSMUSG00000074227 ENSMUST00000108235 1 1 3 66 7 30045429 30045447 AACACCACTGATGACATGG 59 30045140 30045399 CAAAGCAAACACTCAGGAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Zfp94 ENSMUSG00000074282 ENSMUST00000032673 1 1 4 153 7 25094206 25097408 CTTTGTTGGAGATGGTGAC 58 25088874 25088892 TCCTCAGGATTCTTGTCTC 57 NA InUTR Mus musculus 50 Q8BND0_MOUSE ENSMUSG00000074357 ENSMUST00000098781 2 1 1 64 8 48761183 48761201 AGAGTTTGGTTTAGGGAGG 58 48761229 48761247 TAAGATGGTTTGGGACTGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Psg23 ENSMUSG00000074359 ENSMUST00000057810 1 1 1 135 7 19192533 19195753 CATCTACAAGCTTGTGACAC 58 19192417 19192437 CAGACTCTGCTTATTGAAGAG 58 NA Mus musculus 50 Slc4a11 ENSMUSG00000074796 ENSMUST00000099362 3 1 1 81 2 130517178 130517196 TCAGATACCATCCAGGGAG 59 130516682 130517134 TCATGGTACAGATGATGCAG 59 NA Mus musculus 50 ENSMUSG00000074847 ENSMUSG00000074847 ENSMUST00000099425 1 1 1 75 13 65361434 65361452 CTCCTCAGGAATGACATCC 59 65361491 65361509 CTTCTCATCCAGGGAAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 BB181834 ENSMUSG00000074872 ENSMUST00000099452 2 1 1 60 2 124973313 124973333 CTTGGGACTTCTCATTATCAG 57 124973355 124973373 GGGCATGCTACTATATGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Grk6 ENSMUSG00000074886 ENSMUST00000001115,ENSMUST00000099482 1 2 2 80 13 55553188 55553500 TGAACAGTAGGTTTGTAGTGAG 59 55553540 55553559 CATTCATCAATGTCAGCACC 59 NA Mus musculus 50 Olfr73 ENSMUSG00000075140 ENSMUST00000099838 2 1 1 60 2 87874537 87874556 ACAGCTATAACCATCTTCCA 58 87874496 87874515 TCTTGGAGTTAGGTACACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000003311 ENSMUSG00000075437 ENSMUST00000100254 3 1 1 138 11 112654569 112657762 AGAAAGAGAATGTAATGGGACC 59 112654452 112654470 AAGGAAGGATAGGTTTGCC 59 NA InUTR Mus musculus 50 ENSMUSG00000075490 ENSMUSG00000075490 ENSMUST00000100346 3 1 1 103 11 104156622 104161613 TTAAGCTTGTTGCGTATCTG 58 104156538 104156558 CAGTCTTCACACCTTATTAGG 57 NA Mus musculus 50 Ifna5 ENSMUSG00000076440 ENSMUST00000107136,ENSMUST00000107135,ENSMUST00000102804 3 3 3 113 4 88481755 88481773 CAATGAAGTCCATCAGCAG 58 88481849 88481868 AAGTATTTCCTCACAGCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV16-104 ENSMUSG00000076522 ENSMUST00000103323 1 1 1 60 6 68375631 68375769 TCTGCTCTGGATATCAGGT 59 68375792 68375811 AAGATAAGATGGAGACTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV3-2 ENSMUSG00000076602 ENSMUST00000103403 2 1 1 262 6 70648766 70648784 ATTGTGCTGACCCAATCTC 59 70649009 70649028 ATTGCAGTATCATCCTCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRGV4 ENSMUSG00000076745 ENSMUST00000103554 3 1 1 60 13 19276911 19276930 CAGATGAGAATCCACTCCTG 59 19276952 19277078 CCATGTCCAAATGTCAAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV5D-4 ENSMUSG00000076791 ENSMUST00000103601 1 1 1 60 14 53621718 53621739 AACTACTTCCCTTGGTATAAGC 59 53621757 53621778 GAATGTCAATGATGAGCTTAGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRAV19 ENSMUSG00000076862 ENSMUST00000103674 2 1 1 61 14 54465334 54465352 AAATACCCTGACAACAGCC 59 54465375 54465395 TCCCTCTTATCCACATTTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-743a ENSMUSG00000077127 ENSMUST00000103939 3 1 1 61 X 64029975 64029993 CTGTATTCAGATTGGTGCC 58 64029932 64029950 TACTCTACTCAGCTTGGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-654 ENSMUSG00000077980 ENSMUST00000104787 2 1 1 61 12 110961433 110961452 TAAGTGGGAAGATGGTAAGC 59 110961476 110961494 TGGTCAGCAGACATATGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hmbox1 ENSMUSG00000078124 ENSMUST00000104924 3 1 1 65 14 65431990 65432008 TTACGTGTTCTGACCAGAC 59 65431943 65431962 ATTAGGCTGAATACCTGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mup1 ENSMUSG00000078673 ENSMUST00000080606,ENSMUST00000107477 1 2 2 81 4 61441854 61442633 CCATACTGTAAGAGATGAAGAG 57 61441794 61441812 CGTCACAGAATATTCACCA 57 NA Nonspecific Mus musculus 50 Nmd3 ENSMUSG00000078710 ENSMUST00000107787 1 1 1 60 3 69528692 69528710 CTGTGACTTCCCAGATAGG 58 69528734 69528752 AGGTCCACAGACAATTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Q3U0N9_MOUSE ENSMUSG00000079150 ENSMUST00000110900 3 1 1 84 14 76110736 76110755 ACTGTACACCATGTAAACTG 57 76110802 76110822 GTACAGTATACATCGTGCC 57 NA Mus musculus 50 Nat6 ENSMUSG00000079334 ENSMUST00000093785 2 1 1 60 9 107485267 107485286 CAAAGCTGACTCTAGATCCT 58 107485308 107485327 TTGGACAGGTTGAATCTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2AMP5_MOUSE ENSMUSG00000079481 ENSMUST00000113628 2 1 1 108 X 99277146 99277949 TACTGTGATACACAGGTCCA 59 99278018 99278038 ATCAGCTGTATTCTTCACTGG 59 NA Mus musculus 50 Ssxb1 ENSMUSG00000079705 ENSMUST00000037297 3 1 1 81 X 7993057 7993075 TGGAAACAGTGAGTTCCTG 59 7993120 7993593 ATATCCTGGAATGCCTTGC 59 NA Nonspecific Mus musculus 50 Gt4-1 ENSMUSG00000079844 ENSMUST00000056715,ENSMUST00000115809 2 2 2 105 16 13326634 13326652 CACTTACCCACTCTGAACG 59 13332160 13332723 TCTTATTATGTCCTGTGCTCAC 59 NA Mus musculus 50 EG627618 ENSMUSG00000079901 ENSMUST00000116017 1 1 1 65 17 19948990 19949009 ATGGCTAATGTTATCAAGGG 57 19949037 19949055 ATAAGAAGCTGGATCAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tcfe3 ENSMUSG00000000134 ENSMUST00000115679,ENSMUST00000077680,ENSMUST00000079542,ENSMUST00000115678,ENSMUST00000115680,ENSMUST00000115677,ENSMUST00000101695 2 7 7 81 X 7343973 7344574 GTACTCAAGGTTCAGACCC 59 7344619 7344637 AGTACTGTTTGACCTGCTG 59 NA Mus musculus 50 Hnrpd ENSMUSG00000000568 ENSMUST00000019128,ENSMUST00000112939 1 2 3 80 5 100392802 100392820 AGGTTACGGAGGTTATGGA 59 100391622 100392761 CTCTGCTGATTGCTATAATCAC 59 NA Mus musculus 50 Myo18a ENSMUSG00000000631 ENSMUST00000102488,ENSMUST00000092887,ENSMUST00000092886,ENSMUST00000100794 2 4 10 82 11 77667379 77671228 GGACCTCATCAACAGTGAG 59 77671274 77671292 TTGACAACCAGGACTTGAC 59 NA Mus musculus 50 Cd52 ENSMUSG00000000682 ENSMUST00000000696 3 1 2 74 4 133650849 133650870 CATTCTTCTGGTTGTGATTCAG 59 133649763 133649781 TTGTTAGTACCAGAAGCGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dnajc5 ENSMUSG00000000826 ENSMUST00000072334,ENSMUST00000108798,ENSMUST00000116365,ENSMUST00000108797,ENSMUST00000108796 3 5 5 82 2 181281182 181282051 AAAGTCCTATCGGAAGCTG 59 181282095 181282115 TCTCCTTAAACTTGTCTGCAG 59 NA Mus musculus 50 Mapk7 ENSMUSG00000001034 ENSMUST00000079080,ENSMUST00000108714,ENSMUST00000101085,ENSMUST00000116369,ENSMUST00000094119,ENSMUST00000101086 1 6 6 81 11 61306457 61306475 AACACGACAATATCATCGC 58 61305177 61306414 AGTACCACATAGACAGATCTG 58 NA Mus musculus 50 Pcbp3 ENSMUSG00000001120 ENSMUST00000001148,ENSMUST00000105411 1 2 3 82 10 76226125 76230616 CCAATGATCTTATAGGCTGC 58 76226062 76226080 TTTGATCTGAGCTCCAGAC 58 NA Mus musculus 50 Tnk1 ENSMUSG00000001583 ENSMUST00000094063 1 1 6 128 11 69666703 69668650 TTTCTGGAGTGACACTAGC 58 69666369 69666387 CTTGTAACGTTGCCTTCTC 58 NA Mus musculus 50 Coasy ENSMUSG00000001755 ENSMUST00000001806,ENSMUST00000107308 1 2 2 96 11 100946500 100946604 CCTTTGGAACAGATATTCTCC 58 100946851 100946869 GTGAGGATCTTCATCTGCT 58 NA Mus musculus 50 Slc39a13 ENSMUSG00000002105 ENSMUST00000111436,ENSMUST00000073575 1 2 4 149 2 90905756 90905774 AAGATGTTCCTCAACAGCA 59 90904950 90905069 ATAGCCACTGACTTTGAGG 58 NA Mus musculus 50 Ikzf4 ENSMUSG00000002578 ENSMUST00000105233,ENSMUST00000002653,ENSMUST00000105232,ENSMUST00000065334 2 4 4 111 10 128073774 128073792 ACAAACAGCAAAGTACCCT 59 128072962 128073699 TCACGGATTTCATCACCTG 59 NA Mus musculus 50 Lcp2 ENSMUSG00000002699 ENSMUST00000052413 1 1 2 88 11 33989609 33989627 TACAACATCCAAATCCGCT 59 33989678 33990581 GATACAGACAGGAAGTCCTC 58 NA Mus musculus 50 Pnkp ENSMUSG00000002963 ENSMUST00000107876,ENSMUST00000003044,ENSMUST00000098478 2 3 4 82 7 52115100 52115118 CCTTTGACCTAGATGGGAC 59 52115163 52115267 GTACAGAATCCTCCAGTCAC 59 NA Mus musculus 50 Stat3 ENSMUSG00000004040 ENSMUST00000103114,ENSMUST00000103113 3 2 3 107 11 100754424 100754443 ATTTGGAAAGTACTGTAGGC 57 100750846 100751209 TCAATGAATGGTGTCACAC 57 NA Mus musculus 50 Ppp1cc ENSMUSG00000004455 ENSMUST00000102528,ENSMUST00000086294 2 2 2 60 5 122618301 122618932 CACTCAAGATATGTGGTGAC 57 122618955 122618973 TATTCAAACAGACGGAGCA 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Sgce ENSMUSG00000004631 ENSMUST00000101677 1 1 4 101 6 4639609 4639627 ACACAGACAACTACGACAG 59 4627225 4628078 GAGATAACTCTGTAGTCTGCG 59 NA Mus musculus 50 Myo9b ENSMUSG00000004677 ENSMUST00000098648 1 1 2 89 8 73860785 73860804 CTAGACTTCTCCTTTGAGCG 59 73860856 73862818 GTTATGCAAATCGCTGCTC 59 NA Mus musculus 50 Emr1 ENSMUSG00000004730 ENSMUST00000004850,ENSMUST00000035851 1 2 4 84 17 57541399 57541417 TACTGCACCTGTAAACGAG 59 57541462 57541932 CGTTAACATCTTGACATTCCAC 59 NA Mus musculus 50 Psmd4 ENSMUSG00000005625 ENSMUST00000107237 1 1 2 143 3 94838493 94838511 AGTGCTGATCCTGAATTGG 59 94837676 94837847 GTCATCCGAGTCTTCAGTC 59 NA Mus musculus 50 Ncoa2 ENSMUSG00000005886 ENSMUST00000081713,ENSMUST00000068304 2 2 3 95 1 13157044 13157062 CAATGACCTCATGCAACTC 58 13152360 13156985 CCAATCATTCTGCTCTGTG 58 NA Mus musculus 50 Bcl2l1 ENSMUSG00000007659 ENSMUST00000007803,ENSMUST00000109820 1 2 4 73 2 152655189 152655207 CTGAATGACCACCTAGAGC 59 152607990 152608008 TTGTTCCCGTAGAGATCCA 59 NA DesignNoJunction Mus musculus 50 A2bp1 ENSMUSG00000008658 ENSMUST00000115841 2 1 4 188 16 7330489 7330507 ATCTTCCATGTACAGTGGC 59 7353148 7363966 TAAACAACACCGCCATAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Tex14 ENSMUSG00000010342 ENSMUST00000092806 3 1 4 81 11 87352095 87352113 GGCTCTTCTAACGTTTCTG 58 87352157 87356797 AATGCTTCTTATCTCTGGGT 58 NA Mus musculus 50 Cdh23 ENSMUSG00000012819 ENSMUST00000105464,ENSMUST00000105463 2 2 5 103 10 59949811 59949830 TTCAACAGCTCTGAGTACAG 59 59928896 59949745 AGACCCAAATCCTCATCCT 59 NA Mus musculus 50 Mtmr1 ENSMUSG00000015214 ENSMUST00000114602,ENSMUST00000015358,ENSMUST00000114601 3 3 8 100 X 68622989 68623008 TGTTGAATGGTGTAAACAGC 58 68623069 68636384 CCCTTAGAGCCTTGTAATCTC 59 NA Mus musculus 50 Mtap2 ENSMUSG00000015222 ENSMUST00000024639,ENSMUST00000114013 1 2 7 80 1 66448025 66448043 AGAAACAGCTAATCTGCCA 58 66448084 66458990 GTAAGTAAATCTTCCTCCACTG 58 NA Mus musculus 50 Mov10l1 ENSMUSG00000015365 ENSMUST00000109364,ENSMUST00000015509 1 2 2 80 15 88826618 88827112 CTGGATAGAGAATAAAGGGAAGG 59 88827150 88827170 CTAAACTGGTGTGCTTTATCC 58 NA Mus musculus 50 Matn4 ENSMUSG00000016995 ENSMUST00000103104,ENSMUST00000109359,ENSMUST00000109358,ENSMUST00000103103,ENSMUST00000059332,ENSMUST00000109362,ENSMUST00000109361,ENSMUST00000109360 2 8 8 60 2 164218859 164218878 CTCTCAGGATGACATTTCAG 57 164218717 164218836 ATACATGACGATGCCTTCC 59 NA DesignRelaxed Mus musculus 50 Nbr1 ENSMUSG00000017119 ENSMUST00000103099,ENSMUST00000103098,ENSMUST00000107208,ENSMUST00000107212,ENSMUST00000071537,ENSMUST00000107219,ENSMUST00000093932,ENSMUST00000107203 2 8 11 82 11 101433815 101433835 CTTTAATAGAGAAGCCAGGCT 59 101433879 101434132 TACAGTGGAATCAGGAGGT 59 NA Mus musculus 50 Elmo2 ENSMUSG00000017670 ENSMUST00000103091,ENSMUST00000074046,ENSMUST00000094329 1 3 5 125 2 165119753 165119771 GAAAGAGAAGAGTGCCCTG 59 165116045 165117607 TCAATCCAGATGCAGTACTC 59 NA Mus musculus 50 Cadps2 ENSMUSG00000017978 ENSMUST00000018122,ENSMUST00000069074,ENSMUST00000115357 3 3 8 80 6 23278894 23279029 AGCCTGTCAAGAATATCGC 59 23278832 23278851 TCTGTGGAAGATTAAGAGGC 59 NA Mus musculus 50 1700001P01Rik ENSMUSG00000018543 ENSMUST00000107576,ENSMUST00000018687 1 2 2 65 11 97634039 97634057 CTCAATAGGAGGAACTGGG 58 97633014 97633032 GTAGTAGTCGTGACCACTC 58 NA DesignNoJunction Mus musculus 50 Copz2 ENSMUSG00000018672 ENSMUST00000018816,ENSMUST00000107648 1 2 3 81 11 96715946 96716581 ATCTTAAGGAAGAACGTGGA 58 96716625 96716643 CATCGACAGTTTCATCCAG 58 NA Mus musculus 50 Sult4a1 ENSMUSG00000018865 ENSMUST00000082365,ENSMUST00000109463 1 2 2 104 15 83917119 83920401 ATGAATGACAAACTGGGCT 59 83917033 83917054 GTGCATGTCTTCATACTTAAGG 59 NA Mus musculus 50 Vta1 ENSMUSG00000019868 ENSMUST00000020018,ENSMUST00000100058 2 2 2 81 10 14387788 14387806 GTGGCATACAGATTCCTCC 59 14380946 14387743 TTACTCGTTACACCTGTGC 59 NA Mus musculus 50 Usp15 ENSMUSG00000020124 ENSMUST00000020334 1 1 3 131 10 122590180 122600663 TCCCTCTACTCCTAAGTCC 58 122583965 122583985 GACGGGAGACAATAATTTGAG 58 NA Mus musculus 50 Cyfip2 ENSMUSG00000020340 ENSMUST00000093166,ENSMUST00000093165 1 2 2 80 11 46084168 46086126 AAGAGAACAAGTCCAAGTGG 59 46084107 46084125 GGATCTGAACCATCTGCTC 59 NA Mus musculus 50 Efemp1 ENSMUSG00000020467 ENSMUST00000020759 2 1 2 82 11 28815711 28815730 ATTCTTGGCTCATTCATCTG 57 28815775 28816862 CATTCGTCGATGTCTTCAC 58 NA Mus musculus 50 Tubd1 ENSMUSG00000020513 ENSMUST00000020821,ENSMUST00000108030 3 2 3 92 11 86368794 86370204 AGAAATCCACTAGACTCTGGA 59 86370258 86370276 GAAAGATAGGTTGGTGGCA 59 NA Mus musculus 50 Rnf144a ENSMUSG00000020642 ENSMUST00000020971,ENSMUST00000062149 3 2 2 81 12 27012413 27012432 TAGAAACTGCAATTAGCTGC 58 27012187 27012370 GCAACCATACACTCAATCTC 58 NA Mus musculus 50 Myh10 ENSMUSG00000020900 ENSMUST00000102611,ENSMUST00000092984 1 2 4 120 11 68558905 68565446 AGGACCATAATATTCCTGGG 58 68565529 68573258 ATAAACTTGCCAAAGCGAG 58 NA Mus musculus 50 Kif13a ENSMUSG00000021375 ENSMUST00000056978,ENSMUST00000110121 1 2 2 80 13 46880666 46880686 ATCCTATCAGTATCCATTGGC 59 46874354 46880624 GTCTTCTTCCTGGTAGCTG 59 NA Mus musculus 50 Agtpbp1 ENSMUSG00000021557 ENSMUST00000022040,ENSMUST00000091573 3 2 3 81 13 59561977 59563365 GATACAAGGGTTTACAGATTGG 58 59561917 59561936 CGTTTCAAACGCAATAAACC 58 NA Mus musculus 50 Nsun2 ENSMUSG00000021595 ENSMUST00000109700,ENSMUST00000109699,ENSMUST00000022087 2 3 3 80 13 69751857 69751875 TTAAGGAGTTGGAGGACCT 59 69751918 69754306 CAAGTTCTTCAGGGTACCAG 59 NA Mus musculus 50 Oxsm ENSMUSG00000021786 ENSMUST00000022311,ENSMUST00000112625,ENSMUST00000112624 3 3 3 82 14 17074358 17074376 TTTGGGTTATGGACTCTCG 58 17073574 17074312 CAGCCATGCATCTTAAAGC 59 NA Mus musculus 50 Prkcd ENSMUSG00000021948 ENSMUST00000022521,ENSMUST00000112211,ENSMUST00000112210,ENSMUST00000112208,ENSMUST00000112207,ENSMUST00000112206 2 6 9 96 14 31409206 31411916 TAAGCCCAAAGTGAAATCC 57 31409128 31409146 GATGAGGTTCTTGTCACTG 57 NA Mus musculus 50 Mbnl2 ENSMUSG00000022139 ENSMUST00000088418,ENSMUST00000088419 1 2 3 104 14 120788378 120794944 CAGTCATGACTCAGTCGAC 59 120795696 120795715 CTTGTCTCTTTGGTAAGGGA 58 NA Mus musculus 50 Acin1 ENSMUSG00000022185 ENSMUST00000022793,ENSMUST00000111485,ENSMUST00000022794 2 3 5 80 14 55262607 55262625 ATGACCTCTTCCGTAAGAC 58 55261870 55262564 CCTCCTTCTGAACAATTTGG 58 NA Mus musculus 50 Q8VHV1-3 ENSMUSG00000022296 ENSMUST00000022905 2 1 1 83 15 38765558 38765576 CCAACTCACAGAACCTCAG 59 38780664 38780682 GCTTAGCATCCCTCTTAGC 59 NA DesignNoJunction Mus musculus 50 2700045P11Rik ENSMUSG00000022494 ENSMUST00000023138 2 1 1 63 16 11985218 11985236 AAAGGGAACACATGTCCAG 59 11994113 11994131 TAAACGGATTCTTCGTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Stxbp5l ENSMUSG00000022829 ENSMUST00000114787,ENSMUST00000114782,ENSMUST00000114780,ENSMUST00000114781,ENSMUST00000096074,ENSMUST00000114790,ENSMUST00000114789,ENSMUST00000023526,ENSMUST00000114778,ENSMUST00000114775 2 10 10 85 16 37330033 37345165 TATACGAATACTTGGGAGGC 58 37329967 37329985 TGATGAGGAATTGGAGCTG 59 NA Mus musculus 50 Eaf2 ENSMUSG00000022838 ENSMUST00000075946,ENSMUST00000114829,ENSMUST00000114825 3 3 3 92 16 36808158 36808177 GACTTCCAATCTTGTACAGC 58 36800915 36808103 GCTTCTGCTTTCAGTTCTC 58 NA Mus musculus 50 Epb4.1l3 ENSMUSG00000024044 ENSMUST00000112679,ENSMUST00000112678 1 2 6 121 17 69611629 69611647 CAGAAGGAAGAAGGCTGAG 59 69619996 69624053 TATCTAGATCCTCCGTGGC 59 NA Mus musculus 50 Bat3 ENSMUSG00000024392 ENSMUST00000087274,ENSMUST00000025250 2 2 2 91 17 35282104 35282122 GTGTGGATATCATCCGGAC 59 35282175 35282284 AAATCCACTGTCTGTACAGTG 59 NA Mus musculus 50 Eif4ebp3 ENSMUSG00000024483 ENSMUST00000037072 3 1 6 126 18 36813912 36815086 CAAACACATGTGACTCTCC 58 36815176 36815194 ATCTTTCGATCCTGACTGG 58 NA Mus musculus 50 Men1 ENSMUSG00000024947 ENSMUST00000113504,ENSMUST00000056391,ENSMUST00000113502,ENSMUST00000079327,ENSMUST00000113503,ENSMUST00000113500,ENSMUST00000078137 2 7 7 61 19 6338412 6338838 ATCCAAGACTACAACTACTGC 59 6338861 6338879 GCCACTTCAAAGAATTCCT 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Cbr2 ENSMUSG00000025150 ENSMUST00000026148,ENSMUST00000106147 2 2 2 103 11 120591632 120591753 AACTTGATCACCTACAGCTC 59 120591324 120591342 GGGTTTACGGAGTTTACCC 59 NA Mus musculus 50 Sufu ENSMUSG00000025231 ENSMUST00000111867,ENSMUST00000039922 3 2 3 124 19 46475634 46475655 TGGACTATGTTAGCATGTACAG 59 46475739 46499498 TCCTGTAAACTCATGGACTC 58 NA Mus musculus 50 Sufu ENSMUSG00000025231 ENSMUST00000111867,ENSMUST00000039922 1 2 3 122 19 46475635 46475655 GGACTATGTTAGCATGTACAG 57 46475739 46499497 CCTGTAAACTCATGGACTC 57 NA Mus musculus 50 Apex2 ENSMUSG00000025269 ENSMUST00000112725,ENSMUST00000112727,ENSMUST00000112720,ENSMUST00000026303,ENSMUST00000112719 1 5 6 96 X 147020578 147021593 CTATTCTGGTGTGGCTACC 59 147020500 147020519 AATATCTCCATTCAGGGTGG 58 NA Mus musculus 50 4933436I01Rik ENSMUSG00000025288 ENSMUST00000026325 3 1 1 60 X 65173231 65173249 TACACGAACAAGTAGCAGG 59 65173189 65173207 CTATGCATCCTTGCATCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Myo5b ENSMUSG00000025885 ENSMUST00000074157,ENSMUST00000114883 3 2 2 122 18 74904414 74918688 AGCCTATGATAGTTTCTGCC 59 74918773 74918791 CCAGGCAATACGAATTCTC 58 NA Mus musculus 50 Pip5k3 ENSMUSG00000025949 ENSMUST00000114042,ENSMUST00000081154 3 2 4 85 1 65238832 65238850 CTTAATGAGGAGCTCCACC 59 65239138 65242245 GCTTTCCTTCTGGAGTCTG 59 NA Mus musculus 50 Sema4c ENSMUSG00000026121 ENSMUST00000114992,ENSMUST00000114991,ENSMUST00000027295,ENSMUST00000114990,ENSMUST00000114995 1 5 5 80 1 36610613 36610632 CTTCAGCCATACAATTCCTC 58 36610404 36610570 GAGCATGTTGATGTAGGTG 58 NA Mus musculus 50 Dst ENSMUSG00000026131 ENSMUST00000088270,ENSMUST00000097785,ENSMUST00000097786,ENSMUST00000097789,ENSMUST00000115104,ENSMUST00000088216,ENSMUST00000115102 1 7 8 81 1 34209293 34209312 ATAACCTATGTGTCCTCCCT 59 34209356 34211367 CTTCAACATCGTTTGCACC 59 NA Mus musculus 50 Gpr39 ENSMUSG00000026343 ENSMUST00000027581 2 1 1 60 1 127574467 127574485 CTCACAAGGGACTCAACTG 59 127574509 127574527 GAGTTTCCAGGTTCATCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cdc42bpa ENSMUSG00000026490 ENSMUST00000111116,ENSMUST00000097451 3 2 5 101 1 181970244 181970264 ATAGATTGCCTGAAGAGATGG 59 181970327 181971005 CTGTCTCTGAGAACCTGTG 59 NA Mus musculus 50 Odf2 ENSMUSG00000026790 ENSMUST00000113763,ENSMUST00000028128,ENSMUST00000113764 1 3 13 100 2 29747778 29747796 ACCCAGTGTAACTGTTACG 59 29749027 29756609 AATGAGGTGGATTCTTGGT 58 NA Mus musculus 50 1700026L06Rik ENSMUSG00000026809 ENSMUST00000028152,ENSMUST00000102877 2 2 2 60 2 28549157 28549175 CAAAGCAATGACTTGAGCA 58 28547644 28547662 AAGCAACAGTACAGAAGCT 59 NA DesignNoJunction Mus musculus 50 Traf1 ENSMUSG00000026875 ENSMUST00000028234,ENSMUST00000113064 1 2 2 80 2 34802253 34802271 AAGATCACCAATGTCACCA 58 34801056 34802209 AGTGTAGAAAGCTGGAGAG 58 NA Mus musculus 50 Fcna ENSMUSG00000026938 ENSMUST00000028307 3 1 1 61 2 25480968 25480986 GTAATGACTACCTGCACCT 58 25480839 25480857 TTGTAAGTCAACTCGGAGC 59 NA DesignNoJunction Mus musculus 50 Nmi ENSMUSG00000026946 ENSMUST00000028314,ENSMUST00000112705 2 2 2 107 2 51808036 51808054 TCTGTAAGTCCAGGAATGG 58 51805596 51807965 AAATCTTGTCAACAACGCC 59 NA Mus musculus 50 4930525F21Rik ENSMUSG00000027209 ENSMUST00000110446,ENSMUST00000110448 3 2 4 138 2 125809491 125811999 ATAAACAACGTGTTGAGGC 58 125809371 125809390 TCTTCCACATTGTTGAAGTC 58 NA Mus musculus 50 Polr3f ENSMUSG00000027427 ENSMUST00000028914 2 1 2 81 2 144362118 144362912 ATCAGCAAGGTAGAGTTGTC 59 144362956 144362974 TAGTCATCTCCACTTTGCC 58 NA Mus musculus 50 Necab3 ENSMUSG00000027489 ENSMUST00000000895,ENSMUST00000109716 2 2 3 93 2 154381379 154381399 CAGAATTACTTTGCTGATGGG 59 154380648 154381327 CTGTCTCTAAATTGTCAGTGAG 58 NA Mus musculus 50 Zfp64 ENSMUSG00000027551 ENSMUST00000109162,ENSMUST00000087971,ENSMUST00000045842,ENSMUST00000109161 1 4 5 173 2 168777184 168777202 CAATCTGGATGCCTTTGTG 59 168766383 168777047 AACTCTGGAGCTGAAACTG 59 NA Mus musculus 50 Eif6 ENSMUSG00000027613 ENSMUST00000029142,ENSMUST00000109639,ENSMUST00000109638 3 3 3 86 2 155652133 155652151 TTCGAGAACAACTGTGAGG 59 155652065 155652084 ATAGAAGTTCTCTGAGCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ect2 ENSMUSG00000027699 ENSMUST00000108300,ENSMUST00000108298,ENSMUST00000029248,ENSMUST00000075155 3 4 5 81 3 27016749 27016769 TCTCTGAAGCACATTCATCTC 59 27014461 27016709 CATTGTGACAATCTTCTGTCTC 59 NA Mus musculus 50 Dclk1 ENSMUSG00000027797 ENSMUST00000054237,ENSMUST00000089805,ENSMUST00000107963 2 3 4 100 3 55051359 55051378 CGGATAATGTGAATTTGCCC 59 55051441 55059797 ATAGCTTTCACCTTCCACC 59 NA Mus musculus 50 G430022H21Rik ENSMUSG00000028114 ENSMUST00000029759 1 1 2 175 3 123076918 123076937 TTATATTTCTCTGGTGCGGT 58 123074395 123075484 GCAATGCTCCTTTGTTCTC 59 NA Mus musculus 50 Bnipl ENSMUSG00000028115 ENSMUST00000107195,ENSMUST00000029760 3 2 3 84 3 95048955 95048973 TTGCTTCCTGCTATCTACC 58 95048178 95048909 AAAGTTCCCACCATATACCTG 59 NA Mus musculus 50 Ppp3ca ENSMUSG00000028161 ENSMUST00000056758 2 1 3 80 3 136594997 136598003 TGATGAAGCCATCAAAGGA 58 136598046 136598065 TCGTTAATTCGGTCTAAGCC 59 NA Mus musculus 50 Lrrc7 ENSMUSG00000028176 ENSMUST00000106044 3 1 2 80 3 157819887 157823209 AAGGTTAGACAGGAATGCT 58 157819825 157819843 TGCATTGCTGAAATACCTC 58 NA Mus musculus 50 4930547C10Rik ENSMUSG00000028314 ENSMUST00000029995,ENSMUST00000107671,ENSMUST00000107673 1 3 3 60 4 52623250 52623268 CCAGACATCAAAGAAGACC 57 52623292 52623310 CTTGCTCAGTAGTTCTTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mpdz ENSMUSG00000028402 ENSMUST00000070461 1 1 4 82 4 80925591 80925609 GTCTAGAAGGAGTGACCCA 59 80925526 80925546 TTCAAGAGAAACCATGAGGG 59 NA Mus musculus 50 Tpm2 ENSMUSG00000028464 ENSMUST00000030184,ENSMUST00000107914,ENSMUST00000107913,ENSMUST00000034926 2 4 4 118 4 43532566 43532584 CATTCAGCTCGTAGAGGAG 59 43532362 43532485 CAATGACCTTCATTCCTCTC 57 NA DesignRelaxed Mus musculus 50 Ak3l1 ENSMUSG00000028527 ENSMUST00000102780,ENSMUST00000106946,ENSMUST00000030252,ENSMUST00000106945,ENSMUST00000106948,ENSMUST00000106947 3 6 6 81 4 101135658 101136161 CATCGAACTGTACAAGAGC 58 101136206 101136224 TGTGTAAACATAAGGCCAG 57 NA Nonspecific Mus musculus 50 Elavl4 ENSMUSG00000028546 ENSMUST00000106598,ENSMUST00000106601,ENSMUST00000102722,ENSMUST00000106603,ENSMUST00000106600,ENSMUST00000106594,ENSMUST00000001387,ENSMUST00000102723,ENSMUST00000106597 3 9 9 60 4 109923904 109923925 GAAATAGAATCCTGCAAACTCG 59 109899233 109899253 ATCCATACCCTAAACTCTGTC 58 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Dock7 ENSMUSG00000028556 ENSMUST00000107015,ENSMUST00000030286,ENSMUST00000075836,ENSMUST00000030282,ENSMUST00000097962 3 5 5 96 4 98670597 98674633 TGGCCAAATAGTTAATCTAGGG 59 98670522 98670540 ATGCTGGTCATGATTTCCT 58 NA Mus musculus 50 Podn ENSMUSG00000028600 ENSMUST00000044248,ENSMUST00000106709,ENSMUST00000106708 2 3 4 88 4 107690498 107691406 TTTCTCAGGTTCAACAAGCT 59 107690429 107690447 CCTTCAATGTCCAAGACCT 59 NA Mus musculus 50 Lrp8 ENSMUSG00000028613 ENSMUST00000106734,ENSMUST00000106732 2 2 5 112 4 107520912 107520930 TTTCAGTGTAAGAGTGGCG 59 107521006 107523928 AGACACTCATTTAGCCCAC 59 NA Mus musculus 50 Fusip1 ENSMUSG00000028676 ENSMUST00000030438,ENSMUST00000105853 2 2 4 60 4 135419110 135419448 CCTAGAAACAGTAGACCGA 57 135419472 135419490 TATCATTGTCGGAATGGCT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Mtf1 ENSMUSG00000028890 ENSMUST00000106193,ENSMUST00000030723 2 2 3 118 4 124516150 124519779 CAAGAACAAATTCAGCAAGC 58 124521414 124521433 ATGATCACAGGAACACTGAG 59 NA Mus musculus 50 Park7 ENSMUSG00000028964 ENSMUST00000105675,ENSMUST00000030805,ENSMUST00000105674,ENSMUST00000105676,ENSMUST00000105673,ENSMUST00000105677 2 6 6 99 4 150271571 150275126 ATGAATGGCAGTCACTACAG 59 150271491 150271510 CTAGTGCAAACTCAAAGCTG 59 NA Mus musculus 50 Mad2l2 ENSMUSG00000029003 ENSMUST00000084129,ENSMUST00000030860,ENSMUST00000105708 1 3 4 82 4 147518764 147518782 CTGCACATTTACAGTCCTC 58 147518828 147519222 ATGGGAAGTCCTTGATGAC 58 NA Mus musculus 50 Zcchc4 ENSMUSG00000029179 ENSMUST00000113901,ENSMUST00000113904 2 2 3 80 5 53210491 53214861 TGGAGAGCTAACAAAGCTG 59 53214905 53214923 TGGATTGTCCTTTAGTGCC 59 NA Mus musculus 50 Cit ENSMUSG00000029516 ENSMUST00000112006 3 1 6 158 5 116376299 116376484 TGATGGAGCAGGAAATGAC 59 116376606 116377857 TTCGCTTTAAGCTACTGCA 59 NA Mus musculus 50 Limk1 ENSMUSG00000029674 ENSMUST00000015137,ENSMUST00000111233 2 2 3 92 5 135138026 135140066 ATCAAGAACATGGACAGCC 59 135137708 135137727 GTTCATCGAATGGAGGTAGG 59 NA Mus musculus 50 Nt5c3 ENSMUSG00000029780 ENSMUST00000101367,ENSMUST00000031793,ENSMUST00000116607 3 3 3 82 6 56838393 56839465 CGAAGAAAGTTACTGCAGC 59 56838329 56838348 TAAGGGAACTTCTCTTCCAC 58 NA Mus musculus 50 Pira3 ENSMUSG00000030427 ENSMUST00000108605,ENSMUST00000090689,ENSMUST00000038176,ENSMUST00000073970 2 4 4 163 7 3866068 3866089 CAGTATAACATCTCTACAGGGA 58 3864790 3865944 TGGAGATTACCTGAGACCA 59 NA Mus musculus 50 Yif1b ENSMUSG00000030588 ENSMUST00000108238,ENSMUST00000032809 2 2 2 165 7 30029680 30029806 CTCTACATTCCAGCCATGG 59 30030761 30030779 TGACCAGGTAGAGACTGAG 59 NA Mus musculus 50 Pak4 ENSMUSG00000030602 ENSMUST00000108283,ENSMUST00000032823 3 2 2 171 7 29347568 29347586 GACTCTATCTTGCTGACCC 59 29345283 29345820 GTGACCAGATATCCACCTC 58 NA Mus musculus 50 Ush1c ENSMUSG00000030838 ENSMUST00000009667,ENSMUST00000107683 1 2 4 117 7 53464693 53465243 GATTCCTGAGATGACCACAG 59 53464595 53464613 GATGTCATCCAGGTCAGTG 59 NA Mus musculus 50 Frag1 ENSMUSG00000030990 ENSMUST00000098231,ENSMUST00000033292 2 2 4 121 7 109385055 109385652 CAGATCGCAAGTCCTACAG 59 109385737 109385925 GATGGTATACACTCCAGCC 59 NA Mus musculus 50 Pqbp1 ENSMUSG00000031157 ENSMUST00000033497,ENSMUST00000115655,ENSMUST00000115654 3 3 3 90 X 7472999 7473128 AATAATGCAGATGCTGAGGA 59 7472928 7472946 CTGGCTTCTCATGACTACG 59 NA Mus musculus 50 Pak3 ENSMUSG00000031284 ENSMUST00000070348,ENSMUST00000112868,ENSMUST00000112865,ENSMUST00000112864 1 4 6 80 X 140144226 140144246 TCTCTTCCTTCAGACTTTGAG 59 140144288 140149693 TTGCTCAGGAATTCCAGTG 59 NA Mus musculus 50 Rps6ka3 ENSMUSG00000031309 ENSMUST00000112493,ENSMUST00000033671,ENSMUST00000112500,ENSMUST00000112496,ENSMUST00000112491,ENSMUST00000112489 3 6 7 99 X 155765776 155766313 CCAAAGAGGTGATGTTCAC 58 155766373 155766394 TCTCTATAGATTATTCCCAGGC 58 NA Mus musculus 50 Ard1 ENSMUSG00000031388 ENSMUST00000114387,ENSMUST00000114389,ENSMUST00000033763,ENSMUST00000096316 2 4 6 112 X 71164879 71165105 ATGTCAGGAAGAGTAACAGG 58 71163212 71163230 CATTGCATACGCATCTTCC 59 NA Mus musculus 50 Irak1 ENSMUSG00000031392 ENSMUST00000114352,ENSMUST00000068286,ENSMUST00000114360,ENSMUST00000114339,ENSMUST00000033769,ENSMUST00000114354,ENSMUST00000114353,ENSMUST00000073369,ENSMUST00000101458 3 9 13 80 X 71267293 71267532 GCTATCAAGGTTTCGTCAC 58 71267231 71267252 CCATAAACAAGGCAGTATAAGC 59 NA Mus musculus 50 Irak1 ENSMUSG00000031392 ENSMUST00000114352,ENSMUST00000068286,ENSMUST00000114360,ENSMUST00000114339,ENSMUST00000033769,ENSMUST00000114354,ENSMUST00000114353,ENSMUST00000073369,ENSMUST00000101458 1 9 13 80 X 71267296 71267536 AACAGCTATCAAGGTTTCGT 59 71267235 71267254 AAACAAGGCAGTATAAGCCA 59 NA Mus musculus 50 2010004A03Rik ENSMUSG00000031750 ENSMUST00000076846 2 1 2 99 8 113272211 113272230 GATGGATGTACTTCTCGAGG 59 113266668 113272149 AATCTCCACATCCATGAGG 58 NA Mus musculus 50 Kirrel3 ENSMUSG00000032036 ENSMUST00000077837,ENSMUST00000045091 1 2 5 80 9 34831167 34831187 GACCATATACAACTGTACAGC 58 34831229 34835926 GGTACAGACTCTTGTTCCT 58 NA Mus musculus 50 Usp28 ENSMUSG00000032267 ENSMUST00000034805 3 1 2 81 9 48843993 48844011 CAGTATCATGAAGGTGGCT 59 48844053 48847095 ATTCAGCTCCTTATACTCTTCC 59 NA Mus musculus 50 Atp2c1 ENSMUSG00000032570 ENSMUST00000085133,ENSMUST00000038118,ENSMUST00000112558 1 3 4 81 9 105348499 105351164 CTATTAGTGTAAGCTTGGCTG 58 105348438 105348456 ATAACACCAAGGGCTAGAG 58 NA Mus musculus 50 Uba7 ENSMUSG00000032596 ENSMUST00000035216 2 1 2 174 9 107881772 107881875 CATCAACTGCTACCAACAG 58 107882012 107882102 CTCAAGCACTTTATCATGGA 57 NA Mus musculus 50 Bmp8a ENSMUSG00000032726 ENSMUST00000040496,ENSMUST00000102641 3 2 2 126 4 122993666 122994113 GGATCTTTGATGATGGCCA 59 122993160 122993178 TAATAGGCAGAGTAGCCCT 59 NA Mus musculus 50 Alox12b ENSMUSG00000032807 ENSMUST00000036424 3 1 2 81 11 68979548 68979744 CTGTATAAGCTTCTCATCCCTC 59 68979786 68979804 CTCCCTTGTTGAGAAGGAG 59 NA Mus musculus 50 Nfyc ENSMUSG00000032897 ENSMUST00000094813 2 1 4 111 4 120451828 120462991 CTTAACAGTGATGATCAGTGC 59 120451737 120451755 ACGCTTGTTATCCTCTGTG 59 NA InUTR Mus musculus 50 Clasp2 ENSMUSG00000033392 ENSMUST00000035088,ENSMUST00000111849 1 2 5 80 9 113682827 113682848 GGAGATTTATAGACACGTAGGA 58 113682887 113695693 ACCATTTCTAATCTAGCAGGG 59 NA Mus musculus 50 Pla2g4c ENSMUSG00000033847 ENSMUST00000108528,ENSMUST00000043612 2 2 2 89 7 13927771 13928731 GTTTATAGAAGGACCAGTGAC 57 13928781 13928800 TCTGTGAAATAAGCCATCAC 57 NA Mus musculus 50 Faah ENSMUSG00000034171 ENSMUST00000051237 2 1 2 138 4 115641786 115671441 CAACATTCTGAAGAAGGTGG 58 115641667 115641685 GAGGAGAGTATGGTCTTGG 58 NA Mus musculus 50 Nipsnap1 ENSMUSG00000034285 ENSMUST00000038570,ENSMUST00000093370,ENSMUST00000093371 3 3 3 92 11 4788945 4789109 AACAACAAGGAGTACCTGG 59 4789165 4789183 ATTCCAGAAGCTGAACTCC 59 NA Mus musculus 50 OTTMUSG00000008540 ENSMUSG00000034359 ENSMUST00000038386,ENSMUST00000106559,ENSMUST00000058791,ENSMUST00000106560 3 4 4 61 4 112289161 112289179 TTACACTTCCTCCAGATGG 58 112296623 112296641 CTCTGTAAGCCAGTCACTG 59 NA DesignNoJunction Mus musculus 50 4933407C03Rik ENSMUSG00000034390 ENSMUST00000039866,ENSMUST00000095172 3 2 2 85 8 119946794 119950394 AATTCTTCTGCAAGCACTG 58 119950442 119950461 TTTAAGGATCCTCTGAACCA 57 NA Mus musculus 50 A930041I02Rik ENSMUSG00000035236 ENSMUST00000090983 2 1 2 92 2 38980693 38988507 GGATAAATCAGATTTGCCTCAG 59 38980622 38980641 TGGAATTTCCAGAGTTTGGT 59 NA Mus musculus 50 Pmch ENSMUSG00000035383 ENSMUST00000048621 2 1 1 63 10 87554594 87554615 CTCAGCTAAATTTCCCATAGGA 59 87554892 87554910 GACTCTTCCCAGCATACAC 59 NA DesignNoJunction Mus musculus 50 Cox8a ENSMUSG00000035885 ENSMUST00000039758 1 1 1 119 19 7289955 7289973 ATATCACCATTGGGCTCAC 59 7289854 7289872 AAAGGATGAGGGAAGACTG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ibtk ENSMUSG00000035941 ENSMUST00000039213 1 1 2 80 9 85631122 85631141 GAAGGATTGTCACCTTTGGA 59 85628693 85631079 GACTTCTGTGGGATCAGTG 59 NA Mus musculus 50 Fbxw2 ENSMUSG00000035949 ENSMUST00000113080,ENSMUST00000028220,ENSMUST00000091020,ENSMUST00000113075 3 4 8 81 2 34678131 34678150 GAGACCTCTTCGTTAATTGG 57 34668521 34678087 CATCTGACCCTGTACAGAG 58 NA Mus musculus 50 Slc17a3 ENSMUSG00000036083 ENSMUST00000039721,ENSMUST00000110422 2 2 4 116 13 23938296 23938747 GTTCAAGGCTTAATGCAGG 59 23938826 23944227 CAATGTCATTCCTGACAAGG 58 NA Mus musculus 50 Sostdc1 ENSMUSG00000036169 ENSMUST00000041407 3 1 1 62 12 37040983 37041001 CATGTGGTTAAACCTGTCC 58 37041027 37041045 ATTCCTGGCTTGATTCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cd200r3 ENSMUSG00000036172 ENSMUST00000048479,ENSMUST00000077178 1 2 6 81 16 44957882 44957900 GTGAAACTGGCTGTAACTG 58 44957944 44965425 AGACTAAATCTCTGGAGCTG 58 NA Mus musculus 50 Gng12 ENSMUSG00000036402 ENSMUST00000043148,ENSMUST00000114228,ENSMUST00000114227,ENSMUST00000114226,ENSMUST00000114225,ENSMUST00000114224,ENSMUST00000114222 1 7 7 123 6 66965821 66967462 CCATCGAAAGAATAAAGGTCTC 58 66967546 66967564 TTCTTATCCTTGAACGGGT 58 NA Mus musculus 50 Cyld ENSMUSG00000036712 ENSMUST00000098519 2 1 4 110 8 91247100 91255581 ACATTGATGAAGCATTTGGG 59 91255654 91255672 GGATGCCTTTCTTCTTTCC 58 NA Mus musculus 50 Entpd8 ENSMUSG00000036813 ENSMUST00000044078,ENSMUST00000114380 1 2 4 98 2 24939809 24939827 ATTTCCTGAACCTCACGTC 59 24939889 24940261 GATAGCTGACTTCCACCAG 59 NA Mus musculus 50 Tmem149 ENSMUSG00000036826 ENSMUST00000108161,ENSMUST00000043850 3 2 2 197 7 31351942 31352166 AGCAGTGTAGAAAGAAGCC 59 31352327 31352345 ATATCAGAAGCAGCACCAG 59 NA Mus musculus 50 Syn1 ENSMUSG00000037217 ENSMUST00000115345,ENSMUST00000081893,ENSMUST00000041344 2 3 3 81 X 20442145 20442252 GCCTACATGAGGACATCAG 59 20442082 20442100 TGTCAGACATGGCAATCTG 59 NA Mus musculus 50 Hoxa9 ENSMUSG00000038227 ENSMUST00000048680 2 1 2 63 6 52175696 52175714 CATTAAACCTGAACCGCTC 58 52175651 52175669 CAAAGTGTGAGTGTCAAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rbbp7 ENSMUSG00000038344 ENSMUST00000041370,ENSMUST00000112316,ENSMUST00000112314,ENSMUST00000112315 3 4 4 206 X 159235739 159245433 AGAAATATGCTGATCTCCTGG 59 159228720 159228738 CCTGCTGCATATTCTCCTC 59 NA DesignRelaxed Mus musculus 50 Zfp384 ENSMUSG00000038346 ENSMUST00000100948,ENSMUST00000112427,ENSMUST00000088308,ENSMUST00000084275,ENSMUST00000112424 3 5 6 80 6 124983322 124985734 CTCTCCAATCTGCAGTCTC 59 124985778 124985796 TGTATATGCTCGGTGACAG 58 NA Nonspecific Mus musculus 50 Myst2 ENSMUSG00000038909 ENSMUST00000072621,ENSMUST00000107734,ENSMUST00000107733,ENSMUST00000092766 1 4 5 80 11 95164618 95167375 CAGAGTTCCCAAGATTCCA 58 95164556 95164575 CACCCTTCTGGTAGAATAGG 58 NA Mus musculus 50 Slco4a1 ENSMUSG00000038963 ENSMUST00000038259,ENSMUST00000038225 1 2 2 80 2 180199526 180200314 CTATATCGCCATCTTCTACAC 57 180200356 180200374 TAAACGTTTAGCATGGCTC 58 NA Mus musculus 50 F13a1 ENSMUSG00000039109 ENSMUST00000037491 2 1 3 110 13 37038479 37059897 GATCAGCAATGGTGAATGC 59 37038387 37038406 GAATGTCAACACTTCCTGTC 58 NA Mus musculus 50 Metrnl ENSMUSG00000039208 ENSMUST00000106089,ENSMUST00000100117,ENSMUST00000036742 3 3 3 70 11 121576061 121577059 AGTGACTTTGTTGTCCGAG 59 121577092 121577111 TAGATGACTGACACTTGCTG 59 NA DesignRelaxed, InUTR Mus musculus 50 Cntnap2 ENSMUSG00000039419 ENSMUST00000069147 2 1 3 95 6 45942072 45951178 AATCTAGGTTTCAACCAGCT 58 45951236 45951254 AATGAGTACAGAGTGCCAG 58 NA Mus musculus 50 Sdk1 ENSMUSG00000039683 ENSMUST00000085774,ENSMUST00000110794,ENSMUST00000074546 2 3 3 80 5 142413664 142424466 TTTCCATCATAGAGCCACC 59 142424508 142424528 GGATGTCCATAGTTTCTTCCA 59 NA Mus musculus 50 1110051M20Rik ENSMUSG00000040591 ENSMUST00000064652,ENSMUST00000094835,ENSMUST00000111344,ENSMUST00000102594 2 4 4 82 2 91122805 91124400 ATTACTCAGAATTCCTGGAGAG 59 91122744 91122763 TGGGACAATCACTGTATTGG 59 NA Mus musculus 50 Tmem146 ENSMUSG00000040828 ENSMUST00000112979 1 1 2 80 17 56793110 56793128 CTTCGACAAGTGTACAGTG 58 56793171 56793868 AGAAGTTCCACATTACATGG 57 NA Mus musculus 50 Phf8 ENSMUSG00000041229 ENSMUST00000046962,ENSMUST00000112662 1 2 6 84 X 148004901 148004919 AGGATGAGATCCCAGAGAC 59 148004964 148007966 CTCATGTTGAATTCAACCAGAC 59 NA Mus musculus 50 Ttc1 ENSMUSG00000041278 ENSMUST00000109278,ENSMUST00000048578 1 2 2 80 11 43552326 43553228 GATGAAACAGGACAAGAAGG 58 43551484 43551502 ATTGCACGGATATAGGTGG 59 NA Mus musculus 50 Hspb8 ENSMUSG00000041548 ENSMUST00000036991 3 1 1 64 5 116865427 116865446 TTGTCTCCAAGAACTTCACC 59 116859466 116859484 AAATACAGTGGCTGGATCC 59 NA DesignNoJunction Mus musculus 50 Rims1 ENSMUSG00000041670 ENSMUST00000097810,ENSMUST00000097809 1 2 7 120 1 22415952 22415970 AATGCCTACACATGACCAG 59 22394585 22411828 TTTCTGGAGTGCCTTTCTC 59 NA Mus musculus 50 Cdrt4 ENSMUSG00000042200 ENSMUST00000035854 1 1 1 60 11 62806456 62806475 ATGAGGAAACTTCCATTTGG 58 62806495 62806516 GCTAATCTTTGGTATGCATCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hecw2 ENSMUSG00000042807 ENSMUST00000087659 3 1 2 80 1 53883821 53884736 TGTTACAGTTTGTTACAGGC 58 53883760 53883780 ATCTTCTTGGACCATTACTCC 59 NA Mus musculus 50 Bclp2 ENSMUSG00000043873 ENSMUST00000066537 3 1 3 89 3 105822227 105826992 TGGTACAGGATTACATCATGAC 59 105822159 105822177 AGGTTTGTCCATATGCTGG 59 NA Mus musculus 50 4933404M19Rik ENSMUSG00000044122 ENSMUST00000078099,ENSMUST00000108317,ENSMUST00000100774 1 3 4 89 11 78017692 78018353 GAATCTAGGTGTAGAAGCCA 58 78018405 78018423 TTCCAGATCGTCATCTGTC 58 NA Mus musculus 50 Cnr1 ENSMUSG00000044288 ENSMUST00000057188,ENSMUST00000084736 3 2 2 60 4 34031104 34031123 CTACAGCTTTGTTGACTTCC 58 34031145 34031164 GAACAGAAACACATTGGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Wnk1 ENSMUSG00000045962 ENSMUST00000088644 1 1 4 80 6 119902007 119906098 TGGAACACAGGTAAGTACTC 58 119901946 119901964 TGAGTAGGTTGTGACTGTG 58 NA Mus musculus 50 5830418K08Rik ENSMUSG00000046111 ENSMUST00000098979,ENSMUST00000059410 2 2 4 91 9 15122180 15122199 CTGCCTACATCTTCAATGGA 59 15122028 15122126 CCTGATGTAGCTGAAGGTG 59 NA Mus musculus 50 BC048609 ENSMUSG00000047733 ENSMUST00000061460 2 1 1 60 19 6080230 6080248 ATGGGTGTCTTTGCTAGTG 59 6080272 6080290 TCATGTGGTCGTAGTTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC051628 ENSMUSG00000047841 ENSMUST00000050026 2 1 2 132 2 180956963 180956981 TATCAAGAGGGCAGAAAGC 59 180957273 180957291 CTTGTTCTAGAGTCCAGCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Mll2 ENSMUSG00000048154 ENSMUST00000023741 1 1 1 80 15 98672509 98672529 GCAGAAGTGAAGAGTTTAGAC 58 98672336 98672467 ACTCTCCATTCTGACATCC 58 NA Mus musculus 50 Nupl2 ENSMUSG00000048439 ENSMUST00000049887 3 1 2 85 5 23681276 23681294 CACAGACATTTCACCAGAG 58 23681340 23683830 GAACAGAGTTTAGATAGCTCTG 58 NA Mus musculus 50 Thnsl1 ENSMUSG00000048550 ENSMUST00000102952,ENSMUST00000102951 3 2 4 99 2 21131660 21134598 AGCTTGCTTGAAACTTTGG 59 21134661 21134679 ACGTGGTTCTGATTAGAGG 58 NA InUTR Mus musculus 50 Rtbdn ENSMUSG00000048617 ENSMUST00000067472,ENSMUST00000109740 1 2 2 80 8 87476624 87476643 GCTGTACTGCAGAGATAGAC 59 87476684 87476828 CCAGGAAGAATTCACATTCTG 58 NA Mus musculus 50 Slc35e4 ENSMUSG00000048807 ENSMUST00000109995,ENSMUST00000051207 3 2 2 87 11 3812569 3812588 CAAGTCTGTTCAACAAAGTG 57 3807920 3807938 GAAACTGGGCAAAGAAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Armcx3 ENSMUSG00000049047 ENSMUST00000086884 2 1 3 222 X 131291380 131291398 AAGATATTAAGTCCCGCCC 58 131292320 131292624 CTTTCTGATCTCTACTGATCCG 59 NA DesignRelaxed, InUTR Mus musculus 50 Suox ENSMUSG00000049858 ENSMUST00000054764 3 1 1 91 10 128109615 128109634 TATACAGATCCGTGGTTGTG 59 128109286 128109304 ATCATTTGTGGAGCATGCT 59 NA DesignNoJunction Mus musculus 50 BB146404 ENSMUSG00000049872 ENSMUST00000069125 2 1 1 60 10 33812241 33812259 ACGCTGCAGATCTAAAGTC 59 33812199 33812218 CCTTTGTGCATATGTCTTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Trpm3 ENSMUSG00000052387 ENSMUST00000099564,ENSMUST00000087569 1 2 7 80 19 22807650 22824268 AGATAAACACAAGATGCCTG 57 22824311 22824329 GGTCTAATTGGCAACTACC 57 NA Mus musculus 50 Nav2 ENSMUSG00000052512 ENSMUST00000064315 3 1 5 131 7 56502565 56617482 CCAGATCTACACGGATTGG 59 56617576 56627696 TTGTCATTTGCTACAACCTG 58 NA Mus musculus 50 Pcdh15 ENSMUSG00000052613 ENSMUST00000105426,ENSMUST00000092420 2 2 10 135 10 74089463 74089481 ATTCAGTCTGCTATGCCTG 59 74089579 74093260 AAAGATTATGCATTGCGCTC 59 NA Mus musculus 50 Rxfp2 ENSMUSG00000053368 ENSMUST00000065745 3 1 2 80 5 150859425 150862461 ATTTAGGAGAACTGGACCTG 58 150862504 150862522 TCTGGAGAAGATGAAGGTC 57 NA Mus musculus 50 Dnajc8 ENSMUSG00000054405 ENSMUST00000105940 1 1 5 93 4 132094196 132099981 CATTTGAGTTGTCCATCCT 57 132100572 132100590 TTGTAAGCTTTGTCCACAG 57 NA Mus musculus 50 Ugt1a1 ENSMUSG00000054545 ENSMUST00000097659,ENSMUST00000049289 3 2 11 262 1 90098047 90098065 ACTGTGTTACCAAGAAGCC 59 90112453 90112726 AGTCTTTGGATGACCAAGC 59 NA DesignRelaxed Mus musculus 50 Slc8a1 ENSMUSG00000054640 ENSMUST00000078779 3 1 4 81 17 81844252 81844270 GAAAGAGTGCAGTTTCTCC 58 81841544 81841562 AAGCTCATTCAACAACAGG 58 NA DesignNoJunction Mus musculus 50 1200003I07Rik ENSMUSG00000054648 ENSMUST00000110211,ENSMUST00000080987,ENSMUST00000110209 2 3 3 94 8 72232060 72232245 TGCCGTAGGATATGAATGG 58 72231568 72231587 TGTATTCAGAGTGAGTGACG 59 NA Mus musculus 50 Grik2 ENSMUSG00000056073 ENSMUST00000105487,ENSMUST00000105485,ENSMUST00000078692,ENSMUST00000079751 1 4 6 80 10 49124249 49139484 GTCTGGAGAAGATTGGGAC 59 49124187 49124206 TAATATTTGCTGGCTTCCCT 59 NA Nonspecific Mus musculus 50 Ticam2 ENSMUSG00000056130 ENSMUST00000070084 2 1 1 129 18 46732491 46732509 AATCACCGAATGGTAAGGT 58 46720652 46720670 TTTAGACTTCCCAACACCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Trim34 ENSMUSG00000056144 ENSMUST00000060315,ENSMUST00000106848,ENSMUST00000106849,ENSMUST00000106847,ENSMUST00000072555 1 5 8 80 7 111409010 111409414 CCTACTGGGACAACTTCAC 59 111409458 111409476 ATGTCACTTGTCTGTGGTC 59 NA Mus musculus 50 Skap1 ENSMUSG00000057058 ENSMUST00000103154 1 1 7 85 11 96574495 96574516 GACATTTATGAAGTCCTACCAG 58 96584709 96592454 TAATCGGCATAGTCCACTC 58 NA Mus musculus 50 Rpgrip1 ENSMUSG00000057132 ENSMUST00000111599 2 1 3 81 14 52760876 52760895 CTCCTGGACTTCAAGAACAG 59 52760938 52768899 TGAAATCACCAGATGTTGGA 59 NA Mus musculus 50 Arhgap24 ENSMUSG00000057315 ENSMUST00000094559,ENSMUST00000112855,ENSMUST00000112854,ENSMUST00000073302,ENSMUST00000112853,ENSMUST00000112852,ENSMUST00000070000,ENSMUST00000112849 1 8 8 80 5 103304839 103307470 AAGAAGCAGGTGTTAAGGA 58 103307513 103307532 TGCAAATGTACTTCAGAAGG 58 NA Mus musculus 50 Cacnb2 ENSMUSG00000057914 ENSMUST00000114723,ENSMUST00000065126,ENSMUST00000114719 1 3 6 80 2 14885540 14885558 GGAGGGAATTCATCATCCA 58 14885600 14889579 TATGTCTATAGCAGATGACGG 58 NA Mus musculus 50 Fgf18 ENSMUSG00000057967 ENSMUST00000109363,ENSMUST00000020507 1 2 2 109 11 33024690 33024708 GTGGAGACAGATACCTTCG 59 33018018 33024617 CTAGTACCATCAGGCTTCC 58 NA InUTR Mus musculus 50 Gcap14 ENSMUSG00000058690 ENSMUST00000111893,ENSMUST00000067700 2 2 3 83 14 37709494 37709514 GTCAGCAGAAATCTAAAGAGG 58 37692939 37709449 GTACTTGAGGAGGAATCCG 59 NA Mus musculus 50 1700018C11Rik ENSMUSG00000058935 ENSMUST00000102861,ENSMUST00000073768,ENSMUST00000102862 1 3 3 81 4 63268441 63269502 GTGATTATGAAGAGCTGACTG 58 63268380 63268398 CAGTGTTCCTGGTAGTAGC 59 NA Mus musculus 50 Krt40 ENSMUSG00000059169 ENSMUST00000074253 2 1 2 82 11 99402566 99402584 GCAAGTCAGATCTAGAGGC 59 99401540 99402520 GTTGACCTCCTCTTCATGG 59 NA Mus musculus 50 Rpl35a ENSMUSG00000060636 ENSMUST00000115079,ENSMUST00000078804,ENSMUST00000115078,ENSMUST00000115076 1 4 5 127 16 33057250 33057479 AAGTATGTCTGGAAGGCTG 58 33057570 33057588 AGAACTCCGTTTCATCTCG 59 NA Nonspecific, InUTR Mus musculus 50 H2-K1 ENSMUSG00000061232 ENSMUST00000025181,ENSMUST00000087189,ENSMUST00000046131 1 3 4 124 17 34133991 34134011 TGTGATGAAGATGAGAAGGAG 59 34133440 34133573 GAACCATCACTTTACAATCTGG 59 NA Mus musculus 50 Krt39 ENSMUSG00000064165 ENSMUST00000107445,ENSMUST00000076948 1 2 2 80 11 99380479 99381132 TGAGAGCCAACTATGAAGC 59 99380417 99380435 CATCCAGGATCTGCTTCAG 59 NA Mus musculus 50 D12Ertd647e ENSMUSG00000064215 ENSMUST00000085065,ENSMUST00000079294,ENSMUST00000066701,ENSMUST00000076702 2 4 5 91 12 104673712 104673730 AGATGACATCTTCAGCAGC 59 104674774 104674792 CTGTGTTAACAGGATGAGC 58 NA DesignNoJunction Mus musculus 50 Insl5 ENSMUSG00000066090 ENSMUST00000106869,ENSMUST00000084382 1 2 2 60 4 102699229 102699247 GGTGGAAGTAAGAAGCAGG 59 102699187 102699205 AACTGTTCTCACGTAGTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Xlr4b ENSMUSG00000067768 ENSMUST00000114506 3 1 4 153 X 70459699 70459717 GGTAAAGGGTTCTGAGGAG 58 70460148 70460575 ACAGGAATCCAAGTAGATTCC 59 NA InUTR Mus musculus 50 Uty ENSMUSG00000068457 ENSMUST00000069309 1 1 2 80 Y 471423 473302 GTAGAATACCAGGTCACCA 57 471361 471379 CAAACCATTCACAATCACC 57 NA Mus musculus 50 9930111J21Rik ENSMUSG00000069892 ENSMUST00000101295,ENSMUST00000093152 2 2 2 60 11 48853313 48864395 CTCAGGAACAGTACCATCG 59 48853271 48853289 GGGTGTAGAAGAGGAAGTC 58 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 Rnf213 ENSMUSG00000070327 ENSMUST00000093902,ENSMUST00000082107 1 2 2 84 11 119288976 119289338 GAACTTAAATAGAAGGCGGC 58 119289385 119289403 CAGCAGATCATCCCTTCTC 59 NA Mus musculus 50 Pramel4 ENSMUSG00000073724 ENSMUST00000105761,ENSMUST00000105760,ENSMUST00000105759,ENSMUST00000084191,ENSMUST00000091676,ENSMUST00000094520 1 6 6 63 4 143657011 143657029 TACTTCCTGAAAGAACGCC 59 143657845 143657863 TAAGGGTCTCTAATGGACG 57 NA Nonspecific, DesignNoJunction Mus musculus 50 OTTMUSG00000008953 ENSMUSG00000073763 ENSMUST00000097904 3 1 1 62 4 121656715 121656733 TTTGGCCAGTCTCTAAAGG 59 121656009 121656027 ATCCAGGACTTCTTTCTCC 58 NA DesignNoJunction Mus musculus 50 Wdr57 ENSMUSG00000074088 ENSMUST00000098405 3 1 2 136 4 130045474 130045492 TGTGGGATAGTGAAACTGG 58 130045590 130050597 GCCTTTAACCTTAACTGTACC 58 NA Mus musculus 50 Flt3l ENSMUSG00000074129 ENSMUST00000003516,ENSMUST00000085377 2 2 2 101 7 52389880 52390503 AATCTTCAGGACGAGAAGC 59 52389797 52389815 CGTTTGCATCTTAGACCCT 59 NA Mus musculus 50 Kcng1 ENSMUSG00000074575 ENSMUST00000109191,ENSMUST00000099069 1 2 3 75 2 168088211 168088229 AGAATGAGATGGCAGACAG 59 168088154 168088172 GTTGTCATGGTGATGACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sirpb1 ENSMUSG00000074677 ENSMUST00000108352,ENSMUST00000050623,ENSMUST00000108350,ENSMUST00000108349 2 4 4 60 3 15732458 15732940 CTGAGTTCATTCAAGTTCCA 57 15732417 15732435 TTCCATACCATTGTTGGCT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Pde11a ENSMUSG00000075270 ENSMUST00000111946 2 1 3 124 2 75869008 75869027 AAAGGAGACTACGATTGGAG 58 75865894 75867338 AATCCTCCAGAAAGCTGTC 59 NA Mus musculus 50 OTTMUSG00000012686 ENSMUSG00000075425 ENSMUST00000113810,ENSMUST00000113809,ENSMUST00000113808,ENSMUST00000100229 1 4 4 80 2 29619002 29619022 ATTAGTCGGGTATCACTTCAG 59 29619309 29619427 AGTCGATGAGAAAGTCTTGG 59 NA Mus musculus 50 TRAV6D-5 ENSMUSG00000076800 ENSMUST00000103611 1 1 1 60 14 53724932 53724953 CATACAATAAAGAAGCCACCTC 59 53724974 53724992 GAGTCTGACTCTTGCACTG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 0610010B08Rik ENSMUSG00000078886 ENSMUST00000109009,ENSMUST00000109008 3 2 4 95 2 175975202 175975223 GACCTATAAGAATCTCACAGCT 59 175975484 175976659 CTTTCATGCCTTCCATGAC 58 NA Nonspecific Mus musculus 50 Rab7 ENSMUSG00000079477 ENSMUST00000113598,ENSMUST00000113597,ENSMUST00000113596,ENSMUST00000113600,ENSMUST00000095048 2 5 5 61 6 87950518 87954176 GCCCTTAAACAGGAAACAG 58 87950475 87950493 TCCAGTTTGATGGGTTCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 A2BI73_MOUSE ENSMUSG00000079704 ENSMUST00000089372,ENSMUST00000115573 2 2 2 118 X 8094606 8094625 CTCTGGAGAGTATGATTCCA 57 8091201 8091221 CTTCAGGATCACTAATCTCTG 57 NA DesignNoJunction Mus musculus 50 mmu-mir-384 ENSMUSG00000065499 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-874 ENSMUSG00000077962 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Wdr77 ENSMUSG00000000561 ENSMUST00000010278 1 1 1 161 3 105767415 105767545 TCTTTCATGTAGTGAGGACAG 59 105768683 105768701 ACAGATCCATTCTCGTCAC 59 NA Mus musculus 50 Nola2 ENSMUSG00000001056 ENSMUST00000001083 3 1 1 99 11 51433460 51433479 CTACAAGTGCATCAAGAAGG 58 51433645 51435996 AACCATGATCCCTTTCTCG 59 NA Mus musculus 50 Fndc5 ENSMUSG00000001334 ENSMUST00000102600 2 1 1 134 4 128816778 128817096 GAACAAAGATGAGGTGACCA 59 128819324 128819342 ATGATATCATACTGGCGGC 59 NA Mus musculus 50 Tubb6 ENSMUSG00000001473 ENSMUST00000001513 3 1 1 113 18 67550987 67551005 AGTGATCAGTGATGAGCAC 59 67551080 67552612 ACGTACTTCTTAGAGGATGAC 58 NA Mus musculus 50 Blvra ENSMUSG00000001999 ENSMUST00000002064,ENSMUST00000099411,ENSMUST00000110389 1 3 3 80 2 126906384 126908675 TGAGTACTGAGCCAAAGAG 58 126908719 126908737 TCAAGTCCCTTATCCTCAC 57 NA Mus musculus 50 Snx9 ENSMUSG00000002365 ENSMUST00000002436 2 1 1 81 17 5908471 5908591 ACACCCACTAACACTAACC 58 5908636 5908654 CAAACTTAACCAGGAGACG 58 NA Mus musculus 50 Man1a ENSMUSG00000003746 ENSMUST00000003843,ENSMUST00000105470 2 2 3 94 10 53734286 53745523 TGTGAATGCTGAAGTTTCTG 58 53696914 53734230 TTCGAAATATCTCCTCTCCG 58 NA Mus musculus 50 Rad23a ENSMUSG00000003813 ENSMUST00000003911,ENSMUST00000109761 1 2 2 86 8 87362368 87362387 TCTCCAGAATCCATTTCTGG 59 87362023 87362179 AGAGCCAGTCACTAATGTG 58 NA Mus musculus 50 M6pr ENSMUSG00000007458 ENSMUST00000112610,ENSMUST00000007602 3 2 2 100 6 122266103 122266122 GTTTCTTATACCAGCGACTG 58 122266185 122266354 ACAACCATCAGCTACTAGG 58 NA Mus musculus 50 2310044H10Rik ENSMUSG00000008140 ENSMUST00000008284 1 1 2 145 7 51747537 51747555 CAATACATCTGTGCAGCTG 58 51746331 51747334 TGTACATCCAGTATTTGGCA 59 NA Mus musculus 50 Rab25 ENSMUSG00000008601 ENSMUST00000008745 2 1 1 174 3 88347306 88347324 GATTGTTGTCATGCTCGTG 59 88346282 88346631 TGCAAAGATCTCTTTGAGGA 58 NA Mus musculus 50 A2bp1 ENSMUSG00000008658 ENSMUST00000056416,ENSMUST00000096292,ENSMUST00000092375 3 3 4 170 16 7330523 7353031 TATACTTCTGCAATGCCTGG 59 7369898 7369918 ATACACTGGCTCTTGATACAC 59 NA Mus musculus 50 1700026D08Rik ENSMUSG00000011154 ENSMUST00000011298 2 1 1 108 7 90924661 90925589 TCTTCTTAAGGACCTACTTTGG 59 90924574 90924592 TTTCCAGTAACCAGCATCC 59 NA Mus musculus 50 Gltp ENSMUSG00000011884 ENSMUST00000012028 2 1 1 64 5 115119568 115119586 CTTAACCGTCCTTCTGGAG 59 115119522 115119540 TCAATTCTTTCAGGGCAGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ubxd5 ENSMUSG00000012126 ENSMUST00000070246 3 1 2 146 4 133665027 133665485 CGGAAATGAAGATGAGGTG 58 133679328 133679346 AGTTTGTCAAAGTCCACCT 58 NA Mus musculus 50 Msh3 ENSMUSG00000014850 ENSMUST00000022220,ENSMUST00000109520 1 2 3 100 13 92993133 92993151 GTTATCCTGGATGAGCTGG 59 92991027 92993071 GTTAAGGATTTCACGTCTCTG 58 NA Mus musculus 50 Rnd3 ENSMUSG00000017144 ENSMUST00000017288 1 1 1 97 2 51003814 51004245 AAATTACGTCCCTACGGTG 59 50992757 51003753 AAGGAGAACCTGAAGTGTC 58 NA Mus musculus 50 Myo1b ENSMUSG00000018417 ENSMUST00000018561,ENSMUST00000046390,ENSMUST00000114537,ENSMUST00000114541 2 4 4 80 1 51831201 51831220 TAGAGATTCCTGTGGAAGAG 57 51830211 51831161 CTTCTAGTTGGAATAATGTCCG 58 NA Mus musculus 50 Hars2 ENSMUSG00000019143 ENSMUST00000019287 3 1 1 80 18 36950199 36950217 TGGTCATTATTGGTGAGCA 58 36950259 36950733 TAATGGTCACTTCTTCTCTGC 59 NA Mus musculus 50 Uhrf1bp1l ENSMUSG00000019951 ENSMUST00000020112 1 1 1 80 10 89245414 89245433 GCAAAGTCTCTTAGTGAAGC 58 89245476 89249858 TGTAGAGCTCTGAGTAGGT 58 NA Mus musculus 50 Il20ra ENSMUSG00000020007 ENSMUST00000020185 3 1 1 104 10 19471304 19471322 CTCTGTATTGTGTCCACGT 59 19471389 19475606 ATGCTGATGTTTGAACTTCC 58 NA Mus musculus 50 6230410P16Rik ENSMUSG00000020258 ENSMUST00000112543 1 1 2 84 9 106059624 106059836 GAACATGCTGGAAAGAAAGAG 59 106059560 106059578 GATCCGGTAAGTTGTCCTC 59 NA Nonspecific Mus musculus 50 Ahsa2 ENSMUSG00000020288 ENSMUST00000020529,ENSMUST00000109539 2 2 2 81 11 23392295 23393288 CTCAAGACGGAATTTACAACAG 59 23392235 23392254 TCAGTTTCCTCTGAAGAGTC 58 NA Mus musculus 50 Madcam1 ENSMUSG00000020310 ENSMUST00000020554 3 1 2 81 10 79128491 79129091 AGGAGATTCCAGTACTACAG 57 79129135 79129153 GATGAGGTCAGGATGTAGG 58 NA Mus musculus 50 Prpsap2 ENSMUSG00000020528 ENSMUST00000004955 1 1 1 202 11 61554474 61554492 TAGGAATGCAGTCATCGTG 59 61548572 61550427 GAATCAGCATCGGGATCTC 59 NA DesignRelaxed Mus musculus 50 Atxn7l1 ENSMUSG00000020564 ENSMUST00000090597,ENSMUST00000073801 2 2 2 105 12 34010988 34026793 GATAAACCATGCGTTCCAG 58 34026861 34026880 CTGCAGTAGTGGTTGTAGAG 59 NA InUTR Mus musculus 50 Nle1 ENSMUSG00000020692 ENSMUST00000103213 1 1 1 80 11 82715108 82715127 ATATGCTGTTGACTGGAGTC 59 82714541 82715066 CATCTTCTCCATATCCGGAG 59 NA Mus musculus 50 Polg2 ENSMUSG00000020718 ENSMUST00000021060 1 1 1 171 11 106640290 106640308 AAACTTCTGGGAAACTACG 57 106638554 106638758 TCACCAACTCTTGTAACAC 57 NA Mus musculus 50 Tsen54 ENSMUSG00000020781 ENSMUST00000021134,ENSMUST00000106481 2 2 3 80 11 115681470 115681488 AATTTGGATGGTTATGCCC 58 115681531 115681705 CTTATTAACAGACCGACAGC 58 NA Mus musculus 50 Slc13a5 ENSMUSG00000020805 ENSMUST00000021161 3 1 1 87 11 72061324 72064239 AAAGGATGTGAGACGTCAG 59 72061255 72061273 TCAAGGTAATGACAGCAGG 59 NA Mus musculus 50 Mpp5 ENSMUSG00000021112 ENSMUST00000082024 2 1 1 81 12 79910875 79910893 TGTCACAGTACACATGAGC 59 79910935 79918236 AGTTTGTACCTCTTGTACAAGG 59 NA Mus musculus 50 Ptch1 ENSMUSG00000021466 ENSMUST00000021921 3 1 1 80 13 63626432 63628469 ATCGACATTAGTCAGTTGAC 57 63626371 63626389 CAGGTAGATGTAGAAAGCG 57 NA Mus musculus 50 Ccrk ENSMUSG00000021483 ENSMUST00000021939 2 1 1 70 13 64534389 64537434 CAGTCAATATGTGGTGCAG 58 64537468 64537486 TAAATTCGAAAGCCAGCAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Rnf180 ENSMUSG00000021720 ENSMUST00000062286,ENSMUST00000069686,ENSMUST00000022234 3 3 3 107 13 106039730 106039748 AAGCAAGTTGAGGACTCTG 59 105971742 106036748 TCATTACTCACGGTCATGTG 59 NA Mus musculus 50 Il6st ENSMUSG00000021756 ENSMUST00000070731 3 1 1 80 13 113280840 113283804 ATACGAAGACAGACCATCC 58 113283846 113283866 CGTACAGATCTATATTCCTGC 57 NA Mus musculus 50 Col14a1 ENSMUSG00000022371 ENSMUST00000110217 1 1 3 264 15 55333115 55347729 AGAACGAGGTCTAACTGGT 59 55350694 55350714 GTAATCATTGTACGGGATGAG 58 NA DesignRelaxed Mus musculus 50 Sla ENSMUSG00000022372 ENSMUST00000100572 2 1 1 82 15 66615314 66618615 GGTGACTCATTATTCTGAAGTG 58 66615253 66615271 TTGGAGCAGGTATGTTCTG 59 NA Mus musculus 50 Hoxc10 ENSMUSG00000022484 ENSMUST00000001699 1 1 1 104 15 102798024 102801233 GATAACGAAGCTAAAGAGGAG 57 102801298 102801317 CGTCTGGTGTTTAGTATAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Bop1 ENSMUSG00000022557 ENSMUST00000023217,ENSMUST00000100506 3 2 2 88 15 76285985 76286003 GACATCATGATCCACCCTG 59 76285840 76285933 ATTCGAGACACCTTCTCCT 59 NA Mus musculus 50 Yaf2 ENSMUSG00000022634 ENSMUST00000109264 1 1 2 60 15 93166797 93166815 CTTCAAGTGCATGATGTGC 59 93148024 93166773 TTCAGAGAATGTGGATCGG 59 NA DesignRelaxed Mus musculus 50 4932425I24Rik ENSMUSG00000022805 ENSMUST00000023501,ENSMUST00000114740 2 2 2 84 16 38324372 38328303 AGATTGAGAAACTGCAGGA 58 38324306 38324324 ATGTTCAGCTCATTCTGGT 58 NA Mus musculus 50 Ndufb4 ENSMUSG00000022820 ENSMUST00000023514 1 1 1 110 16 37649179 37649197 ATCCTAATTTCAGGCCCAC 59 37647793 37649105 TTTCCTTTCTGTCCCTGTC 59 NA Nonspecific Mus musculus 50 Atp5j ENSMUSG00000022890 ENSMUST00000114191 1 1 3 88 16 84831740 84834073 GAATGTTAGTACAGAGACTCAG 57 84831673 84831691 TTCAAATGCACAGAGACTG 57 NA InUTR Mus musculus 50 Kcnk5 ENSMUSG00000023243 ENSMUST00000024011 3 1 1 62 14 20964331 20965727 CATCGGTTATGGCAATGTG 59 20964287 20964306 CCGTAGAAGACACAGAAGAG 59 NA DesignNoJunction Mus musculus 50 Flywch2 ENSMUSG00000023911 ENSMUST00000024704 1 1 1 96 17 23916658 23916676 CTCAAGACTCATCCTGAGG 58 23914052 23916598 CTGGACCATCTGAATCCAG 59 NA Mus musculus 50 Man2a1 ENSMUSG00000024085 ENSMUST00000086723 1 1 1 80 17 65064044 65080554 ACATTCAGGGAATAGAAGGT 58 65080596 65080615 TTACAATCTCACGGTTATGC 57 NA Mus musculus 50 Zeb1 ENSMUSG00000024238 ENSMUST00000025081 3 1 1 81 18 5705231 5748699 GCAAGACAACGTGAAAGAC 59 5748742 5748762 CAGAAATTCTTCCACATTCGG 59 NA Mus musculus 50 Thoc1 ENSMUSG00000024287 ENSMUST00000025137 3 1 1 80 18 9962470 9962488 ATGTTGCTACTTGGAAGTC 57 9963303 9963832 TTCTGAGGAGATCATTGCA 58 NA Mus musculus 50 Ring1 ENSMUSG00000024325 ENSMUST00000025183 1 1 1 80 17 34159287 34159306 AGAGATTGAGCTTGTGTTCC 59 34158887 34159244 GTAGTCTTCACGTACCGAG 59 NA Mus musculus 50 Dsc2 ENSMUSG00000024331 ENSMUST00000075214,ENSMUST00000039247 1 2 2 80 18 20209723 20209741 TGCCTGTAAAGAAGTCGTC 59 20208691 20209679 CAGTCCATCAGGTTCACTC 59 NA Mus musculus 50 Gfra3 ENSMUSG00000024366 ENSMUST00000025224 3 1 1 119 18 34870857 34870875 CAACTCAGGAACAGCTCTC 59 34864214 34870774 CAACTCGTAGTCACCAAGG 59 NA Mus musculus 50 Ppp2r2b ENSMUSG00000024500 ENSMUST00000069341,ENSMUST00000025377,ENSMUST00000091918 2 3 3 80 18 42822816 42822835 ATGACCAGAGACTATCTGAC 57 42808411 42822773 GTCATGAACCTGGTATGTC 57 NA Mus musculus 50 Txndc10 ENSMUSG00000024614 ENSMUST00000025515 1 1 1 90 18 90680684 90680702 TCTGGCTGTTTGTAAAGGA 58 90683626 90686794 TGCATAGAAATCAACAAGCC 58 NA Mus musculus 50 Tnfrsf25 ENSMUSG00000024793 ENSMUST00000025706,ENSMUST00000035275 2 2 2 102 4 151493445 151493630 AACTCTTGGAACTCCTCTG 58 151493696 151493714 ATCCATCACATCGTAGAGC 58 NA Mus musculus 50 Rad9 ENSMUSG00000024824 ENSMUST00000025740 2 1 1 97 19 4196071 4196188 CCAAGAAGTTTCGTTCACTG 59 4195993 4196012 TTCACCATCACTGTCTTCAG 59 NA Mus musculus 50 Dusp21 ENSMUSG00000025043 ENSMUST00000026018 2 1 1 60 X 17723545 17723566 CAAGCTGTTTAGTAGGAATACC 58 17723584 17723605 GTTAGGAATCAGACCTATAGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tdrd1 ENSMUSG00000025081 ENSMUST00000111606,ENSMUST00000078723,ENSMUST00000111604 1 3 3 80 19 56940483 56940925 TCCACTAAAGAGATACCACAC 58 56941043 56941063 GAGAATCTGTTCGTGTTTCTC 58 NA Mus musculus 50 Katnal2 ENSMUSG00000025420 ENSMUST00000026486 1 1 1 80 18 77256358 77257933 CACAAGAAGGCTACATGGA 59 77256296 77256314 TGTCACAAACTTCAAAGCG 59 NA Mus musculus 50 Uqcrc1 ENSMUSG00000025651 ENSMUST00000026743 1 1 1 60 9 108844133 108844152 GACTGAGAAGAACAATGGAG 57 108844175 108846097 CTTTGTTCCCTTGAAAGCC 59 NA DesignRelaxed Mus musculus 50 Rdh10 ENSMUSG00000025921 ENSMUST00000027053 1 1 1 80 1 16121274 16121380 ACATTCATGAAGAGCATCCT 59 16121422 16121441 GGGATACATACACTTGTCCG 59 NA Mus musculus 50 Zfp142 ENSMUSG00000026135 ENSMUST00000113737,ENSMUST00000113739,ENSMUST00000027315,ENSMUST00000066986 2 4 5 81 1 74620166 74620184 TGAATGTGGCTATGTCACC 59 74619148 74620122 GCATTGGTATCTGAGATCCC 59 NA Mus musculus 50 Parp1 ENSMUSG00000026496 ENSMUST00000027777 3 1 1 80 1 182527448 182527466 GAGGTCATCAGGAAGTACG 59 182527507 182528350 CTTGAAGATATCGATCACTTCC 58 NA Mus musculus 50 Nvl ENSMUSG00000026516 ENSMUST00000027797 3 1 1 80 1 183027352 183029273 GTTGTAATTGCTATACGGGT 57 183027291 183027311 CTGTTATTTCTTGTCTCAGGG 58 NA Mus musculus 50 1810030J14Rik ENSMUSG00000026531 ENSMUST00000027816 2 1 1 115 1 176260763 176262339 AACAGACATGAAGGGAAAGG 59 176262416 176262435 AGGTCTTCATACACAGAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Esrrg ENSMUSG00000026610 ENSMUST00000110939,ENSMUST00000027906,ENSMUST00000110938 2 3 3 80 1 189974209 190022462 ACATATTCCAGGCTTCTCC 58 190022506 190022524 AGGATCAGAATCTCCATCC 57 NA Mus musculus 50 Vim ENSMUSG00000026728 ENSMUST00000028062 3 1 1 84 2 13501163 13501653 TTAAAGGCACTAACGAGTCC 59 13501700 13501718 GTGTCCTGGTAGTTAGCAG 59 NA Mus musculus 50 Plxdc2 ENSMUSG00000026748 ENSMUST00000028081,ENSMUST00000114703,ENSMUST00000114702 3 3 3 81 2 16591151 16591172 ACCGAGTAGAACTACAAATGTC 59 16591214 16591465 TTGAACTGGAGACATGTGG 59 NA Mus musculus 50 Odf2 ENSMUSG00000026790 ENSMUST00000113767,ENSMUST00000113763,ENSMUST00000113756,ENSMUST00000113757,ENSMUST00000113759,ENSMUST00000113758,ENSMUST00000113755,ENSMUST00000046571,ENSMUST00000028128,ENSMUST00000113762,ENSMUST00000113765,ENSMUST00000113766,ENSMUST00000113764 1 13 13 97 2 29770353 29770371 CTAAAGAAGGCCATCCGAG 59 29770432 29770738 ACATAAAGGTCCTTGTCGG 59 NA Mus musculus 50 Timm10 ENSMUSG00000027076 ENSMUST00000028470,ENSMUST00000111631 3 2 2 109 2 84667862 84669957 GTACAACAGAATGACCAGTG 58 84670029 84670047 ACTTGGATACACATCGGTC 59 NA Mus musculus 50 Eif3m ENSMUSG00000027170 ENSMUST00000028592,ENSMUST00000111110,ENSMUST00000111109 1 3 3 80 2 104839992 104840411 AAGTAGTTGTCAGTCACAGC 59 104839931 104839949 TCCAGGCATTAAGAGTGTC 58 NA Nonspecific Mus musculus 50 Ext2 ENSMUSG00000027198 ENSMUST00000028623,ENSMUST00000111249,ENSMUST00000111250 2 3 4 94 2 93570472 93579735 CTCCGGAAGAATCTCTGTG 59 93570396 93570414 GTCGTAAGGGAAGAAACGA 59 NA Mus musculus 50 F2 ENSMUSG00000027249 ENSMUST00000028681,ENSMUST00000111335 2 2 2 84 2 91468984 91469319 TTCCCGAACCAGATATGAG 58 91468918 91468936 CTCCCGCCAGTTATATCTG 59 NA Mus musculus 50 Mtch2 ENSMUSG00000027282 ENSMUST00000111470,ENSMUST00000111468,ENSMUST00000057216,ENSMUST00000111467 1 4 5 81 2 90695118 90695137 TCATTACACATCCCTTCCAC 59 90695633 90696971 CACAGTCCACAGTACTTAGAC 59 NA Mus musculus 50 Snap23 ENSMUSG00000027287 ENSMUST00000110711,ENSMUST00000116437,ENSMUST00000090016,ENSMUST00000028743 3 4 4 90 2 120410916 120411298 TTTAGCCATTGAGTCTCAGG 59 120411905 120411923 CATGCCTTCTTCTATGCGA 59 NA Mus musculus 50 Slc23a2 ENSMUSG00000027340 ENSMUST00000028815,ENSMUST00000110165 2 2 2 80 2 131917059 131919889 ATTGCAGAGAAGAGCTCTC 59 131916997 131917017 AGTGTAGATCATATCCGACCT 59 NA Mus musculus 50 Rpo1-2 ENSMUSG00000027395 ENSMUST00000103205,ENSMUST00000028874 2 2 2 96 2 128935105 128935126 CTTAACTATCTGGGAGAATGCT 59 128935183 128935786 AGATGCACTGGTTAAGCAG 59 NA Mus musculus 50 Bfsp1 ENSMUSG00000027420 ENSMUST00000099296,ENSMUST00000028907 2 2 2 91 2 143674727 143674745 CTTATTGCGTAACCTGCAC 59 143671717 143674675 CCAGAAGATTCTTCTTGTACCT 59 NA Mus musculus 50 D3Ertd300e ENSMUSG00000027751 ENSMUST00000029315 1 1 1 80 3 54510834 54510855 AGTCCAGTAATATGAAGTCTCC 58 54510895 54511025 CATCACAGACTAAAGTCTGC 58 NA Mus musculus 50 Wwtr1 ENSMUSG00000027803 ENSMUST00000029380 1 1 1 86 3 57305787 57378762 CCAGAGATACTTCCTTAATCAC 57 57305722 57305740 TTCACATGATTCAGAGGCT 58 NA Mus musculus 50 Eif2a ENSMUSG00000027810 ENSMUST00000029387 1 1 1 80 3 58348978 58349155 CCAACCTTATAAGGTGGCA 59 58349196 58349217 AAGTTGGGATACTGATACAGTC 59 NA Mus musculus 50 Gmps ENSMUSG00000027823 ENSMUST00000029405 1 1 1 80 3 63802629 63805444 GTGTTAAGAAGCCTCATACAC 58 63805485 63805504 TAATTTGCATGAGCTTCTCC 58 NA Mus musculus 50 Olfml3 ENSMUSG00000027848 ENSMUST00000029440 3 1 1 62 3 103540105 103540123 CACTCGAGATGATGACAGG 59 103540061 103540079 TCTGTGTCAAGTGTCTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mapbpip ENSMUSG00000028062 ENSMUST00000029698 1 1 1 209 3 88356422 88356718 TGCTGCTGAATAATGAGGG 59 88354662 88354680 TACATAGCAGAAGGTTGGC 59 NA DesignNoJunction Mus musculus 50 Nfkb1 ENSMUSG00000028163 ENSMUST00000029812,ENSMUST00000106276,ENSMUST00000106275 3 3 3 80 3 135266721 135266739 GGATGTGAAGATGTTGCTG 58 135264490 135266678 GCTAAGTGTAAGACACTGTC 57 NA Mus musculus 50 1810030N24Rik ENSMUSG00000028295 ENSMUST00000029972,ENSMUST00000108134,ENSMUST00000108131,ENSMUST00000108132,ENSMUST00000108133 3 5 5 91 4 34716385 34718514 TTAAACCCAACAAACCTGTG 58 34716313 34716331 GTTCTCTTGAGTTGCATGC 59 NA Mus musculus 50 Spink4 ENSMUSG00000028415 ENSMUST00000030122 2 1 1 106 4 40876195 40876213 AAATGAATGCCACCTTTGC 59 40878347 40878366 GAAGTTTCATGGCTTGAGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 5830433M19Rik ENSMUSG00000028578 ENSMUST00000030313 3 1 1 80 4 94215858 94215877 GGTTTGGACTCTGATATGGA 58 94187814 94215815 ACAGGTATCTTGCTGACTG 58 NA Mus musculus 50 Mobkl2c ENSMUSG00000028709 ENSMUST00000030477 3 1 1 141 4 115506315 115506334 TACATCCACCACTTTGACAG 59 115506438 115506742 GTTCTGTCATCTCCCTCAG 59 NA Mus musculus 50 Ddost ENSMUSG00000028757 ENSMUST00000030538 3 1 1 81 4 137866600 137866618 CTCTGGATTTCTTCAGCGA 59 137866662 137866770 CCTGTCTGAGAATACCTCTG 58 NA Mus musculus 50 Hp1bp3 ENSMUSG00000028759 ENSMUST00000105827,ENSMUST00000105826,ENSMUST00000105825,ENSMUST00000030541 2 4 4 60 4 137796601 137796620 ACGATGAATCATCAGAAGAC 57 137796643 137797369 TTCTGTAAGCTCCTCTTGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Zfp362 ENSMUSG00000028799 ENSMUST00000071108,ENSMUST00000106072 3 2 2 110 4 128464216 128464235 AAAGATCAAGGCAGAGAACC 59 128463427 128464145 CAGACCTTACACCTGTATGTC 59 NA Mus musculus 50 Lrrc47 ENSMUSG00000029028 ENSMUST00000030894 1 1 1 80 4 153393528 153393546 TCTTGGAAGTAACGAGTGC 59 153393590 153393755 TCAGTTCTGCCATTCTCAG 59 NA Mus musculus 50 Gfi1 ENSMUSG00000029275 ENSMUST00000065478,ENSMUST00000031205 1 2 2 140 5 108149183 108149201 TATCCCTGTCAGTACTGTG 57 108146870 108146888 ATGAGTGATGAGGTTGGAG 58 NA DesignNoJunction Mus musculus 50 Anapc5 ENSMUSG00000029472 ENSMUST00000086216 2 1 1 60 5 123257339 123257358 AGAAGGAATTGAACAACCTG 58 123256434 123257316 CTGAGGTAATGAGCTTCAG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Gngt1 ENSMUSG00000029663 ENSMUST00000031673 2 1 1 61 6 3944277 3944296 GGTAGACCAGCTTAAGAAGG 59 3944319 3946670 CTTCACAACATTTGGAAACC 57 NA DesignNoJunction Mus musculus 50 Hyal4 ENSMUSG00000029680 ENSMUST00000031691 2 1 1 81 6 24713872 24715700 TAACTTCATCTGAGGAGAACTG 59 24715739 24715760 CTGGTCACATTGATTATGTAGC 59 NA Mus musculus 50 Spam1 ENSMUSG00000029682 ENSMUST00000031693 1 1 1 118 6 24746999 24747812 TCTAGAGGATGACCTTGTG 57 24750311 24750329 TATGTAGGATTGGGCAACC 59 NA DesignNoJunction Mus musculus 50 Cyp3a13 ENSMUSG00000029727 ENSMUST00000031741 2 1 1 80 5 138352817 138352837 CAGTTTACAGATGTGTTGGTG 59 138351283 138352776 CCCAAAGATGTCTTTCATGC 59 NA Mus musculus 50 Wdr54 ENSMUSG00000030032 ENSMUST00000032108 2 1 1 81 6 83105111 83105129 TGTATGAGTCTGATGGCTC 58 83104954 83105066 GCAAACATAGCCTGTACTG 58 NA Mus musculus 50 Lrrc23 ENSMUSG00000030125 ENSMUST00000032218,ENSMUST00000112475 3 2 2 101 6 124724497 124726103 GAAGAATCTCTACCTGGCTC 59 124724415 124724434 GTTTCAATCTGGTTGTCTCG 59 NA Mus musculus 50 Wnt5b ENSMUSG00000030170 ENSMUST00000032273 1 1 1 236 6 119390585 119396363 TATGCAGATAGGTAGCCGA 59 119390367 119390385 AAGTTCTTCTCACGCTCTC 59 NA DesignRelaxed Mus musculus 50 Art4 ENSMUSG00000030217 ENSMUST00000032341 1 1 1 101 6 136802885 136802903 ATGAGCACGTATAACTGCC 59 136798138 136798157 CGAGATAACAACAGTGACCA 59 NA DesignNoJunction Mus musculus 50 Pik3c2g ENSMUSG00000030228 ENSMUST00000032353 1 1 2 120 6 139582208 139582227 TGTCAAAGACCTAATTGCTG 58 139582308 139584105 CTCAGGGTAGTTAATGATCTG 57 NA Mus musculus 50 Apba2 ENSMUSG00000030519 ENSMUST00000032732,ENSMUST00000107507,ENSMUST00000096173 3 3 3 99 7 71890689 71894993 GTGCAGAATGGAATCATCTG 58 71895055 71895073 CACTCTGTCCGTTGATCTC 59 NA Mus musculus 50 Rhcg ENSMUSG00000030549 ENSMUST00000032766 1 1 1 80 7 86748676 86748696 TGCTCATTATGACCTTCTTCC 59 86746611 86748635 CATCCTTTGCCTCTATCAGG 59 NA Mus musculus 50 Ccdc90b ENSMUSG00000030613 ENSMUST00000032842,ENSMUST00000085017 1 2 2 80 7 99723257 99723275 GAAACCAGTCGAATCAGAG 57 99723318 99723850 TTGATCTGTGAACATGTCTG 57 NA Mus musculus 50 Lyrm1 ENSMUSG00000030922 ENSMUST00000106518,ENSMUST00000054440,ENSMUST00000106517,ENSMUST00000106516 1 4 4 71 7 127053473 127057701 AAATCTCACAGACCCAGAG 58 127057736 127057754 TGCAGTCCAATCTCAATCC 59 NA DesignNoJunction Mus musculus 50 Acsm5 ENSMUSG00000030972 ENSMUST00000066465 2 1 1 80 7 126681608 126681627 TGTGGCAATTCAAGAAACTC 58 126681669 126681810 ATCTACAATCTGCACATCGT 59 NA Mus musculus 50 Pak3 ENSMUSG00000031284 ENSMUST00000033640,ENSMUST00000070348,ENSMUST00000112868,ENSMUST00000112865,ENSMUST00000112864,ENSMUST00000112863 1 6 6 83 X 140150680 140167621 GCACATCAGTCGAATACCA 59 140167666 140167686 CTCTTCCTCTTCTTCATCCTC 59 NA Mus musculus 50 Hccs ENSMUSG00000031352 ENSMUST00000112115,ENSMUST00000033717 2 2 2 85 X 165751598 165753543 TTCATGCTCATGAGTGTCC 59 165751531 165751549 ACGAATTCTTGCTCTTGGT 59 NA Mus musculus 50 Avpr2 ENSMUSG00000031390 ENSMUST00000101470 2 1 3 60 X 71140456 71140474 CATTCCACCTTCCTTCCTC 59 71140496 71140516 ACCAAGAAGTTACTATCCCAC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Cul4a ENSMUSG00000031446 ENSMUST00000016680 3 1 1 80 8 13144360 13144379 AATGAGGAAGACACTTGGTC 59 13144422 13146542 AAATCTCCAGGCTTCACTG 59 NA Mus musculus 50 Ggn ENSMUSG00000031493 ENSMUST00000098609,ENSMUST00000033886,ENSMUST00000071601 3 3 3 207 7 29958033 29958052 TTTCGAGGTGCTTAATTCCT 59 29958877 29958895 CACTCAGGTAGAATGGGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 1700018L24Rik ENSMUSG00000031512 ENSMUST00000033909 2 1 1 90 8 11844183 11844201 CTACAATGTCACCAGGGAG 59 11844253 11853135 CTGTACATAAATGGGAACAGC 59 NA Mus musculus 50 Lsm6 ENSMUSG00000031683 ENSMUST00000051867 2 1 1 68 8 81333886 81333905 AGTATGTAAATGGACAGCTG 57 81332136 81333855 TGTACAGCACATTGTTTCC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Gpt2 ENSMUSG00000031700 ENSMUST00000034136 3 1 1 80 8 88047256 88049442 TTACCACTTCAGAATGACCA 58 88049484 88049503 TTCAGGTGAAAGTCTTTCAC 57 NA Mus musculus 50 Mast3 ENSMUSG00000031833 ENSMUST00000037986 1 1 1 80 8 73308510 73308640 ACAGGTTGTCAGTGATGAG 59 73308448 73308466 AGCCTAGTAATCAGGTCCT 58 NA Mus musculus 50 Comp ENSMUSG00000031849 ENSMUST00000003659 3 1 1 80 8 72901092 72901113 GATCAGAAAGATACAGACCTGG 59 72901153 72902529 AGCTACATTTCGTATTCGGT 59 NA Mus musculus 50 Vps26b ENSMUSG00000031988 ENSMUST00000034470 2 1 1 136 9 26827007 26827025 TGTGTCTTTGGTGAAGGAC 59 26822893 26826907 CTCGAAGGAAATAGCGGAG 59 NA Mus musculus 50 Kcnj5 ENSMUSG00000032034 ENSMUST00000034533 1 1 1 86 9 32125481 32129677 TAGAAGCAACAGGCATGAC 59 32125413 32125431 TGAGAACTGGTGTGAATCG 59 NA Mus musculus 50 Dscaml1 ENSMUSG00000032087 ENSMUST00000054307 2 1 2 95 9 45358671 45358689 CCATTCTCCAGGGTTTGAG 59 45358746 45359773 GTTCCTTTGATTCCTTTCTGC 59 NA InUTR Mus musculus 50 Ulk3 ENSMUSG00000032308 ENSMUST00000053230 2 1 1 81 9 57438259 57438473 GAAAGACTTCCAGTGGGAC 59 57438518 57438536 ATGAATGAAGCGAGACAGG 59 NA Mus musculus 50 Tfdp2 ENSMUSG00000032411 ENSMUST00000034982,ENSMUST00000112962 1 2 2 98 9 96217912 96217931 TTCTTGGTTAAATCAGGGAC 57 96217992 96218215 TGGTTTACACTTGATTGGG 57 NA Mus musculus 50 Syde1 ENSMUSG00000032714 ENSMUST00000040580 3 1 1 107 10 78050148 78050167 AGTGAAGAAAGAGCTTCGAG 59 78049849 78050078 TAATCCTTGAGGATGCCTG 58 NA Mus musculus 50 P2ry2 ENSMUSG00000032860 ENSMUST00000037540 3 1 1 110 7 108152126 108152144 GAGTGAAGAACTGGAGCAG 59 108147571 108147590 CATTGATGGTGCTATTCCAG 58 NA DesignNoJunction, InUTR Mus musculus 50 Fa2h ENSMUSG00000033579 ENSMUST00000038475,ENSMUST00000093130,ENSMUST00000109156 2 3 3 97 8 113880045 113880063 TATGATGAGTGGGTTCACC 58 113879395 113879984 GGGACACTATACCAGACAG 58 NA Mus musculus 50 St18 ENSMUSG00000033740 ENSMUST00000115503,ENSMUST00000115501,ENSMUST00000043578,ENSMUST00000115499,ENSMUST00000115497 1 5 5 80 1 6785650 6792412 CACTGCAGATGAAATCATGG 59 6792455 6792473 TCTTTCTTCTGGAGTGAGC 58 NA Mus musculus 50 Alg3 ENSMUSG00000033809 ENSMUST00000045918 1 1 1 80 16 20606649 20606667 AAAGTATTCTGGCACTGCT 59 20606068 20606606 TGGAAACAATCTGGTTAGGT 58 NA Mus musculus 50 Lsm3 ENSMUSG00000034192 ENSMUST00000040607 2 1 1 113 6 91467050 91467068 CACCAATACCGTAGAGGAG 58 91467143 91469553 TGATCATAAGCGTGTAGTCTG 59 NA Mus musculus 50 Zfyve9 ENSMUSG00000034557 ENSMUST00000106657,ENSMUST00000106658,ENSMUST00000106660,ENSMUST00000042185 3 4 4 80 4 108361800 108361819 GTGCAATGAACCTTATTCCT 58 108357622 108361757 CTTCCACAGCATAATCTCC 57 NA Mus musculus 50 Gns ENSMUSG00000034707 ENSMUST00000040344 2 1 1 81 10 120827715 120827733 GCTGGTGGAATATCAAGGA 59 120827777 120828435 GAAACATTGAGACACTCCAG 58 NA Mus musculus 50 Pygo1 ENSMUSG00000034910 ENSMUST00000038489 1 1 1 106 9 72773761 72790738 GTTAGAGGTGGTGACAGTG 59 72790808 72792488 GGAAAGGAAGATCCCTGTG 59 NA Mus musculus 50 3110056O03Rik ENSMUSG00000035206 ENSMUST00000035597 3 1 1 90 10 80325761 80325780 ACATGGTCATCATCTTTGTC 57 80325832 80325936 TGCTTCATGTACTTCTTCAC 57 NA Mus musculus 50 Impg2 ENSMUSG00000035270 ENSMUST00000069778 2 1 3 264 16 56204715 56205209 TTGTATCAGCCTCAGAAGAG 58 56211344 56211362 TTCTTGTCAGTTGTGGGTC 59 NA DesignNoJunction Mus musculus 50 1700072E05Rik ENSMUSG00000035454 ENSMUST00000047945 1 1 1 60 X 83290143 83291888 AGATTTGCTGTGTCAAAGG 58 83291912 83291930 CTGTTAGGCTGCAAATGAG 58 NA DesignNoJunction Mus musculus 50 Leng4 ENSMUSG00000035596 ENSMUST00000038608 3 1 1 99 7 3643532 3643655 CTTTAAGAAAGCTGGACCTG 58 3643452 3643470 CAGAGAATGCAAACTGTGG 59 NA Mus musculus 50 Colec12 ENSMUSG00000036103 ENSMUST00000040069 1 1 1 80 18 9874868 9874886 ACAGTGGAATGACTTCCAG 59 9874928 9877001 AATATGGATGATGGTACTGCC 59 NA Mus musculus 50 Colec11 ENSMUSG00000036655 ENSMUST00000036136 1 1 1 80 12 29280193 29280832 AGAACCTGGTATTCCATGTG 59 29280132 29280150 GTTGTCAGTTGAGTGACCT 59 NA Mus musculus 50 Tmtc3 ENSMUSG00000036676 ENSMUST00000058154,ENSMUST00000099318 2 2 2 81 10 99934656 99937019 TAATTCCATAGTGTGGACCC 58 99934594 99934615 CGTTATTCCTTGTTCCTTACAC 59 NA Mus musculus 50 Prkcdbp ENSMUSG00000037060 ENSMUST00000047040 2 1 1 106 7 112629715 112630290 GGAGGAGACTGAAATTCCAG 59 112629628 112629646 CTCCAACTTCATCCTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930444A02Rik ENSMUSG00000037251 ENSMUST00000061850 1 1 1 271 8 27096954 27096972 AATGGTCTCACGCATAGAG 59 27094100 27096721 CATTCAGACAGAAAGACTCTC 58 NA DesignRelaxed Mus musculus 50 Tacc3 ENSMUSG00000037313 ENSMUST00000079534,ENSMUST00000114426,ENSMUST00000114422,ENSMUST00000074849 1 4 4 80 5 34010690 34010789 TTTGGATGTTCCGGTATCTG 59 34010832 34010850 ACATCCACAATAGGCTCAG 59 NA Mus musculus 50 Enpp1 ENSMUSG00000037370 ENSMUST00000105520,ENSMUST00000039882 3 2 2 81 10 24369099 24369118 GTCCTGTGCATAAATGTTCC 59 24367891 24369056 ACTCTATTTAGTCTCGGTGG 58 NA Mus musculus 50 Wdtc1 ENSMUSG00000037622 ENSMUST00000043305,ENSMUST00000105906 1 2 2 85 4 132859576 132860078 TATTATGTCGCAGGTCACC 59 132859509 132859527 CTGAAGGTCACATAGGTGG 59 NA Mus musculus 50 Nek5 ENSMUSG00000037738 ENSMUST00000081815,ENSMUST00000067722 1 2 2 80 8 23207252 23207270 GCTACAAAGTCATTGGGAG 58 23205756 23207208 TTCCAATATTCCTGGTCCT 57 NA Mus musculus 50 Darc ENSMUSG00000037872 ENSMUST00000038227 2 1 1 66 1 175263058 175263536 GAACTGTCTGTATCCGGTG 59 175263010 175263029 GCTGTCGAAAGTAAACTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gm443 ENSMUSG00000038044 ENSMUST00000045016 2 1 1 60 5 25022404 25022422 CAAGAATTAGCCCAAACCC 58 25022446 25022464 GTAGAACAACAAAGACCGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gstp2 ENSMUSG00000038155 ENSMUST00000042700 3 1 1 107 19 4040787 4040805 AGAATGACTACGTGAAGGC 59 4040530 4040716 CAAAGGAGATCTGGTCACC 59 NA Nonspecific Mus musculus 50 BC050196 ENSMUSG00000038292 ENSMUST00000042672 1 1 1 81 7 52451974 52455625 AACTGCACAGATGTACCTC 59 52451911 52451932 GTTAAGGATCTGTTCCTCTAGG 59 NA Mus musculus 50 Car14 ENSMUSG00000038526 ENSMUST00000036181 3 1 1 81 3 95703258 95703362 ATGGGACAGTTAGAGAAGC 58 95703195 95703215 CTCTGTAGTTCTGTACAAGGG 59 NA Mus musculus 50 Prl3a1 ENSMUSG00000038883 ENSMUST00000049463 3 1 1 80 13 27367136 27367910 TTATCAGGGTTCATCCTGGA 59 27367953 27367971 TGTCATCAGCAGACTTCAC 59 NA Mus musculus 50 Sptlc3 ENSMUSG00000039092 ENSMUST00000110083,ENSMUST00000047370 2 2 2 80 2 139421792 139451548 GAACATTGGAGGTATGGAGAG 59 139451589 139451608 AATCCCATCTCTTTCAGTCG 59 NA Mus musculus 50 Rln1 ENSMUSG00000039097 ENSMUST00000044143 2 1 1 60 19 29406452 29406471 CATGATAAACTGGGTGAAGC 58 29406411 29406432 CTGATTGCAAGTATTTAAGCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr126 ENSMUSG00000039116 ENSMUST00000041168 3 1 1 80 10 14130307 14130326 GAATGTTCAGAAACAGTGGA 58 14129616 14130264 GCTGTCTTACTCCAATCTG 57 NA Mus musculus 50 Snx22 ENSMUSG00000039452 ENSMUST00000044711 3 1 1 170 9 65917465 65917483 TGGAAGTTCACATTCCCTC 59 65916582 65916983 TGTACCGTTTCTTGATCCG 59 NA Mus musculus 50 Uhrf1bp1 ENSMUSG00000039512 ENSMUST00000114849,ENSMUST00000097359,ENSMUST00000088043 2 3 3 71 17 28017106 28017124 CAAGTTGACCTTCCTCCTG 59 28017158 28017177 TACTTCATCATCGCCTTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cercam ENSMUSG00000039787 ENSMUST00000047521 3 1 1 94 2 29736558 29736576 CAAACTGTTAGCATCCCAG 58 29736633 29737229 CTTTGTACTGGTCATTTGGG 58 NA Mus musculus 50 Ccdc32 ENSMUSG00000039983 ENSMUST00000036470,ENSMUST00000110834,ENSMUST00000110833 1 3 3 87 2 118852890 118852909 CCTTGCATGATTCAGAAGTG 59 118847910 118847928 TCCTTGGAAGTTACTTCCT 57 NA DesignNoJunction Mus musculus 50 Bub1b ENSMUSG00000040084 ENSMUST00000038341 2 1 1 80 2 118462563 118464141 TGATCCTACGAAACAGAATCC 59 118464183 118464201 AGGAGAAGTCCATGATCCT 59 NA Mus musculus 50 BC018242 ENSMUSG00000040563 ENSMUST00000046371 3 1 1 182 9 21743808 21745132 TTCGTCTTTGTGGAGTCTG 59 21745278 21745296 GACCAAGGCATAGATGAGG 59 NA Mus musculus 50 Mmrn2 ENSMUSG00000041445 ENSMUST00000111908 1 1 1 80 14 35210898 35211025 CAGAATTCGAGTTTCCTGG 58 35211069 35211087 GACTGAAGTGTGCTTTCAG 58 NA Mus musculus 50 Camsap1l1 ENSMUSG00000041570 ENSMUST00000048309,ENSMUST00000094523 3 2 2 80 1 138221367 138221385 AAAGGCCTGTATGTCACTG 59 138201025 138221324 ATGTGCACTCATCTGTATGG 59 NA Mus musculus 50 Sepw1 ENSMUSG00000041571 ENSMUST00000044355 2 1 1 112 7 16505700 16505808 ATAAGCCCAAGTACCTCCA 59 16505419 16505439 TACTGTCACTTCAAAGAACCC 59 NA Mus musculus 50 Pyroxd1 ENSMUSG00000041671 ENSMUST00000041852 2 1 1 80 6 142296093 142296111 CCAGAGGAAGACATTCTCC 59 142296152 142297057 CAGTACTTTAGAAACCTGTCTG 58 NA Mus musculus 50 Ammecr1l ENSMUSG00000041915 ENSMUST00000115808,ENSMUST00000048298 2 2 2 83 18 31935720 31938517 CTAAGGAACAAGACTGGGA 58 31938564 31938582 ATTCACTGGTAATTGGAGC 57 NA Mus musculus 50 Ankrd47 ENSMUSG00000042099 ENSMUST00000048560,ENSMUST00000087565 2 2 2 143 17 33959140 33959238 ATCTTAGACAATGAGGGCAC 59 33959643 33959661 ATTGCATTCCTTTGCAGTG 59 NA Mus musculus 50 Lce1f ENSMUSG00000042124 ENSMUST00000047153 3 1 1 177 3 92522970 92522988 TCTGGATGTTGTAGCAGTG 59 92522811 92522830 GTCTTCCTCATACAGGTCAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Hps4 ENSMUSG00000042328 ENSMUST00000112359,ENSMUST00000035279,ENSMUST00000112360 2 3 3 80 5 112793569 112793588 CTCTCATCTTACAGACCTGC 59 112793630 112795932 GGGAATTCACAATCAGTCCT 59 NA Mus musculus 50 Flad1 ENSMUSG00000042642 ENSMUST00000050398,ENSMUST00000107426,ENSMUST00000107429 2 3 3 80 3 89209826 89209845 GATCCTGTACATTCGTAGCA 59 89209681 89209786 TGGAGATTATACCTCTTGATGG 58 NA Mus musculus 50 D0H4S114 ENSMUSG00000042834 ENSMUST00000051087 2 1 1 118 18 33598481 33602477 TTATTAAGGGAAGACTTCCCG 59 33598383 33598401 GTAACTGGTAGCTGGAGAG 58 NA Mus musculus 50 Rnf208 ENSMUSG00000044628 ENSMUST00000114355,ENSMUST00000114351,ENSMUST00000060818 2 3 3 60 2 25099366 25099386 AGTACAAGTTCATCTCCTGTC 59 25099408 25099426 CCATAGTCAGTGAAGAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cyb5d1 ENSMUSG00000044795 ENSMUST00000108660,ENSMUST00000051620 1 2 2 60 11 69208344 69208488 CCACAGACTAGAGACATTCG 59 69208303 69208321 TACGGTATCTCATGCAACC 59 NA DesignRelaxed Mus musculus 50 Smtnl2 ENSMUSG00000045667 ENSMUST00000108500,ENSMUST00000050226,ENSMUST00000054338 1 3 3 171 11 72217441 72217460 CAAATTCATGCATCTTGGAG 57 72216621 72216639 AGAATTTCTCGGAGACTCG 58 NA DesignNoJunction, InUTR Mus musculus 50 Rp1l1 ENSMUSG00000046049 ENSMUST00000058229 2 1 2 65 14 64645014 64645032 TTATCTAGTGTGACTGCGA 57 64646595 64646613 TATGACACTTTGTTTGGCG 58 NA DesignNoJunction Mus musculus 50 6330442E10Rik ENSMUSG00000046157 ENSMUST00000070174 2 1 1 84 12 80066151 80078756 CTGTGATAAGAGGTCCCAG 58 80066085 80066105 CGTGGATAGCATATAGGTACC 59 NA InUTR Mus musculus 50 EG432987 ENSMUSG00000046162 ENSMUST00000055625 3 1 1 98 15 101475707 101475853 TTTGAGGCAGAACTGTCTC 59 101475627 101475645 AATGATGCTGTCCAAGTCC 59 NA Nonspecific Mus musculus 50 Ermp1 ENSMUSG00000046324 ENSMUST00000054083 3 1 1 83 19 29705913 29706889 ACATTCCAGGAATAGACTTAGC 59 29705851 29705869 CTATGAGAATCCTGTCCGC 59 NA Mus musculus 50 1810007E14Rik ENSMUSG00000046804 ENSMUST00000094697 2 1 2 224 2 118603489 118603507 CTGTCATGAGGGACATCAC 59 118603757 118603776 ATTTCTCAGTGATGTGGACC 59 NA DesignNoJunction, InUTR Mus musculus 50 Ankrd33 ENSMUSG00000047034 ENSMUST00000070875,ENSMUST00000050450 3 2 2 86 15 100947067 100947085 CTGTCCTTTCCTGGATGTG 59 100947135 100947331 ACAAGAGACATGTGACCTG 59 NA Mus musculus 50 AI480653 ENSMUSG00000047434 ENSMUST00000055389 3 1 1 97 16 31007927 31050730 ATCATGCCCAAAGAGATCC 59 31007848 31007867 AGAAAGTTGTCGAACTCCTC 59 NA Mus musculus 50 Gphb5 ENSMUSG00000048982 ENSMUST00000051079 2 1 1 118 12 76516666 76516684 GGAATTCACTTTCATGGCC 59 76513972 76513990 CTTCAATGTAGGGAGGCTC 59 NA DesignNoJunction Mus musculus 50 NP_001020022.2 ENSMUSG00000049097 ENSMUST00000058943 2 1 1 60 3 96401831 96401850 ATCATAACGACGGATACCTC 58 96401872 96401891 GGGAATTAAGATACTGCCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp219 ENSMUSG00000049295 ENSMUST00000067549,ENSMUST00000111621 3 2 2 248 14 52629656 52629674 AACCAAAGAATGTGAAGGG 57 52629119 52629138 GATGGAATTGAATCGGAAGC 59 NA DesignNoJunction, InUTR Mus musculus 50 Zbtb45 ENSMUSG00000049600 ENSMUST00000051390 3 1 1 95 7 13591729 13592390 ACATGTTCATCCACTCTGG 59 13591652 13591670 GTGTGACCATATGCTTGAG 58 NA DesignNoJunction Mus musculus 50 Aftph ENSMUSG00000049659 ENSMUST00000094376,ENSMUST00000035350 1 2 2 82 11 20603825 20608691 CAGGATTGGGAATGTTAGAG 57 20603762 20603780 TGTCTGACCAATAGAAGCA 58 NA Mus musculus 50 6530401C20Rik ENSMUSG00000050022 ENSMUST00000060918 1 1 1 101 5 141225278 141227902 GGTACAAGAGACTCCATGC 59 141227967 141227985 CACTGAAGGGTAAGGTGTC 59 NA Mus musculus 50 Gsg2 ENSMUSG00000050107 ENSMUST00000052140 2 1 1 60 11 72951084 72951104 CACAGAAGAGAACAAGTTTGG 59 72951044 72951063 TCTTTCACAACACGATTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nhedc1 ENSMUSG00000050150 ENSMUST00000078568,ENSMUST00000116272,ENSMUST00000090209 1 3 3 81 3 135034971 135036093 CTCTCATTGGGATGTTACTG 57 135036136 135036155 CATGTGGTAGGAATATGGAC 57 NA Mus musculus 50 V1rj2 ENSMUSG00000050453 ENSMUST00000053008 2 1 1 60 7 13804695 13804714 CAAGTGACACATTCTTCCAG 58 13804737 13804755 TTCCCTATCACACCAAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1323 ENSMUSG00000050504 ENSMUST00000057071 2 1 1 60 X 47363386 47363406 ATGGAGAATTCATCTACAGGG 58 47363346 47363367 GCTGATAGTTATCTGTCATACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 2310028O11Rik ENSMUSG00000050608 ENSMUST00000063040 2 1 1 94 4 138661002 138661778 CTTTAAGAGAAGAATGTGGCC 58 138660928 138660946 GATACGGAGCCTGAAAGTC 59 NA Mus musculus 50 2310002B06Rik ENSMUSG00000050668 ENSMUST00000091915 3 1 1 80 17 79241556 79243163 GTGAAGATTTGAGTGTGCT 57 79243207 79243225 CACACCAAATGCAATACAG 57 NA Mus musculus 50 Zfp623 ENSMUSG00000050846 ENSMUST00000037260 1 1 1 60 15 75778693 75778712 CATACCTCATACGACACCAG 59 75778733 75778753 CACTCCTTACACTCATACACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sepn1 ENSMUSG00000050989 ENSMUST00000084231 3 1 2 70 4 134095570 134095588 CTACATGCAGTTCCTGAGG 59 134095517 134095535 CAGGTCCTCTAGGACTAGG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 NR_003640.1 ENSMUSG00000051139 ENSMUST00000059320 2 1 1 60 X 160198238 160198256 TGATTACGGAGATTTCGTG 57 160198196 160198214 AATGGCGATCTGAAATTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Flrt3 ENSMUSG00000051379 ENSMUST00000056760,ENSMUST00000110057 2 2 2 86 2 140487471 140488445 AGTAACAGAAGCTACCTGC 58 140487403 140487421 TAGTCCCGATGAGGAAGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Zfp191 ENSMUSG00000051469 ENSMUST00000066497 1 1 1 70 18 24176180 24176198 GAGAGTGAGCTTGATGACC 59 24175892 24175910 TCTTCTACAAGCACTTCCC 58 NA DesignNoJunction Mus musculus 50 Cox6b2 ENSMUSG00000051811 ENSMUST00000063324 2 1 1 61 7 4703678 4703697 TCCGTGTATTCCATTCACTG 59 4703551 4703569 CTTGATCTGCTCATTCCAG 57 NA DesignNoJunction Mus musculus 50 Gnpda1 ENSMUSG00000052102 ENSMUST00000063814 3 1 1 143 18 38497759 38497777 CTGACAAGTACTTCACCCT 58 38492982 38494679 GAGGAAGACCCACATACTC 58 NA Mus musculus 50 Sema5b ENSMUSG00000052133 ENSMUST00000050625 2 1 1 89 16 35662969 35663206 CCCTATGGAATTCAAGACAC 57 35663257 35663276 GTATACACATTGGTCTGCTG 58 NA Mus musculus 50 Serpinb6c ENSMUSG00000052180 ENSMUST00000076532 2 1 2 81 13 33972638 33976347 TCATGCAATGAATGAGGAG 57 33972575 33972595 GGATATCTCTTCCACATAGGT 58 NA Mus musculus 50 Dlg2 ENSMUSG00000052572 ENSMUST00000074273,ENSMUST00000107196 3 2 2 102 7 98598390 98598410 GGATATGTCTTACAGTCTCAC 57 98881648 98959001 CTGTTCCATTGACATAAGGA 57 NA Mus musculus 50 Spag16 ENSMUSG00000053153 ENSMUST00000087282 3 1 3 81 1 70311559 70311578 GGCAATGTACTTCTTACAGG 58 70311621 70317784 GAAGCTTCAAGCTCAATCTC 58 NA Mus musculus 50 1700008J07Rik ENSMUSG00000053989 ENSMUST00000066769 1 1 1 106 7 134655852 134655870 TTGTCTCCCTCTCCTTACC 59 134655764 134655782 ATTTAAAGTGGTGAAGGCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 2900041M22Rik ENSMUSG00000054418 ENSMUST00000067484 1 1 1 81 11 117472745 117473591 CAGGATTCAGGAAGAATGTC 57 117473635 117473653 TCAAAGCTGTTGAGAACGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem103 ENSMUSG00000054836 ENSMUST00000068071,ENSMUST00000081750 1 2 2 179 9 110218290 110218308 CGTTTATTCAGGACACCCT 59 110218451 110222086 CTACCACGTTTCCCTTCAG 59 NA Mus musculus 50 ENSMUSG00000055704 ENSMUSG00000055704 ENSMUST00000069431 3 1 1 69 10 77949523 77949541 GAAAGAAGTCTGCCTATGC 58 77949472 77949490 ACATATTGAACTCCAGCGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nap1l3 ENSMUSG00000055733 ENSMUST00000079490 2 1 1 60 X 119509178 119509197 TTCAATTTCTTCAGTCCTCC 57 119509137 119509155 CATCTTCTCTTGGTTCCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pard6g ENSMUSG00000056214 ENSMUST00000070219 3 1 1 289 18 80243825 80243844 CATAAGTCTCAGACCCTACG 58 80276777 80313717 TCTGCTTCTTCTCGTTTCTG 59 NA DesignRelaxed Mus musculus 50 Retsat ENSMUSG00000056666 ENSMUST00000070597 2 1 1 104 6 72556936 72556954 CTATGGAGCTGACCATGAC 59 72557021 72557248 AAGATATCTTGGCCTGTCAG 59 NA Mus musculus 50 Chd6 ENSMUSG00000057133 ENSMUST00000039782,ENSMUST00000039749 2 2 3 80 2 160838809 160838828 CACAAAGTGCTCATCTTCTC 58 160834277 160838767 ATAGGTGTATCTCCTCTGGA 58 NA Mus musculus 50 Gsk3a ENSMUSG00000057177 ENSMUST00000071739 1 1 1 115 7 26014571 26014589 CTGTCCATCCAACCATCTC 59 26013940 26014493 TCAGTTAAAGCTTGTGAGGA 58 NA Mus musculus 50 Phex ENSMUSG00000057457 ENSMUST00000079945 3 1 1 80 X 153600197 153612147 CCACAATTTAGGGTCAATGG 58 153600136 153600155 CATAGTGGAATTTCGTGGAC 58 NA Mus musculus 50 Brd9 ENSMUSG00000057649 ENSMUST00000099384 3 1 1 81 13 74078222 74079395 CAGTCACAGAATTTAAGGCAG 59 74079438 74079456 TTGTAGTACACGGTGTCTG 58 NA Mus musculus 50 Ube2e2 ENSMUSG00000058317 ENSMUST00000076133 1 1 1 75 14 19704041 19720780 GAATTCAGAAGGAGCTTGC 58 19462922 19462940 ATGTTGTCTCCTTTGGGTC 59 NA DesignNoJunction Mus musculus 50 Krt6a ENSMUSG00000058354 ENSMUST00000023788 2 1 1 238 15 101521127 101521249 CAGTCAACATCTCTGTGGT 59 101520907 101520925 GTAGCTCTTCTTGCTGGAG 59 NA DesignRelaxed Mus musculus 50 EG546038 ENSMUSG00000059463 ENSMUST00000039075,ENSMUST00000110767 1 2 2 60 8 19141400 19141419 CACTTAGTCACTGAACCTCC 59 19141442 19141460 CATTTACTCCTCGAGCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr898 ENSMUSG00000060101 ENSMUST00000076504 1 1 1 60 9 38156967 38156985 TATGCTGGATGCATGAGTC 59 38157008 38157027 CATAACATTCAGAGTTGGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Myl6 ENSMUSG00000060680 ENSMUST00000074642 1 1 1 60 14 56039220 56039239 AAATCCGTCATGTCCTAGTC 59 56039179 56039197 CGCGTCTCTATTTCTTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Taok3 ENSMUSG00000061288 ENSMUST00000111978,ENSMUST00000092889,ENSMUST00000111975 2 3 3 101 5 117722198 117722216 AATCAAGATGCAAACGGAG 58 117722281 117723692 TCCTCTTCAATCTTCTGCT 57 NA Mus musculus 50 NM_146497.1 ENSMUSG00000061975 ENSMUST00000079865 1 1 1 60 7 115466790 115466808 AGCAATCTGTAACCCACTG 59 115466748 115466767 CAACTGGATACAGGTTTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ssxa1 ENSMUSG00000062814 ENSMUST00000072593 2 1 1 90 X 20696490 20696511 CCAGATTTCATGGAATCTAAGG 58 20696562 20698226 TTCTGAGTCCTTGACTCTC 57 NA Mus musculus 50 Ica1 ENSMUSG00000062995 ENSMUST00000115520,ENSMUST00000038403 2 2 3 130 6 8606393 8608225 GAGGCAGTTAATTTCTTTGGAG 59 8603521 8603634 GTTCATCTATGGGTCCTGAG 59 NA Mus musculus 50 Sox7 ENSMUSG00000063060 ENSMUST00000079652 2 1 1 82 14 64562763 64562781 GGATGAGAGGAAACGTCTG 59 64562827 64566606 CCTTCCATGACTTTCCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ddo ENSMUSG00000063428 ENSMUST00000099942 3 1 4 87 10 40351512 40351530 TCATCTCAGACAGGTTCAC 58 40351581 40357163 GAATATCTGCCAACTGCAC 58 NA Mus musculus 50 Gpatch1 ENSMUSG00000063808 ENSMUST00000079693,ENSMUST00000108054 1 2 2 80 7 36094365 36094383 GTCTTCAAGACAGAACAGG 57 36093342 36094322 CCGAATTCACTAAGATCCTC 57 NA Mus musculus 50 EG245405 ENSMUSG00000063816 ENSMUST00000078326 3 1 1 61 X 43809143 43809161 CCTCTAAGAACCGAGAAGC 59 43809100 43809118 ATTGGAGACTCTGATAGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-101a ENSMUSG00000065451 ENSMUST00000083517 1 1 1 60 4 101019597 101019615 TTATCACAGTGCTGATGCT 58 101019555 101019573 GCCATCCTTCAGTTATCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-26b ENSMUSG00000065468 ENSMUST00000083534 2 1 1 60 1 74440891 74440911 GACCCAGTTCAAGTAATTCAG 58 74440933 74440951 CAAGTAATGGAGAACAGGC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-26a-1 ENSMUSG00000065513 ENSMUST00000083579 1 1 1 60 9 118940923 118940941 GCCTCGTTCAAGTAATCCA 59 118940965 118940983 AGTAACCAAGAATAGGCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000010694 ENSMUSG00000066007 ENSMUST00000092750,ENSMUST00000105727 1 2 3 151 4 146157697 146160728 GTGTCTATTAACCTTCAAGGAC 58 146162372 146162390 AGTTTCCACATATGCAGTG 57 NA Nonspecific, DesignNoJunction Mus musculus 50 Olfr538 ENSMUSG00000066125 ENSMUST00000084457 3 1 1 124 7 147760808 147760826 ACTCATCTCTGTTCTGTGC 59 147760913 147760932 CCTCAGTGTATAGATGAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lgals1 ENSMUSG00000068220 ENSMUST00000089377 3 1 1 96 15 78758436 78758454 GAATGTCTCAAAGTTCGGG 58 78760097 78760115 GATTGAAGTGTAGGCACAG 58 NA DesignNoJunction Mus musculus 50 Rpl32-ps ENSMUSG00000068969 ENSMUST00000091052 3 1 1 80 3 69521058 69521076 CAATATCAAGGAGCCGGAG 59 69520996 69521015 TTCTTAGAGGACACGTTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hist1h2bn ENSMUSG00000069307 ENSMUST00000091749 1 1 3 247 13 21901840 21901858 CATCATGAACTCGTTCGTG 58 21899944 21899962 AGAGTGAGTTCCAGGAGAG 59 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Mus musculus 50 A630095E13Rik ENSMUSG00000070313 ENSMUST00000093868 3 1 1 62 9 36444942 36445390 TACGGCTACTCTATAAAGATGG 58 36444901 36444919 AGCATGTTCCAAGACATCC 59 NA DesignRelaxed Mus musculus 50 Tmem102 ENSMUSG00000070397 ENSMUST00000051025 1 1 1 60 11 69619040 69619058 AAAGAGGTAAAGGGAGGTG 58 69618998 69619016 TCCTGGGAATACAATAGCC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Utp3 ENSMUSG00000070697 ENSMUST00000090413 2 1 1 60 5 88984314 88984332 ATAGAAGACCTCCAAGCCA 59 88984353 88984374 ACTGTAACAAGGGTTCTAACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sult2a2 ENSMUSG00000070811 ENSMUST00000086148 1 1 1 81 7 14323630 14323648 GGGTAACACAAACCTTGTG 58 14323693 14364781 CCCAGTTGTACCATTTCCT 59 NA Mus musculus 50 Tex24 ENSMUSG00000071138 ENSMUST00000095375 3 1 1 124 8 28456313 28456331 CAGAAACATTTGGGCTGTG 59 28456419 28459048 TTCCTGTATTGTGCTCGAG 59 NA InUTR Mus musculus 50 V1rc33 ENSMUSG00000071428 ENSMUST00000095862 3 1 1 60 6 58165907 58165928 CATAATTGTAGGTCACAGACCT 59 58165868 58165886 AATGAAGGTCAGCTGACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ganab ENSMUSG00000071650 ENSMUST00000096246,ENSMUST00000096247 3 2 2 81 19 8989689 8989709 CTTTAACTATCAGACTCGCCA 59 8989752 8989903 GTCTGCTGAACTAGAGACC 59 NA Mus musculus 50 G630016D24Rik ENSMUSG00000072571 ENSMUST00000100638 3 1 1 63 14 52637646 52637664 TATCACCCTTGAACTCCGA 59 52638222 52638240 GTTGGATATCATCATGGCC 58 NA DesignNoJunction Mus musculus 50 ENSMUSG00000072686 ENSMUSG00000072686 ENSMUST00000100826 2 1 1 60 14 25732848 25732867 GTGAAATGGATACTTCTGGG 57 25732889 25732908 TATTTCAGGAACCCAATCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000072769 ENSMUSG00000072769 ENSMUST00000100944 3 1 1 83 5 108801355 108801373 CAGCTTACCCATTTCACTG 58 108801420 108801552 GAAGTGTACAGTGCATGTC 58 NA InUTR Mus musculus 50 9830107B12Rik ENSMUSG00000073386 ENSMUST00000113256 2 1 2 299 17 48304138 48304158 GAGAGCTTTCATCTAGTTCAG 57 48282473 48282492 TAGAAGACTGTAGGATGGAG 57 NA DesignNoJunction, InUTR Mus musculus 50 ENSMUSG00000073738 ENSMUSG00000073738 ENSMUST00000097824 2 1 1 62 1 9951092 9951113 GTTATTTGAAGAAAGGCTGGAG 59 9951051 9951069 TCATGTCTGTGCGAATAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073850 ENSMUSG00000073850 ENSMUST00000098069 2 1 1 60 4 55057233 55057253 ACAACACCTACACATCTACAG 59 55057193 55057213 GCTTAATGTAATACAGGGTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074035 ENSMUSG00000074035 ENSMUST00000098321 3 1 1 60 9 114843309 114843329 GACCCAACTTATACAAGTGTC 58 114843349 114843369 CCTTAAGTGATAGTTGTCCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074057 ENSMUSG00000074057 ENSMUST00000098356 2 1 1 115 7 86611753 86611772 GATCTGTCAATCTCTGGGTC 59 86611850 86611868 GTCCCAGTTATTCACCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 V1rd22 ENSMUSG00000074289 ENSMUST00000098702 3 1 1 60 7 24539462 24539481 ACTCTGGTTTCGAGTTAGTC 59 24539503 24539522 CTGATGAATATGGCATCGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074351 ENSMUSG00000074351 ENSMUST00000098770 1 1 1 97 8 50144043 50144061 TTCACACTCTTTCCAGCTG 59 50143514 50143982 GCTTCAGAGCTTTACACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nlrx1 ENSMUSG00000074407 ENSMUST00000085981 1 1 1 138 9 44064914 44064932 TGTAGTAGTCTTCCTCCCG 59 44065034 44065052 GTAGTTCCGGAAGCTACAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:2442502 ENSMUSG00000074498 ENSMUST00000098968 1 1 1 60 8 3154177 3154196 AGAACACCTGTGTTCATCTG 59 3154136 3154154 TGTAGGCCTTGAAGAAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ankrd5 ENSMUSG00000074771 ENSMUST00000028726 1 1 1 80 2 136370502 136371451 CTAATGCTATCAACACATCCAC 59 136371492 136371510 TGCCACGAACTATTTCCAG 59 NA Mus musculus 50 ENSMUSG00000075070 ENSMUSG00000075070 ENSMUST00000099759 2 1 1 72 16 42797063 42875741 ATCTCAAGCATCAACTGGT 58 42797009 42797027 TCTGTTTCCATTGTCACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1221 ENSMUSG00000075102 ENSMUST00000099795 2 1 1 60 2 88952362 88952380 CATGACCCAATTGTTTGCC 59 88952320 88952338 AGCTGACAGTACAATCACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1080 ENSMUSG00000075178 ENSMUST00000111580,ENSMUST00000099881 3 2 2 81 2 86393598 86393617 TCTCATAGCTGTTCTCAGGA 59 86393536 86393554 AACTACTGTCAGGTGTGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zbtb2 ENSMUSG00000075327 ENSMUST00000100078,ENSMUST00000100077 3 2 2 110 10 5977920 5977938 CCAGAACCAGAACTCAGAC 59 5978012 5978030 TTGATGGACGCTAACACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075393 ENSMUSG00000075393 ENSMUST00000100163 3 1 1 60 15 102932848 102932868 TTCTATCCTTCCTTTCAGCTG 59 102932889 102932908 CAGACTACAGAGTGCTAACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC030046 ENSMUSG00000075592 ENSMUST00000100529 1 1 1 60 14 56483119 56483139 TATCAAAGAGAAGGTTAGCCC 59 56483161 56483179 TCCCACAGATGTTGAAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV6-13 ENSMUSG00000076594 ENSMUST00000103395 1 1 1 60 6 70407543 70407561 CCATCAGCAATATGCAGTC 58 70407501 70407519 TAGCTGCTATATTGCTGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV14D-1 ENSMUSG00000076779 ENSMUST00000103589 1 1 1 60 14 53475654 53475672 CTACTTCCCATGGTACCAG 58 53475695 53475714 ACGTATGGATATCAGGAGTG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRAV14-3 ENSMUSG00000076857 ENSMUST00000103669 1 1 1 97 14 54383142 54383160 CCGCAATTCTAAACTGCAG 59 54383221 54383239 TATGGCTATCAGGAGAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-871 ENSMUSG00000077944 ENSMUST00000104751 1 1 1 60 X 64063654 64063674 TGCTCTATTCAGATTAGTGCC 59 64063614 64063632 TTATCCAGAATGGTGCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 AW011738 ENSMUSG00000078349 ENSMUST00000105140 1 1 1 100 4 155577759 155577777 AGAGGGAAGGGTAACTCTC 59 155577841 155577859 CTCATCTCCAGGATGTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:3034522 ENSMUSG00000078369 ENSMUST00000105162 1 1 1 136 12 84973659 84973677 CTATTGGCTTCCGTTTCAG 58 84973777 84973795 GAAACCTACTGAGAGGTGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 NP_001092785.1 ENSMUSG00000078626 ENSMUST00000106916,ENSMUST00000106918 2 2 2 140 4 101640643 101640661 CACATGGTAGCAAATTGGC 59 101640375 101640539 CAGTCTACACCTCTTAGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mrgpra3 ENSMUSG00000078698 ENSMUST00000046797 2 1 1 60 7 54844999 54845018 TGCGGTTACTTAGATAACCA 58 54844958 54844976 TAAAGATGTCCCATGCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2AMI0_MOUSE ENSMUSG00000078703 ENSMUST00000107642 2 1 1 83 4 53694997 53695015 GAATTTCCGAGTGAGAGCA 59 53695061 53699269 AAGTTAAGTGCTCTGGTCTC 59 NA Mus musculus 50 A2AMI0_MOUSE ENSMUSG00000078703 ENSMUST00000107642 3 1 1 84 4 53694996 53695014 TGAATTTCCGAGTGAGAGC 59 53695061 53699269 AAGTTAAGTGCTCTGGTCTC 59 NA Mus musculus 50 2810047C21Rik ENSMUSG00000078803 ENSMUST00000098830 3 1 1 80 7 10458382 10459549 CCAGAAAGAAGACTGTTTATCC 58 10458323 10458341 TGAGAGTCATCAAGCAGTG 59 NA Nonspecific Mus musculus 50 Ifi47 ENSMUSG00000078920 ENSMUST00000109202,ENSMUST00000046704 3 2 2 60 11 48909466 48909486 TTAGAACCAAGGTGGATAGTG 59 48909508 48909526 TTGAAAGCTATGGGTTTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp456 ENSMUSG00000078995 ENSMUST00000057070 3 1 1 60 13 67467347 67467365 ACAATTGCAAGAAGTGTCC 58 67467305 67467323 GCTTGATGTCGTACAAAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG435337 ENSMUSG00000079029 ENSMUST00000110147 3 1 1 109 12 89114841 89114859 CTCTCAGAAGACAGGACTC 58 89114932 89114950 CTTAGGATGGGTACCAGGA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Reg3a ENSMUSG00000079516 ENSMUST00000101272 2 1 1 81 6 78331145 78331898 TTTCAGGTACAAGGTGAAGAC 59 78331941 78331959 AGCGATAAGCCTTGTAACC 59 NA Mus musculus 50 NP_001079003.1 ENSMUSG00000079521 ENSMUST00000114030 3 1 1 82 X 75374597 75374616 GACTTGTGAAATATGCTGTG 57 75374660 75374915 TTACTCAGGACAGGTATCTG 57 NA Mus musculus 50 Tmsb10 ENSMUSG00000079523 ENSMUST00000114050,ENSMUST00000114049,ENSMUST00000114048 3 3 3 233 6 72907634 72907912 AAGAGACCATTGAACAGGA 58 72907419 72907437 TTTGGCAGTCCGATTAGTG 59 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Mus musculus 50 A2BH01_MOUSE ENSMUSG00000079577 ENSMUST00000114672 1 1 1 80 X 64951532 64951552 GTAGTAACTTCTGTTAAGCGC 59 64951593 64952498 ATGGAACATAGTCCTTTCCC 59 NA Nonspecific Mus musculus 50 Cypt14 ENSMUSG00000079618 ENSMUST00000115112 2 1 1 92 X 37216676 37216694 AAATGTAAGGCTTCCTGTC 57 37216424 37216621 CTTTCCTGTTATCTCACCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:3702087 ENSMUSG00000079718 ENSMUST00000097421 3 1 1 60 17 8237686 8239481 GCTGTGAGAAGAGATTTCAC 58 8237645 8237663 GACATTCATTTCGGTAGCC 58 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 MGI:3710590 ENSMUSG00000079997 ENSMUST00000047208 1 1 1 60 14 119275366 119275384 TCTCTGTGACTATTGTGGC 58 119275324 119275342 TTTCATGGTTTGGAATGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Col4a4 ENSMUSG00000080016 ENSMUST00000116131 1 1 1 71 1 82448259 82448278 CCACAAATTGAAAGGTTTGC 58 82448207 82448225 TTACTTTGGCTGAGGAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sycn ENSMUSG00000080171 ENSMUST00000116338,ENSMUST00000116337 1 2 2 60 7 29326273 29326291 CAAAGGCATCTTTGGAGAC 58 29326313 29327102 TCAATAGCACTTGCAGTAGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Comt ENSMUSG00000000326 ENSMUST00000115609,ENSMUST00000000335 3 2 2 81 16 18411273 18411291 ACCATGGAGATTAACCCTG 58 18410898 18411228 GGATGGAAACTTTGTCCTG 58 NA Mus musculus 50 Tmem79 ENSMUSG00000001420 ENSMUST00000001456,ENSMUST00000107553,ENSMUST00000107552 1 3 3 83 3 88136418 88136436 TGTGCTTTCCACCTATCTG 59 88133846 88136372 TATATCAGCCGAGATATGGC 58 NA Mus musculus 50 Folh1 ENSMUSG00000001773 ENSMUST00000107271 1 1 2 140 7 93905453 93905471 TGATGATGCACAGAAACTC 57 93894690 93895296 ATATGCATCTTGACCTTCTG 57 NA Mus musculus 50 Hmgn2 ENSMUSG00000003038 ENSMUST00000102553,ENSMUST00000105893,ENSMUST00000102552 2 3 5 122 4 133522385 133522689 TTGTCTGCTAAACCTGCTC 59 133521899 133521917 ATTATTCGCATCCTTCCCG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Dll3 ENSMUSG00000003436 ENSMUST00000050191 2 1 3 80 7 29079108 29079126 TCATCCTGAAGATGGAGAC 58 29076686 29079064 TGGATCAACCAATCCTCTC 58 NA Mus musculus 50 Dusp3 ENSMUSG00000003518 ENSMUST00000107172,ENSMUST00000107173,ENSMUST00000003612 1 3 3 100 11 101842948 101842966 CAGATTTCATTGACCAGGC 58 101836189 101836207 GAGGTAGGCGATAACTAGC 59 NA DesignNoJunction Mus musculus 50 Dgcr6 ENSMUSG00000003531 ENSMUST00000076757,ENSMUST00000066027 1 2 2 60 16 18066909 18066927 CCTCTACAACCAGAGACTG 58 18069518 18069536 CCTTAGAGTCTGTCTGAGC 58 NA DesignNoJunction Mus musculus 50 Klc4 ENSMUSG00000003546 ENSMUST00000003642 1 1 2 96 17 46773210 46773228 TAAAGCAGGGCAAGTACTC 59 46772968 46773150 TTGTGGTCATCATCCACAG 59 NA Mus musculus 50 Rpl8 ENSMUSG00000003970 ENSMUST00000004072 3 1 1 65 15 76735437 76735455 TCATTTCCTCTGCCAACAG 59 76736303 76736321 TAGGCTTGTCAATTCTGCC 59 NA DesignNoJunction Mus musculus 50 Abca13 ENSMUSG00000004668 ENSMUST00000042740 1 1 2 80 11 9442107 9442126 CTGAATCATCTCAACAACCT 57 9442166 9466289 CAGGGTTATTCCATATTGTCTC 58 NA Mus musculus 50 Eif4g2 ENSMUSG00000005610 ENSMUST00000005750 2 1 2 87 7 118219850 118219868 TTATCCCAGCTACAAGGAC 58 118219214 118219801 GCCTCAAACTAATCTCATCTG 58 NA Mus musculus 50 Pole ENSMUSG00000007080 ENSMUST00000112482,ENSMUST00000007296 3 2 3 81 5 110718809 110718828 CTTAGATGAAGACAAACGCT 57 110718872 110719253 CAAGGCCACCTTAAATCTG 58 NA Mus musculus 50 Rnmt ENSMUSG00000009535 ENSMUST00000025427 2 1 2 156 18 68473488 68477654 GCTTTGAACTGATAATGGCA 58 68478778 68478797 TTAGAGTTCTCATGTGCAGG 59 NA Mus musculus 50 Tex11 ENSMUSG00000009670 ENSMUST00000113718,ENSMUST00000009814 1 2 3 80 X 98075366 98075384 ACGTGTTTACTTGTAGCAG 57 98071936 98075323 TAGTAACATGTTCTGCTCAC 57 NA Mus musculus 50 Anxa9 ENSMUSG00000015702 ENSMUST00000015846,ENSMUST00000107183 2 2 2 80 3 95106961 95106979 GATGTACTGACCAATCGGA 58 95106693 95106918 CAATAGATCCTGTTTGGTGC 58 NA Mus musculus 50 Kcnq2 ENSMUSG00000016346 ENSMUST00000049792,ENSMUST00000103048,ENSMUST00000103051,ENSMUST00000103050,ENSMUST00000103049 2 5 10 82 2 180821722 180821740 ACGTCATCGAACAGTACTC 59 180817146 180821676 CACAATCTGGTCCACTCTG 59 NA Mus musculus 50 Wt1 ENSMUSG00000016458 ENSMUST00000016602,ENSMUST00000111101,ENSMUST00000111100,ENSMUST00000111099,ENSMUST00000111098 2 5 5 92 2 105009202 105009220 TACCAGTGTGACTTCAAGG 58 105009276 105010096 GAATGGTTTCACACCTGTG 58 NA Mus musculus 50 E2f3 ENSMUSG00000016477 ENSMUST00000102948,ENSMUST00000091673 2 2 2 131 13 30012031 30012050 CTCAGATGGTCTAAAGACCC 59 30010601 30010619 AACTTCTTGGTGAGCAGAC 59 NA DesignNoJunction, InUTR Mus musculus 50 Pdcd1lg2 ENSMUSG00000016498 ENSMUST00000112576,ENSMUST00000016642 3 2 2 111 19 29496920 29511730 CTGTAGCAGCTTTATTCACC 58 29511804 29511822 TCCAGTTCAGTGCATTCTC 59 NA Mus musculus 50 Cmah ENSMUSG00000016756 ENSMUST00000050859,ENSMUST00000110391 3 2 3 152 13 24528620 24531003 TTTACTGAGGAATGGAAAGC 57 24531115 24548757 CTTAATGTACTTGTCAGATGGG 58 NA Mus musculus 50 Scube1 ENSMUSG00000016763 ENSMUST00000043634 3 1 3 121 15 83469240 83507343 CTCCAATGAGACATGTGCA 59 83469137 83469155 TGCATGTCTTTCCATCTGG 59 NA Mus musculus 50 Elmo2 ENSMUSG00000017670 ENSMUST00000103091,ENSMUST00000074046,ENSMUST00000094329 2 3 5 126 2 165119753 165119771 GAAAGAGAAGAGTGCCCTG 59 165116044 165117607 ATCAATCCAGATGCAGTACTC 59 NA Mus musculus 50 Ctsa ENSMUSG00000017760 ENSMUST00000017904,ENSMUST00000103093,ENSMUST00000103092,ENSMUST00000109323,ENSMUST00000109319,ENSMUST00000109321 1 6 7 120 2 164660795 164661131 CTAGCATGAATCTTCAGGG 57 164661215 164661938 GAAGTCCAAAGTCTGTTCC 57 NA Mus musculus 50 Mapt ENSMUSG00000018411 ENSMUST00000018555,ENSMUST00000100347,ENSMUST00000106993,ENSMUST00000106992,ENSMUST00000106991,ENSMUST00000106987,ENSMUST00000078906,ENSMUST00000106989,ENSMUST00000106988 2 9 10 80 11 104171781 104171800 ACCTAAAGAATGTCAGGTCG 59 104171842 104179483 TAATTATCTGCACCTTGCCA 59 NA Mus musculus 50 Mapt ENSMUSG00000018411 ENSMUST00000018555,ENSMUST00000100347,ENSMUST00000106993,ENSMUST00000106992,ENSMUST00000106991,ENSMUST00000106987,ENSMUST00000078906,ENSMUST00000106989,ENSMUST00000106988 3 9 10 80 11 104171782 104171801 CCTAAAGAATGTCAGGTCGA 59 104171843 104179484 TTAATTATCTGCACCTTGCC 58 NA InUTR Mus musculus 50 Cdk5rap3 ENSMUSG00000018669 ENSMUST00000103152 1 1 3 80 11 96772488 96772877 CAAGAGGATGAGATCGACTG 59 96772427 96772445 TATTCCAGGAGTCTCAGCA 59 NA Mus musculus 50 H13 ENSMUSG00000019188 ENSMUST00000089059,ENSMUST00000109826 2 2 5 120 2 152521295 152521313 TCATGCACATCTTCAAGCA 59 152525994 152529739 GACTCGTAGCTGAACATCTC 59 NA Mus musculus 50 Atp6v0a1 ENSMUSG00000019302 ENSMUST00000103110 3 1 4 83 11 100882429 100882448 AGAGAAACTTCCTGGAACTG 59 100882494 100887989 GATGATGCAATTCAGCCTC 58 NA Mus musculus 50 Fyn ENSMUSG00000019843 ENSMUST00000099967 1 1 2 112 10 39249396 39251828 AAGTATGGATGGGTACCTG 58 39251904 39251922 CAGCTTCTTCATGATCTGC 58 NA Mus musculus 50 Vps54 ENSMUSG00000020128 ENSMUST00000109578 2 1 3 82 11 21163345 21164674 AAGGAACCCACAGTTACAG 59 21164717 21164738 GTAGGATCATTTAATGCTGCTG 59 NA Mus musculus 50 Mpg ENSMUSG00000020287 ENSMUST00000020528 2 1 1 60 11 32130027 32130045 ACTTCTGCTTGAATGTCTC 57 32131588 32131607 TCTAGTGCTCTTAGCAAGAC 58 NA DesignNoJunction Mus musculus 50 Hmmr ENSMUSG00000020330 ENSMUST00000020579,ENSMUST00000109302 2 2 3 122 11 40523505 40523523 GTACAATGACACAGCACAG 58 40521655 40523422 GACTTATAGCTTTCCAACTGAG 58 NA Mus musculus 50 Rad50 ENSMUSG00000020380 ENSMUST00000020649 2 1 3 122 11 53505707 53505725 GAGATCCTCACGAAGAAGC 59 53501768 53505622 TAATTCACGTTCAGCTTTCG 58 NA Mus musculus 50 Cdkl3 ENSMUSG00000020389 ENSMUST00000109080,ENSMUST00000109078,ENSMUST00000063321,ENSMUST00000109082,ENSMUST00000109081,ENSMUST00000063303,ENSMUST00000109079,ENSMUST00000109074 2 8 10 81 11 51839364 51839383 TGAGAGGACATCATCTACTG 57 51839425 51840276 CAGCTCTGGTATGAATTTCTC 58 NA Mus musculus 50 Butr1 ENSMUSG00000020490 ENSMUST00000020792 3 1 3 128 11 58733935 58733953 ACTTCTCAGTTTCAGCCAG 59 58734045 58740286 GGAATCCAGTGTCCTTCTC 59 NA Mus musculus 50 1700012B07Rik ENSMUSG00000020617 ENSMUST00000106674,ENSMUST00000020941 3 2 3 76 11 109658592 109658610 GATGAGTCCTCACAGAAGG 59 109655536 109655554 CCTTCATGTCCATAAGGTG 57 NA DesignNoJunction Mus musculus 50 Cacna1g ENSMUSG00000020866 ENSMUST00000107786 1 1 14 80 11 94321130 94323217 TTCTCATCATCTTCTCTGAGAC 59 94321071 94321089 TAGCATTGGACAGGAATCG 59 NA Mus musculus 50 Zc3h14 ENSMUSG00000021012 ENSMUST00000110105,ENSMUST00000066979 1 2 6 162 12 100017325 100017343 TGACATGGAATCCATGGTC 59 100017469 100018267 TACAAGATCTCGTGTCTGC 59 NA Mus musculus 50 Smoc1 ENSMUSG00000021136 ENSMUST00000110347,ENSMUST00000021564 2 2 2 156 12 82238998 82251655 AGATGATGGCTCTAAACCC 58 82253738 82268510 ACAGGAATGGACTTTCTCTG 59 NA Mus musculus 50 Mtr ENSMUSG00000021311 ENSMUST00000099856,ENSMUST00000110618 3 2 2 98 13 12279351 12280318 CCAAAGATCAGACTGAGGA 58 12279271 12279289 ATCAGTCTGTGTCATAGCC 58 NA Mus musculus 50 Hnrpk ENSMUSG00000021546 ENSMUST00000109849 3 1 4 84 13 58494610 58494630 TCTGAAGATCGGATCATTACC 59 58493826 58494564 TACTGTGGAAGCTGTTCTG 59 NA Mus musculus 50 Vcan ENSMUSG00000021614 ENSMUST00000109546,ENSMUST00000022114 2 2 6 89 13 89833097 89842531 ACAAGACAGGTCGATTGAG 59 89833026 89833044 CTGTTTCTTCACTGCAAGG 58 NA Mus musculus 50 Ngly1 ENSMUSG00000021785 ENSMUST00000112619,ENSMUST00000022310 2 2 2 80 14 17115973 17123288 GGGCTTAATAAGCAGAGAC 57 17123331 17123350 AACAAGCTCCACAATTATCC 58 NA Mus musculus 50 2310021P13Rik ENSMUSG00000021819 ENSMUST00000112490 2 1 2 88 14 21537181 21540767 CACCTACAATGCTCTCCAG 59 21540819 21540837 GCATATGAGGCATAGGGTG 59 NA Mus musculus 50 Tsc22d1 ENSMUSG00000022010 ENSMUST00000088906,ENSMUST00000048371,ENSMUST00000110887,ENSMUST00000100376,ENSMUST00000022587 2 5 5 65 14 76905093 76906230 GAGCAAGCTATGGATCTGG 59 76906259 76906277 CAGAACTTCCACTTCCTCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Trio ENSMUSG00000022263 ENSMUST00000100733 1 1 2 198 15 27703636 27703654 GGATGAAACCATCGAAGAG 57 27701167 27702674 AACGTAATGCTTGTCATCC 58 NA Mus musculus 50 1700019P01Rik ENSMUSG00000022388 ENSMUST00000109371,ENSMUST00000023023 2 2 2 80 15 88750105 88755968 TATCTACTGGTTCATGGCA 57 88750043 88750061 GATCTTACTCAGCAGAGCT 58 NA Mus musculus 50 Csnk1e ENSMUSG00000022433 ENSMUST00000079284 3 1 2 187 15 79251401 79251419 GATGTAGACCGGGAAAGAC 59 79251138 79251250 CTGGGAGAAGTATTGCCAG 59 NA Mus musculus 50 Plec1 ENSMUSG00000022565 ENSMUST00000071869,ENSMUST00000073418,ENSMUST00000054449 3 3 10 167 15 76024996 76025191 ACCTTATCAAGCACTGGAG 58 76023866 76023884 CAATCTGCACATTCTGCAG 59 NA Mus musculus 50 Zfp148 ENSMUSG00000022811 ENSMUST00000089677,ENSMUST00000089675 1 2 2 60 16 33496003 33496022 ACTGAGAAGAAATCGTCTGG 59 33496044 33496063 TCTTCAGGTCAGATTTGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000114002,ENSMUST00000064797,ENSMUST00000116575,ENSMUST00000023678 3 4 16 80 16 91887699 91887718 AAGGCTACATCCATGAACTC 59 91887758 91889375 GTTTCTGAAAGATCTCTGTGAC 59 NA Mus musculus 50 Pcdhgc5 ENSMUSG00000023036 ENSMUST00000066140 1 1 9 128 18 37977618 37977637 ATCTTCTCTATGGGCTAGAG 57 37992950 37992968 TATCAAACTGGTTGTTGGG 57 NA DesignNoJunction Mus musculus 50 Ube2j2 ENSMUSG00000023286 ENSMUST00000024056,ENSMUST00000105583,ENSMUST00000105581,ENSMUST00000105582 1 4 5 80 4 155320519 155323129 CCAGAAAGATGAGCAATAACAG 59 155323169 155323188 TAATTCGAAGGTAGTCCTGC 59 NA Nonspecific Mus musculus 50 Vegfa ENSMUSG00000023951 ENSMUST00000071648,ENSMUST00000074629,ENSMUST00000024747,ENSMUST00000113520,ENSMUST00000113519 1 5 6 82 17 46161443 46161461 GATCAAACCTCACCAAAGC 59 46161030 46161397 TGTCTTTCTTTGGTCTGCA 59 NA Mus musculus 50 Trem2 ENSMUSG00000023992 ENSMUST00000113237,ENSMUST00000024791 3 2 2 64 17 48488098 48488116 GGTCCTGCAGAAAGTACTG 59 48490437 48490455 GATCTCCAGCATCTTGGTC 59 NA DesignNoJunction Mus musculus 50 Wiz ENSMUSG00000024050 ENSMUST00000114463,ENSMUST00000114462 2 2 6 135 17 32518098 32524532 GAAGTGGCATTTCTGATGG 58 32505045 32505063 AGAAGTCACATCGCATCAG 59 NA DesignRelaxed Mus musculus 50 Lpin2 ENSMUSG00000024052 ENSMUST00000112649,ENSMUST00000053173,ENSMUST00000024848 2 3 5 82 17 71595848 71596176 GAACAAATCATCGTATCACAGG 59 71596219 71596237 GAAAGGCAGAATTCTGCTC 58 NA Mus musculus 50 Clip4 ENSMUSG00000024059 ENSMUST00000024854,ENSMUST00000112611 2 2 2 80 17 72152944 72152962 TTGCAGCACATAACTTGTG 58 72153004 72155854 CTTTGTCATTCCTAAAGGCAG 59 NA Mus musculus 50 Brd2 ENSMUSG00000024335 ENSMUST00000095347,ENSMUST00000025193,ENSMUST00000114242,ENSMUST00000114241 3 4 4 106 17 34250420 34250527 GAAGTAGCAACAAGCTACCT 59 34250333 34250351 ATCATAACTCATGGGCCTG 59 NA Mus musculus 50 Drap1 ENSMUSG00000024914 ENSMUST00000113674 3 1 2 133 19 5423659 5423775 GAAGATGGACTGTACCTTCC 59 5423405 5423563 ATCCTCAGACTCATCCTCC 59 NA Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000086848,ENSMUST00000111651 3 2 15 101 19 55937964 55937982 CTCAGACTTCACTGTCAGC 59 55938047 55982926 GGTACTTTGTTCGACTCCA 59 NA Mus musculus 50 Ifitm3 ENSMUSG00000025492 ENSMUST00000026565 3 1 1 73 7 148195770 148195788 TCTAGGGATCGGAAGATGG 59 148195715 148195733 ATGTTCAGGCACTTAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp711 ENSMUSG00000025529 ENSMUST00000039658,ENSMUST00000071814 1 2 3 107 X 109738388 109738406 CCATTCTGTAGCTGGAGTG 59 109738473 109741719 CTCTCATCTCTGATATCATCCTG 59 NA Mus musculus 50 Nfasc ENSMUSG00000026442 ENSMUST00000043189 1 1 2 91 1 134498612 134498630 CTATGAGATCCGAGTCCAG 58 134496783 134498557 CCCTGGGATAATCTTCTCC 58 NA Mus musculus 50 Ccdc3 ENSMUSG00000026676 ENSMUST00000027988 2 1 1 85 2 5062412 5062430 GACTTTCTCGAGTGACTGG 59 5149989 5150007 GGTCCTCTTCCTCAAACAG 59 NA DesignNoJunction Mus musculus 50 Prkcq ENSMUSG00000026778 ENSMUST00000102970,ENSMUST00000028118 1 2 3 85 2 11201144 11205379 AATTGTCTACAGGGACCTG 58 11205428 11205446 CTTTGCACATCCCAAAGTC 59 NA Mus musculus 50 St6galnac6 ENSMUSG00000026811 ENSMUST00000113290,ENSMUST00000113282,ENSMUST00000095044,ENSMUST00000072111,ENSMUST00000081879 1 5 6 86 2 32464823 32467748 TGAGTAGCAACAAAGAGCA 59 32467798 32467816 CACTGTTGGAGCTGTAGAG 59 NA Nonspecific Mus musculus 50 Gsn ENSMUSG00000026879 ENSMUST00000113016,ENSMUST00000028239 3 2 2 83 2 35159841 35159859 AGGACAAGAAGATGGATGC 59 35159906 35160116 CAGGAACCTCTTCGATCAC 59 NA Mus musculus 50 Dab2ip ENSMUSG00000026883 ENSMUST00000112997,ENSMUST00000112987,ENSMUST00000091010,ENSMUST00000112992,ENSMUST00000112980,ENSMUST00000095461,ENSMUST00000112989 2 7 13 122 2 35517137 35563177 CAATGAGAGGTCCCATCTG 59 35563263 35563281 GGCTTGATAATCACCTCCT 58 NA Mus musculus 50 Notch1 ENSMUSG00000026923 ENSMUST00000028288 2 1 3 165 2 26320485 26320594 AAGAAGTTCCGGTTTGAGG 59 26320338 26320356 CATTGACATCCATGCAGTC 58 NA Mus musculus 50 Ola1 ENSMUSG00000027108 ENSMUST00000112058,ENSMUST00000028517,ENSMUST00000112055,ENSMUST00000100015 1 4 4 80 2 72980435 72994803 CCCGAGTATGACATAATGTG 57 72980374 72980393 ATTCCAGTCATGATAGAAGC 57 NA Mus musculus 50 Snap25 ENSMUSG00000027273 ENSMUST00000028727 3 1 2 102 2 136595818 136595839 GATGGACCAAATCAATAAGGAC 59 136595900 136599640 GGATTTAAGCTTGTTACAGGG 58 NA Mus musculus 50 2210009G21Rik ENSMUSG00000027281 ENSMUST00000110094 1 1 5 111 2 136772980 136825932 CTTAAGTGTGGGAACTTCG 58 136826007 136830685 ACAGCAAACAAACTTCCTC 58 NA InUTR Mus musculus 50 Casc5 ENSMUSG00000027326 ENSMUST00000099542,ENSMUST00000028802 3 2 3 81 2 118902675 118902693 AGCGTAATAGCCAAATGGA 59 118902737 118903650 TGTCCATCCTTGAGTTTCTC 59 NA Mus musculus 50 Prnd ENSMUSG00000027338 ENSMUST00000110169,ENSMUST00000110171,ENSMUST00000110172,ENSMUST00000110170,ENSMUST00000057812,ENSMUST00000089481 2 6 6 121 2 131779017 131779035 GGATCTACTACGAAGGCTG 58 131779120 131779138 CTTGCTATCCTGCTTCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc23a2 ENSMUSG00000027340 ENSMUST00000028815 2 1 2 83 2 131886455 131886473 TGTTTGTGCTTGGATTCTC 58 131884023 131886410 CTGTTATTCCTGTAACCAGAG 57 NA Mus musculus 50 Gabpb1 ENSMUSG00000027361 ENSMUST00000089741 2 1 10 149 2 126478080 126478100 CATAATCATCAAGAGGTGGTG 58 126475900 126477971 CAGATACTCCTGTTTCATCTG 57 NA Mus musculus 50 Pex5l ENSMUSG00000027674 ENSMUST00000108226,ENSMUST00000108224,ENSMUST00000108225,ENSMUST00000078226,ENSMUST00000108221 1 5 5 80 3 32852114 32853258 AGTTGACAGCTCTGTTCTG 59 32852052 32852070 TCTGGGTCAATCATGTCAC 59 NA Mus musculus 50 2510027J23Rik ENSMUSG00000028133 ENSMUST00000039761,ENSMUST00000106467,ENSMUST00000106466 3 3 5 151 3 120859428 120861698 AAGCAACATCAAGGAGTACC 59 120859198 120859216 CTTTGACTTCAAACGCCAG 59 NA Mus musculus 50 Ctbs ENSMUSG00000028189 ENSMUST00000061937 2 1 2 80 3 146122794 146126872 ATAACTACAAGGATCCTGCTG 59 146126913 146126932 CATATGCTGCCTTTAGTGAG 58 NA Mus musculus 50 Slc5a9 ENSMUSG00000028544 ENSMUST00000102721,ENSMUST00000102720,ENSMUST00000102719 1 3 4 113 4 111571163 111571181 GTCTTTGTTCTTGCTGTGG 59 111566276 111568889 TAGAGATGCTCCAATTGGC 59 NA Mus musculus 50 Echdc2 ENSMUSG00000028601 ENSMUST00000052999,ENSMUST00000116309,ENSMUST00000106695,ENSMUST00000106694,ENSMUST00000106693,ENSMUST00000116308,ENSMUST00000106692,ENSMUST00000030338,ENSMUST00000116307 2 9 10 143 4 107842374 107842470 TGTTTGTTAGTGAGCTGCT 59 107844717 107844735 CCTCCACATCACTCATCTG 59 NA Mus musculus 50 Lrp8 ENSMUSG00000028613 ENSMUST00000106734,ENSMUST00000106733,ENSMUST00000106732,ENSMUST00000106731,ENSMUST00000030356 1 5 5 80 4 107529862 107529882 CAGAAAGATGCTGATCTTCTC 58 107529923 107531243 GTCCAGAATACCTTGTCCTC 59 NA Mus musculus 50 2810410C14Rik ENSMUSG00000028621 ENSMUST00000094921,ENSMUST00000030364 1 2 5 103 4 106746556 106753504 TTTAATCAAGTACGGCGAG 57 106753571 106753589 AGGTCTCATCATCTTCGTC 58 NA Mus musculus 50 Eif2b3 ENSMUSG00000028683 ENSMUST00000094862 1 1 4 97 4 116731372 116731392 CCCTAGGATACATTTCCACAC 59 116731451 116731801 AAGGCTGTTCGCTATTCTC 59 NA Mus musculus 50 Cyp4b1 ENSMUSG00000028713 ENSMUST00000102707 3 1 2 80 4 115308528 115308546 CATTTACTGGCTCACACCA 59 115308331 115308487 CTGATGACATGATCTGTATGGT 59 NA Mus musculus 50 Ptpru ENSMUSG00000028909 ENSMUST00000105987,ENSMUST00000030741,ENSMUST00000105985 3 3 6 121 4 131332790 131332808 CTACATCGTCCTGGATGTG 59 131332260 131332706 TATATTGTTCCTCCGTCTGG 58 NA Mus musculus 50 Sfrs4 ENSMUSG00000028911 ENSMUST00000030743 2 1 2 159 4 131442217 131447137 AAGGTATGGCTTTGTGGAG 59 131447259 131448009 ATAACCATATCCACTGCGTC 59 NA Mus musculus 50 Espn ENSMUSG00000028943 ENSMUST00000105658,ENSMUST00000105653,ENSMUST00000105659,ENSMUST00000030785,ENSMUST00000084114,ENSMUST00000070018,ENSMUST00000080042,ENSMUST00000105657,ENSMUST00000103196,ENSMUST00000105656,ENSMUST00000105655,ENSMUST00000105654 1 12 13 70 4 151504880 151504898 GTTCCTCGTCTTCTACTGG 59 151502613 151502631 AAGCTCTGAGTTATCACCC 58 NA DesignNoJunction Mus musculus 50 Espn ENSMUSG00000028943 ENSMUST00000030785,ENSMUST00000084114,ENSMUST00000080042,ENSMUST00000105656,ENSMUST00000105655 3 5 13 86 4 151503737 151504885 TACTGGCAAAGTGAGAGTC 58 151502611 151502630 AGAAGCTCTGAGTTATCACC 58 NA Mus musculus 50 Ube4b ENSMUSG00000028960 ENSMUST00000103212,ENSMUST00000084123 3 2 2 81 4 148747071 148755302 TCGTTGTCTAGTTTGGGAG 58 148747008 148747026 CTTTGCAGGTTTCAATGGT 58 NA Mus musculus 50 Ttll10 ENSMUSG00000029074 ENSMUST00000051509,ENSMUST00000105577,ENSMUST00000097731,ENSMUST00000030951 2 4 4 80 4 155421307 155421469 GGAGCATCAATAATCAGCA 57 155421245 155421263 TAGCTTGTAGTCCTCACAG 57 NA Mus musculus 50 Fip1l1 ENSMUSG00000029227 ENSMUST00000113535,ENSMUST00000080164 1 2 4 94 5 74953167 74967134 CCAAGCAGGAGATTACCTG 59 74967192 74967210 TTGCTGTTCTCATTTGCAC 59 NA Mus musculus 50 Stap1 ENSMUSG00000029254 ENSMUST00000031171,ENSMUST00000113389 1 2 2 80 5 86507018 86507036 ACAAACACTATTGGACGGA 58 86507079 86510204 ACTTGCCAACATAGATTGTG 58 NA Mus musculus 50 OTTMUSG00000010433 ENSMUSG00000029451 ENSMUST00000094522,ENSMUST00000105768 2 2 2 68 4 143440838 143440856 TTGAAGGCTGTTCTTGAGG 59 143440888 143441428 GAGTTTGCACCTACTGGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Camkk2 ENSMUSG00000029471 ENSMUST00000111668,ENSMUST00000047365,ENSMUST00000086224,ENSMUST00000111667 3 4 4 102 5 123198201 123200036 CATCTGTACATGGTGTTTGAG 58 123197984 123198002 GATCCTGGAAGTAGAAGCG 59 NA Mus musculus 50 Rbm19 ENSMUSG00000029594 ENSMUST00000031590 3 1 2 90 5 120581249 120582150 TGTTTGACCATGAGACCAG 59 120582203 120582222 TCAATAAGGAAGCTTCGGAC 59 NA Mus musculus 50 C130038G02Rik ENSMUSG00000029651 ENSMUST00000085558,ENSMUST00000110518 2 2 5 132 5 148894657 148894675 GTCTCCCATCAACCAAGAG 59 148894771 148918596 GAGGCTTTCTTGAGGTCTG 59 NA Mus musculus 50 Limk1 ENSMUSG00000029674 ENSMUST00000015137,ENSMUST00000111233 2 2 3 92 5 135138026 135140066 ATCAAGAACATGGACAGCC 59 135137708 135137727 GTTCATCGAATGGAGGTAGG 59 NA Mus musculus 50 Osbpl3 ENSMUSG00000029822 ENSMUST00000114470,ENSMUST00000114469,ENSMUST00000071728 3 3 4 113 6 50378406 50405828 CTTAGGTCTGTCCTGTGTC 59 50320341 50378330 AGTCTCAGAGGAAATCTCTG 58 NA InUTR Mus musculus 50 Osbpl3 ENSMUSG00000029822 ENSMUST00000114469,ENSMUST00000071728,ENSMUST00000114468 2 3 4 130 6 50270071 50270089 GAAACGTACGAATGCATCC 59 50259378 50262636 TTCCATCTCACATCTTGCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Prdm5 ENSMUSG00000029913 ENSMUST00000031976,ENSMUST00000031973,ENSMUST00000081219 1 3 3 108 6 65878006 65885972 TCAGTGTGACGTATGTGAC 59 65886044 65886062 CTTATGGCAGAAATGGCAC 59 NA Mus musculus 50 Bcat1 ENSMUSG00000030268 ENSMUST00000111742,ENSMUST00000116504,ENSMUST00000032402,ENSMUST00000087468 3 4 4 81 6 144952924 144952942 CTGCATATTCCAACGATGG 58 144948815 144952881 CCCTTCCATACTGGATATCAG 59 NA Mus musculus 50 Atp2b2 ENSMUSG00000030302 ENSMUST00000101045,ENSMUST00000089003,ENSMUST00000089002 1 3 3 80 6 113792179 113792197 TGGTCAAGATCAAGGAGAC 58 113767331 113792135 CTGGTAAACCTTCAACAGG 57 NA Nonspecific Mus musculus 50 Polr3e ENSMUSG00000030880 ENSMUST00000106483 2 1 2 92 7 128066451 128066469 CCAATGAAGAAGATGACCC 57 128067778 128071411 CAAGCTCTACCTGAAAGAG 57 NA Mus musculus 50 Rpgr ENSMUSG00000031174 ENSMUST00000072393,ENSMUST00000115539,ENSMUST00000115534,ENSMUST00000044598,ENSMUST00000073392,ENSMUST00000115533,ENSMUST00000115536,ENSMUST00000115532,ENSMUST00000115531 3 9 13 80 X 9776155 9779148 GCTTTGATGACAGAACTAGG 58 9776094 9776113 GAAATTCTCCATCCCAAGTC 58 NA Mus musculus 50 Cenpi ENSMUSG00000031262 ENSMUST00000081064,ENSMUST00000101251 2 2 2 81 X 130881884 130883703 GGACTTCTATGAGAAGGTGTG 59 130883746 130883764 ATGGAAGATCACAGGAGGA 59 NA Mus musculus 50 Dcx ENSMUSG00000031285 ENSMUST00000112856 1 1 4 120 X 140310405 140310423 TGAAAGGGAATCCATCTGC 59 140305238 140310321 GTTCCATTTGCTGAGTCAG 58 NA Mus musculus 50 Ctps2 ENSMUSG00000031360 ENSMUST00000112303,ENSMUST00000033727,ENSMUST00000112301,ENSMUST00000112300 2 4 7 81 X 159413146 159413164 ATTTGGGAGGAACAATGAG 57 159413208 159434652 TCACCATAAAGCTTCTTCAG 57 NA Mus musculus 50 F10 ENSMUSG00000031444 ENSMUST00000063820,ENSMUST00000033821 1 2 2 101 8 13039561 13039582 GAGTTCAAGAAAGGAAATCTGG 59 13039642 13045084 GTATTCTTTCGTCTTCTCGTC 58 NA Mus musculus 50 Cnot7 ENSMUSG00000031601 ENSMUST00000110472,ENSMUST00000034012,ENSMUST00000110474 2 3 4 90 8 41584708 41584726 TTCTTTGAGATCCTTCGGT 58 41581257 41584654 CCTGTAATCCACCTTTGAG 57 NA Mus musculus 50 BC004022 ENSMUSG00000031652 ENSMUST00000080846 2 1 3 86 8 89372443 89375532 TGATGACAGGTTTCTACTGC 59 89372376 89372394 GACTCGGTCACAAACTCTC 59 NA Mus musculus 50 Cbfb ENSMUSG00000031885 ENSMUST00000109392 1 1 4 80 8 107726407 107726428 AATTTGAGGATAGAGACAGGTC 59 107726469 107739812 TCTTCTTGCCAGTTACTGC 59 NA Mus musculus 50 Isl2 ENSMUSG00000032318 ENSMUST00000034869,ENSMUST00000114290 3 2 2 232 9 55392908 55393240 AACAGCTGGTTTCCTTCTC 59 55393436 55393454 AATAATTACAAGGGCCGGA 58 NA DesignRelaxed, InUTR Mus musculus 50 Parp16 ENSMUSG00000032392 ENSMUST00000069000 2 1 2 91 9 65081639 65084457 AGAAGAAGGATTCCAAGGA 57 65084510 65084530 GGTGACTACAAAGTACTTAGG 57 NA Mus musculus 50 Cmtm7 ENSMUSG00000032436 ENSMUST00000035009,ENSMUST00000098322 1 2 3 125 9 114671041 114671059 AGAGTTACAACCAGAGTGG 58 114666401 114667932 CAGATGCATCTGAAGACTG 57 NA Mus musculus 50 Cdv3 ENSMUSG00000032803 ENSMUST00000116517 2 1 3 76 9 103258654 103258674 GAAATATACAGTGACACGCAG 59 103258348 103258616 TTTAAGTACCTGTTCCGGC 59 NA DesignRelaxed Mus musculus 50 Tmprss7 ENSMUSG00000033177 ENSMUST00000036617,ENSMUST00000114562 1 2 2 80 16 45678010 45678029 ATCTCAAGTCCGTATTACCC 58 45674075 45677969 GAGAGTTGATAGGGAAGTCTG 59 NA Mus musculus 50 Lpp ENSMUSG00000033306 ENSMUST00000038053,ENSMUST00000115314 3 2 2 85 16 24889969 24889987 TTGTCTGTGATGTCAAGCT 59 24890034 24971925 CAGGGTATTAATGTAGCAGGG 59 NA Mus musculus 50 Armcx1 ENSMUSG00000033460 ENSMUST00000035748 1 1 6 191 X 131252984 131253266 CGACCTGCATATAAGTGGA 58 131253521 131254174 CTTGCAGATTTGATTCTGGG 59 NA InUTR Mus musculus 50 Hisppd2a ENSMUSG00000033526 ENSMUST00000110627,ENSMUST00000110629,ENSMUST00000110625 3 3 10 159 2 121157299 121157317 CAGAGATGAAGCAGAGTGG 59 121147519 121153389 CCTTCAAATCCATCTCGGT 59 NA Mus musculus 50 Pik3c3 ENSMUSG00000033628 ENSMUST00000115812,ENSMUST00000091978 2 2 2 81 18 30484209 30484230 GTGATTACGTACATTCTTGGAG 58 30484270 30492832 CTATATGGAAGAGTTTGCCTG 58 NA Mus musculus 50 Sfxn5 ENSMUSG00000033720 ENSMUST00000045846 2 1 2 80 6 85165732 85179199 CAGATGTCAGAGATTGAAACC 58 85165672 85165691 CTTATTGTACACCACTGTCC 57 NA Mus musculus 50 Tmem87a ENSMUSG00000033808 ENSMUST00000090046,ENSMUST00000090042,ENSMUST00000043847,ENSMUST00000110729 2 4 4 81 2 120197304 120197324 GAGGAACATTGTAAAGCTCTC 58 120196221 120197262 GATGAACACAATAGACGCTG 59 NA Mus musculus 50 Gas2l1 ENSMUSG00000034201 ENSMUST00000037146,ENSMUST00000056649,ENSMUST00000109895 2 3 3 98 11 4963894 4963912 GTCACTGAAATTGCCACTG 59 4962690 4963832 TAGGATCTCCCTTACCAGC 59 NA Mus musculus 50 Sema3f ENSMUSG00000034684 ENSMUST00000080560 1 1 2 129 9 107594598 107594616 AGAGTGTGGTAACTTCGTC 58 107592099 107594505 GAAGATGTAATCCTGTGCG 58 NA Mus musculus 50 Map4k5 ENSMUSG00000034761 ENSMUST00000110570,ENSMUST00000110567 3 2 3 196 12 70919485 70923807 CACTGATGTCATTATCAGAAGG 58 70917379 70919025 AACTATGCAGCATTTGTGG 58 NA Mus musculus 50 Art3 ENSMUSG00000034842 ENSMUST00000058129,ENSMUST00000113083 3 2 4 96 5 92832662 92832681 ACACTTCTACAAACAACCCA 59 92834995 92838305 TTGTTCCTACTAGCTTGCAG 59 NA Mus musculus 50 Ncapd3 ENSMUSG00000035024 ENSMUST00000073127 1 1 2 81 9 26896080 26896098 ATAGGACACGCAGTTTAGG 59 26896143 26896894 AAGGAAGATTCATGGCTGG 59 NA Mus musculus 50 Lin54 ENSMUSG00000035310 ENSMUST00000046154,ENSMUST00000094577 3 2 2 80 5 100888818 100904723 GAAGTCGCCAAATAAGACAG 58 100888757 100888776 ATGGTCTTAAACTGTGAGGT 58 NA Mus musculus 50 Ssx9 ENSMUSG00000035371 ENSMUST00000089384,ENSMUST00000103001 1 2 2 105 X 8326149 8326168 CTACTCTGATGAAGAGTGGG 58 8326236 8326553 GTTCATGGTGACACCTAGG 59 NA Mus musculus 50 Ggta1 ENSMUSG00000035778 ENSMUST00000079424,ENSMUST00000113000 3 2 8 108 2 35268941 35277711 ATATGTCAACAGGACCCAC 58 35268851 35268869 ATTGAACCAGTCCCATAGC 59 NA Mus musculus 50 Zhx3 ENSMUSG00000035877 ENSMUST00000103112,ENSMUST00000103111,ENSMUST00000109460 3 3 4 163 2 160605267 160605285 TAGAAATGGAGAGCCTGTG 58 160597347 160605140 AAATTCAGTCTGCTTCGAG 57 NA InUTR Mus musculus 50 Slc17a3 ENSMUSG00000036083 ENSMUST00000091698,ENSMUST00000110423 3 2 4 80 13 23937348 23937367 CTCTACTGAACAGCTTCCTG 59 23937408 23938757 TATCCAGTGCCCTTTATAGGA 59 NA Mus musculus 50 Skp1a ENSMUSG00000036309 ENSMUST00000037324,ENSMUST00000109072 2 2 3 89 11 52050356 52050374 GCAGAGTTCTGATGGAGAG 59 52050427 52056098 ATTCCCAAATCTTCCAGCA 59 NA Mus musculus 50 Exoc1 ENSMUSG00000036435 ENSMUST00000049469 3 1 3 168 5 76983221 76988038 AAGAAGTTTGGTCTCCATGG 59 76988169 76988187 CAAACTTGGTTCTGTCAGC 59 NA Mus musculus 50 Cdh8 ENSMUSG00000036510 ENSMUST00000067860 1 1 5 144 8 101554886 101554904 TCAAAGATGACGAAGACGT 58 101548842 101554778 AAGCCTCTTTGGTAATGGG 59 NA Mus musculus 50 Ppfibp2 ENSMUSG00000036528 ENSMUST00000098134,ENSMUST00000040056,ENSMUST00000106759 3 3 3 80 7 114862758 114862776 AAATAGAGGGAAGCTTCCG 59 114862819 114864857 ATCGTGGTGATATCTCTTGC 59 NA Mus musculus 50 Iqce ENSMUSG00000036555 ENSMUST00000041783,ENSMUST00000077890 3 2 2 80 5 141162343 141163747 CACTATCAACAAACTGCAGAC 59 141162283 141162304 TCTTCGTAGTATGTTTCCATGG 59 NA Mus musculus 50 Micall2 ENSMUSG00000036718 ENSMUST00000110848,ENSMUST00000044642 3 2 2 146 5 140185534 140185654 TCATGTACAAGTCCAAGGAC 59 140184892 140184910 TGTTCACGTATTGGCTCAG 59 NA Mus musculus 50 2310002J15Rik ENSMUSG00000036731 ENSMUST00000043379,ENSMUST00000114356 2 2 2 60 2 25094901 25094920 TCCTTCTTCATCTTCCTCCT 59 25094860 25094878 CTCTGGGATACATGTTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnk2 ENSMUSG00000037624 ENSMUST00000079451,ENSMUST00000110920 3 2 2 80 1 191119525 191119544 GCTCCAATCAAGTTAGTCAC 58 191082769 191119483 TTCCAAATCCTATGGTTGTG 57 NA Mus musculus 50 BC013672 ENSMUSG00000037921 ENSMUST00000070631 3 1 2 92 8 64437466 64442391 TTCTGGAGACAGAAGAGAC 57 64442445 64442465 GTGACTGATTCTAATGACTCC 57 NA Mus musculus 50 Igsf9 ENSMUSG00000037995 ENSMUST00000052629,ENSMUST00000111235 1 2 3 106 1 174424675 174424890 GTATATGTGCTAGGCACCAG 59 174424959 174424977 AGATAGCCACCATCAAAGC 59 NA Mus musculus 50 Serpinf2 ENSMUSG00000038224 ENSMUST00000108437,ENSMUST00000043696 1 2 2 80 11 75250276 75250294 GCCATTTCTACCAGAACCT 59 75250076 75250235 CTTTGATGGGAAATCCTTTCTG 59 NA Mus musculus 50 Snx10 ENSMUSG00000038301 ENSMUST00000049152,ENSMUST00000114439 2 2 2 80 6 51529878 51529897 ATCTTGTGTACGAAGAAGGT 58 51529940 51530309 GGTAATTGTACCAGCAACG 58 NA Mus musculus 50 Pigu ENSMUSG00000038383 ENSMUST00000077626 3 1 2 179 2 155122821 155122839 TGTGGAACCATCTCTACAG 58 155104370 155118428 CAGAGATGAGCAGGATCTG 59 NA Mus musculus 50 P140 ENSMUSG00000038453 ENSMUST00000107596,ENSMUST00000107595,ENSMUST00000064145 1 3 7 178 11 97413036 97413054 GAAGAGCAAGTACCCTCAG 59 97403856 97410196 TCCAGTAGTTTGGTTGCTG 59 NA Mus musculus 50 1700003F12Rik ENSMUSG00000038523 ENSMUST00000109709 3 1 2 82 2 154374760 154374778 GTCACAAGCAGTTCTTCAG 58 154375052 154375071 CTGAAAGAAAGGGAAAGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp280d ENSMUSG00000038535 ENSMUST00000062088 2 1 3 81 9 72186636 72186654 ATGAAACTCATTCTTGCCG 58 72186846 72208101 TGCTGTTTCTCAGAAAGAC 57 NA Mus musculus 50 AA673488 ENSMUSG00000038611 ENSMUST00000046688,ENSMUST00000106027 3 2 2 80 7 148434344 148434362 GAGCACTGCTGTATACCAG 59 148434406 148440778 ACTTTCTTTCGTCTCCCTG 59 NA Mus musculus 50 A230083H22Rik ENSMUSG00000039126 ENSMUST00000087689 2 1 3 80 19 17286190 17286786 AAGAGAAGTGTGAGACTGG 58 17290824 17290843 TTCTGGATCATTGTAAAGGC 57 NA Mus musculus 50 Lgi2 ENSMUSG00000039252 ENSMUST00000113928 3 1 2 81 5 52945808 52946917 GACTCCCTCATTGAACTAGAC 59 52945747 52945766 TCTTCAGCCATAGATACAGC 58 NA Mus musculus 50 Igfbp2 ENSMUSG00000039323 ENSMUST00000047328,ENSMUST00000080287 2 2 2 81 1 72896213 72896231 CTGGAACATCTCTACTCCC 58 72896276 72898587 TCAGAGACATCTTGCACTG 59 NA Mus musculus 50 Picalm ENSMUSG00000039361 ENSMUST00000049537,ENSMUST00000107224 3 2 3 89 7 97330798 97330816 GTAGTGGTGATGTTCACCT 58 97330866 97337668 GACTGAATCCAACAAACATCTC 59 NA Mus musculus 50 4921524L21Rik ENSMUSG00000039540 ENSMUST00000075174 2 1 2 91 18 6620230 6626325 AAACTTGGAATGAGGTGGA 58 6626380 6626398 CATCAGCTCCATCTGACTC 59 NA Mus musculus 50 Ncam1 ENSMUSG00000039542 ENSMUST00000053131,ENSMUST00000114483 1 2 4 119 9 49317900 49317918 ACTTCCTGAACAAGTGTGG 59 49316800 49317818 ACTCATCTTTCGAGAAAGCA 59 NA Mus musculus 50 Cpeb3 ENSMUSG00000039652 ENSMUST00000079754 1 1 2 98 19 37213564 37213583 CGCTGATATAATGTGGAGGA 59 37180295 37200830 TAGCTCCTGGTGTTAAGTG 58 NA Mus musculus 50 Trub2 ENSMUSG00000039826 ENSMUST00000113807,ENSMUST00000048044,ENSMUST00000113803 2 3 3 81 2 29642030 29642048 GAAGTTGACTCTCAGAGCC 59 29640519 29640537 CTTCAGGTTTGTGAATGCT 58 NA DesignNoJunction Mus musculus 50 Zfp335 ENSMUSG00000039834 ENSMUST00000041361 3 1 2 81 2 164725659 164725677 CCTTTAAGAAGCGCTACAC 58 164725517 164725614 AACTCACACTTGAATCTGC 57 NA Mus musculus 50 Rbms2 ENSMUSG00000040043 ENSMUST00000099139,ENSMUST00000092033,ENSMUST00000105247,ENSMUST00000076233 1 4 4 191 10 127580603 127582741 ACAAATGGCAAAGCAACAG 59 127575233 127575251 CACTTCTCTGTTGACTCCA 58 NA Mus musculus 50 Trim41 ENSMUSG00000040365 ENSMUST00000047145 2 1 2 80 11 48625850 48625869 TTAGGAAGCATCTAGAGGCT 59 48622770 48625807 ACTTCATCTGGCTCTTCAG 58 NA Mus musculus 50 Spns2 ENSMUSG00000040447 ENSMUST00000045303 3 1 2 147 11 72269821 72269839 TTTCTAACTGGGCCATCAC 59 72267706 72267807 ATTAGGTCCGAGATAAAGCC 58 NA Mus musculus 50 Ttc3 ENSMUSG00000040785 ENSMUST00000036349,ENSMUST00000064568 2 2 4 81 16 94649521 94650970 TGAAGAGCCAGAAGAAACC 59 94651015 94651033 ATTCTGCTTTATGCACTGC 58 NA Mus musculus 50 Sh3kbp1 ENSMUSG00000040990 ENSMUST00000073094,ENSMUST00000112456,ENSMUST00000080394,ENSMUST00000112451,ENSMUST00000112449 1 5 8 85 X 156266511 156303276 GACAATTGGGAAGAAGTTACC 58 156303323 156316062 AATCCTTGGTCTTTGTCCT 58 NA Mus musculus 50 Dcp1b ENSMUSG00000041477 ENSMUST00000073909 3 1 2 96 6 119165611 119167924 CTCCTCTTCTGCAGAACTG 59 119167983 119170025 TCATTCTGGATGAGGTTCAG 59 NA Mus musculus 50 Plekha6 ENSMUSG00000041757 ENSMUST00000086504 3 1 3 119 1 135171445 135176922 CACGATAAGATGGTCCCTG 59 135178379 135178398 TACTACCTTGTTCTGCTCAC 59 NA Mus musculus 50 Esm1 ENSMUSG00000042379 ENSMUST00000038144 2 1 1 111 13 114003654 114003672 CTTCTTCCAGTATGCAGCA 59 114006884 114006903 CCCTTCTCCAATCTCTTCTC 59 NA DesignNoJunction Mus musculus 50 Il17re ENSMUSG00000043088 ENSMUST00000058548,ENSMUST00000062146,ENSMUST00000101065,ENSMUST00000053569 3 4 5 84 6 113418938 113419028 CTTGTGTCCTGATGTCTCC 59 113419075 113419094 CAGAACTACACCCACTAGAG 58 NA Mus musculus 50 3222402P14Rik ENSMUSG00000043154 ENSMUST00000075941,ENSMUST00000066657 2 2 3 60 9 101113775 101113793 GAGCCTAAACCTATAGCCT 57 101113733 101113753 TCCTTGTTAGACAAGAAGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Casc1 ENSMUSG00000043541 ENSMUST00000111728,ENSMUST00000111727,ENSMUST00000060797,ENSMUST00000057366 2 4 4 81 6 145131788 145131806 GTACCACCTGGATGTTCTG 59 145130421 145131743 TCCTTCCTGGAGTATCTCC 59 NA Mus musculus 50 A530064D06Rik ENSMUSG00000043939 ENSMUST00000053612 3 1 2 60 17 48303335 48303353 AAATATCCACCTGGTGGTG 59 48300357 48300375 AGGAATGATGTCAGGAGTG 58 NA DesignNoJunction Mus musculus 50 Hjurp ENSMUSG00000044783 ENSMUST00000054674 2 1 3 82 1 90169330 90171624 ACACTCAGGTGATTGACAG 59 90166837 90166855 CTCCTCTAAGCTCGTATCC 58 NA Mus musculus 50 Eif4g1 ENSMUSG00000045983 ENSMUST00000115463,ENSMUST00000044783,ENSMUST00000073840,ENSMUST00000115457,ENSMUST00000115461,ENSMUST00000115460 1 6 6 80 16 20686991 20687226 CCAGTACTATCAAGGGCTG 59 20687269 20687288 AGGTAAAGCCATACATGAGG 59 NA Mus musculus 50 Phf13 ENSMUSG00000047777 ENSMUST00000055688 1 1 1 61 4 151366181 151366199 AAGACATCATGGTGGACTC 58 151365848 151365866 CTTCATGCAGAAACAGGTG 59 NA DesignNoJunction Mus musculus 50 Krt35 ENSMUSG00000048013 ENSMUST00000103127,ENSMUST00000038839 1 2 2 82 11 99955963 99956174 AGGACCAAGTATGAGACTG 57 99955899 99955917 AGATCATCCAGGATTCTGC 58 NA Mus musculus 50 Odz4 ENSMUSG00000048078 ENSMUST00000107166,ENSMUST00000107169 2 2 6 122 7 103702246 103843286 ACACAGAAACCGATCATCC 59 103843371 103843390 TGTTCAAGGAGTTGATGGAG 59 NA Mus musculus 50 Olfr1212 ENSMUSG00000048226 ENSMUST00000055895 3 1 1 91 2 88799454 88799472 TGACTCCATTGCTCAATCC 59 88799524 88799545 GACCATTCTAAATCTGTTCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Clip1 ENSMUSG00000049550 ENSMUST00000111566,ENSMUST00000111561,ENSMUST00000031382 1 3 5 80 5 124077410 124080242 AGTAGCAAGGCTAATAGCA 58 124077348 124077366 TTGATTCAAACTGTCCTGC 58 NA Mus musculus 50 Mafg ENSMUSG00000051510 ENSMUST00000058162,ENSMUST00000106182,ENSMUST00000106181,ENSMUST00000106180 1 4 4 135 11 120491137 120491156 CAATAAAGGAAACAAGGCCT 58 120490940 120490958 GATCTCTTCCTTGGAGAGG 58 NA DesignNoJunction Mus musculus 50 Il1rapl1 ENSMUSG00000052372 ENSMUST00000113966,ENSMUST00000078875 1 2 4 87 X 83993739 83993758 GAAATCCTCCCTGATATGCT 58 83993291 83993690 CAATGTATGTTCCAGTTGGG 58 NA Mus musculus 50 Zmat1 ENSMUSG00000052676 ENSMUST00000087501 3 1 3 90 X 131508558 131509869 GTACACAGCTCCTAGAATCTC 59 131508488 131508506 ATGTCATCTCCACACTCAG 58 NA Mus musculus 50 Grk4 ENSMUSG00000052783 ENSMUST00000001112,ENSMUST00000074651,ENSMUST00000114320 2 3 3 103 5 35017208 35017227 CAAACAGCCAATTGGAAGAC 59 35017293 35018774 TAACTTCGTACTCTGCCAC 59 NA Mus musculus 50 Wdr69 ENSMUSG00000053161 ENSMUST00000065436 1 1 2 80 1 83176994 83177012 TCAGACTCCTAGTGCAGAG 59 83177054 83178834 CTCTGAGAACCTTAAACAGGT 59 NA Nonspecific Mus musculus 50 Raet1e ENSMUSG00000053219 ENSMUST00000105523,ENSMUST00000065527,ENSMUST00000060105 3 3 3 108 10 21900583 21900601 CCACTGGCAAATGTTTGAC 59 21900672 21900943 AAATGTGGGTAACCATTGGT 59 NA Mus musculus 50 Prune2 ENSMUSG00000054366 ENSMUST00000112869 3 1 2 80 19 17095076 17095096 AAGATCTAAAGGAGCTGTCAG 59 17095138 17129292 CAGACTTTCTCACCTCCAG 59 NA Nonspecific Mus musculus 50 Gpc3 ENSMUSG00000055653 ENSMUST00000069360 3 1 2 81 X 49668061 49668079 ATGAATGCATTGGAAGCTC 58 49626116 49668016 AGATCATAGGCCAGTTCTG 58 NA Mus musculus 50 Trim34 ENSMUSG00000056144 ENSMUST00000106850 3 1 8 153 7 111407942 111483813 TTGAAATGGAGTCAGATCTG 57 111484188 111484206 ACATCTGCAACTTCTTACC 57 NA Mus musculus 50 Trim34 ENSMUSG00000056144 ENSMUST00000106854,ENSMUST00000106851 1 2 8 161 7 111407942 111408643 TTGAAATGGAGTCAGATCTG 57 111487423 111487441 GCCAACCTTGTATACAGAG 57 NA Mus musculus 50 Rpgrip1 ENSMUSG00000057132 ENSMUST00000111603 1 1 3 119 14 52760845 52760863 CCACGAAGAGAAACTGGAG 59 52760946 52764723 ACATCTTTGAGCTGCTCAG 59 NA Mus musculus 50 BC051142 ENSMUSG00000057246 ENSMUST00000078615,ENSMUST00000097348,ENSMUST00000114173 1 3 7 80 17 34558862 34558881 TGTTATCAATGAGGACCCTC 58 34558924 34577821 TGAGTCAGTTCGCTATCTG 58 NA Mus musculus 50 Mpp7 ENSMUSG00000057440 ENSMUST00000025129 2 1 2 161 18 7513050 7561731 CGACATGGGTCTGTATGAG 59 7461679 7461698 TTCTGCTTCTCATAGCAGTG 59 NA Mus musculus 50 Megf6 ENSMUSG00000057751 ENSMUST00000030897,ENSMUST00000071251 2 2 2 87 4 153628310 153628330 CTCTTCCAAGATGACTATGGG 59 153628379 153628659 CCAAGCAGACAAACTTCTC 58 NA Mus musculus 50 Snhg8 ENSMUSG00000058351 ENSMUST00000064032,ENSMUST00000049732,ENSMUST00000090205 3 3 3 61 14 31941889 31941907 CATCTACAGATTCCTGCCC 59 31941846 31941866 TAATCATGATCCACTCCATCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lin9 ENSMUSG00000058729 ENSMUST00000085803 2 1 2 148 1 182618263 182618405 AAATTAAGTGTCTGGCAGAG 57 182619423 182619441 CTGGATATGTGCAACATGG 58 NA Mus musculus 50 Abi1 ENSMUSG00000058835 ENSMUST00000078977,ENSMUST00000093171,ENSMUST00000114544 3 3 4 81 2 22826652 22826671 CGTCCTGTCAGGTATATTCG 59 22818009 22826610 GGTTATTTCCGTGCTTAACTC 59 NA Mus musculus 50 Sh2d3c ENSMUSG00000059013 ENSMUST00000074248,ENSMUST00000113242 3 2 3 151 2 32593070 32600282 TATGTGAAGTTCTCCAAGGAG 59 32600395 32601368 AGAGTCTCAGAGACCTCAC 59 NA Mus musculus 50 Mbtd1 ENSMUSG00000059474 ENSMUST00000063718 3 1 7 113 11 93793758 93795203 AGCATCACAGTCATCAAGAG 59 93804979 93805000 TAAGACTCCGTCATTTCTTCAG 59 NA Mus musculus 50 Obscn ENSMUSG00000061462 ENSMUST00000020732,ENSMUST00000052872 2 2 3 82 11 58864071 58864643 CAGAGTCAAAGAGCCTGAG 59 58864007 58864025 AAGTGAACTCCACATCCTC 58 NA Mus musculus 50 Cttnbp2nl ENSMUSG00000062127 ENSMUST00000098763,ENSMUST00000077548 1 2 2 80 3 104814331 104835578 CTTTAAAGGCCCAACACAG 58 104814269 104814287 GAAGAGCCATTAGAGGGTC 59 NA Mus musculus 50 Serpinb2 ENSMUSG00000062345 ENSMUST00000009356,ENSMUST00000064916 1 2 2 80 1 109420530 109421123 TTGGAATTGCTGGAAAGTG 58 109421166 109421185 AACATCATCTTCATCCAGTG 57 NA Mus musculus 50 Cnnm2 ENSMUSG00000064105 ENSMUST00000099373 2 1 2 122 19 46943113 46946155 CCTCTCCAGTTCCTTTGTC 59 46951727 46951745 AATCTGAGTGATTCAGGCC 59 NA Mus musculus 50 Zfp69 ENSMUSG00000064141 ENSMUST00000106280,ENSMUST00000106281,ENSMUST00000060000 2 3 4 106 4 120607749 120607767 ACTTATCCCAGGAGGAGTG 59 120607026 120607679 TTGATATCCTGCCACTGAC 59 NA Mus musculus 50 Rad54b ENSMUSG00000066307 ENSMUST00000095145 2 1 1 60 4 11510905 11510923 AGAGGTGAAGCAAGAAGAG 58 11510946 11510965 GAGTTGAGGATTTGAAACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000019268 ENSMUSG00000067209 ENSMUST00000112569,ENSMUST00000087187 1 2 2 60 X 150445780 150445798 CTCATCGTTGATACTCGGA 58 150436897 150436915 TGTAGATGCAGTCCTTCTC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Rex2 ENSMUSG00000067919 ENSMUST00000105725,ENSMUST00000105724,ENSMUST00000075775 1 3 4 80 4 146426632 146426650 CTCCTCACCAAGAATCTGG 59 146426693 146429720 AGGTTAATAGACACTGTGCA 58 NA Nonspecific Mus musculus 50 Rnf213 ENSMUSG00000070327 ENSMUST00000093902 3 1 2 80 11 119333115 119334688 TGCTATCAGAAACAATGAGG 57 119334731 119334749 GATACTTCTGCTACACCAC 57 NA Mus musculus 50 Rnf186 ENSMUSG00000070661 ENSMUST00000116094,ENSMUST00000094576 1 2 2 62 4 138523658 138523676 TAAGTGTCAACCGTGTAGC 59 138523702 138523720 TGACAAGAGCCAACAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4933437K13Rik ENSMUSG00000071669 ENSMUST00000115813,ENSMUST00000096273 3 2 2 81 16 11660651 11660670 ACTGATCAATGTCTGGATCC 59 11660712 11715018 CCGAATGTAGACCTGATACAC 59 NA Mus musculus 50 ENSMUSG00000073800 ENSMUSG00000073800 ENSMUST00000097978 2 1 1 89 7 144426548 144426566 CTGAAGGCCTGAATTACAC 58 144429979 144429997 TTTCCCACCTATGAATCCT 57 NA DesignNoJunction Mus musculus 50 Olfr1254 ENSMUSG00000075074 ENSMUST00000111523,ENSMUST00000099764 2 2 2 60 2 89628966 89628985 TTTGCCTGTGATATGTATCC 57 89628925 89628943 GACCAAGGAAGTAGGTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHG1 ENSMUSG00000076614 ENSMUST00000103419 3 1 3 170 12 114567206 114567225 CATACTGAGAAGAGCCTCTC 58 114564827 114565663 CCACTTTACCTTGAAGAGTG 58 NA Mus musculus 50 TRAV5-1 ENSMUSG00000076761 ENSMUST00000103570 2 1 1 60 14 53242529 53242547 AGTGTTCTGATCAACTGCT 58 53242568 53242589 GCTTATACCAAGGGAAGTAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmsb10 ENSMUSG00000079523 ENSMUST00000114050,ENSMUST00000114048 2 2 3 233 6 72907634 72907912 AAGAGACCATTGAACAGGA 58 72907419 72907437 TTTGGCAGTCCGATTAGTG 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Hist1h2af ENSMUSG00000061991 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Hist4h4 ENSMUSG00000064288 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 MGI:1925013 ENSMUSG00000069582 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Peg12 ENSMUSG00000070526 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 4931440P22Rik ENSMUSG00000074580 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-669a-1 ENSMUSG00000076023 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 IGHD2-6 ENSMUSG00000076626 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 A2A4T5_MOUSE ENSMUSG00000078264 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Gabra2 ENSMUSG00000000560 ENSMUST00000000572 2 1 1 83 5 71399214 71399233 ATGGCTCCAGGTTAAATCAG 59 71397487 71399171 CAGTATATTCACCTGTACTGGA 58 NA Mus musculus 50 Adora3 ENSMUSG00000000562 ENSMUST00000000574 2 1 1 70 3 105708070 105710226 GATATAGAACGGTTACCACTC 57 105710258 105710276 CAGAAAGGAAACTAGCCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ocrl ENSMUSG00000001173 ENSMUST00000115020,ENSMUST00000001202,ENSMUST00000115015 1 3 4 80 X 45300984 45301003 TTAATGACAGCCAATACTGC 58 45301046 45301316 TGTCTAAGGTCTCGTTTGG 58 NA Mus musculus 50 Marveld3 ENSMUSG00000001672 ENSMUST00000051430 2 1 2 67 8 112483621 112483640 AAATGCAGATACTTGTGCAC 59 112478602 112478620 ATCAGCAAGTTCAGCAGAG 59 NA DesignNoJunction Mus musculus 50 Cugbp2 ENSMUSG00000002107 ENSMUST00000002176,ENSMUST00000114934,ENSMUST00000100429,ENSMUST00000114927 3 4 5 115 2 6545761 6585174 AAACTTTACCTGGGATGCA 59 6536816 6536837 CTCGTTACATTTCTTGGAAACC 59 NA Nonspecific Mus musculus 50 Lcp2 ENSMUSG00000002699 ENSMUST00000052413,ENSMUST00000109329 3 2 2 84 11 33987235 33987253 GTGAAGGCAGAAACTTACC 58 33987300 33988046 TCTTCATCTAAGGGTGTCTC 58 NA Mus musculus 50 Fosb ENSMUSG00000003545 ENSMUST00000003640 1 1 1 114 7 19892009 19892480 CGAGAAGAGACACTTACCC 59 19891913 19891931 GAAGTCGATCTGTCAGCTC 59 NA Mus musculus 50 Eno2 ENSMUSG00000004267 ENSMUST00000072856,ENSMUST00000004378 1 2 2 80 6 124717113 124717569 CTCATCAGCTCAGGTATCTC 59 124717052 124717072 TTTATTCTCAGTCCCATCCAG 59 NA Nonspecific Mus musculus 50 Bcan ENSMUSG00000004892 ENSMUST00000090971,ENSMUST00000107573 1 2 2 80 3 87799614 87800048 ACCTAAATGGAGAACTGTTCC 59 87799554 87799572 CACGTTCCAGACAGTAGTC 59 NA Mus musculus 50 D130043K22Rik ENSMUSG00000006711 ENSMUST00000006893 3 1 1 80 13 24954543 24954561 TACTAACCTTACCGGACAG 57 24954602 24955480 CATAGGAGTAAGTTGTATCTGC 58 NA Mus musculus 50 Dennd2c ENSMUSG00000007379 ENSMUST00000007523 1 1 1 80 3 102961677 102961696 CTACTCCGTTCTTTATCGGG 59 102961739 102965483 CAACTATCAGCACCTCCTC 59 NA Mus musculus 50 2310003L06Rik ENSMUSG00000007457 ENSMUST00000007601 3 1 1 84 5 88399695 88399714 GATCCTAACTGTGATCACCT 58 88400488 88400506 TTGTTGATTGCTCTGACTG 57 NA DesignNoJunction Mus musculus 50 Rnuxa ENSMUSG00000008301 ENSMUST00000008445 1 1 1 91 18 56739947 56743956 TCATAATGAATGGTAGCCGA 58 56744010 56744028 CTTAATCTGTTCCTCGCTG 57 NA Mus musculus 50 Sardh ENSMUSG00000009614 ENSMUST00000102886,ENSMUST00000091224 2 2 2 80 2 27080539 27080557 AAGGACTACACCTACAGCA 59 27076290 27080495 TTCCTTCTGGATCATGTGG 58 NA Mus musculus 50 Rbm25 ENSMUSG00000010608 ENSMUST00000048155,ENSMUST00000010752 3 2 2 80 12 85013765 85013783 AGAGCTTGAGGAAATCAGG 58 85013827 85015299 TCTTGTTCCATCCTCTGGA 59 NA Mus musculus 50 Akt1s1 ENSMUSG00000011096 ENSMUST00000107885,ENSMUST00000054343,ENSMUST00000107882,ENSMUST00000107880 3 4 4 61 7 52108282 52108300 CTGAAACAGAGACATCTGG 57 52108325 52109163 CATCATGAAGAGACCTCCA 58 NA DesignRelaxed Mus musculus 50 Bnip2 ENSMUSG00000011958 ENSMUST00000034754,ENSMUST00000085393 3 2 2 81 9 69843927 69843946 CTTTACCAGAAGATGACAGC 58 69843989 69844903 TTAACTTCTAAGGAGCCAGG 58 NA Mus musculus 50 Scarf2 ENSMUSG00000012017 ENSMUST00000012161 3 1 1 123 16 17803848 17803866 TAATGGCACTTACGGTGAG 59 17803951 17804411 AGTTACATTACAGTGAGGTCC 59 NA Mus musculus 50 Anapc1 ENSMUSG00000014355 ENSMUST00000014499,ENSMUST00000110333,ENSMUST00000110332 3 3 3 60 2 128511612 128511630 TATGGTCTTCTGATGGTGC 59 128511570 128511588 TCATGGATTGTAACCTCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Fhod1 ENSMUSG00000014778 ENSMUST00000014922 2 1 1 80 8 107856085 107856820 TACCAACCAAGAAAGCTGG 59 107856023 107856041 CAATGTTGATGGCATTGCT 59 NA Mus musculus 50 Prpf3 ENSMUSG00000015748 ENSMUST00000015892 3 1 1 87 3 95652895 95652913 TGAGGAGGTAGAAGAGGAG 58 95651760 95652844 CATCTGTTTGATCTGGAGC 58 NA Mus musculus 50 Anp32e ENSMUSG00000015749 ENSMUST00000015893 1 1 1 80 3 95737966 95738702 GAATAAACTCCGGAAGTTGG 58 95738744 95738763 AGATTTGGACATTTCTCTGC 58 NA Mus musculus 50 Rxrg ENSMUSG00000015843 ENSMUST00000015987,ENSMUST00000111386,ENSMUST00000111384,ENSMUST00000111380 1 4 4 80 1 169564592 169564610 TGAAAGACATGCAGATGGA 58 169564654 169565845 ATAAACCCTTGGCATCTGG 59 NA Mus musculus 50 Dyrk3 ENSMUSG00000016526 ENSMUST00000016670 2 1 1 89 1 133026810 133032844 GGCTAAATATTACCACTGAGC 58 133026741 133026759 CTTGAAACAGCTGTTCCAC 59 NA Mus musculus 50 Tmprss6 ENSMUSG00000016942 ENSMUST00000017086 3 1 1 107 15 78284703 78285353 TTATCACCTCGGTCTATGG 57 78284614 78284632 CATAGTAGCTATGCATGCC 57 NA Mus musculus 50 Epb4.1l2 ENSMUSG00000019978 ENSMUST00000068469,ENSMUST00000020151,ENSMUST00000053095 2 3 8 82 10 25221426 25221636 GACGCTGTTAAGAGTTCAC 58 25221682 25221700 ATTACGCTTTCGTCTTTCC 58 NA Mus musculus 50 2610016C23Rik ENSMUSG00000019992 ENSMUST00000020167 2 1 1 96 10 20073278 20073849 AGATTTCGACATAGTCTATGGC 59 20073905 20073924 TTAGACCAGGTGATGATGGA 59 NA Mus musculus 50 1110015M06Rik ENSMUSG00000020633 ENSMUST00000020963 2 1 1 107 12 29211633 29211651 AAATGACAGTGTACCACCT 58 29209628 29211562 TAAACATCACCTTCTGCAC 57 NA Mus musculus 50 Taf15 ENSMUSG00000020680 ENSMUST00000108135,ENSMUST00000021018,ENSMUST00000092837 3 3 3 80 11 83298196 83298322 ACACCACAAGGTTATTCTGG 59 83298365 83298383 TCCATAACCGGAGTAACCA 59 NA Mus musculus 50 Eif5 ENSMUSG00000021282 ENSMUST00000050993,ENSMUST00000074417,ENSMUST00000058102 2 3 3 97 12 112778776 112779927 CCCACCTGAGAATAGTGAC 59 112779988 112780006 CACTGGTAGATACAGAGCC 58 NA Mus musculus 50 Dhfr ENSMUSG00000021707 ENSMUST00000022218 3 1 1 81 13 93127978 93135628 GAGAACTCAAAGAACCACC 57 93135673 93135691 TCCGGTTGTTCAATAAGTC 57 NA Mus musculus 50 Psmd6 ENSMUSG00000021737 ENSMUST00000022256 2 1 1 80 14 14945086 14945104 TTTATTGCTGCTGGAAGAC 58 14944885 14945042 GTTCTTGCTATCAGGTCTG 57 NA Mus musculus 50 MGI:104646 ENSMUSG00000021759 ENSMUST00000016144,ENSMUST00000070951 1 2 2 80 13 113657115 113657133 TACAAACACCACTGGAGTG 59 113657175 113657665 GGATACATACAAAGCAACCAG 59 NA Mus musculus 50 1700011H14Rik ENSMUSG00000021850 ENSMUST00000022398 3 1 1 164 14 49846469 49852497 CAGAGATCCAGGAAATCCC 59 49846323 49846342 TTCTCAAGCTCATCAGAGTC 59 NA Mus musculus 50 Gata4 ENSMUSG00000021944 ENSMUST00000067417 2 1 1 187 14 63822149 63822167 TAAATCTAAGACGCCAGCA 58 63819376 63820320 CAGTACTGAATGTCTGGGA 58 NA Mus musculus 50 Elp3 ENSMUSG00000022031 ENSMUST00000022609 1 1 1 80 14 66184299 66196771 AGGCAATCAAGTATTCTGAGAG 59 66184240 66184260 GCTTCATGCAATAATCAGGTC 59 NA Mus musculus 50 1810015C04Rik ENSMUSG00000022270 ENSMUST00000022881,ENSMUST00000110438,ENSMUST00000110439,ENSMUST00000110435 1 4 4 80 15 25899602 25899859 CTCTTTGTCCTAAGATTAGCC 57 25899901 25899919 TCCAAGAGACTTCTGACAC 58 NA Mus musculus 50 Ly6h ENSMUSG00000022577 ENSMUST00000065417 2 1 2 72 15 75395687 75395706 TTCTCAGACTATCTGATGGG 57 75395632 75395650 CAAATCTTTCTCGCAGCAG 59 NA DesignNoJunction Mus musculus 50 Yaf2 ENSMUSG00000022634 ENSMUST00000080299,ENSMUST00000109264 1 2 2 110 15 93116872 93116890 AAGAGTGAGAAGGAAGCTG 58 93115993 93116011 ATCTCCAACAGTGACTTCC 58 NA DesignNoJunction Mus musculus 50 Retnlb ENSMUSG00000022650 ENSMUST00000023328 3 1 1 100 16 48817366 48817384 TTCTCCCACTGATAGTCCC 59 48817447 48818171 GATCGTCTTAGGCTCTTGAC 59 NA Mus musculus 50 Dirc2 ENSMUSG00000022848 ENSMUST00000023554 3 1 1 99 16 35698095 35704847 TCATACAGAGTTGTCTTGGT 58 35698015 35698036 GTAGAGTCTGTCATAGGATTCC 59 NA Mus musculus 50 Brp44l ENSMUSG00000023861 ENSMUST00000046754 1 1 2 94 17 8476820 8489407 TCATGAGCACTCACTTCTG 59 8489464 8489483 CCCACTGATAATCTCTGGAG 58 NA Mus musculus 50 Spdef ENSMUSG00000024215 ENSMUST00000114870,ENSMUST00000025054 3 2 2 80 17 27854166 27854184 GTTCCTGAAAGAACTGCTG 58 27851982 27854122 TTGAAGATGCCTTTCTCCT 58 NA Nonspecific Mus musculus 50 Slc39a6 ENSMUSG00000024270 ENSMUST00000070726 2 1 1 82 18 24741004 24742534 GCCTCATGAACTAGGTGAC 59 24740940 24740960 CTGACAGAGCATTATAGAGCA 59 NA Mus musculus 50 Dtna ENSMUSG00000024302 ENSMUST00000053770 3 1 7 113 18 23704257 23707622 GAAATGCAATTCAACAGTGG 58 23707698 23707716 TCTCTTGAGGTCTCTTGAG 57 NA Mus musculus 50 Dsc2 ENSMUSG00000024331 ENSMUST00000075214,ENSMUST00000039247 3 2 2 80 18 20205714 20206786 TCCTTCAACAGATCCAGTC 58 20205652 20205672 GTTCTTTATCAACTCCTGGAC 58 NA Mus musculus 50 Drap1 ENSMUSG00000024914 ENSMUST00000025853 3 1 2 196 19 5423839 5423857 TTCTTGAAAGACTTGGTGG 57 5423403 5423562 GTATCCTCAGACTCATCCTC 58 NA Nonspecific Mus musculus 50 Xpnpep1 ENSMUSG00000025027 ENSMUST00000111747,ENSMUST00000069988 3 2 2 83 19 53086312 53086330 TTGTGGACAAGATCTGGAC 59 53084645 53086266 ACGAGATGCCTGTATAATCC 59 NA Mus musculus 50 Kcnip2 ENSMUSG00000025221 ENSMUST00000026247 2 1 3 86 19 45870812 45871588 CAGTGAAACATTAGCTGCC 59 45870170 45870188 AGTTCAAACTCATCCTCCA 58 NA Mus musculus 50 Cdh9 ENSMUSG00000025370 ENSMUST00000026432 3 1 1 81 15 16758150 16758168 GGAACAGTGCTAAAGTGGT 59 16758210 16758709 GTCTTTATTATGCCTGATTCCG 59 NA Mus musculus 50 Pip4k2c ENSMUSG00000025417 ENSMUST00000013970 3 1 1 80 10 126642869 126643682 TCACGATTACTTGGTGTCC 59 126642807 126642827 TCATAGGAGATAAGGAAACGG 58 NA Mus musculus 50 Ifitm5 ENSMUSG00000025489 ENSMUST00000026562 3 1 1 102 7 148135270 148135288 CAAGTGCTACAACATCCTG 58 148135186 148135204 TTTGGCTAACTTGGACAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rplp2 ENSMUSG00000025508 ENSMUST00000084434,ENSMUST00000106004,ENSMUST00000106003 3 3 3 136 7 148634652 148634670 ATTGAGGATGTCATCGCTC 59 148636999 148637146 TCTTTCTTCTCCTCTGCTG 58 NA Nonspecific Mus musculus 50 Dock9 ENSMUSG00000025558 ENSMUST00000100298,ENSMUST00000040700,ENSMUST00000100299 1 3 3 80 14 121996908 121996927 GACCAGTCTGAGATCAAGAG 59 121994814 121996866 ATATGTAAACAGGGCATCGT 59 NA Mus musculus 50 Arhgef9 ENSMUSG00000025656 ENSMUST00000113882 3 1 10 95 X 92326347 92360938 GTATGACGTTGCTGATCAC 58 92326270 92326288 CAGCCTTAAATGCCAACTC 59 NA InUTR Mus musculus 50 Hadha ENSMUSG00000025745 ENSMUST00000026843 1 1 1 80 5 30470828 30471784 CTGACATCAACATGCTATCC 58 30470767 30470786 TCTCAAACATTCTCTGACCT 58 NA Mus musculus 50 Zfp282 ENSMUSG00000025821 ENSMUST00000061890,ENSMUST00000114591 2 2 2 121 6 47842959 47847817 CAGAATCCATCACTGACTC 57 47847901 47847920 AGGATCTGTGGGAATATCTC 57 NA Mus musculus 50 Hk3 ENSMUSG00000025877 ENSMUST00000052949 2 1 1 80 13 55107990 55108178 TGAGATCGAAAGTGATAGCC 59 55107929 55107948 TCATCAGATGTCAGAGTCAG 58 NA Mus musculus 50 Tmem169 ENSMUSG00000026188 ENSMUST00000027380 2 1 1 115 1 72344725 72344743 GACTTCCTGGACTATCCTG 58 72347327 72347345 ATATCCACCATCTGACCCT 59 NA DesignNoJunction Mus musculus 50 Dbi ENSMUSG00000026385 ENSMUST00000027634,ENSMUST00000094616 3 2 2 101 1 122013018 122016482 TGTAAATACAGATCGGCCG 59 122010083 122010101 GTCTTCATGGCACTTTCCT 59 NA Nonspecific Mus musculus 50 5630401D24Rik ENSMUSG00000026694 ENSMUST00000028017 2 1 2 80 1 164467454 164468973 GCTACTCTTAGAGACTCCAC 58 164467393 164467412 AAATGATCGTGAACGAAGAG 58 NA Mus musculus 50 Slc25a25 ENSMUSG00000026819 ENSMUST00000028160,ENSMUST00000113310,ENSMUST00000113305,ENSMUST00000052119,ENSMUST00000113307,ENSMUST00000113308 3 6 6 90 2 32272769 32272873 CAATGGAGGTTCTGAAGAC 57 32272697 32272715 TCTTTAGCCAAGATCCTCC 58 NA Mus musculus 50 5730472N09Rik ENSMUSG00000026858 ENSMUST00000077977,ENSMUST00000100214,ENSMUST00000116543 3 3 4 80 2 30225863 30225881 CTCTTAGTGGCATCTCCTC 58 30225925 30226650 AATTGACCACTACCATCGA 58 NA Mus musculus 50 Lcn12 ENSMUSG00000026943 ENSMUST00000028312,ENSMUST00000114245 1 2 2 80 2 25347581 25347599 TAGACAAGTTCATCTGCCT 57 25346464 25347539 GTAACCAGTCACTCAAATCAG 58 NA Mus musculus 50 Trim44 ENSMUSG00000027189 ENSMUST00000090507 2 1 2 85 2 102142985 102143004 ATTTATCCCTTTGAGGCCAG 59 102141808 102142937 GTAGGTGAGTCATGGTGTG 59 NA InUTR Mus musculus 50 Stard9 ENSMUSG00000027279 ENSMUST00000028734 3 1 1 103 2 120496874 120499346 GATAGCAAACAGGATCACAG 58 120503651 120503669 GGTTGTTCTGTAGGATTGC 58 NA Mus musculus 50 Prnd ENSMUSG00000027338 ENSMUST00000110169,ENSMUST00000110171,ENSMUST00000110172,ENSMUST00000110170,ENSMUST00000057812,ENSMUST00000089481 3 6 6 125 2 131779013 131779032 GATGGGATCTACTACGAAGG 58 131779120 131779138 CTTGCTATCCTGCTTCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ampd2 ENSMUSG00000027889 ENSMUST00000102638,ENSMUST00000102637,ENSMUST00000106668,ENSMUST00000078912,ENSMUST00000106667 2 5 5 123 3 107877876 107877894 AAAGTGAGATGCTGGAGAC 59 107877771 107877789 GGTCTAATCACGGTCACAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Trim2 ENSMUSG00000027993 ENSMUST00000107692,ENSMUST00000107691,ENSMUST00000107695,ENSMUST00000107693,ENSMUST00000107694,ENSMUST00000065380,ENSMUST00000054990 3 7 7 103 3 83994504 83994522 CAGAAGGCTGTGAAGAGAC 59 83982085 83994438 TTTCTTCCTTTGGTACCGAC 59 NA Mus musculus 50 2010003O02Rik ENSMUSG00000028407 ENSMUST00000030114 2 1 1 255 4 40217277 40217295 GATAAGCGTTAACATGCCA 58 40217514 40217532 GATGTGAAGTGTTTGAGCA 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Epb4.1l4b ENSMUSG00000028434 ENSMUST00000044022 2 1 3 131 4 57032665 57032684 AGAAGTCAGAAGTCAAGAGC 59 57012587 57029731 CTCTAAAGTCTGCCAGAGG 59 NA Mus musculus 50 Pdzk1ip1 ENSMUSG00000028716 ENSMUST00000030488,ENSMUST00000106548 2 2 2 137 4 114761816 114763763 AGGTCTAGGAAACCTTCAG 57 114765534 114765552 ATGATCATCACTGTGCTCC 59 NA DesignNoJunction Mus musculus 50 Utp11l ENSMUSG00000028907 ENSMUST00000030738 3 1 1 93 4 124359717 124359735 AAATCAGAGCTCCATCTGC 59 124359553 124359661 CATCAAACCGTTCAACTTCC 59 NA Mus musculus 50 Ptpru ENSMUSG00000028909 ENSMUST00000105987,ENSMUST00000030741,ENSMUST00000105985,ENSMUST00000097860,ENSMUST00000105984 2 5 6 80 4 131343291 131343690 GTGTCTGCCTATGATCGAC 59 131343229 131343249 GTAGTTGGCAGAGATGTAGTC 59 NA Mus musculus 50 Rheb ENSMUSG00000028945 ENSMUST00000030787 1 1 1 80 5 24319665 24319683 CGTTCACCAAGTTGATCAC 59 24314241 24319621 TGGAATATTCATCCTGCCC 59 NA Mus musculus 50 4933428G09Rik ENSMUSG00000029089 ENSMUST00000030968 3 1 1 105 5 48770607 48770625 AAAGGAAGGCTTTAGGGAG 58 48770694 48771371 AGAATGAACTAGAGCTGCC 59 NA Mus musculus 50 Rgs12 ENSMUSG00000029101 ENSMUST00000030984,ENSMUST00000087684 1 2 4 86 5 35317928 35317948 GTCCTTTGGAAGATCTAGGAG 59 35341870 35362001 CCAGTCAACTCACCATCAG 59 NA Mus musculus 50 Nkx1-1 ENSMUSG00000029112 ENSMUST00000030994 1 1 1 96 5 33773775 33773793 AACAAGTTTAAGGCCACTC 57 33773697 33773715 GGAACCAGATCTTCACCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001074703.1 ENSMUSG00000029263 ENSMUST00000031189 1 1 1 80 5 108771111 108773251 CTTCTATTTCCAGGGTAATTCC 58 108773291 108773310 TCCATGTAGGTATCTAAGCC 57 NA Mus musculus 50 Vps33a ENSMUSG00000029434 ENSMUST00000031388 1 1 1 80 5 124019480 124019500 GAAGAATACAGCTTGGATCTC 58 124015076 124019438 GTAGCACTCTTTGAAAGCG 59 NA Mus musculus 50 P2rx7 ENSMUSG00000029468 ENSMUST00000031425,ENSMUST00000100737 2 2 3 98 5 123123742 123123761 CCTACTGTAAGTGCTGTGAG 59 123123822 123126686 ACACATACTTCAACGTCGG 59 NA Mus musculus 50 St7 ENSMUSG00000029534 ENSMUST00000115419,ENSMUST00000052113,ENSMUST00000081635,ENSMUST00000000674,ENSMUST00000077080,ENSMUST00000053148,ENSMUST00000115417 1 7 7 166 6 17872077 17872095 ATCTTGCACACTGGAAGAG 59 17880851 17884129 TTCATGGAAAGAGGGAAGC 59 NA Mus musculus 50 Cabp1 ENSMUSG00000029544 ENSMUST00000112109,ENSMUST00000031519 1 2 3 80 5 115626275 115630814 AGAACAGACAACCTGACAG 59 115625496 115625515 TGTCTTTGTCAAATTCTCGG 58 NA Mus musculus 50 Calu ENSMUSG00000029767 ENSMUST00000031779,ENSMUST00000090481 3 2 2 90 6 29316188 29316206 GAAAGACATAGTCGTGCAG 58 29316968 29322481 GTACATGTCACCAATGTACTC 58 NA Mus musculus 50 MGI:2141532 ENSMUSG00000029817 ENSMUST00000031841 2 1 1 80 6 49194928 49195487 ATTACCGGTACAGAAGAAGG 58 49194867 49194885 TTGGACTATAGGAACGGGA 59 NA Mus musculus 50 Rab19 ENSMUSG00000029923 ENSMUST00000031986 3 1 1 87 6 39338116 39338134 ACATTCGAATCTGTCCCTC 59 39338185 39339548 CTGATTTGTTCCCGATCAG 58 NA Mus musculus 50 Klrg1 ENSMUSG00000030114 ENSMUST00000032207 1 1 1 83 6 122223602 122223620 TTTACTGGATCGGCTTGAG 59 122221485 122223556 AGCTGTTGGTAAGAATCCTC 59 NA Mus musculus 50 Dmn ENSMUSG00000030554 ENSMUST00000074233,ENSMUST00000051389,ENSMUST00000056808 3 3 4 64 7 74884013 74884033 GAGATATTGATCTGGACTGAG 57 74881771 74881789 CGATAGGATGTGTTTCTGG 57 NA DesignNoJunction Mus musculus 50 Mfge8 ENSMUSG00000030605 ENSMUST00000107409 3 1 2 106 7 86290211 86290229 AAATGTCTGGTGACTTTGG 57 86287927 86290141 GTAGAACAACCGGTTTCAC 58 NA Mus musculus 50 Rbbp6 ENSMUSG00000030779 ENSMUST00000052135,ENSMUST00000071590 1 2 4 91 7 130119549 130122108 TAAGTCGAACTGAACCAGTG 59 130126511 130128515 ATTGGCAGTCTTTGTAAGCT 59 NA Mus musculus 50 Hsd17b14 ENSMUSG00000030825 ENSMUST00000107752,ENSMUST00000033097,ENSMUST00000107751 2 3 3 67 7 52821351 52821369 TTTGGCTTTGGATGAAAGC 59 52821497 52821515 GAGTCCAGATGTTTCCTGG 59 NA DesignNoJunction Mus musculus 50 4930404H21Rik ENSMUSG00000030976 ENSMUST00000033275 1 1 1 177 7 140787006 140793656 AGATGGTTCACTCACACTG 59 140786130 140786148 TGTCATGCACAGAGAAAGG 59 NA DesignNoJunction Mus musculus 50 Glrx3 ENSMUSG00000031068 ENSMUST00000064404 1 1 1 84 7 144636760 144644387 CATTTGTGAAGCTGGAAGC 59 144644435 144644453 TTGAAGAACAGGAAGGTGG 59 NA Nonspecific Mus musculus 50 Tmem16a ENSMUSG00000031075 ENSMUST00000033393 2 1 1 80 7 151824451 151824469 CTCCTGTATGAGGAATGGG 58 151823099 151824409 CTCACCAAAGTATTTCCTGAC 58 NA Mus musculus 50 Gpr165 ENSMUSG00000031210 ENSMUST00000033554 1 1 1 80 X 93910470 93910488 TTTGCCCAGTACTCATGTG 59 93910530 93911604 ATATAGCATCACCCTATGTCG 58 NA Mus musculus 50 Zfp185 ENSMUSG00000031351 ENSMUST00000114546,ENSMUST00000114543,ENSMUST00000033718 3 3 3 80 X 70261121 70261139 GACACCTCTGAACAATCTC 57 70261180 70262046 GAGAATCCCTTTGATAGTTGAG 58 NA Mus musculus 50 Rbbp7 ENSMUSG00000031353 ENSMUST00000112327,ENSMUST00000033720,ENSMUST00000112326,ENSMUST00000112321 2 4 4 80 X 159199636 159206788 TTCCTGAAGTGACTAAACCAG 59 159206828 159206848 TCTGCTCATCAGATGTATGAG 59 NA Mus musculus 50 Grpr ENSMUSG00000031364 ENSMUST00000033730 3 1 1 98 X 159953202 159955013 TCAAGAAGCAGATCGAATCC 59 159953123 159953141 GGTAGATGACATGGTTGGG 59 NA Mus musculus 50 Mpp1 ENSMUSG00000031402 ENSMUST00000033775,ENSMUST00000064027,ENSMUST00000114091 1 3 3 82 X 72366820 72366840 GGAAACCAAAGGAATGATCTC 58 72363276 72366776 GTGCTCTCATGAACATCTG 58 NA Mus musculus 50 Plat ENSMUSG00000031538 ENSMUST00000033941 3 1 1 81 8 23882719 23882737 CAGGCCCTGTATTTCTCTG 59 23882780 23883119 TTGCTCTGGTATCTATGTCAC 59 NA Mus musculus 50 Tmod2 ENSMUSG00000032186 ENSMUST00000064433,ENSMUST00000098552 2 2 2 80 9 75424503 75424521 GGTACCAGTTTACCAAGCA 59 75421919 75424459 TCTTCTTTCGAACCAGGTC 59 NA Mus musculus 50 BC003885 ENSMUSG00000032215 ENSMUST00000034738,ENSMUST00000113505 1 2 2 119 9 72962704 72962722 TTCTGCAAATCCAAGTGTC 58 72962805 72964228 TTCAAATGAGTTGTCCACC 57 NA Nonspecific Mus musculus 50 Cmtm6 ENSMUSG00000032434 ENSMUST00000035007 1 1 1 145 9 114646442 114646460 CACGACAGAGTGGATACTG 59 114649268 114655567 AAGCCAAACACAATTGCAG 59 NA Mus musculus 50 Dbr1 ENSMUSG00000032469 ENSMUST00000066650 2 1 1 81 9 99482510 99482744 GACTTCCTTCAGGTGTTAGAG 59 99482786 99482805 GAACAGTAAGCCATTCAACG 59 NA Mus musculus 50 Nradd ENSMUSG00000032491 ENSMUST00000035069 2 1 1 96 9 110524755 110525600 GTCTATTCAGATACAGCCCTG 59 110524679 110524697 ATAGGGAGGAGGTATTGGG 59 NA Mus musculus 50 Pthr1 ENSMUSG00000032492 ENSMUST00000006005 2 1 1 102 9 110634113 110634133 CGATGTCTTTACCAAAGAGGA 59 110632223 110634049 CATTATGTTGGCTGCTGTG 59 NA Mus musculus 50 Gtf3c1 ENSMUSG00000032777 ENSMUST00000055506,ENSMUST00000106423 1 2 2 80 7 132799430 132801010 ATGAACTACAAGGTCTGTCTG 59 132799370 132799388 GTAGTTACCCTTCCGACTC 58 NA Mus musculus 50 Itgbl1 ENSMUSG00000032925 ENSMUST00000049681,ENSMUST00000100289,ENSMUST00000038582 3 3 3 190 14 124060696 124060714 GATATGCGAGACCTACGAC 59 124227111 124239793 GACATGTACCTGCATTGGA 59 NA Mus musculus 50 Tmprss7 ENSMUSG00000033177 ENSMUST00000036617,ENSMUST00000114562 3 2 2 80 16 45678010 45678031 AAATCTCAAGTCCGTATTACCC 59 45674077 45677970 GAGTTGATAGGGAAGTCTGG 59 NA Mus musculus 50 Slitrk5 ENSMUSG00000033214 ENSMUST00000095558 2 1 2 218 14 112080264 112080282 CACCAGTACCAACAATTCC 58 112080748 112080766 TAGTGGAGCAGTGTTTGTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Spg11 ENSMUSG00000033396 ENSMUST00000036450 3 1 1 80 2 121927430 121927450 TTACTCCGTCTTCACAATCTC 59 121923981 121927390 TCTCTTCTACCTGTCTTAGGT 59 NA Mus musculus 50 AW554918 ENSMUSG00000033632 ENSMUST00000097643 2 1 2 91 18 25333906 25333924 AAAGTTAAGGCTTCCAGGG 59 25333979 25340566 TTGCAGAAATTCTGTTCGG 58 NA Mus musculus 50 Ddx19b ENSMUSG00000033658 ENSMUST00000065784,ENSMUST00000040241 2 2 2 108 8 113547888 113547908 AACTTGCATCTTAAGGAGGAG 59 113544984 113546307 CAGCTCTGTCCTCTTTCTC 59 NA Mus musculus 50 B3galt2 ENSMUSG00000033849 ENSMUST00000038252 2 1 1 60 1 145493430 145493450 ATCCTGTGACATACACTTTCC 59 145493472 145493490 GAGCTATGGTTTGTCTCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pds5b ENSMUSG00000034021 ENSMUST00000016569,ENSMUST00000038900,ENSMUST00000110486 2 3 3 80 5 151578083 151580735 AGATATTTGAGCCTCTGCA 58 151580777 151580797 TATGACCAATAGTGACCAGAG 58 NA Mus musculus 50 Atm ENSMUSG00000034218 ENSMUST00000037440 3 1 1 80 9 53294970 53294989 ACTGAAGGATCTTCGAAGAC 59 53294200 53294927 TGTGGGTTATCTTGAGACG 58 NA Mus musculus 50 Traf3ip1 ENSMUSG00000034292 ENSMUST00000047242 3 1 1 102 1 93422669 93424202 CAGGAGCAGAGTATCACAG 59 93424268 93424286 TCACAGCACAGATCTTGTC 59 NA Mus musculus 50 Ppm1h ENSMUSG00000034613 ENSMUST00000067918 3 1 1 83 10 122344603 122344621 GGGACCATGACTTAAAGGT 58 122344668 122357765 GATCGTAGACTCTGACCTC 58 NA Mus musculus 50 Cobll1 ENSMUSG00000034903 ENSMUST00000112431,ENSMUST00000102726,ENSMUST00000112430,ENSMUST00000090896,ENSMUST00000072921,ENSMUST00000112422,ENSMUST00000068356,ENSMUST00000112432 1 8 9 80 2 64989079 64989099 AAGATATTGAGCTCTCAGTGG 59 64974587 64989038 AGTCCATCATTGGCTTACTG 59 NA Nonspecific Mus musculus 50 4933434I20Rik ENSMUSG00000035057 ENSMUST00000038692 1 1 1 259 8 85892089 85892872 CCTTGGATTTATAGGGAAACTC 58 85895604 85903136 AATTATCCTTGAGGTGCTG 57 NA DesignRelaxed Mus musculus 50 Epn1 ENSMUSG00000035203 ENSMUST00000108570,ENSMUST00000098845,ENSMUST00000045277 1 3 3 119 7 5044976 5045506 GGAGCACGATAAGGAAGAG 59 5046560 5046578 TCAGCAAGATCCATGAGAG 58 NA Mus musculus 50 Arx ENSMUSG00000035277 ENSMUST00000113947,ENSMUST00000046565 1 2 2 69 X 90532074 90532092 ATCAGTACCAGGAAGAGGG 59 90532125 90532143 GAGGAGAGCAAAGTTGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Shq1 ENSMUSG00000035378 ENSMUST00000113312,ENSMUST00000089245 1 2 2 80 6 100598281 100605269 GATCCCGATCATTATCTAGCTG 59 100598222 100598240 ATCATTCCACCAAGGACTG 59 NA Mus musculus 50 Nme5 ENSMUSG00000035984 ENSMUST00000079287,ENSMUST00000115774 2 2 2 82 18 34738266 34738284 CAAGCCAGATGTTGTTGAC 59 34731306 34738222 GTTTCCGTCTCTGAATAATGG 58 NA Mus musculus 50 Hist1h1c ENSMUSG00000036181 ENSMUST00000040914 1 1 1 267 13 23831032 23831050 CAAACTCAACAAGAAGGCG 59 23831281 23831299 TGGCTTTACGGCTTTAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fut7 ENSMUSG00000036587 ENSMUST00000100320 2 1 3 72 2 25279477 25280412 CTACAGTTCAAGGGTACCA 58 25280448 25280466 ATGAATGTTGCTCCTCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dennd3 ENSMUSG00000036661 ENSMUST00000043414 1 1 1 80 15 73395053 73395450 GTTCCTCGAAAGTGAACTG 58 73395493 73395512 TGATGTAGATGACAGAGTCC 58 NA Mus musculus 50 Bbs7 ENSMUSG00000037325 ENSMUST00000108156,ENSMUST00000040148,ENSMUST00000108155 2 3 3 80 3 36503440 36504619 TAATGGAGATGGAGGTGAC 58 36503378 36503397 GTTGTGATCTGAATAAGCCC 58 NA Mus musculus 50 Phc3 ENSMUSG00000037652 ENSMUST00000046624 3 1 2 81 3 30847672 30847690 TGTACAGTCTGACATCCCT 59 30841560 30847629 GGTTAAATTCTGAACCTGAGC 59 NA Mus musculus 50 D9Ertd280e ENSMUSG00000037681 ENSMUST00000042158 1 1 1 85 9 99215659 99215678 GAAGAGATCACTGGATGTCG 59 99212402 99215611 AGTCAATCAGCACTTTCCC 59 NA Mus musculus 50 Prosapip1 ENSMUSG00000037703 ENSMUST00000045761,ENSMUST00000110260,ENSMUST00000089561 3 3 3 60 2 130461196 130461522 AAACTAAGTGGGAGGTGTG 59 130461154 130461172 TTCAGTTGTTGCTTCAGGA 59 NA DesignRelaxed Mus musculus 50 Bank1 ENSMUSG00000037922 ENSMUST00000041577,ENSMUST00000106270 3 2 2 85 3 135718756 135720367 TCCAAGTGGTAATACTGCC 58 135717410 135717428 TTTCAACTTGGATTCGAGC 58 NA Mus musculus 50 Fkbp14 ENSMUSG00000038074 ENSMUST00000046520,ENSMUST00000114394 1 2 2 92 6 54535862 54535880 CTGGAAATTCGAAATGGCC 59 54529672 54535809 CACTTTAACCTCATGCTTAGAG 58 NA Mus musculus 50 Txnip ENSMUSG00000038393 ENSMUST00000074519,ENSMUST00000049093,ENSMUST00000090771 3 3 3 81 3 96363703 96363721 AGAGTGCAGAAGATCAGAC 58 96363766 96363876 GGACACTGACGTAGATCAG 59 NA Mus musculus 50 Scube3 ENSMUSG00000038677 ENSMUST00000043503,ENSMUST00000074355 1 2 2 80 17 28305160 28305180 ATCAACTTCAAGACCAGTGAG 59 28305222 28305340 CTGCTCATAGTCCTCATCG 59 NA Mus musculus 50 Abcf1 ENSMUSG00000038762 ENSMUST00000043757,ENSMUST00000087205 1 2 2 181 17 36096928 36097069 TGGCTCAATAACTACCTTCAG 59 36096620 36096638 TTTAGCAGCTCTTTCTGCT 59 NA Mus musculus 50 Wdr93 ENSMUSG00000039099 ENSMUST00000035622 3 1 1 80 7 86894973 86894993 GGCTGATGTTATTTCCATCTG 59 86895034 86897343 CTCACAATACCCATTTCGTC 58 NA Mus musculus 50 Adk ENSMUSG00000039197 ENSMUST00000045376 2 1 1 84 14 22137367 22137388 GTCATGCCTTATGTTGATATCC 58 22188319 22200734 TGTCTTTAGTCTCAAAGCCT 58 NA Mus musculus 50 Rpl39l ENSMUSG00000039209 ENSMUST00000044103 2 1 1 78 16 10170557 10170576 AAATCTGGTTTAAACTCGCC 58 10174406 10174424 TGAAGGTCTTGTGAGAAGC 59 NA DesignNoJunction, InUTR Mus musculus 50 E130309D02Rik ENSMUSG00000039244 ENSMUST00000046418 2 1 1 82 5 144073445 144073463 GATCTTTAGTGCCAGTCCT 58 144069811 144073399 TGAGGTCATCTGATGACAG 58 NA Mus musculus 50 Spdyb ENSMUSG00000039296 ENSMUST00000085733,ENSMUST00000110742 2 2 2 143 5 143986616 143986635 CTTAGGATGAGGCTGAAGAG 59 143983094 143983668 CAGGAGGTACTTGTCTGAC 59 NA Mus musculus 50 Icmt ENSMUSG00000039662 ENSMUST00000048892 3 1 2 105 4 151673861 151673879 CTCCTTCCTCCTGAATCAC 59 151673947 151674662 GGTAATCTGCTTCAGTTCTG 58 NA Mus musculus 50 Wdr34 ENSMUSG00000039715 ENSMUST00000113711,ENSMUST00000045622 3 2 2 82 2 29887644 29887662 CACAAGTACCTGTTTGCTG 58 29887480 29887598 AGTTGTACATCACCTTCCC 58 NA Mus musculus 50 Zfp597 ENSMUSG00000039789 ENSMUST00000090522 3 1 1 82 16 3866727 3871166 GAATTTGGACTCGATAGGAGG 59 3866665 3866683 ACAGCTCTTCAAGTTCCAC 59 NA Mus musculus 50 Phtf2 ENSMUSG00000039987 ENSMUST00000037298 3 1 1 80 5 20309165 20311490 TTCTCTATCTTCTCCAAGTTGC 59 20309106 20309126 TCACTTCAGTTAGAGGTATGC 59 NA Mus musculus 50 Ptger3 ENSMUSG00000040016 ENSMUST00000041175 1 1 2 80 3 157268042 157268060 GAACCAGATCTTGGATCCC 59 157268104 157306852 AGGTTGTTCATCATCTGGC 59 NA Mus musculus 50 Zfp704 ENSMUSG00000040209 ENSMUST00000041124 3 1 1 295 3 9474540 9474558 TGGTATTGACCAGCTTGTC 59 9452356 9470902 CATGGAGTTCTTTCTCTTCC 57 NA DesignRelaxed Mus musculus 50 Lyrm5 ENSMUSG00000040370 ENSMUST00000111725,ENSMUST00000039729,ENSMUST00000111724,ENSMUST00000111726,ENSMUST00000111723,ENSMUST00000111721,ENSMUST00000111719 3 7 7 108 6 145163790 145163887 ATCTGCTGTATCTTGGACG 59 145163959 145163977 TTGATCTTCTCTGGGTCCT 59 NA DesignNoJunction Mus musculus 50 Apoc1 ENSMUSG00000040564 ENSMUST00000045035 1 1 2 83 7 20277781 20277799 CTTCCTGTCCTGATTGTGG 59 20277341 20277359 CAATGTTCCGGACAAATCC 59 NA DesignNoJunction Mus musculus 50 Npnt ENSMUSG00000040998 ENSMUST00000093971,ENSMUST00000042729,ENSMUST00000042744 3 3 3 82 3 132569428 132569671 TATCAGTGCCATGACATCG 59 132569364 132569384 GACCCATGTATGTTGTAACAC 58 NA Mus musculus 50 Osgin2 ENSMUSG00000041153 ENSMUST00000037198 1 1 1 88 4 15933561 15933579 ATCGGAAGCAATACATCCA 58 15932683 15933511 GGTATTCTAAGTCCTGATCCA 58 NA Mus musculus 50 5730559C18Rik ENSMUSG00000041605 ENSMUST00000048668 2 1 1 208 1 138116912 138117660 TCCTGGAGGAAGAAGACTC 59 138116722 138116740 GAGCTCAGAAGACTTCCTG 59 NA DesignRelaxed Mus musculus 50 D11Wsu47e ENSMUSG00000041623 ENSMUST00000042227,ENSMUST00000093915,ENSMUST00000106621 2 3 3 96 11 113550526 113553051 GTCTCGAAAGTTCCTTGGT 59 113553110 113553129 AGAGTCTCATTAGAGGGAGG 59 NA Mus musculus 50 Utp15 ENSMUSG00000041747 ENSMUST00000040972 3 1 1 80 13 99023644 99023662 CACCTCCTACAAAGTCGTC 59 99022833 99023602 ATCGTCTCATCTTGATGAGAG 59 NA Mus musculus 50 Cd1d2 ENSMUSG00000041750 ENSMUST00000041920 3 1 1 104 3 86791722 86791740 AAGTCAGACCTAGAGAAGC 57 86792263 86792284 TGGGTAGAAAGAGACATGAC 58 NA Mus musculus 50 AW549877 ENSMUSG00000041935 ENSMUST00000046633 3 1 1 81 15 3938634 3938654 CCTGTCCAGTTAAATGAAGGT 59 3936462 3938593 GGATGTCACTAAAGACTCCTG 59 NA Mus musculus 50 2010003K11Rik ENSMUSG00000042041 ENSMUST00000048482 2 1 1 167 19 4498290 4498308 AAGAACAGCTGATCCAAGG 59 4497512 4497530 AGCTTTAGTTGTTGGTGTC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ccdc115 ENSMUSG00000042111 ENSMUST00000042493 1 1 1 97 1 34495734 34495752 TTCAGGGTGATCAAAGCTG 59 34494664 34494682 AACTCTTTGGTCTTGGTGG 59 NA DesignNoJunction Mus musculus 50 Unc84b ENSMUSG00000042524 ENSMUST00000100439,ENSMUST00000046259,ENSMUST00000089311 3 3 3 93 15 79560581 79560599 CTCTCCTAGAAGGGTTGGT 59 79559975 79560524 GTAGCCAATTCTTCCTGGA 58 NA Mus musculus 50 Sh2b3 ENSMUSG00000042594 ENSMUST00000086310,ENSMUST00000040308 1 2 2 136 5 122269034 122269128 CTTTGTGTTGAAGGTGCAG 59 122268832 122268850 AAAGAGGTAACTCGGTGTC 58 NA Mus musculus 50 Foxf1a ENSMUSG00000042812 ENSMUST00000050684 1 1 1 60 8 123610701 123610719 TTCTATGCATACAACAGGC 57 123610743 123610761 GATGTCTTGGTAGGTGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Klhl6 ENSMUSG00000043008 ENSMUST00000058839 2 1 1 81 16 19957052 19957070 TCTTATTAGACAGTGCCCT 57 19953776 19957007 CGAAATGATCTCATTGCCA 58 NA Mus musculus 50 A530016L24Rik ENSMUSG00000043122 ENSMUST00000057465 3 1 1 288 12 113733318 113735076 CTGAGAGGGATGGTAACAG 58 113736150 113736168 TACAGGACCAGTACCACTC 59 NA DesignRelaxed Mus musculus 50 Mobkl1b ENSMUSG00000043131 ENSMUST00000038658 3 1 3 81 6 83280015 83288281 ATTGCTGTTAATAGTGTCCC 57 83288325 83288343 CATAAACCCTGAAGAGACG 57 NA Mus musculus 50 C030030A07Rik ENSMUSG00000043298 ENSMUST00000068293,ENSMUST00000111894 3 2 2 60 6 136779798 136779817 AAGTTATGAGAAGCACCTGG 59 136779757 136779777 GATAGCATGATGGTACTTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gprasp1 ENSMUSG00000043384 ENSMUST00000113147,ENSMUST00000113145,ENSMUST00000113144,ENSMUST00000070053,ENSMUST00000057164 1 5 5 109 X 132332145 132332164 ACTGTCTCAAATCTCTGGAG 58 132332394 132332570 AAAGCAGGACAATCTCCAG 59 NA InUTR Mus musculus 50 Sorcs1 ENSMUSG00000043531 ENSMUST00000076049,ENSMUST00000072685,ENSMUST00000111756 3 3 3 80 19 50316578 50327036 TGACCTTTATGAGGTAGCAG 58 50316517 50316537 GTGATGAAAGTCTTCACTTGG 59 NA Mus musculus 50 Ubxd3 ENSMUSG00000043621 ENSMUST00000105811,ENSMUST00000105810,ENSMUST00000068172,ENSMUST00000105809 3 4 4 70 4 138276810 138276828 TACCAAGAGGATTCAAGCC 58 138276758 138276777 CGGATGATGAACTTCTTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 4933402P03Rik ENSMUSG00000044084 ENSMUST00000056941 1 1 1 83 11 69631428 69631551 AAACAGAAGTAGTCCAGGT 57 69631363 69631381 GGATACAGTGGATGTGGAC 59 NA DesignNoJunction Mus musculus 50 Ffar1 ENSMUSG00000044453 ENSMUST00000052700 2 1 1 60 7 31645739 31645758 TGTGGCTAGTTTCATAAACC 57 31645698 31645717 TGTGATGAGTCCTAACTTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tst ENSMUSG00000044986 ENSMUST00000058659 2 1 1 190 15 78236251 78236270 TGACACTATGGTACATCAGG 58 78236080 78236099 CTATATCAAAGAAGGACGCG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Pnoc ENSMUSG00000045731 ENSMUST00000059339 3 1 1 81 14 66024020 66029970 CAGCTTCAACTTAAAGACGT 58 66023958 66023976 GACTTTGGTGCATACAGTC 58 NA Mus musculus 50 Ankrd41 ENSMUSG00000046295 ENSMUST00000060324 2 1 1 63 8 73931601 73931619 CCAGAGGACACTATCTACG 58 73931646 73931785 CTATGCCCTACATCAGCAC 59 NA DesignRelaxed Mus musculus 50 Sox18 ENSMUSG00000046470 ENSMUST00000054491 3 1 1 75 2 181404977 181404995 CATGTCCTGTCCAGAAGAG 59 181404920 181404938 GCAAGCACTGTAATAGACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pkd1l1 ENSMUSG00000046634 ENSMUST00000055297 3 1 1 80 11 8790707 8790725 AGACCTATCCTCAGAGGAC 59 8790531 8790663 TGGATTTCTCTTGTGCAGG 59 NA Mus musculus 50 Olfr981 ENSMUSG00000046678 ENSMUST00000059859 2 1 1 60 9 39830804 39830823 CTACACAGTCATTACTCCCT 58 39830845 39830864 CATCTGTTTGTTTCGTAGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp787 ENSMUSG00000046792 ENSMUST00000094870 3 1 1 84 7 6094714 6094732 GAGAAGAAGCTTGGTCTCC 59 6084758 6094666 ATGATGAGGATGTCCACTG 58 NA Nonspecific Mus musculus 50 D030056L22Rik ENSMUSG00000047044 ENSMUST00000062753,ENSMUST00000055792 1 2 2 81 19 18791744 18791762 GTATTGGAGGAACCCTCTG 59 18791807 18791825 CTCAAGTGTCTCTGTCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 C2cd3 ENSMUSG00000047248 ENSMUST00000051777,ENSMUST00000098259 3 2 2 80 7 107523030 107528484 CTCGTATCTGACAGATATGGC 59 107528526 107528544 ATCTGAACTCTGCCAACAG 59 NA Mus musculus 50 A530099J19Rik ENSMUSG00000047462 ENSMUST00000062514 2 1 1 60 13 19821525 19821543 TATCATTGTGTTGCACTCC 57 19821483 19821501 GAGATAGTAACTGAGGCGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Inhbe ENSMUSG00000047492 ENSMUST00000059718 1 1 1 116 10 126788401 126788419 CAGAATAACTCGGCCTCTG 59 126788067 126788323 TCTATGATGGTAGCAAAGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr367 ENSMUSG00000049094 ENSMUST00000054726 2 1 1 94 2 37126793 37126812 TGTTTATACAATGGTCACCC 57 37126869 37127046 TTCTAGTCCAGTCTTTCCA 57 NA Mus musculus 50 1700040F17Rik ENSMUSG00000049155 ENSMUST00000050395 1 1 1 60 15 55267947 55267965 CTAGTACTGAGACAGAGCC 58 55267905 55267923 TCACTCATCGAAACACTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sertad2 ENSMUSG00000049800 ENSMUST00000093292,ENSMUST00000109586,ENSMUST00000109585 2 3 3 60 11 20548479 20548498 TTGAAATAACAACGTCCACG 59 20548520 20548539 GCAAACAAGATGTCATCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2810025M15Rik ENSMUSG00000049881 ENSMUST00000061537 2 1 1 298 1 159343922 159350013 AACAGCTCTCCAAGATCAG 58 159350275 159350293 AGTAGCACTTCTACTGGTC 57 NA DesignNoJunction, InUTR Mus musculus 50 Scd4 ENSMUSG00000050195 ENSMUST00000058856 1 1 1 80 19 44412057 44412076 GAACCTATAAAGCAAGGCTG 58 44412118 44413415 ATTCATACACGTCATTCTGG 57 NA Mus musculus 50 Gp1ba ENSMUSG00000050675 ENSMUST00000055184,ENSMUST00000108551 1 2 2 60 11 70453138 70453157 TGTACCTGGATAGATGTGAG 57 70453179 70453198 TCCAGCTTTATCAGTTTACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem125 ENSMUSG00000050854 ENSMUST00000060214 1 1 1 106 4 118215278 118215296 TCTGACAGTTTGTCCTGTC 59 118214961 118215208 CTATGGTTACCCTCACCTC 58 NA InUTR Mus musculus 50 1110005A23Rik ENSMUSG00000051255 ENSMUST00000056396 2 1 1 185 19 23750883 23750901 GATTGTGACAAGTTCAGCT 57 23751047 23751068 GTAGATAGATACGTAGGTAGGG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Kctd14 ENSMUSG00000051727 ENSMUST00000050732 2 1 1 60 7 104603449 104603467 AAGGTCATCTATGGAGCCA 59 104606107 104606125 CTCCTACATTCAGCTCCAC 59 NA DesignNoJunction Mus musculus 50 Cd209f ENSMUSG00000051906 ENSMUST00000078702 2 1 1 82 8 4103652 4103671 ATACATGAAGTTCCTGGCA 58 4103216 4103234 TCCGTCATTGTTAGGTTCC 59 NA Mus musculus 50 Jam2 ENSMUSG00000053062 ENSMUST00000114195 3 1 2 182 16 84819008 84821510 AAACTTCCTTCCAGAAGGG 59 84823139 84823158 TCTTCATCACTTTGCAAGTG 58 NA InUTR Mus musculus 50 Olfr212 ENSMUSG00000053251 ENSMUST00000075756 3 1 1 75 6 116466198 116466217 ACCTCTACATTATCCAACCA 57 116466255 116466273 GAATCCCAAAGCTAAGCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cyp2b13 ENSMUSG00000053435 ENSMUST00000065861 2 1 1 115 7 26735315 26735334 TATTTCTACTCCTGGTCAGG 57 26735412 26735430 CTTAAGAAGACCGCCTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hs6st3 ENSMUSG00000053465 ENSMUST00000065904 3 1 2 61 14 119538295 119538313 CCATCATGGAGAAGAAGGA 58 119538335 120268123 GATGTAGTAGAAATTCCTGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Eif3k ENSMUSG00000053565 ENSMUST00000066070,ENSMUST00000108260 2 2 3 65 7 29756453 29757565 AGATTGACTTTGACAGTGTG 58 29756407 29756425 TTTATTAACGCACACTGGC 58 NA DesignRelaxed, InUTR Mus musculus 50 Mettl7a ENSMUSG00000054619 ENSMUST00000067752 3 1 2 64 15 100143525 100143543 ATGGATGCAATCTGACGAG 59 100143571 100143589 CTTTAGCTTCGAGAAGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Klhl18 ENSMUSG00000054792 ENSMUST00000068025,ENSMUST00000084956,ENSMUST00000111934 2 3 3 149 9 110334944 110334962 AGACCTACTCACCTGAGAC 59 110331507 110332453 GTTGTAGTGTTCCACACTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Agtr1b ENSMUSG00000054988 ENSMUST00000068316 1 1 1 60 3 20214699 20214720 TATACTCTGATTTGGAAAGCCC 59 20214660 20214678 TCCTTGGCGTATTCTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ankrd17 ENSMUSG00000055204 ENSMUST00000081914,ENSMUST00000014421 3 2 2 80 5 90671940 90671959 ACATCAGTCAGATACTTCCA 57 90668167 90671897 TTGACAATACCTGAGGGAC 58 NA Mus musculus 50 ENSMUSG00000055456 ENSMUSG00000055456 ENSMUST00000069051 3 1 1 60 11 42850191 42850211 GAAGCTACCATATGTGACCTC 59 42850231 42850251 TCTAGTATAGAACACTGGCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 6030405A18Rik ENSMUSG00000056306 ENSMUST00000070342 3 1 1 112 3 54719080 54719098 TTCGGATAAGTTCTTCCCG 59 54703717 54703736 TTAAACAAAGGCAGCAACAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Cd248 ENSMUSG00000056481 ENSMUST00000070630 1 1 1 60 19 5069786 5069806 CTATCACTTATTTGCCTCCAG 58 5069828 5069846 GCTTTAGAAGTGGTATCCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mpz ENSMUSG00000056569 ENSMUST00000070758 3 1 2 115 1 173085767 173088498 TTCTCTTCTTTGGTGCTCTC 59 173088576 173088594 CATTCACTGGACCAGAAGG 59 NA Mus musculus 50 Fkbp2 ENSMUSG00000056629 ENSMUST00000070878 2 1 1 85 19 7053519 7053538 GATTGGAGTGAAGAAACGTG 59 7053151 7053471 CTAGCTTTCCCGTGTAGTG 59 NA Mus musculus 50 ENSMUSG00000056771 ENSMUSG00000056771 ENSMUST00000071101 3 1 1 77 6 128150316 128150334 TTTCCCAGACAGTAGAGTC 57 128150257 128150275 ACAATCCCAGATTGATCCT 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 2900006K08Rik ENSMUSG00000057265 ENSMUST00000081828 3 1 1 84 12 85769320 85769338 TAGAGATTTGACCTGGGAG 57 85769386 85770964 ACTGTATTTCCTAGCAGCA 58 NA Mus musculus 50 Olfr934 ENSMUSG00000057424 ENSMUST00000074211 2 1 1 60 9 38790380 38790398 CCAAGATGCTGTTCTACCT 58 38790338 38790357 CAAACACAGCCTGTATAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Speer4f ENSMUSG00000058643 ENSMUST00000076099 3 1 1 90 5 16985319 16985337 ATTCAACAGCATTTGGACG 59 16985390 16986142 TTTCTGAGACCTGATGTTCC 59 NA Mus musculus 50 Olfr498 ENSMUSG00000058679 ENSMUST00000074787 3 1 1 60 7 115609416 115609434 TCTGATGTCACTGTTGCTG 59 115609457 115609476 TTGTCAGTGTGATAAAGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Defb4 ENSMUSG00000059230 ENSMUST00000081017 1 1 1 60 8 19198745 19198766 TACCTTCTCTTCACATTTCTCC 59 19198787 19201191 TAATTTGGGTAAAGGCTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mug1 ENSMUSG00000059908 ENSMUST00000032228 1 1 1 80 6 121800361 121801414 TGCATGTGGGAAATATACCT 58 121801457 121801475 CATCCAGTCTCAGTCTCAC 59 NA Mus musculus 50 EG245190 ENSMUSG00000060814 ENSMUST00000078533 2 1 1 68 7 106774218 106774236 CCTCTTACGTCTTCTTCGG 59 106774168 106774186 TTAGGTAGAGCACCATGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 AI597468 ENSMUSG00000060935 ENSMUST00000095383 2 1 1 81 10 84573544 84573562 GTGATCATGAATCAGGCAG 58 84573605 84577167 GATCTTTCATTGACCCTTCTG 58 NA InUTR Mus musculus 50 ENSMUSG00000063754 ENSMUSG00000060938 ENSMUST00000101014 1 1 2 85 11 68715928 68716688 AGGATGACGAAGTTGTTCG 59 68716734 68716755 GTAGATGACGTACTTCTTCCTG 59 NA Nonspecific Mus musculus 50 Tmem151a ENSMUSG00000061451 ENSMUST00000077066 1 1 1 60 19 5082629 5082647 CACAGGTCTACCATGAGAG 58 5082587 5082605 GCACTGTAGTCAAACTCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 V1rb8 ENSMUSG00000061653 ENSMUST00000075797 1 1 1 60 6 89926232 89926250 TTGGGATCTCAGCTAACAG 58 89926274 89926292 CTTTCACCAAGGAACATGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ssbp3 ENSMUSG00000061887 ENSMUST00000030367,ENSMUST00000097934,ENSMUST00000072753,ENSMUST00000106761,ENSMUST00000097933 1 5 5 85 4 106712631 106718931 GGTCTAACTTTCCAATGGG 57 106718980 106718998 TAGGGATCCATTCATGTGG 58 NA Mus musculus 50 Slc25a3 ENSMUSG00000061904 ENSMUST00000076694 1 1 1 80 10 90580056 90580796 TTACATAGCTGGAGTCTTCTG 58 90579996 90580016 CTGCCTTTCTCTTTATTCAGC 59 NA Mus musculus 50 Lcn13 ENSMUSG00000062061 ENSMUST00000077667 1 1 1 93 2 25556279 25556297 CCAGTCACAAGATACCCAG 59 25556351 25556607 CCATTGTTCCAGAATACAACTG 59 NA Mus musculus 50 AI413582 ENSMUSG00000062753 ENSMUST00000080190 2 1 1 81 17 27701555 27701573 CTCTATGGTGGGCTATGTG 59 27701341 27701510 CTGCACATACATTACCACG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Calml3 ENSMUSG00000063130 ENSMUST00000077698 2 1 1 60 13 3803068 3803086 GTGGACGAAATGATACAGG 57 3803026 3803045 ACTCCTCATAGTTCACTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr339 ENSMUSG00000063287 ENSMUST00000071437 3 1 1 60 2 36276945 36276963 TGTCTGAGTTCATCCTCCT 59 36276986 36277005 ACAGAGTACAAAGCTTGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Alg11 ENSMUSG00000063362 ENSMUST00000110737,ENSMUST00000072572 1 2 2 75 8 23176345 23176363 TTACTTGTCTGAAGCGACC 59 23176402 23178369 CATACACTCGACAACTCCA 59 NA DesignNoJunction Mus musculus 50 Fbln2 ENSMUSG00000064080 ENSMUST00000041544,ENSMUST00000113498 2 2 2 81 6 91218581 91218599 CTATGGCTCCTATCAGTGC 59 91218644 91219095 ACACTCATCGATGTCTGTG 59 NA Mus musculus 50 Olfr926 ENSMUSG00000064333 ENSMUST00000078289 2 1 1 60 9 38685596 38685614 GATCCCAATGCTAAATCCC 57 38685637 38685656 CAGAGCAGTCTTTACATCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr586 ENSMUSG00000066268 ENSMUST00000084811 1 1 1 60 7 110270922 110270941 CTGTGCTTCTCATTATGTCC 58 110270881 110270901 GTGTATCTCAGAGGGTTACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Irx6 ENSMUSG00000066273 ENSMUST00000106910 2 1 3 92 7 109862055 109862073 TATGTGTACCTTGTGGTGC 59 109861720 109862000 GTTTAGCACTCTGAACATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Serpina1a ENSMUSG00000066366 ENSMUST00000072876,ENSMUST00000085056 2 2 2 73 12 105093956 105093974 ATCTGGAGCAAACTCTCAG 58 105093016 105093919 GATCTGGGCTAACCTTCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Iqcf5 ENSMUSG00000066382 ENSMUST00000085113 2 1 1 60 9 106418086 106418104 AATAGTCAAACTGCAGTCC 57 106418127 106418146 CAAACGACAGTATCGATGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Klri1 ENSMUSG00000067610 ENSMUST00000088046 2 1 1 60 6 129653346 129653364 ATCACTTCATCCTCTTCGG 58 129648919 129648938 GTCACTGGAACAAAGATCAC 58 NA DesignNoJunction Mus musculus 50 Zic3 ENSMUSG00000067860 ENSMUST00000088631 3 1 3 115 X 55285407 55286549 CCATACAGGTGAGAAACCT 58 55286628 55286646 AGATATAGGGCTTGTCCGA 59 NA Mus musculus 50 Gm608 ENSMUSG00000068284 ENSMUST00000096063 2 1 2 81 16 44212778 44212798 CCTTTAAGTACATAACGGAGC 58 44212841 44215537 ATTTCTTCAGCTTGTTCGC 59 NA Mus musculus 50 C330011K17Rik ENSMUSG00000069206 ENSMUST00000057241 2 1 2 86 13 67532440 67532458 TTGGTAACATGTCTGGAGC 59 67527288 67532391 ATTGCCTGTTATTCCTGGAG 59 NA Mus musculus 50 V1ri9 ENSMUSG00000069297 ENSMUST00000091737 1 1 1 60 13 22336907 22336926 TACTTGGTTATGCTGTTCTC 57 22336949 22336967 TTAGCAACAGGGACATCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 2310047D13Rik ENSMUSG00000069808 ENSMUST00000094014 2 1 1 80 11 76018944 76020636 TACCTATTTCACAGAAGCTCC 59 76020678 76020696 ACGGAGTACTCAATTCTGC 59 NA Mus musculus 50 2310047D13Rik ENSMUSG00000069808 ENSMUST00000094014 3 1 1 80 11 76018942 76020633 TGTACCTATTTCACAGAAGC 57 76020676 76020694 GGAGTACTCAATTCTGCTG 57 NA Mus musculus 50 BC080695 ENSMUSG00000070618 ENSMUST00000061196,ENSMUST00000105774 3 2 2 176 4 143161040 143161058 AGCCTTCATTGACAGACAC 59 143161197 143161693 TGAAGCTTCCTCTTTCTTGG 59 NA Mus musculus 50 Cntnap5a ENSMUSG00000070695 ENSMUST00000043725,ENSMUST00000094621 3 2 2 80 1 118343317 118351580 GCAGGAAAGAAATTTCAGCT 59 118351623 118351641 TCTTGGTCACTGGATATGG 58 NA Mus musculus 50 Gtsf1l ENSMUSG00000070708 ENSMUST00000094653 3 1 1 101 2 162912948 162912967 CCAATGTTCGTCCTTAAGAG 58 162912866 162912884 AGTCTGAGGATCTTCTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG574429 ENSMUSG00000070799 ENSMUST00000094798 2 1 1 60 7 19060679 19063644 CAACATCCACAAGCTTGTG 59 19060637 19060656 TACTCTAACTGTGCTGTCTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Pcnp ENSMUSG00000071533 ENSMUST00000114444 2 1 1 60 16 56018633 56022180 TGAAGATGAAGATAGTGAGCC 59 56018593 56018613 GTTCTTCATCCTCATCTTTGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Olfr1320 ENSMUSG00000071764 ENSMUST00000096449 3 1 1 60 X 47037188 47037206 AGCTTGAATTTCTGTGGAG 57 47037229 47037248 GAAGAGGTTTCAAGTCACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Q3UP94_MOUSE ENSMUSG00000072593 ENSMUST00000100684 2 1 1 60 11 84684614 84684632 ACCCAGATAAGACTTGGGT 59 84684656 84684674 TCCATTCTCCTAGACCTCG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 OTTMUSG00000005162 ENSMUSG00000073145 ENSMUST00000101517 3 1 1 138 11 11596091 11596109 ATACCATGGGAGTCTTCCT 59 11595293 11595989 TCTTCTCTTCTGGAGACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 EG432637 ENSMUSG00000073168 ENSMUST00000110973,ENSMUST00000101547 2 2 2 60 12 22186385 22186406 CTCTACAAAGATATGATGCTGG 58 22186146 22186366 CCCAAGTGTAGCCTATAACAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Speer4c ENSMUSG00000073208 ENSMUST00000095005 3 1 1 73 5 15217486 15218724 GGGATCCATGAACAAGAGG 59 15217431 15217452 TCTCCTTCTCCTTTAACTTCAG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Pex10 ENSMUSG00000073686 ENSMUST00000097750 1 1 1 246 4 154417487 154417505 CTTTCTGCAAAGATGCACC 59 154417715 154417733 CTGGTCTTGGGACTTTCAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Gm833 ENSMUSG00000073699 ENSMUST00000097769 1 1 1 73 4 152073097 152073115 TTTGACTTTCAGCTGGAGG 59 152073152 152073170 CACCTTTCCCATCAGAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:96020 ENSMUSG00000073940 ENSMUST00000098192 1 1 1 175 7 110961298 110961970 GATCCTGAGAACTTCAGGC 59 110961141 110961160 TTGTGCATAGACAATAGCAG 57 NA DesignNoJunction, InUTR Mus musculus 50 Osgin1 ENSMUSG00000074063 ENSMUST00000098365 1 1 1 80 8 121967173 121968864 AAGAAATGCAGAGGTCTCC 59 121968907 121968926 TTTCTTGATCACGTAGTCCC 59 NA Mus musculus 50 Amy2 ENSMUSG00000074268 ENSMUST00000098673 1 1 1 80 3 113054538 113054664 CGTCAAATCAGGAACATGG 58 113054476 113054495 GTTGCTGTTATTATCCCACC 58 NA Nonspecific Mus musculus 50 2410076I21Rik ENSMUSG00000074269 ENSMUST00000098674 3 1 1 107 9 58500906 58505574 ATCGAGCTCAGTCTATCCT 59 58500817 58500836 GATCCATGAGACATAAGCGT 59 NA Mus musculus 50 2410141K09Rik ENSMUSG00000074832 ENSMUST00000091541 1 1 1 99 13 66519747 66534362 ACATACAAGGCCACATGAG 59 66519187 66519205 CCTCTTAGAGATCCTCGGT 59 NA Mus musculus 50 ENSMUSG00000074875 ENSMUSG00000074875 ENSMUST00000099456 3 1 1 82 13 60433210 60433228 AGACGTCCATACACATGTG 59 60433273 60433292 CTTCAACTCTGGAATTCTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074940 ENSMUSG00000074940 ENSMUST00000099590 1 1 1 60 2 112202016 112202036 CGTGAATCTAAGCAAGAAGAC 59 112201976 112201994 AAACCTCCATACCCTTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Hist1h4b ENSMUSG00000075029 ENSMUST00000099701 1 1 1 67 13 23848312 23848330 CATTCATTGCTGGTTTGGA 58 23848263 23848282 AGAATACAAGCATCATGCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1229 ENSMUSG00000075095 ENSMUST00000111549 1 1 2 80 2 89127192 89127213 AGGTATCTTCTGGAATGAACAG 59 89124818 89127154 AATATGCTTGTACTGTCTCTGG 59 NA InUTR Mus musculus 50 Olfr1167 ENSMUSG00000075134 ENSMUST00000099832 2 1 1 60 2 87990139 87990158 TGAATCAGAGTTCTGCTACC 59 87990098 87990116 TGGAGCTGTGGATATTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1106 ENSMUSG00000075164 ENSMUST00000099867 2 1 1 60 2 86888801 86888820 ACACATCCATGAATGAACTG 58 86888760 86888779 AGTGTAGTTATGGCAATGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Hoxb2 ENSMUSG00000075588 ENSMUST00000100523 2 1 1 90 11 96213422 96213440 AAATCCACCAAGAAACCCA 59 96213494 96214266 CATCTGATGGTGATCCGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 B130006D01Rik ENSMUSG00000075596 ENSMUST00000100534 3 1 1 60 11 95587747 95587766 AACGTATTTACCCATGTTGG 58 95587789 95587807 AATGAACAAATGGGCTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-72 ENSMUSG00000076545 ENSMUST00000103346 2 1 1 188 6 69177149 69177345 GCTAATCAGTGCTTCAGTC 58 69176979 69176997 TTGGATGTGGCATAAATCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-57 ENSMUSG00000076556 ENSMUST00000103357 2 1 1 297 6 69526255 69526448 CAGTCATAATGTCCAGAGGA 58 69525977 69525995 TAACTACTCCTTTGCTGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV7-33 ENSMUSG00000076575 ENSMUST00000103376 3 1 1 60 6 70008909 70008929 ACATTGTGATGACTCAGTCTC 59 70008869 70008888 ATGGTGACCTTCTTACTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV6-4 ENSMUSG00000076678 ENSMUST00000103487 2 1 1 61 12 115644965 115644983 ATGTGAACCTGGAAGTGTC 59 115644922 115644940 AAAGAGTTGCATGGATCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-55 ENSMUSG00000076717 ENSMUST00000103526 2 1 1 74 12 116446489 116446507 CTACTGGATAACCTGGGTG 58 116446433 116446454 CCACTACCAGGATAAATATCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S49 ENSMUSG00000076720 ENSMUST00000103529 3 1 1 60 12 116550606 116550624 CCTCAGTGAAGATGTCCTG 59 116550564 116550584 CAGTTTATACCGTAGCTTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074617 ENSMUSG00000078233 ENSMUST00000105030 3 1 1 60 3 41091695 41091715 TTGCTCTGTATATCCAACCAC 59 41091655 41091674 TGTTTAAGGTTCTGGTTTCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 A2A4M0_MOUSE ENSMUSG00000078257 ENSMUST00000105054 1 1 1 60 11 99698880 99698899 GCATTTCTAGTTACTGCAGG 58 99698839 99698857 GAACAGTAGGAGTGGTAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000010965 ENSMUSG00000078502 ENSMUST00000097794 2 1 3 61 4 145212750 145213106 CAGAGAATTCATACAGGAGAG 57 145213129 145213147 TGGGTAAAGCATTTGTCAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Hivep3 ENSMUSG00000078582 ENSMUST00000084306 3 1 1 171 4 119487322 119487343 GAATAATTGAAGAAGGGTGCTG 59 119544721 119544739 TTCTTCCTGTTCTTCAGGC 59 NA DesignNoJunction Mus musculus 50 Ifna5 ENSMUSG00000078641 ENSMUST00000107138 1 1 2 121 4 88473767 88473785 ATCACTGTGTACCTGAGAG 57 88473870 88474138 GATTCGTCCTCACTCAGTC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 LOC100043857 ENSMUSG00000078759 ENSMUST00000108097 2 1 1 79 7 32497753 32497890 CTTCAGGAGGAGATTGTGG 59 32497933 32497951 ATACTCCTCTGAGGTTCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Evi2a ENSMUSG00000078771 ENSMUST00000052383 2 1 2 281 11 79341290 79341427 AAAGATAGCAGTGGACCTG 58 79341027 79341045 AGATGTGGAAGCTAAAGGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Sirpb1 ENSMUSG00000078781 ENSMUST00000091319,ENSMUST00000108356 3 2 2 158 3 15548722 15548740 CAAAGAGAAACAACCTGGA 57 15543245 15548601 ATGGTTTAGCAAGTACTGAC 57 NA Mus musculus 50 2810047C21Rik ENSMUSG00000078803 ENSMUST00000098830 1 1 1 80 7 10458382 10459549 CCAGAAAGAAGACTGTTTATCC 58 10458323 10458341 TGAGAGTCATCAAGCAGTG 59 NA Nonspecific Mus musculus 50 Etohi1 ENSMUSG00000078891 ENSMUST00000109033 3 1 1 80 2 175597209 175597229 GATGCTTCTCAGAAGAGTCTC 59 175596938 175597169 TTCCCAACTGTAACCTATAGC 59 NA Nonspecific Mus musculus 50 0610010B08Rik ENSMUSG00000078899 ENSMUST00000109050,ENSMUST00000109049,ENSMUST00000099016 3 3 3 80 2 175153019 175153038 ATCCTTCTCAGAAGAGTCTC 57 175152753 175152979 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 NP_001091446.1 ENSMUSG00000079006 ENSMUST00000109890 3 1 2 110 2 150913918 150913936 AACTTTATGTTGCTGCCTG 58 150913315 150913846 CTAAATGCTCTGATACCATGG 58 NA Nonspecific Mus musculus 50 Q3U0N9_MOUSE ENSMUSG00000079150 ENSMUST00000110900 1 1 1 80 14 76110739 76110760 GTACACCATGTAAACTGTACAC 59 76110801 76110821 TACAGTATACATCGTGCCG 58 NA Mus musculus 50 Cd209g ENSMUSG00000079168 ENSMUST00000111011 1 1 1 80 8 4136889 4137268 CTCAAACTCAGCTTCTGGA 59 4137309 4137330 CCATTTATCTTCTGCCATTACC 59 NA Mus musculus 50 Rab9 ENSMUSG00000079316 ENSMUST00000049435 3 1 2 113 X 162896270 162900262 GAACTGAACTACTAAGGATTCG 58 162896178 162896196 AGAGAACTCTTGCCAACTC 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 1700001E04Rik ENSMUSG00000079409 ENSMUST00000100920 2 1 1 60 14 3190380 3190399 TTTCCATGAAGTTCTCCGAG 59 3190422 3191117 TTCTGCTTGATGCTGTAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Mmrn1 ENSMUSG00000079549 ENSMUST00000114267 3 1 1 123 6 60879294 60894321 ATTTCCAGCTTCTCAGAGG 58 60894408 60894426 CAGGTTTCTGTGTTTGCAG 59 NA InUTR Mus musculus 50 LOC436420 ENSMUSG00000079558 ENSMUST00000088537 1 1 1 165 9 51829125 51829143 CAACAACCAACACCAACTG 59 51811294 51811312 AACAATCTCCACTTTGCCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Q8CBJ2_MOUSE ENSMUSG00000079616 ENSMUST00000084357 3 1 1 243 X 40178748 40180226 CACACTCAGTTTGATTTCGT 58 40178524 40178542 CAAATAACAGGCATGGCAG 59 NA DesignRelaxed, InUTR Mus musculus 50 Cypt15 ENSMUSG00000079619 ENSMUST00000115114 3 1 1 72 X 36699538 36699558 AGTATCCTGTCGTCTTAAGTG 58 36699591 36699610 CTCATCACAACATTTGTAGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ssxb3 ENSMUSG00000079701 ENSMUST00000089374 3 1 2 101 X 8165802 8166272 AAGAATATCTGCAAGGCCT 58 8165719 8165738 TTTCATGTACATGTAGGCAC 57 NA Nonspecific Mus musculus 50 Ifnz ENSMUSG00000079855 ENSMUST00000094981 1 1 1 60 4 88443742 88443760 TATCTGAAGGCAAAGGCAC 59 88443784 88443802 CTTGCAATTGGACTCTGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Dpp9 ENSMUSG00000001229 ENSMUST00000038794,ENSMUST00000113056 2 2 2 121 17 56345039 56345132 GAATGGCTTTATGGTGTCC 58 56344936 56344954 CACTGTTGTTGATGAAGGA 57 NA Mus musculus 50 Rarg ENSMUSG00000001288 ENSMUST00000043172,ENSMUST00000063339 3 2 2 83 15 102070712 102071499 GTCCAAGGAAGCTGTAAGG 59 102070647 102070665 CTCAGTTCATAGCTGTCGG 59 NA Mus musculus 50 Efnb2 ENSMUSG00000001300 ENSMUST00000001319,ENSMUST00000098947 2 2 2 81 8 8622441 8623162 TGAAAGTTGGACAAGATGC 58 8622378 8622396 GTACCAGCTTCTAGCTCTG 59 NA Mus musculus 50 Brpf1 ENSMUSG00000001632 ENSMUST00000113122,ENSMUST00000113117 3 2 5 90 6 113268635 113268654 AAATGGGCATTGACTTTGAG 59 113268705 113269044 TCTTCCTCTACATCTTCAGTG 58 NA Mus musculus 50 Gramd3 ENSMUSG00000001700 ENSMUST00000116636,ENSMUST00000070166 3 2 2 80 18 56651643 56656981 CACAGTACTGAGCAGACAG 59 56657025 56657043 TGTAAGTTCTTGGCAGAGG 59 NA Mus musculus 50 Hoxd13 ENSMUSG00000001819 ENSMUST00000001872 1 1 1 60 2 74508129 74508147 GGTTTCAGAATCGAAGGGT 59 74508171 74508189 GAGACAGTGTCTTTGAGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cugbp2 ENSMUSG00000002107 ENSMUST00000002176,ENSMUST00000114934 3 2 5 108 2 6475005 6481729 AATGCACTAGCAGGTATGG 59 6474915 6474933 GAATTCCTGAGTAGGCCTG 59 NA Nonspecific Mus musculus 50 Clcn3 ENSMUSG00000004319 ENSMUST00000110301,ENSMUST00000004430,ENSMUST00000110300 2 3 6 98 8 63454597 63454615 ATGAGGAGCTCCTAGATGG 59 63420200 63454537 TATAATGAGTTCCAGCTGCTG 59 NA Mus musculus 50 Emid2 ENSMUSG00000004415 ENSMUST00000111103,ENSMUST00000057497 3 2 2 108 5 137312604 137323354 GGACTCTCATTAGACCGAC 58 137241224 137312533 TTCATACATTCTTCCTCGCA 59 NA Mus musculus 50 Chn2 ENSMUSG00000004633 ENSMUST00000046856,ENSMUST00000114402,ENSMUST00000114401,ENSMUST00000067741 2 4 4 80 6 54236110 54236128 ACTGGTGTGAATACTGTGC 59 54236170 54240278 GTACGTTTAACCCACAATCTG 59 NA Mus musculus 50 Slc2a9 ENSMUSG00000005107 ENSMUST00000067872,ENSMUST00000005238 3 2 3 130 5 38827879 38827898 TATCTCAACGAGATCTCACC 58 38783053 38827786 TAGAACCAGATCCTTCCCA 59 NA Mus musculus 50 Zfp592 ENSMUSG00000005621 ENSMUST00000005761,ENSMUST00000107353 3 2 2 80 7 88182345 88182363 AAGACTGCCAGTAGTACGA 59 88182404 88182703 CTTATAAATTAGCTGGGAGGGT 59 NA Mus musculus 50 Uqcc ENSMUSG00000005882 ENSMUST00000109632,ENSMUST00000109636,ENSMUST00000088667 1 3 6 102 2 155735148 155736100 GTAAATGGAAGATCAAGATCGC 59 155727070 155727088 AATGTATCGGGCATCTGAC 59 NA Mus musculus 50 Tmbim1 ENSMUSG00000006301 ENSMUST00000113796,ENSMUST00000016309 3 2 3 81 1 74339071 74339416 GTGTCCTATGCTGTCTTCC 59 74338286 74338304 TGATGTTCCATGGGAATCG 59 NA Mus musculus 50 Gtpbp3 ENSMUSG00000007610 ENSMUST00000007754,ENSMUST00000095259 2 2 2 203 8 74014335 74014353 CTTATCCGTGCAGAAACTG 58 74015048 74015066 CAGTGACCACAACATTTGC 59 NA DesignNoJunction Mus musculus 50 Zfp179 ENSMUSG00000010086 ENSMUST00000054927,ENSMUST00000102661,ENSMUST00000058348 1 3 4 90 11 61264823 61264841 CGATCTGGGCTATCTAGAG 58 61264390 61264483 TAAGAGATCCAGATGCTGG 58 NA Mus musculus 50 Zfp179 ENSMUSG00000010086 ENSMUST00000054927,ENSMUST00000102661,ENSMUST00000058348 2 3 4 92 11 61264823 61264841 CGATCTGGGCTATCTAGAG 58 61264388 61264482 ACTAAGAGATCCAGATGCTG 58 NA Mus musculus 50 Mett10d ENSMUSG00000010554 ENSMUST00000100858 2 1 3 85 11 74617333 74617352 GTGGTATAGCTGTATGCTGG 59 74617400 74630387 GTTTACTTGGAGGTGACCC 59 NA Mus musculus 50 Etv5 ENSMUSG00000013089 ENSMUST00000051229 2 1 2 172 16 22421940 22435964 TTCAGTCTGATAACTGCTCTC 59 22412944 22412962 ATACTTAGCACCAAGAGCC 59 NA Mus musculus 50 Bicc1 ENSMUSG00000014329 ENSMUST00000105435,ENSMUST00000105434,ENSMUST00000105433 1 3 4 80 10 70393392 70393410 CAGATCAGGATCTGAAGGA 57 70390534 70393348 AGTCACAAACTGAGATTGC 57 NA Mus musculus 50 Adamts13 ENSMUSG00000014852 ENSMUST00000102891 1 1 2 87 2 26852356 26852374 CTGTACCTCACTCCAAGTG 59 26852425 26860272 ACTTTCCATCTAGCAGGAC 58 NA Mus musculus 50 Sqstm1 ENSMUSG00000015837 ENSMUST00000015981 3 1 2 108 11 50014440 50016023 CATCTACAGAGGCTGATCC 58 50014350 50014370 TAATTCTTGGTCTGTAGGAGC 59 NA Mus musculus 50 E2f3 ENSMUSG00000016477 ENSMUST00000102948,ENSMUST00000091673 3 2 2 132 13 30012031 30012049 TCAGATGGTCTAAAGACCC 57 30010599 30010617 TGAACTTCTTGGTGAGCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Dbndd2 ENSMUSG00000017734 ENSMUST00000109350,ENSMUST00000069385,ENSMUST00000109349,ENSMUST00000017878 2 4 4 85 2 164314129 164314148 TATTGATCTTGCGGATCAGG 59 164314196 164315644 CATCCACTCCAGACATCTG 59 NA Mus musculus 50 Ctsa ENSMUSG00000017760 ENSMUST00000017904,ENSMUST00000103093,ENSMUST00000103092,ENSMUST00000109323,ENSMUST00000109319,ENSMUST00000109318 3 6 7 109 2 164659609 164659629 AGGATGAAATCGATTGTCTCC 59 164659700 164659829 CTCCACAAACCAGTAGTGG 59 NA Mus musculus 50 Mapt ENSMUSG00000018411 ENSMUST00000106995 2 1 10 81 11 104171782 104171801 CCTAAAGAATGTCAGGTCGA 59 104171844 104182679 GTAGACTATTTGCACCTTGC 58 NA Mus musculus 50 Hebp2 ENSMUSG00000019853 ENSMUST00000020000 3 1 1 98 10 18264082 18264100 AGACAGAGCTGAAATGACG 59 18261070 18261089 CTCAGAATGTTTGCTAAGGT 57 NA DesignNoJunction Mus musculus 50 9430073N08Rik ENSMUSG00000019909 ENSMUST00000020064 1 1 1 60 10 51309876 51309894 CTATAGAGGACATCCCACC 57 51307077 51307095 GCCTTGTTCCTTGAAACAG 59 NA DesignNoJunction Mus musculus 50 Vps26a ENSMUSG00000020078 ENSMUST00000105447,ENSMUST00000020272,ENSMUST00000092473 1 3 3 116 10 61926504 61927394 AGATCACAGGAATTGGACC 58 61921782 61921803 CTGCTAAGAACAATCTTATCGG 58 NA Mus musculus 50 Grb10 ENSMUSG00000020176 ENSMUST00000109653,ENSMUST00000078449,ENSMUST00000093321,ENSMUST00000079913 1 4 6 91 11 11854810 11854828 TAAGAACCAGTGTCCAACC 59 11851653 11854756 CTTTGACATCCTTTCTGAGC 58 NA Mus musculus 50 Slc36a1 ENSMUSG00000020261 ENSMUST00000108872,ENSMUST00000020499,ENSMUST00000108867 2 3 3 89 11 55038546 55039476 CATTGGAGTGGTTCTACCC 59 55039529 55039547 ACAGTGATGATAGCCATCC 58 NA Mus musculus 50 Acsl6 ENSMUSG00000020333 ENSMUST00000093106,ENSMUST00000108902,ENSMUST00000000145,ENSMUST00000108904,ENSMUST00000108905,ENSMUST00000072178,ENSMUST00000101211,ENSMUST00000101213,ENSMUST00000108899,ENSMUST00000064690,ENSMUST00000094194,ENSMUST00000108900 2 12 12 93 11 54140784 54141910 CAGGCTATAGAGGACTGTG 58 54143451 54143470 TTGTACCACTTGTGAAACAC 58 NA Mus musculus 50 OTTMUSG00000001265 ENSMUSG00000020486 ENSMUST00000084575,ENSMUST00000107962,ENSMUST00000107960,ENSMUST00000018544,ENSMUST00000096206 3 5 9 80 11 87397104 87397428 TGATTCCTCTGAGGATGAC 58 87397472 87397490 CCTTTCTTCACAGACTTCC 57 NA Nonspecific Mus musculus 50 Cacnb1 ENSMUSG00000020882 ENSMUST00000103144,ENSMUST00000092736,ENSMUST00000107561 3 3 5 109 11 97871680 97872664 TTAAGAAGACAGAGCACGT 58 97871210 97871228 TTTCTGCATCATGTCTGTC 57 NA Mus musculus 50 Gcn5l2 ENSMUSG00000020918 ENSMUST00000006973,ENSMUST00000103118 3 2 3 83 11 100572209 100572463 CATTGAACAGGGTGTACTG 58 100572144 100572163 GAGAGCTCAAACATTGTCTG 58 NA Mus musculus 50 Wars ENSMUSG00000021266 ENSMUST00000109848,ENSMUST00000078788 2 2 2 83 12 110119307 110119325 TAAACCGAATAGAGCGAGC 59 110113985 110119261 GATTCATATCTCGGTGGGAG 59 NA Mus musculus 50 Ocln ENSMUSG00000021638 ENSMUST00000069756,ENSMUST00000022140 2 2 2 80 13 101281412 101281432 CCACTATGAAACAGACTACAC 58 101276263 101281371 ATAGGTGGATATTCCCTGAC 57 NA Mus musculus 50 Ldb3 ENSMUSG00000021798 ENSMUST00000022330 2 1 5 138 14 35380655 35380673 AAGATGAGGCTGATGAGTG 59 35375056 35380049 TCAAACCTTTCCCTTGACC 59 NA Mus musculus 50 Anxa7 ENSMUSG00000021814 ENSMUST00000065504,ENSMUST00000100844 3 2 2 80 14 21277842 21277862 TCTACTATTCCATGAAAGGCG 59 21275814 21277801 CAAGGTCAATCTCACTTCGA 59 NA Mus musculus 50 1810015C04Rik ENSMUSG00000022270 ENSMUST00000022881 3 1 4 123 15 25819262 25819281 TGTATCACCTCATTTCCGTC 59 25824892 25893990 ATGACTTCCCAGCTTTCAG 59 NA Mus musculus 50 1700019P01Rik ENSMUSG00000022388 ENSMUST00000109371,ENSMUST00000023023 1 2 2 80 15 88763209 88763877 GAATTCTTGGATGACTTCCG 58 88763148 88763166 TTTGCTGCAGTAATTCTGG 58 NA Mus musculus 50 Zc3h7b ENSMUSG00000022390 ENSMUST00000109554 2 1 2 84 15 81623335 81623459 GACATCATGATGGGCTACC 59 81623507 81623525 TCTCAGACTGAATGTGCTG 59 NA Mus musculus 50 Adamts20 ENSMUSG00000022449 ENSMUST00000035342 1 1 2 97 15 94116228 94116748 GGCTAGATTGTTCAACATCG 58 94116150 94116169 GTCACAGAGACTTTCATTGG 58 NA Mus musculus 50 Trp63 ENSMUSG00000022510 ENSMUST00000115310,ENSMUST00000115306,ENSMUST00000040231 2 3 6 81 16 25886319 25886337 ATGCCTGGACTATTTCACG 59 25886382 25889108 CAGACTTGCCAAATCATCC 58 NA Mus musculus 50 Dlg1 ENSMUSG00000022770 ENSMUST00000115205,ENSMUST00000115197,ENSMUST00000115201,ENSMUST00000064477,ENSMUST00000100001 1 5 8 80 16 31743285 31743303 TCAGAGAAGAACCTGTCAG 58 31743347 31771851 TTCTGTGGGCTTTATTGGT 59 NA Mus musculus 50 Dlg1 ENSMUSG00000022770 ENSMUST00000115205,ENSMUST00000115197,ENSMUST00000115201,ENSMUST00000064477,ENSMUST00000100001 3 5 8 81 16 31743285 31743303 TCAGAGAAGAACCTGTCAG 58 31743348 31771852 CTTCTGTGGGCTTTATTGG 58 NA Mus musculus 50 Kng1 ENSMUSG00000022875 ENSMUST00000089902 3 1 3 102 16 23079113 23079674 GAAGGAAGAACTGACTCAG 57 23079740 23079758 GCTGTACATGGATATCAGG 57 NA Mus musculus 50 Il15ra ENSMUSG00000023206 ENSMUST00000114833 2 1 7 90 2 11640006 11640024 AACATCCACCCTGATTGAG 59 11640078 11645733 GGGAGAAATCTTGATGCAC 58 NA Mus musculus 50 Prph ENSMUSG00000023484 ENSMUST00000047104,ENSMUST00000024249 1 2 2 82 15 98886857 98887207 TACACGAAGAGGAACTTCG 59 98887253 98887271 CTTCACTGTTGCCTCTACC 59 NA Mus musculus 50 Synj2 ENSMUSG00000023805 ENSMUST00000080283,ENSMUST00000115789,ENSMUST00000115785 1 3 7 116 17 6035452 6035470 CAAGGGTCTTCTAAGCCAG 59 6035550 6037392 TAACATGGGCTTTCCTGTC 59 NA Nonspecific Mus musculus 50 Fgd2 ENSMUSG00000024013 ENSMUST00000024810 2 1 1 80 17 29504293 29504311 GCTGCTCAAGGAATATGTG 58 29504866 29504884 AAGATCATGTCCAGTGCTC 59 NA DesignNoJunction Mus musculus 50 Sncaip ENSMUSG00000024534 ENSMUST00000115410,ENSMUST00000025413 1 2 2 80 18 53031128 53044632 CCATCAAGAATGGTCAGCT 59 53044675 53044694 CCTTGGAACAACTCAATTCC 59 NA Mus musculus 50 Cd6 ENSMUSG00000024670 ENSMUST00000080292,ENSMUST00000025572,ENSMUST00000113053 3 3 4 83 19 10867424 10868639 CAAAGAAGCTCCTATGCTG 58 10867359 10867377 TCATAGTGCTCATAGTCGG 58 NA Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000111657,ENSMUST00000111658,ENSMUST00000111654,ENSMUST00000111652 3 4 15 115 19 55829570 55892272 CAGTATCTTCAGATGAAATGGC 59 55892347 55982923 ACTTTGTTCGAAACGATGTG 59 NA Mus musculus 50 Apex2 ENSMUSG00000025269 ENSMUST00000112721 2 1 6 93 X 147021651 147021669 GAGATGTACTGACAGAGCC 59 147020600 147021595 CAAGAGCATTCAGAATAGCC 58 NA Mus musculus 50 Sirt3 ENSMUSG00000025486 ENSMUST00000026559,ENSMUST00000106048 3 2 2 85 7 148055541 148062262 AGACATATGGGCTGATGTG 59 148055474 148055492 CAAAGAACACAATGTCGGG 59 NA Mus musculus 50 Cant1 ENSMUSG00000025575 ENSMUST00000017620,ENSMUST00000092378,ENSMUST00000106288,ENSMUST00000106287 1 4 5 83 11 118272223 118272241 TCATCTACCAGATCGAAGG 57 118270190 118272176 CTTTGAAACCCTTCTCCAC 58 NA Mus musculus 50 Arhgef9 ENSMUSG00000025656 ENSMUST00000113878 3 1 10 112 X 92326344 92360939 TGTATGACCTGATCACTGG 58 92326250 92326268 CAAGACTTTGATGACGTCG 58 NA InUTR Mus musculus 50 Taf3 ENSMUSG00000025782 ENSMUST00000114909,ENSMUST00000026888 3 2 4 163 2 9839830 9842690 AGCACTTATGTGATCCGTG 59 9838049 9838067 CACTGCATCTCTTCTGGAG 59 NA Mus musculus 50 Crygc ENSMUSG00000025952 ENSMUST00000114064,ENSMUST00000027089 3 2 2 107 1 65119787 65119805 AGAGTACCCTGACTACCAG 59 65118408 65118427 TCTTCTTTCTCATACAGCCG 59 NA DesignNoJunction Mus musculus 50 Sp100 ENSMUSG00000026222 ENSMUST00000066427,ENSMUST00000027424 1 2 4 111 1 87575665 87575683 GAGAAGAGACAGAGGAGGA 59 87588622 87590850 ACTTCTTGCTAGGAAAGCTG 59 NA Mus musculus 50 Pam ENSMUSG00000026335 ENSMUST00000058762 1 1 2 100 1 99760849 99760867 CTAGAGTCAACCTTGAGGC 59 99749797 99760785 TCCACATGGAAATCTCCTG 58 NA Mus musculus 50 Ppp2r5a ENSMUSG00000026626 ENSMUST00000067976,ENSMUST00000110885 1 2 2 91 1 193177843 193178418 CTGGAATCAGACTATTGTAGC 57 193177772 193177790 AGGAACTAGTAAGGTCGTC 57 NA Mus musculus 50 1700009P17Rik ENSMUSG00000026649 ENSMUST00000085955 2 1 2 82 1 173055175 173055193 CTTACTTACCCACGTACCT 57 173055412 173055432 ATCTGAGTGTAACCCATGG 58 NA Mus musculus 50 3110001A13Rik ENSMUSG00000026655 ENSMUST00000115055,ENSMUST00000115054,ENSMUST00000115053,ENSMUST00000027965,ENSMUST00000115052 1 5 5 88 2 3695765 3695783 GAAGGAGGAAGAAGCTCAG 59 3695835 3696785 TCTCAAGTTCAAGCTGCTC 59 NA Mus musculus 50 Camsap1 ENSMUSG00000026933 ENSMUST00000097831 3 1 5 120 2 25808328 25821191 ATCAATAAGGTCCGTTATCGG 59 25808228 25808246 AGTGAACCACTGCTAAGAG 58 NA Mus musculus 50 Dync1i2 ENSMUSG00000027012 ENSMUST00000112142,ENSMUST00000112140,ENSMUST00000112144,ENSMUST00000100028,ENSMUST00000112136 3 5 8 158 2 71066665 71066683 CCTATGTCTCCATCCTCCA 59 71071762 71073987 TTTAATAGGTCCTCGTCCCA 59 NA Mus musculus 50 Zfp289 ENSMUSG00000027255 ENSMUST00000028691,ENSMUST00000080008 3 2 2 109 2 91115230 91115248 TATGAAGCTAGGTCTCGGT 59 91115321 91115448 CCCAGAGATACAGTTCCTC 58 NA Mus musculus 50 4930402H24Rik ENSMUSG00000027309 ENSMUST00000044766,ENSMUST00000110248 2 2 6 80 2 130543074 130545584 TGTCACAAGGAATGAAGAC 57 130543012 130543030 AAGTATCGAGAACGTAGCA 58 NA Mus musculus 50 Gnas ENSMUSG00000027523 ENSMUST00000109096 2 1 14 154 2 174110969 174159721 ATGGATAAAGGTGCTGGAG 59 174167162 174167180 ATGTCCTGCACTTTAGTGG 59 NA InUTR Mus musculus 50 Src ENSMUSG00000027646 ENSMUST00000092576,ENSMUST00000109529 2 2 5 84 2 157284294 157284314 TCTATGACTATGAGTCACGGA 59 157284359 157284587 ACCTTCCTCGTGTTATTGAC 59 NA Mus musculus 50 Pex5l ENSMUSG00000027674 ENSMUST00000108226,ENSMUST00000108224,ENSMUST00000108225,ENSMUST00000078226,ENSMUST00000108221 3 5 5 88 3 32853309 32853329 CCAAAGTACAAGTACCTTGTG 58 32852115 32853259 AGAACAGAGCTGTCAACTG 59 NA Mus musculus 50 Ift80 ENSMUSG00000027778 ENSMUST00000107812,ENSMUST00000029347 1 2 2 80 3 68744051 68744070 TAAAGCATCCTTAAACCACG 58 68739826 68744010 GTATTCCAGTTCTTCGTAGAG 57 NA Mus musculus 50 Col11a1 ENSMUSG00000027966 ENSMUST00000029583,ENSMUST00000029586,ENSMUST00000029585 1 3 5 133 3 113797809 113797828 AGGACATTGACCACTAACTC 59 113797924 113798129 ACAATATTTGCCTGGACCC 59 NA Mus musculus 50 Tmem68 ENSMUSG00000028232 ENSMUST00000029891,ENSMUST00000108388 1 2 2 80 4 3496563 3496582 CTCATAACTTGTGGGATGGT 59 3491396 3496522 CTTCATAACCATGCCAAACAG 59 NA Mus musculus 50 Col15a1 ENSMUSG00000028339 ENSMUST00000102917,ENSMUST00000082303,ENSMUST00000107732,ENSMUST00000107731 3 4 6 117 4 47306100 47306119 GCTGTGGTTAACATCAAAGG 59 47308985 47311555 CTTTAACACCGTGGAAAGTG 59 NA Mus musculus 50 2310039E09Rik ENSMUSG00000028348 ENSMUST00000030033,ENSMUST00000107701 3 2 2 60 4 48676742 48676760 CTACGTTGTCAACAAGCTG 59 48676784 48676802 GACATCCTTAATGTGAGCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ptprd ENSMUSG00000028399 ENSMUST00000084471,ENSMUST00000107288 2 2 9 80 4 75627976 75627994 AGGGAAGTGAGACAATTCC 58 75627912 75627932 CGTAAGAAAGCTAGGAGGT 58 NA Mus musculus 50 Nfx1 ENSMUSG00000028423 ENSMUST00000091614 2 1 3 86 4 40956235 40956253 GTCATAGCGAGGAGAAGTG 59 40956300 40959109 GTTTCTTAATTGTGAGCTCCTC 59 NA Mus musculus 50 Ubap2 ENSMUSG00000028433 ENSMUST00000108068,ENSMUST00000030143,ENSMUST00000108066 2 3 4 80 4 41180736 41182557 TTAAGCAGCTTATGGAAGTG 57 41180675 41180694 TGTTCACATCACCATTACAG 57 NA Mus musculus 50 Tpm2 ENSMUSG00000028464 ENSMUST00000030184,ENSMUST00000107913 1 2 4 83 4 43528863 43531109 TCTGGAAGATGAAGTCTATGC 59 43528800 43528819 GAAGTGATGTCATTGAGTGC 59 NA Mus musculus 50 Tln1 ENSMUSG00000028465 ENSMUST00000030187,ENSMUST00000102947 2 2 3 80 4 43568777 43568796 GTGAAGACTATCATGGTGGA 58 43568616 43568734 GTTGGTGATACCAATTCGG 58 NA Mus musculus 50 Usp24 ENSMUSG00000028514 ENSMUST00000094933,ENSMUST00000106798 3 2 2 84 4 106015000 106019144 GAGGCATTTAAGAAGCTCCT 59 106019188 106019209 GCATCAACATGTTGTAGATTCC 59 NA Mus musculus 50 Usp1 ENSMUSG00000028560 ENSMUST00000030289,ENSMUST00000091358 1 2 2 87 4 98593352 98594930 AGAGGATCTGAGATTGACCA 59 98594977 98594998 CCACAAATGGTAACAAGTTCTC 59 NA Mus musculus 50 Trit1 ENSMUSG00000028653 ENSMUST00000102649 3 1 2 84 4 122729350 122729368 TCTGATGTTTCCAAGTGGG 59 122729416 122729742 CTGTAGGTTTGTGACCCTG 59 NA Mus musculus 50 Prdx1 ENSMUSG00000028691 ENSMUST00000030454,ENSMUST00000106470 3 2 2 97 4 116364525 116365496 ATCTGGCATGGATTAACAC 57 116365557 116365575 ATAATCCTGAGCAATGGTG 57 NA Nonspecific Mus musculus 50 Pomgnt1 ENSMUSG00000028700 ENSMUST00000106498,ENSMUST00000106496,ENSMUST00000079561,ENSMUST00000079267,ENSMUST00000106494 3 5 5 83 4 115824531 115824691 AAGACTATGATGAGGCCCT 59 115824738 115824756 ATACTTCCACATCCAGCAC 59 NA Mus musculus 50 Bai2 ENSMUSG00000028782 ENSMUST00000106017,ENSMUST00000106015,ENSMUST00000106012,ENSMUST00000030571,ENSMUST00000097868,ENSMUST00000106018 1 6 6 81 4 129698486 129698812 CTTGGACTTTGAGAAGGTG 57 129698857 129698875 GAAAGTGTGGAACTTCTGG 58 NA Mus musculus 50 Csf3r ENSMUSG00000028859 ENSMUST00000106162,ENSMUST00000030673 1 2 3 94 4 125709461 125709479 GTATATGGCCATCTGGGTG 59 125709536 125711425 GCTCCAATTTCACAACATCC 59 NA Mus musculus 50 Eya3 ENSMUSG00000028886 ENSMUST00000081726,ENSMUST00000105928,ENSMUST00000105927,ENSMUST00000105926,ENSMUST00000020197,ENSMUST00000079157 3 6 6 80 4 132256955 132256973 GCTCAGGTTTAACCATGGA 59 132257017 132260276 GGTCACACTCCTCTAAGTC 58 NA Mus musculus 50 Trspap1 ENSMUSG00000028898 ENSMUST00000030730,ENSMUST00000105962,ENSMUST00000105959,ENSMUST00000105960 1 4 5 90 4 131877714 131881130 GACAATAGCCCTGAGTACTC 59 131877643 131877664 GGTAGACTTTGACAAAGAACTC 58 NA Mus musculus 50 Mtf2 ENSMUSG00000029267 ENSMUST00000112623,ENSMUST00000112628,ENSMUST00000081567 3 3 4 81 5 108529995 108533049 GACTCAAGGGAAGTAAGCA 58 108533094 108533112 TTCTTGTATATGGGCCAGG 58 NA Mus musculus 50 Zc3hav1 ENSMUSG00000029826 ENSMUST00000114898 2 1 4 125 6 38282582 38282600 AGAAGAGTGTGGCTAAGAC 58 38281847 38282493 TGTAGCATAGGGAATCTGG 58 NA Mus musculus 50 Wbp1 ENSMUSG00000030035 ENSMUST00000032111,ENSMUST00000113936 2 2 2 126 6 83070032 83070191 TATGAACTCTGGTGGTTCTG 59 83069925 83069943 ACAAGTTGATTTCACGCTG 58 NA Mus musculus 50 Trpm1 ENSMUSG00000030523 ENSMUST00000107525,ENSMUST00000085222,ENSMUST00000098398,ENSMUST00000107516,ENSMUST00000107519,ENSMUST00000032737,ENSMUST00000107515,ENSMUST00000107522 1 8 10 80 7 71349466 71353166 GAAGATCAACACAAGGCTG 58 71353209 71353228 ACGATAGAAACCACGTTAGG 59 NA Mus musculus 50 Slc25a14 ENSMUSG00000031105 ENSMUST00000114936 3 1 4 127 X 45977371 45982434 GATTGTAAGCGGACATCAG 58 45984067 45984086 TAAGATCCACAGGGAAAGTG 59 NA Mus musculus 50 Srpx2 ENSMUSG00000031253 ENSMUST00000113303,ENSMUST00000113304,ENSMUST00000033606 3 3 3 80 X 130460515 130460788 ATGTGTAGACATAGATCCACC 58 130460830 130460848 CGAGCAGTTAGTTTCTCTG 57 NA Mus musculus 50 Nox1 ENSMUSG00000031257 ENSMUST00000033610,ENSMUST00000113273 1 2 3 104 X 130627348 130627553 GATAGCAACATTGCTGGTC 58 130627262 130627280 ATTGTCCCACATTGGTCTC 59 NA Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112408,ENSMUST00000112406,ENSMUST00000112403,ENSMUST00000112402,ENSMUST00000112401,ENSMUST00000078682,ENSMUST00000112400,ENSMUST00000112398 3 8 10 87 X 156896773 156896793 CATCTCTTGTCAGTCTCATCC 59 156899311 156903525 CTCTGGGATTTGACTCCTG 59 NA Mus musculus 50 Mtm1 ENSMUSG00000031337 ENSMUST00000033700,ENSMUST00000061970,ENSMUST00000025391,ENSMUST00000101502,ENSMUST00000114617 2 5 7 80 X 68554988 68555680 AGATGTCGAAACAGTTCCC 59 68555722 68555742 GACAGCTATACAGATGATCCA 58 NA Mus musculus 50 Zfp185 ENSMUSG00000031351 ENSMUST00000114546,ENSMUST00000114543 2 2 3 80 X 70242436 70242624 GGAAGTATTGGGAAAGGGAG 59 70242666 70242685 AGTCCGTACTTTCATCTGTC 59 NA Mus musculus 50 Bgn ENSMUSG00000031375 ENSMUST00000116585,ENSMUST00000033741 3 2 2 84 X 70737489 70738068 TGAACTGCATTGAGATGGG 59 70738116 70738134 AGGTAATTGAGCTTCAGGC 59 NA Mus musculus 50 Ard1 ENSMUSG00000031388 ENSMUST00000096316 3 1 6 200 X 71164878 71165103 GTCAGGAAGAGTAACAGGG 58 71163122 71163140 CCCAAGTACAGAATCTCCC 59 NA Mus musculus 50 L1cam ENSMUSG00000031391 ENSMUST00000114430,ENSMUST00000114433,ENSMUST00000066605,ENSMUST00000066576 1 4 7 100 X 71101482 71101500 AAGGGTGGCAAATACTCAG 59 71100597 71101107 TCATTGTCACTGTACTCGC 59 NA Mus musculus 50 Tsc22d3 ENSMUSG00000031431 ENSMUST00000112996,ENSMUST00000112995,ENSMUST00000055738 2 3 3 63 X 137076650 137076670 CTAGACAACAAGATTGAGCAG 58 137075610 137075628 CTCTCACAGCGTACATCAG 59 NA DesignNoJunction Mus musculus 50 Anxa10 ENSMUSG00000031635 ENSMUST00000034052 3 1 2 82 8 64553415 64555093 AAGCCTACTGTTTACAGTACAG 59 64553354 64553374 CATGAGAGTATCCCTGAAGTG 59 NA Mus musculus 50 Sh3rf1 ENSMUSG00000031642 ENSMUST00000093488,ENSMUST00000034060 3 2 3 104 8 63832550 63832568 ACTGGGTTAATTGTGACCC 59 63832636 63840393 ATTCATACTTCCAAGGGCA 58 NA Mus musculus 50 Ints10 ENSMUSG00000031864 ENSMUST00000110241,ENSMUST00000110242,ENSMUST00000034328,ENSMUST00000070713 3 4 4 81 8 71320654 71320672 AAATCAGCATCATCACGTC 58 71320716 71321673 AGGGTTTCAAATAAACTCCG 58 NA Mus musculus 50 1700128F08Rik ENSMUSG00000031998 ENSMUST00000034483 3 1 1 78 9 8225321 8225340 AAGAAGAGAATCCTTGCCTC 59 8241300 8241318 GATCAGAACTCAGCACTCC 59 NA DesignNoJunction Mus musculus 50 Dock6 ENSMUSG00000032198 ENSMUST00000034728,ENSMUST00000086329 3 2 3 81 9 21607488 21607507 TGGATGAACAAGAGTTTGTG 58 21607337 21607444 GTATAGAACTCCTCCAGCC 58 NA Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113685,ENSMUST00000050905,ENSMUST00000113684,ENSMUST00000030185 3 4 16 83 9 66877542 66878846 TGACTTAGAAGACGAGCTG 58 66877477 66877495 GTCATATCGTTGAGAGCGT 59 NA Mus musculus 50 Mobp ENSMUSG00000032517 ENSMUST00000093773,ENSMUST00000111627 2 2 5 88 9 120077050 120077068 AGTACAGCATCTGCAAGAG 59 120077118 120082278 CCTCCTCAATCTAGTCTTCTG 59 NA Mus musculus 50 Cpne4 ENSMUSG00000032564 ENSMUST00000077190 3 1 3 89 9 104828089 104828107 AATAACTTAAGCCCAGCCT 58 104828160 104909872 TATAGCTACCTTCAGCCTG 57 NA Mus musculus 50 Usp4 ENSMUSG00000032612 ENSMUST00000076375 1 1 2 106 9 108265002 108265020 AACACTATCCAGGATGCTG 59 108265220 108269100 CCAGATCCATTTGACTGCA 59 NA Mus musculus 50 Rasgrp2 ENSMUSG00000032946 ENSMUST00000113476,ENSMUST00000035716 1 2 5 80 19 6403499 6403517 CTGAAGGCTCTGTTAGACC 59 6403560 6404315 CCATTTGTAGGTAGGGACAC 59 NA Mus musculus 50 Gas7 ENSMUSG00000033066 ENSMUST00000108681,ENSMUST00000041611,ENSMUST00000108682,ENSMUST00000108680 1 4 4 113 11 67416708 67416727 CTATGTCAACACGACTACCA 59 67443182 67456792 TATCCATTCACTGTTGTAGGC 59 NA Mus musculus 50 Stk36 ENSMUSG00000033276 ENSMUST00000087183,ENSMUST00000042446,ENSMUST00000113699,ENSMUST00000113694,ENSMUST00000087186 2 5 5 130 1 74648761 74649715 AAATACAGTGCTCAGGTGG 59 74649809 74649827 AGCATATGCACAATGTTGG 58 NA Mus musculus 50 Myo6 ENSMUSG00000033577 ENSMUST00000113259,ENSMUST00000113268 2 2 6 98 9 80141353 80144461 ACTTCTAAGGAACAAATGGC 58 80146985 80147004 ATCATGTTTCTTGGTACCAG 57 NA Mus musculus 50 Cd300a ENSMUSG00000034652 ENSMUST00000045151 3 1 2 157 11 114754767 114754787 TTTACAGTGACCTATGAGAGC 59 114754906 114755999 GTCTCTAGTGTTGGTCCTG 59 NA Mus musculus 50 Sidt2 ENSMUSG00000034908 ENSMUST00000038488 1 1 2 143 9 45753865 45754843 TCCTACAGTTACCAGGACC 59 45753434 45753758 GAGGTATTGCTTGGTTCGA 59 NA Mus musculus 50 Mitf ENSMUSG00000035158 ENSMUST00000043637,ENSMUST00000101123 1 2 7 83 6 97891286 97943128 AAGTCCTTAAGGTGCAGAC 59 97943175 97943193 GGTACTGCTTTACCTGGTG 59 NA Mus musculus 50 Stab2 ENSMUSG00000035459 ENSMUST00000099391 1 1 3 94 10 86381603 86381768 TCAACAAGACTCTCATGGAG 59 86381528 86381546 GTCACATATGACAGAGGCC 59 NA Mus musculus 50 Tmem161b ENSMUSG00000035762 ENSMUST00000057495 1 1 2 82 13 84426337 84426355 TCTGGGTGAAACCAATCAC 59 84426400 84431999 TGTGGCTTCTGTCATTAGAG 59 NA Mus musculus 50 Exoc1 ENSMUSG00000036435 ENSMUST00000049469 2 1 3 167 5 76983222 76988038 AGAAGTTTGGTCTCCATGG 59 76988169 76988187 CAAACTTGGTTCTGTCAGC 59 NA Mus musculus 50 Spg20 ENSMUSG00000036580 ENSMUST00000107971 1 1 2 80 3 54925654 54925672 CTCCCAGAAGATGACAGAG 58 54925715 54930470 ACTTGAATCTTTGGTCTGGA 58 NA Mus musculus 50 Rbm42 ENSMUSG00000036733 ENSMUST00000042726,ENSMUST00000108143 1 2 2 88 7 31426228 31426335 AGATGAATGGGAAGTATGTGG 59 31426160 31426178 CTTCTTACGGACCACATCC 59 NA Nonspecific Mus musculus 50 Nxt1 ENSMUSG00000036992 ENSMUST00000109961 1 1 2 99 2 148500315 148500334 TTTAGGAAAGCAGACTTCAG 57 148501078 148501097 CTTGAAATCTACTGATGCCA 57 NA DesignNoJunction, InUTR Mus musculus 50 2410018C17Rik ENSMUSG00000037339 ENSMUST00000045329,ENSMUST00000065119,ENSMUST00000065162 3 3 4 63 5 33957282 33957300 GAACCAGAGTTTGGATGAC 58 33953121 33957255 CTTCTCAGCAGAATACGGG 59 NA DesignRelaxed Mus musculus 50 Dlg7 ENSMUSG00000037544 ENSMUST00000043296 2 1 2 108 14 48013981 48015437 ATTCTCAGTCCTGTCTTCTG 58 48013892 48013910 CTTCTGTCTCAGAAGGTCC 58 NA Mus musculus 50 Limch1 ENSMUSG00000037736 ENSMUST00000101164 3 1 2 80 5 67273140 67273159 TGCTGAATGCTATAAAGCCA 59 67273200 67344920 AGATGGTATTGTCCAATCCTG 59 NA Mus musculus 50 Dzip1l ENSMUSG00000037784 ENSMUST00000078367,ENSMUST00000112885,ENSMUST00000112886,ENSMUST00000112884 3 4 4 80 9 99566206 99566226 GGGTCAATATGTTCTTAAGGC 58 99566267 99568070 CATCTTCTGAAAGCTGAGAC 58 NA Mus musculus 50 D630003M21Rik ENSMUSG00000037813 ENSMUST00000103121,ENSMUST00000046944 2 2 2 80 2 158031528 158034160 CAGTTCTTCCAGAAACTGGA 59 158031467 158031485 AAACTCTTGGATGGAAGCC 59 NA Mus musculus 50 Sirpa ENSMUSG00000037902 ENSMUST00000103203,ENSMUST00000049262,ENSMUST00000103202 3 3 5 81 2 129434986 129441190 CTATGTACTCGCCAAACCT 59 129441235 129441253 GGTGAAGTTCACTTTCTGG 58 NA Mus musculus 50 C330043M08Rik ENSMUSG00000038022 ENSMUST00000053094 2 1 2 80 6 55258315 55259260 TACGTCTGACTGTTGATACC 58 55259303 55259321 TGATACAGAGCTCAAGAGG 58 NA Mus musculus 50 Kcna6 ENSMUSG00000038077 ENSMUST00000040751,ENSMUST00000112242 1 2 2 60 6 126688541 126688559 AACTACTTCTACCACCGAG 57 126688499 126688517 AAGTGACGTGGGTATACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sbf2 ENSMUSG00000038371 ENSMUST00000106698 1 1 3 96 7 117453723 117453741 AGAAATGGTTATCCCTGCC 59 117452983 117453002 AGTTATACACTCGCTGCTG 59 NA Mus musculus 50 AI481877 ENSMUSG00000038598 ENSMUST00000107547,ENSMUST00000107548 2 2 3 80 4 59073746 59073765 TCTTTGGAAGTACAGAGTGC 59 59072572 59073704 GTAACTCTTCTAGGTCCTGC 59 NA Mus musculus 50 Nfe2l1 ENSMUSG00000038615 ENSMUST00000081775,ENSMUST00000107658,ENSMUST00000107655,ENSMUST00000107659,ENSMUST00000048638,ENSMUST00000107657,ENSMUST00000107656 1 7 7 97 11 96682630 96682648 CTATCTCCTCTTCTGACGG 58 96681817 96682569 TTTACTTCCATAGCCTGCA 58 NA Mus musculus 50 Edg2 ENSMUSG00000038668 ENSMUST00000107575,ENSMUST00000107574,ENSMUST00000055018,ENSMUST00000107571,ENSMUST00000107570 2 5 6 82 4 58499399 58499417 ATAGTTCTGGACCCAGGAG 59 58450493 58499353 GACAATAAAGGCACCAAGC 59 NA Mus musculus 50 Runx2 ENSMUSG00000039153 ENSMUST00000077846 2 1 5 117 17 44776703 44776721 CCTATCTGAGCCAGATGAC 58 44741245 44776623 CCACAGAAACCTGAAATACG 58 NA Mus musculus 50 2010001E11Rik ENSMUSG00000039339 ENSMUST00000045526 2 1 1 60 10 39643557 39643575 TTTGGTGCTTCAATTGGTG 59 39641968 39641986 CCCAGAGATCCAAGATGAG 58 NA DesignNoJunction Mus musculus 50 2700019D07Rik ENSMUSG00000039531 ENSMUST00000065640,ENSMUST00000048222 3 2 3 110 10 33660039 33660058 ATAGAGAATTAGCTCACCGG 58 33655048 33659966 CTAAACCATATTGCCGCTG 58 NA Mus musculus 50 Timeless ENSMUSG00000039994 ENSMUST00000105242,ENSMUST00000105240 3 2 8 96 10 127687155 127687350 CCTTCTTGCATGAATGGAG 58 127687410 127687428 CATCTTCACTTTCGTCCTC 57 NA Mus musculus 50 Adam22 ENSMUSG00000040537 ENSMUST00000088746 3 1 13 138 5 8088058 8090152 CTGGATCACAGGTATTTAAACC 58 8082229 8082247 ACCCAGTTGATGAAGAAGG 59 NA Mus musculus 50 Mis12 ENSMUSG00000040599 ENSMUST00000048807 1 1 1 103 11 70838192 70838213 CAGCAAGAAATTGTCTTCAGAG 59 70838675 70838693 GTGTGAAGCCAAAGAACTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000066420,ENSMUST00000111367 3 2 17 193 2 91002348 91002369 TCCGACAGAGAATGTAAATACC 59 91001660 91002194 CAGTCAAGTCAACAGATGC 58 NA Mus musculus 50 4930579G18Rik ENSMUSG00000040840 ENSMUST00000038631 1 1 1 127 14 55272681 55272699 AGAGGTCTACTGGTACAGG 59 55272996 55273014 ACTTATCCACTTCCCTCCA 59 NA DesignNoJunction Mus musculus 50 Phf8 ENSMUSG00000041229 ENSMUST00000112666,ENSMUST00000112670,ENSMUST00000046950,ENSMUST00000046962,ENSMUST00000112668,ENSMUST00000112662 2 6 6 80 X 148002276 148004892 CAAAGAAAGAAGCTTTGCC 57 148004935 148004954 TAGCCAGATCTTTAATGAGC 57 NA Mus musculus 50 Stx3 ENSMUSG00000041488 ENSMUST00000069285,ENSMUST00000112965,ENSMUST00000112964 3 3 5 98 19 11857586 11857604 AGTTGAATGTCATGCACAC 58 11856161 11857525 TTATCAATTTCTTCCGAGCC 57 NA Mus musculus 50 Rnf10 ENSMUSG00000041740 ENSMUST00000112097,ENSMUST00000112093,ENSMUST00000100842,ENSMUST00000040555 3 4 4 80 5 115707178 115710141 GAAGACGAGATGAGGTAGC 59 115707116 115707135 TCAGGTTGATCTTCTTAGGG 58 NA Nonspecific Mus musculus 50 Tcf20 ENSMUSG00000041852 ENSMUST00000048966,ENSMUST00000109510 1 2 3 138 15 82682050 82682068 GAACTACCTCTTGACAGCA 58 82655742 82681948 AGTGGGAGCATTTCATCTC 59 NA Mus musculus 50 Mat2b ENSMUSG00000042032 ENSMUST00000101347,ENSMUST00000040167 3 2 3 82 11 40493690 40494172 AGCCACTTAAGACCTATTACTG 59 40493629 40493647 TCCAATTTGGAGCAATCGA 59 NA Mus musculus 50 Ehbp1 ENSMUSG00000042302 ENSMUST00000109563,ENSMUST00000093276 1 2 3 83 11 22051125 22051144 CCACTGTGAATACCAATCCA 59 22046695 22051081 TGATTGGTTCTTCTGAGTCAG 59 NA Mus musculus 50 Osbpl6 ENSMUSG00000042359 ENSMUST00000111929,ENSMUST00000077972,ENSMUST00000090784 3 3 5 97 2 76394026 76398247 AAATACAGCTCCAGGAAGG 58 76398308 76402849 GAAAGGAACTGTTGTAGCC 58 NA Mus musculus 50 Usp48 ENSMUSG00000043411 ENSMUST00000105840,ENSMUST00000105841,ENSMUST00000105839 3 3 10 82 4 137169703 137169722 GTACAAGTTCAATGACGAGG 58 137169766 137171636 AAGGTTCTGCTAGATCTTCC 58 NA Mus musculus 50 Tmem145 ENSMUSG00000043843 ENSMUST00000108409,ENSMUST00000058863 3 2 2 117 7 26096492 26099728 TGTTTCTGATCATGACCCG 59 26099809 26099827 TTATCTGCTGATTGGCTCC 59 NA Mus musculus 50 Gpr146 ENSMUSG00000044197 ENSMUST00000051293,ENSMUST00000100514 1 2 2 60 5 139869278 139869297 TACCGTTACATCAACAAAGC 58 139869320 139869338 AGTGCATCTTCTTCATCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cdkn2a ENSMUSG00000044303 ENSMUST00000030237,ENSMUST00000060501,ENSMUST00000107131 1 3 3 160 4 88922649 88922667 GACATCGTGCGATATTTGC 59 88920637 88920655 ATTTAGCTCTGCTCTTGGG 59 NA DesignNoJunction, InUTR Mus musculus 50 P2ry4 ENSMUSG00000044359 ENSMUST00000053373 3 1 1 61 X 97789827 97789845 GACTGGACTAAGGAAGCTG 59 97789594 97789615 TAGTGATGTGAATAGCAAGGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Klk12 ENSMUSG00000044430 ENSMUST00000107970,ENSMUST00000014063 3 2 2 72 7 51026443 51026462 TACTACAAACAAGCCATGGG 59 51027382 51027400 CTCATTGGAGACAGTGGAG 59 NA DesignNoJunction Mus musculus 50 Ubtd2 ENSMUSG00000044949 ENSMUST00000051053 2 1 1 100 11 32399443 32399461 AACATAACACTACCACACG 57 32416153 32416171 ATCATGTTGATTGGTGGTG 57 NA DesignNoJunction Mus musculus 50 Suv420h1 ENSMUSG00000045098 ENSMUST00000113973,ENSMUST00000113972,ENSMUST00000113974,ENSMUST00000052699,ENSMUST00000113977,ENSMUST00000005518 3 6 9 191 19 3807412 3814124 GACAATGCAACTTCTAATCG 57 3814278 3814296 GATCTTGGAGAGTAAAGGC 57 NA Mus musculus 50 Akr1e1 ENSMUSG00000045410 ENSMUST00000091848 3 1 2 81 13 4606688 4606706 GGGAATGGGAATCAGTGAG 59 4602032 4606643 GGTACACCACAGCTTACTG 59 NA Nonspecific Mus musculus 50 AI894139 ENSMUSG00000045466 ENSMUST00000101445,ENSMUST00000057305 2 2 2 90 6 47906092 47906110 AACCTGGAGAATCAGATGC 59 47906164 47907487 TAGTCACAGAAACCTTGGG 58 NA DesignRelaxed Mus musculus 50 Spred2 ENSMUSG00000045671 ENSMUST00000055258 2 1 3 189 11 19854741 19898139 TGTGACAGCTATATTGTGC 57 19898292 19901021 TCAGAACTTCCAGTTTGTC 57 NA Mus musculus 50 Pqlc3 ENSMUSG00000045679 ENSMUST00000054536,ENSMUST00000067572 1 2 2 80 12 17004626 17004647 TCGTTATCAGCATTACTATGGG 59 17004497 17004585 AGGAGGACAATGTCTTGTG 59 NA Mus musculus 50 Whdc1 ENSMUSG00000045795 ENSMUST00000063385 3 1 3 105 7 88736968 88736987 CGGCTAAGAGCATATAAGGA 58 88738602 88738916 AATTCTGATGAGTGGTACCTG 59 NA Mus musculus 50 Vps13a ENSMUSG00000046230 ENSMUST00000068156,ENSMUST00000099611,ENSMUST00000112873 2 3 3 80 19 16714599 16714706 CAAAGCCAATTAAAGGTGCT 59 16714538 16714556 TCACTGCTCCAACTAAACC 59 NA Mus musculus 50 Tshz2 ENSMUSG00000047907 ENSMUST00000099062,ENSMUST00000109159,ENSMUST00000109157,ENSMUST00000087966 2 4 4 60 2 169710156 169710175 GATACTTTGCAACAACTCAC 57 169710197 169710216 TAGTGACTTTGAGAAAGTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 4932418E24Rik ENSMUSG00000048038 ENSMUST00000114145 2 1 2 109 2 26137133 26137638 GGAATTAGGCTCTGACAGG 59 26137042 26137060 GTGTATGCTTGGAAACCTG 58 NA Mus musculus 50 4932414N04Rik ENSMUSG00000048204 ENSMUST00000055930 3 1 1 80 2 68577516 68577536 CGAACAGTATAAGGATCCCTG 59 68577575 68579436 CTGTCCTTAGACCTTAGTTGTC 59 NA Mus musculus 50 Osr1 ENSMUSG00000048387 ENSMUST00000057021 2 1 1 87 12 9586540 9586558 TTACACCTGTGACATCTGC 59 9587305 9587323 GAAAGGCTTCTCTTTGGAG 58 NA DesignNoJunction Mus musculus 50 Bdnf ENSMUSG00000048482 ENSMUST00000053317,ENSMUST00000111051,ENSMUST00000111049,ENSMUST00000111047,ENSMUST00000111046,ENSMUST00000111050,ENSMUST00000111052,ENSMUST00000111045,ENSMUST00000111044,ENSMUST00000111043,ENSMUST00000111042 2 11 11 60 2 109564057 109564076 CACAGTCCTAGAGAAAGTCC 59 109564099 109564117 GGTCTCGTAGAAATACTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Bdnf ENSMUSG00000048482 ENSMUST00000111044,ENSMUST00000111042 2 2 11 105 2 109549809 109563547 TGTCGTAAAGTTCCACCAG 59 109563615 109563634 GTTTACTTCTTTCATGGGCG 59 NA InUTR Mus musculus 50 Olfr453 ENSMUSG00000048504 ENSMUST00000053647 1 1 1 60 6 42694653 42694672 CTCCTGATGACTCCATTCTG 59 42694695 42694713 GGATGGTGGAGATGATCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001104591.1 ENSMUSG00000048701 ENSMUST00000063086 3 1 1 84 10 69644998 69650446 TATATCACCCGGTCTTTCG 58 69650493 69650512 GTAGTAGGACATTCCAGCTC 59 NA Mus musculus 50 4921525H12Rik ENSMUSG00000049565 ENSMUST00000062935 1 1 3 81 3 108578139 108578159 GACTTAAATCATGGTGGAGGA 59 108578201 108581152 TTGACCAAGAAGATGCAGAG 59 NA Mus musculus 50 A230107C01Rik ENSMUSG00000049676 ENSMUST00000047846 3 1 3 83 7 29980894 29980912 TCCACCATCAAATACATGG 57 29976750 29980849 GTGATCATCTTGTAGTTCCTC 57 NA Mus musculus 50 Eif5a2 ENSMUSG00000050192 ENSMUST00000060500 2 1 1 60 3 28681100 28681119 ATGTCAACTTCCAAGACTGG 59 28681653 28681671 TGTCAATTCCAACAAGGTG 58 NA DesignNoJunction Mus musculus 50 Sept6 ENSMUSG00000050379 ENSMUST00000115241,ENSMUST00000060474,ENSMUST00000053456,ENSMUST00000115239,ENSMUST00000115232 3 5 5 80 X 34466901 34470103 AACCATTCAGTTTGCAGGA 59 34466839 34466860 TCATCTCCTCTTCTTTCTTCTG 59 NA Nonspecific Mus musculus 50 Pnma5 ENSMUSG00000050424 ENSMUST00000051569 3 1 2 60 X 70281652 70281670 GTTCCTTCAGTCTTCTCAG 57 70281610 70281630 CTCTAAACGTAGCAAGTAGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 AI314180 ENSMUSG00000050812 ENSMUST00000102889,ENSMUST00000098054,ENSMUST00000107560,ENSMUST00000041849 1 4 6 80 4 58826950 58828145 GAGACAATCAACATGTGCC 59 58826888 58826906 TCTGATCAGCTCACATAGC 58 NA Mus musculus 50 Rnf133 ENSMUSG00000051956 ENSMUST00000115354 3 1 2 60 6 23599572 23599592 GGTAACATCAAAGGTATGGAG 58 23599532 23599551 TGACTGTAACATGAACTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Klrc2 ENSMUSG00000052736 ENSMUST00000095411,ENSMUST00000071920 1 2 3 89 6 129606497 129606839 TCAAACCAAAGATAGCAGAG 57 129606427 129606445 AAGTTGTACAGTTGTCTGC 57 NA Nonspecific Mus musculus 50 Yap1 ENSMUSG00000053110 ENSMUST00000086580 2 1 2 99 9 7938530 7952963 TATTTCGGCAGGAATTAGCT 59 7938450 7938468 AATTCCTGAGACATCCCAG 58 NA Mus musculus 50 Gon4l ENSMUSG00000054199 ENSMUST00000107498,ENSMUST00000081695 3 2 4 92 3 88672736 88672754 CGAGGATTTCCGTACTGAC 59 88673760 88679842 ACTACAGATTGCACAGTCTC 59 NA Mus musculus 50 Sfrs11 ENSMUSG00000055436 ENSMUST00000072875,ENSMUST00000069025 1 2 5 91 3 157675162 157675286 CAAAGACGTCAAACAGGTG 59 157675089 157675107 CTGTTGGTCTCTTCTCCTC 58 NA Mus musculus 50 Lair1 ENSMUSG00000055541 ENSMUST00000086401,ENSMUST00000108600,ENSMUST00000068865,ENSMUST00000108599,ENSMUST00000108598 2 5 6 90 7 3961893 3962076 TGACTCCAGACATAGTTGC 58 3961405 3961423 GTCACCTCTTGAAGGTCTC 59 NA Mus musculus 50 H2-T9 ENSMUSG00000056116 ENSMUST00000058801 1 1 3 215 17 36177454 36177472 ATGCCATGTGTACCATGAG 59 36175706 36175932 AGTAAAGACTCGCCAACTG 59 NA DesignRelaxed Mus musculus 50 Nanos3 ENSMUSG00000056155 ENSMUST00000070102 1 1 1 60 8 86700239 86700257 ATTCTGCAAACACAATGGC 59 86700197 86700215 CTCATCCTTCAGGACATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ide ENSMUSG00000056999 ENSMUST00000025747 1 1 2 80 19 37346707 37351012 TCTACCAGGAAATGTTGGC 59 37346645 37346663 AAGAATCCATTTCCCTGGC 59 NA Mus musculus 50 Pkn1 ENSMUSG00000057672 ENSMUST00000109817,ENSMUST00000109818 2 2 4 82 8 86201732 86201833 CAAGGTAAGGCATTTCAGC 59 86201668 86201686 CTAGGGATGAGTCTACGGA 59 NA Mus musculus 50 Cds2 ENSMUSG00000058793 ENSMUST00000103181,ENSMUST00000089461 2 2 3 98 2 132123090 132123378 GTATCTGACAGGATTCTGCA 59 132124215 132124233 ATAAGCAAGGTCACATGGG 59 NA Mus musculus 50 Kcnh7 ENSMUSG00000059742 ENSMUST00000075052 2 1 3 80 2 62625696 62625714 GGTTCCTGATTGACATGGT 59 62615726 62625654 TTAGTGTCGTTGTCTCATCAG 59 NA Mus musculus 50 Csn1s2b ENSMUSG00000061388 ENSMUST00000072539,ENSMUST00000113279 3 2 3 99 5 88242975 88242993 CAGAATATGGATGTGGCCT 59 88245680 88247977 TGTCAGATACCTTCATGGGA 59 NA Mus musculus 50 Dlgap4 ENSMUSG00000061689 ENSMUST00000000094,ENSMUST00000070782,ENSMUST00000109568,ENSMUST00000109567 1 4 6 81 2 156536990 156571581 GCTTCCAAGTTCATCATGC 59 156571626 156571644 GATGAACGGTTTCGATGTG 59 NA Mus musculus 50 Kalrn ENSMUSG00000061751 ENSMUST00000114973,ENSMUST00000076810,ENSMUST00000074924 2 3 13 82 16 33989968 33992955 ATCTCCTCCTGTGATTCTG 58 33989904 33989923 GCTATGCAGGTATAAATCCC 57 NA Mus musculus 50 Bbs5 ENSMUSG00000063145 ENSMUST00000112286 3 1 3 95 2 69495039 69501091 ATCTGCAAATTAGTGGAGGA 58 69501146 69501167 CTTTGTGAAGTGAGTTGATCTC 59 NA Mus musculus 50 Crb1 ENSMUSG00000063681 ENSMUST00000059825 1 1 3 80 1 141145643 141211157 GGATTCACAGGAATTCACTG 58 141145582 141145600 GTTCTCACAAGTACCACCA 59 NA Mus musculus 50 Slco1a5 ENSMUSG00000063975 ENSMUST00000081380,ENSMUST00000111825 2 2 3 90 6 142190654 142190674 CATTCAGTCATCAGGAAACTC 58 142190582 142190603 CGACATGATAAAGTACTGCA 57 NA Mus musculus 50 Fbln2 ENSMUSG00000064080 ENSMUST00000041544 1 1 2 81 6 91209696 91209714 TCTACTGTGTCAACCACAC 59 91209759 91213345 CACTCATTGATGTCCACAC 58 NA Mus musculus 50 Plcxd1 ENSMUSG00000064247 ENSMUST00000086687,ENSMUST00000112535 3 2 2 158 5 110529300 110529318 ATAAGAACGTGTTGACCGT 59 110530412 110530430 AGTATGTCATCGTGTCGTG 59 NA DesignNoJunction Mus musculus 50 NM_182714.1 ENSMUSG00000067192 ENSMUST00000087144 2 1 1 60 17 37230259 37230280 CCATCTTTAATTCGACTCTCCT 59 37230220 37230238 ACACAGCCAACTGAATCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 NM_182714.1 ENSMUSG00000067192 ENSMUST00000087144 3 1 1 60 17 37230168 37230186 TCATCCTTGTCTCTTACGG 58 37230126 37230145 GCTTCAGTGGAGTTTATCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fat1 ENSMUSG00000070047 ENSMUST00000093529 1 1 3 100 8 46127409 46127576 AGTGACTTATGTCAGCTTAGTC 59 46127637 46127655 GAGTCACACTGACAGACAG 59 NA Mus musculus 50 Top1 ENSMUSG00000070544 ENSMUST00000109468,ENSMUST00000017078 1 2 2 80 2 160531045 160538386 TTCACGAATCAAGGGTGAG 59 160538430 160538448 TTTCGGATCTTGTCCACAC 59 NA Mus musculus 50 Prr16 ENSMUSG00000073565 ENSMUST00000116639,ENSMUST00000097576 2 2 2 60 18 51277723 51277741 GTGGCCAAAGAACTTAAGG 58 51462285 51462303 GCTGTAGATCAGAGGTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000008953 ENSMUSG00000073763 ENSMUST00000097904 1 1 1 60 4 121656715 121656733 TTTGGCCAGTCTCTAAAGG 59 121656011 121656029 CCAGGACTTCTTTCTCCAC 59 NA DesignNoJunction Mus musculus 50 Tnfaip8l3 ENSMUSG00000074345 ENSMUST00000098760 1 1 1 60 9 53875093 53875112 TTTGATACGAATGTGCTCTC 57 53875052 53875070 CCAGTTCATGTACCAGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Serf2 ENSMUSG00000074884 ENSMUST00000102482,ENSMUST00000099475 1 2 3 218 2 121275742 121275760 GAACATGAAGAAGCAGAGC 58 121276579 121276597 GAAGAAACTCGAGCATGGT 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Nlrp12 ENSMUSG00000078817 ENSMUST00000108653,ENSMUST00000108652 3 2 2 81 7 3235316 3239841 TCCACATACTTACAGGAAAGG 59 3235255 3235273 GGTTGGAGTTGGTACAGAC 59 NA Mus musculus 50 0610010B08Rik ENSMUSG00000078880 ENSMUST00000108991,ENSMUST00000108990 3 2 3 95 2 176410284 176410305 GACCTATAAGAATCTCACAGCT 59 176408848 176410023 CTTTCATGCCTTCCATGAC 58 NA Nonspecific Mus musculus 50 0610010B08Rik ENSMUSG00000078880 ENSMUST00000108991 3 1 3 131 2 176407020 176408716 ACTTTAGAACATGCAGTGG 57 176406907 176406926 AAACCTCATGTTCCTTACAG 57 NA Nonspecific Mus musculus 50 Eif1a ENSMUSG00000079034 ENSMUST00000110152 1 1 1 60 12 88858501 88858519 AATTGAACTTTGGGCACAG 58 88858543 88858561 AAGGTCACAAATGGAATGG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 NP_997557.2 ENSMUSG00000079239 ENSMUST00000111579,ENSMUST00000111578 1 2 2 60 2 86434346 86434365 TTGATTTCTTCCCTTGTCGT 59 86434305 86434326 TGAGAACAGCTATGAGAATGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Q0ZNK3_MOUSE ENSMUSG00000079579 ENSMUST00000114682 1 1 1 60 X 61404904 61404925 GGAGAAGATAATCAGGAGAGTG 59 61404865 61404883 ATTCTTGTCCTTGTTCGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rbm35b ENSMUSG00000080204 ENSMUST00000116427,ENSMUST00000116426 3 2 2 81 8 108658558 108658576 GAATTCCATATGCAGCACC 58 108658218 108658513 TTTCTAGTCCCAAGTCCTG 58 NA Nonspecific Mus musculus 50 Sdhd ENSMUSG00000000171 ENSMUST00000000175 3 1 1 91 9 50406912 50406930 TACTTGAATCCCTGCTCTG 58 50405329 50405347 TAGTCGGTAACCACTTGTC 58 NA DesignNoJunction Mus musculus 50 Tspan32 ENSMUSG00000000244 ENSMUST00000009396,ENSMUST00000075172,ENSMUST00000082008,ENSMUST00000105922,ENSMUST00000105924 2 5 7 86 7 150200892 150200910 ACTTCGTGTATGATCAGGC 59 150200960 150201498 CACAACACAGAAACGTGTC 59 NA Mus musculus 50 Pxmp4 ENSMUSG00000000876 ENSMUST00000000896 3 1 2 135 2 154418004 154418022 ATAAGAGTCTCCATGCCCT 59 154413815 154417905 AGGTACATGTTGATCTGGC 59 NA Mus musculus 50 Lman2l ENSMUSG00000001143 ENSMUST00000001171,ENSMUST00000115008 1 2 2 83 1 36500385 36500403 TGATGACACAGTACATCCG 59 36496556 36500338 CTTTCAGGAAACATGGCAC 59 NA Nonspecific Mus musculus 50 Calm1 ENSMUSG00000001175 ENSMUST00000110082,ENSMUST00000001204 3 2 2 139 12 101443922 101444318 TTGACAAGGATGGGAATGG 59 101444421 101444439 ATAGTTGACTTGTCCGTCG 59 NA Mus musculus 50 Sgca ENSMUSG00000001508 ENSMUST00000103162,ENSMUST00000100551 1 2 2 142 11 94830755 94830773 GAGACTTCCTGACAGATGC 59 94824704 94830381 CATCTGGATGTCAGAGGTG 59 NA Mus musculus 50 Vsig2 ENSMUSG00000001943 ENSMUST00000011257 2 1 3 80 9 37348040 37348058 AGATTTCTACACCAACGGG 59 37350189 37350207 ATAAGAGTCCCAGCTACTC 57 NA DesignNoJunction Mus musculus 50 Unc119 ENSMUSG00000002058 ENSMUST00000108295 3 1 3 85 11 78161752 78161977 GAGGAGCTAATTCTGAAGTCC 59 78162024 78162042 ATCTCACTGACTGCAAGAG 58 NA Mus musculus 50 Armc6 ENSMUSG00000002343 ENSMUST00000019679 2 1 1 112 8 72748879 72748897 ATGATGATATCCGAGTGCC 58 72747575 72748803 GTTGTCAGAGAATGCTCTG 58 NA Mus musculus 50 Mrpl2 ENSMUSG00000002767 ENSMUST00000002844,ENSMUST00000113429,ENSMUST00000113430 2 3 3 117 17 46785315 46785426 ATGATCCTTGTAGGTCTGC 58 46785504 46785525 CCTATGTGATTAGAGTTCAGGA 58 NA Mus musculus 50 2510049I19Rik ENSMUSG00000003039 ENSMUST00000003123 2 1 1 144 8 74743853 74743871 AAAGACAAAGACAAGGCCA 59 74743979 74745842 GGATTCTTTCCATTTGCCG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ccdc65 ENSMUSG00000003354 ENSMUST00000003444,ENSMUST00000109145 3 2 3 119 15 98538958 98539495 GTTCTTGAAGGACAAGTTGG 58 98539577 98539595 ATGTCTTGGTGAAGCTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rab3b ENSMUSG00000003411 ENSMUST00000106651,ENSMUST00000106650 3 2 3 88 4 108563132 108596520 CAGATATGGGACACAGCTG 59 108596570 108596590 TCATACATGAGAATGAAGCCC 59 NA Mus musculus 50 Ascc3l1 ENSMUSG00000003660 ENSMUST00000103220,ENSMUST00000052695 2 2 2 80 2 127040632 127041795 CTCTGCTAATCTTGTAGCCTC 59 127041837 127041855 CAGAAGGCATCGATATCCC 59 NA Mus musculus 50 1700020C11Rik ENSMUSG00000004748 ENSMUST00000004868 1 1 1 124 11 3993884 3993902 CTTGGGTACTATGACCCAC 59 3992277 3992295 TAGAGTCCAGGAGGAAGTC 59 NA DesignNoJunction Mus musculus 50 Prl4a1 ENSMUSG00000005891 ENSMUST00000021779 2 1 1 122 13 28112152 28113249 AAGATCCAACTGGAAGTACTG 59 28113333 28113351 GGAGAGGATAGGAGGAGTG 59 NA Mus musculus 50 Cryba2 ENSMUSG00000006546 ENSMUST00000006721 3 1 1 119 1 74937161 74937179 TGATGACTACCCATCACTG 58 74936666 74936684 ACATACTGGTAACCTCGGT 59 NA DesignNoJunction Mus musculus 50 Slc4a3 ENSMUSG00000006576 ENSMUST00000027415,ENSMUST00000113545,ENSMUST00000006751 2 3 3 82 1 75551263 75551507 CTCTACAAGGTGTTCACAG 57 75551553 75551571 CTATTCAGTTCCAAGCCAG 57 NA Mus musculus 50 4933406E20Rik ENSMUSG00000006675 ENSMUST00000006853 3 1 1 124 9 108482158 108482355 GATGAAATGAGTCTGATTCAGG 58 108482055 108482073 TCAGGAAGGTAGTTGTACC 57 NA Mus musculus 50 2310044H10Rik ENSMUSG00000008140 ENSMUST00000008284 2 1 2 146 7 51747538 51747556 TCAATACATCTGTGCAGCT 58 51746331 51747334 TGTACATCCAGTATTTGGCA 59 NA Mus musculus 50 Nav1 ENSMUSG00000009418 ENSMUST00000112103 3 1 3 61 1 137504029 137504047 AGGAATTCCAGTTCGACAC 59 137503986 137504005 TTTCTCCATAACAGCTTGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnq1 ENSMUSG00000009545 ENSMUST00000009689,ENSMUST00000105918 3 2 2 80 7 150335427 150335445 CATCTTCAGTGTCCTGTCC 59 150335489 150368648 ACAAGGACAATCTCCATCC 58 NA Mus musculus 50 Rbm25 ENSMUSG00000010608 ENSMUST00000048155,ENSMUST00000010752 1 2 2 80 12 85009450 85012867 AGAGAAATGGCTAAGGAGG 58 85012910 85012929 GTAGTACTTCGGGTCATCTC 58 NA Mus musculus 50 Evi5l ENSMUSG00000011832 ENSMUST00000043710,ENSMUST00000086778 2 2 2 80 8 4191665 4193128 CATGTCCCAGTACTTCCAG 59 4193172 4193190 ACCTGATAAGCCTTGAGGA 59 NA Mus musculus 50 Fam18b ENSMUSG00000014177 ENSMUST00000014321 3 1 1 83 11 62697202 62697220 CTCAGTAGCAGCTTTATCG 57 62697266 62698589 ACCTGTGACATTCTTTACTG 57 NA Mus musculus 50 Ddx19a ENSMUSG00000015023 ENSMUST00000040416 1 1 1 82 8 113516961 113516979 GAAAGTCAAAGCAGACACC 58 113513501 113514386 CTCTGTCCTCTTTCTCCTC 58 NA Mus musculus 50 Aldh1a3 ENSMUSG00000015134 ENSMUST00000015278 1 1 1 83 7 73543630 73543648 GATCAACTGCTACAATGCA 58 73537639 73543584 TATTCTCCTAGTTCTCTGCC 57 NA Mus musculus 50 Slamf6 ENSMUSG00000015314 ENSMUST00000042184,ENSMUST00000015458 1 2 2 80 1 173864504 173864522 ATACACTGCGCAGATAACC 59 173864565 173866612 TTACCCAGTCGTTCAAAGAC 59 NA Mus musculus 50 Steap1 ENSMUSG00000015652 ENSMUST00000015796 1 1 1 81 5 5739841 5739859 GGCTGTGACATCTATTCCA 59 5736656 5739798 GACAATTCCTAGTTTGCTCTG 58 NA Mus musculus 50 Cacna1d ENSMUSG00000015968 ENSMUST00000112249,ENSMUST00000057695,ENSMUST00000112250 2 3 3 80 14 30984524 30984545 TTGTTAGTCTGATCATCCTTGG 59 30955887 30984485 TTTCCTTGGAGAATTCTCCAC 59 NA Mus musculus 50 Slc12a5 ENSMUSG00000017740 ENSMUST00000017884,ENSMUST00000099092,ENSMUST00000109311 2 3 3 128 2 164801947 164801967 TACATGATTTCCAGGTCTCTG 59 164802057 164804790 GAAGAGATAAGCCAGCAGG 59 NA Mus musculus 50 Mybl2 ENSMUSG00000017861 ENSMUST00000018005,ENSMUST00000109429 3 2 2 80 2 162900469 162900488 TTCCTGGACTCTTGTAACAG 58 162900531 162901380 GTTCAGAAACTGGGAAGGA 59 NA Mus musculus 50 Slc2a4 ENSMUSG00000018566 ENSMUST00000018710 3 1 1 89 11 69760131 69760149 TGGTCCTAGCTGTATTCTC 57 69759951 69760078 GTTCAATCACCTTCTGTGG 58 NA Mus musculus 50 Slc25a39 ENSMUSG00000018677 ENSMUST00000018821 3 1 2 166 11 102267132 102267529 TACACCAAATCATCCTCCG 59 102266371 102266389 CGCACAATCTTCACAAAGG 59 NA Mus musculus 50 Sfrp5 ENSMUSG00000018822 ENSMUST00000018966 3 1 1 94 19 42274336 42275987 CTCCAGTGACCAAGATCTG 59 42273511 42274279 CATCTTGACCACAAAGTCAC 59 NA Mus musculus 50 Atp6ap1 ENSMUSG00000019087 ENSMUST00000114168 2 1 3 81 X 71548862 71548880 GAAAGGCAATCTCCTTGTG 58 71548922 71549003 AAACCATACTGAGATTCTCTGG 59 NA Mus musculus 50 Styxl1 ENSMUSG00000019178 ENSMUST00000053906,ENSMUST00000111163,ENSMUST00000111164,ENSMUST00000111161 3 4 5 92 5 136244778 136246136 CTGTTTACTGGATGTCCGA 58 136241667 136241686 ATGAGGTACTGATGATCTCG 58 NA InUTR Mus musculus 50 Lyst ENSMUSG00000019726 ENSMUST00000110559,ENSMUST00000050664 3 2 2 80 13 13732455 13733344 CTGAGAAGAGTCATCCCTC 58 13733388 13733406 AACACTGAGAATCCTCAGC 59 NA Mus musculus 50 Ptprk ENSMUSG00000019889 ENSMUST00000020042 3 1 1 80 10 27925993 27926011 TACGATGACTTTGAGTGGG 58 27926054 27983317 CATATAGGAACCTTGAGGCA 58 NA Mus musculus 50 Ccar1 ENSMUSG00000020074 ENSMUST00000020268,ENSMUST00000105443 1 2 2 80 10 62248223 62248244 CCAGCAAACTATCAGTTAACAC 59 62246661 62248183 AGGTTGTGAATATTGCTGCT 59 NA Mus musculus 50 Plek ENSMUSG00000020120 ENSMUST00000102881,ENSMUST00000020321 2 2 2 98 11 16885532 16885550 CTACTATGATCCTGCTGGG 58 16881927 16883209 CTCTTCTTAACATCGTGACTG 58 NA Mus musculus 50 Nsg2 ENSMUSG00000020297 ENSMUST00000020537 1 1 3 97 11 31901876 31917664 AGAAGGTGATCGTGAAGAC 59 31917724 31955021 AATGGTGACCGTAAATTCAG 58 NA Mus musculus 50 Spnb2 ENSMUSG00000020315 ENSMUST00000006629,ENSMUST00000011877,ENSMUST00000102838,ENSMUST00000039018 3 4 5 147 11 30059406 30059425 AAGAAGACCTTCACCAAGTG 59 30054387 30059296 CCTTAGTGGGTTTAGGCAG 59 NA Mus musculus 50 Slu7 ENSMUSG00000020409 ENSMUST00000020681 2 1 1 80 11 43258264 43258284 GGATACAAATGTTGTCACTCG 59 43258326 43258697 CTCCTCTGAGTTAACGCTC 59 NA Mus musculus 50 Dld ENSMUSG00000020664 ENSMUST00000110857,ENSMUST00000002980 2 2 2 80 12 32017290 32018306 CACATATTCTAGGACCAGGTG 59 32017230 32017248 TATCTTCACAGGAAGCACC 58 NA Mus musculus 50 Map3k3 ENSMUSG00000020700 ENSMUST00000002044 2 1 1 85 11 106010980 106011595 AACCAAATCTCCTAGTGCTC 59 106011642 106011661 CATAGCACAAGTAGACCCTG 59 NA Mus musculus 50 Aurkb ENSMUSG00000020897 ENSMUST00000108666 3 1 2 140 11 68859503 68861297 CAAAGACGTCTCAGTCTGG 59 68861485 68861503 TGTTCTCAGCCAACTTCTG 59 NA Mus musculus 50 Myh3 ENSMUSG00000020908 ENSMUST00000108689,ENSMUST00000007301 2 2 2 80 11 66914685 66914849 CACATATCAGAGTGAGGAGG 58 66914891 66914910 GACTTGACTTTCACTTGGAG 58 NA Mus musculus 50 Akr1c18 ENSMUSG00000021214 ENSMUST00000021635,ENSMUST00000110704 2 2 2 80 13 4141414 4141434 GTAGACAACTGGAGATGATCC 59 4136471 4141375 GATAAAGATGGCATTCTACCTG 58 NA Mus musculus 50 Vsx2 ENSMUSG00000021239 ENSMUST00000021665 3 1 1 90 12 85912525 85912543 GAAGATGTTTCCTCCAGTG 57 85912597 85917239 TAAAGATTGTCCTGTGTCG 57 NA Mus musculus 50 Rnf19a ENSMUSG00000022280 ENSMUST00000022890 1 1 1 92 15 36173980 36175183 ACTGTTTCAACAGGTTGGA 59 36173906 36173924 TAACTGTTCCCAAGCTCAC 59 NA Mus musculus 50 Rnf19a ENSMUSG00000022280 ENSMUST00000022890 2 1 1 93 15 36173980 36175184 AACTGTTTCAACAGGTTGGA 59 36173906 36173924 TAACTGTTCCCAAGCTCAC 59 NA Mus musculus 50 Chkb ENSMUSG00000022617 ENSMUST00000023289 1 1 1 80 15 89257317 89257767 TAGAGATCAGTCGGTACTCC 59 89257256 89257275 CTATAGTGGACATCGAAGCC 59 NA Mus musculus 50 Qtrtd1 ENSMUSG00000022704 ENSMUST00000023387 2 1 1 83 16 43878141 43880424 GGAAGCTTTATAGGCATGC 58 43878076 43878094 TGTTACATAACCAGCTGGG 59 NA Mus musculus 50 Bambi ENSMUSG00000024232 ENSMUST00000025075 1 1 1 77 18 3511484 3511502 CATGTGCAATTATCGAGGA 57 3511980 3511998 TGATACCGGTTTCCTTGTC 59 NA DesignNoJunction Mus musculus 50 H2-Oa ENSMUSG00000024334 ENSMUST00000025192 1 1 1 116 17 34231661 34231679 TAGAGACCCTGATCTGTGG 59 34231759 34231961 AGAAGAGAAGTTACCTGCG 59 NA InUTR Mus musculus 50 Proc ENSMUSG00000024386 ENSMUST00000025245 3 1 1 178 18 32287077 32287095 AAGGATAGTCAACGGAACG 59 32283459 32284756 GATCATACTCACCAAGCCTC 59 NA Mus musculus 50 Tnks2 ENSMUSG00000024811 ENSMUST00000025729 2 1 1 80 19 36956217 36956235 TGGAATCAATGCCTATGGA 58 36956278 36958565 GGATTAAGACCTTGTTGTCC 58 NA Mus musculus 50 Pola2 ENSMUSG00000024833 ENSMUST00000025752 1 1 1 80 19 5946539 5947717 ATGAACAGGTGGAGAACTG 59 5946477 5946498 TTCCTTCGATAACTGTTCTCAG 59 NA Mus musculus 50 Apba1 ENSMUSG00000024897 ENSMUST00000025830 1 1 1 80 19 24018612 24019386 AATGGAATTATCTGCAGCCT 59 24019428 24019447 GATTTCGATGATCCGATGTC 58 NA Mus musculus 50 Vegfb ENSMUSG00000024962 ENSMUST00000025914 2 1 1 117 19 7060868 7060886 TCAAACAACTAGTGCCCAG 59 7060574 7060788 ATCATGAGGATCTGCATTCG 59 NA Mus musculus 50 Rps24 ENSMUSG00000025290 ENSMUST00000112384,ENSMUST00000112382,ENSMUST00000074521 1 3 3 106 14 25311030 25311140 AACAGATGGTCATTGATGTC 57 25311209 25311227 AAAGATGACATCTGGTGTG 57 NA Nonspecific Mus musculus 50 F430201B04Rik ENSMUSG00000025727 ENSMUST00000088234 1 1 2 129 17 26083641 26083659 CTGTCATTCCTGGTAGTGG 59 26083527 26083548 GAGGAACCCATACTTGGTG 59 NA Mus musculus 50 Pramel7 ENSMUSG00000025839 ENSMUST00000026957 2 1 1 143 2 87330234 87330994 AAAGAGTTGCTCAGGTGTC 59 87330109 87330128 TAAAGTGACACCTCTCAAGC 59 NA Mus musculus 50 Creb1 ENSMUSG00000025958 ENSMUST00000027099 1 1 4 66 1 64597522 64597540 CACAGATTGCCACATTAGC 59 64602692 64602710 ATAAATGTGGTGCAAGGAC 57 NA DesignNoJunction Mus musculus 50 Chrnd ENSMUSG00000026251 ENSMUST00000073252,ENSMUST00000086943 3 2 2 84 1 89092299 89092318 TGATCTGTGTCATCGTACTG 59 89092364 89093868 TCCAGGAAGAACTTCTTGAC 59 NA Mus musculus 50 Epb4.1l5 ENSMUSG00000026383 ENSMUST00000052404,ENSMUST00000027632 2 2 2 80 1 121518514 121518534 ACCCTATTGTCTTCATCTTCG 59 121517288 121518474 AATAAATACCGGGTTAGCTCC 59 NA Mus musculus 50 Pfkfb2 ENSMUSG00000026409 ENSMUST00000066863 2 1 1 88 1 132596611 132596629 GCAACATCCTCGTTATCTC 57 132595811 132596561 CAAGTATGGTAACTCATCTGC 58 NA Mus musculus 50 Abl2 ENSMUSG00000026596 ENSMUST00000027888 2 1 1 80 1 158563321 158563339 TTACTTTACATGGCCACCC 59 158563383 158563896 GGCAGCAAGATCTCTATGG 59 NA Mus musculus 50 2310028N02Rik ENSMUSG00000026627 ENSMUST00000027940 1 1 1 81 1 193172343 193173575 AAGGTCCAGGACATAATCAC 59 193173619 193173637 CTGCTTTAAACAACGCCAG 59 NA Mus musculus 50 Zbtb43 ENSMUSG00000026788 ENSMUST00000113156 2 1 3 83 2 33317839 33317858 TATTCATCCCAGATAGGGCA 59 33310633 33317794 CTTGTTTAGTGTGGTTCGAC 59 NA InUTR Mus musculus 50 Ttf1 ENSMUSG00000026803 ENSMUST00000100237,ENSMUST00000080198,ENSMUST00000061157 1 3 3 82 2 28930263 28930281 CATATCTTGGGTGGAGGTG 59 28930326 28934925 TGGTAAGAATCTCTGTCCAC 58 NA Mus musculus 50 Caprin1 ENSMUSG00000027184 ENSMUST00000028607,ENSMUST00000111147,ENSMUST00000111146 3 3 3 80 2 103612876 103612894 GGGACAAGTAAACCTTTGC 58 103611993 103612833 CATATTGAACACCGTTTGCA 59 NA Mus musculus 50 1700037H04Rik ENSMUSG00000027327 ENSMUST00000089512 3 1 3 60 2 130977379 130977397 TGGTCATGGTTACTCAGGA 59 130975262 130977355 TTGGAGTACATGAGACCCT 59 NA DesignNoJunction Mus musculus 50 Fbln7 ENSMUSG00000027386 ENSMUST00000110324,ENSMUST00000028864 3 2 2 113 2 128720628 128720958 AGACATCTCCCTTTCAGTG 58 128721035 128721053 TCTTCAACTTGGAAGGGAG 58 NA Mus musculus 50 Nkx2-2 ENSMUSG00000027434 ENSMUST00000109969 1 1 3 171 2 147011554 147011572 TAAGAGCCCTTTCTACGAC 58 147010199 147010217 GGTCTCCTTGTCATTGTCC 59 NA DesignNoJunction Mus musculus 50 Tpx2 ENSMUSG00000027469 ENSMUST00000109816,ENSMUST00000028969 2 2 2 95 2 152698866 152698884 TCAGAAACAGTCTATCCCA 57 152698942 152701285 ATAGATCTTCTCTGAGGCTG 57 NA Mus musculus 50 2610304G08Rik ENSMUSG00000027651 ENSMUST00000109517,ENSMUST00000109519,ENSMUST00000029180,ENSMUST00000103123,ENSMUST00000099135,ENSMUST00000109518 1 6 6 81 2 157873698 157873716 AGAGGAGGAAGATGATGAC 57 157873759 157875837 GATTAACTCCTCAGTCAAGAG 57 NA Mus musculus 50 Lrrc34 ENSMUSG00000027702 ENSMUST00000029252 2 1 1 81 3 30541737 30542219 CGAAACTACTTCAGAAACAACC 59 30541677 30541696 ATCAATTCTCCACCTTCAGG 59 NA Mus musculus 50 Exosc8 ENSMUSG00000027752 ENSMUST00000029316 2 1 1 80 3 54537580 54537598 CATTTGTGGCGTTAAAGCA 59 54536124 54536624 AGATCCACATTAGGGACGA 59 NA Mus musculus 50 Syt6 ENSMUSG00000027849 ENSMUST00000098785,ENSMUST00000090697 3 2 2 92 3 103391636 103391654 GGTCATCCTGGACAATCTC 59 103391709 103424719 TCCACACTTTCACTAGTAGC 59 NA Mus musculus 50 Tdo2 ENSMUSG00000028011 ENSMUST00000029645 3 1 1 93 3 81778329 81779259 GCAATTACTTGCAGTTGGA 58 81778254 81778272 ATGATGAATAGGTGCTCGT 58 NA Mus musculus 50 Dnajb4 ENSMUSG00000028035 ENSMUST00000029669 2 1 2 61 3 151849936 151856347 GAAGAAGGCTTGAAGGGAG 59 151849893 151849911 GTGTACCTGAAGGTACCTC 58 NA DesignNoJunction Mus musculus 50 Gba ENSMUSG00000028048 ENSMUST00000077367 3 1 1 82 3 89011902 89012245 CACTTCAGCAAGTTCATTCC 59 89012289 89012308 AGTGCTACTGTTTCCAAGTC 59 NA Mus musculus 50 Zfp364 ENSMUSG00000028098 ENSMUST00000029740 1 1 1 85 3 96588980 96589863 GTAACCCAGCTTCTAGGAC 59 96589912 96589930 ACTGTAACTGTTGGGAGAG 58 NA Mus musculus 50 Bag1 ENSMUSG00000028416 ENSMUST00000108089,ENSMUST00000030125 3 2 2 83 4 40883699 40884172 AGGTTCAGGTGTTCTTAGC 59 40883634 40883652 CCAAGTTTGTAGACTGCAG 58 NA Mus musculus 50 5430416O09Rik ENSMUSG00000028475 ENSMUST00000030197 3 1 1 60 4 43744116 43744134 CCCTTCAATAAGCAGTGTC 58 43744157 43744176 GTAGAAGGATACGGATGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Usp24 ENSMUSG00000028514 ENSMUST00000094933,ENSMUST00000106798 2 2 2 83 4 106013913 106013931 GGTCTATCCCGTACAAGAG 58 106013977 106014958 ACTCTGAAAGACCAAGTCTG 59 NA Mus musculus 50 Podn ENSMUSG00000028600 ENSMUST00000044248,ENSMUST00000106709,ENSMUST00000084370,ENSMUST00000106708 2 4 4 86 4 107695145 107695163 ATCCTAATCCTGTCCAGCA 59 107694775 107695097 CTTATTGTTCTTGAGGTGCAG 59 NA Mus musculus 50 Kif17 ENSMUSG00000028758 ENSMUST00000105818,ENSMUST00000030539,ENSMUST00000105821,ENSMUST00000105819 2 4 5 81 4 137849817 137849835 GCTGGGATGAGGATAATGG 59 137849880 137852122 GTCCCAGTTGGAACTACTG 59 NA Mus musculus 50 Arhgef16 ENSMUSG00000029032 ENSMUST00000030898 2 1 1 84 4 153661194 153662091 GCTCTTTCAAAGATGACCC 58 153661128 153661147 AGAATGTCATCATCGGACTC 59 NA Mus musculus 50 Pank4 ENSMUSG00000029056 ENSMUST00000070953,ENSMUST00000030931,ENSMUST00000105632 1 3 3 96 4 154350695 154350713 TTATGGGACACTGACTGTG 58 154350773 154351323 TTTCTGCTTCACCTTGGAG 59 NA Mus musculus 50 4933428G09Rik ENSMUSG00000029089 ENSMUST00000030968 1 1 1 80 5 48768389 48770572 AATTACGTTAGCTGAGGGTC 59 48770615 48770633 AGAAGCAACTCCCTAAAGC 59 NA Mus musculus 50 Whsc2 ENSMUSG00000029111 ENSMUST00000030993 1 1 1 80 5 34244287 34244305 TGCTGGATATTTCTGAGCT 58 34243917 34244244 CCACTTCTGTGTCTAAAGTC 57 NA Mus musculus 50 Eif2b4 ENSMUSG00000029145 ENSMUST00000077693,ENSMUST00000114603 1 2 2 80 5 31493007 31493026 TCAGGATTACACAACACCTC 59 31492826 31492964 GTCAGGAAGCTGATGTAGG 59 NA Nonspecific Mus musculus 50 Dpysl5 ENSMUSG00000029168 ENSMUST00000114729,ENSMUST00000088081 3 2 3 81 5 31085632 31086690 CTAAGATGCAAGGGAAGGT 58 31086735 31086753 TCCTGATGGTAGTAGTGCA 59 NA Mus musculus 50 Smr1 ENSMUSG00000029280 ENSMUST00000031211,ENSMUST00000031210 1 2 2 63 5 88433791 88437055 TTGTAGGATGCTTCCTGTC 58 88437082 88437100 GGTCCTCTAGGATCATGTC 58 NA DesignNoJunction Mus musculus 50 Rufy3 ENSMUSG00000029291 ENSMUST00000101048,ENSMUST00000113238,ENSMUST00000087029,ENSMUST00000031229 2 4 4 80 5 89064293 89066229 TAAGATTGGATGTCGAGAAGG 59 89066271 89066289 TCTCCAGCATCTTCATAGC 58 NA Mus musculus 50 Spp1 ENSMUSG00000029304 ENSMUST00000086833,ENSMUST00000031243,ENSMUST00000112748,ENSMUST00000112747 3 4 4 123 5 104868458 104868476 ACTTTCACTCCAATCGTCC 59 104868563 104869263 CTGTGGCATCAGGATACTG 59 NA Mus musculus 50 Nos1 ENSMUSG00000029361 ENSMUST00000111939,ENSMUST00000086451,ENSMUST00000111935,ENSMUST00000102557 2 4 4 87 5 118329406 118343839 CAGAGAACGAACAGTCTCC 59 118343890 118343908 TTGACCTTAAGGAAGCGAG 59 NA Mus musculus 50 Acads ENSMUSG00000029545 ENSMUST00000031524 2 1 1 85 5 115562307 115562325 AAGCTTGGATCACCAACTC 59 115562028 115562258 ACTGATACCCTTGTTCTGC 59 NA Mus musculus 50 Uncx ENSMUSG00000029546 ENSMUST00000031523 3 1 1 229 5 140020504 140020522 TTCAATGAGAGCCACTACC 58 140022728 140022746 ATCTTCTCCAGTTCCTTGC 59 NA DesignNoJunction Mus musculus 50 Spdyb ENSMUSG00000029586 ENSMUST00000031574 2 1 1 82 5 143954028 143956529 TTCTTCAGTCAACCAAGGG 59 143956575 143956593 GAATCTGATGACTCGTCCC 59 NA Mus musculus 50 Ocm ENSMUSG00000029618 ENSMUST00000031622,ENSMUST00000085704 1 2 2 81 5 144784795 144785310 GAAGATGAGCTCAAGTATTTCC 58 144784735 144784753 CCATCAAGGACTTGGTCTC 59 NA Mus musculus 50 Tfpi2 ENSMUSG00000029664 ENSMUST00000031674 1 1 1 96 6 3917932 3917950 ATTCAACTATGGAGGCTGC 59 3915526 3917872 AACTGGAGGAACTTTCTCG 59 NA Mus musculus 50 Tspan12 ENSMUSG00000029669 ENSMUST00000031678,ENSMUST00000090596 1 2 2 80 6 21785434 21785452 TTATCATCGTGGGAATGCT 58 21756298 21785390 GTAACGTTCCGAAGTACCA 59 NA Mus musculus 50 Mrpl19 ENSMUSG00000030045 ENSMUST00000032124 3 1 1 82 6 81913979 81913997 ATTTGCATCAAGCGATCAG 58 81912479 81913933 CAAATCTCCACACCTTGTC 58 NA Mus musculus 50 Bcl2l14 ENSMUSG00000030200 ENSMUST00000032321,ENSMUST00000111960 1 2 2 113 6 134374073 134377325 GAGTGAAGTTGTGGATTCCA 59 134377401 134377419 TCTTTGAGCTTGCTTCCTC 59 NA Mus musculus 50 Ttll3 ENSMUSG00000030276 ENSMUST00000032414,ENSMUST00000067255 3 2 3 81 6 113359322 113362788 CATCTATAAGCAGCCTGCT 59 113362833 113362851 GGGCTTCTTGATGGTAGAG 59 NA Mus musculus 50 Pde3b ENSMUSG00000030671 ENSMUST00000032909 1 1 1 80 7 121559957 121559976 CTTGTATTTCCCGAGAACAG 58 121634994 121638009 CTCCAGAATTCTGGTAATGAG 57 NA Mus musculus 50 Itgal ENSMUSG00000030830 ENSMUST00000106306,ENSMUST00000098028 1 2 2 80 7 134473683 134473701 TTCACGTGTACGTACTCAG 59 134473745 134476975 AGAAGCCAACCTTGTAGAG 58 NA Mus musculus 50 Tacc2 ENSMUSG00000030852 ENSMUST00000084513,ENSMUST00000033140,ENSMUST00000059145,ENSMUST00000033141,ENSMUST00000098004 2 5 5 149 7 137903136 137903154 CCGAAGAGAAACTGGACAG 59 137903538 137907777 TCTCTTTATTCTTCTGCTCCAG 59 NA Mus musculus 50 D7Ertd443e ENSMUSG00000030994 ENSMUST00000094002,ENSMUST00000106129 1 2 2 81 7 141489849 141489867 CTTTACAAACTGGGTGTGC 59 141486814 141489804 CAGCACGTGTAATCTTTGG 59 NA Mus musculus 50 Dcx ENSMUSG00000031285 ENSMUST00000033642,ENSMUST00000112856,ENSMUST00000112851,ENSMUST00000087313 1 4 4 103 X 140311857 140311876 TCTCCATGATTTCTTTGGTG 57 140310427 140311792 CTCTGCATTCATTCTCATCC 58 NA Mus musculus 50 Triml1 ENSMUSG00000031651 ENSMUST00000059692 1 1 1 81 8 44224144 44226008 ATGTTGTGTAAGGAGGAGAC 59 44224082 44224100 CTTCCTTGAGGAACTGGTG 59 NA Mus musculus 50 Smad1 ENSMUSG00000031681 ENSMUST00000066091,ENSMUST00000109885,ENSMUST00000066081 1 3 3 69 8 81895687 81895705 CTATAAGCGAGTGGAGAGC 59 81880322 81880340 CTGAGGATTGTACTCGCTG 59 NA DesignNoJunction Mus musculus 50 Gtl3 ENSMUSG00000031796 ENSMUST00000034249 1 1 1 84 8 97946790 97948530 GGGACAAATGTCAGTACCA 59 97946724 97946742 TCATGACAAGGAAAGGCAG 59 NA Mus musculus 50 Mthfsd ENSMUSG00000031816 ENSMUST00000116415,ENSMUST00000116414 2 2 3 231 8 123621819 123622620 GATATGTGACCTGGACTCAG 59 123621607 123621625 AGATAAGAAGGCAAGGGTG 58 NA DesignRelaxed, InUTR Mus musculus 50 Comp ENSMUSG00000031849 ENSMUST00000003659 1 1 1 80 8 72901091 72901111 CGATCAGAAAGATACAGACCT 59 72901152 72902528 GCTACATTTCGTATTCGGTC 58 NA Mus musculus 50 Apoa5 ENSMUSG00000032079 ENSMUST00000034584 1 1 1 248 9 46077402 46077862 CACAGGAGAACCTGAAAGG 59 46078074 46078092 TGTAGGGTTTCAACTGCTG 59 NA DesignNoJunction Mus musculus 50 Ddx25 ENSMUSG00000032101 ENSMUST00000034612 1 1 1 80 9 35364483 35364982 GATGAAGACGATGTAGTGGA 58 35364422 35364442 GTGGCTGGATTCTATTAAGGA 59 NA Mus musculus 50 Lipc ENSMUSG00000032207 ENSMUST00000034731 3 1 1 156 9 70650009 70650027 TCCTGCTCAAGTTCAAGTG 59 70646207 70649889 AATGTCATTCTTTGCTGCG 59 NA Mus musculus 50 Anxa2 ENSMUSG00000032231 ENSMUST00000034756 1 1 1 81 9 69330807 69330826 CATTGAGATCATCTGCTCAC 58 69330867 69331603 CAGATCAGTCTTGTACATTTCC 58 NA Mus musculus 50 Drd2 ENSMUSG00000032259 ENSMUST00000075764,ENSMUST00000114494 1 2 2 92 9 49208907 49208925 GTTACTGTCATGATCGCCA 59 49208981 49210183 ACACTCATTCTGGTCTGTG 59 NA Mus musculus 50 Ooep ENSMUSG00000032346 ENSMUST00000034900 3 1 1 174 9 78225922 78225940 AAATAGAGTGGATGTGCCA 58 78225483 78225784 TCTTTCACCTTCACAGCTC 59 NA Mus musculus 50 Rasgrf1 ENSMUSG00000032356 ENSMUST00000034912 1 1 2 80 9 89916201 89916221 ATCTCCCATATTATCCGAGAG 58 89916262 89921520 GTACTGAATTACCTTTGGCT 57 NA Mus musculus 50 Ptgs2 ENSMUSG00000032487 ENSMUST00000035065 3 1 1 80 1 151949195 151949213 AACCTCTCCTACTACACCA 58 151949256 151949736 CTCCTTATTTCCCTTCACAC 57 NA Mus musculus 50 Lrrfip2 ENSMUSG00000032497 ENSMUST00000098339,ENSMUST00000035078,ENSMUST00000098340 3 3 3 82 9 111102270 111102289 CAAGGATGTCATTGAAGAGC 58 111102333 111108271 GCCTTTCTAACTCCTTTGAC 58 NA Mus musculus 50 Myd88 ENSMUSG00000032508 ENSMUST00000035092 3 1 1 70 9 119246897 119246915 GGAATGTGACTTCCAGACC 59 119246602 119246620 TAGGAATCAGTCGCTTCTG 58 NA DesignNoJunction Mus musculus 50 Mon1a ENSMUSG00000032583 ENSMUST00000035202 2 1 1 124 9 107802737 107802756 GTATTCTCGCTATGGGTCTG 59 107802843 107803540 CTACCTTGTAGCCATCTGC 59 NA Mus musculus 50 Nfyc ENSMUSG00000032897 ENSMUST00000043429,ENSMUST00000094813 3 2 4 90 4 120446359 120451732 CTCTTCAGAGGAATGATATTGC 58 120446290 120446309 GGTTTCAGTTCATCTCTTGG 58 NA Nonspecific Mus musculus 50 Resp18 ENSMUSG00000033061 ENSMUST00000039534,ENSMUST00000067014 3 2 2 95 1 75270599 75270617 CAACAGTCAAGGTGAACAG 58 75268927 75270541 CAAAGAAACCCTTGGTAGGA 59 NA Mus musculus 50 Lpcat2 ENSMUSG00000033192 ENSMUST00000046290 1 1 1 80 8 95398182 95399464 AACAAGTTGGATACTGTGAC 57 95403315 95403335 GAAGAGTTGACAGAAAGTGAG 58 NA Mus musculus 50 Dpyd ENSMUSG00000033308 ENSMUST00000039177 1 1 1 80 3 118484845 118484863 GAGGATGCAACTTACATGC 58 118484907 118500275 CTTTGAACACCTCAGTAGC 58 NA Mus musculus 50 Cysltr2 ENSMUSG00000033470 ENSMUST00000044664 1 1 1 86 14 73448331 73448351 CTTCAGTGATTTGGTTCAGAG 58 73434247 73448025 CCAGGACAACTTTGATTGC 59 NA InUTR Mus musculus 50 Gabrb3 ENSMUSG00000033676 ENSMUST00000085240,ENSMUST00000039697 2 2 2 107 7 65044309 65047871 ATTGAAAGCTATGGCTACAC 57 65047941 65047959 TACAATGGAGAACTGTGGG 58 NA Mus musculus 50 Cdk10 ENSMUSG00000033862 ENSMUST00000036880 1 1 1 106 8 125752282 125752751 CTTCATCATCCACAGGGAC 59 125753032 125753050 TTACTGGAACACCATAGGC 58 NA Mus musculus 50 Ppp3r1 ENSMUSG00000033953 ENSMUST00000102880 2 1 1 81 11 17094265 17094675 AACAGAAGTTGAGGTTTGC 58 17094720 17094738 AACACCTGGAAGAGTTCTC 58 NA Mus musculus 50 Slc26a2 ENSMUSG00000034320 ENSMUST00000037603 3 1 1 90 18 61361397 61361415 ACATTAGACGGACTCTGTG 58 61359303 61361345 CCATTGCTACCTGATAAACTC 58 NA Mus musculus 50 Dgkh ENSMUSG00000034731 ENSMUST00000110850,ENSMUST00000074729 3 2 2 80 14 79006801 79009328 TATCGTCTGCCAAGATACTC 58 79006740 79006758 TTTCCAGTGTTCTGTCCTG 59 NA Mus musculus 50 Sncb ENSMUSG00000034891 ENSMUST00000036825 1 1 1 60 13 54861254 54861272 CTCTGATGGAACCAGAAGG 59 54860886 54861231 TATTCCTGGTATTCCTCCTG 57 NA DesignRelaxed Mus musculus 50 Rtkn ENSMUSG00000034930 ENSMUST00000065512,ENSMUST00000087938 1 2 2 102 6 83100087 83100912 TCAACAAGGAGACTAGGGT 59 83100978 83100996 TTTGTCACCTCATCATCCC 59 NA Mus musculus 50 Creb3l3 ENSMUSG00000035041 ENSMUST00000048384 2 1 1 80 10 80552102 80552120 ACAGAGGATGAGAAGAAGC 58 80551350 80552058 TCGTTCCTCATACTTGGTG 58 NA Mus musculus 50 CN716893 ENSMUSG00000035427 ENSMUST00000096378,ENSMUST00000113969 3 2 2 290 X 83500754 83501478 TTAGCAATCAAGGCTCGAG 59 83497625 83497644 AATCCTGATTAGAGCAGGAG 58 NA DesignNoJunction, InUTR Mus musculus 50 Rcbtb1 ENSMUSG00000035469 ENSMUST00000043227,ENSMUST00000111255,ENSMUST00000022551,ENSMUST00000111258,ENSMUST00000095778 2 5 5 91 14 59828921 59829279 ACAATGATGAGGTCTTCGT 58 59829334 59829352 TTCTAGTTTCTTGGGCACC 59 NA Mus musculus 50 V1rd9 ENSMUSG00000035523 ENSMUST00000038694 3 1 1 68 7 24444956 24444976 TCCTCTGAATAACCTCAACTG 59 24445006 24445024 CACATGTTTGCACTTCGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Metap2 ENSMUSG00000036112 ENSMUST00000047910 1 1 1 99 10 93332924 93332942 ATTACACTCCCAATGCTGG 59 93331688 93332864 GCACAATCGATTATTCTACCAC 59 NA Mus musculus 50 BC027231 ENSMUSG00000036208 ENSMUST00000048788 3 1 1 83 16 44727288 44729365 TCAGACAGGTAGAACAGTG 58 44729412 44729430 CAGACAACAACTGTGACAG 58 NA Mus musculus 50 Chst12 ENSMUSG00000036599 ENSMUST00000043050 2 1 1 60 5 141000228 141000247 CTCACCTTCAACAAGTTCTG 58 141000270 141000288 TCACCTTCATTAGGTGACG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gtdc1 ENSMUSG00000036890 ENSMUST00000112810,ENSMUST00000049051,ENSMUST00000112813,ENSMUST00000112805 1 4 5 80 2 44426798 44430975 TTGGAGTAGCAATGTTGGA 58 44426736 44426756 GAAAGATCTCAGGATAGACCA 58 NA Mus musculus 50 H2-M10.6 ENSMUSG00000037130 ENSMUST00000041398 1 1 1 97 17 36949693 36949944 GAATAATGGTTATCACACCCTG 58 36950002 36950020 ATCCATAGTATGTGAGCCG 58 NA Mus musculus 50 Tbcel ENSMUSG00000037287 ENSMUST00000066148,ENSMUST00000066179 3 2 2 90 9 42258068 42258086 ATGAAAGAGAAATCGCAGC 58 42252661 42258014 ATCTTACTGACCTCATGCC 58 NA Mus musculus 50 EG382639 ENSMUSG00000037638 ENSMUST00000037962 3 1 1 182 12 113917960 113917978 AAAGAAGGACCCAGATCTG 58 113918276 113918294 CTGAGAACGAATCTTGCTC 58 NA DesignNoJunction Mus musculus 50 NP_001074894.1 ENSMUSG00000038132 ENSMUST00000037923 1 1 1 184 13 46514559 46515653 TACGGATTTGTCACCATGG 59 46517253 46517271 AAAGGTCTCTGGATAAGGG 57 NA DesignNoJunction Mus musculus 50 Aox4 ENSMUSG00000038242 ENSMUST00000040442 3 1 1 80 1 58281061 58284925 CATTCTCCCAGAAGTCTACTG 59 58284965 58284985 TCTCCAAACACTTCTCATCTG 59 NA Mus musculus 50 2810022L02Rik ENSMUSG00000038305 ENSMUST00000041978 1 1 1 80 1 57912358 57936360 TCAAAGAGAAGATCTACGCA 58 57936403 57936421 CAAACTGTTGGAGTACCAG 57 NA Mus musculus 50 Cyp3a16 ENSMUSG00000038656 ENSMUST00000031633 3 1 1 80 5 146216488 146216777 TGTTGCTGTGAAAGATGTG 58 146216426 146216445 AGGGAATCTATGTTCACTCC 58 NA Mus musculus 50 Lmx1b ENSMUSG00000038765 ENSMUST00000041730,ENSMUST00000113150 3 2 2 81 2 33424615 33424634 CAAGGGTGACTATGAGAAGG 59 33422833 33424572 TTCATCCTCACTCTTCACAG 59 NA Mus musculus 50 A230050P20Rik ENSMUSG00000038884 ENSMUST00000043911 3 1 1 99 9 20673887 20674056 TATCGTGTATGGTGTCAAGC 59 20675660 20675679 CTGGATATCTTGGTCTTGCT 59 NA Mus musculus 50 Cdc123 ENSMUSG00000039128 ENSMUST00000043864,ENSMUST00000100445,ENSMUST00000114971 1 3 3 80 2 5742366 5742387 AACTCTCAGTGATATCTTCCTG 59 5731876 5742325 GTGCAATGAATAAACGGCT 59 NA Mus musculus 50 AW209491 ENSMUSG00000039182 ENSMUST00000038690 2 1 1 60 13 14729985 14730004 TCAGGGTGTTAAATTCAGTG 57 14730026 14730045 CTCTTTGCTCTCAGTAAGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tbcd ENSMUSG00000039230 ENSMUST00000106093 3 1 3 201 11 121349730 121349749 CCACTTATTCTGCCTTACCA 59 121355173 121355191 CTTTGGCTTCAGGAAAGTC 58 NA DesignNoJunction, InUTR Mus musculus 50 BC067047 ENSMUSG00000039621 ENSMUST00000036719,ENSMUST00000099080,ENSMUST00000109246 2 3 3 81 2 166397093 166398453 CTATAGAAAGCTCAGGGCG 59 166397030 166397048 CTGGTCAATCTTCACAGCT 59 NA Mus musculus 50 Tspan10 ENSMUSG00000039691 ENSMUST00000044105,ENSMUST00000106212,ENSMUST00000100155 1 3 3 106 11 120306043 120307403 CAGAACCTGTACTTTAACTGC 58 120307471 120307489 CATTGGGTGTTCACTACAG 58 NA Mus musculus 50 Myl6b ENSMUSG00000039824 ENSMUST00000026428 3 1 1 115 10 127931719 127932123 TCTTACCACTCTCGGAGAG 59 127931516 127931535 GGCTTAGGATATGCTTCAGG 59 NA Mus musculus 50 Flywch1 ENSMUSG00000040097 ENSMUST00000045517,ENSMUST00000115465,ENSMUST00000086325 2 3 3 84 17 23897214 23897232 AGGATTGGAGACTCTGAGG 59 23893755 23893773 GGTCTTTAGGAACTCAGGC 59 NA DesignNoJunction Mus musculus 50 Wfdc5 ENSMUSG00000040154 ENSMUST00000045127 2 1 1 80 2 164004368 164004480 GTGTCTTTGTAAAGTCGGG 58 164004306 164004325 AGTCTTTGTTACACATGTGC 58 NA Mus musculus 50 1700034J05Rik ENSMUSG00000040163 ENSMUST00000036592 2 1 2 100 6 146901474 146901492 CTTGTCCAAGCAAAGATCC 58 146901007 146901410 CCTGTCTTATCTCCTGCAC 59 NA Mus musculus 50 Tm7sf3 ENSMUSG00000040234 ENSMUST00000037709 1 1 2 80 6 146570513 146572100 CCTACTCAGAAAGAGATCCC 58 146570452 146570470 AGTCCAAATAGAGGTTGGG 58 NA Mus musculus 50 Ggt6 ENSMUSG00000040471 ENSMUST00000076443 3 1 3 61 11 72250310 72250328 GTACATCCTCATGCAACAG 58 72250656 72250677 GAAGAGCTATTGTAGAAGAGAC 57 NA DesignNoJunction Mus musculus 50 Pcf11 ENSMUSG00000041328 ENSMUST00000040360,ENSMUST00000107182 3 2 2 63 7 99818060 99818078 CCTGTCGGGATTATCAGTC 59 99818015 99818033 ATATTGATGTGCGGTTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ssr2 ENSMUSG00000041355 ENSMUST00000035785 1 1 1 80 3 88387794 88390791 ATGGACCTGTTGTGATTGG 59 88390834 88390853 AGAATCTCCTGTCAAACTCC 59 NA Mus musculus 50 Plekha6 ENSMUSG00000041757 ENSMUST00000038295,ENSMUST00000086504,ENSMUST00000086505 3 3 3 82 1 135169202 135169220 CTATGAACCAGCTTCAGCA 59 135169266 135170450 GTAGAACCTTGAAGGGCTC 59 NA Mus musculus 50 Chchd7 ENSMUSG00000042198 ENSMUST00000108386,ENSMUST00000041122 3 2 2 81 4 3869902 3869923 ATAACTATGACAGGGAAAGGTG 59 3869964 3870551 TGGATCATGACAGAATTCCA 58 NA Mus musculus 50 Tbc1d22b ENSMUSG00000042203 ENSMUST00000048677 1 1 1 80 17 29709973 29709992 AGTACTTTGGCTTCATTGAG 57 29710033 29712110 CAATGTGAATCTGTCTGTAGG 58 NA Mus musculus 50 Adrbk2 ENSMUSG00000042249 ENSMUST00000065167 2 1 1 81 5 113395977 113395995 GCAAGCTGTAGAACATGTC 58 113390651 113395935 GATTTCTTCTATGTATGGCTGG 58 NA Mus musculus 50 Sgtb ENSMUSG00000042743 ENSMUST00000044385 2 1 1 80 13 104911607 104914279 AAGGATGAAGGCAATAACCA 59 104914322 104914340 ATCCAGTTCTATTGCCTGC 59 NA Mus musculus 50 Aqp11 ENSMUSG00000042797 ENSMUST00000084986 3 1 2 115 7 104877565 104877583 GGAGCATTGTTTAACCCAG 58 104875202 104877486 ATCATCAGCACACCTACAG 59 NA Mus musculus 50 Notum ENSMUSG00000042988 ENSMUST00000106177,ENSMUST00000106178,ENSMUST00000055439 3 3 3 234 11 120515831 120516086 CATACGGAGCTATTGGACG 59 120515615 120515635 CATATGCATAAGGAACTGTGC 59 NA DesignRelaxed Mus musculus 50 Usp48 ENSMUSG00000043411 ENSMUST00000105842,ENSMUST00000030549,ENSMUST00000105841,ENSMUST00000097838,ENSMUST00000055131,ENSMUST00000105839,ENSMUST00000105837 2 7 10 81 4 137179292 137181081 GACAATGAAGGGTGATGGA 59 137181124 137181144 CTCATCTAGTTGTTCAAGAGC 58 NA Mus musculus 50 4933433K01Rik ENSMUSG00000043648 ENSMUST00000051493 1 1 1 67 11 59598576 59598594 GATTATGGAGGACACCGAG 59 59598527 59598545 CAAATTCTTCCCAGATGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NM_177711.3 ENSMUSG00000043986 ENSMUST00000052978 3 1 1 60 13 59829149 59829170 AGAGAAGTCTGTTTCTGTAGAG 58 59829110 59829130 AATCTCTAGAGTCTGTTCGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Il1f9 ENSMUSG00000044103 ENSMUST00000057567 3 1 1 93 2 24042739 24042757 TGTTGAGATGGAACACGAG 59 24042812 24043231 AGTTTCTCTTCCTGAGATGTG 59 NA Mus musculus 50 Zfand3 ENSMUSG00000044477 ENSMUST00000052403 3 1 2 106 17 30272426 30272446 GTAACTTCACCGAGTACAGAG 59 30290311 30329523 TTCTCGGACTGTGAATCTG 59 NA Mus musculus 50 Tessp2 ENSMUSG00000044664 ENSMUST00000035715 2 1 1 84 9 110701363 110701671 GTATTTACAGCCGAATCCAG 58 110701718 110701736 TTGATGGGAATCACCAGAC 59 NA Mus musculus 50 Klk14 ENSMUSG00000044737 ENSMUST00000056329 3 1 1 63 7 50947459 50947478 TGTTGTCAGATCAATGGGTC 59 50947504 50949342 AGGGCTACATGAAGAATCG 59 NA DesignNoJunction Mus musculus 50 Spata21 ENSMUSG00000045004 ENSMUST00000051907 2 1 1 80 4 140663065 140663084 GTCACGTGGATTTCAAAGAC 59 140663127 140663256 TCAGGACATTCTGTTCCAC 59 NA Mus musculus 50 2310047M10Rik ENSMUSG00000045176 ENSMUST00000051888 1 1 1 255 11 68873981 68873999 CTCAAGATCCGACTGAGTG 59 68874218 68874236 CTTCACCTAAGGAGTCCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp560 ENSMUSG00000045519 ENSMUST00000068079 3 1 1 89 9 20154086 20154105 TGGGCTATACAACTTAACCC 59 20153595 20154036 GCTATTTGGCAGTTGTATCTC 59 NA Mus musculus 50 Mrps12 ENSMUSG00000045948 ENSMUST00000056078 3 1 1 75 7 29524926 29524944 AAACTCAAAGTTGTGAGGG 57 29524869 29524889 AGACCACTGTGAATTACTGTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Sbsn ENSMUSG00000046056 ENSMUST00000080518 2 1 1 106 7 31538486 31539843 AATGGGTCTCATCAAGGTC 58 31540034 31540052 GGGAAGTTGATAAATGGCT 57 NA DesignNoJunction Mus musculus 50 9930021J03Rik ENSMUSG00000046138 ENSMUST00000059484 1 1 1 60 19 29791550 29791571 CCTACACCTGTAACTACATCTC 59 29791511 29791529 GTATTGTTGCTGACTGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Camk2n1 ENSMUSG00000046447 ENSMUST00000050918 1 1 1 77 4 138012649 138012667 TAGGATTGATGACGTGCTG 59 138012708 138012726 TCAACACATTGTCTTTGGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Adam24 ENSMUSG00000046723 ENSMUST00000051614 1 1 1 60 8 41766150 41766168 TATGCCTAGCTGTACTCTG 57 41766192 41766210 GCGGTTACAACATAGTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Atp10d ENSMUSG00000046808 ENSMUST00000094710 3 1 1 81 5 72679455 72680568 CTTACTTTACCTACCAGGGC 59 72680612 72680630 AGAATGATGAACAGAGCCG 59 NA Mus musculus 50 Catsperb ENSMUSG00000047014 ENSMUST00000055156 3 1 1 80 12 102684266 102684285 AGATCACAATGCATGAAGGA 59 102684328 102701260 ACTGAAGAATAGGCTCTCG 58 NA Mus musculus 50 Olfr64 ENSMUSG00000047163 ENSMUST00000050903,ENSMUST00000106864 2 2 2 60 7 111055533 111055553 CACATTCAATCGTCTCTATCC 58 111055574 111055593 CAGGAAATCTAGCAAGACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 8030462N17Rik ENSMUSG00000047466 ENSMUST00000074653 1 1 2 80 18 77892030 77912651 GCAGAGATACCAGATGGAC 59 77891968 77891988 CACATTTATCACTTCTGGGTC 58 NA Mus musculus 50 Olfr491 ENSMUSG00000049579 ENSMUST00000053179 3 1 1 60 7 115460936 115460956 ACTTCTTCTGTGATTTCTCCC 59 115460976 115460996 CCAATAATGGAGACATCTGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 4921511C20Rik ENSMUSG00000049815 ENSMUST00000051530 2 1 1 60 X 123930162 123930181 GAAGTATTACCTTTCAGCCC 57 123930202 123930222 GGTGTTCTTAAGACTTTCCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Prdx6-rs1 ENSMUSG00000050114 ENSMUST00000057072 3 1 1 60 2 80133320 80133338 TAAGGACAGGGACATTTCC 58 80133360 80133380 GTTAGCATCCTTCTCTACTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Svs3b ENSMUSG00000050383 ENSMUST00000063132 2 1 1 81 2 164080484 164081311 AGACACATTTAGAGGAGTCAC 59 164080423 164080442 AAGGTGTTAAGGACTACAGG 58 NA InUTR Mus musculus 50 Tnfsf15 ENSMUSG00000050395 ENSMUST00000062246 3 1 1 112 4 63405884 63405902 CTTAGCACCCTCCTAATGG 59 63394391 63395296 GGAGGTGAGTAAACTTGCT 59 NA Mus musculus 50 V1rj2 ENSMUSG00000050453 ENSMUST00000053008 3 1 1 60 7 13805346 13805364 ACAGTAGAAGCCTTTCCTC 58 13805388 13805406 GACAGGATGTTATGAGTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Sstr5 ENSMUSG00000050824 ENSMUST00000051864 3 1 1 67 17 25629217 25631973 AGAGATACATGTGCTCTGG 58 25629168 25629187 TAGGTGTGGAAGTCAAAGAG 58 NA DesignNoJunction, InUTR Mus musculus 50 1600021P15Rik ENSMUSG00000051065 ENSMUST00000100023,ENSMUST00000058376 3 2 2 60 16 28829036 28829054 GAGTATCTGTTGCTCTCCG 59 28828994 28829012 ACTCATCTAGGTCCAGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700021P22Rik ENSMUSG00000051113 ENSMUST00000056413,ENSMUST00000107927 2 2 2 135 7 51752383 51752401 TTTGAAAGCAACTTCGTGC 59 51752969 51752987 GTCCATTCTCCTTGTCAGG 59 NA DesignNoJunction Mus musculus 50 A130050O07Rik ENSMUSG00000051480 ENSMUST00000054333 3 1 1 63 1 139825359 139825377 CAATGTGTAGGTGCAAAGG 59 139825402 139825422 ACACTCTTTCTCAGTAGACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Taf9 ENSMUSG00000052293 ENSMUST00000084721 1 1 1 82 13 101424230 101424998 CTCGAGAAGTCTGATCAGC 59 101425043 101425062 CATCATCTGTGCATCTTTCG 59 NA Nonspecific, InUTR Mus musculus 50 Tmco1 ENSMUSG00000052428 ENSMUST00000097473 1 1 1 80 1 169249397 169249415 GGATGAAATCCATGTTCGC 59 169249456 169256023 CCACTCTACCATCAAATATGGA 59 NA Mus musculus 50 Hook2 ENSMUSG00000052566 ENSMUST00000064495,ENSMUST00000098561 2 2 2 80 8 87526452 87526472 CAGAATTCCATACCTTGAGGT 59 87526511 87526604 GACTCTTCTCATAGTCCATCTC 59 NA Mus musculus 50 OTTMUSG00000008033 ENSMUSG00000052767 ENSMUST00000064804 3 1 1 72 4 94697349 94697367 TTCCTCTGAACTACAACGC 59 94697295 94697313 ATGGAAATGAACACTGCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sv2b ENSMUSG00000053025 ENSMUST00000085164 1 1 1 80 7 82293971 82301507 TCATTCCACACTATGGCTG 59 82293909 82293927 CACAGACGATGACAAACAC 59 NA Mus musculus 50 6430503K07Rik ENSMUSG00000053545 ENSMUST00000066038 3 1 1 116 2 147013492 147013773 TTCCAGTTGGCTTTAGTCC 59 147013853 147013871 TCACAAGGCTCTAGAAACC 58 NA DesignNoJunction Mus musculus 50 Cnn3 ENSMUSG00000053931 ENSMUST00000029773 2 1 1 103 3 121152973 121153213 GCATCATATTGTGCGAACTC 59 121154302 121154321 GAAGTTGCCGATATTCTCCA 59 NA Mus musculus 50 Mrgpra2 ENSMUSG00000054040 ENSMUST00000066821 1 1 1 88 7 54720062 54720080 TATCATAGCTTCCACCCTG 58 54719992 54720011 AGACAACCATCATAATGGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 H2-T18 ENSMUSG00000054128 ENSMUST00000025312,ENSMUST00000102675,ENSMUST00000095300 1 3 5 124 17 36323647 36323959 AAGAACAATGGTGGAAACG 58 36323541 36323559 GGAAGATCCTTCATCCCAG 59 NA Mus musculus 50 Spock3 ENSMUSG00000054162 ENSMUST00000093480,ENSMUST00000110270 3 2 2 83 8 65622745 65622763 CAAAGTTTGCATTACGCAG 58 65622808 65699454 CCTCCTACTTCTTTCATACTG 57 NA Mus musculus 50 Lrrc36 ENSMUSG00000054320 ENSMUST00000109355,ENSMUST00000067305 2 2 2 80 8 107973659 107973679 GTGGAGACTTACTAACATCCC 59 107973721 107975918 TGGCATAGAGATCTGAGCT 59 NA Mus musculus 50 ENSMUSG00000054663 ENSMUSG00000054663 ENSMUST00000067831 1 1 1 65 6 51235554 51235572 GAAACAAGAGACAAGAGGG 57 51235507 51235525 AAATTGTATGCAATGGCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nell1 ENSMUSG00000055409 ENSMUST00000081872 3 1 1 184 7 57956587 57956605 TCCTTCTGGATTCACAGGA 59 58081758 58103861 CATCAATATCAATGCAGGACTC 59 NA Mus musculus 50 Zbtb25 ENSMUSG00000056459 ENSMUST00000070570 3 1 1 237 12 77456933 77456951 TTTACTTCAAAGCCCACAG 57 77451025 77451046 GGGTTGTTGAAATCTGAATACC 59 NA DesignNoJunction, InUTR Mus musculus 50 ENSMUSG00000056640 ENSMUSG00000056640 ENSMUST00000070887 3 1 1 60 14 70058240 70058260 TCATGGTGTCTAAGTATCCAC 58 70058200 70058221 TAGTACTAGCTCCCAGATACAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sphk2 ENSMUSG00000057342 ENSMUST00000107738,ENSMUST00000107737,ENSMUST00000072836 3 3 3 123 7 52967915 52967935 CATATTGGTCAATCCCTTTGG 59 52967708 52967830 ATGGTTCTGTCGTTCTGTC 59 NA Mus musculus 50 Olfr1504 ENSMUSG00000059105 ENSMUST00000078282 1 1 1 60 19 13961889 13961907 CAAATCCCTCTGGGAAGAC 59 13961847 13961866 CAACATAGGAATCACCACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG432649 ENSMUSG00000059301 ENSMUST00000071825 2 1 1 120 12 36817177 36817195 CTTGTTACAGAGGTTGCAG 58 36817279 36817297 GGTAGTAACCCTCATCTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ndufs8 ENSMUSG00000059734 ENSMUST00000075092 1 1 1 95 19 3911249 3911576 GGCAACGTACAAGTATGTG 58 3911172 3911190 TCTGTCCACATCAGAATCC 58 NA Mus musculus 50 Serpinb6a ENSMUSG00000060147 ENSMUST00000017188,ENSMUST00000043552 1 2 2 114 13 34014880 34014899 TCTGATACATCGCTAGTCCT 59 34010756 34014803 TCTCCTCATTCTTGCTGAC 58 NA Mus musculus 50 Casc4 ENSMUSG00000060227 ENSMUST00000078752,ENSMUST00000089912,ENSMUST00000110586,ENSMUST00000089915 2 4 4 113 2 121731707 121731726 TAGAAACGATCATGGAGCAC 59 121731801 121732446 CGTTTGAGTTGTTCTTTCCC 59 NA Mus musculus 50 Pwwp2b ENSMUSG00000060260 ENSMUST00000093993 3 1 1 231 7 146442015 146442033 TGACTGAAGATGGAAGGAC 58 146452539 146452557 GATACATTCAGCCGAGAGG 59 NA DesignNoJunction, InUTR Mus musculus 50 2010003H20Rik ENSMUSG00000061531 ENSMUST00000077517 3 1 1 119 2 14117616 14117634 GAATCCTTACCTGATCTGC 57 14117716 14140511 GTCATTGTCTTCATAACCCT 57 NA Mus musculus 50 Cd200r2 ENSMUSG00000062082 ENSMUST00000116600,ENSMUST00000114626 2 2 3 102 16 44833638 44838069 GAGTCAAGGTACAATGACC 57 44838134 44838153 GAAGAAAGCAAATCCTACGT 58 NA Mus musculus 50 2810051F02Rik ENSMUSG00000064070 ENSMUST00000079529 2 1 1 68 17 13007497 13007515 TTGATCCACTTGCAAACAC 58 13007547 13007565 ATGTTTGCTCTTCGGACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG406223 ENSMUSG00000064232 ENSMUST00000062879 2 1 1 81 15 101455985 101456005 GAGGTCAAGACACAATATGAG 58 101455505 101455944 GCTCCTCATATTTAGTCTGGT 58 NA Mus musculus 50 Nrxn3 ENSMUSG00000066392 ENSMUST00000110138 2 1 4 185 12 90034162 90034180 TCTCAAGTATGGCAACTCG 59 90034329 90071006 TGACTGACATCTTCTGAGC 58 NA Mus musculus 50 Olfr876 ENSMUSG00000066750 ENSMUST00000086064 3 1 1 60 9 37612302 37612320 CAAGGAAAGGTGTCTTCCT 59 37612341 37612362 AGATCAGAGGATTCAACATAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2010002M12Rik ENSMUSG00000067297 ENSMUST00000087357 2 1 2 115 19 34694662 34704227 GCAACATGAGTGAAGAATCTC 59 34694567 34694588 GATTTCTAAGTCATGGATGTGC 59 NA Mus musculus 50 EG623898 ENSMUSG00000067848 ENSMUST00000088616 1 1 1 88 5 11596332 11597599 TTACAATAGGACCAAGCCC 58 11597651 11597669 TATGCACAGAAGACAGGAC 58 NA Nonspecific Mus musculus 50 Mas1 ENSMUSG00000068037 ENSMUST00000089015 3 1 1 89 17 13039275 13040957 CAGCTACTTCTCAAGGAGG 59 13039204 13039222 TAGTCAGTTAGTCAGTGGC 58 NA InUTR Mus musculus 50 ENSMUSG00000068623 ENSMUSG00000068623 ENSMUST00000090285 3 1 1 60 14 30758915 30758934 ACAATGGATTCTAACCAAGC 58 30758874 30758892 AAGAGGTAAGGAGGGACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930589L23Rik ENSMUSG00000068957 ENSMUST00000091023 2 1 1 61 3 79373062 79373080 GACTGGAGATCTCTTCCCA 59 79373105 79376148 TTTCTGGAGTTGGACTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nr2f1 ENSMUSG00000069171 ENSMUST00000091458 3 1 1 96 13 78329270 78334436 GCTATTCACGTCAGATGCT 59 78329192 78329210 GCTTCTCACATACTCCTCC 59 NA Mus musculus 50 Dusp22 ENSMUSG00000069255 ENSMUST00000091672 3 1 2 119 13 30799957 30800550 ATGAAGTGCACCAGTATCG 59 30802589 30802607 GAAAGGCCCAGTACTTCAG 59 NA Mus musculus 50 1700012B15Rik ENSMUSG00000069618 ENSMUST00000035629 1 1 1 256 12 3237370 3237388 GAAGTCAAAGGACCAGGAG 59 3238154 3238172 TGGTAGAGTCTCAGACAGG 59 NA DesignNoJunction, InUTR Mus musculus 50 ENSMUSG00000070511 ENSMUSG00000070511 ENSMUST00000094315 3 1 1 61 7 78495659 78495678 TCATTGTATCACCTGGTCTC 58 78495617 78495636 AATATTTGCCTTGAATGGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mkrn3 ENSMUSG00000070527 ENSMUST00000094340 1 1 1 60 7 69563786 69563806 CTACTGTCTTAGGTGTATCCG 59 69563746 69563766 ACTGATCCTGTTCTCAAACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Psg21 ENSMUSG00000070796 ENSMUST00000094793 2 1 1 60 7 19240126 19240144 GTAACCATGGAGAACTGGA 58 19237978 19240103 AAATGAGAGGAGTAGACCTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000071316 ENSMUSG00000071316 ENSMUST00000084187 2 1 1 92 14 70008929 70008947 TATAGAGAAACTAGCGGCA 57 70008855 70008873 AAGTTCAACAAAGGGTGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm94 ENSMUSG00000071858 ENSMUST00000096570 2 1 1 73 18 43944281 43944299 TTAAGCATCCTGGGTTCAG 59 43940919 43944244 CTTGATCCTCTGGACATGG 59 NA DesignNoJunction Mus musculus 50 4930522L14Rik ENSMUSG00000072762 ENSMUST00000112547 2 1 2 155 5 110168019 110168225 TGCTGTAGGCTACAATTGG 59 110166732 110166751 TGCATTCGGAAACTATTGTG 58 NA DesignRelaxed Mus musculus 50 Gpr174 ENSMUSG00000073008 ENSMUST00000101294 1 1 1 84 X 104451765 104451783 TAGCATCCTCATTGGAGTG 58 104451831 104464231 TTCATTCATGCCGTTTCAG 58 NA InUTR Mus musculus 50 Lst1 ENSMUSG00000073412 ENSMUST00000097336,ENSMUST00000113924,ENSMUST00000113923 2 3 3 129 17 35325302 35325320 GGTAACAATTGCACAACCA 58 35323535 35323895 TTTCCAGTCTCTTCACTCTC 58 NA Mus musculus 50 NP_001028393.1 ENSMUSG00000073414 ENSMUST00000097337 3 1 1 164 17 35202335 35202353 GTACGAGTATCCCAAGGTC 58 35201307 35201325 ATCACCAGAAACCACTGTG 59 NA DesignNoJunction Mus musculus 50 Polr3e ENSMUSG00000073851 ENSMUST00000098072 3 1 1 84 7 128090583 128090602 GTACTAAATGTGCTCTGTGC 58 128090649 128090667 AGCAACAGATGGACATGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr665 ENSMUSG00000073917 ENSMUST00000098165 1 1 1 60 7 112030068 112030087 GTATCTATTGCTACCTCCCA 57 112030109 112030128 AATCTGCTTGGTCTTTACTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 0610010E21Rik ENSMUSG00000074210 ENSMUST00000098585 1 1 1 132 7 31107303 31107321 CAAGTTCTGAGCCTGTACC 59 31107189 31107207 ACAGATACTCGATACGCAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 EG547103 ENSMUSG00000074347 ENSMUST00000098764 1 1 1 60 8 56208250 56208269 TCAGAAAGACCATCAAGTCC 59 56208292 56208310 AAGTCCTTTACAAAGGGCA 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 1700041B20Rik ENSMUSG00000074825 ENSMUST00000099409,ENSMUST00000110386 2 2 2 60 2 126967246 126967264 ACCCAGAATTTCGATGTCC 59 126967204 126967224 CCAAGATAAACATAGTGCCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074853 ENSMUSG00000074853 ENSMUST00000099430 1 1 1 79 10 81641654 81641674 CCTACATTAGCTATGTTGCTG 58 81641715 81641733 AAAGACTGTGCTGTTTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Oxct2b ENSMUSG00000076438 ENSMUST00000102648 2 1 1 214 4 122794530 122794548 CAAGATGACCGTCTACCTG 59 122794726 122794744 ATTGAGAAACTTGCATGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV8-19 ENSMUSG00000076588 ENSMUST00000103389 1 1 1 89 6 70291179 70291405 TCTGGGTATCTGGTACCTG 59 70291108 70291126 AGCTCATAGTGACCTTCTC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 IGKC ENSMUSG00000076609 ENSMUST00000103410 3 1 1 60 6 70676652 70676670 CAAGGACGAGTATGAACGA 59 70676693 70676712 AGTTGATGTCTTGTGAGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gprc5c ENSMUSG00000078250 ENSMUST00000105047 1 1 1 88 11 114732915 114732933 GATGGTGTCATGGTACCAG 59 114732985 114733003 TAGAAGAGGCTCTGTCTGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 NP_001098626.1 ENSMUSG00000078802 ENSMUST00000108550 1 1 1 80 7 10571663 10571681 GAGATGAATCTGCAACAGG 58 10570174 10571619 GGAGTTTACCTTCAAGCAG 58 NA Nonspecific Mus musculus 50 Capn3 ENSMUSG00000079110 ENSMUST00000110721,ENSMUST00000028749,ENSMUST00000110720 2 3 7 61 2 120289734 120289752 CTATTCGGCCATCATTAGC 58 120289774 120289795 GCTCAAATGTCTTCTCTTTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG434459 ENSMUSG00000079244 ENSMUST00000096170 3 1 1 92 14 52275598 52277384 TTTGAACTACAGCATCAGG 57 52277439 52277458 AGCTTTCTGTTCTCATTCAG 57 NA DesignRelaxed Mus musculus 50 Neu2 ENSMUSG00000079434 ENSMUST00000070898 3 1 1 117 1 89491627 89491645 GAAGAGGAAGCTACAACGA 59 89493174 89493192 TGCTTGTCATACAAGGGAC 59 NA DesignNoJunction Mus musculus 50 Pin4 ENSMUSG00000079480 ENSMUST00000113627 1 1 1 88 X 99317071 99322364 TGCAGTAAAGGTCAGACAC 59 99322415 99322434 CACTGAATCTCATCCCAGAC 59 NA Nonspecific Mus musculus 50 H2-T10 ENSMUSG00000079491 ENSMUST00000074201 2 1 1 257 17 36257225 36257254 CCTGTACAGTGGGAAACAG 59 36256266 36256284 CAAACTCCACTTCTTGGGT 59 NA DesignRelaxed Mus musculus 50 Pglyrp2 ENSMUSG00000079563 ENSMUST00000114456,ENSMUST00000114455 2 2 3 160 17 32554978 32554996 GAACATTAGCCAAGAGCAG 58 32553944 32553962 ATAAGAATCCAAGTGGCAG 57 NA DesignNoJunction Mus musculus 50 Trim25 ENSMUSG00000000275 ENSMUST00000000284,ENSMUST00000107896,ENSMUST00000107895,ENSMUST00000100620 2 4 5 80 11 88877120 88877515 AGCTTCTGGAGTATTTCGT 58 88877559 88877577 TGGTGTACTTGTTTGACAG 57 NA Mus musculus 50 Gnb1l ENSMUSG00000000884 ENSMUST00000000904,ENSMUST00000115601,ENSMUST00000090086,ENSMUST00000115600 1 4 5 120 16 18544259 18544277 ATCATGGACTCAGTTCAGC 59 18544361 18548198 CCAGAATCTGAACCTCGTC 59 NA Mus musculus 50 Efnb2 ENSMUSG00000001300 ENSMUST00000001319,ENSMUST00000098947 3 2 2 82 8 8622440 8623161 GAAAGTTGGACAAGATGCA 58 8622376 8622394 TTGTACCAGCTTCTAGCTC 58 NA Mus musculus 50 Tcf25 ENSMUSG00000001472 ENSMUST00000108839 1 1 4 80 8 125905398 125905416 TAAACATGGAAACGCAGAG 58 125905459 125907241 TCTTCTAGTCCATTCTCCTG 57 NA Mus musculus 50 Nr1h3 ENSMUSG00000002108 ENSMUST00000111356,ENSMUST00000111354,ENSMUST00000111355,ENSMUST00000002177,ENSMUST00000111358 2 5 5 129 2 91032889 91033781 TTCTCCTGATTCTGCAACG 59 91032778 91032796 CCCTATCCCTAAAGCAACC 59 NA Mus musculus 50 Mast2 ENSMUSG00000003810 ENSMUST00000106484,ENSMUST00000106486,ENSMUST00000046416 2 3 5 81 4 116003066 116006027 GAACAGACAGGACTGATGG 59 116003003 116003021 GTAGAGCTAGGAGTGTTGG 58 NA Mus musculus 50 Cabp5 ENSMUSG00000005649 ENSMUST00000005791,ENSMUST00000086152 2 2 2 80 7 13988702 13988720 CCAAATTGCTTGCAGAGAC 59 13988764 13990764 CTCCATTGGCATCAAACTC 58 NA InUTR Mus musculus 50 Wbp7 ENSMUSG00000006307 ENSMUST00000006470 1 1 2 115 7 31355852 31358991 CATCACTATTCAGGCGAGG 59 31355755 31355773 TCACTGCTGATCTCAAAGC 59 NA Mus musculus 50 Tek ENSMUSG00000006386 ENSMUST00000102798,ENSMUST00000071168 2 2 3 82 4 94465958 94470981 CTGATTGTTCGGAGATGTG 58 94471027 94471045 CAGACTCCATTGTTCTTGC 58 NA Mus musculus 50 Zfp313 ENSMUSG00000006418 ENSMUST00000109214,ENSMUST00000078050,ENSMUST00000081763 2 3 3 81 2 167332686 167336383 TGCCGTAAGAATTTCATCCT 59 167336424 167336445 CACCTTCCATGATGTAATTCTG 59 NA Mus musculus 50 Sfmbt1 ENSMUSG00000006527 ENSMUST00000112184,ENSMUST00000054230,ENSMUST00000112177,ENSMUST00000060778 2 4 4 80 14 31630052 31630902 TCCTTGATCAGGAAATCGAC 59 31630944 31630963 CCAACTTTAAGTCCATGCAC 59 NA Mus musculus 50 Pou2f2 ENSMUSG00000008496 ENSMUST00000108414 2 1 8 86 7 25885027 25885047 CAAATCTATTCCAGCTACCTC 57 25882825 25884979 GAGTCATAGCCTGTGTAGG 58 NA Mus musculus 50 Rps15a ENSMUSG00000008683 ENSMUST00000106588 3 1 2 174 7 125258988 125259006 TCGAAGGCTATCTTCTGTG 58 125258363 125258626 AATTCACCAATGTATCCGTG 58 NA InUTR Mus musculus 50 Nf2 ENSMUSG00000009073 ENSMUST00000109910,ENSMUST00000056290,ENSMUST00000053079,ENSMUST00000093374,ENSMUST00000109908 3 5 6 93 11 4699928 4699948 TATCTATGACCCTGAGAACAG 58 4694912 4699874 AATAGTAAACTCCTTGTCGC 57 NA Mus musculus 50 Pabpc4 ENSMUSG00000011257 ENSMUST00000106243,ENSMUST00000106241,ENSMUST00000080178,ENSMUST00000078734,ENSMUST00000094192 1 5 6 80 4 122967570 122968120 TCAGCCAGTTTGGTAAGAC 59 122968164 122968182 AACTTACAAAGCCAAAGCC 58 NA Nonspecific Mus musculus 50 Git1 ENSMUSG00000011877 ENSMUST00000100812 2 1 2 81 11 77314222 77314240 TATCTCTGTGGACGAAAGC 59 77314614 77316536 ATTCAGACAGATCCAAGCTG 59 NA Mus musculus 50 Ehf ENSMUSG00000012350 ENSMUST00000090475,ENSMUST00000111177,ENSMUST00000111176,ENSMUST00000111172,ENSMUST00000111179,ENSMUST00000111174 3 6 6 102 2 103119680 103119698 ACCTACAGCATCTCAAGTG 58 103114264 103116931 TTCATGATGGAAGGATCGG 59 NA Mus musculus 50 Prdm15 ENSMUSG00000014039 ENSMUST00000095849,ENSMUST00000113740 3 2 2 82 16 98016259 98017270 AGAGTATCCAACAGGTGGT 59 98016195 98016213 GGTGATGTTGGTTAGACCA 59 NA Mus musculus 50 Abo ENSMUSG00000015787 ENSMUST00000102900,ENSMUST00000114045,ENSMUST00000015931 2 3 3 92 2 26703793 26703811 TTCAGAAGCCAGAACTTGG 59 26701595 26702098 AAGAACATCTTTCCTAGTGGG 59 NA Mus musculus 50 Cacna1d ENSMUSG00000015968 ENSMUST00000057695 2 1 3 124 14 30908509 30908528 GAAAGTCATTGCTTTCAAGC 58 30896167 30903010 TCTCACTTTCAGATGGGTC 58 NA Mus musculus 50 Nlrp14 ENSMUSG00000016626 ENSMUST00000084763,ENSMUST00000016770 2 2 2 120 7 114340819 114341297 TGGAATTTCTAGCGTTAGAC 57 114341377 114341398 CTTTCTGTATTAGGACACTCTG 57 NA Mus musculus 50 Pscd1 ENSMUSG00000017132 ENSMUST00000017276,ENSMUST00000106305,ENSMUST00000106304,ENSMUST00000106302 3 4 5 88 11 118027405 118030344 GATCAAATGCATCAAGGCT 58 118027335 118027353 GTCTCTTTGTGGAGGAGAC 59 NA Mus musculus 50 Cd40 ENSMUSG00000017652 ENSMUST00000017799,ENSMUST00000109305 3 2 4 117 2 164892057 164895140 CATCTGTGGTTTAAAGTCCC 58 164895321 164895339 CTTTGGTTTCTTGACCACC 58 NA Mus musculus 50 Ksr1 ENSMUSG00000018334 ENSMUST00000100745 3 1 5 94 11 78846780 78846798 ACCTCATCTAATCCCTCCA 58 78844609 78846722 TGAATGAAGTAGGCAGCTG 59 NA Mus musculus 50 Mapt ENSMUSG00000018411 ENSMUST00000018555,ENSMUST00000106989,ENSMUST00000106988 3 3 10 83 11 104160561 104163683 CAACTTAAAGCTCGTGTGG 59 104166531 104166549 TTTAGCACAGGAAGGTGTG 59 NA Mus musculus 50 Phf23 ENSMUSG00000018572 ENSMUST00000018716 3 1 2 117 11 69811330 69811810 CTAGCAAAGAGGAAAGCGA 59 69811890 69811909 GTCTGGATAGTTCGAAGGTC 59 NA Mus musculus 50 Zfyve27 ENSMUSG00000018820 ENSMUST00000018964 3 1 2 102 19 42258665 42260114 AAAGATGCAATTGAGGAGAC 58 42260343 42260361 TGAGGAATCCATTGTCCTG 58 NA Mus musculus 50 Esr1 ENSMUSG00000019768 ENSMUST00000105590,ENSMUST00000067086,ENSMUST00000105589 1 3 4 86 10 5407248 5407266 TGATGATTGGTCTCGTCTG 59 5377372 5407198 TACCTTGATTCCTGTCCAG 58 NA Mus musculus 50 Utrn ENSMUSG00000019820 ENSMUST00000076817 3 1 2 80 10 12429809 12429827 GACCAAGGTTTCCAGAGAC 59 12418897 12429766 ATGACTTCTGAATCAGCCTC 59 NA Mus musculus 50 Gje1 ENSMUSG00000019867 ENSMUST00000020016 1 1 1 61 10 14437070 14437088 CTGTTACAATCAGTTCCGG 58 14436593 14436611 CAATCACTAGCTGCAATGC 59 NA DesignNoJunction Mus musculus 50 Btbd11 ENSMUSG00000020042 ENSMUST00000105307,ENSMUST00000038045,ENSMUST00000105306,ENSMUST00000020231 3 4 4 115 10 85114412 85117232 ATCATGGAGCTTCTGTCTG 59 85117311 85117329 TGGCTGTAGATATCCACAC 58 NA Mus musculus 50 Rab1 ENSMUSG00000020149 ENSMUST00000020358,ENSMUST00000074741 1 2 4 80 11 20123121 20123142 TCACTTCCAGTTATTACAGAGG 59 20123180 20124388 TAACGTTATTGAAGGACTCCTG 59 NA Mus musculus 50 Ccdc139 ENSMUSG00000020280 ENSMUST00000020520,ENSMUST00000109525,ENSMUST00000058163 1 3 4 80 11 23606932 23607526 AGATTGCCATTTCCTAGGT 58 23608759 23608777 GCCATTCTGGTAAATACCG 58 NA Mus musculus 50 Snx11 ENSMUSG00000020876 ENSMUST00000021246,ENSMUST00000107661,ENSMUST00000107660 1 3 3 146 11 96634188 96634459 ATTCCTCCATACGAACAGC 59 96632403 96632421 AAGAAAGTGGACTTCCCAG 59 NA Mus musculus 50 Lrrc16 ENSMUSG00000021338 ENSMUST00000021771 1 1 7 115 13 24105320 24111441 CAACAAATGCCTCAAGGAG 59 24105223 24105241 CTCTTCTCCAGAGTCACTG 58 NA Mus musculus 50 Tcfap2a ENSMUSG00000021359 ENSMUST00000021787,ENSMUST00000080429,ENSMUST00000110193,ENSMUST00000110192 2 4 4 83 13 40818688 40820513 ACTGTAATTAAGAAAGGCCC 57 40818624 40818644 GAGGTTGTCCTTGTTAATAGG 58 NA Mus musculus 50 Spin1 ENSMUSG00000021395 ENSMUST00000057478,ENSMUST00000099516,ENSMUST00000095797 2 3 4 91 13 51239896 51244340 CTGATTCCAATGATTCGCC 58 51244393 51244413 GTCTTCTTTGGCATATTCCAC 59 NA Mus musculus 50 Mctp1 ENSMUSG00000021596 ENSMUST00000109583,ENSMUST00000046098 1 2 5 80 13 76871061 76896256 ATCCAGTAAGTTTCAGACCC 59 76896299 76896317 ATGCTGACTATTCCTCTCC 58 NA Mus musculus 50 Pde8b ENSMUSG00000021684 ENSMUST00000022192 1 1 3 80 13 95860279 95860297 TGTTTACAGCGTTAGACCA 58 95822870 95860235 GATGAATCCGGTGAATCTG 57 NA Mus musculus 50 Oxct1 ENSMUSG00000022186 ENSMUST00000110690,ENSMUST00000022792 2 2 2 81 15 4078857 4078875 AGGAGCTATGGATTTGGTG 59 4078919 4092806 TTTATGAGCATTTCCCTTCG 58 NA Mus musculus 50 Ctnnd2 ENSMUSG00000022240 ENSMUST00000110414 3 1 3 111 15 30835492 30835510 CAAACCCTACCTCACACTG 59 30835584 30851624 GATATACACGGACCACTTCC 59 NA Mus musculus 50 Dmc1 ENSMUSG00000022429 ENSMUST00000023065,ENSMUST00000080992 1 2 2 80 15 79426750 79430488 CAACAAGCTTATTGAACCAG 57 79426689 79426709 CCAGTAGTGATATGGAATACC 57 NA Mus musculus 50 D15Wsu75e ENSMUSG00000022472 ENSMUST00000023110,ENSMUST00000100399 1 2 3 100 15 81846351 81846369 GAAGCTCTACGTGTACGAC 59 81833024 81834190 CAACTATAGAGGTGTGCCAG 59 NA Mus musculus 50 Plec1 ENSMUSG00000022565 ENSMUST00000023226 1 1 10 80 15 76025234 76025863 GGCAAGAAAGATGAACGAG 58 76024852 76025190 CCTCTGAGCCTTGATAAGG 59 NA Mus musculus 50 Lypd2 ENSMUSG00000022595 ENSMUST00000023260 1 1 1 144 15 74563407 74563425 CAAGACTACGCTCTACTCC 58 74562854 74562872 TAGGTCAGAATTGCAGCAG 59 NA DesignNoJunction Mus musculus 50 Phf10 ENSMUSG00000023883 ENSMUST00000115639,ENSMUST00000024657 2 2 2 85 17 15093041 15093061 CGAGATTTATCTCACAAGGAG 57 15092159 15092994 AATGCTGTTAAACCCAGTG 58 NA Mus musculus 50 Lpin2 ENSMUSG00000024052 ENSMUST00000112646,ENSMUST00000112649,ENSMUST00000053173,ENSMUST00000112647,ENSMUST00000024848 2 5 5 85 17 71578679 71578697 GACTACAAGGAGCCTTCAC 59 71578745 71579620 GGGTAGGTGGTTTCTAATGG 59 NA Mus musculus 50 Telo2 ENSMUSG00000024170 ENSMUST00000115181,ENSMUST00000024987 3 2 3 88 17 25244064 25244280 CTCATACAGGTGCTTAAGGAG 59 25243996 25244014 CTGATGTAACACTGCTGCT 59 NA Mus musculus 50 Axin1 ENSMUSG00000024182 ENSMUST00000074370 1 1 2 178 17 26327165 26329467 CTCCAAGCAGAGGTATGTG 59 26330924 26330942 CAACAATGCTGTCACATGG 59 NA Mus musculus 50 Rnf138 ENSMUSG00000024317 ENSMUST00000072847 3 1 2 81 18 21179432 21179451 TCAAATTTCACCAGACAACG 58 21179494 21184599 CTAGCTGAAGATTCACAGGA 58 NA Mus musculus 50 Cabyr ENSMUSG00000024430 ENSMUST00000080415,ENSMUST00000115857 2 2 2 80 18 12903108 12903127 CCAATCCAACAAACATCACC 59 12903168 12903279 CTAGAGACGAATTCCCTTCTC 59 NA Mus musculus 50 Hdac3 ENSMUSG00000024454 ENSMUST00000043498 1 1 2 85 18 38104603 38104621 GAAGCCTTCTACCTCACTG 59 38103854 38104554 TACATGTCACCTGTTCCAG 58 NA Mus musculus 50 Osbp ENSMUSG00000024687 ENSMUST00000025590,ENSMUST00000112953 3 2 2 87 19 12053420 12053438 ACTACAGCCTCAACTTGTG 59 12053488 12058410 GGCTCATTAAAGTTTACCGG 58 NA Mus musculus 50 Kcnk7 ENSMUSG00000024936 ENSMUST00000052448,ENSMUST00000113613 3 2 2 97 19 5706457 5706713 CACTTCTTGGTTACTTGCTC 58 5706772 5706791 AAAGAATTTCACCATGGCAC 59 NA Mus musculus 50 D11Bwg0517e ENSMUSG00000025576 ENSMUST00000106278,ENSMUST00000103023 1 2 5 130 11 118357703 118358268 ATTCCAACTTATGGAGCGG 59 118355534 118356544 CTACCATAACTGTCACTGTAGG 59 NA Mus musculus 50 Rps6ka6 ENSMUSG00000025665 ENSMUST00000096348,ENSMUST00000082034,ENSMUST00000113428 1 3 6 94 X 108512256 108512274 TCCTGAGGAAATACTGCTG 58 108504818 108512198 AAAGCAAATCCTTTGCTCC 58 NA Mus musculus 50 Rps6ka6 ENSMUSG00000025665 ENSMUST00000096348,ENSMUST00000082034,ENSMUST00000113428 3 3 6 105 X 108512266 108512284 CCAATGATACTCCTGAGGA 57 108504817 108512197 GAAAGCAAATCCTTTGCTC 57 NA Mus musculus 50 Mybl1 ENSMUSG00000025912 ENSMUST00000115468 1 1 2 84 1 9660084 9662302 AGACATGCAGTCAAATTGTG 59 9660019 9660037 TCTTCTCGCTTGTTCAGTC 59 NA Mus musculus 50 Zap70 ENSMUSG00000026117 ENSMUST00000027291 2 1 2 155 1 36835425 36835603 CATTCACTCAGCCTCAGAG 59 36836036 36836054 CTTTGAGTTCCTCAGGGTC 59 NA Mus musculus 50 4921533L14Rik ENSMUSG00000026153 ENSMUST00000027337,ENSMUST00000097806 3 2 2 80 1 24021668 24021687 GATCGCTATGTTCCTTACCA 59 24019326 24021626 ATAGATTTGTCCTGACTGCT 58 NA Mus musculus 50 Bcs1l ENSMUSG00000026172 ENSMUST00000027358,ENSMUST00000113732,ENSMUST00000113733 3 3 3 83 1 74636379 74636398 TACCTTCAGCATGAAAGTGG 59 74636442 74636543 TCCCTGATACCAAATGAAGTG 59 NA Mus musculus 50 Rassf5 ENSMUSG00000026430 ENSMUST00000027688,ENSMUST00000068564 2 2 2 99 1 133077241 133077744 CAAAGATGGACAAGTGCTC 58 133077160 133077178 CACAAAGCTGAGAACATCG 59 NA Mus musculus 50 Tagln2 ENSMUSG00000026547 ENSMUST00000111230,ENSMUST00000111232,ENSMUST00000111228 3 3 3 87 1 174436342 174436360 GACACTAATGAACCTGGGT 58 174436408 174436707 CTTGGATTTCTTAGGAAACCAG 58 NA Mus musculus 50 Dclre1c ENSMUSG00000026648 ENSMUST00000115066,ENSMUST00000115067,ENSMUST00000061852 3 3 7 80 2 3370455 3374820 AGAGATGAAATCACAGTGGAC 59 3375968 3375986 CTTCAGACTCCATTGACCA 58 NA Mus musculus 50 Fcgr2b ENSMUSG00000026656 ENSMUST00000081103 2 1 3 104 1 172895910 172895928 TATTGACAATTGTGGCTGC 58 172891356 172895842 GAGGATTGTCTGGAACCTG 59 NA Mus musculus 50 Dnm1 ENSMUSG00000026825 ENSMUST00000113357 3 1 9 131 2 32172519 32172817 GGAATTGCTTAAGGAGAAAGAG 59 32171422 32172427 TAGACATTCCTCTGCTCTG 58 NA Nonspecific Mus musculus 50 Egfl7 ENSMUSG00000026921 ENSMUST00000080087,ENSMUST00000102906,ENSMUST00000102907,ENSMUST00000100290 1 4 4 130 2 26447239 26447646 GCTAGAACAGAAACTGCAG 58 26447740 26447758 GTGAATCAATTCGGTCCAG 58 NA Mus musculus 50 Sdccag3 ENSMUSG00000026927 ENSMUST00000114102,ENSMUST00000100296 3 2 7 132 2 26244467 26244485 GTTTATGTGCTATGTGCCC 58 26243178 26244016 TTCAAGTTTGTCACCTCCA 58 NA Mus musculus 50 Camsap1 ENSMUSG00000026933 ENSMUST00000114167,ENSMUST00000061377,ENSMUST00000114164,ENSMUST00000097831,ENSMUST00000091268 2 5 5 80 2 25821340 25822220 GCACCTATTAAGATGAGTGG 57 25821279 25821297 CTCAATGCTGATCATCTCC 57 NA Mus musculus 50 2010317E24Rik ENSMUSG00000026955 ENSMUST00000114293,ENSMUST00000100323 2 2 3 231 2 25228416 25228434 AACCCTGAGCTGTTATGTG 59 25230582 25231220 CCTTCATCTGCTTCAACAG 58 NA DesignRelaxed Mus musculus 50 Lrp2 ENSMUSG00000027070 ENSMUST00000092551 3 1 3 113 2 69365655 69365673 TTGTGACCAGAAGTGTGAG 59 69365334 69365581 TCAATACCTAGTAAGGAGTCGT 59 NA Mus musculus 50 Tfpi ENSMUSG00000027082 ENSMUST00000111718,ENSMUST00000028487,ENSMUST00000090732,ENSMUST00000111714,ENSMUST00000111717,ENSMUST00000111712 3 6 8 88 2 84284292 84284911 TCTGTGAGAATCCAGTCCA 59 84284222 84284242 GCGATCAGTTACAGTATTTCC 58 NA Mus musculus 50 Meis2 ENSMUSG00000027210 ENSMUST00000110908,ENSMUST00000074285 3 2 7 162 2 115693091 115694495 AGTCAAATCGAGCAGTGAG 59 115692583 115692601 TACATATAGTGCCACTGCC 58 NA Mus musculus 50 Phactr3 ENSMUSG00000027525 ENSMUST00000108917,ENSMUST00000108916,ENSMUST00000103066,ENSMUST00000029031,ENSMUST00000108915,ENSMUST00000108914,ENSMUST00000103065 1 7 7 80 2 178066339 178067539 CAAGAAAGCTTAACCAGAGAC 58 178067578 178067599 CTTCCACATAATCACTGAAACG 59 NA Mus musculus 50 Clcc1 ENSMUSG00000027884 ENSMUST00000106609,ENSMUST00000106611,ENSMUST00000106610,ENSMUST00000106613,ENSMUST00000029483 3 5 5 82 3 108473842 108473860 CTAACATTGCTGGGATGGA 59 108473905 108475748 TGTAAACCATTCCCAGAGAC 59 NA Mus musculus 50 Ubap2 ENSMUSG00000028433 ENSMUST00000108068,ENSMUST00000030143,ENSMUST00000108066 2 3 4 80 4 41180741 41182564 GCTAAAGTTAAGCAGCTTATGG 59 41180682 41180703 ATCACCATTACAGTCATGTAGG 59 NA Mus musculus 50 Dock7 ENSMUSG00000028556 ENSMUST00000075836 3 1 5 89 4 98667783 98667801 CTTAGCAACAGTAACCCAG 57 98659138 98667730 TCGATCCATAGCCTTACTG 58 NA Mus musculus 50 Npal3 ENSMUSG00000028803 ENSMUST00000105856,ENSMUST00000063906,ENSMUST00000102549,ENSMUST00000030604 2 4 4 92 4 135027893 135030253 TTTCTCCTGTACATGCTGG 59 135027819 135027837 GAGAATCACAACGATGCTG 58 NA Mus musculus 50 Sh3bgrl3 ENSMUSG00000028843 ENSMUST00000030651,ENSMUST00000105879 1 2 2 93 4 133683700 133683718 TATGAACTCTTCGTGGAGG 58 133683625 133683643 CTAGCTGGATAGGATCGGT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Sh3bgrl3 ENSMUSG00000028843 ENSMUST00000030651 2 1 2 138 4 133683933 133683951 TCCAATACCAGCTAGTGGA 59 133683702 133683721 TCCACGAAGAGTTCATAGTC 58 NA DesignNoJunction Mus musculus 50 Pftk1 ENSMUSG00000028926 ENSMUST00000088858 2 1 5 126 5 5227181 5227201 GAAGGATCTTATGCAACAGTG 59 5184667 5195289 ACAATGTATCTTCCCTGATGG 59 NA Mus musculus 50 Psmc2 ENSMUSG00000028932 ENSMUST00000030769,ENSMUST00000116624 3 2 2 81 5 21301594 21301612 ATTCAAGGCAGATCAAGCA 59 21301654 21302363 GACTCTTTAATACCAGTGAGCT 59 NA Mus musculus 50 Fbxo44 ENSMUSG00000029001 ENSMUST00000057907,ENSMUST00000105704 2 2 3 96 4 147530754 147530773 AATGGAAGGTAGAGGATCTC 57 147530588 147530695 TTGAGGCAGGTGTAATAGG 58 NA Mus musculus 50 Ablim2 ENSMUSG00000029095 ENSMUST00000114205,ENSMUST00000114206,ENSMUST00000101280,ENSMUST00000114204 1 4 7 103 5 36200519 36200537 TAACTCTCCAGACCTGGAC 59 36200601 36217482 TCTTATACTGTGAGTAGAGGCT 59 NA Mus musculus 50 Crmp1 ENSMUSG00000029121 ENSMUST00000114158,ENSMUST00000031004 1 2 3 91 5 37675426 37677614 AGCCATAAATCAACTGTGGA 59 37677668 37677686 AAGACAATCTTGCCCTGAC 59 NA Mus musculus 50 Spp1 ENSMUSG00000029304 ENSMUST00000031243,ENSMUST00000112748,ENSMUST00000112747 1 3 4 80 5 104865583 104866681 CTCAGAGGAGAAGCTTTACAG 59 104866722 104866741 AGATTCTGCTTCTGAGATGG 59 NA Mus musculus 50 Rasl11a ENSMUSG00000029641 ENSMUST00000031646 1 1 1 60 5 147657252 147657271 CTTGACCAAGAGATTCATCG 58 147657416 147657435 GAGTCTCGAATACAGTTTGC 58 NA DesignNoJunction Mus musculus 50 Itpr2 ENSMUSG00000030287 ENSMUST00000111674 1 1 3 80 6 146275769 146309883 CCCATGCATTTGGTTATCAC 59 146275708 146275726 CATGTGTCTCAATGCAGTG 59 NA Mus musculus 50 Mef2a ENSMUSG00000030557 ENSMUST00000032776,ENSMUST00000076325 2 2 4 89 7 74413085 74440273 GGATATCGTTGAGGCTCTG 59 74413014 74413033 TCTGTATGTGGAGTTAGCAC 59 NA Mus musculus 50 Mrpl48 ENSMUSG00000030706 ENSMUST00000107053,ENSMUST00000062093 2 2 2 137 7 107701105 107701123 CATCCTTACCACCCATGAG 59 107697880 107699056 AAGTCTTCTTCAGTGTGCTC 59 NA Mus musculus 50 Il13ra2 ENSMUSG00000031289 ENSMUST00000033646,ENSMUST00000112827 3 2 2 83 X 143829608 143829627 TCAGAGCATTGTACAAATGG 58 143828976 143829563 TTCCAAACTTCCTTCATCTG 57 NA Mus musculus 50 Mtm1 ENSMUSG00000031337 ENSMUST00000061970,ENSMUST00000025391,ENSMUST00000101502 1 3 7 144 X 68549516 68552754 CATATCAAGCTTGTTCTGACC 59 68552860 68552878 AGAAGCTGTCCAACATCAG 59 NA Mus musculus 50 Gabra3 ENSMUSG00000031343 ENSMUST00000114554,ENSMUST00000055966 1 2 2 81 X 69785446 69785467 TCTTCACTAGAATCTTGGATCG 59 69756696 69785404 ACTTCAGTCACTGCATCTC 59 NA Mus musculus 50 Amelx ENSMUSG00000031354 ENSMUST00000112119,ENSMUST00000062820 2 2 5 85 X 165620587 165621839 GCTATGAGAAGTCACATTCTC 58 165620426 165620444 TATCATGCTCTGGTACCAC 58 NA Mus musculus 50 Zfp275 ENSMUSG00000031365 ENSMUST00000114499,ENSMUST00000033731 2 2 2 112 X 70597162 70597180 TGATATTGTACCGTGGCAC 59 70597256 70598186 CAACAGGAACTCCAATGGA 59 NA InUTR Mus musculus 50 Arhgap4 ENSMUSG00000031389 ENSMUST00000114404 3 1 7 98 X 71143346 71143482 TTAATCTCAATGGTGCCCA 58 71143186 71143205 CTAGGTCATGGACAGTACAG 58 NA Mus musculus 50 Prame ENSMUSG00000031411 ENSMUST00000033786,ENSMUST00000113159 1 2 2 84 X 132149035 132149053 GATGAACTGCCTGAAAGAG 58 132148181 132148987 ATTAGGTGGTAAGGCTCTG 58 NA Mus musculus 50 Rdx ENSMUSG00000032050 ENSMUST00000000590 2 1 2 197 9 51877826 51877844 AAGTACAGCAGATGAAGGC 59 51881379 51889132 CTTCTAGTTCTTTCTGGGCT 59 NA Mus musculus 50 Lca5 ENSMUSG00000032258 ENSMUST00000034791 3 1 3 104 9 83292189 83292207 GCTAAGTTCAGTGTTGGGA 59 83289647 83292121 TCTTCTCTTGCCCATTCAC 59 NA Mus musculus 50 Abhd5 ENSMUSG00000032540 ENSMUST00000035128 2 1 2 93 9 122277372 122285034 CCATCAAGGGTTAGTCACC 59 122285090 122285109 TCCAAACTGGAATTGGTCTC 59 NA Mus musculus 50 Ccdc85a ENSMUSG00000032878 ENSMUST00000109501 2 1 4 60 11 28476415 28476433 GATTCATCATCCCATCACC 57 28476373 28476391 CAGCATATACTGACCCACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mif ENSMUSG00000033307 ENSMUST00000038169 3 1 1 79 10 75322471 75322489 ACTACAGTAAGCTGCTGTG 59 75322267 75322288 GTCGTAATAGTTGATGTAGACC 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Hisppd2a ENSMUSG00000033526 ENSMUST00000110627,ENSMUST00000110629,ENSMUST00000110625 1 3 10 81 2 121153432 121153450 CCGAATCTTCAGGACTACG 59 121147517 121153387 ACCCTTCAAATCCATCTCG 59 NA Mus musculus 50 Hisppd2a ENSMUSG00000033526 ENSMUST00000110628,ENSMUST00000052029,ENSMUST00000110624,ENSMUST00000089945,ENSMUST00000110626 1 5 10 80 2 121153432 121153450 CCGAATCTTCAGGACTACG 59 121152640 121153388 AAACAAGAGCTCATCTCGG 59 NA Mus musculus 50 Rbm9 ENSMUSG00000033565 ENSMUST00000096360 1 1 5 88 15 76933359 76963154 CTCTCACGGTGAATAATGC 58 76929903 76929921 TACTGGGCTTAACTTCCAG 58 NA Mus musculus 50 Bai3 ENSMUSG00000033569 ENSMUST00000115223,ENSMUST00000115225,ENSMUST00000041838 2 3 4 89 1 25513935 25517595 CACAACAGATTTACCCAGG 58 25513864 25513882 TTTGAAAGTCCATCATCCC 57 NA Mus musculus 50 Sfxn5 ENSMUSG00000033720 ENSMUST00000045846 3 1 2 80 6 85165731 85179197 GATGTCAGAGATTGAAACCT 57 85165670 85165688 CCCTTATTGTACACCACTG 57 NA Mus musculus 50 Gas2l1 ENSMUSG00000034201 ENSMUST00000037146,ENSMUST00000056649,ENSMUST00000109895 2 3 3 98 11 4963894 4963912 GTCACTGAAATTGCCACTG 59 4962690 4963832 TAGGATCTCCCTTACCAGC 59 NA Mus musculus 50 Loxl2 ENSMUSG00000034205 ENSMUST00000022660,ENSMUST00000100420 3 2 3 81 14 70090010 70090028 ACCGTCATGACATTGACTG 59 70090073 70092134 GGGTTAATGACAACCTGGA 59 NA Mus musculus 50 Exosc1 ENSMUSG00000034321 ENSMUST00000075280 2 1 2 80 19 42005896 42005914 GTGGTGTCAGTGATGAGAG 59 42002592 42005853 GATGCTAGAGACCTTACAGG 58 NA Mus musculus 50 Ankrd12 ENSMUSG00000034647 ENSMUST00000038116,ENSMUST00000086699 2 2 2 90 17 66336821 66373424 GTTATACAGATTCAGAAGAGGC 58 66336752 66336771 CAGACGAAAGAGTCTTTCTC 57 NA Mus musculus 50 Ccdc128 ENSMUSG00000034709 ENSMUST00000038551 3 1 2 81 17 88955060 88957936 TTGAATCAGAAGTTCTCCCA 58 88957980 88957998 CGAATAAGTGCAGCATTCC 59 NA Mus musculus 50 Cobll1 ENSMUSG00000034903 ENSMUST00000112422 3 1 9 184 2 64964355 64970563 ATCTTTCCAAGAGTCCTGC 59 64964099 64964117 GTTTGGAAATGGTGTTGGA 58 NA Mus musculus 50 Mitf ENSMUSG00000035158 ENSMUST00000043637,ENSMUST00000113342,ENSMUST00000101123,ENSMUST00000113339,ENSMUST00000043628 2 5 7 116 6 97946451 97953886 AATGGCAAATACGTTACCC 58 97953966 97953984 TTTATGTTGGGAAGGTTGG 57 NA Mus musculus 50 Tanc1 ENSMUSG00000035168 ENSMUST00000112568,ENSMUST00000037526 2 2 4 85 2 59675264 59677038 GAGCCAAACTAGGAAATGC 58 59677086 59677105 TTCCTCTACCAATTTCTGCA 58 NA Mus musculus 50 Ccdc98 ENSMUSG00000035234 ENSMUST00000055245,ENSMUST00000044535 2 2 2 84 5 101241214 101244191 ATGTCAGAAAGACTGTGGT 58 101241148 101241166 CTGTGGAGTAACTGCTCTC 59 NA Mus musculus 50 Pet2 ENSMUSG00000035395 ENSMUST00000113959,ENSMUST00000113960 1 2 3 85 X 86653381 86653493 AGTTACCTGAAGAGGTTTCTC 59 86653316 86653334 GACACAGGAGAAGAACCAC 59 NA InUTR Mus musculus 50 Wdr32 ENSMUSG00000035572 ENSMUST00000107798 3 1 2 89 4 45385638 45385805 AACGAGAAGGAGTTTCACC 59 45385857 45385876 AGGAAGTGATACAGTTTCCC 59 NA Mus musculus 50 Melk ENSMUSG00000035683 ENSMUST00000045607,ENSMUST00000102933,ENSMUST00000107828 1 3 3 97 4 44325041 44325059 CAAGGACTACCATCTGCAG 59 44325120 44330905 AAACATCTGCCTCTGATCC 59 NA Mus musculus 50 Slc17a2 ENSMUSG00000036110 ENSMUST00000006786,ENSMUST00000099697 1 2 2 88 13 23909469 23910897 CATCTTTGGTAGCATTGGC 59 23910949 23910967 TCACACTTATGCATGGGTG 59 NA Mus musculus 50 Qsox2 ENSMUSG00000036327 ENSMUST00000036187 3 1 3 81 2 26066840 26066859 TCCTGAAACAGCACTATAGC 59 26065298 26066796 GCTCTCAGAACTGATCCAG 59 NA Mus musculus 50 March1 ENSMUSG00000036469 ENSMUST00000110258,ENSMUST00000110259,ENSMUST00000098708,ENSMUST00000072482,ENSMUST00000110253 1 5 7 91 8 68980086 68992135 AGGTAACGACAATGGTGTG 59 68992188 68992208 CATACATGAAGACGAGACCTC 59 NA Nonspecific Mus musculus 50 6430550H21Rik ENSMUSG00000036502 ENSMUST00000089056 2 1 3 97 X 35550465 35561195 GACTTTCAGGTATTCTCGTG 57 35550387 35550405 GTTTCTTGAACCATTGCAG 57 NA Mus musculus 50 Etl4 ENSMUSG00000036617 ENSMUST00000114627,ENSMUST00000114620,ENSMUST00000114619,ENSMUST00000045555,ENSMUST00000114614,ENSMUST00000114609,ENSMUST00000066509,ENSMUST00000114607,ENSMUST00000114608,ENSMUST00000114606 3 10 12 193 2 20719650 20720252 ATGTCTAAGGTGAGCAGTG 58 20720409 20723185 GAACACTTCTGGAATGCCT 59 NA Mus musculus 50 Tmem188 ENSMUSG00000036810 ENSMUST00000098526 2 1 2 80 8 90643683 90643702 CAAGGCTTTCGAAAGAAGAC 59 90643745 90653606 TGAAGAAGGACACTTCTCC 58 NA Mus musculus 50 Gtdc1 ENSMUSG00000036890 ENSMUST00000112813 3 1 5 84 2 44680928 44680946 CAAAGAAATGGCACTGGAG 59 44490828 44680880 GGCATGAATCTGTAGTGCT 59 NA Mus musculus 50 Tbkbp1 ENSMUSG00000038517 ENSMUST00000092755,ENSMUST00000107615,ENSMUST00000107614,ENSMUST00000066078 2 4 5 98 11 96998979 96999943 CCATCAACCTACTGATGGA 58 96998899 96998917 TGATGAGAGCATCATCTGG 58 NA Mus musculus 50 BC028528 ENSMUSG00000038543 ENSMUST00000090476 1 1 2 80 3 95692115 95692133 TCAGAATCCTGTAACCACG 58 95688984 95692071 TTTGGACTCTGTGGTTCTG 59 NA Mus musculus 50 Dock10 ENSMUSG00000038608 ENSMUST00000077946 3 1 3 137 1 80525230 80525248 ATTGCAGAATACCTGAAGC 57 80522892 80524813 CATAGAGAACATGCTTCCTC 57 NA Mus musculus 50 1110039B18Rik ENSMUSG00000038828 ENSMUST00000046349 2 1 2 116 5 31173936 31174106 TCCACATGATTATCCCTACAG 58 31174184 31174202 ATGGTGAATAGACAGTGGT 57 NA Mus musculus 50 Foxk2 ENSMUSG00000039275 ENSMUST00000106114,ENSMUST00000038442,ENSMUST00000106113 2 3 3 82 11 121149323 121149341 CCTCAGTTTAATGGCTGAC 58 121149387 121152070 GCTTTGAGTCATCCTTTGG 58 NA Mus musculus 50 Exosc2 ENSMUSG00000039356 ENSMUST00000038474,ENSMUST00000113464 2 2 2 80 2 31532242 31533975 CTGAAATATGGGAAGCTAGG 57 31534017 31534036 ATGGAAATGAGTCTTCTGTC 57 NA Mus musculus 50 Znfx1 ENSMUSG00000039501 ENSMUST00000048988 1 1 2 80 2 166874073 166875823 TTTCTGGAAGGCATCTACG 59 166874011 166874029 CTGCTTCAGGATTTCACTG 58 NA Mus musculus 50 Ncoa7 ENSMUSG00000039697 ENSMUST00000068567 1 1 4 80 10 30421829 30424421 ACCATGGAATACACTGCTG 59 30421767 30421788 CACTAATTTATTGGGAGTGACG 59 NA Mus musculus 50 Alkbh3 ENSMUSG00000040174 ENSMUST00000111240,ENSMUST00000040005 1 2 2 80 2 93844931 93847015 CAGAGTGATTGACAGGGAG 59 93843293 93843312 AAGCCAGGATATAAGCACAC 59 NA Mus musculus 50 2900008C10Rik ENSMUSG00000040363 ENSMUST00000115513,ENSMUST00000115512,ENSMUST00000065143,ENSMUST00000043441 1 4 4 81 X 11624603 11624621 CTTGATACCTCAGGAGTCC 58 11624231 11624559 CACAGTCATCTTAGTGTCAG 57 NA Mus musculus 50 Ckap5 ENSMUSG00000040549 ENSMUST00000099716,ENSMUST00000111337 2 2 4 94 2 91441273 91447610 CTCTGACACAGCTATTTCAG 57 91447666 91447685 CAGCATTAAGGTGATCAGTC 58 NA Mus musculus 50 Phc1 ENSMUSG00000040669 ENSMUST00000079560 3 1 3 100 6 122282610 122282629 CTCATCCTGATGCCTAATGG 59 122275958 122282547 AAGTTCTGCACCTGATCTG 59 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000111371,ENSMUST00000099723,ENSMUST00000111375,ENSMUST00000077941,ENSMUST00000111381,ENSMUST00000099725 1 6 17 81 2 91005574 91005592 AGTCTTTCAAACCTCACAC 57 91004168 91005530 TTAGCCCAAATACTTTCAGG 57 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000111370,ENSMUST00000099723,ENSMUST00000077941,ENSMUST00000066473,ENSMUST00000099725 1 5 17 183 2 91000519 91002194 GCATCTGTTGAATTGTGGA 58 90998627 90998645 CAGAGTCTTGATCAGTCCT 57 NA Mus musculus 50 Zmynd15 ENSMUSG00000040829 ENSMUST00000108563,ENSMUST00000039093,ENSMUST00000108564,ENSMUST00000092958 2 4 4 80 11 70276174 70276950 CCTATACTGCAGAAGTTACCAG 59 70276991 70277009 TCCAATAACCACGAGTGAG 58 NA Mus musculus 50 Zmynd15 ENSMUSG00000040829 ENSMUST00000108563,ENSMUST00000039093 2 2 4 90 11 70274628 70275290 AAGGACAGAAGAATGCAGAG 59 70275343 70275361 AGATCAATGCCCAAGATGG 59 NA Mus musculus 50 Rfx3 ENSMUSG00000040929 ENSMUST00000046898,ENSMUST00000099533 3 2 3 80 19 27861149 27861170 GTTCTACTTAGTAGAGCATCGT 59 27845148 27861109 TTTAAATCGCCAAACTCACC 59 NA Mus musculus 50 Pla2g5 ENSMUSG00000041193 ENSMUST00000030524 1 1 4 80 4 138356449 138356469 AACTTCCTCCTAATGTCCG 58 138356387 138356405 ATCAGGAATACAGCAGAGG 58 NA Mus musculus 50 Slc16a6 ENSMUSG00000041920 ENSMUST00000070152,ENSMUST00000070872 1 2 2 104 11 109319861 109319879 TCTGTCGCAGTACTTTGAC 59 109316977 109319793 TTCAGAGCTGTGATAGCTG 59 NA Mus musculus 50 Myo3b ENSMUSG00000042064 ENSMUST00000100044 1 1 5 94 2 70168913 70168933 AATACTGTCCAGATTCAGGAG 58 70168989 70263640 TTCTTCGGAACCATCTGTG 59 NA Mus musculus 50 Jarid1b ENSMUSG00000042207 ENSMUST00000112198,ENSMUST00000047714 2 2 3 80 1 136525262 136525282 TACTTACTAAGCCAAGCTCTG 59 136525324 136527022 GAAGGCAATCGTTCTTCTC 58 NA Mus musculus 50 Nxt2 ENSMUSG00000042271 ENSMUST00000112916,ENSMUST00000042329,ENSMUST00000112914,ENSMUST00000112913 3 4 4 99 X 138671464 138672199 AGTTCATGAGCAAGCTACC 59 138672260 138672280 GTTCTGGTTAAAGAAGTGCTG 59 NA Mus musculus 50 Specc1 ENSMUSG00000042331 ENSMUST00000049836,ENSMUST00000108709 3 2 3 80 11 61856506 61856524 CGAGACTGAAGAAGACCTC 59 61856568 61931210 GAATAGTCCCTGTGTTGCT 59 NA Mus musculus 50 Mum1l1 ENSMUSG00000042515 ENSMUST00000113045,ENSMUST00000113043,ENSMUST00000046931,ENSMUST00000113042,ENSMUST00000113041 2 5 6 95 X 135768377 135769049 GACAGAGGTATCTTCCAGAG 58 135769107 135769125 TTTATGGCTTATGTGCACC 58 NA InUTR Mus musculus 50 Ubap2l ENSMUSG00000042520 ENSMUST00000029553,ENSMUST00000064639,ENSMUST00000090908 1 3 5 137 3 89835290 89838002 CCAGATGATGGAACAAGAC 57 89830592 89832259 CTCAGAAAGATCTTCATTCCAG 58 NA Mus musculus 50 Flad1 ENSMUSG00000042642 ENSMUST00000050398,ENSMUST00000107426,ENSMUST00000107429 3 3 3 80 3 89209827 89209846 AGATCCTGTACATTCGTAGC 58 89209682 89209787 GGAGATTATACCTCTTGATGGT 58 NA Mus musculus 50 Fgf11 ENSMUSG00000042826 ENSMUST00000011285,ENSMUST00000108637,ENSMUST00000102585 1 3 3 207 11 69615002 69615020 GTCACTTTGCCAGAAACAG 59 69612947 69613175 ATTGAAGTGGGTGAAGGAG 59 NA DesignRelaxed Mus musculus 50 Pyhin1 ENSMUSG00000043263 ENSMUST00000056071,ENSMUST00000116489 2 2 2 81 1 175574902 175574920 TGCTTTAAACTGATCCCAG 57 175574964 175576137 TCTTAGCTTTGATAACCTGC 57 NA Mus musculus 50 Gpr4 ENSMUSG00000044317 ENSMUST00000060225,ENSMUST00000108469 2 2 2 72 7 19807678 19807696 ATGAACTTGAGCATTGCAG 58 19807732 19807750 CATGGTGGAGGAAGTAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trim39 ENSMUSG00000045409 ENSMUST00000042717,ENSMUST00000113706,ENSMUST00000113704 2 3 4 81 17 36405604 36405623 ATGTGCAATTTCTCATACCC 58 36404154 36405563 CTGAAGTTTCTCCTTGTATTCC 58 NA Mus musculus 50 Trim39 ENSMUSG00000045409 ENSMUST00000042717,ENSMUST00000113706 2 2 4 100 17 36397863 36398451 CTTAAACAGCTAATTGCGGA 58 36397782 36397801 CTTGTCTCCACAAACTTGAC 58 NA Mus musculus 50 A830006F12Rik ENSMUSG00000045648 ENSMUST00000053922,ENSMUST00000113937 1 2 2 82 1 70775669 70775688 GTCCCGAATGTAAAGAAGTG 58 70775733 70797519 TGGAGAGGGCTTAAATTCC 58 NA Mus musculus 50 Gpr158 ENSMUSG00000045967 ENSMUST00000055946,ENSMUST00000102949 1 2 2 80 2 21320988 21321006 ATTGACCAATGTTCGAGTG 58 21321049 21474940 TTTGATTGGCATACACTCTG 58 NA Mus musculus 50 Eif4g1 ENSMUSG00000045983 ENSMUST00000115463,ENSMUST00000044783,ENSMUST00000073840,ENSMUST00000115457,ENSMUST00000115461,ENSMUST00000115460 2 6 6 80 16 20689114 20689274 CTGCAATTATCTTTGAGACTCC 59 20689315 20689333 ACAGGTATTTCTGCAGCAG 59 NA Mus musculus 50 Clec9a ENSMUSG00000046080 ENSMUST00000088075 2 1 2 88 6 129365300 129365318 ATTGGTGAACCTTACACAG 57 129365370 129369508 AGTCACTACCTGAATGGAG 57 NA Mus musculus 50 Vps13a ENSMUSG00000046230 ENSMUST00000068156,ENSMUST00000112873 2 2 3 80 19 16785422 16789549 TACTGAAGATGACTCAGAGGA 59 16785362 16785381 TCTCTACATGACACTTGAGG 58 NA Mus musculus 50 Zfp322a ENSMUSG00000046351 ENSMUST00000110436 1 1 3 191 13 23449573 23454457 TTACAGAAGGTTTGGAGGT 58 23449400 23449421 GTGTACATCTTCTATGGTTCTC 58 NA InUTR Mus musculus 50 Mrps7 ENSMUSG00000046756 ENSMUST00000058109,ENSMUST00000116321 2 2 2 99 11 115466136 115466154 AGAAGTATGACCAGGAGCT 59 115466217 115466345 GTGAATTTGCTGATGACCG 59 NA Mus musculus 50 Dmbt1 ENSMUSG00000047517 ENSMUST00000084509 3 1 2 81 7 138178214 138184412 CACAGATGGAACAGATTCTG 58 138184456 138184474 GTAAAGGATCTCCACTCGA 58 NA Mus musculus 50 Olfr736 ENSMUSG00000047716 ENSMUST00000058965 2 1 1 60 14 51012850 51012868 ACTATGTTCTGTGGCAACC 59 51012892 51012910 TAAGAAACCAGAGGAACCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxo40 ENSMUSG00000047746 ENSMUST00000075869,ENSMUST00000114806 3 2 2 114 16 36966366 36968925 AGTCCACAATCAGATCTGG 58 36966270 36966288 CACGATGTTGAAAGGACAG 58 NA Mus musculus 50 Zfp473 ENSMUSG00000048012 ENSMUST00000060270 2 1 2 109 7 51990005 51993343 CAGTACTGAAGTGCCTGAG 59 51989914 51989932 CTTCAAAGTTGAGTTGCCC 59 NA Mus musculus 50 Tprg ENSMUSG00000048399 ENSMUST00000056087 2 1 1 80 16 25328430 25357036 CTCCTGACAGAGATTGATCAC 59 25357078 25357096 TTTGCAGATCAAGAGGGTC 59 NA Mus musculus 50 Nkx1-2 ENSMUSG00000048528 ENSMUST00000106174 2 1 3 61 7 139789969 139789987 CCGGACAAATCTGAAACTC 58 139789187 139789205 CGAAACTTGTTCTCTAGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Sp8 ENSMUSG00000048562 ENSMUST00000095338,ENSMUST00000063918 3 2 2 65 12 120086897 120086915 ACCTGTAATAAGATCGGCA 58 120086944 120086962 GAAGGAAGAAGAGCTGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nog ENSMUSG00000048616 ENSMUST00000061728 3 1 1 68 11 89163234 89163252 AGCACTATCTACACATCCG 58 89163184 89163202 CTGGATGTTCGATGAGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Centb2 ENSMUSG00000049076 ENSMUST00000100008 2 1 2 116 16 31154747 31154765 GTATCGCGATGATTGACAC 58 31141874 31154669 CAAACAGAATCTCAACCACAG 59 NA Mus musculus 50 Zfp260 ENSMUSG00000049421 ENSMUST00000050735 1 1 2 60 7 30884720 30884738 GAGAAGCAGCATCAATCTG 58 30889269 30889287 TCCTGTGTCCTTATCTGTG 58 NA DesignNoJunction, InUTR Mus musculus 50 Akap4 ENSMUSG00000050089 ENSMUST00000057101,ENSMUST00000115750,ENSMUST00000115751 2 3 3 88 X 6654941 6655396 CAACTAGAGAAGCTCCCTG 59 6655448 6655466 GCAAACTTCATGACCTCCT 59 NA Mus musculus 50 Vwc2 ENSMUSG00000050830 ENSMUST00000109681,ENSMUST00000056344 2 2 2 119 11 11016598 11054172 GAGGAGTTTGTGGTGTCTC 59 11054254 11054273 CTGATCAGGCTCATATACGG 59 NA Mus musculus 50 Bre ENSMUSG00000052139 ENSMUST00000114514,ENSMUST00000080598 3 2 7 93 5 32004271 32004289 TTCATATCAAGCGTGGTCC 59 32004345 32033353 TCAATGATGTACAGCCAGAC 59 NA Nonspecific Mus musculus 50 Trpm3 ENSMUSG00000052387 ENSMUST00000074770,ENSMUST00000099564 1 2 7 109 19 22972208 22972226 GTGATCGAGTACCTGATGG 59 22972298 22975552 CTCAAGGGAATATCATCCCT 58 NA Nonspecific Mus musculus 50 4930473A06Rik ENSMUSG00000052407 ENSMUST00000053414 1 1 3 80 4 83192809 83192827 TCAGAAAGAAGCTCCATCG 59 83192871 83195522 TCTCATAGCTTGACAGCTC 58 NA Mus musculus 50 Nav2 ENSMUSG00000052512 ENSMUST00000107611 2 1 5 131 7 56559926 56617483 CTGATCTACACGGATTGGG 59 56617576 56627697 CTTGTCATTTGCTACAACCTG 59 NA Mus musculus 50 Dnahc6 ENSMUSG00000052861 ENSMUST00000114040,ENSMUST00000064948 1 2 2 80 6 72988818 72991018 TCACGGATCCAAATCAGAC 59 72988756 72988774 CTGTCACAGGAAATGTGGA 59 NA Mus musculus 50 Jmjd2d ENSMUSG00000053914 ENSMUST00000115647,ENSMUST00000058796,ENSMUST00000115648 2 3 3 60 9 14267540 14267561 GGAGACTTAATAGTCGACTCAG 59 14267501 14267519 AAGCTGTCATAAGATGCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cyhr1 ENSMUSG00000053929 ENSMUST00000089514 2 1 3 70 15 76478529 76478547 GAGAAGATCGGCTACACAG 59 76478147 76478165 ATGGAATGCTCTTCTTGCT 59 NA DesignNoJunction Mus musculus 50 Tprkb ENSMUSG00000054226 ENSMUST00000113753,ENSMUST00000113752,ENSMUST00000067137,ENSMUST00000089570 2 4 4 154 6 85874509 85877245 CCAATGTGATTGTCGATCC 58 85877806 85877825 AAATTTCTTCAAGGCCTCTG 58 NA Mus musculus 50 Lrrc36 ENSMUSG00000054320 ENSMUST00000109355 3 1 2 84 8 107949272 107950665 CACTAGTCTAAAGGGAATCCA 58 107950711 107950729 CACCTCCACTAATGAAGGA 58 NA Mus musculus 50 BC050078 ENSMUSG00000054519 ENSMUST00000108770,ENSMUST00000057799 2 2 2 87 11 59278562 59278960 TTCTATAGAGAAAGGGTGGGA 59 59277770 59277788 AGAGTTGGCTATGATGTGC 59 NA Mus musculus 50 MGI:98976 ENSMUSG00000054626 ENSMUST00000067782,ENSMUST00000114814,ENSMUST00000114810,ENSMUST00000067763 1 4 4 133 X 51098672 51098960 GGAGATACACGATCTCCAG 58 51091090 51091109 TCTAATTTCACGTTGCTGTC 58 NA Mus musculus 50 Rnd1 ENSMUSG00000054855 ENSMUST00000109149,ENSMUST00000003451 2 2 2 80 15 98506962 98506980 ATTACACAGCCTGTTTGGA 59 98504369 98506920 TGTCATAGTAAGGAGAACCTG 58 NA Mus musculus 50 Ntrk2 ENSMUSG00000055254 ENSMUST00000109839 3 1 5 82 13 58910290 58948067 CATCACGGAAATGATCCTG 58 58948112 58948131 ATTTAGTCTCCTGGAGAGTC 57 NA Mus musculus 50 Fut9 ENSMUSG00000055373 ENSMUST00000084770 3 1 2 73 4 25636200 25636219 TAGTTCAGCACTCATCTCTG 58 25547939 25547957 GCCTTTGGATGTTGATGTC 59 NA DesignNoJunction, InUTR Mus musculus 50 OTTMUSG00000015868 ENSMUSG00000055494 ENSMUST00000069111 3 1 1 90 2 156401209 156401227 TTAAAGGCATCCATCACCA 58 156401281 156401299 ATTTCCAGTGTCACAAAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pla2g4a ENSMUSG00000056220 ENSMUST00000070200,ENSMUST00000111926 1 2 2 80 1 151727171 151727189 TGAAGGCACTGTATGAGTC 58 151719880 151727127 TTGACATGTACCATGTGGA 58 NA Mus musculus 50 Lrrc48 ENSMUSG00000056598 ENSMUST00000094140,ENSMUST00000070805,ENSMUST00000108723,ENSMUST00000108722 2 4 4 90 11 60178527 60183984 TGATGAATATCATCTACCTGCG 59 60184036 60184054 CATCTTGTACTCCTCTGCC 59 NA Mus musculus 50 Dsg3 ENSMUSG00000056632 ENSMUST00000115842 3 1 2 81 18 20698327 20698346 CCCTAAAGACAGTGGTTCTG 59 20698388 20702537 GAGGTACTGTCTGTTAGAACC 59 NA Mus musculus 50 Btnl4 ENSMUSG00000058435 ENSMUST00000065841 1 1 3 62 17 34609540 34609558 GATGATGCTCTGAGGACTG 59 34609209 34609227 GTAAGCTGCTTTCCTTCGA 59 NA DesignNoJunction Mus musculus 50 Fbxo18 ENSMUSG00000058594 ENSMUST00000114808 3 1 4 154 2 11679106 11679124 CATTTGGTGCAAGAATAGC 57 11677396 11678239 TCATGATAGCATCATGTGTC 57 NA Mus musculus 50 Pclo ENSMUSG00000061601 ENSMUST00000071768 3 1 3 80 5 14680011 14680030 CAGGTCAGTATGATGTAGCC 59 14680072 14680095 AGGGATACTGTTCTGAAACG 59 NA Mus musculus 50 Kalrn ENSMUSG00000061751 ENSMUST00000076810,ENSMUST00000074924,ENSMUST00000114968,ENSMUST00000114961,ENSMUST00000089655,ENSMUST00000114960,ENSMUST00000114957 3 7 13 99 16 34314435 34332217 ACTCCATGAATGCCTATGTC 59 34314355 34314374 GAGATCTGCTTGATTTGCTG 59 NA Mus musculus 50 Inadl ENSMUSG00000061859 ENSMUST00000041284,ENSMUST00000107035,ENSMUST00000107034,ENSMUST00000107029 3 4 10 95 4 98122945 98131732 AACTTCTTGAGGTCAACGG 59 98131791 98131809 AGACCAAGGTAAATGGTGG 59 NA Mus musculus 50 Btbd3 ENSMUSG00000062098 ENSMUST00000091556,ENSMUST00000075410 2 2 2 122 2 138104971 138104989 CTTTATCCCACCATCCGAG 59 138105566 138106117 GAGGACGTATTTGTGTCCT 58 NA Mus musculus 50 Unc13c ENSMUSG00000062151 ENSMUST00000075245,ENSMUST00000093818 1 2 2 80 9 73328956 73331438 GAAACCTTCCAGTTCATTCTG 59 73328896 73328915 AAAGCAGTAGTCCTTAACCG 59 NA Mus musculus 50 Ica1 ENSMUSG00000062995 ENSMUST00000115520,ENSMUST00000038403 3 2 3 98 6 8603684 8606373 CTGCTTATAAGACTGAAGAGG 57 8603512 8603533 CGTCTAATAGTTCATCTATGGG 57 NA Mus musculus 50 Krr1 ENSMUSG00000063334 ENSMUST00000075924 2 1 2 90 10 111420036 111420054 CTCTTACAAAGAGGCAGGA 58 111420108 111421607 GTTTCGGTAGAAGCTTCCT 59 NA Mus musculus 50 Krr1 ENSMUSG00000063334 ENSMUST00000099281 2 1 2 81 10 111420102 111421603 AGCCAAATAAACTTCTACCG 57 111421647 111421665 CAGTTTCTTCGTCTTTGCT 58 NA Mus musculus 50 Nupl1 ENSMUSG00000063895 ENSMUST00000111241,ENSMUST00000041905 2 2 2 80 14 60853113 60853133 CCGAAATAGCTTTAAGAACCC 59 60851489 60853074 ATATTCTGAAGTAGTCAGCAGG 59 NA Mus musculus 50 Slco1a5 ENSMUSG00000063975 ENSMUST00000081380,ENSMUST00000111825,ENSMUST00000111822 2 3 3 128 6 142214913 142214932 TACTCGTGAGTTACTTTGGA 58 142211235 142214822 TTTCATATTCGTATCGGCC 57 NA Mus musculus 50 Cd209b ENSMUSG00000065987 ENSMUST00000084086,ENSMUST00000084085 2 2 3 80 8 3918821 3919962 CTCTGTCATCCAGATTCCAG 59 3918760 3918778 CAGCAAATTCGACACAGTC 59 NA Mus musculus 50 Iqcf1 ENSMUSG00000066383 ENSMUST00000085114 3 1 1 71 9 106402912 106402930 CTCAGAAACAGAGAAGGCA 59 106404158 106404177 TGGATCTTTACAACTTGGTC 57 NA DesignNoJunction Mus musculus 50 Clec16a ENSMUSG00000068663 ENSMUST00000115827,ENSMUST00000038145 3 2 6 80 16 10596061 10596079 ACGCTGAGAAGACTAAAGG 59 10596121 10611110 TCACCATCTCAATCTCTTCAC 59 NA Nonspecific Mus musculus 50 1700049G17Rik ENSMUSG00000070709 ENSMUST00000098639 1 1 3 188 7 28714416 28714434 TTTGCTGGTGATAACTGCA 59 28705800 28712423 AAATGCAACTTCCCAACAG 58 NA InUTR Mus musculus 50 Gm1673 ENSMUSG00000070858 ENSMUST00000114384,ENSMUST00000114383,ENSMUST00000094869,ENSMUST00000114382 1 4 4 138 5 34326725 34326743 CATTTGAATTCATGCAGCG 58 34327602 34327620 AAAGATCTTCAGCGTCCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Ggh ENSMUSG00000073987 ENSMUST00000029904 1 1 2 87 4 19968884 19969369 GTAGGTTTGCTACTATGCG 57 19969420 19973358 TTACTACTCCGATGATGGG 57 NA Mus musculus 50 Defb28 ENSMUSG00000074679 ENSMUST00000099204 2 1 1 155 2 152344059 152344077 CTTAGCTGTCCTTGTGGTC 59 152345850 152345869 TTTGTTTCTCTGAGACAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pde11a ENSMUSG00000075270 ENSMUST00000111947 1 1 3 61 2 75844039 75844057 TTATTTCCGATGTGGACAG 57 75829302 75829320 AATCCAGCATTGGTTTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC062127 ENSMUSG00000078437 ENSMUST00000105316 2 1 1 60 10 81208888 81208906 AGGTAATCTTCAAACGCAC 58 81208846 81208864 TTCATGGCAGCAATAAGGT 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A2AGY4_MOUSE ENSMUSG00000078503 ENSMUST00000066794,ENSMUST00000105742,ENSMUST00000105741 1 3 3 99 4 145120806 145124724 AAATACACCACAGGGTCTG 59 145124786 145124805 CATGTACAGTCTCCTCTGAG 58 NA Mus musculus 50 LOC100043857 ENSMUSG00000078759 ENSMUST00000108097 1 1 1 69 7 32498040 32498059 AGGAAGACAAGATACATGCA 58 32498867 32498885 TGTAGCCATCAACATAGCG 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Etohi1 ENSMUSG00000078866 ENSMUST00000108952,ENSMUST00000108949 2 2 3 113 2 177258375 177259542 TCATGGAAGGTATGAAAGACG 59 177259614 177259635 CCATTGTGTATTCTTACATGCC 59 NA Mus musculus 50 0610010B08Rik ENSMUSG00000078870 ENSMUST00000108965,ENSMUST00000099003,ENSMUST00000108964 1 3 3 80 2 176980453 176980472 ATCCTTCTCAGAAGAGTCTC 57 176980187 176980413 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 0610010B08Rik ENSMUSG00000078888 ENSMUST00000109016 2 1 3 70 2 175749387 175751083 CTTTAGAACATGCAGTGGC 59 175751114 175751135 GCCAATATTCATAGGGTTTCTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000068790 ENSMUSG00000079354 ENSMUST00000112595,ENSMUST00000112594,ENSMUST00000112593 3 3 3 87 14 20386879 20387573 TCCTACAGCATTAAGGAGG 58 20386810 20386828 GCCTTCTGTTCTCATTCAG 58 NA Nonspecific Mus musculus 50 Gfra4 ENSMUSG00000027316 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 NM_007679.4 ENSMUSG00000071637 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 TRAJ8 ENSMUSG00000076920 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Scnn1g ENSMUSG00000000216 ENSMUST00000000221 3 1 1 82 7 128890196 128890214 TACCCTTTCATCGAAGACG 59 128890260 128903918 TTGAAGGATTCTGTCAGGT 58 NA Mus musculus 50 Itgb2 ENSMUSG00000000290 ENSMUST00000000299 3 1 1 80 10 77023946 77027386 TGGAGGACAGTCTAGAGTG 59 77027429 77027448 CAATCAGTACGACACCTACC 59 NA Mus musculus 50 Zfp385a ENSMUSG00000000552 ENSMUST00000087898 2 1 1 116 15 103150825 103163507 AACTACAGCACAATGGACC 59 103150727 103150745 ATTGAAGCGGATCTGACAG 59 NA Mus musculus 50 1500035H01Rik ENSMUSG00000002031 ENSMUST00000002099 1 1 1 126 9 44581827 44581845 AGAGGTTGCCAGTATTAGC 59 44586709 44590191 CTTCTTCTCCTTATTGTCCTCC 59 NA InUTR Mus musculus 50 1500002O20Rik ENSMUSG00000002210 ENSMUST00000002280 1 1 1 188 7 25202014 25205039 CAGTCTGTACAGGTTCCTG 59 25205646 25205664 ATCATCAGGTGCATCTGAC 59 NA Mus musculus 50 Nr2f6 ENSMUSG00000002393 ENSMUST00000002466 3 1 1 76 8 73904922 73904940 CAAGAGTTTCTTCAAGCGC 59 73902357 73902375 GATCAATCTGACAGTCACG 57 NA DesignNoJunctionSingleExon Mus musculus 50 4930455C21Rik ENSMUSG00000002846 ENSMUST00000002925,ENSMUST00000114734 3 2 2 112 16 38499155 38502657 GAAGAGTGGAGAAGCAGTC 59 38499061 38499079 CTTAGCAGCTCCTCAATCC 59 NA Mus musculus 50 Slc25a1 ENSMUSG00000003528 ENSMUST00000003622 3 1 1 89 16 17927308 17927326 GCAGGAGAGGACTATTGTG 59 17926824 17927256 TGAACTTCACCTTGATGGTC 59 NA Mus musculus 50 Sst ENSMUSG00000004366 ENSMUST00000004480 3 1 1 96 16 23890713 23890731 TTTCTGCAGAAGTCTCTGG 59 23889970 23889988 CATTCTCTGTCTGGTTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dlst ENSMUSG00000004789 ENSMUST00000053811 2 1 1 80 12 86459483 86459502 ATGTGATAACAGTCCAAACC 57 86459545 86459743 CATCTCCAACAGCTTTCTC 58 NA Mus musculus 50 Zp3 ENSMUSG00000004948 ENSMUST00000005073 1 1 1 80 5 136463202 136463345 CAAGACTTCCCAGAGTTGG 59 136463387 136463407 GAATTACTACAGTTGCCATGG 59 NA Mus musculus 50 Il27ra ENSMUSG00000005465 ENSMUST00000005601 2 1 1 109 8 86564981 86565996 AGTCAGAAATACCATCCCA 57 86564890 86564908 CAGATGAGGAGTTTGTCAG 57 NA Mus musculus 50 Pcyt1a ENSMUSG00000005615 ENSMUST00000079791,ENSMUST00000115140 2 2 2 287 16 32462191 32463122 CTAATTGTGGGAGTCTGCA 59 32467188 32467207 TGATGTGGAGATACCTTCTG 58 NA DesignRelaxed Mus musculus 50 Trap1 ENSMUSG00000005981 ENSMUST00000006137 3 1 1 80 16 4045578 4045894 CAGAAACATACTGAGGTGC 58 4045516 4045534 CTTCTTGTCAAACTCCCTC 57 NA Mus musculus 50 Fblim1 ENSMUSG00000006219 ENSMUST00000105785,ENSMUST00000105784,ENSMUST00000006381 2 3 3 102 4 141137005 141138979 GATTTCTACAGGAAATTTGCCC 59 141136924 141136942 AATTCCTTCCCATGCACTC 59 NA Mus musculus 50 Msh5 ENSMUSG00000007035 ENSMUST00000097338,ENSMUST00000007250 2 2 2 94 17 35176208 35176227 CATTCAGTTCTTCCTGATGC 58 35175401 35176151 GTTTCAGAATCAGAGGCAC 58 NA Mus musculus 50 Khsrp ENSMUSG00000007670 ENSMUST00000007814,ENSMUST00000065744 3 2 2 91 17 57164495 57164742 TACAAAGTACAGCAAGCCT 58 57164422 57164440 CGAGATCCGTATTCATTGC 58 NA Mus musculus 50 Herpud2 ENSMUSG00000008429 ENSMUST00000008573 2 1 1 86 9 24929368 24929386 AGACAACGTACCCTTTCAC 59 24918372 24929318 CTGGTGATCCACATTTCCT 59 NA Mus musculus 50 Elavl2 ENSMUSG00000008489 ENSMUST00000107120,ENSMUST00000107111,ENSMUST00000107109,ENSMUST00000107118,ENSMUST00000084426,ENSMUST00000107110,ENSMUST00000107116,ENSMUST00000102799,ENSMUST00000078179,ENSMUST00000008633,ENSMUST00000107124,ENSMUST00000107114,ENSMUST00000107113 2 13 13 122 4 90930777 90930795 AAACTTATACGTCAGCGGG 59 90927668 90930691 CTTGATATGCCAGTGACCT 59 NA Mus musculus 50 Fpgs ENSMUSG00000009566 ENSMUST00000113253,ENSMUST00000028148 2 2 2 101 2 32547980 32547998 TATTCATGTCACTGGGACC 58 32543546 32546719 TGAGGAGAGCTAAAGAAGC 58 NA Mus musculus 50 Vav2 ENSMUSG00000009621 ENSMUST00000056176,ENSMUST00000009765 2 2 2 80 2 27137472 27137492 GATACCTGTGTACCAGATGTG 59 27134719 27137430 CAGGTGAACTCATCTTGCA 59 NA Mus musculus 50 1700027A23Rik ENSMUSG00000010136 ENSMUST00000010280,ENSMUST00000066319 2 2 2 91 3 105803349 105803367 CTATCGAAAGTCCCAACCA 58 105802563 105803294 TATGGTGTCACATCCTTGC 59 NA Mus musculus 50 Asz1 ENSMUSG00000010796 ENSMUST00000010940 2 1 1 80 6 18001398 18004541 AGTTGATTCAGAAGATGCAG 57 18001337 18001355 TCTTCCATGTAGAGACCTC 57 NA Mus musculus 50 Cacnb4 ENSMUSG00000017412 ENSMUST00000078324,ENSMUST00000102760,ENSMUST00000102761 3 3 3 81 2 52290262 52292416 CTGGATTACAGAGTCAGCG 59 52290199 52290217 GAGGTCATTAGGCTTCGTC 59 NA Mus musculus 50 Birc5 ENSMUSG00000017716 ENSMUST00000081387,ENSMUST00000093906 1 2 3 82 11 117711165 117713982 ATGACAACCCGATAGAGGA 59 117714027 117714046 GGTTAGTTCTTCCATCTGCT 59 NA Mus musculus 50 Slc25a39 ENSMUSG00000018677 ENSMUST00000107098 2 1 2 142 11 102267110 102267531 CCTACACCAAATGGAAGTG 58 102266373 102266391 CACAATCTTCACAAAGGCA 58 NA Mus musculus 50 Fxr2 ENSMUSG00000018765 ENSMUST00000108655,ENSMUST00000018909 3 2 2 83 11 69465159 69465177 GAAGACAGGACTGTCATGG 59 69465223 69465496 GGGTCTTGATTCATCTTCCA 59 NA Mus musculus 50 Grb10 ENSMUSG00000020176 ENSMUST00000109654,ENSMUST00000109653,ENSMUST00000078449,ENSMUST00000093321,ENSMUST00000079913,ENSMUST00000109656 3 6 6 80 11 11836801 11837014 CCTGAATGCAGTGATTCAC 58 11836739 11836757 TGCTTGATGATCCTGTGAG 59 NA Mus musculus 50 Drg2 ENSMUSG00000020537 ENSMUST00000018568 1 1 1 88 11 60275694 60275712 TACTCTTCCGAGAAGACTG 57 60275763 60276068 GTTATACACATAGAGGCAGG 57 NA Mus musculus 50 Nrcam ENSMUSG00000020598 ENSMUST00000110751,ENSMUST00000020939,ENSMUST00000110750,ENSMUST00000110748 3 4 4 80 12 45648266 45648285 AATGAAAGCCACAAAGAGGA 59 45648326 45650876 AATAATTGGAGTAGGTAGGCC 58 NA Mus musculus 50 Timm22 ENSMUSG00000020843 ENSMUST00000021203 3 1 1 152 11 76223326 76224632 TGTCTGGTAGAGTCTTACC 57 76227594 76227612 ATAATCGATTGCAGCAGAG 57 NA Mus musculus 50 2310004I24Rik ENSMUSG00000020910 ENSMUST00000072719,ENSMUST00000116364,ENSMUST00000116363 1 3 3 94 11 66851937 66853728 GATTGTGAGCCATCTTCCT 59 66851861 66851882 TGTGAGACCATATGATTGACAG 59 NA Mus musculus 50 Eftud2 ENSMUSG00000020929 ENSMUST00000107060,ENSMUST00000021306 1 2 2 80 11 102730456 102730475 AGATCTGATGGACAACTCTG 58 102729953 102730413 TCTACGAAACAGGTCTTGC 59 NA Mus musculus 50 Gtf2a1 ENSMUSG00000020962 ENSMUST00000021345 3 1 1 80 12 92808272 92811018 ATCAAGTATTACGAGTGCTG 57 92808211 92808229 GTTAGTAGCTGTTGAACCG 58 NA Nonspecific Mus musculus 50 Tdp1 ENSMUSG00000021177 ENSMUST00000021594 2 1 1 241 12 101152319 101153670 CTACTTCCACAAGTGGTCAG 59 101183453 101183471 TCACTTTGAAGGTGTCCAG 59 NA DesignRelaxed Mus musculus 50 Mtr ENSMUSG00000021311 ENSMUST00000099856,ENSMUST00000110618 2 2 2 95 13 12287569 12287587 GAAGCCTTTCTTTGACGTC 59 12286065 12287510 CTGGCTTCTTCACCTACTG 59 NA Mus musculus 50 Shc3 ENSMUSG00000021448 ENSMUST00000021898 2 1 1 82 13 51568217 51575477 CTCCAAACAGATCATAGCG 57 51561916 51561934 CAACATAGTCCGTTGTGTC 58 NA Mus musculus 50 Habp4 ENSMUSG00000021476 ENSMUST00000021929 3 1 1 80 13 64283516 64283534 ATATTCGGAAGCCAGAGTC 58 64283577 64285890 CCTTCACCATATCGTCTCTG 59 NA Mus musculus 50 Trpc7 ENSMUSG00000021541 ENSMUST00000022023,ENSMUST00000109871 3 2 2 80 13 56905920 56905939 TATGATCGGAATGTTCAACC 57 56891144 56905877 AAGCTTTCTTCAACTGTGG 58 NA Mus musculus 50 1200014M14Rik ENSMUSG00000021671 ENSMUST00000099295 3 1 1 81 13 97180650 97180668 AGTTTGGCGATAATGGGAG 59 97180713 97184443 GAATGGTTTGCACTGTGAC 59 NA Mus musculus 50 Spcs1 ENSMUSG00000021917 ENSMUST00000022478 2 1 1 60 14 31814051 31814071 CTAGCTGAACAGATGTTTCAG 58 31813932 31814032 CGTAGATAAACCCAACTATTGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 F630043A04Rik ENSMUSG00000021965 ENSMUST00000022536 1 1 1 100 14 58435547 58435565 GAGAAGCCATAGGAACTGG 59 58430486 58435484 ACTTACGTATTCCACATCGT 58 NA Mus musculus 50 Scel ENSMUSG00000022123 ENSMUST00000095576,ENSMUST00000110762,ENSMUST00000110760 3 3 3 80 14 104001398 104001417 AACAGTCTGTTCAAGGAGTC 59 104001460 104002479 GTTTCCAGAATTGGAGCTG 58 NA Mus musculus 50 Bcl2l2 ENSMUSG00000022194 ENSMUST00000022806,ENSMUST00000111476 1 2 2 86 14 55503509 55503527 GGCATTCTTTGTCTTTGGG 59 55503577 55503595 ATCCAATCCTGCACTTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cideb ENSMUSG00000022219 ENSMUST00000001497,ENSMUST00000100533 2 2 2 152 14 56376803 56376821 CAGTATCCACTGTGAGCTC 59 56374099 56376688 TCTCCAGGACCTTATCTAGC 59 NA Mus musculus 50 Tm7sf4 ENSMUSG00000022303 ENSMUST00000022913,ENSMUST00000110308 3 2 3 60 15 39586744 39586764 GGAAGTTCACTTGAAACTACG 59 39590874 39590892 AGAATCATGGACGACTCCT 59 NA DesignNoJunction Mus musculus 50 St13 ENSMUSG00000022403 ENSMUST00000023039 3 1 1 81 15 81208424 81213421 CCCTAAATGATGGTGAGCT 59 81208361 81208379 TACAGAATAGCCAAGCGAG 59 NA Mus musculus 50 Oplah ENSMUSG00000022562 ENSMUST00000023222 3 1 1 85 15 76135625 76135643 CAGATGCTTACCTCACTCC 59 76135477 76135578 GACTTGCACATTCTTTAGCTG 59 NA Mus musculus 50 Cxadr ENSMUSG00000022865 ENSMUST00000114229,ENSMUST00000023572 1 2 2 110 16 78329302 78329320 TAAATGTGACCAACCTGCA 59 78329394 78333615 AAGGCTTAACAAGAACGGT 59 NA Mus musculus 50 Mrpl39 ENSMUSG00000022889 ENSMUST00000116584,ENSMUST00000023607 2 2 2 80 16 84724230 84725381 CAAGTTACACAGAATCGGT 57 84724168 84724186 TCATACTGGAAGCAAACAC 57 NA Mus musculus 50 Aqp2 ENSMUSG00000023013 ENSMUST00000023752 2 1 1 81 15 99412605 99413542 CTCCTTGGGATCTATTTCACC 59 99413585 99413603 CATCAAACTTGCCAGTGAC 59 NA Mus musculus 50 Gps2 ENSMUSG00000023170 ENSMUST00000072581,ENSMUST00000116358,ENSMUST00000057884 1 3 3 91 11 69729605 69729708 CTCGGACTCATCTTCTCTG 58 69729763 69729781 GTATCTGTACGGGAAGCTG 59 NA Mus musculus 50 Slc25a27 ENSMUSG00000023912 ENSMUST00000024705 1 1 1 80 17 43798607 43798627 GTCACCTATGAACATCTACGG 59 43794738 43798565 TCCAATGACCGATTTCCAG 59 NA Mus musculus 50 Crisp2 ENSMUSG00000023930 ENSMUST00000024724 1 1 1 80 17 40920234 40920252 TGGAATTGCTTACTGTCCC 59 40904309 40920193 ATCACATTGTTACCCATAGGAC 59 NA Mus musculus 50 Cuta ENSMUSG00000024194 ENSMUST00000114935,ENSMUST00000025027,ENSMUST00000114931 1 3 3 109 17 27075112 27075371 GTTTGTTCGATCTGTGCAC 59 27075021 27075039 AAACCGATTCTGTGACCTG 59 NA Mus musculus 50 Gnal ENSMUSG00000024524 ENSMUST00000025402,ENSMUST00000076605 3 2 2 86 18 67295284 67351035 TATTCCCAGGAGTTCTTTGAC 59 67351083 67351101 CTGGTACTCGTTGGATCTC 59 NA Mus musculus 50 Rtn3 ENSMUSG00000024758 ENSMUST00000025667,ENSMUST00000065304,ENSMUST00000088171,ENSMUST00000088169 2 4 4 114 19 7509507 7509525 GGTCTCTTACCTCATCCTG 58 7507071 7509429 CAAGTAGGCCTTGAATGGA 59 NA Mus musculus 50 Rpp30 ENSMUSG00000024800 ENSMUST00000025714 3 1 1 82 19 36168946 36174671 TGTTAATGTGGCAATTGAGC 59 36174716 36174734 TGTACCTTCTCATCGTTGC 59 NA Mus musculus 50 Mrpl11 ENSMUSG00000024902 ENSMUST00000025836 1 1 1 141 19 4962966 4963335 TTTATAAAGCCCGACAGGA 58 4963526 4963544 ATACGTGCTTCAAACTCAC 58 NA Mus musculus 50 Dnajc4 ENSMUSG00000024963 ENSMUST00000025915 1 1 1 86 19 7062761 7063926 TATGTTGCCTTCAGGAAGC 59 7062693 7062712 AGTGTCATTGTAGATGGCTG 59 NA Mus musculus 50 Gyk ENSMUSG00000025059 ENSMUST00000113978,ENSMUST00000026039,ENSMUST00000069684,ENSMUST00000081161 2 4 4 80 X 82956465 82957693 ATCAATGCTGAAGAAAGCG 58 82956403 82956421 CTGAGTTGTAACCCAACCA 59 NA Mus musculus 50 Habp2 ENSMUSG00000025075 ENSMUST00000078284,ENSMUST00000095948 1 2 2 80 19 56388710 56389725 CACTGTACCGACATAAACAC 58 56389768 56389786 CTGTTCATGGGATTCTGTC 57 NA Mus musculus 50 Mrpl43 ENSMUSG00000025208 ENSMUST00000097715,ENSMUST00000052320 3 2 2 253 19 45080424 45080564 TGGCCGAATACCTTAATGG 59 45080188 45080206 TTTACTGTGCTTGCATCGA 59 NA DesignRelaxed Mus musculus 50 Gaa ENSMUSG00000025579 ENSMUST00000106259,ENSMUST00000026666,ENSMUST00000106256 3 3 4 113 11 119136062 119136175 CTGGATGTTGTGGGATACC 59 119136252 119136270 GGTCATGTTCTCCACTACC 59 NA Mus musculus 50 Nrp1 ENSMUSG00000025810 ENSMUST00000026917 1 1 1 80 8 130887285 130942623 AGACTGCAAGTATGACTACG 59 130942666 130942684 ATCTTCCCACAGAACTTCC 58 NA Mus musculus 50 Klf7 ENSMUSG00000025959 ENSMUST00000114089,ENSMUST00000055001 1 2 3 170 1 64125417 64125435 AGTTAAGAGTGGACAGAGC 58 64088996 64125283 TTGTAAGGCTTCTCACCTG 59 NA Mus musculus 50 Clk1 ENSMUSG00000026034 ENSMUST00000034868,ENSMUST00000027195 3 2 2 80 1 58478667 58478685 AAGAGATCACATAGCAGCG 59 58478140 58478626 TTCCAGATAATAGCTGTCTGTC 59 NA Mus musculus 50 Fmo9 ENSMUSG00000026560 ENSMUST00000027843,ENSMUST00000111405 1 2 2 80 1 168594780 168594798 CTGAGCAAATTACCCTCAG 57 168593773 168594737 CTTTACATACCGTTTCTCCA 57 NA Mus musculus 50 Gbgt1 ENSMUSG00000026829 ENSMUST00000028172 2 1 1 94 2 28353928 28353946 ACATACCCTATTACCTCCC 57 28357628 28357726 GTACTGTAACTGTGTCACAG 57 NA Mus musculus 50 Dolpp1 ENSMUSG00000026856 ENSMUST00000028209,ENSMUST00000113612 2 2 2 66 2 30251276 30251511 CACGATTTCATTCCTTGGG 58 30251541 30251559 GATGACGTGTTTGATCAGC 59 NA DesignNoJunction Mus musculus 50 Traf1 ENSMUSG00000026875 ENSMUST00000028234,ENSMUST00000113064 2 2 2 80 2 34811765 34811784 ATCTGTCCTAAATGCAGAGC 59 34804613 34811723 ATCAGAGTGAACCTTCTCCT 59 NA Mus musculus 50 Slc4a10 ENSMUSG00000026904 ENSMUST00000054484,ENSMUST00000112480,ENSMUST00000102735 3 3 3 83 2 62124951 62124970 GTTCTTCTCCACAGTTACCA 59 62125016 62126778 ACTATGGATCGAACCTTGG 58 NA Mus musculus 50 Lcn4 ENSMUSG00000026919 ENSMUST00000028283 2 1 1 80 2 26524911 26524932 GACCACTACATCATATACTGTG 57 26524173 26524872 TTCCGGATACTTTCCTATGAG 58 NA Mus musculus 50 Wdsub1 ENSMUSG00000026988 ENSMUST00000028368,ENSMUST00000102751,ENSMUST00000112561 3 3 3 176 2 59714782 59714800 AATGAGGTGTCTACACAGC 59 59711357 59712305 AATTCAAAGCCTAAGACACG 58 NA Mus musculus 50 4933406J08Rik ENSMUSG00000027229 ENSMUST00000028661 3 1 1 75 2 122019039 122024137 AAGTGCAGAGCATCATCTC 59 122024175 122024194 CACTGGATAACTATGGAGCG 59 NA DesignNoJunction Mus musculus 50 Eif3j ENSMUSG00000027236 ENSMUST00000028668 3 1 1 105 2 121854551 121854569 CACGTTCTCTATGGAGGAC 59 121854638 121866900 CCAGTTATCCTTCACGTCC 59 NA Nonspecific Mus musculus 50 Mtch2 ENSMUSG00000027282 ENSMUST00000062223 2 1 5 130 2 90687536 90687681 CATCCAGGAACAACTTCCA 59 90687775 90687793 AAGTTGAGAAGAGTCACCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Odf2l ENSMUSG00000028256 ENSMUST00000098539,ENSMUST00000098538,ENSMUST00000106192,ENSMUST00000029920,ENSMUST00000073928 3 5 5 81 3 144790839 144790977 TGAAAGTGAGAACAGAAACC 57 144791021 144791039 ATTCTGAAACAGACACGAG 57 NA Mus musculus 50 Anp32b ENSMUSG00000028333 ENSMUST00000102926,ENSMUST00000072244 2 2 2 80 4 46481590 46481608 GATAGTGTAGAGGAAGCCC 58 46481651 46482765 ATCCTCTCCTTCTTCATCCT 59 NA Mus musculus 50 Tmem50a ENSMUSG00000028822 ENSMUST00000030626,ENSMUST00000105863 3 2 2 81 4 134465574 134465593 CAGGATGGATCAATTCAACC 58 134461311 134465532 CGATACTGCGTTAATCATGAG 58 NA Mus musculus 50 Mecr ENSMUSG00000028910 ENSMUST00000030742,ENSMUST00000105983 2 2 2 185 4 131409719 131410509 ATGATCCAAGGGAACTATGG 58 131413697 131413715 AATCAGTGCTTCCTCACTG 59 NA Mus musculus 50 Agtrap ENSMUSG00000029007 ENSMUST00000030865 1 1 1 60 4 147455859 147456389 CATAGGCATGTTTCTTGGT 57 147455817 147455838 GCTAATGTAGATAATGTCCAGG 58 NA DesignRelaxed Mus musculus 50 Klb ENSMUSG00000029195 ENSMUST00000031096 3 1 1 116 5 65771203 65771224 GAGACAGGGATATCTACATCAC 59 65771300 65774556 TGAGATATGCTTTCAGAGCC 59 NA Mus musculus 50 Slc10a6 ENSMUSG00000029321 ENSMUST00000031263 1 1 1 80 5 104047425 104047444 CTCTGCCTCTACATCTACAC 58 104046728 104047384 AAGGGTAATTCCTATGCTCTG 59 NA Mus musculus 50 Bmp3 ENSMUSG00000029335 ENSMUST00000031278 3 1 1 89 5 99301876 99301895 TGGAGCGAATGGATTATCTC 59 99301947 99308768 TGGTTTCAAAGACTTTGGC 58 NA Mus musculus 50 Ppef2 ENSMUSG00000029410 ENSMUST00000031359 3 1 1 80 5 92673880 92674416 AACCTACGATATGGCTTCAC 59 92673744 92673763 ATCCTGAAGTGTCCTTAGGA 59 NA Mus musculus 50 Ulk1 ENSMUSG00000029512 ENSMUST00000112410,ENSMUST00000031490 1 2 2 80 5 111215445 111216112 TGTGCAAATGGTACAATCAG 58 111215384 111215402 AGGGCTTTGTGATATCTCG 59 NA Mus musculus 50 Asns ENSMUSG00000029752 ENSMUST00000115542,ENSMUST00000031766 2 2 2 80 6 7631301 7631319 AGTTCAGTATCCTCTCCAG 57 7630201 7631258 TAATTTGCCACCTTTCTAGC 58 NA Mus musculus 50 Nt5c3 ENSMUSG00000029780 ENSMUST00000101367,ENSMUST00000031793,ENSMUST00000116607 2 3 3 81 6 56838392 56839464 GAAGAAAGTTACTGCAGCT 57 56838329 56838347 TAAGGGAACTTCTCTTCCA 57 NA Mus musculus 50 Hoxa1 ENSMUSG00000029844 ENSMUST00000000964,ENSMUST00000114436 2 2 2 69 6 52107075 52107570 AACAGGGAAAGTTGGAGAG 59 52107024 52107042 CTTGGTGGTGAAATTGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmf1 ENSMUSG00000030059 ENSMUST00000095664,ENSMUST00000095665 3 2 2 110 6 97123394 97125779 AGAAGATGTTTGCAAGACAG 58 97123303 97123321 TTATCATACGCTTCCTCCA 57 NA Mus musculus 50 Plxna1 ENSMUSG00000030084 ENSMUST00000049845 3 1 1 81 6 89285476 89287152 ACTCCTCGTACTCCTATGAG 59 89285414 89285432 ATGACAAAGTTGCCATTCC 58 NA Mus musculus 50 Slc6a13 ENSMUSG00000030108 ENSMUST00000064580 1 1 1 80 6 121282472 121283342 ACAATTGCTACAGGGACTG 59 121283386 121283404 TGGAGAAGATAGCAAACCC 58 NA Mus musculus 50 Rassf8 ENSMUSG00000030259 ENSMUST00000111704 3 1 2 88 6 145757007 145757025 GTTCAGAGGATCGTCTGTG 59 145757076 145763585 CTTCCAGTTCGACCTATAGC 59 NA Mus musculus 50 Atg7 ENSMUSG00000030314 ENSMUST00000032457 1 1 1 91 6 114674985 114726986 CACCCAAAGTTCTTGATCAG 58 114727038 114727058 GGTCAAGTCTTCTAAGAAGGA 58 NA Mus musculus 50 Trpm1 ENSMUSG00000030523 ENSMUST00000107525,ENSMUST00000085222,ENSMUST00000098399,ENSMUST00000107527,ENSMUST00000098398,ENSMUST00000107516,ENSMUST00000107519,ENSMUST00000032737 2 8 10 100 7 71344235 71346781 TAAAGCCATGTACATCCGA 58 71346845 71346863 ATATCAAGAGCTTCGGGAG 58 NA Mus musculus 50 Blm ENSMUSG00000030528 ENSMUST00000081314 1 1 1 80 7 87619103 87625231 ACAACTGCCAGGTTATCTG 59 87619041 87619060 ATGCATGAATCACAAATCGC 59 NA Mus musculus 50 Mrpl46 ENSMUSG00000030612 ENSMUST00000032841 3 1 1 111 7 85926367 85926386 TTATGATGAGGAACAAGAGC 57 85925487 85926293 TTTGTCAGCTTCTGTTTCC 58 NA Mus musculus 50 Prss8 ENSMUSG00000030800 ENSMUST00000032988,ENSMUST00000084541,ENSMUST00000098016 2 3 3 96 7 135071341 135071359 ATAAATGGGTGGTGTCTGC 59 135070725 135070743 CTGTAGGAGTCTAGCTGGT 59 NA DesignNoJunction Mus musculus 50 Cdh11 ENSMUSG00000031673 ENSMUST00000075190 1 1 1 80 8 105171414 105171434 GACCAAGATTTATCTTCAGCC 58 105161071 105171374 CAGTGTTATCTCTGTTGTCTC 58 NA Mus musculus 50 Pou2f3 ENSMUSG00000032015 ENSMUST00000034513 3 1 1 92 9 42954986 42984377 AACAGACAGATTAAGACGGAG 59 42954914 42954932 CATCATGGTAGGTCCTTGG 59 NA Mus musculus 50 Sc5d ENSMUSG00000032018 ENSMUST00000052725 3 1 1 83 9 42064287 42066678 GAGACTTTCCAAATGGCTG 58 42064222 42064243 GAATCCAGTAGATCAACATGTC 58 NA Mus musculus 50 2410004A20Rik ENSMUSG00000032214 ENSMUST00000034737 2 1 1 103 9 72950723 72950742 GAGATTTGGATATTCGGACC 57 72950807 72951032 AGAGCCTCTATTTCCATCAG 58 NA Mus musculus 50 Crabp1 ENSMUSG00000032291 ENSMUST00000034830 2 1 1 98 9 54616215 54616233 AACAAGATTCACTGCACAC 58 54616295 54620641 GCCAAATGTCAGGATTAGC 58 NA Mus musculus 50 Aph1b ENSMUSG00000032375 ENSMUST00000034934,ENSMUST00000113730 2 2 2 114 9 66637570 66638417 CTGTTGGCCTATGTTTCTG 58 66637474 66637492 GAGAATCACCATGAATGCC 58 NA Mus musculus 50 Rbm6 ENSMUSG00000032582 ENSMUST00000112323,ENSMUST00000035201 3 2 2 83 9 107703084 107703104 GGAACTCTAATGATCCATGAC 57 107698860 107703039 AGCCTTACATCGTTTACAG 57 NA Mus musculus 50 Trib3 ENSMUSG00000032715 ENSMUST00000040312,ENSMUST00000099213 3 2 2 75 2 152165453 152165471 TGTCTTCAGCAACTGTGAG 59 152164369 152164387 ATCTGATCCAGTCATCACG 58 NA DesignNoJunction Mus musculus 50 Rims3 ENSMUSG00000032890 ENSMUST00000071093,ENSMUST00000106283 1 2 2 186 4 120559577 120559595 TCAGTGACTTTCTGGATGG 58 120561689 120561972 TTGATATAGGTGGCTGGGA 59 NA Mus musculus 50 Entpd6 ENSMUSG00000033068 ENSMUST00000094467 3 1 1 93 2 150589908 150591196 GAAACCTGCTGAGAATGAC 58 150591252 150591271 AATTCTATAGGTGACCTCCG 58 NA Mus musculus 50 Spata2L ENSMUSG00000033594 ENSMUST00000098328 1 1 2 82 8 125759472 125759490 CTTTGAGCTCCTAGAGCTG 59 125754575 125759428 GATTGTACAGCTTGATAGTGG 58 NA Mus musculus 50 Zbtb41 ENSMUSG00000033964 ENSMUST00000039867 3 1 1 81 1 141320773 141320791 CCGTCATCATTCAGAACAG 58 141320835 141325712 TCATATTTCCCTATCCGGTC 58 NA Mus musculus 50 Fstl5 ENSMUSG00000034098 ENSMUST00000038364 1 1 1 80 3 76233714 76233735 TGATCTGCTCAAGTATGATGAC 59 76233776 76286156 TGGATCACCTGAAATGCTC 59 NA Mus musculus 50 4632415K11Rik ENSMUSG00000034105 ENSMUST00000049156 1 1 1 124 8 122296370 122296388 ATTCACTGCATTCCTGTCC 59 122295276 122296282 CCTCTGTGAACTTCTGGAC 59 NA Mus musculus 50 Chmp7 ENSMUSG00000034190 ENSMUST00000036381 1 1 1 93 14 70118386 70118405 TTTATACCAACAGTGTGCCT 59 70118098 70118330 GGGATCAAACCTCCTTCTG 59 NA Mus musculus 50 Setmar ENSMUSG00000034639 ENSMUST00000049246 1 1 1 65 6 108015233 108025720 GTATACTCCTGATCATGTTGCT 59 108025746 108025764 CCAGGGAAGGTTATTTGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Dhcr24 ENSMUSG00000034926 ENSMUST00000047973 2 1 1 84 4 106237086 106237104 CGGAAAGTACAAGAAGACC 57 106237151 106244025 TCGAACAATCTGTTTCTTGG 58 NA Mus musculus 50 C8a ENSMUSG00000035031 ENSMUST00000048947,ENSMUST00000064873,ENSMUST00000106808 3 3 3 81 4 104499319 104499339 AGTGCCATTACATATCAGTCC 59 104494801 104499276 GGTAGATAGGCTGCATCTC 58 NA Mus musculus 50 B830045N13Rik ENSMUSG00000035131 ENSMUST00000111931 1 1 2 122 1 148345956 148361806 GAGATTCAGGGTGTTGAGG 59 148361892 148361910 TATCCACTCCCATAGAGCC 59 NA InUTR Mus musculus 50 Sec31a ENSMUSG00000035325 ENSMUST00000094578,ENSMUST00000112922,ENSMUST00000112918 2 3 4 60 5 100812932 100814151 ATTACCAGGCTTATCACTGC 59 100812891 100812910 CACAGGATTCAACAATCTCC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 1810055G02Rik ENSMUSG00000035372 ENSMUST00000039048 1 1 1 81 19 3715795 3716501 AGAGCCACGAAACATAGTC 59 3716546 3716564 ATCAGTCCTTGGAACTGTG 59 NA Mus musculus 50 Sstr1 ENSMUSG00000035431 ENSMUST00000044299 1 1 2 253 12 59314691 59314709 AGAATCTGGAGTCTGGAGG 59 59315189 59315207 CTGTCTTGTAGCCACTCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Ibtk ENSMUSG00000035941 ENSMUST00000039213,ENSMUST00000093806 2 2 2 80 9 85607247 85607265 ATGCAAGTAGAAGACGGAG 59 85604077 85607206 CTTCTTGAACATAGTTTCCGAG 59 NA Mus musculus 50 Slain2 ENSMUSG00000036087 ENSMUST00000069795,ENSMUST00000086498 2 2 2 140 5 73365954 73365973 CAATATCAACAGTGCCACTC 58 73366076 73367244 GGCAATGATCTTCGAACAG 58 NA Mus musculus 50 Ccdc38 ENSMUSG00000036168 ENSMUST00000048345,ENSMUST00000092215 1 2 2 109 10 93032660 93032678 GGAAGTCATCTGGGTTCAC 59 93033662 93036773 GAAATAAATCTCTGGCAGCAG 59 NA Mus musculus 50 Sh3tc1 ENSMUSG00000036553 ENSMUST00000070203,ENSMUST00000037959 2 2 2 90 5 36053566 36053584 ACTTCTCAGACGAAGATGC 59 36052320 36053512 GCTTCTTCTAACCAGTCCA 58 NA Mus musculus 50 Chst12 ENSMUSG00000036599 ENSMUST00000043050 1 1 1 60 5 141000038 141000056 CAACTACGAACTGAACCAC 58 141000080 141000098 CACGTAGCAGTAGATGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem184a ENSMUSG00000036687 ENSMUST00000110832,ENSMUST00000044002 2 2 2 154 5 140283994 140284321 CTGCTACGAAGCATTTGTC 59 140283771 140283790 TGATGGAGTAGGACATACCA 59 NA Mus musculus 50 Anln ENSMUSG00000036777 ENSMUST00000040912 1 1 1 80 9 22160538 22160559 CATTAGCAAGTACTGCAAACTC 59 22157806 22160499 CATTGGAAACATCATGCAGAG 59 NA Mus musculus 50 Ssx2ip ENSMUSG00000036825 ENSMUST00000039021 2 1 1 60 3 146100292 146101624 GTGTCTGAACACAGTTCCA 59 146101645 146101666 CACTTGGTTTACTTTCTTCAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Prf1 ENSMUSG00000037202 ENSMUST00000035419 2 1 1 62 10 60763170 60763188 AGAAGACCTATCAGGACCA 58 60763214 60765550 AACTGTACATGCGACACTC 59 NA DesignNoJunction Mus musculus 50 Bag4 ENSMUSG00000037316 ENSMUST00000038498 2 1 1 86 8 26887949 26887967 CTACTGGAATTCTGTGCGA 59 26881792 26887899 TAAGAATTCAGGCTCTGGC 59 NA Mus musculus 50 Nov ENSMUSG00000037362 ENSMUST00000050027 3 1 1 81 15 54580904 54583768 GGAAGTAACAGACAAGAAAGG 58 54583811 54583829 GCAATTCTCGAACTGTAGG 58 NA Mus musculus 50 Letm2 ENSMUSG00000037363 ENSMUST00000079160 2 1 1 80 8 26690877 26692162 CTTCCACCGAATATAGAGACTC 59 26690818 26690836 TGTGAGGTTCTCCTTTGAC 59 NA Mus musculus 50 Slc2a12 ENSMUSG00000037490 ENSMUST00000042261 2 1 1 104 10 22412053 22413810 GACAGTGACTGATCTTATTGGT 59 22413871 22413893 CCCTTAGTCTCAGGTATAAACAG 59 NA Mus musculus 50 1810019J16Rik ENSMUSG00000037600 ENSMUST00000042919,ENSMUST00000105901 1 2 2 236 4 133084791 133084809 CATCCGTATTAGTACCCGC 59 133086211 133086229 AATGATGAGTCTTGGCTGG 59 NA DesignNoJunction Mus musculus 50 H2-DMa ENSMUSG00000037649 ENSMUST00000042121 3 1 1 118 17 34275113 34275356 AATTGCCTATTGGGTACCC 59 34275438 34275456 AGAGGAAGAAGACAATGCC 59 NA DesignRelaxed Mus musculus 50 BC061194 ENSMUSG00000037708 ENSMUST00000095132 2 1 2 144 2 18620881 18632103 CAGAATGCGGGTATAATGTC 58 18632210 18632228 GAAGAATGTCACCCTTCAC 58 NA Mus musculus 50 Phf2 ENSMUSG00000038025 ENSMUST00000035540 1 1 1 80 13 48909122 48909142 TCTTGTTAGACAAGAAGGAGG 59 48908429 48909080 AGTCATCGCTCTTGTACAC 59 NA Mus musculus 50 F11r ENSMUSG00000038235 ENSMUST00000043839 2 1 1 96 1 173390689 173390707 TACTCTGGCTTCTCCTCTC 59 173390767 173390968 CATAGGGAGCTGTGATCTG 59 NA Mus musculus 50 Sesn1 ENSMUSG00000038332 ENSMUST00000099931,ENSMUST00000041438 2 2 2 80 10 41618164 41618183 TCTGTGACATTACAAATGGC 58 41618226 41622347 AGGAATCACTTACCGAAGC 59 NA Mus musculus 50 Eftud1 ENSMUSG00000038563 ENSMUST00000107296,ENSMUST00000039881 2 2 2 80 7 89806585 89806604 AGAGAAGATGAACAGGTCAG 58 89806646 89820128 GTACTCCTCATGACCTTCTG 59 NA Mus musculus 50 Alpk3 ENSMUSG00000038763 ENSMUST00000107348,ENSMUST00000043648 2 2 2 82 7 88248267 88248862 CCAAACTTCGAGGATACCA 58 88248908 88248926 GTTACACTGGTGGGAAGAG 59 NA Mus musculus 50 Jmjd1b ENSMUSG00000038773 ENSMUST00000043775,ENSMUST00000091949,ENSMUST00000091950 1 3 3 82 18 34983354 34984362 AAGAAACGAAAGATGCAGG 58 34984408 34984426 AGAGTTGAATGAGTCCAGC 59 NA Mus musculus 50 Jmjd1b ENSMUSG00000038773 ENSMUST00000043775,ENSMUST00000091949,ENSMUST00000091950 2 3 3 83 18 34983353 34984362 GAAGAAACGAAAGATGCAGG 59 34984408 34984426 AGAGTTGAATGAGTCCAGC 59 NA Mus musculus 50 Cldnd2 ENSMUSG00000038973 ENSMUST00000040227 1 1 1 156 7 50697641 50697660 GTAGCCAGAATACCATTGTC 58 50698323 50698587 CCCGCAATAAACAAGAAGG 59 NA DesignNoJunction Mus musculus 50 Picalm ENSMUSG00000039361 ENSMUST00000049537,ENSMUST00000107224,ENSMUST00000107223 1 3 3 80 7 97345459 97345480 CAACCAACCTTAATATACAGCC 59 97345520 97356101 AAACTGTATCTGTGCTCCTG 59 NA Mus musculus 50 AA536717 ENSMUSG00000039599 ENSMUST00000116507,ENSMUST00000090499,ENSMUST00000090503,ENSMUST00000037698 3 4 5 102 14 21171975 21171993 AATTCGAATTCGCGTTCTG 59 21172059 21175592 CATTCTGGTCAAGTTCACC 58 NA Mus musculus 50 Rbms3 ENSMUSG00000039607 ENSMUST00000044901,ENSMUST00000111773,ENSMUST00000111772,ENSMUST00000068962,ENSMUST00000069095,ENSMUST00000084824 3 6 6 128 9 117019120 117019138 ATACATCCGAGGACTTCCA 59 116868668 116965864 AAACCATAACCTTTGCACTG 58 NA Mus musculus 50 Capsl ENSMUSG00000039676 ENSMUST00000042360 2 1 1 80 15 9387521 9387542 GATCCTATTGAAAGACTTCGGT 59 9387583 9391424 AATTCGAAACACTCTGCCA 59 NA Mus musculus 50 Zmym5 ENSMUSG00000040123 ENSMUST00000111285 3 1 2 123 14 57423689 57429584 TGGAGAAGATTCATCAGTGG 59 57423585 57423603 GTTTCTAGATGTACCGGCT 58 NA InUTR Mus musculus 50 Fmo1 ENSMUSG00000040181 ENSMUST00000046049 1 1 3 177 1 164780342 164781490 TCAATACCAAAGTGTGCAG 57 164769882 164780202 GTTAGTATACCTGGGAAGGA 57 NA Mus musculus 50 Slc25a28 ENSMUSG00000040414 ENSMUST00000046038 1 1 1 96 19 43740313 43741417 CATATTGCCAATGGTGCAG 59 43739107 43739125 TGTACATCTGCATCCTCTG 58 NA Mus musculus 50 Zbtb38 ENSMUSG00000040433 ENSMUST00000093798 3 1 1 182 9 96589440 96618638 GTGTTCTGAGATGACAGTC 57 96589276 96589294 AAATAAAGACTTGAGGCGG 57 NA InUTR Mus musculus 50 Rbm35a ENSMUSG00000040728 ENSMUST00000108313,ENSMUST00000043781,ENSMUST00000108310,ENSMUST00000108311,ENSMUST00000108312,ENSMUST00000041113 2 6 6 81 4 11306489 11306508 GAAAGAGTTCAAGAAGTGCT 58 11294320 11306445 AAAGTTCAGGCTTTCTGTC 57 NA Mus musculus 50 MGI:2388655 ENSMUSG00000040865 ENSMUST00000046020,ENSMUST00000097718 3 2 2 90 1 63125630 63132257 CTGTTTCCTCATTTAGGATTGG 59 63125561 63125579 ACCATGCGACTTGATATGG 59 NA Mus musculus 50 Sh3kbp1 ENSMUSG00000040990 ENSMUST00000073094,ENSMUST00000112456,ENSMUST00000080394,ENSMUST00000112451,ENSMUST00000112453,ENSMUST00000112447,ENSMUST00000112449,ENSMUST00000112445 2 8 8 80 X 156404347 156404365 ATCGAGGAGCTTAAGATGC 59 156404407 156409806 CTTAATCTCACGTTTCTGCTG 59 NA Mus musculus 50 Npnt ENSMUSG00000040998 ENSMUST00000093971,ENSMUST00000042729,ENSMUST00000042744 1 3 3 80 3 132569428 132569671 TATCAGTGCCATGACATCG 59 132569366 132569385 CCCATGTATGTTGTAACACC 58 NA Mus musculus 50 Oosp1 ENSMUSG00000041857 ENSMUST00000112977 2 1 2 193 19 11763321 11765432 GCCATTAGTCTGCAATGTG 59 11763014 11763166 CTGGTCTCTACTTTATTGGCA 59 NA Mus musculus 50 Tbc1d22b ENSMUSG00000042203 ENSMUST00000048677 2 1 1 80 17 29709974 29709993 GTACTTTGGCTTCATTGAGC 59 29710033 29712111 TCAATGTGAATCTGTCTGTAGG 59 NA Mus musculus 50 Rabif ENSMUSG00000042229 ENSMUST00000097568 1 1 2 89 1 136402700 136404890 CAATCCTGATGGTGATGTG 58 136404943 136404961 GTACAGTATGACCTCACGT 58 NA Mus musculus 50 Usp48 ENSMUSG00000043411 ENSMUST00000105842,ENSMUST00000030549,ENSMUST00000105840,ENSMUST00000105841,ENSMUST00000097838,ENSMUST00000055131,ENSMUST00000105836 1 7 10 123 4 137200404 137206217 GAAGATTCAGATCATGCACG 59 137206303 137206321 GACAGACTCAGGAATGACG 59 NA Mus musculus 50 Tox3 ENSMUSG00000043668 ENSMUST00000109621,ENSMUST00000060304 1 2 2 146 8 92778390 92781780 AAACAGAGCCATTGGAGAG 59 92778262 92778280 ATTGCAGCCTGTGTATCTC 59 NA DesignNoJunction Mus musculus 50 Letm2 ENSMUSG00000043794 ENSMUST00000059474 1 1 1 106 8 26707878 26707897 AGAATGTCCAAAGTTTAGGG 57 26707966 26707984 GAGGAATTGGGAAGGTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NM_207149.2 ENSMUSG00000044228 ENSMUST00000054304 2 1 1 60 2 85594140 85594159 TCTAATGTCATCACTCCCAC 58 85594181 85594200 TGGCTACAATGATGAAGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Q4VAB4-2 ENSMUSG00000044681 ENSMUST00000094937 1 1 1 131 5 28535664 28535682 CAGACCTTTGAAATTCGCG 59 28533811 28533829 ACATCAGACACAGTACCTG 58 NA DesignNoJunction Mus musculus 50 Cetn4 ENSMUSG00000045031 ENSMUST00000102955,ENSMUST00000071400 2 2 3 74 3 37208306 37208324 TAACATCAAGAGGGTTGCC 59 37208087 37208269 GCTTCATCAAGCATTTCCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Wdr40b ENSMUSG00000045284 ENSMUST00000115056,ENSMUST00000060481 3 2 2 60 X 42142294 42142312 CTGACATGTTCAATGGCAG 59 42142252 42142270 TGAGCATACACAGGTAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tssk2 ENSMUSG00000045521 ENSMUST00000055374 1 1 1 60 16 17899842 17899862 GAGACTTCCAGAGCTAAAGAC 59 17899884 17899902 AGGTACTTGCTTTCTCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4932409I22Rik ENSMUSG00000045912 ENSMUST00000059699 1 1 1 65 10 79074922 79074940 TTCTTCTTTGATGGCCTGG 59 79074875 79074893 ATTGACCACCTTGATCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 AB041806 ENSMUSG00000046109 ENSMUST00000062902 1 1 1 60 4 137952933 137952952 GGAGAAGATTCTTGATGGTG 57 137952975 137952993 CAGTTCCCACAAGTCTCAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Kcnrg ENSMUSG00000046168 ENSMUST00000051184 3 1 1 62 14 62226902 62230499 GGAGTCAGGTACATTTCCA 58 62230524 62230543 CAAGACATTTGTTCCGTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Golph3l ENSMUSG00000046519 ENSMUST00000098861,ENSMUST00000060323 1 2 2 144 3 95411949 95413601 TAGACAGAAAGGTCCTGCT 59 95420966 95420984 AAAGGGTTCCATGTCTCAC 59 NA Mus musculus 50 Kctd4 ENSMUSG00000046523 ENSMUST00000050120,ENSMUST00000110892 2 2 2 60 14 76363096 76363114 ATGTGGGTTTAGACTGCTG 59 76363138 76363156 ATCGCTGTGAACAATTGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ar ENSMUSG00000046532 ENSMUST00000052837 2 1 1 86 X 95510271 95510289 CTCAAGAGTTTGGATGGCT 59 95510338 95511202 CATCCACTGGAATAATGCTG 58 NA Mus musculus 50 Tas2r143 ENSMUSG00000046652 ENSMUST00000057398 2 1 1 60 6 42350747 42350770 GACTTCTATCGGTACTATTACCTG 59 42350789 42350807 GGAAGAAAGGAGTGAACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gchfr ENSMUSG00000046814 ENSMUST00000057454 1 1 1 131 2 118993594 118995414 CACTCAGATCCGTATGGAG 58 118997680 118997698 TCGTTGACGTAGTATTCGT 58 NA DesignNoJunction Mus musculus 50 4930408G06Rik ENSMUSG00000047383 ENSMUST00000054653 2 1 1 72 1 59060038 59060056 ACTACAAGACCTCATCTCC 57 59054445 59060004 CATGTATAGTTCTCCTTGCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Atmin ENSMUSG00000047388 ENSMUST00000109099,ENSMUST00000055162 1 2 2 170 8 119478657 119478675 AGTGCAGTAATTCCTACGG 59 119478809 119480166 TACTAGGTGGGTCTCTGTG 59 NA Mus musculus 50 Olfr820 ENSMUSG00000048745 ENSMUST00000059244 3 1 1 60 10 129454545 129454565 ATCATTCTCTTGACTCTGCTG 59 129454584 129454605 TTCGGAGGAAGAAATACATAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 A030001H23Rik ENSMUSG00000048766 ENSMUST00000068851 2 1 2 106 4 112442504 112445645 CATTCAAGGAATGTATGTGC 57 112442417 112442435 TGCAAGTTAAACTCCTAGC 57 NA Mus musculus 50 BC028663 ENSMUSG00000048967 ENSMUST00000059500 3 1 1 61 8 72411732 72411751 AAATATACTGGCACCGACTG 59 72411690 72411709 GTGGTGGAGATGTTTATTGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rgag4 ENSMUSG00000049191 ENSMUST00000056556,ENSMUST00000113631 3 2 2 60 X 99265683 99265702 TGTACCTGGCTGAATTTCTG 59 99265642 99265660 AAGTGATCCTCGTGATCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cyp20a1 ENSMUSG00000049439 ENSMUST00000060608 2 1 1 82 1 60436256 60436277 CTAAACTAACTCCAGTTTCTGC 59 60436320 60439256 GACGAGTGTCTCCTTAGGA 59 NA Mus musculus 50 Stxbp4 ENSMUSG00000049992 ENSMUST00000053420 3 1 1 61 11 90338983 90339004 GAAATCTTAGGCTACTGTAAGG 57 90338943 90338961 AAATACACAAATGCTCGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1023 ENSMUSG00000050128 ENSMUST00000056408 1 1 1 60 2 85727174 85727194 CTACTCTTCCAATGTTACTCC 57 85727216 85727234 AATGGTCTTCTGGTCTGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 1700123J19Rik ENSMUSG00000050197 ENSMUST00000058206 2 1 1 88 X 35476283 35482923 AGGTCAAAGTGAAGGTGTG 59 35482975 35482993 ACCAGGCGGAATATTTCTC 59 NA Mus musculus 50 4930422G04Rik ENSMUSG00000051278 ENSMUST00000043108,ENSMUST00000106383 3 2 2 80 3 127287698 127288940 CAGCTTCCATCATAGAGCA 59 127288984 127289002 TGTCAACTTTGGAAAGTGC 58 NA Mus musculus 50 Cacna1c ENSMUSG00000051331 ENSMUST00000078320,ENSMUST00000112793,ENSMUST00000075591,ENSMUST00000112790 3 4 5 80 6 118607382 118607401 GGGAACATCGTAATTGTCAC 58 118606597 118607341 ATAGAGCTTTCCCTTGAAGAG 59 NA Mus musculus 50 Tubgcp6 ENSMUSG00000051786 ENSMUST00000109353,ENSMUST00000041656 1 2 3 60 15 88938519 88939007 GTACCTCAGCTTCAGAGAC 59 88938477 88938495 CTCTTTGGAAATGAGCACG 59 NA DesignNoJunction Mus musculus 50 F730043M19Rik ENSMUSG00000052125 ENSMUST00000101487 2 1 2 179 12 33832145 33832163 TCCATCCTTATCCCTCAGG 59 33825972 33827511 GACGTTCACTAATCCTGCT 59 NA InUTR Mus musculus 50 Rps10 ENSMUSG00000052146 ENSMUST00000114882,ENSMUST00000114881 1 2 3 62 17 27767446 27768157 TGAGTTCCAGTTTAGAGGC 58 27767402 27767420 CTCCAACTTCACTGAGGTG 59 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 1700024B05Rik ENSMUSG00000052334 ENSMUST00000064162 2 1 1 60 14 42575098 42575117 TTCGAATCTTGGACATTGAC 58 42575138 42576113 GTGAATTCAGTGTTCATCCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 1700109F18Rik ENSMUSG00000052371 ENSMUST00000064205 1 1 1 60 2 74550490 74550509 CAAGGGACATACTTTAGGGA 58 74550449 74550467 CGCGTTATTCAAGAACCTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Il1rapl1 ENSMUSG00000052372 ENSMUST00000113966,ENSMUST00000078875,ENSMUST00000113964,ENSMUST00000113965 2 4 4 80 X 84292098 84545932 CTGTTACAGCTCCTCTAACTG 59 84292038 84292057 GTTGAGTCTCCTGAACTGTC 59 NA Mus musculus 50 Serp2 ENSMUSG00000052584 ENSMUST00000064517 3 1 1 80 14 76949832 76949852 GAAGAGAAATATCCTGTTGGG 58 76933037 76949793 TATGATCTGGAAGATAGCTGAG 58 NA Mus musculus 50 C920016K16Rik ENSMUSG00000053390 ENSMUST00000075524 3 1 2 60 17 33139559 33139577 TTCTTTGTCTATGGCCCAG 59 33139726 33139744 CTGACATCTCCGTAGTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000054178 ENSMUSG00000054178 ENSMUST00000067077 3 1 1 60 19 23798944 23798962 ACACAAGCAATGTCTTTGC 59 23798985 23799004 AGCATGAGCTCATTACAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lair1 ENSMUSG00000055541 ENSMUST00000086401,ENSMUST00000068865,ENSMUST00000086400,ENSMUST00000108598 1 4 6 121 7 3962375 3962393 TTTCCTCCTTTGTCTTTCC 57 3962089 3962196 TAGTAGCTAGATTTAGCCTCTC 58 NA Mus musculus 50 5730407I07Rik ENSMUSG00000055695 ENSMUST00000069422 3 1 1 60 15 33527578 33527597 AGAAACTATCTGAAGCTGGC 59 33527620 33527638 TGACTATTGTTTGCCTCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Usp39 ENSMUSG00000056305 ENSMUST00000070345 3 1 1 80 6 72269784 72269805 TATGAATTACAAGACCTCCAGG 59 72269225 72269745 CTTCCAAATCTGAATGTACGC 59 NA Mus musculus 50 Tyw1 ENSMUSG00000056310 ENSMUST00000044204,ENSMUST00000040213,ENSMUST00000100662 2 3 3 103 5 130734913 130738695 ATCAAGAAGCAGGTCACTC 59 130738761 130738780 ATCTTCACTCCAGAAACGTG 59 NA Mus musculus 50 Six3os1 ENSMUSG00000056364 ENSMUST00000070429 3 1 1 167 17 86007237 86014952 AATAGAAGAACTGCAGAGTGG 59 86007090 86007108 ATACCAAGGCTTGGTACTG 58 NA DesignNoJunction, InUTR Mus musculus 50 ENSMUSG00000056652 ENSMUSG00000056652 ENSMUST00000070905 1 1 1 63 11 77968004 77968022 CAGACTGCGACTAATAGGG 59 77967959 77967977 CATCAGCACTACCTCAGTG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 D17Wsu92e ENSMUSG00000056692 ENSMUST00000114863,ENSMUST00000114859 2 2 2 73 17 27923205 27930863 CAGAATTCTGGAGCAGAGG 59 27923150 27923168 ACATGTCCAAACTGGTCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Cep110 ENSMUSG00000057110 ENSMUST00000113037,ENSMUST00000028235,ENSMUST00000028237 1 3 7 80 2 34975574 34975592 CTGGAAAGTTTGGAAGGTC 58 34975636 34978190 TTCTATCTCCTCCAAGCTG 58 NA Mus musculus 50 V1rb3 ENSMUSG00000057697 ENSMUST00000076086 3 1 1 62 6 90173977 90173996 ACTTAGTCCTAGAAGCTCCT 59 90173934 90173952 CAGGAGATGTGTTGGAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr695 ENSMUSG00000057832 ENSMUST00000080925 1 1 1 60 7 113858003 113858022 CCCATGTATCTTCTGCTCTG 59 113857962 113857981 TGATAACTGATGGTTGGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG224763 ENSMUSG00000058176 ENSMUST00000080694 3 1 1 68 17 37251292 37251310 GATTACATCGCTAGGGACC 59 37251342 37251360 CATCCTCTTCATGAAGGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Xlr5a ENSMUSG00000058328 ENSMUST00000114521,ENSMUST00000078574,ENSMUST00000114522,ENSMUST00000114520 1 4 4 80 X 70357641 70358694 GGATTTCAAAGGTGATGATGG 59 70357581 70357601 CTGAAAGAGGCATTTACATCC 59 NA Nonspecific Mus musculus 50 Kl ENSMUSG00000058488 ENSMUST00000078856 1 1 1 80 5 151785332 151790971 GACAACTACGTTCAAGTGG 58 151791015 151791033 CTTACTGTGATGCACATCC 58 NA Mus musculus 50 Tmod3 ENSMUSG00000058587 ENSMUST00000072232 2 1 1 81 9 75363054 75364288 ACCTTGCAGCTATTCTTGG 59 75362991 75363010 TTGACACCGTTACTACTTCC 59 NA Mus musculus 50 Map2k1ip1 ENSMUSG00000059039 ENSMUST00000075886 3 1 1 64 7 112098540 112098558 GTTCAATCGTTTGCCTCTG 59 112098494 112098512 CAATTAGTCCTGTGTTGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr365 ENSMUSG00000059429 ENSMUST00000074168 1 1 1 60 2 37057540 37057559 GTCTACTTTAGGCCTCTGTC 59 37057582 37057600 ACATAACAGTAGCTACCCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Irak4 ENSMUSG00000059883 ENSMUST00000076097 1 1 3 84 15 94384299 94384319 CTAGAGAAGGCAACAGTGG 59 94384367 94384385 GTTCTAGCTTCGGCATAGG 59 NA Mus musculus 50 Tmem26 ENSMUSG00000060044 ENSMUST00000080995 2 1 1 80 10 68203733 68211129 CCATGGAAACCAGTATTGC 58 68211172 68211191 AGGGTTTGATTGACATCTCC 59 NA Mus musculus 50 Prmt7 ENSMUSG00000060098 ENSMUST00000071592 2 1 1 100 8 108772313 108774216 ATATGATCAAGCACTCCCTG 59 108774279 108774297 GATCTCTTGAGGCTTGGAG 59 NA Mus musculus 50 Olfr530 ENSMUSG00000060974 ENSMUST00000074177 3 1 1 72 7 147559479 147559497 TAAACCAGTCGGTTGTGAC 59 147559425 147559443 AAGAGAACATCCTGGATCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ppef1 ENSMUSG00000062168 ENSMUST00000071204 2 1 1 80 X 157079923 157081208 AAATACAAGCTACACGGGA 58 157079861 157079882 GTCAATAATTGTACCGATTGGG 59 NA Mus musculus 50 Hist2h3c2 ENSMUSG00000062808 ENSMUST00000105105 3 1 1 91 13 23668075 23668093 GGCGTAAATTAGGGTAGTG 57 23668147 23668166 AGCTTATCGATATACAGCCT 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Klk1b1 ENSMUSG00000063133 ENSMUST00000078835 3 1 1 81 7 51225872 51225987 CCTGTCAAGTTCCAATATGC 58 51226031 51226049 CATAGGCTTTGTCACAGTC 58 NA Mus musculus 50 Olfr811 ENSMUSG00000063173 ENSMUST00000076437 3 1 1 64 10 129238674 129238692 GGAAGCTTTCAAACATGTG 57 129238628 129238647 GTCTAAACCTTGTCTCACTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Nkx6-3 ENSMUSG00000063672 ENSMUST00000071588 3 1 1 198 8 24266683 24266701 CCTGAGTGACACTATCCAC 59 24268074 24268092 CTTCTTCCTCCACTTGGTC 59 NA DesignNoJunction Mus musculus 50 EG245405 ENSMUSG00000063816 ENSMUST00000078326 2 1 1 60 X 43809143 43809161 CCTCTAAGAACCGAGAAGC 59 43809101 43809119 TTGGAGACTCTGATAGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nlgn1 ENSMUSG00000063887 ENSMUST00000075054 3 1 2 80 3 25811706 25819109 GAAGATGAAGATATTCGGGAC 57 25811646 25811665 AGTACCTTCCATGTAAGAGC 58 NA Mus musculus 50 V1rh8 ENSMUSG00000064243 ENSMUST00000074324 3 1 1 68 13 22684021 22684039 TCTACTGGACAGATTGTGC 58 22683971 22683990 TTATCATCAGGGTAGTGTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Clasp1 ENSMUSG00000064302 ENSMUST00000049404,ENSMUST00000070989 3 2 2 80 1 120467564 120475403 GGATTGTGATATCGTGTCC 57 120475446 120475465 CCTCCTTCTATCTCACTACC 58 NA Mus musculus 50 mmu-let-7i ENSMUSG00000065406 ENSMUST00000083472 2 1 1 61 10 122422751 122422769 AGTAGTTTGTGCTGTTGGT 59 122422708 122422726 TAGCTTGCGCAGTTATCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-let-7a-1 ENSMUSG00000065421 ENSMUST00000083487 3 1 1 61 13 48633617 48633635 GTGGGATGAGGTAGTAGGT 59 48633574 48633594 TATAGTTATCTCCCAGTGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxl18 ENSMUSG00000066640 ENSMUST00000110766,ENSMUST00000035985 1 2 2 125 5 143640367 143640385 GAGAATCCCTTACCACCTG 59 143634123 143634141 CTCGGATGACATCTGTCAG 59 NA DesignNoJunction Mus musculus 50 Psrc1 ENSMUSG00000068744 ENSMUST00000102630,ENSMUST00000090561,ENSMUST00000102629 3 3 3 81 3 108188316 108189219 GCATAAAGAAGGAATCACCC 58 108189263 108189281 AGAATTGGTTGTGCAAGAG 58 NA Mus musculus 50 OTTMUSG00000000541 ENSMUSG00000069280 ENSMUST00000091719 3 1 1 97 13 23342066 23342084 CACAGTGACACATGATTCC 58 23342145 23342163 GGACATTCCCAGTGATCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 D230012E17Rik ENSMUSG00000070889 ENSMUST00000094950 3 1 1 80 1 54604946 54607828 TAAGCAAGTTCGATCTATCGG 59 54604886 54604904 CTGAAGAAGTCGAAGTGGT 59 NA Mus musculus 50 Serpina1d ENSMUSG00000071177 ENSMUST00000078869 2 1 1 68 12 105003942 105003960 AACTCTCAACAAGGAGCTC 59 105003011 105003910 ATATGGATCTGAGCATCGC 59 NA DesignNoJunction Mus musculus 50 2210408I21Rik ENSMUSG00000071252 ENSMUST00000095588 3 1 1 80 13 77442712 77455617 AACATTCCAGTCTCATCGT 58 77455660 77455679 CTTTACAGAGTCCATCAGTG 57 NA Mus musculus 50 1300003B13Rik ENSMUSG00000071266 ENSMUST00000088763 2 1 1 105 17 22588104 22590424 GCTAAATGTTTCCAAGGATCTG 59 22590490 22590508 ATCCATGTACAATGCCCTC 59 NA Mus musculus 50 Duxbl ENSMUSG00000072672 ENSMUST00000112340,ENSMUST00000100804 1 2 2 155 14 27082987 27083005 ACATCTGGCTAAGGAACTC 58 27085571 27086201 CTCCTTCTAGCTTCTTTAACTC 57 NA Nonspecific Mus musculus 50 Myo18b ENSMUSG00000072720 ENSMUST00000086617 2 1 1 83 5 113268712 113269653 AGAGATACAAAGAGGAAGGC 58 113268648 113268666 TTTGATCCACTACAGCCAC 59 NA Mus musculus 50 Rmcs2 ENSMUSG00000073421 ENSMUST00000114196 3 1 2 140 17 34404431 34404450 CACAGCTTATTAGGAATGGG 58 34404553 34404881 CTCTCAGTATCCACTCCAC 58 NA Mus musculus 50 A8Y5D9_MOUSE ENSMUSG00000073721 ENSMUST00000097798 1 1 1 81 4 143967588 143967609 GGAGACTCAATTACAAGTTGTC 59 143967149 143967547 TTCTAGTTTGTACTCCCTGG 58 NA Mus musculus 50 EG665186 ENSMUSG00000073747 ENSMUST00000097849 1 1 1 80 4 133748116 133748606 CTCTCCGAATAAGTGAGTCC 59 133747025 133747045 TCATGATCAGGAGAAAGATGG 59 NA Mus musculus 50 B230314M03Rik ENSMUSG00000073779 ENSMUST00000097930 3 1 1 73 4 107479693 107479712 TGTCTTGGTTAACTGTACCC 59 107479639 107479657 GATGACAGTTTGGCTACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr592 ENSMUSG00000073956 ENSMUST00000106893,ENSMUST00000098207 1 2 2 60 7 110335875 110335895 CTACATCCCATCAGTCTTCTC 59 110335916 110335935 GTAGTGTGGAATGTTGTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gsta1 ENSMUSG00000074181 ENSMUST00000098533 1 1 1 80 9 78110278 78110296 CCATTCTCAACTACATCGC 58 78110338 78113791 CTGAATACATGTCAATCAGGG 58 NA Nonspecific Mus musculus 50 Spc24 ENSMUSG00000074476 ENSMUST00000098942 3 1 2 60 9 21561761 21561779 AGAGGGATGTAGATGAGGA 58 21561623 21561737 AGATGAGCCACATACACTG 59 NA DesignRelaxed Mus musculus 50 ENSMUSG00000074641 ENSMUSG00000074641 ENSMUST00000099154 3 1 1 70 13 116897694 116897712 CAGTCTCGTGTACAATGTG 58 116897642 116897663 CCAATAGCTATGGATTAAGGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1313 ENSMUSG00000074946 ENSMUST00000099599 2 1 1 60 2 111912195 111912214 CTTCTACTGTGACCTTCCTC 59 111912154 111912173 TTCCAGTCTATATGTGTCCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRBV1 ENSMUSG00000076461 ENSMUST00000103262 2 1 1 78 6 40841699 40841717 CTGGTATCAGCAGGATCTC 58 40841758 40841777 AGATTTGACCTCTTTGTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV6-32 ENSMUSG00000076576 ENSMUST00000103377 3 1 1 60 6 70024283 70024302 TATTGTGATGACCCAGACTC 58 70024242 70024260 TATGGTAACCCTGTCTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV6-14 ENSMUSG00000076593 ENSMUST00000103394 3 1 1 296 6 70385232 70385428 TTGTCTGGTGTTGATGGAG 59 70384954 70384972 ATTCCAATGTTGCAGACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-47 ENSMUSG00000076709 ENSMUST00000103518 1 1 1 60 12 116229362 116229380 CAGTCTACTTGGAGCTCAG 59 116229320 116229339 CTTGCACAGTAATAAACAGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV11D ENSMUSG00000076775 ENSMUST00000103585 1 1 1 89 14 53444406 53444424 TAAGGTGGTTCAAACAGGA 58 53444477 53444495 AGTATCTCCCATTTGACGT 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRAV12-2 ENSMUSG00000076844 ENSMUST00000103656 1 1 1 196 14 54236387 54236406 AGTACTTACTCACCTTTCCT 57 54236565 54236583 AAAGCACAGTAGTACAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Q8CAQ2_MOUSE ENSMUSG00000078102 ENSMUST00000104901 3 1 1 239 16 4869332 4869350 TCTTAGGAAGCACCATCCT 59 4869111 4869130 GTTTACTCACTCCCTCACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:2442118 ENSMUSG00000078776 ENSMUST00000059886 2 1 1 101 7 28916701 28916719 AACAAAGTCTCCTACGTGC 59 28916783 28922096 GTACTGGTAGTCGATCTTCG 59 NA InUTR Mus musculus 50 Cacng6 ENSMUSG00000078815 ENSMUST00000108647 1 1 1 94 7 3431223 3432548 CAAGAAAGAGGTAAACCTGG 58 3432605 3432623 TACTGAGCACCATGATGAC 59 NA Mus musculus 50 Q3V0T3_MOUSE ENSMUSG00000078846 ENSMUST00000108773 3 1 1 71 8 128042738 128042756 CTTCATGCTCCTTTGACAG 58 128042685 128042703 CCCTTGTTCAAACACTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Wdr92 ENSMUSG00000078970 ENSMUST00000046955 2 1 1 80 11 17122263 17122282 CATAGATGGTGTAGGTGGAC 59 17122324 17124564 ACCTTTACAGTTCCATCACG 59 NA Mus musculus 50 Q3UMK6_MOUSE ENSMUSG00000079011 ENSMUST00000109944 1 1 1 107 8 77310216 77357358 GATGAGACGGATCATCGAC 59 77310127 77310145 AGTATCCTCAACACCAGGA 59 NA InUTR Mus musculus 50 ENSMUSG00000048936 ENSMUSG00000079351 ENSMUST00000112564 1 1 1 60 19 29860931 29861496 TTGATAACAAGGCACTTGAG 58 29860890 29860913 CATAGTAGCCTCTAGATGTAACTG 59 NA DesignNoJunction Mus musculus 50 C130092O11Rik ENSMUSG00000079548 ENSMUST00000067307 1 1 1 80 6 61760691 61760826 CTAGGATGCGATACAAATCTC 58 61760868 61760886 ATAGGAGTTTGGTATGCCA 57 NA Mus musculus 50 Q3UY87_MOUSE ENSMUSG00000079623 ENSMUST00000115135 1 1 1 60 5 22558685 22558704 TTGAAGGAGACTTTAACAGG 57 22558727 22558745 AGCATGTACAATGTGTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rhox4a ENSMUSG00000079639 ENSMUST00000115194 2 1 1 60 X 34808610 34809901 GCCAGAGTTAAGAGATGGT 58 34809924 34809943 ACTGACTTTGTCCTCTTCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 NP_001094956.1 ENSMUSG00000079652 ENSMUST00000115286 2 1 1 96 6 29236120 29237671 GAAACAGCAACTGAAAGCA 59 29237731 29237749 GTTCTAAGAGACTGCTGCT 58 NA Mus musculus 50 Ifnz ENSMUSG00000079858 ENSMUST00000094986 1 1 1 60 4 88432054 88432072 TATCTGAAGGCAAAGGCAC 59 88432096 88432114 CTTGCAATTGGACTCTGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 LOC100044847 ENSMUSG00000080219 ENSMUST00000116465 3 1 1 299 15 8469851 8469869 TACTGTCATAGTGTGCCTG 58 8469570 8469588 CACACTCTGACAGTACAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-1197 ENSMUSG00000080687 ENSMUST00000117037 1 1 1 60 12 110950551 110950571 CCTCAAGGTATTTGAAGATGC 59 110950590 110950611 GTCCTACGTCATAAATAAAGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tspan32 ENSMUSG00000000244 ENSMUST00000105922,ENSMUST00000105924 1 2 7 157 7 150200911 150200929 AATGAAGAGCCCATCTAGC 59 150201570 150204611 CTGGAAACCATGGGATCTC 59 NA Mus musculus 50 Wap ENSMUSG00000000381 ENSMUST00000102910 2 1 2 106 11 6536786 6536804 GAAGATAGAATGCTCCAGC 57 6535618 6536716 ACTGAAGGGTTATCACTGG 58 NA Mus musculus 50 Fap ENSMUSG00000000392 ENSMUST00000102732 2 1 2 80 2 62411549 62411567 CTGTCTTTGGAGTTACCAC 57 62394248 62411506 GTTTGTAAACTCTTGAGGGA 57 NA Mus musculus 50 Dlg3 ENSMUSG00000000881 ENSMUST00000113736,ENSMUST00000000901 3 2 4 81 X 98002573 98002593 AGGGATGATTGAGTCTAATCG 59 98005242 98008078 ATCCTCTTGTCCTTTCAGG 58 NA Mus musculus 50 Expi ENSMUSG00000000983 ENSMUST00000001009 2 1 1 117 11 83523403 83523421 ACTTGTGATGAACGATGCA 59 83524658 83524676 AGATCCATCTTCCACATGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Rac1 ENSMUSG00000001847 ENSMUST00000100489 2 1 2 111 5 144275556 144275575 GATTATGACAGATTGCGTCC 58 144269011 144270467 AAATTAAGAACACGTCGGC 58 NA Mus musculus 50 Tmem25 ENSMUSG00000002032 ENSMUST00000114705,ENSMUST00000002100,ENSMUST00000085951 3 3 3 89 9 44606263 44606281 AACATGAGCTTAACTGCTC 57 44604686 44606210 TCTCTGGTTTGAATTGCAC 58 NA Mus musculus 50 Rab3b ENSMUSG00000003411 ENSMUST00000106650,ENSMUST00000003502 3 2 3 90 4 108602054 108602073 TCGTGGGAAATAAGTGTGAC 59 108602126 108613243 AAGAAGTCAAACCCAAGCT 59 NA Mus musculus 50 Farsa ENSMUSG00000003808 ENSMUST00000003906,ENSMUST00000109754,ENSMUST00000095222 2 3 3 123 8 87385216 87385236 CAGTATAGAGGATGAAGTGCA 59 87385321 87387966 TTTCAGGATCACTTCCGTC 59 NA Mus musculus 50 Farsa ENSMUSG00000003808 ENSMUST00000003906 2 1 3 107 8 87391452 87391471 AAGTATACCTGGAAGCTGGA 59 87391541 87391660 TGTAAACGGCTTCTTCTGG 59 NA Mus musculus 50 Chn2 ENSMUSG00000004633 ENSMUST00000046856 2 1 4 123 6 54170688 54223081 GTGGAGAAGATCTCTTCACTG 59 54236106 54236124 AGTATTCACACCAGTGTGG 59 NA Mus musculus 50 Ly9 ENSMUSG00000004707 ENSMUST00000068878,ENSMUST00000004827,ENSMUST00000111277 3 3 3 129 1 173530038 173531122 CTTGTCTACAAGAGACTGGA 58 173529928 173529946 GCATCCATGTGTATGTCAC 58 NA Mus musculus 50 Pax3 ENSMUSG00000004872 ENSMUST00000004994 1 1 2 100 1 78099974 78099992 CATCTCAGCCCTATTGTCC 59 78099400 78099910 ATGAAAGGCACTTTGTCCA 59 NA Mus musculus 50 Slc1a2 ENSMUSG00000005089 ENSMUST00000080210,ENSMUST00000111204,ENSMUST00000111213,ENSMUST00000111212,ENSMUST00000005220,ENSMUST00000111211 2 6 7 83 2 102607154 102607172 CTCCTCATTCTCACAGCTG 59 102607219 102617596 TCTCATTCTATCCAGCAGC 58 NA Mus musculus 50 Fcer2a ENSMUSG00000005540 ENSMUST00000005678,ENSMUST00000111036,ENSMUST00000044741,ENSMUST00000111034 3 4 5 108 8 3688344 3688546 ATGAAAGCTCAGGACTCTC 58 3688147 3688165 GGAGTCTGTTCAGGTTCTG 59 NA Mus musculus 50 Mef2c ENSMUSG00000005583 ENSMUST00000109560 2 1 3 81 13 83792526 83792547 AATAATCGTAAGCCAGATCTCC 59 83792589 83794218 GATCCACATCCTCAGACAC 59 NA Mus musculus 50 Mpl ENSMUSG00000006389 ENSMUST00000102671,ENSMUST00000006556,ENSMUST00000106375 2 3 3 99 4 118116275 118116630 CTAAGTCCTTCTAAGGCCAC 59 118116195 118116213 GAGGTAAAGGAGTGCTCTC 59 NA Mus musculus 50 1700019E19Rik ENSMUSG00000007867 ENSMUST00000110215,ENSMUST00000077560 1 2 3 109 12 87479763 87481007 AAGAGATGGAAGATCACCG 58 87502133 87502151 TAGCACAAAGTCTTCCTCC 58 NA Mus musculus 50 Apol7a ENSMUSG00000010601 ENSMUST00000109779,ENSMUST00000010745 3 2 2 149 15 77223282 77223847 GATTTGTCCAGGGAAGAGG 59 77220412 77220431 ACCAAGATCTTCACTCAAGG 59 NA Mus musculus 50 Ttll5 ENSMUSG00000012609 ENSMUST00000095536,ENSMUST00000110219,ENSMUST00000110222,ENSMUST00000040273,ENSMUST00000040179 3 5 6 107 12 87230154 87230173 GGTTGTTGGAAGTGAATCTC 58 87232022 87233074 ACACAAATCCTACAACAGTG 58 NA Nonspecific Mus musculus 50 Bicc1 ENSMUSG00000014329 ENSMUST00000014473 1 1 4 80 10 70393391 70393409 AGATCAGGATCTGAAGGAG 57 70388117 70393348 TTACTTAGCTCTGAGATTGC 57 NA Mus musculus 50 Mtmr1 ENSMUSG00000015214 ENSMUST00000080703 3 1 8 89 X 68630797 68632198 CAAAGATTGGAGCTAGAGG 57 68636386 68636404 CTGTGCCAGTTTATTTCCA 57 NA Mus musculus 50 2700038C09Rik ENSMUSG00000016344 ENSMUST00000016488 2 1 3 226 2 180923005 180923023 CCTATCAGAATCTGCAGCC 59 180923212 180923231 ATGTTTCAAACATACCAGGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Kcnq2 ENSMUSG00000016346 ENSMUST00000016491,ENSMUST00000103047 2 2 10 82 2 180821720 180821738 GTCATCGAACAGTACTCGG 59 180820038 180821677 CCCACAATCATATCTATCCTGG 59 NA Mus musculus 50 Abr ENSMUSG00000017631 ENSMUST00000108408,ENSMUST00000072740,ENSMUST00000108407,ENSMUST00000094012,ENSMUST00000040910,ENSMUST00000065028,ENSMUST00000039558 2 7 7 80 11 76237579 76237598 GCATCTACAGGATATCAGGG 59 76236667 76237538 GTAGGATGTCCTTGTTATTGG 58 NA Mus musculus 50 Ctsa ENSMUSG00000017760 ENSMUST00000017904,ENSMUST00000103093,ENSMUST00000103092,ENSMUST00000109323,ENSMUST00000109319,ENSMUST00000109318 1 6 7 108 2 164659611 164659630 GATGAAATCGATTGTCTCCC 58 164659701 164659830 ACTCCACAAACCAGTAGTG 59 NA Mus musculus 50 Ppp2r5c ENSMUSG00000017843 ENSMUST00000065483,ENSMUST00000084985,ENSMUST00000017987 2 3 4 110 12 111807243 111807263 CAGTTCAAAGCAGAGAAACTC 59 111808974 111812969 ACTATACACTGCATACTGGG 58 NA Mus musculus 50 Gdap1l1 ENSMUSG00000017943 ENSMUST00000018087,ENSMUST00000109421 1 2 3 93 2 163273400 163276311 AGATCCGCAGACATTTAGC 59 163276367 163276386 TGTTTAGAAAGGTAGGGCTC 59 NA Mus musculus 50 Myo1b ENSMUSG00000018417 ENSMUST00000018561,ENSMUST00000046390,ENSMUST00000114537,ENSMUST00000114541 3 4 4 80 1 51814771 51814791 CTCAAAGATGCCATTGAAGAG 59 51814093 51814731 AGATGTACTCTTCCCATTAGC 58 NA Mus musculus 50 Ikzf1 ENSMUSG00000018654 ENSMUST00000095252 3 1 9 83 11 11648501 11648522 ACTAAAGTGTGATATCTGTGGG 59 11648566 11668896 AGGCACTTGTCAGTATGAC 59 NA Mus musculus 50 Ndel1 ENSMUSG00000018736 ENSMUST00000018880,ENSMUST00000101017,ENSMUST00000108672 3 3 3 83 11 68657470 68658843 GAAGTATAAGCAAAGCTTCCAG 59 68657408 68657427 TCCAACTCTGCTTCTAACTC 59 NA Mus musculus 50 Mpdu1 ENSMUSG00000018761 ENSMUST00000094073,ENSMUST00000018905 3 2 3 157 11 69470822 69470932 CTTCTGTTCAGGAAACTGGA 59 69470684 69470702 GTTCTAGAAGCGAGCTCAG 59 NA Mus musculus 50 Fxr2 ENSMUSG00000018765 ENSMUST00000108655,ENSMUST00000018909 3 2 2 84 11 69457383 69457401 ATATGCATTTCCGAAGCCT 59 69457448 69462317 TGCTTACTTGTCTCTAGGTG 58 NA Mus musculus 50 Fyn ENSMUSG00000019843 ENSMUST00000099967 3 1 2 113 10 39249395 39251828 GAAGTATGGATGGGTACCTG 59 39251904 39251922 CAGCTTCTTCATGATCTGC 58 NA Mus musculus 50 Sept10 ENSMUSG00000019917 ENSMUST00000020074 3 1 2 96 10 58629319 58629339 CTAAGAAGAAAGCTACCTGTG 58 58627684 58629262 AAATTGGAGTTCTTTCGGTC 58 NA Mus musculus 50 Cbara1 ENSMUSG00000020111 ENSMUST00000020311 1 1 2 84 10 59213286 59219462 TGATGGAAAGGAGTTCTGG 58 59230924 59230942 AAGGCTGTAGAAGATGCTG 59 NA Mus musculus 50 Dock2 ENSMUSG00000020143 ENSMUST00000101365 3 1 4 84 11 34173726 34173744 AAATCATCCTGAAGCTGGA 58 34173288 34173678 ACAGTAAACATGGACTCCA 58 NA Mus musculus 50 Fgf22 ENSMUSG00000020327 ENSMUST00000020577 3 1 1 67 10 79219388 79219406 TCTATGTGGCCATGAATCG 59 79219517 79219535 GAACCTACAGTCCACAGAG 59 NA DesignNoJunction Mus musculus 50 Acsl6 ENSMUSG00000020333 ENSMUST00000093106,ENSMUST00000108902,ENSMUST00000000145,ENSMUST00000108904,ENSMUST00000108905,ENSMUST00000072178,ENSMUST00000101211,ENSMUST00000101213,ENSMUST00000108899,ENSMUST00000064690,ENSMUST00000094194,ENSMUST00000108900 3 12 12 93 11 54140785 54141911 AGGCTATAGAGGACTGTGG 59 54143451 54143471 GTTGTACCACTTGTGAAACAC 59 NA Mus musculus 50 Rtn4 ENSMUSG00000020458 ENSMUST00000102843,ENSMUST00000102842,ENSMUST00000078830,ENSMUST00000102841,ENSMUST00000060992 1 5 5 84 11 29633765 29633785 CTGTGACTATCAGCTTTAGGA 58 29633831 29636368 AAATATGCCCTGAATGGGT 58 NA Mus musculus 50 D12Ertd553e ENSMUSG00000020589 ENSMUST00000069066,ENSMUST00000069005 3 2 2 81 12 12376701 12376719 TGAAAGGCTGCATAAAGGT 59 12376764 12379564 TTTGTGGTGAACCTGAGAG 59 NA Mus musculus 50 Rgs9 ENSMUSG00000020599 ENSMUST00000020920,ENSMUST00000106706,ENSMUST00000106704 1 3 4 80 11 109137182 109137203 CTACATCTATCCTTTGCAAGAC 58 109136934 109137142 AAATATGGCGTCTGAAATCG 58 NA Mus musculus 50 X83328 ENSMUSG00000020610 ENSMUST00000092500,ENSMUST00000103061 1 2 3 80 11 109295999 109296018 CTGAATGTTTGCCCTATCTG 58 109296061 109297885 CACCAGTGCTCTGTATCTC 59 NA Mus musculus 50 Ccdc46 ENSMUSG00000020728 ENSMUST00000061287,ENSMUST00000100297,ENSMUST00000106718,ENSMUST00000106715,ENSMUST00000106717 3 5 8 109 11 108613941 108618991 CCAAATCTTCTCAGATCATAGC 58 108619060 108619079 TTGTATAACATCCTGGAGCC 59 NA Mus musculus 50 Ubtf ENSMUSG00000020923 ENSMUST00000107121,ENSMUST00000107119,ENSMUST00000006754,ENSMUST00000107117,ENSMUST00000107115 3 5 7 122 11 102172783 102172801 GACCTTATCCAGAATGCCA 59 102171876 102172697 GTCCCGCATAATCTCATCC 59 NA Mus musculus 50 9030205A07Rik ENSMUSG00000021198 ENSMUST00000101099 3 1 2 93 12 104236871 104236890 CCTTCTTTGGACTACCAAGG 59 104236945 104240027 ACTGTCCAAGATCATGTTGG 59 NA Mus musculus 50 Hnrpk ENSMUSG00000021546 ENSMUST00000043269,ENSMUST00000116404 1 2 4 80 13 58494602 58494621 CGGATCATTACCATTACAGG 57 58493762 58494559 AGAATACTGCTTCACACTG 57 NA Nonspecific Mus musculus 50 Slc4a7 ENSMUSG00000021733 ENSMUST00000057015,ENSMUST00000090583,ENSMUST00000074344 1 3 3 80 14 15570793 15570812 GGAGTTGTATCCTGAATGGA 58 15570854 15572253 TGTCTAACACCATATCTGCA 58 NA InUTR Mus musculus 50 Scel ENSMUSG00000022123 ENSMUST00000110760 1 1 3 196 14 103959540 103964012 GACTAATAGGACTGAGGATCTC 58 103971229 103971247 TCAGGCTTTCAAGACTCTG 59 NA Mus musculus 50 1810015C04Rik ENSMUSG00000022270 ENSMUST00000022881 2 1 4 113 15 25819272 25819292 CATTTCCGTCATGATTCTTGG 59 25824892 25893990 ATGACTTCCCAGCTTTCAG 59 NA Mus musculus 50 Grhl2 ENSMUSG00000022286 ENSMUST00000022895,ENSMUST00000110353 1 2 3 87 15 37258069 37258087 ACGTACAGCTACAACAACC 59 37258138 37265469 TTCTTTCTGCTCCCTTGTC 59 NA Mus musculus 50 Efcab6 ENSMUSG00000022441 ENSMUST00000109466,ENSMUST00000016589 2 2 4 81 15 83813979 83819265 GGTGATTATGAGAAGTTCTTGG 58 83813919 83813938 TGAGATTCTTCAGGAAAGCA 58 NA Mus musculus 50 Itgb5 ENSMUSG00000022817 ENSMUST00000069345,ENSMUST00000115028 2 2 2 81 16 33902955 33910554 ATCAATGCGTACAGTAGCA 59 33910596 33910617 CAGTGAAGAAGAGATTAAGGTC 58 NA Mus musculus 50 Tcte1 ENSMUSG00000023949 ENSMUST00000113547,ENSMUST00000024745 1 2 2 105 17 45670312 45671703 CTTCCAGAACAACCCTATCC 59 45671771 45671789 AATCAAGTTAGCGGTCACC 59 NA Mus musculus 50 Epb4.1l3 ENSMUSG00000024044 ENSMUST00000112679,ENSMUST00000112678 3 2 6 125 17 69611625 69611643 AAGACAGAAGGAAGAAGGC 59 69619996 69624053 TATCTAGATCCTCCGTGGC 59 NA Mus musculus 50 Xdh ENSMUSG00000024066 ENSMUST00000024866 1 1 2 80 17 74242988 74243008 TTCCACTACTTCAGTTATGGG 59 74242113 74242948 TGTACGGAGATTCTTATGGTC 59 NA Mus musculus 50 Telo2 ENSMUSG00000024170 ENSMUST00000115181,ENSMUST00000024987 2 2 3 88 17 25244066 25244281 CCTCATACAGGTGCTTAAGG 59 25243997 25244015 TGATGTAACACTGCTGCTC 59 NA Mus musculus 50 Col11a2 ENSMUSG00000024330 ENSMUST00000076926,ENSMUST00000114258,ENSMUST00000114257,ENSMUST00000114255,ENSMUST00000114252,ENSMUST00000087497,ENSMUST00000114250 3 7 7 93 17 34180328 34181768 ATGAAGTCTTTGAAGGCGA 59 34181824 34181843 TCACATTCCAGATCCTTCTG 59 NA Mus musculus 50 Aqp4 ENSMUSG00000024411 ENSMUST00000079081,ENSMUST00000115856 1 2 2 82 18 15556643 15556664 CTGATGTTACTGGTTCAATAGC 59 15556151 15556602 GGCTCCAGTATAATTGATTGC 59 NA Mus musculus 50 Eif4ebp3 ENSMUSG00000024483 ENSMUST00000006205 1 1 6 80 18 36813913 36815138 AAACACATCCACTTCAGCA 59 36815181 36815200 GGAGGTATCTTTCGATCCTG 59 NA Mus musculus 50 Ltbp3 ENSMUSG00000024940 ENSMUST00000081496 2 1 2 80 19 5753984 5754003 CAATGGTTCCTACAGATGTC 57 5754044 5755561 CTGCACTCATCTATATCTTGG 57 NA Mus musculus 50 6330577E15Rik ENSMUSG00000025066 ENSMUST00000099352 3 1 3 104 19 47808049 47808272 GATCTTCATCTAATGCCCTC 57 47808339 47808357 CTTCCTTCTCTTCAACCTG 57 NA Mus musculus 50 Apex2 ENSMUSG00000025269 ENSMUST00000112720,ENSMUST00000112721,ENSMUST00000026303 2 3 6 105 X 147007219 147019019 GCAAGTAGTCTGGAATGCT 59 147007132 147007150 CCATGAAGAGCCCTATGTG 59 NA Mus musculus 50 Ttc4 ENSMUSG00000025413 ENSMUST00000106771 2 1 3 94 4 106344484 106347029 AGCCATCATAAGAGGAACTG 59 106344330 106344348 TCAGTTCAAGATGGCACAG 59 NA Mus musculus 50 Adam8 ENSMUSG00000025473 ENSMUST00000106069,ENSMUST00000106070,ENSMUST00000026546 3 3 3 83 7 147174518 147174717 TGGACAAGCTTTATCAGGA 58 147174453 147174472 GGCTGATGTAGAATTTGTCC 58 NA Mus musculus 50 Pnpla2 ENSMUSG00000025509 ENSMUST00000026583,ENSMUST00000064151 2 2 2 60 7 148643376 148643395 ACTTTAGCTCCAAGGATGAG 59 148643504 148643522 TACACCGGGATAAATGTGC 59 NA DesignNoJunction Mus musculus 50 Tk1 ENSMUSG00000025574 ENSMUST00000106330,ENSMUST00000026661,ENSMUST00000106329 3 3 3 264 11 117678444 117678462 GCAAGACAGTAATTGTGGC 59 117677356 117677374 TTCTTGTTGTCTGAGCCAG 59 NA DesignNoJunction Mus musculus 50 Ccdc7 ENSMUSG00000025808 ENSMUST00000095158 2 1 3 87 8 131571469 131571527 AGTTAAGGAAGAATGTGGCT 58 131550639 131551255 GTCCTTGCTAATCTCCTCC 59 NA Mus musculus 50 Itgb1 ENSMUSG00000025809 ENSMUST00000004192,ENSMUST00000090006 2 2 2 80 8 131234363 131237114 AAATTGAGATCAGGAGAACC 57 131237154 131237175 AAGGTAGTAGAGATCAATAGGG 57 NA Mus musculus 50 Idh1 ENSMUSG00000025950 ENSMUST00000027087 1 1 2 111 1 65207626 65207644 TTGCATTAAAGGCTTACCC 57 65206037 65206057 CCTTAAAGTTTGCTGAGCT 57 NA Mus musculus 50 Il1rl1 ENSMUSG00000026069 ENSMUST00000097772,ENSMUST00000053043 1 2 2 80 1 40499309 40499448 CTGTTCAGTGGTTTAAGAACTG 59 40499487 40499507 CGTTGTCAATGAACAAGTAGG 59 NA Mus musculus 50 Chit1 ENSMUSG00000026450 ENSMUST00000112256,ENSMUST00000086475 3 2 4 81 1 136047113 136047131 GATGACTTCAAGGGTTCCT 58 136047174 136047692 CGGATGGAAGATTTAGTTCCT 59 NA Mus musculus 50 Klhl12 ENSMUSG00000026455 ENSMUST00000027725,ENSMUST00000112232,ENSMUST00000116528 1 3 3 80 1 136380366 136380385 AGCAGTCTCCTATTGATGTG 59 136380428 136382310 TCTTGCGAGTGATACTTGG 59 NA Mus musculus 50 Nme7 ENSMUSG00000026575 ENSMUST00000027862 2 1 2 100 1 166278002 166309499 TCAGTGAAGGAATGTTGGG 59 166310780 166310798 TTCAACATTAGCCCGATCC 59 NA Mus musculus 50 Nmi ENSMUSG00000026946 ENSMUST00000028314,ENSMUST00000112705 3 2 2 108 2 51808399 51811460 TTGAGAAGGAAGAAGTCGC 59 51808309 51808327 CCTGTGTTTAGTGGGACTG 59 NA Mus musculus 50 Slc12a6 ENSMUSG00000027130 ENSMUST00000110987 3 1 4 118 2 112107236 112173544 GGATGTTACGGAGGATGAC 59 112173624 112174535 CCATTTCTTCCTCAAAGAGTG 58 NA Mus musculus 50 Duoxa1 ENSMUSG00000027224 ENSMUST00000110538,ENSMUST00000110537,ENSMUST00000028653,ENSMUST00000110539 3 4 4 108 2 122130438 122130456 GACCACGTCACTCATATCG 59 122129721 122130366 AATACACAGCAGTCCTGTG 59 NA DesignRelaxed Mus musculus 50 Mfap1b ENSMUSG00000027238 ENSMUST00000110593,ENSMUST00000077436,ENSMUST00000110592,ENSMUST00000110591,ENSMUST00000110590 1 5 5 96 2 121399400 121402072 CCTATATCCTTCAAGCGGAG 59 121399323 121399341 TTCTCTGAATGTTTCGGGA 58 NA Mus musculus 50 2210009G21Rik ENSMUSG00000027281 ENSMUST00000028737,ENSMUST00000099312 3 2 5 87 2 136825999 136869744 AGAAGAAAGAGGTTATGGCT 58 136869794 136869812 AGTATTCTGGGAGTTCTGG 57 NA Mus musculus 50 Lrrc57 ENSMUSG00000027286 ENSMUST00000102499,ENSMUST00000102498,ENSMUST00000102496,ENSMUST00000090011,ENSMUST00000028742,ENSMUST00000102497 1 6 6 80 2 120434455 120434473 ACCGCCTCTGATAATAGGA 59 120433788 120434412 TCATCAGGTAGAACAGTCAG 58 NA Mus musculus 50 Lrrc57 ENSMUSG00000027286 ENSMUST00000102499,ENSMUST00000102498,ENSMUST00000102496,ENSMUST00000090011,ENSMUST00000028742,ENSMUST00000102497 2 6 6 81 2 120434455 120434474 TACCGCCTCTGATAATAGGA 59 120433788 120434412 TCATCAGGTAGAACAGTCAG 58 NA Mus musculus 50 Rpo1-2 ENSMUSG00000027395 ENSMUST00000028874 2 1 2 187 2 128943816 128943834 CATTGGAACCATGGAACAG 58 128944926 128945881 ACACCTGTAATCCCATCTG 58 NA Mus musculus 50 Snx5 ENSMUSG00000027423 ENSMUST00000028909,ENSMUST00000110030 1 2 2 80 2 144080538 144080647 AAACTTAGGAAAGTGGAAGG 57 144080477 144080495 GTTGAGCATGTAGTATCGG 57 NA Mus musculus 50 Pdlim5 ENSMUSG00000028273 ENSMUST00000029941,ENSMUST00000058626,ENSMUST00000084039,ENSMUST00000090134 1 4 4 112 3 141967346 141967364 CAAGAAACGGCTGATTGAG 59 141966935 141967271 ATTCTGTCAGATGCTCAGTC 59 NA Mus musculus 50 Tln1 ENSMUSG00000028465 ENSMUST00000030187,ENSMUST00000102947,ENSMUST00000107901 3 3 3 98 4 43557353 43557459 AGAACTATGCAGGTATTGCA 59 43557274 43557292 CTGCAGGATCTGATGTCAG 59 NA InUTR Mus musculus 50 Npr2 ENSMUSG00000028469 ENSMUST00000030191,ENSMUST00000107877,ENSMUST00000107874 1 3 3 80 4 43661008 43661027 TCACCATCTACTTCAGTGAC 58 43661070 43661234 TAAGAAGTGTCACCACCTG 58 NA Mus musculus 50 Mllt3 ENSMUSG00000028496 ENSMUST00000097993,ENSMUST00000030219,ENSMUST00000078090 3 3 5 80 4 87428237 87428258 ATCTAGATGAGTTGGTAGAGCT 59 87420038 87428196 TAAGGTTCACGATCTGCTG 59 NA Mus musculus 50 Artn ENSMUSG00000028539 ENSMUST00000070816,ENSMUST00000097913 1 2 2 93 4 117601687 117601705 ATGATCCACTTGAGCTTCG 59 117600736 117601630 TTCACTCCATACCAAAGGG 58 NA InUTR Mus musculus 50 Cap1 ENSMUSG00000028656 ENSMUST00000106255,ENSMUST00000069533,ENSMUST00000106257 3 3 3 82 4 122542507 122544736 CAGAGATGTGGATAAGAAGCA 59 122542445 122542463 ACTCCTTGATGTAAGCCTG 58 NA Mus musculus 50 Ephb2 ENSMUSG00000028664 ENSMUST00000059287 1 1 3 155 4 136231440 136239844 CTATGAGAAGCAGGAGCTC 59 136231303 136231321 TACATCTTGCCACTGTAGC 59 NA Mus musculus 50 Ppp1r8 ENSMUSG00000028882 ENSMUST00000030702,ENSMUST00000105919 1 2 2 85 4 132390700 132396572 ACAAGCTAATTGAGAAGCTG 58 132390634 132390652 GTCGATAGTGAAGTCACAC 57 NA Mus musculus 50 Pftk1 ENSMUSG00000028926 ENSMUST00000115451,ENSMUST00000115452,ENSMUST00000030763,ENSMUST00000115450 2 4 5 81 5 5010885 5010903 AGATGATCCAAGGAGTTGC 59 4949585 5010843 GTTCCAAGAACCAGAAATATCC 59 NA Mus musculus 50 Add1 ENSMUSG00000029106 ENSMUST00000114340,ENSMUST00000114338,ENSMUST00000114335 3 3 5 81 5 34959448 34962002 CAAGTCGAAGACTAAGTGGA 59 34962045 34962064 GTTCAATGGAACAAACAGGT 58 NA Mus musculus 50 Srd5a3 ENSMUSG00000029233 ENSMUST00000031143 1 1 2 71 5 76578938 76578956 GACTGTACTGAGCCAAGTG 59 76582561 76582582 GCTTGTATCAGTAGATTCTTCC 58 NA Nonspecific, DesignNoJunction Mus musculus 50 6330548G22Rik ENSMUSG00000029402 ENSMUST00000031349,ENSMUST00000111453 3 2 2 61 5 124940151 124940170 CCATTGCCAAGGAATATGAC 58 124940194 124940212 TGGGTCTTCATCTGTACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Morn3 ENSMUSG00000029477 ENSMUST00000031437 1 1 2 113 5 123487770 123487788 AGCTGTTTGAAGGCTACTG 59 123487360 123487695 GAATCTCCACCTTAGGTATGG 59 NA Mus musculus 50 4930519G04Rik ENSMUSG00000029564 ENSMUST00000031547 3 1 3 177 5 115324338 115324356 AGAATCCATCGAATACCCG 58 115329603 115332817 ATCATCCTGGGAACTAACG 58 NA Mus musculus 50 Rbm19 ENSMUSG00000029594 ENSMUST00000031590 2 1 2 89 5 120581248 120582149 GTGTTTGACCATGAGACCA 59 120582202 120582220 AATAAGGAAGCTTCGGACC 59 NA Mus musculus 50 Adamts9 ENSMUSG00000030022 ENSMUST00000113438 1 1 2 80 6 92822832 92822850 GAGTAACCAGGAGAAATGC 57 92822433 92822788 CAGCTTCTAGAACATTCGG 57 NA Mus musculus 50 Arhgdib ENSMUSG00000030220 ENSMUST00000111892,ENSMUST00000032344,ENSMUST00000111891 2 3 3 85 6 136872837 136875200 CATGAGAGTGGATAAAGCC 57 136872770 136872788 CTTCCTCTACTGGAGTGAG 58 NA Mus musculus 50 Rad18 ENSMUSG00000030254 ENSMUST00000113178 3 1 3 99 6 112625812 112625830 GTTCAAGGAAACAAACAGC 57 112615324 112625750 AACCATGACCTGATTTAGGA 58 NA Mus musculus 50 Bcat1 ENSMUSG00000030268 ENSMUST00000111742,ENSMUST00000116504,ENSMUST00000032402,ENSMUST00000087468 1 4 4 80 6 144952924 144952942 CTGCATATTCCAACGATGG 58 144948816 144952883 CCTTCCATACTGGATATCAGTC 59 NA Mus musculus 50 Nr2f2 ENSMUSG00000030551 ENSMUST00000089565,ENSMUST00000032768 3 2 2 64 7 77502670 77502688 GAGTATAGCTGCCTCAAGG 59 77499793 77499811 GCTACATCAGACAGACCAC 59 NA DesignNoJunction Mus musculus 50 Myh14 ENSMUSG00000030739 ENSMUST00000048102,ENSMUST00000107900 2 2 3 184 7 51911053 51912803 TCAGCACCATGTCTTATGG 59 51909414 51910599 CTCCAACAGATAGGTCTCG 58 NA Mus musculus 50 Fgfr2 ENSMUSG00000030849 ENSMUST00000068807 2 1 4 182 7 137372301 137405275 TTAGAACCAGAAGGAGCAC 58 137372137 137372155 CTTATAGCCTCCAATGCGA 59 NA Mus musculus 50 Il13ra2 ENSMUSG00000031289 ENSMUST00000033646,ENSMUST00000112827 1 2 2 82 X 143829607 143829626 CAGAGCATTGTACAAATGGA 58 143828976 143829563 TTCCAAACTTCCTTCATCTG 57 NA Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112403,ENSMUST00000112401,ENSMUST00000078682,ENSMUST00000112398 1 4 10 143 X 156896795 156899282 CTACTCCAATGATGCTGCT 59 156903541 156903561 GAGTCATTGCAAAGAGATGAC 59 NA Mus musculus 50 Gabre ENSMUSG00000031340 ENSMUST00000064780,ENSMUST00000114557 2 2 2 83 X 69507837 69507856 AACACTTGGAAGCTATTGGA 59 69503895 69507791 CATGAAGTCACCAAATGGG 58 NA Mus musculus 50 Ctps2 ENSMUSG00000031360 ENSMUST00000112303,ENSMUST00000033727,ENSMUST00000112301,ENSMUST00000112300 3 4 7 81 X 159413147 159413166 TTTGGGAGGAACAATGAGAC 59 159413208 159434653 GTCACCATAAAGCTTCTTCAG 58 NA Mus musculus 50 Neo1 ENSMUSG00000032340 ENSMUST00000068664,ENSMUST00000114098 2 2 3 111 9 58728652 58732284 TTCCACAGAATCTGTTCGA 58 58728559 58728578 GTAAGAGGAGCTAGTAGCAC 58 NA Mus musculus 50 Pdcd6ip ENSMUSG00000032504 ENSMUST00000111861,ENSMUST00000035086 2 2 3 80 9 113583613 113587435 TTTGGCAAATGGAGTATTGG 58 113583552 113583571 ATAGACTGAGGTACAGTGTC 57 NA Mus musculus 50 Atp2c1 ENSMUSG00000032570 ENSMUST00000085133,ENSMUST00000038118,ENSMUST00000112558 2 3 4 83 9 105355916 105355934 CTAATGGAGATCTTGCGTC 57 105355161 105355870 CAATGACAATACCCTTTGCT 58 NA Mus musculus 50 Uba7 ENSMUSG00000032596 ENSMUST00000035216 1 1 2 173 9 107881774 107881877 TCAACTGCTACCAACAGAC 59 107882013 107882103 CCTCAAGCACTTTATCATGG 58 NA Mus musculus 50 Rasgrp2 ENSMUSG00000032946 ENSMUST00000113476,ENSMUST00000035716 1 2 5 80 19 6403499 6403517 CTGAAGGCTCTGTTAGACC 59 6403560 6404315 CCATTTGTAGGTAGGGACAC 59 NA Mus musculus 50 Stk36 ENSMUSG00000033276 ENSMUST00000087183,ENSMUST00000042446 2 2 5 117 1 74670404 74670422 CCTACAGGTGTTTCAGGAG 59 74670503 74672078 GACAGCAAAGCACATAAGG 59 NA Mus musculus 50 Armcx1 ENSMUSG00000033460 ENSMUST00000113201,ENSMUST00000035748,ENSMUST00000113198,ENSMUST00000113197 2 4 6 80 X 131253517 131254170 ACTTCCCAGAATCAAATCTG 57 131254213 131254231 AGACACCCTCACATATACC 57 NA InUTR Mus musculus 50 Idua ENSMUSG00000033540 ENSMUST00000112563,ENSMUST00000071650,ENSMUST00000045900 1 3 3 80 5 109108760 109108778 GGACTTTGATGACAAGCAG 58 109108819 109109139 CCATACCTACCAATGTATCTCC 59 NA Mus musculus 50 Vav3 ENSMUSG00000033721 ENSMUST00000106576 2 1 2 80 3 109467286 109467306 TACAGTTTCCATACAAGGAGC 59 109467348 109485732 GACTCAACAACTCACAGCT 59 NA Mus musculus 50 Kcnk10 ENSMUSG00000033854 ENSMUST00000110113,ENSMUST00000085120 3 2 2 95 12 99734464 99734483 TAGGAAACTCTTCCAACAGC 59 99728261 99734409 CAATATTCCCATACCCTATGGT 59 NA Mus musculus 50 Tesk2 ENSMUSG00000033985 ENSMUST00000045542,ENSMUST00000106457,ENSMUST00000106456 1 3 5 89 4 116473834 116474057 GCCTTATAATGAGAAGGCAG 58 116474109 116474127 GGAAGATAGTCCGGATCAG 58 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111698,ENSMUST00000111690,ENSMUST00000099941,ENSMUST00000111693,ENSMUST00000111692,ENSMUST00000111688,ENSMUST00000111686,ENSMUST00000111691,ENSMUST00000111697,ENSMUST00000067232,ENSMUST00000066177,ENSMUST00000036811 1 12 23 81 2 84443860 84443878 AGACCACAACAGAACACTG 59 84443052 84443815 AATCTTCTGCATCAAGGGT 58 NA Nonspecific Mus musculus 50 Tmem63c ENSMUSG00000034145 ENSMUST00000038233,ENSMUST00000110187,ENSMUST00000110185 3 3 3 81 12 88406494 88406512 TCTTTGTGCTCATCCTCTG 59 88406557 88407855 CTGTTCCAGTCCAGAACAG 59 NA Mus musculus 50 Fhod3 ENSMUSG00000034295 ENSMUST00000037097,ENSMUST00000115820,ENSMUST00000091991,ENSMUST00000115819 3 4 4 81 18 25271096 25271115 AGAACAATAAGACTCTGGGC 59 25271158 25272021 AATGCTTTGGCATTAGTTCC 59 NA Mus musculus 50 Myo5a ENSMUSG00000034593 ENSMUST00000113484,ENSMUST00000036772 3 2 2 125 9 75043998 75045459 AAGGATGATTGATCTGATGG 57 75049082 75049100 GATATGTTCTCCATCTGCC 57 NA Mus musculus 50 Rnps1 ENSMUSG00000034681 ENSMUST00000058094 3 1 3 114 17 24558780 24559095 CCAGGAATAACCACAGAGG 59 24559173 24559191 ATGCATAGCCTTTGGAGAG 59 NA Mus musculus 50 B3galt1 ENSMUSG00000034780 ENSMUST00000042456,ENSMUST00000112346 2 2 2 60 2 67956359 67956377 AAATGCTGATCCTGTTCTG 57 67956401 67956419 GATGTCATGGAAGATCTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Vps13c ENSMUSG00000035284 ENSMUST00000113629 1 1 6 138 9 67706665 67706683 TTATACCTGCTTGTGGTCC 58 67708683 67718991 TGGGCTTATCTTTCTCTGC 59 NA Mus musculus 50 6530402F18Rik ENSMUSG00000035513 ENSMUST00000071201,ENSMUST00000113833 1 2 6 87 2 29062998 29063016 AGGTGCAAGAAGAACTTCC 59 29059839 29062947 AATGAGATGAGGCATTGGG 59 NA Mus musculus 50 Wdr32 ENSMUSG00000035572 ENSMUST00000044459 2 1 2 88 4 45383372 45385805 CAAGTTCAGGAGTTTCACC 58 45385857 45385875 GGAAGTGATACAGTTTCCC 57 NA Mus musculus 50 Ggta1 ENSMUSG00000035778 ENSMUST00000044232,ENSMUST00000113002 3 2 8 94 2 35269794 35277707 GTCAACAGAATTCCAGAGG 57 35268927 35268946 TCTTCTTGATAACTGTGGGT 58 NA Mus musculus 50 Ggta1 ENSMUSG00000035778 ENSMUST00000102794,ENSMUST00000044255 2 2 8 135 2 35272023 35277713 GAATATGTCAACAGCCCAG 58 35268928 35268947 CTTCTTGATAACTGTGGGTC 57 NA Mus musculus 50 Slain2 ENSMUSG00000036087 ENSMUST00000069795 1 1 2 88 5 73349453 73349471 AGCAGTAGAAGTGACTCCA 59 73349523 73357058 TTCAGCCTTTGAGAAGTGG 59 NA Mus musculus 50 Pphln1 ENSMUSG00000036167 ENSMUST00000109256 1 1 3 129 15 93272130 93285889 GTCTCAGCATAGAAGTAAAGAG 58 93290120 93290138 TTCCTTCTCAGTTAGCCTG 58 NA Mus musculus 50 C330002I19Rik ENSMUSG00000036333 ENSMUST00000066652,ENSMUST00000110935 2 2 4 80 12 25725371 25725389 CCAACATCTCATCTCACGT 59 25725431 25726127 TCCTCCTTGATTACCTCTAGG 59 NA Mus musculus 50 Fxyd1 ENSMUSG00000036570 ENSMUST00000039909,ENSMUST00000071697,ENSMUST00000108110 3 3 3 82 7 31838484 31838920 TCACCTACGATTACCACAC 58 31838420 31838438 AAGGATGATAAGGATGCCC 58 NA Mus musculus 50 Zfp280c ENSMUSG00000036916 ENSMUST00000072292,ENSMUST00000088898,ENSMUST00000076635 1 3 4 90 X 45896821 45896839 ATACTTCTGGCTTAGACCG 58 45896606 45896768 GCTCTTTCGGTAACATTCTC 58 NA Mus musculus 50 Parp11 ENSMUSG00000037997 ENSMUST00000112195,ENSMUST00000112193,ENSMUST00000039680 3 3 4 109 6 127421587 127421608 TCAGTTAGCAGTGAAGATATCG 59 127421677 127424263 TGCTTCATTTCTGCAAAGTC 59 NA Mus musculus 50 Herc1 ENSMUSG00000038664 ENSMUST00000042824 2 1 4 81 9 66261931 66261950 TAGATTTGTTCTTGCAGCAC 58 66261994 66262101 TTTACCAGGTTGGTATCGG 58 NA Mus musculus 50 Rtel1 ENSMUSG00000038685 ENSMUST00000054622,ENSMUST00000098971,ENSMUST00000108815,ENSMUST00000108814 1 4 7 88 2 181090179 181090197 GATGATGACCTGGACAAGG 59 181090249 181090365 ATGCCAAATCTCTGTAGCA 58 NA Mus musculus 50 Atf7ip2 ENSMUSG00000039200 ENSMUST00000044005 2 1 2 111 16 10236280 10236298 AGCAACTCACCTAATAGCA 58 10237319 10240665 AAGATGGGCTTTCTATGCT 58 NA Mus musculus 50 Dcxr ENSMUSG00000039450 ENSMUST00000106148 1 1 2 93 11 120587205 120587414 CATACTGTCTACTGGTGCC 59 120587130 120587148 GTGTCATCACTACTGTGGG 59 NA Mus musculus 50 2700019D07Rik ENSMUSG00000039531 ENSMUST00000092596 1 1 3 107 10 33660039 33660057 TAGAGAATTAGCTCACCGG 58 33650137 33659968 GGCTTCAATAATTCCTGCA 58 NA Mus musculus 50 Fbxl5 ENSMUSG00000039753 ENSMUST00000114047,ENSMUST00000047857,ENSMUST00000087465 2 3 3 80 5 44164730 44164749 TGTACACTCTGACAATAAGC 57 44162058 44164688 TGTTCGTACTCATTCTTGAC 57 NA Mus musculus 50 Timeless ENSMUSG00000039994 ENSMUST00000105242,ENSMUST00000105240 2 2 8 95 10 127687155 127687350 CCTTCTTGCATGAATGGAG 58 127687408 127687427 ATCTTCACTTTCGTCCTCTG 59 NA Mus musculus 50 Ankrd6 ENSMUSG00000040183 ENSMUST00000084748,ENSMUST00000084750,ENSMUST00000035719,ENSMUST00000108168,ENSMUST00000084749 3 5 7 174 4 32923357 32923375 AAGGGTCATCTTTCTGTGG 59 32914153 32915693 TATTCCCATCCTTGTCCTG 58 NA Mus musculus 50 Klc3 ENSMUSG00000040714 ENSMUST00000108459,ENSMUST00000047170,ENSMUST00000108458 1 3 3 159 7 19982345 19982363 CTGGTGATCCAGTATGCTG 59 19981927 19982223 TGTATTTGTTCTGGTCCCTG 59 NA Nonspecific Mus musculus 50 Rbm35a ENSMUSG00000040728 ENSMUST00000108310,ENSMUST00000108311 3 2 6 80 4 11265970 11271269 AAGGTTACCAGTATGCAACC 59 11265909 11265928 TACAAACCCATTCTTTGGGT 59 NA Mus musculus 50 Sh3kbp1 ENSMUSG00000040990 ENSMUST00000073094,ENSMUST00000112456,ENSMUST00000080394,ENSMUST00000112451,ENSMUST00000112453,ENSMUST00000112447,ENSMUST00000112449,ENSMUST00000112445 3 8 8 81 X 156404346 156404365 TATCGAGGAGCTTAAGATGC 59 156404407 156409806 CTTAATCTCACGTTTCTGCTG 59 NA Mus musculus 50 Tardbp ENSMUSG00000041459 ENSMUST00000084125,ENSMUST00000055827,ENSMUST00000105699,ENSMUST00000105700,ENSMUST00000095719,ENSMUST00000045180 3 6 6 98 4 147996126 147996144 CTCATAGTGTTGGGTCTCC 59 147994830 147996065 ATCTTTCTTGACCTGAACCA 58 NA Mus musculus 50 Nol4 ENSMUSG00000041923 ENSMUST00000092015 3 1 3 84 18 22910528 22929189 CTTTCAATTCTCGACCTATTCC 58 22910465 22910483 CTACTCTCGCTTTCACAGG 59 NA Mus musculus 50 Specc1 ENSMUSG00000042331 ENSMUST00000049836,ENSMUST00000108709 3 2 3 80 11 61856506 61856524 CGAGACTGAAGAAGACCTC 59 61856568 61931210 GAATAGTCCCTGTGTTGCT 59 NA Mus musculus 50 Zmpste24 ENSMUSG00000043207 ENSMUST00000058754,ENSMUST00000106269 2 2 2 81 4 120759968 120759986 TGGAGGAATCCCTTACCTC 59 120756022 120759926 CTGAATGATCTCGTATTCTGGT 59 NA Mus musculus 50 Ccrl2 ENSMUSG00000043953 ENSMUST00000049984 2 1 2 79 9 110959300 110959318 AATATCAAGCAACCTGCCT 59 110958913 110958931 GCCACTGTGTAGTTATCCA 58 NA DesignNoJunction, InUTR Mus musculus 50 Tmem201 ENSMUSG00000044700 ENSMUST00000054459,ENSMUST00000105687,ENSMUST00000103208,ENSMUST00000052951 1 4 4 109 4 149103718 149103738 CGAGTACTACATCAAACACCA 59 149102345 149103647 CCGAGGAACTGAAACTCTG 59 NA Mus musculus 50 Dok7 ENSMUSG00000044716 ENSMUST00000114270,ENSMUST00000114273,ENSMUST00000050709 1 3 4 94 5 35409262 35409280 TGGATTCATCTTCGAAGGC 59 35417990 35418008 CAAACAGGAAGCTCATCTG 58 NA DesignNoJunction Mus musculus 50 Prkce ENSMUSG00000045038 ENSMUST00000097275,ENSMUST00000097274 1 2 3 80 17 87019304 87019323 GGAAGGGATTATGAATGGTG 58 87019366 87024678 AACTCCTGTAGGATCTCTG 57 NA Mus musculus 50 Mcart1 ENSMUSG00000045973 ENSMUST00000107796,ENSMUST00000116341 1 2 3 86 4 45417649 45417667 TAACAATGGACAACACTGG 57 45413034 45417601 GGGAAGAGTTTCTTTAACCTG 58 NA InUTR Mus musculus 50 Mrps7 ENSMUSG00000046756 ENSMUST00000058109,ENSMUST00000116321 3 2 2 99 11 115466137 115466155 GAAGTATGACCAGGAGCTC 59 115466218 115466346 GGTGAATTTGCTGATGACC 59 NA Mus musculus 50 Dnahc14 ENSMUSG00000047369 ENSMUST00000060610 3 1 2 86 1 183693539 183693559 GCTCAAGATAGCAATTACACC 59 183693605 183693998 GAATGTTTCAGGGACATTCTG 59 NA Mus musculus 50 Hes5 ENSMUSG00000048001 ENSMUST00000049621 3 1 1 258 4 154335283 154335301 CATCAACAGCAGCATAGAG 58 154335613 154335631 GTAAAGCAGCTTCATCTGC 59 NA DesignNoJunction Mus musculus 50 Neurod4 ENSMUSG00000048015 ENSMUST00000061571 3 1 1 60 10 129708028 129708046 CTTGTCTGAAGTCCTGGAG 59 129707986 129708005 TAGCATCTCTACAAATCCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1153 ENSMUSG00000048197 ENSMUST00000052300 2 1 1 237 2 87736350 87736368 AAAGAAGAATGGAGGTTGG 57 87736567 87736587 CCAACTGCAGTAGAATAACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Thnsl1 ENSMUSG00000048550 ENSMUST00000102952,ENSMUST00000102951 2 2 4 97 2 21131660 21134598 AGCTTGCTTGAAACTTTGG 59 21134659 21134677 GTGGTTCTGATTAGAGGCA 58 NA InUTR Mus musculus 50 A230107C01Rik ENSMUSG00000049676 ENSMUST00000047846 1 1 3 82 7 29980892 29980911 CCACCATCAAATACATGGTC 58 29976750 29980849 GTGATCATCTTGTAGTTCCTC 57 NA Mus musculus 50 A230107C01Rik ENSMUSG00000049676 ENSMUST00000085819,ENSMUST00000047846 3 2 3 80 7 29975038 29975243 CTGCTCACCAAGATTAAAGTC 58 29974978 29974998 GGAAGTCTTCTTGATGTTACG 58 NA Mus musculus 50 Bpil2 ENSMUSG00000050108 ENSMUST00000105305,ENSMUST00000061699 2 2 2 80 10 85453947 85453965 CTCTGGAACTCCAAGACTG 59 85453778 85453903 AGTTATACAGGGCACTGAG 58 NA Mus musculus 50 A730055C05Rik ENSMUSG00000050270 ENSMUST00000079077 2 1 2 82 11 66839625 66839643 ACACGAAAGTCTTTCTGCA 59 66839689 66843478 ATGTACACCACTGTCATGC 59 NA Mus musculus 50 Il31ra ENSMUSG00000050377 ENSMUST00000091226 2 1 3 114 13 113314471 113314490 AGCTGGTAGTGAACTTTGAG 59 113313808 113314398 GGTTCCTGGGATAAGATATACTC 59 NA Mus musculus 50 Zbtb26 ENSMUSG00000050714 ENSMUST00000067043,ENSMUST00000102789 2 2 2 60 2 37292007 37292027 GGACTTACCTTGTATTCATCC 57 37291967 37291986 CTGAATATCACTGTCCTCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gprc5c ENSMUSG00000051043 ENSMUST00000053361,ENSMUST00000077652,ENSMUST00000021071 2 3 3 69 11 114725814 114725833 CATGTTTGTGGAGAACAAGG 59 114727943 114727961 GTAAGGTGACACTGGTCTC 59 NA DesignNoJunction Mus musculus 50 Cacna1c ENSMUSG00000051331 ENSMUST00000078320 2 1 5 80 6 118625890 118625908 TCTTCATTCTGCTCAGCAG 59 118620465 118625847 AAGCAGTCATATGGTTCCTG 59 NA Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000099981,ENSMUST00000011934,ENSMUST00000111882,ENSMUST00000111865,ENSMUST00000099980,ENSMUST00000045194,ENSMUST00000045009 1 7 14 98 2 76813039 76813057 AAGCATACCCTGAAGACTC 58 76812485 76812977 CTTCTTCACCTTGAACCAC 58 NA Mus musculus 50 Zfp217 ENSMUSG00000052056 ENSMUST00000109155,ENSMUST00000063710 1 2 2 79 2 169941642 169941660 CATCTCAGAACGCATACAG 57 169941012 169941030 CTCAGAGATGTCTTCTGGG 58 NA DesignNoJunction Mus musculus 50 Arhgef15 ENSMUSG00000052921 ENSMUST00000065040,ENSMUST00000108671,ENSMUST00000108670 3 3 3 80 11 68764551 68764569 CCTTTCTTCGTGTATGTGG 58 68763590 68764508 CACGTTTGTATCCATAAGGC 58 NA Mus musculus 50 Gm609 ENSMUSG00000053182 ENSMUST00000114585,ENSMUST00000065467 1 2 2 80 16 45442605 45442624 TGTGTCAATGACTCACTCTG 59 45420041 45442562 CAAGGATTCGTGGTACCTC 59 NA Mus musculus 50 Adamts18 ENSMUSG00000053399 ENSMUST00000093113 1 1 3 85 8 116368809 116368827 GCAGTGTTTGTATCAGGGA 59 116301850 116368760 TTATCAGACCTGACAAGCC 58 NA Mus musculus 50 Slc39a8 ENSMUSG00000053897 ENSMUST00000081978,ENSMUST00000029810 2 2 2 80 3 135547738 135549774 TCTGGCAGATATGTTTCCA 58 135549818 135549836 ATGAAGAAGGTGAAATCCG 57 NA Mus musculus 50 EG634650 ENSMUSG00000054588 ENSMUST00000100961,ENSMUST00000065588 3 2 2 80 5 105649020 105649039 AGCTTTACATGGACAAGAGG 59 105648018 105648977 AGACTTCACTTGCCTTCAC 59 NA Nonspecific Mus musculus 50 Smyd1 ENSMUSG00000055027 ENSMUST00000068379,ENSMUST00000114186 2 2 6 80 6 71175509 71187363 TCAACAATGGCAAGATTGAG 58 71175448 71175468 GGAAGTCTATGTAGGACACAG 59 NA Mus musculus 50 Ghr ENSMUSG00000055737 ENSMUST00000110698,ENSMUST00000110697 1 2 3 80 15 3277682 3277987 AGCATGTGAAGAAGGAACC 59 3277620 3277639 CTCTGAAGCTGGTGATACAG 59 NA Mus musculus 50 Chn1 ENSMUSG00000056486 ENSMUST00000112024,ENSMUST00000102677,ENSMUST00000070579 2 3 3 80 2 73456104 73462181 TTTGATAGAGATGGTGAGAAGG 59 73456045 73456063 CAGTTTAAGTGCACCAGTG 58 NA Mus musculus 50 AI842396 ENSMUSG00000057054 ENSMUST00000073625,ENSMUST00000108543,ENSMUST00000108542,ENSMUST00000108541 2 4 4 85 11 70503438 70503699 ATTCCACCAATTCTGAGGG 59 70503371 70503389 CTCCAAAGCTTCTCAGGAG 59 NA Mus musculus 50 Skap1 ENSMUSG00000057058 ENSMUST00000100521 2 1 7 99 11 96592451 96592470 ATTATTACCAGGGCCTATGG 58 96592531 96619946 GAATATGTTCCCTTGCTCAG 58 NA Mus musculus 50 Camk2b ENSMUSG00000057897 ENSMUST00000109815,ENSMUST00000019133,ENSMUST00000109813,ENSMUST00000101585 3 4 10 124 11 5888123 5888141 CATCCTCACCACTATGCTG 59 5882750 5887067 GTAAACTCTTGGCTTGTTCC 59 NA Mus musculus 50 Zfp68 ENSMUSG00000058291 ENSMUST00000110905,ENSMUST00000085852,ENSMUST00000063262,ENSMUST00000110903 3 4 4 125 5 139053274 139053292 GAACTACAGCAACTTGCTG 59 139049040 139053060 TTCTGGAAATCTGGGACAC 59 NA Mus musculus 50 Nrf1 ENSMUSG00000058440 ENSMUST00000115212,ENSMUST00000115211,ENSMUST00000115206,ENSMUST00000115209,ENSMUST00000115200,ENSMUST00000115199,ENSMUST00000069808,ENSMUST00000069831,ENSMUST00000004761 2 9 10 63 6 30066240 30066258 CAGACCGTAGTACAGACCT 59 30066285 30067065 CTGTACCAACCTGGATGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Abi1 ENSMUSG00000058835 ENSMUST00000078977,ENSMUST00000093171,ENSMUST00000114544 3 3 4 81 2 22826652 22826671 CGTCCTGTCAGGTATATTCG 59 22818009 22826610 GGTTATTTCCGTGCTTAACTC 59 NA Mus musculus 50 Grb2 ENSMUSG00000059923 ENSMUST00000106499,ENSMUST00000106500 3 2 5 87 11 115516730 115516749 CCAGAACTGGTATAAGGCAG 59 115508183 115516680 ATTTCCAAACGGATGTGGT 59 NA Mus musculus 50 Tsga10 ENSMUSG00000060771 ENSMUST00000041815,ENSMUST00000114902 2 2 5 80 1 37858618 37858636 CTTATCACTGCTGAAGCAG 58 37840863 37858574 GTTTAGGTGTTGCTCAACC 58 NA Mus musculus 50 1810073N04Rik ENSMUSG00000061306 ENSMUST00000053692 3 1 4 80 11 119989785 119989803 CCTCATCTGCTTTATCTGC 57 119985692 119989741 CATGACTCTAGATCCTGGG 58 NA Mus musculus 50 Kalrn ENSMUSG00000061751 ENSMUST00000114973,ENSMUST00000076810,ENSMUST00000074924 1 3 13 81 16 33989968 33992955 ATCTCCTCCTGTGATTCTG 58 33989905 33989925 CTATGCAGGTATAAATCCCAC 57 NA Mus musculus 50 Sphk1 ENSMUSG00000061878 ENSMUST00000106388,ENSMUST00000106387,ENSMUST00000100201,ENSMUST00000106386,ENSMUST00000063396,ENSMUST00000063446,ENSMUST00000100200 2 7 8 110 11 116396299 116396397 TAAACTGATACTCACCGAACG 59 116396469 116396487 TCATGCATCAGACCATCAC 59 NA Mus musculus 50 Btbd9 ENSMUSG00000062202 ENSMUST00000079924,ENSMUST00000114635 2 2 3 84 17 30661714 30661732 CGGATGCTATTCTTGATGC 58 30654259 30661666 TCTTCAGGTATGAGCATGC 59 NA Mus musculus 50 Cntn4 ENSMUSG00000064293 ENSMUST00000089208,ENSMUST00000113264,ENSMUST00000113261,ENSMUST00000113260,ENSMUST00000079416 2 5 6 80 6 106568390 106605501 TGTGATTGTGAAAGACCCA 59 106605544 106605563 GGAAGAACAATGCTTTCTCC 59 NA Mus musculus 50 OTTMUSG00000008833 ENSMUSG00000066060 ENSMUST00000084312 2 1 1 76 4 118728714 118728732 CAATCCAAAGTGGCAACAG 59 118728656 118728674 GGTATAAATGCAAGAGCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Fkbp15 ENSMUSG00000066151 ENSMUST00000084527,ENSMUST00000084528,ENSMUST00000098033,ENSMUST00000107461 2 4 4 80 4 61985195 61985214 CAACACAACACTGAAATTCG 58 61984327 61985152 TAACTCCTCCACCTTAGTC 57 NA Mus musculus 50 Serpina1a ENSMUSG00000066366 ENSMUST00000072876,ENSMUST00000085056 2 2 2 73 12 105093956 105093974 ATCTGGAGCAAACTCTCAG 58 105093016 105093919 GATCTGGGCTAACCTTCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Akap13 ENSMUSG00000066406 ENSMUST00000065516,ENSMUST00000098366 3 2 4 97 7 82811520 82821995 ATCATCTTCCCAAAGCCTG 59 82822056 82822074 GAAGAATGTCGATCCAGGG 59 NA Mus musculus 50 1700049G17Rik ENSMUSG00000070709 ENSMUST00000098639 3 1 3 189 7 28714416 28714434 TTTGCTGGTGATAACTGCA 59 28705799 28712423 GAAATGCAACTTCCCAACAG 59 NA InUTR Mus musculus 50 4932430I15Rik ENSMUSG00000072828 ENSMUST00000101028 2 1 1 62 5 93237718 93237736 CGCTTGATTCAAGTTTGGT 58 93237674 93237695 GTCTATGGTTACTGTTAAGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Alg6 ENSMUSG00000073792 ENSMUST00000107007,ENSMUST00000097961 3 2 3 82 4 99408237 99408256 ATTTGCTCATTTACGTACCC 58 99408301 99409057 CGCACTAGCAATCTTTCTC 58 NA Mus musculus 50 Tufm ENSMUSG00000073838 ENSMUST00000098048,ENSMUST00000106392 3 2 2 84 7 133632256 133632356 GCTAGCTAAACAGATTGGG 57 133632404 133632422 TAACTCCACCATCTCTGAG 57 NA Nonspecific Mus musculus 50 Pira7 ENSMUSG00000074417 ENSMUST00000108614 1 1 5 101 7 3848617 3848635 ACCAGCGATGGATATTCAG 59 3846969 3848553 CATAGATTCCTGAGACCAGG 58 NA Mus musculus 50 Fat3 ENSMUSG00000074505 ENSMUST00000082170,ENSMUST00000098977 3 2 2 103 9 15749358 15749376 AGAGGACTTCAAGCTAGCT 59 15742893 15749291 TGCCTTCCACAATCTTCAG 59 NA Mus musculus 50 Defb28 ENSMUSG00000074679 ENSMUST00000099204 1 1 1 154 2 152344059 152344077 CTTAGCTGTCCTTGTGGTC 59 152345850 152345868 TTGTTTCTCTGAGACAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Fnbp1 ENSMUSG00000075415 ENSMUST00000113564,ENSMUST00000113562,ENSMUST00000113561,ENSMUST00000073879,ENSMUST00000113560,ENSMUST00000100208,ENSMUST00000075326,ENSMUST00000100207,ENSMUST00000113555 1 9 12 80 2 30892107 30892126 CAGAGTGGACTGTATGATGG 59 30891759 30892064 GTAACTACCATCTGGGCTC 59 NA Nonspecific Mus musculus 50 Fnbp1 ENSMUSG00000075415 ENSMUST00000113564,ENSMUST00000113562,ENSMUST00000113561,ENSMUST00000073879,ENSMUST00000113560,ENSMUST00000100208,ENSMUST00000075326,ENSMUST00000100207,ENSMUST00000113555 3 9 12 80 2 30892107 30892126 CAGAGTGGACTGTATGATGG 59 30891759 30892064 GTAACTACCATCTGGGCTC 59 NA Nonspecific Mus musculus 50 0610010B08Rik ENSMUSG00000078885 ENSMUST00000109006,ENSMUST00000109005 3 2 3 95 2 176086439 176086460 GACCTATAAGAATCTCACAGCT 59 176085002 176086178 CTTTCATGCCTTCCATGAC 58 NA Nonspecific Mus musculus 50 0610010B08Rik ENSMUSG00000078897 ENSMUST00000109046,ENSMUST00000109045,ENSMUST00000099013 3 3 3 80 2 175250576 175250595 ATCCTTCTCAGAAGAGTCTC 57 175250310 175250536 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 Cpt1b ENSMUSG00000078937 ENSMUST00000109313,ENSMUST00000052315 3 2 2 80 15 89254140 89254158 GAATTCCAGGACAAGACTG 57 89253992 89254098 GTCACTCACATAGTTAGTTGC 58 NA Mus musculus 50 mmu-mir-383 ENSMUSG00000065457 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-539 ENSMUSG00000076063 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Scnn1g ENSMUSG00000000216 ENSMUST00000000221 1 1 1 81 7 128890196 128890214 TACCCTTTCATCGAAGACG 59 128890259 128903917 TGAAGGATTCTGTCAGGTG 58 NA Mus musculus 50 Rab5b ENSMUSG00000000711 ENSMUST00000000727 1 1 1 80 10 128118532 128119895 CATGGTGGAGTATGAAGAGG 59 128118471 128118491 ATAGCAGTCTTAGCTGAAGTC 59 NA Nonspecific Mus musculus 50 Oprm1 ENSMUSG00000000766 ENSMUST00000105615,ENSMUST00000105614,ENSMUST00000105611,ENSMUST00000063036,ENSMUST00000052751,ENSMUST00000105609,ENSMUST00000105607,ENSMUST00000056385,ENSMUST00000092734,ENSMUST00000105597,ENSMUST00000105605,ENSMUST00000092729,ENSMUST00000105604,ENSMUST0 2 18 21 76 10 3517318 3517336 TAATGTTCATGGCAACCAC 58 3516521 3516539 GTACCATGTGGGATGAGAG 59 NA DesignNoJunction Mus musculus 50 Top1mt ENSMUSG00000000934 ENSMUST00000000958 2 1 1 80 15 75500539 75500557 GAGATCCATAAGCACTTCC 57 75499890 75500495 CTCTTCCTTTAGCTTCTGC 57 NA Mus musculus 50 Ap4e1 ENSMUSG00000001998 ENSMUST00000002063,ENSMUST00000110394,ENSMUST00000110393,ENSMUST00000110392 2 4 4 80 2 126840021 126845032 AAAGAGTGGGTTATTTGGCT 59 126845072 126845093 TTACCACTGTATTCACAAGGAG 59 NA Mus musculus 50 Foxn1 ENSMUSG00000002057 ENSMUST00000108294,ENSMUST00000002126 1 2 2 80 11 78179535 78180383 CATCTACTCTTACAGCATCC 57 78179474 78179493 TTGTAGATTTCACTGACTGG 57 NA Mus musculus 50 Ddb2 ENSMUSG00000002109 ENSMUST00000111352,ENSMUST00000099721,ENSMUST00000028696 2 3 3 80 2 91052660 91052678 GATGTGTTTGATGGAAGCT 58 91052474 91052618 CTCATTGAGCGAAGTAATACC 58 NA Mus musculus 50 Ocel1 ENSMUSG00000002396 ENSMUST00000002469 1 1 1 216 8 73895884 73896384 TTAAGTACCCACCAGTGAC 58 73896679 73896697 CGCTTCTTCTCAAACTCTC 58 NA DesignNoJunction Mus musculus 50 Abcf3 ENSMUSG00000003234 ENSMUST00000003319 3 1 1 80 16 20559384 20559405 GAAATCTACTATGCTGAAGCTG 58 20559446 20559725 ATCTTCAGATTCCTGTGGG 58 NA Mus musculus 50 As3mt ENSMUSG00000003559 ENSMUST00000003655 2 1 1 95 19 46782601 46782619 GACTAATGCTTGTGTCACG 58 46782675 46783466 CCATAATACCTCGAACTAACGT 59 NA Mus musculus 50 Psg19 ENSMUSG00000004542 ENSMUST00000004657,ENSMUST00000081213 3 2 2 181 7 19377918 19377938 GACAGAGTCTATCATCAGTGG 59 19375672 19377775 GTGTCACAAGCTTGTTCAC 59 NA Mus musculus 50 Slbp ENSMUSG00000004642 ENSMUST00000075670,ENSMUST00000057551 1 2 3 145 5 33992485 33994619 CCTGAAAGCTTTACAACTCC 58 33988686 33988705 CCAAAGTCGTTTATGAGCAG 59 NA Mus musculus 50 Hdac9 ENSMUSG00000004698 ENSMUST00000085463 1 1 4 80 12 34900337 34900356 GCATCCTGTACATTTCACTC 58 34899964 34900294 CTACTCCAACCTCATTCGG 59 NA Nonspecific Mus musculus 50 Slc4a3 ENSMUSG00000006576 ENSMUST00000027415,ENSMUST00000113545,ENSMUST00000006751 1 3 3 80 1 75551264 75551509 TCTACAAGGTGTTCACAGAG 58 75551551 75551570 TATTCAGTTCCAAGCCAGTC 59 NA Mus musculus 50 Atp1a4 ENSMUSG00000007107 ENSMUST00000111243,ENSMUST00000007346 1 2 2 80 1 174181466 174181484 CCTAGTAGAGGTGAAGGGA 58 174181124 174181423 GAATTGTCTACCTTGCATCC 58 NA Mus musculus 50 Zfp775 ENSMUSG00000007216 ENSMUST00000061720 1 1 1 66 6 48569708 48569726 ACAGCACCTACTTAAGCAC 59 48569756 48569774 CTCACATTCTGGACATGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Homer1 ENSMUSG00000007617 ENSMUST00000109494 1 1 10 91 13 94126023 94156306 ATTTCCACATAGTGCTGGG 59 94156361 94156379 GACACATTGAGACTGGAGG 59 NA InUTR Mus musculus 50 4931407G18Rik ENSMUSG00000007907 ENSMUST00000008051 3 1 1 60 5 88409457 88409478 CGAGGTATGACTTTATTGTCAC 58 88409498 88409517 ACATGTGATTCCTCCATGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mlkl ENSMUSG00000012519 ENSMUST00000056157 1 1 1 80 8 113846690 113851722 AGTGTTGGAATAGTGAGGT 57 113846628 113846646 TATACGCAAGATGTTGGGA 58 NA Mus musculus 50 Tnfaip8l2 ENSMUSG00000013707 ENSMUST00000013851 1 1 1 60 3 94944320 94944338 GTCCAAAGAATACACGCAC 59 94944278 94944298 CTTGATGAGGTCTTTGATCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Map3k4 ENSMUSG00000014426 ENSMUST00000089058,ENSMUST00000074585 2 2 2 80 17 12463776 12463795 TAAGCTTATGAATGGGTCCT 58 12457001 12463733 GGAAAGTCAGAGAACTCCA 58 NA Mus musculus 50 Pdcd2 ENSMUSG00000014771 ENSMUST00000054450 2 1 1 80 17 15659812 15659831 ACGAATCCAAGGAAGATCAC 59 15658978 15659770 TTCCATACCTGAGAATCTGC 59 NA Mus musculus 50 Lpl ENSMUSG00000015568 ENSMUST00000015712 2 1 1 81 8 71420668 71420686 GAGATCAACAAGGTCAGAG 57 71420731 71423324 AATGGAACACTTTGTAGGG 57 NA Mus musculus 50 Gats ENSMUSG00000015944 ENSMUST00000016088 2 1 1 80 5 134613409 134613916 GGGATTTGATGAATGTGGG 58 134613958 134613978 GTACTGATGTAATATGCTGGG 57 NA Mus musculus 50 Kctd2 ENSMUSG00000016940 ENSMUST00000103035,ENSMUST00000106534,ENSMUST00000106533 2 3 3 82 11 115288777 115288795 CAGTGTCAAGAGGAAGAGC 59 115288840 115290610 GAGCCAATGCTGATTAACTG 59 NA Mus musculus 50 Smurf2 ENSMUSG00000018363 ENSMUST00000100310,ENSMUST00000092517,ENSMUST00000103067 1 3 3 80 11 106732857 106732877 TGCCATTCTACAGATACTGTG 59 106729964 106732818 ATCAGACTTTCCGATATACAGG 59 NA Mus musculus 50 Eapa2 ENSMUSG00000018656 ENSMUST00000069023 2 1 1 86 6 42543283 42543301 CAGATCTCAGCTACTTCCC 58 42542936 42543233 GAGTTGTCATTGTCTGTGC 59 NA Mus musculus 50 OTTMUSG00000000990 ENSMUSG00000018925 ENSMUST00000019069 3 1 1 81 11 83325951 83326348 AATCATCTCTTTGGGTGCC 59 83325888 83325906 GGTCTCTTCTGCATCTAGC 59 NA Mus musculus 50 Atp6ap1 ENSMUSG00000019087 ENSMUST00000019231,ENSMUST00000114171,ENSMUST00000114168 3 3 3 80 X 71548600 71548708 GACATTCAAGTTCATTCTGGC 59 71548750 71548768 TGGATTTCAAGTCGTTCCA 59 NA Mus musculus 50 Ap4m1 ENSMUSG00000019518 ENSMUST00000019662 3 1 1 83 5 138614230 138614248 CTCACTCAATGAGGGAACC 59 138614294 138615994 TGCACATAGCCATAATCCAG 59 NA Mus musculus 50 Mtrf1l ENSMUSG00000019774 ENSMUST00000019908 1 1 1 84 10 4526451 4526470 TTAAAGAAACTTGCGGAGAG 58 4526514 4527575 GAACCAACAGTGAGATAATCTG 58 NA Mus musculus 50 Hbs1l ENSMUSG00000019977 ENSMUST00000020153,ENSMUST00000092674 1 2 2 81 10 21024435 21027394 GTGAAATTGACCAAGCTCG 59 21027439 21027457 AGTATGTCATCAGGCACAG 59 NA Nonspecific Mus musculus 50 Tmcc3 ENSMUSG00000020023 ENSMUST00000065060 1 1 1 80 10 94042020 94042039 CTGAAGGTGCAGTTTAAGAG 58 94042082 94045034 TTCAAGTCGCTCATACCTG 59 NA Mus musculus 50 Aldh1l2 ENSMUSG00000020256 ENSMUST00000020497 3 1 1 80 10 82978920 82981099 TCAATGGACAGATGGTGAC 59 82978858 82978878 CTCTAATGTCCAGTGGTTCTC 59 NA Nonspecific Mus musculus 50 Theg ENSMUSG00000020317 ENSMUST00000020566,ENSMUST00000077433 2 2 2 93 10 79046545 79046564 GGAGTACCAAGCTTCTAACC 59 79042832 79046489 GACTTGGGAAACCTCAGAC 59 NA Mus musculus 50 Sar1b ENSMUSG00000020386 ENSMUST00000020653 2 1 1 103 11 51593222 51593240 CCTTGGATTGGATAATGCC 58 51593307 51596288 TAAGCTCTTCTGAAGTGGG 58 NA Mus musculus 50 0610010K14Rik ENSMUSG00000020831 ENSMUST00000081826,ENSMUST00000108578,ENSMUST00000102569 3 3 9 105 11 70049296 70049537 AACAGAAGGCTGATGTGAC 59 70049209 70049227 TTGAGTTTCTTGGCTGGAG 59 NA Nonspecific Mus musculus 50 Cdkl1 ENSMUSG00000020990 ENSMUST00000021377 1 1 1 80 12 70855160 70855178 GCACCAGCAAGTATTTAGC 59 70851748 70855117 AACTCAAGTGTTTCCATGTC 58 NA Mus musculus 50 Lman2 ENSMUSG00000021484 ENSMUST00000021940 1 1 1 95 13 55452577 55452596 GAACTGCATTGACATCACAG 59 55449780 55452519 ATGATGTCGTGGTTGTCAG 59 NA Mus musculus 50 Srd5a1 ENSMUSG00000021594 ENSMUST00000091514 1 1 2 234 13 69733846 69733867 GATAAATATCCACTCAGACCAC 58 69714065 69725471 GAGGTACCACTGATGATGC 59 NA DesignRelaxed Mus musculus 50 Fgf10 ENSMUSG00000021732 ENSMUST00000022246 2 1 1 92 13 119570326 119570344 AACATCAGTGGAAATCGGA 58 119570399 119577927 TTTGAGCCATAGAGTTTCCC 59 NA DesignNoJunction Mus musculus 50 Il6st ENSMUSG00000021756 ENSMUST00000070731 2 1 1 80 13 113280839 113283804 CATACGAAGACAGACCATCC 59 113283844 113283865 GTACAGATCTATATTCCTGCCC 59 NA Mus musculus 50 Pcdh21 ENSMUSG00000021803 ENSMUST00000022337 1 1 1 80 14 37905182 37905200 AGCAGCATCTTTAAGGTCC 59 37903877 37905138 GTGTAGGTTCTGAAGGGAG 58 NA Mus musculus 50 Adam2 ENSMUSG00000022039 ENSMUST00000022618 3 1 1 81 14 66659130 66661892 CTATTTGGCATCGATGCAG 59 66659067 66659085 CACAGCTCCCAGATATGTC 59 NA Mus musculus 50 C6 ENSMUSG00000022181 ENSMUST00000022788 2 1 1 80 15 4748370 4748389 ACCATCAAGGTATACATGCA 58 4748432 4753632 TCTCTGACACCTTGTTCAC 59 NA Mus musculus 50 Matn2 ENSMUSG00000022324 ENSMUST00000022947 3 1 1 80 15 34352151 34352169 GTGAAGACTCTTTCGTGTG 58 34352213 34353460 AGACATCTTTCCTTCTGCA 58 NA Mus musculus 50 L3mbtl2 ENSMUSG00000022394 ENSMUST00000023029 1 1 1 80 15 81512569 81513007 ATCAAGATGTCAGACAGACG 59 81513049 81513068 GAGGTAAGGTACAGCATCAC 59 NA Mus musculus 50 C1qtnf6 ENSMUSG00000022440 ENSMUST00000023075 3 1 1 95 15 78357725 78357743 GTCCTCTGATGATACGGTC 58 78355819 78357666 CCTTTGTCACCCTTTAGGA 58 NA Mus musculus 50 Rhpn1 ENSMUSG00000022580 ENSMUST00000023244 3 1 1 88 15 75539667 75539686 CGAAGGGATTACTATTCCCA 58 75539737 75540456 CAGAGATCAGCTCCTTCAG 59 NA Mus musculus 50 App ENSMUSG00000022892 ENSMUST00000074271,ENSMUST00000114177,ENSMUST00000005406 2 3 3 83 16 84965964 84965982 TCTCGGAAGTGAAGATGGA 59 84963098 84965917 CTTCAGCAAAGAACACCAG 58 NA Mus musculus 50 4930415O20Rik ENSMUSG00000022993 ENSMUST00000023728 3 1 1 122 15 98419021 98419039 TCAGAACTTCAGCTTCTGG 59 98419125 98419857 GAATGGTCCACAAATCTGG 58 NA Mus musculus 50 Dtwd1 ENSMUSG00000023330 ENSMUST00000110437 1 1 1 80 2 125985702 125985721 TTGTCTTTATTGACAGCACC 58 125985761 125990480 GTTCAACTTGTAATAACTCCCG 59 NA Mus musculus 50 D030013I16Rik ENSMUSG00000023795 ENSMUST00000077550 1 1 1 84 17 3080922 3080940 ATCCTCTACTACCTCCTGC 59 3079579 3080874 TATACAGGAACACCCTGCT 59 NA Nonspecific Mus musculus 50 Dhx16 ENSMUSG00000024422 ENSMUST00000025292 3 1 1 84 17 36028022 36029372 TTCATGAGACAAGTACTGGAG 59 36029418 36029436 GATCTTCTAGCTCCTTGGC 59 NA Mus musculus 50 Impact ENSMUSG00000024423 ENSMUST00000025290 2 1 1 82 18 13143759 13143777 CGTTCCTATTACTGACCGA 58 13143823 13144848 CAAGAACCAGTTTCACCTG 58 NA Mus musculus 50 Tmc1 ENSMUSG00000024749 ENSMUST00000039500,ENSMUST00000025658 3 2 2 125 19 20870096 20870114 TTGAAGTCATCGGTGAGAC 59 20864344 20870009 GATAATAGATGGTCAGGACCA 58 NA Mus musculus 50 Uhrf2 ENSMUSG00000024817 ENSMUST00000025739,ENSMUST00000112552 2 2 2 76 19 30113731 30113749 CAGCCATCTACATCAGCTC 59 30113787 30130744 GCATCCACCAATTCATTTACC 59 NA DesignNoJunction Mus musculus 50 Rce1 ENSMUSG00000024889 ENSMUST00000025823 1 1 1 150 19 4624759 4625026 TGCTGCTAACTATGATCCT 57 4624124 4624142 ATAACTTGGTTTCGTAGCC 57 NA Mus musculus 50 Map4k2 ENSMUSG00000024948 ENSMUST00000025897 3 1 1 80 19 6344419 6344439 TTTCCAGATACCATCCATTCC 59 6344480 6344603 TTTCACTTGGTGAAACTGGA 59 NA Mus musculus 50 Esrra ENSMUSG00000024955 ENSMUST00000113432,ENSMUST00000025906 3 2 2 153 19 6986970 6986988 TGGTCCTAGATGAAGAGGG 59 6986491 6986853 TGCACAGAGTCAGAATTGG 59 NA DesignRelaxed Mus musculus 50 Taf5 ENSMUSG00000025049 ENSMUST00000026027 1 1 1 80 19 47153378 47155039 GTCCGGATAGGAACTACCT 59 47155083 47155101 CCAAGCAAGTGAAAGTCTG 58 NA Mus musculus 50 Mms19 ENSMUSG00000025159 ENSMUST00000026168 3 1 1 81 19 42026942 42026961 CTGGTATTTCCACAAGACAG 58 42025325 42026899 AACTGAGGATTCCTTCTCTG 58 NA Mus musculus 50 Slc6a20 ENSMUSG00000025243 ENSMUST00000026273 2 1 1 85 9 123516699 123516717 CTCATCATCTACCTGGTCC 58 123514057 123516650 AGCTGCTCAATCTTAGGTG 59 NA Mus musculus 50 Rhbdl1 ENSMUSG00000025735 ENSMUST00000026831 1 1 1 82 17 25972962 25972980 CTGGTACTTCTACAGGCAC 59 25972823 25972916 ACAGGAACACGATGATCTG 59 NA Mus musculus 50 Trak2 ENSMUSG00000026028 ENSMUST00000027186,ENSMUST00000057069 2 2 2 80 1 58975658 58975679 GAAGGAAGAACTAAGACTTCAC 58 58972651 58975618 TCCTGTAACTCATGAAGCTC 59 NA Mus musculus 50 Slc45a3 ENSMUSG00000026435 ENSMUST00000065693,ENSMUST00000027695 1 2 2 121 1 133874764 133875332 ACTATGATGAAGGCATTCGA 58 133875416 133875434 CAGATAGACTGACCGTGTG 59 NA Mus musculus 50 5830417C01Rik ENSMUSG00000026502 ENSMUST00000027783 1 1 1 80 1 180174605 180179377 TTATCAGAGATTCTCTGTGGG 58 180179418 180179437 TAGAAAGGGTATACAGGAGC 57 NA Mus musculus 50 Slamf9 ENSMUSG00000026548 ENSMUST00000027830 3 1 1 86 1 174407535 174407553 CCTATACTTGCAGGGTCAG 59 174407602 174408202 GATATCCAGGATCTGCACAG 59 NA Mus musculus 50 Bfsp1 ENSMUSG00000027420 ENSMUST00000099296,ENSMUST00000028907 1 2 2 90 2 143674727 143674745 CTTATTGCGTAACCTGCAC 59 143671718 143674676 CAGAAGATTCTTCTTGTACCTG 58 NA Mus musculus 50 Ptgfrn ENSMUSG00000027864 ENSMUST00000102694 2 1 1 98 3 100860569 100864568 CCTCAGAAGATTCTGTGCT 58 100860489 100860507 TCTTGGAAGACACTTTGCA 59 NA Mus musculus 50 Pmf1 ENSMUSG00000028066 ENSMUST00000056370,ENSMUST00000090958 1 2 3 68 3 88203666 88203684 GACGCAGAGGATCTATGAC 59 88203141 88203634 ATTTCTGAGATTTCCTCGC 57 NA DesignNoJunction Mus musculus 50 Chd1l ENSMUSG00000028089 ENSMUST00000029730 1 1 1 80 3 97386689 97386707 ACATGGTCATAGAAGGAGG 58 97385088 97386648 GAATCTCACTTAACTGGAAGTC 58 NA Mus musculus 50 Nbn ENSMUSG00000028224 ENSMUST00000029879 2 1 1 80 4 15903241 15903259 ATAATCCCAAGTGCTCCAG 59 15903301 15906297 CAAAGGCATACATGTATCTGC 59 NA Mus musculus 50 Tnc ENSMUSG00000028364 ENSMUST00000030056,ENSMUST00000107372,ENSMUST00000070019,ENSMUST00000107379,ENSMUST00000107377,ENSMUST00000107375,ENSMUST00000107374,ENSMUST00000107371 1 8 8 60 4 63676191 63677881 GATAGACTGCTCTGAGGTG 58 63676149 63676169 CTCCTCTGTTACTTCTGTCAC 59 NA DesignNoJunction Mus musculus 50 Ptprd ENSMUSG00000028399 ENSMUST00000107289,ENSMUST00000072540,ENSMUST00000050757,ENSMUST00000098005,ENSMUST00000084471,ENSMUST00000107287,ENSMUST00000084467 3 7 9 92 4 75889606 75889627 GATGAGGCCATTTATGAATGTG 59 75786593 75889553 AGGAATCTGATCCTCACGT 59 NA Mus musculus 50 Adfp ENSMUSG00000028494 ENSMUST00000000466 3 1 1 82 4 86304610 86306000 GTCCACCTGATTGAATTCG 58 86304546 86304567 GAGACATAGAGCTTATCCTGAG 59 NA Mus musculus 50 Lrp8 ENSMUSG00000028613 ENSMUST00000106734,ENSMUST00000106733,ENSMUST00000106732,ENSMUST00000106731,ENSMUST00000030356 2 5 5 80 4 107523967 107523985 TCAAGATCGGCTTTGAGTG 59 107524029 107524119 GGCATTCATCAATGTCACC 59 NA Mus musculus 50 Ccdc23 ENSMUSG00000028643 ENSMUST00000030395,ENSMUST00000097908 3 2 3 88 4 118868548 118868567 TAAAGAACCAGCCTTCAGAG 59 118868617 118873511 GAGCATAGATCTCTGCTCTC 59 NA Mus musculus 50 1110049F12Rik ENSMUSG00000028669 ENSMUST00000105851,ENSMUST00000030428 2 2 2 85 4 135541906 135541924 CAATGTCAAGCTGAAAGGC 59 135534800 135541859 GTGGAATGTTCTTGTACAGTC 58 NA Mus musculus 50 Toe1 ENSMUSG00000028688 ENSMUST00000106455,ENSMUST00000030451 1 2 2 95 4 116478340 116478598 AATGACAAGGGAGATGAGAG 58 116478264 116478282 AAGGCCATTATGTAGCACC 59 NA Nonspecific Mus musculus 50 Dmbx1 ENSMUSG00000028707 ENSMUST00000064806,ENSMUST00000084338 3 2 2 81 4 115593191 115593209 ACTCATTACCCAGATGTGG 58 115592912 115593146 TAAACCACACCTGTACACG 59 NA Mus musculus 50 Tekt2 ENSMUSG00000028845 ENSMUST00000102616,ENSMUST00000030658 1 2 2 85 4 126001525 126001543 AGGTGGAAGTCATTGAAGC 59 126001011 126001476 AATTTCCTGCAGGAGACAG 59 NA Mus musculus 50 Ube4b ENSMUSG00000028960 ENSMUST00000103212,ENSMUST00000084123 1 2 2 80 4 148747071 148755302 TCGTTGTCTAGTTTGGGAG 58 148747009 148747027 TTTGCAGGTTTCAATGGTG 59 NA Mus musculus 50 Ppm1g ENSMUSG00000029147 ENSMUST00000031032 3 1 1 80 5 31508459 31508477 GTCCAAGTTCTTTGAGGAC 57 31507489 31508415 TCCTCACTACATTCCTCAC 57 NA Mus musculus 50 Smr2 ENSMUSG00000029281 ENSMUST00000094636 2 1 4 81 5 88534394 88537550 TAGGATGCTTCCTTTCTAGTG 58 88537591 88537611 GGATTTGAAGGAGATAGTGGT 59 NA Mus musculus 50 Rnf34 ENSMUSG00000029474 ENSMUST00000031434 1 1 1 86 5 123311909 123314006 GAAAGAAGCATGTCTGCTG 59 123314056 123314074 AAGTAGAACATCTGCGGAG 59 NA Mus musculus 50 4930434E21Rik ENSMUSG00000029658 ENSMUST00000110502,ENSMUST00000085533,ENSMUST00000031665 2 3 3 80 5 150383227 150383248 GTGTCAGAATTTATTGGCACTC 59 150383289 150383389 AGTAACAAGCCTTCTTCCG 59 NA Mus musculus 50 1700111E14Rik ENSMUSG00000029837 ENSMUST00000031863 3 1 1 83 6 36888798 36924722 AACTCAAAGGATCACGGTC 59 36924769 36924787 GGAGTTATCTGGACAAGCC 59 NA Mus musculus 50 Mkrn1 ENSMUSG00000029922 ENSMUST00000114823,ENSMUST00000031985,ENSMUST00000051671,ENSMUST00000114822 2 4 4 104 6 39360156 39360175 CGATACTCTCATGACCTCTC 58 39355944 39360089 CTTGCTGTGTTCGTATCTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Plcz1 ENSMUSG00000030230 ENSMUST00000032356,ENSMUST00000032355 1 2 2 94 6 139976912 139976930 GTTTCTAACCCAAGAGCAG 58 139971832 139976856 CACCCTTTACTTCTTCAATGG 58 NA Mus musculus 50 Ogg1 ENSMUSG00000030271 ENSMUST00000032406 1 1 1 143 6 113278599 113279233 ATTCCAAGGTGTGAGACTG 59 113279340 113279358 TCAAGCTGAATGAGTCGAG 59 NA Mus musculus 50 Zdhhc13 ENSMUSG00000030471 ENSMUST00000032662 1 1 1 80 7 56074076 56077944 ATGGATCTTTCGTCTACTGG 58 56077985 56078005 CTATCTGATTGAGGTAGGTCC 58 NA Mus musculus 50 Uros ENSMUSG00000030979 ENSMUST00000106145,ENSMUST00000106146,ENSMUST00000033276 3 3 4 80 7 140881357 140882204 ACTATGAAGATCAGGGTATCC 58 140881297 140881315 CCTGAATATACTCGAGGCT 57 NA Mus musculus 50 Mrps31 ENSMUSG00000031533 ENSMUST00000033934 3 1 1 80 8 23538298 23538317 TTGAGGAGATGATACAGTGG 58 23538360 23539667 CATCGTCATCTAAACCTGC 58 NA Mus musculus 50 Adat1 ENSMUSG00000031949 ENSMUST00000034427,ENSMUST00000070921 1 2 2 96 8 114513810 114514113 AAGTGCAAGTGACAAAGGA 59 114511759 114511777 CTGTCATTGAGGATGTCCC 59 NA Mus musculus 50 Ankrd25 ENSMUSG00000032194 ENSMUST00000034717 3 1 2 111 9 21579191 21580157 AGAGCGAGAACTGAAAGTG 59 21579098 21579117 CCTGAAGGTGACTAGATGTC 59 NA Mus musculus 50 Lrrc1 ENSMUSG00000032352 ENSMUST00000049755,ENSMUST00000113421,ENSMUST00000113419 1 3 3 80 9 77316408 77316429 CAGAACTTAACGTGTCTTTCTG 59 77305919 77316369 AGCCAGGTTATAGAGATTTCC 58 NA Mus musculus 50 Clstn2 ENSMUSG00000032452 ENSMUST00000035027 1 1 1 82 9 97471118 97482884 CAGAAATGGCAACATCAGG 59 97471054 97471072 AGTCATAAGCGGTTACCAG 59 NA Mus musculus 50 Mobp ENSMUSG00000032517 ENSMUST00000035103 1 1 5 87 9 120077050 120077068 AGTACAGCATCTGCAAGAG 59 120077117 120089157 AACGTCATACTAGTCTTCTGG 58 NA Mus musculus 50 Atxn2l ENSMUSG00000032637 ENSMUST00000040202 1 1 1 80 7 133644666 133644685 TCTACTTGTGACGTAAAGGT 58 133644376 133644623 TGCCAGTTCAAACTTTGAG 58 NA Mus musculus 50 Cyb5r4 ENSMUSG00000032872 ENSMUST00000113151 3 1 2 87 9 86935227 86935245 CAAGAGCCAAATGTCAGAC 58 86935295 86936100 GAACCAATCATAGCTTGGAG 58 NA Mus musculus 50 Senp1 ENSMUSG00000033075 ENSMUST00000044189 2 1 1 80 15 97878668 97878688 AAGAAGGTGGATGTATTCTCC 59 97877695 97878627 GTCTACAACAGCTAGACACC 59 NA Mus musculus 50 AA467197 ENSMUSG00000033213 ENSMUST00000047498,ENSMUST00000110512 1 2 2 87 2 122464071 122464962 GACGTGGTTATTGATCGGA 59 122465012 122466455 GCTGGTTGATGGTTATAAGC 58 NA Mus musculus 50 ENSMUSG00000033219 ENSMUSG00000033219 ENSMUST00000035980 1 1 1 80 5 14911513 14912162 CACATTTCTATCGTAACCTGC 59 14911453 14911471 CCTGCTGTAATGTCATCGA 59 NA Mus musculus 50 Map2k4 ENSMUSG00000033352 ENSMUST00000108694 3 1 2 171 11 65589247 65601638 GGCTTTCAGATAAACTTCTGTG 59 65548834 65548852 CTGATGACTCAATGCTGTG 58 NA DesignNoJunction Mus musculus 50 C530043G21Rik ENSMUSG00000033557 ENSMUST00000086153 1 1 1 80 1 158628909 158628928 ATATGTTAATCTGCGGACAG 57 158620770 158628868 GTATTGTTCCCTACAGTTAGG 57 NA Mus musculus 50 6330503K22Rik ENSMUSG00000033904 ENSMUST00000106557,ENSMUST00000038650 1 2 2 90 7 125868898 125868916 AGACAAAGAACCGATTCTG 57 125868969 125869531 CAGAAGTTATGAAGCCAGAG 57 NA Mus musculus 50 Mks1 ENSMUSG00000034121 ENSMUST00000038196 1 1 1 80 11 87670372 87670390 ACAACCACGCTATTAACAC 58 87670434 87670702 CCTTATAGCCAAGCTTTCC 57 NA Mus musculus 50 Ccdc131 ENSMUSG00000034163 ENSMUST00000036044 1 1 1 80 10 114852783 114853800 CCAATTAAGTACGCCTTCC 58 114853844 114853862 TCTAACATCGTCTGGAGTG 58 NA Mus musculus 50 Foxj1 ENSMUSG00000034227 ENSMUST00000036215 3 1 1 80 11 116195378 116195396 ACAACTTCTGCTACTTCCG 59 116193752 116193770 TGAAGCACTTGTTCAAGGA 59 NA DesignNoJunction Mus musculus 50 Scn10a ENSMUSG00000034533 ENSMUST00000084787 2 1 1 80 9 119560199 119567535 CTTCTGTCATTGAGGAGCT 58 119560137 119560156 ATATCAGGTACTTCTGGGCT 59 NA Mus musculus 50 Pabpc5 ENSMUSG00000034732 ENSMUST00000040961,ENSMUST00000113366,ENSMUST00000113368 3 3 3 60 X 117041654 117041673 TGTATGTAGGTGACTTGGAC 58 117041694 117041714 GGTCTGAACTTCTTATAGAGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ints6 ENSMUSG00000035161 ENSMUST00000053959 3 1 1 80 14 63328454 63332538 AGAATTCTCCAACACTACCAC 59 63328394 63328413 CAATAACCATTGGCTCACAG 59 NA Mus musculus 50 Midn ENSMUSG00000035621 ENSMUST00000042057,ENSMUST00000099492 1 2 2 80 10 79617210 79617889 CTTCTCTGGCACACTACAC 59 79617933 79617951 AGTATCTGCAGAATGGTGC 59 NA Mus musculus 50 Sostdc1 ENSMUSG00000036169 ENSMUST00000041407 3 1 1 63 12 37041030 37041048 GAATCAAGCCAGGAATGGA 59 37041075 37043626 AACTCGACTGTTTCGATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Calm3 ENSMUSG00000036438 ENSMUST00000040440 3 1 1 80 17 87834541 87834951 TTGATAAGGATGGCAATGG 57 87834479 87834497 CATCTGTTAACTTCTCGCC 58 NA Nonspecific Mus musculus 50 Eea1 ENSMUSG00000036499 ENSMUST00000053484,ENSMUST00000105288 3 2 2 81 10 95486616 95486635 ACCTTAAGGATCACAAGGAG 58 95486676 95488676 GCTTCTAGTTTCTTAATGTGGC 59 NA Mus musculus 50 Etl4 ENSMUSG00000036617 ENSMUST00000114627,ENSMUST00000114620,ENSMUST00000114619,ENSMUST00000045555,ENSMUST00000114614,ENSMUST00000114609,ENSMUST00000066509,ENSMUST00000114607,ENSMUST00000114608,ENSMUST00000114606 3 10 12 193 2 20719650 20720252 ATGTCTAAGGTGAGCAGTG 58 20720409 20723185 GAACACTTCTGGAATGCCT 59 NA Mus musculus 50 Klhl13 ENSMUSG00000036782 ENSMUST00000115313,ENSMUST00000035973,ENSMUST00000115319,ENSMUST00000115317,ENSMUST00000115316 1 5 5 80 X 22812404 22812422 CTTCTTCCACCTAAGTGCC 59 22805804 22812360 TCCACAGTAGGGAGTTCTC 59 NA Mus musculus 50 4932438A13Rik ENSMUSG00000037270 ENSMUST00000057272,ENSMUST00000039493,ENSMUST00000099134 1 3 3 80 3 36937570 36938207 CTGTAAACTTGCCAACATCTG 59 36938248 36938267 TTGATGATTCGGGAGAAAGG 59 NA Mus musculus 50 Htra4 ENSMUSG00000037406 ENSMUST00000084031 1 1 1 80 8 26144225 26147473 GATCGAGCCAGATACTGAG 59 26144163 26144182 AAAGCTACCACAAACTCTCC 59 NA Mus musculus 50 Shank2 ENSMUSG00000037541 ENSMUST00000105900,ENSMUST00000084391,ENSMUST00000097929 3 3 3 145 7 151584158 151591244 AGAAGAAGGATAAACCGGA 57 151591353 151593031 CACGGAATTCACATCAGAG 58 NA Mus musculus 50 Mynn ENSMUSG00000037730 ENSMUST00000047502,ENSMUST00000047495 3 2 2 89 3 30512548 30515478 AAGGTCCATTCTGGTACTG 58 30515531 30515549 CAAGGGACTTCTCTGTACG 59 NA Mus musculus 50 2810032G03Rik ENSMUSG00000037735 ENSMUST00000037953 2 1 1 89 12 5421828 5421846 TTGCAGAAGGAAGAGACAC 59 5421898 5421917 TCATTTATGAGTTTGCACGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Slc32a1 ENSMUSG00000037771 ENSMUST00000045738,ENSMUST00000109483 2 2 3 88 2 158437350 158439553 GTGACAAATGCCATTCAGG 59 158439604 158439623 AAGATGATGAGGAACAACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rtkn2 ENSMUSG00000037846 ENSMUST00000105437,ENSMUST00000068994 2 2 2 101 10 67450228 67450246 GATTGCAAATCAAACCGGA 59 67460363 67464681 ATTCGGATATCTGACAGGG 58 NA Mus musculus 50 Chchd5 ENSMUSG00000037938 ENSMUST00000035481 3 1 1 99 2 128956020 128956039 CTTAAGATGAGCATTGCTCG 59 128956183 128956201 GAAGACACTTCTCAAAGGC 58 NA DesignNoJunction Mus musculus 50 Cramp1l ENSMUSG00000038002 ENSMUST00000024982 2 1 2 79 17 25148343 25150623 TATCCTTGGCAGTTTCTCTG 59 25148283 25148303 TTCTCCATAAGTCACTCTTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Igsf8 ENSMUSG00000038034 ENSMUST00000085912,ENSMUST00000039506 2 2 2 62 1 174246610 174246628 CACAGATACGCAGTACCTG 59 174246653 174247498 TCATCTGGAAGAACTCTCAG 58 NA DesignRelaxed Mus musculus 50 Npy6r ENSMUSG00000038071 ENSMUST00000042747 2 1 1 60 18 44435628 44435646 GGATCATCTTGATTTGGCT 57 44435670 44435688 TGGTAGGACAGGAATAAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 9130019P16Rik ENSMUSG00000038091 ENSMUST00000046683 1 1 1 60 6 54374886 54374907 CCATGATGATAATGATGGTGAG 58 54374847 54374865 CTTGACGGGAAAGTAAGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 D1Ertd53e ENSMUSG00000038174 ENSMUST00000097724,ENSMUST00000038372 2 2 2 80 1 58609169 58614130 GATTCAAACAATGAGCTCCT 58 58609108 58609127 CCTCTTAAGTCGAACTTCAG 57 NA Mus musculus 50 Pak1ip1 ENSMUSG00000038683 ENSMUST00000046951 1 1 1 80 13 41106586 41106604 CATCACGTTCTTGTCACAG 58 41106645 41107717 AGATGGAGGAACTTTCTTATCC 59 NA Mus musculus 50 Akap2 ENSMUSG00000038729 ENSMUST00000098066,ENSMUST00000030049,ENSMUST00000095073,ENSMUST00000043456 1 4 14 87 4 57896061 57899168 TGGATGATAGTAGTTACACCTC 58 57905757 57905775 CTCTTCCTCCGATTAACCC 59 NA Mus musculus 50 Sdk1 ENSMUSG00000039683 ENSMUST00000085774,ENSMUST00000110794,ENSMUST00000074546 1 3 3 80 5 142413663 142424465 CTTTCCATCATAGAGCCAC 57 142424507 142424527 GATGTCCATAGTTTCTTCCAC 58 NA Mus musculus 50 Alg2 ENSMUSG00000039740 ENSMUST00000116339 2 1 2 83 4 47484439 47484457 TACCAGTATGTCACGAAGC 59 47483613 47484392 TTCTAGAAAGGGATCGCAG 58 NA InUTR Mus musculus 50 Hmx3 ENSMUSG00000040148 ENSMUST00000046093 2 1 1 88 7 138687818 138687836 ACATGAAACGCTACCTGAG 59 138687888 138687906 CTGGAACCAGATCTTGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lrrc52 ENSMUSG00000040485 ENSMUST00000036643 3 1 1 60 1 169396539 169396557 TTCATCGGGATCTTCAGAC 58 169396497 169396517 AGATGGAAGTTAGGTTGTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Begain ENSMUSG00000040867 ENSMUST00000073156 1 1 1 80 12 110277109 110277127 CTACCTGGAGATTGAGCTG 59 110275915 110277065 TAGTTGCTCTGAATCCTGC 59 NA Mus musculus 50 Pif1 ENSMUSG00000041064 ENSMUST00000047099 3 1 1 81 9 65437851 65439534 AGGTTAGGCAGATGTTCAG 58 65439578 65439597 CTACAATTCCATCTCGTCCC 59 NA Mus musculus 50 Fzd7 ENSMUSG00000041075 ENSMUST00000037105,ENSMUST00000114246 1 2 2 60 1 59540818 59540836 ATGGTGCTTTACTTCTTCG 57 59540860 59540878 AAGTGAGGGACAGAATGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Phf8 ENSMUSG00000041229 ENSMUST00000112666,ENSMUST00000112670,ENSMUST00000046950,ENSMUST00000046962,ENSMUST00000112668,ENSMUST00000112662 1 6 6 80 X 148002278 148004894 AAGAAAGAAGCTTTGCCAG 58 148004936 148004956 CCTAGCCAGATCTTTAATGAG 57 NA Mus musculus 50 Wdr79 ENSMUSG00000041346 ENSMUST00000048139 1 1 1 80 11 69391177 69391196 GTCCTTCGGATTTACAACCT 59 69377438 69391134 AAGGACAGGAACCATTTCG 59 NA Mus musculus 50 Kctd12b ENSMUSG00000041633 ENSMUST00000112572,ENSMUST00000039424 3 2 2 60 X 150124062 150124081 AGTGTAAAGAATCCTTGCTC 57 150124021 150124041 CTCGATCTATGAAGAATCTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 BC006965 ENSMUSG00000041674 ENSMUST00000028543 3 1 2 185 11 112572411 112572429 CTGGCTTCTTTGTCAAGTC 58 112539165 112552616 CAAGAGCCCTTAGTGTCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 S100a14 ENSMUSG00000042306 ENSMUST00000048075 1 1 1 80 3 90331151 90331169 AACTCACAGAAGGAAGGAC 58 90331213 90331651 TGAATTCTTGGGCATCCTC 59 NA InUTR Mus musculus 50 Cd2bp2 ENSMUSG00000042502 ENSMUST00000035771 3 1 1 94 7 134338603 134338622 CAAGCACTCTTTAGACAGTG 58 134338407 134338547 CTTCCTGACCTTCTACATCC 59 NA Mus musculus 50 4933417O08Rik ENSMUSG00000042532 ENSMUST00000087123,ENSMUST00000049129 1 2 2 80 19 42341500 42341519 CAGAATGAGAAGGTCTTTGC 58 42341562 42342853 GGAGATCTCGATAACCCTC 58 NA Mus musculus 50 Tmem108 ENSMUSG00000042757 ENSMUST00000049452 3 1 1 85 9 103402525 103512048 ACTATTAAGCTTTCTCCTGACC 59 103402461 103402479 TCTGTAGAGATTCCCTGGG 59 NA Mus musculus 50 Zc3h6 ENSMUSG00000042851 ENSMUST00000110320 3 1 2 142 2 128817007 128818912 GCATAACTCTCCATCTGGT 58 128819015 128823359 TTCCTGATATACGTCTATGCTG 59 NA Mus musculus 50 Lrit2 ENSMUSG00000043418 ENSMUST00000057176 2 1 1 84 14 37882432 37885066 GAGAATTTGATGTGTTGGCC 59 37885113 37885131 CCATCTACCAGTTGAGCTG 59 NA Mus musculus 50 Cep164 ENSMUSG00000043987 ENSMUST00000114628,ENSMUST00000084234,ENSMUST00000040263 1 3 4 80 9 45587687 45587786 GAGAACCAAATTAGAACCGAG 58 45587627 45587646 TCTTTCAGCTTTCTGGAGAG 59 NA Mus musculus 50 5430402E10Rik ENSMUSG00000044121 ENSMUST00000063127 3 1 1 219 X 75233695 75233714 TCCTGCTAATTGTGATTGCA 59 75234374 75234835 CCATTCATCTGGACATGGA 59 NA DesignRelaxed Mus musculus 50 BC054059 ENSMUSG00000044405 ENSMUST00000109484,ENSMUST00000059889 3 2 2 140 2 158328502 158331548 GAGTCAAAGGAAGATGATTCAG 58 158331649 158333700 CAGATGGTACCTGGTAGAG 58 NA Mus musculus 50 Lingo4 ENSMUSG00000044505 ENSMUST00000050975 2 1 1 60 3 94206069 94206088 GGCCTACAAAGTCTACTCAC 59 94206111 94206129 CAGGACCCACAATTCTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr923 ENSMUSG00000044798 ENSMUST00000051238 3 1 1 60 9 38636034 38636053 ACTGTCTCACTCTTCTTTGG 59 38636075 38636094 ACTCTACATCAGAAGGTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700056E22Rik ENSMUSG00000044854 ENSMUST00000050306 2 1 1 64 1 185857174 185857192 GAACTTTGTCCATCAGAGG 57 185857128 185857146 CTTCCCACTTCTCTTCACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700001K23Rik ENSMUSG00000044962 ENSMUST00000056757 3 1 1 95 19 53323435 53323886 TGTTCTTTCAGAAGGACAGG 59 53323359 53323377 TCAGCTCTTGGATCTTCAC 58 NA Mus musculus 50 E130308A19Rik ENSMUSG00000045071 ENSMUST00000070150 1 1 2 131 4 59704088 59704106 TCTCATCATGTGAGGTAGC 58 59704200 59750442 TAGAATAAGCTGGAATGCAC 57 NA Mus musculus 50 Zfp688 ENSMUSG00000045251 ENSMUST00000106300,ENSMUST00000051352 3 2 2 94 7 134563139 134564921 GAGGAGACATTCCAAATGAG 57 134563064 134563082 AACCACCTCTTTAGGTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 6430704M03Rik ENSMUSG00000045589 ENSMUST00000053681,ENSMUST00000050001 3 2 2 62 4 56980950 56980968 GTACTACCTGTTTGCTTGG 58 56976005 56976023 GAGTCTATGTCGTGACGAG 59 NA DesignNoJunction Mus musculus 50 Eif4g1 ENSMUSG00000045983 ENSMUST00000115463,ENSMUST00000044783,ENSMUST00000073840,ENSMUST00000115457,ENSMUST00000115461,ENSMUST00000115460 2 6 6 80 16 20689114 20689274 CTGCAATTATCTTTGAGACTCC 59 20689315 20689333 ACAGGTATTTCTGCAGCAG 59 NA Mus musculus 50 ENSMUSG00000046262 ENSMUSG00000046262 ENSMUST00000105754,ENSMUST00000105756,ENSMUST00000105757,ENSMUST00000105753 3 4 5 112 4 143798727 143799258 AAGGTTCAAACCAGTAGGT 58 143798633 143798651 TTCTCTGTCGTGAACTCTG 58 NA Mus musculus 50 Bdh1 ENSMUSG00000046598 ENSMUST00000089759,ENSMUST00000115227,ENSMUST00000115226 3 3 3 86 16 31450040 31455120 ATCCTGAGAAGGGAATGTG 58 31455169 31455188 TATATGTCTCCATGCTGGTG 58 NA Mus musculus 50 Zfp474 ENSMUSG00000046886 ENSMUST00000072666 2 1 1 89 18 52784495 52797736 ATGAGCAGATCTTGGAGAC 58 52797789 52797807 GATCAATGACTCAGAGCGT 59 NA InUTR Mus musculus 50 Zfp654 ENSMUSG00000047141 ENSMUST00000052588 2 1 1 60 16 64785238 64785259 GCTATCCAAATGTGTACTTCTG 59 64785199 64785218 AATGGCAGCTTAAATGACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Trpt1 ENSMUSG00000047656 ENSMUST00000088223 2 1 1 149 19 7072776 7072794 TACTAAAGGGCTTGTCACG 59 7073049 7073159 AAGGGATTCCATCTGTGAG 58 NA Mus musculus 50 Klhl11 ENSMUSG00000048732 ENSMUST00000056665 3 1 1 82 11 100333550 100333569 TATCGAGTACATGTACACCG 58 100325752 100333505 ATAAGAATCTGTCGGCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Scn3b ENSMUSG00000049281 ENSMUST00000114956,ENSMUST00000049941 2 2 2 86 9 40077622 40084660 CATCTACTGGGTCAGAGTC 58 40084710 40084728 CTCAGCTTCATGGAATTGC 59 NA Mus musculus 50 Syt12 ENSMUSG00000049303 ENSMUST00000059295 1 1 1 96 19 4460801 4467915 ATCTGAGCGTCATCAAGAG 59 4460723 4460741 TTCCATAGACTCACAGCAG 58 NA Mus musculus 50 Olfr1404 ENSMUSG00000049456 ENSMUST00000056592 3 1 1 60 1 175146269 175146287 ATCAGTATTTAGCTTGCCC 57 175146311 175146329 CACATCACAGAAGAAGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr250 ENSMUSG00000049864 ENSMUST00000052085 2 1 1 60 9 38175406 38175424 CTGATGGGATTTGTCTCAG 57 38175448 38175466 ATAGCTGAGTCATGCATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Muc15 ENSMUSG00000050808 ENSMUST00000111016 2 1 3 96 2 110574030 110574050 CCTTGTTGGCTACTTATTGTG 59 110574108 110577572 CTGGGTTGTAGTAACTGGT 58 NA Mus musculus 50 Siglech ENSMUSG00000051504 ENSMUST00000094360,ENSMUST00000060416 3 2 2 91 7 63026991 63027009 CAGATGTGGTACAGGTAGC 59 63027064 63027887 CGTATGGGATCTCTTGCTG 59 NA Mus musculus 50 Rap2a ENSMUSG00000051615 ENSMUST00000062117 2 1 1 126 14 120878153 120878171 GACCTGTACATCAAGAACG 57 120878261 120902839 CTGGAACCTTCTCATACCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cdc42se2 ENSMUSG00000052298 ENSMUST00000064104 2 1 1 95 11 54537138 54537156 CGAAGTATGATCGGAGAGC 59 54533845 54537079 CTGAATGGAGCTGACTGAG 59 NA Mus musculus 50 Pmp2 ENSMUSG00000052468 ENSMUST00000029034 2 1 1 147 3 10182400 10182418 GTTTGATGAAACCACAGCT 58 10180792 10182133 TATACACTCCACTACCATTCTC 58 NA Mus musculus 50 Dand5 ENSMUSG00000053226 ENSMUST00000098570,ENSMUST00000065539 2 2 2 84 8 87340385 87340403 CCGGGTCCTTAATCATCTC 59 87340319 87340337 GTTGCAGAAGACTACAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 3110082I17Rik ENSMUSG00000053553 ENSMUST00000066052 3 1 1 228 5 139840045 139840063 AAACTGAAGAAGGAACGGA 58 139836675 139837269 CATCAGGAACCTTGTCCTC 59 NA DesignRelaxed Mus musculus 50 ENSMUSG00000053568 ENSMUSG00000053568 ENSMUST00000066077 3 1 1 72 11 105805129 105805147 AATGCAGATTGGTCCACTC 59 105805182 105805201 GACTTGAATTCAAGTCCAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1500015L24Rik ENSMUSG00000053614 ENSMUST00000066183 3 1 1 79 19 20495736 20496749 ATGAAGGAAATGGACTGGT 58 20496792 20496810 GTCTGTAACCCATAGTCCT 57 NA DesignNoJunction Mus musculus 50 ENSMUSG00000053615 ENSMUSG00000053615 ENSMUST00000066157 3 1 1 65 2 125331116 125331135 TCTTAAAGTCCCAAGAAGGG 58 125331163 125331181 GAAAGGGTAAGGGAAGCTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 H2-T24 ENSMUSG00000053835 ENSMUST00000116595,ENSMUST00000066488,ENSMUST00000113760 3 3 3 60 17 36151784 36151803 GAGATACACATGTCATGTGC 58 36151640 36151761 CTCCCATTTCAGAACAAGG 58 NA DesignNoJunction Mus musculus 50 Mat2a ENSMUSG00000053907 ENSMUST00000059472,ENSMUST00000066627 3 2 2 115 6 72386516 72386999 CTCTTCCAAAGGGTTTGAC 58 72386419 72386437 CTGCACCAATATCTTCCTC 57 NA Mus musculus 50 6230419C23Rik ENSMUSG00000054204 ENSMUST00000067087 3 1 1 130 12 31571950 31572048 TGAAACATCTCACAGGTCC 59 31574914 31574932 CAGCCGAGTAAGTAACCTG 59 NA Mus musculus 50 Ceacam2 ENSMUSG00000054385 ENSMUST00000044547,ENSMUST00000066503,ENSMUST00000064862 3 3 3 171 7 26305891 26305910 AATCATAACTGGAGCTGTGG 59 26303196 26304188 GTCATCCACCTTGTTAGGAG 59 NA Mus musculus 50 Akr1c20 ENSMUSG00000054757 ENSMUST00000080361,ENSMUST00000078239 2 2 2 83 13 4513562 4513581 GAGGTAGGATTAGCCATCAG 59 4511940 4513516 TTGCCAAACCTTTGATGTG 59 NA Mus musculus 50 4933400A11Rik ENSMUSG00000055357 ENSMUST00000068894,ENSMUST00000068874,ENSMUST00000112102 1 3 3 60 X 166215093 166215113 GCTCAGTATAACATGCATCAG 58 166215053 166215071 ACACATGATCGTCATACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 B4galnt4 ENSMUSG00000055629 ENSMUST00000048002 2 1 1 80 7 148253323 148253425 AGGACTACAGTTTGTGTACC 58 148253468 148253486 CACTTGTTGTCTGTCTCCA 59 NA Mus musculus 50 Klhl26 ENSMUSG00000055707 ENSMUST00000066597 2 1 1 170 8 72979507 72979526 ACTTAAGTGCACCTTCTCTG 59 72976910 72979375 AACATGGCCCTAAAGTAGTC 59 NA Mus musculus 50 Cfl1 ENSMUSG00000056201 ENSMUST00000116560,ENSMUST00000070195 1 2 2 107 19 5492786 5492804 ACCTGGTGTTCATCTTCTG 59 5493225 5493392 CATGCTTGATTCCTGTCAG 58 NA Nonspecific Mus musculus 50 Kcnq3 ENSMUSG00000056258 ENSMUST00000070256 1 1 1 80 15 65860237 65860256 CATGCTTCGAATGGATAGGA 59 65856821 65860195 GTGATGAGTTCTTTGCTGTG 59 NA Mus musculus 50 OTTMUSG00000005065 ENSMUSG00000056288 ENSMUST00000070315 3 1 1 90 11 4526482 4526500 AACTCCTCTTCCCTTTCAG 58 4520983 4526428 TCTTGATAAGACCTGCTCC 58 NA InUTR Mus musculus 50 Zfp456 ENSMUSG00000056552 ENSMUST00000081582 1 1 1 101 13 67448846 67448864 AGAAGAGTGGGAATACCTG 57 67446366 67448782 GTAGAGGAAACAAGATCCAG 57 NA Mus musculus 50 EG433384 ENSMUSG00000056699 ENSMUST00000070987 1 1 1 60 1 183782195 183782217 GAGGATAGTGACCTATCTATGGA 59 183782157 183782179 GTAGGTCATAGAAGTTGTACCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000072737 ENSMUSG00000056940 ENSMUST00000090650,ENSMUST00000096169 1 2 2 114 14 7423073 7423091 AAGAGAATGGCGATGAAGG 59 7422245 7422997 GTATTTCTAGGAGACCTGTGC 59 NA Mus musculus 50 V1rc9 ENSMUSG00000057144 ENSMUST00000078890 2 1 1 60 6 58385055 58385073 TGTATGACCCAGTCATCCT 59 58383426 58384569 AATACAGAGACCCACAGTG 58 NA DesignNoJunction Mus musculus 50 Atp5sl ENSMUSG00000057229 ENSMUST00000077338,ENSMUST00000085953 3 2 2 80 7 26406097 26407366 CAACAGGGAGAATCGATCC 59 26407410 26407428 TGCTTCAGGATGAAGACAG 59 NA Mus musculus 50 Olfr328 ENSMUSG00000057654 ENSMUST00000108824 3 1 2 116 11 58366943 58366961 GAGATGAACTTCGAGAGGC 59 58365683 58365701 TTGACTGAAGAATCCCACC 59 NA DesignNoJunction, InUTR Mus musculus 50 Olfr695 ENSMUSG00000057832 ENSMUST00000080925 3 1 1 60 7 113858173 113858191 GGAAGTCTTCAACTCCACC 59 113858131 113858152 ACTGTCATTCAGAATTCCTACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Eml1 ENSMUSG00000058070 ENSMUST00000054955,ENSMUST00000109862,ENSMUST00000109860 2 3 3 60 12 109748444 109750036 TAAGGATGGAAAGCAACTG 57 109750060 109750078 AGTGTTCAGTGTCACAGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Defb50 ENSMUSG00000058568 ENSMUST00000078879 1 1 1 60 8 22934125 22941528 TACCTGATGGTCAAAGGTG 58 22941552 22941570 TACACTTGATCCTGACGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr224 ENSMUSG00000059279 ENSMUST00000108822,ENSMUST00000108823 3 2 2 87 11 58381561 58381580 GTGAAGAGATGAACTTGGAG 57 58380824 58380843 ACTGTCCAGTATAGTTGCTC 58 NA DesignNoJunction, InUTR Mus musculus 50 Olfr700 ENSMUSG00000059522 ENSMUST00000079936 3 1 1 60 7 113949347 113949367 GTGTGATCTTCTTACTTCTCC 57 113949307 113949328 AGCAGGATTAGTGTATAAGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnh7 ENSMUSG00000059742 ENSMUST00000075052,ENSMUST00000112454,ENSMUST00000112452 2 3 3 82 2 62715408 63020125 TATCACAAGAATGGTTCCAC 57 62715345 62715363 ATGAACATCATAGCCACAC 57 NA Mus musculus 50 Fcrl1 ENSMUSG00000059994 ENSMUST00000072480 3 1 1 82 3 87188721 87188739 TCAATATTACTGTGCGGCT 59 87188785 87188970 GAGACACTGGAACTCTGAC 59 NA Mus musculus 50 Pcnxl2 ENSMUSG00000060212 ENSMUST00000047239 2 1 1 86 8 128312442 128325368 AGCTATAATACAAGGCGCA 58 128309368 128309386 GAGGTTGTTGTCATCACTC 58 NA Mus musculus 50 Nlrp9b ENSMUSG00000060508 ENSMUST00000094751,ENSMUST00000073151 1 2 2 82 7 20613900 20613918 CTCCATGGATGTGACTGAG 59 20613964 20627713 CACATTTACCCAACAGCAG 59 NA Mus musculus 50 1700012C15Rik ENSMUSG00000060630 ENSMUST00000080407 3 1 1 106 11 73503866 73523978 GTAAGAGAACCAGCATTGGA 59 73524044 73524065 CCATTAAGTCCAAATCTTGGTG 59 NA Nonspecific Mus musculus 50 Copz1 ENSMUSG00000060992 ENSMUST00000100162 3 1 1 95 15 103121106 103121124 TACTATGACGACACCTACC 57 103121183 103121773 CAGAGCGATTTCACTATCC 57 NA Nonspecific Mus musculus 50 Rrp1 ENSMUSG00000061032 ENSMUST00000062678,ENSMUST00000092345,ENSMUST00000105386 3 3 3 83 10 77865443 77866258 GTCCTCCAGTTTGACTACG 59 77865378 77865396 CTTCCTGTTCTGAGAAGGG 59 NA Mus musculus 50 Olfr936 ENSMUSG00000061404 ENSMUST00000082311 1 1 1 60 9 38854287 38854305 TCTACACCATCTTTGTGCC 59 38854245 38854263 ACATCCTTGTTCCTCAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ttr ENSMUSG00000061808 ENSMUST00000075312 3 1 1 157 18 20824981 20824999 CTGATGGTCAAAGTCCTGG 59 20828511 20828530 AACTTCTCATCTGTGGTGAG 59 NA DesignNoJunction Mus musculus 50 Es22 ENSMUSG00000061959 ENSMUST00000034173 1 1 1 80 8 95734311 95734329 AAGAACTTCAACACAGTGC 58 95732870 95734269 GTAGTTCATCATAGTTGGCAG 58 NA Mus musculus 50 Nrg1 ENSMUSG00000062991 ENSMUST00000080782,ENSMUST00000073884 3 2 2 81 8 32941690 32948149 CTTCTACAAGCATCTTGGG 57 32936778 32936796 ACAGATGCCAGTAATTGTC 57 NA Mus musculus 50 Brwd3 ENSMUSG00000063663 ENSMUST00000041866,ENSMUST00000101283 3 2 2 85 X 106020740 106020758 AAATCCCTCAGAGTGTTCC 58 106020233 106020691 ACTCTTACAGTCTTTGGCA 58 NA Mus musculus 50 OTTMUSG00000010009 ENSMUSG00000066031 ENSMUST00000085144,ENSMUST00000084194,ENSMUST00000105770 1 3 3 83 4 143382847 143382865 AACCTGGAGACTTTGAAGG 59 143382912 143383447 TCTGAGTTTGCACCTACTG 59 NA Nonspecific Mus musculus 50 Ccl27 ENSMUSG00000066202 ENSMUST00000107987 1 1 3 61 4 42667817 42669031 CTAAGCAGAAGCAAGAAGC 58 42669056 42669074 ATAGAGCTGAGTACAGCAG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 MGI:3648886 ENSMUSG00000066244 ENSMUST00000084758 2 1 1 60 7 115004719 115004738 ATGTCATACCAAAGTCAAGC 58 115004678 115004696 GTGTAGAACACAGACACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trim12 ENSMUSG00000066258 ENSMUST00000033213,ENSMUST00000106839 2 2 3 67 7 111450772 111452682 AGAAATACTGCAGGGTGTG 59 111449674 111449692 CTTTGGGCTTCTTCATCGA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Eif1ay ENSMUSG00000067194 ENSMUST00000087143 1 1 1 86 X 155815468 155815487 CACATCAGAGGGAAATTGAG 58 155816511 155817670 TTTGTTGTCCTGGTAATCTC 57 NA Mus musculus 50 ENSMUSG00000067371 ENSMUSG00000067371 ENSMUST00000087544 1 1 1 60 6 56747907 56747925 CCCAAAGTTCTATTCAGCG 58 56747949 56747967 CCTCAAACACGAACAACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Krt81 ENSMUSG00000067615 ENSMUST00000061185 1 1 1 174 15 101289992 101290307 TGAATGTCTGTGTCAGCAG 59 101289836 101289854 TAACATTTACGGCCACAGG 59 NA Mus musculus 50 Ckt2 ENSMUSG00000068167 ENSMUST00000089279 1 1 1 60 16 64477778 64477798 CAAACTAAGACAATCACCACC 59 64477738 64477756 GCATTTCGAGTTGTGAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ndufa12l ENSMUSG00000068184 ENSMUST00000022206 2 1 1 83 13 108881743 108881761 TATGAAGCAGGAGACATCC 58 108843140 108871558 TAGTATTTCCTCCATAGTGGG 58 NA Mus musculus 50 Clec16a ENSMUSG00000068663 ENSMUST00000066345,ENSMUST00000115827,ENSMUST00000115828,ENSMUST00000115824,ENSMUST00000038145,ENSMUST00000115823 1 6 6 86 16 10688647 10688665 ATTTACCAGATGAGCCTGG 59 10688715 10691487 CTGCATGTCCTGTAGAAGG 59 NA Nonspecific Mus musculus 50 Zfp748 ENSMUSG00000069204 ENSMUST00000091522 3 1 2 154 13 67646338 67647561 GGTCTTGCTTTCTCTAAGC 58 67643789 67643807 AGGAGTGAGTTCCAATCAC 58 NA DesignNoJunction Mus musculus 50 mmu-mir-489 ENSMUSG00000070107 ENSMUST00000093599 3 1 1 62 6 3671945 3671966 GACACTTTCTAAAGTCTTCCAG 58 3671904 3671925 GTTCCATGTAACAGTTTAGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 LOC100042790 ENSMUSG00000070841 ENSMUST00000076515 3 1 1 80 7 7636159 7636177 GAGATGAATCTGCAACAGG 58 7634592 7636115 GGAGTTTACCTTCAAGCAG 58 NA Nonspecific Mus musculus 50 Zfp352 ENSMUSG00000070902 ENSMUST00000107129,ENSMUST00000107130,ENSMUST00000094971 1 3 3 60 4 89891733 89891752 CTTACCACCTCAAAGAACAC 58 89891775 89891793 TCATCACACCCGTATTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rhox7 ENSMUSG00000071767 ENSMUST00000096454 1 1 1 87 X 35186262 35186280 GACTCAGTACCCAGATGTG 59 35187448 35188868 GTTGTTAAACCTTATCTGCACC 59 NA Nonspecific Mus musculus 50 EG629204 ENSMUSG00000071788 ENSMUST00000063356 2 1 1 60 X 26118305 26118638 ATTGGACCTTATGGAAGTACAG 59 26118266 26118284 TTCAGGATTTGCATTCCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 A530040E14Rik ENSMUSG00000072109 ENSMUST00000093501 1 1 1 129 1 85103256 85103769 CCTTGGAGATCAATAGAGCT 58 85103858 85108078 GGGTGAAGGTTATCTTTAACTG 58 NA InUTR Mus musculus 50 Igsf10 ENSMUSG00000072290 ENSMUST00000097075 3 1 1 80 3 59145106 59145124 CATTTCGGTACCTGACCTC 59 59143711 59145063 TAGTGAGGCTGTTATACCCT 59 NA Mus musculus 50 Klf12 ENSMUSG00000072294 ENSMUST00000097079 3 1 1 81 14 100386700 100386720 CCAAATGTGACCTTAGATAGC 58 100341305 100386659 ATGGATGTACCTCTTGTACTG 58 NA Mus musculus 50 1700049E17Rik ENSMUSG00000072613 ENSMUST00000100701 3 1 1 83 14 42388611 42389309 AGGATTCCTACAGCTTCAC 58 42389356 42389374 TCTCATTCAGCAACATCCT 58 NA Nonspecific Mus musculus 50 Gm1679 ENSMUSG00000072754 ENSMUST00000100924 1 1 1 156 5 110783615 110783633 CAGTGTATATCTTGGCGCA 59 110783861 110784881 TGTTCATTCAGACTGGCAG 59 NA InUTR Mus musculus 50 Bhlhb9 ENSMUSG00000072964 ENSMUST00000068755,ENSMUST00000113141 2 2 3 60 X 132425057 132425076 CCAATCTTGTTAGTGCTGTG 59 132425096 132425117 GAACCCTTTCTAATATGCTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 B430006D22Rik ENSMUSG00000072977 ENSMUST00000056191 2 1 1 115 6 83352710 83352728 TACTAAGAGTCTGCTGGAC 57 83348564 83348582 TCTAGTGCTCTACTGACAG 57 NA DesignNoJunction Mus musculus 50 ENSMUSG00000073487 ENSMUSG00000073487 ENSMUST00000097456 3 1 1 62 1 180117515 180117535 ATTCACCAGGATATTGTAGGC 59 180117473 180117491 CAGGACTTTCTGGGAACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073528 ENSMUSG00000073528 ENSMUST00000097514 2 1 1 60 1 161614664 161614683 AGGTTATTACCTTCTGCAGG 59 161614706 161614724 GGGAACTCTGTCTTCAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm1614 ENSMUSG00000073600 ENSMUST00000097619 2 1 1 60 18 35813785 35813804 TCATCAGGCTTACAAACAGG 59 35813744 35813763 GGTTCTATCAGGAGTCTCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Apitd1 ENSMUSG00000073705 ENSMUST00000105696 1 1 3 113 4 148506413 148506431 AAACAGGTGAACTTCAGCA 59 148501531 148505750 AGCAGTTTGCACATTTCTG 59 NA Mus musculus 50 Olfr572 ENSMUSG00000073963 ENSMUST00000098214 1 1 1 60 7 110076739 110076758 TCTATGGCCTTATAGCTGTC 58 110076780 110076799 GAGATGAGGATAGAAAGGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rhog ENSMUSG00000073982 ENSMUST00000106923,ENSMUST00000098230 1 2 2 60 7 109388677 109388695 TGCTATACAACTAACGCCT 58 109388635 109388653 CGCTGTAATTGTCAAACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 1700057G04Rik ENSMUSG00000074139 ENSMUST00000098477 2 1 1 80 9 92245923 92245943 TCATAACTCTACGAAGACCAC 58 92245982 92247391 GAGGAGCTTGTATTTCTATCTG 58 NA Mus musculus 50 0610010E21Rik ENSMUSG00000074211 ENSMUST00000098586 2 1 1 76 7 31106967 31106985 AGGAACCTTCCTCTAGGTC 59 31107022 31107043 GAATTCTTGTGAAGATACAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Spint2 ENSMUSG00000074227 ENSMUST00000098604,ENSMUST00000108236 2 2 3 93 7 30043507 30043525 TATCAGCTTCATCTACGGC 58 30043212 30043450 ATGCATCTGCTTACCAGAG 59 NA Mus musculus 50 Cib3 ENSMUSG00000074240 ENSMUST00000098630 1 1 1 80 8 74734324 74734342 CTCTTGACTACACGACCAG 59 74731164 74734280 AAGGGTTATCCTTCAGCTC 58 NA Mus musculus 50 ENSMUSG00000074512 ENSMUSG00000074512 ENSMUST00000098988 3 1 1 60 9 8555276 8555294 GAGGATAGGAGCATGTCAC 59 8555234 8555252 TACACTCCAAGTAAGGACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Defb23 ENSMUSG00000074681 ENSMUST00000099206 2 1 1 87 2 152285318 152290279 TGAAATCAGAATTTGCGACC 59 152285250 152285268 TGCATCTGGGTTTCATCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 D730002M21Rik ENSMUSG00000074769 ENSMUST00000099314 3 1 1 97 19 56113822 56113840 TTCAGGCCTATTTCCAGAG 58 56113900 56113919 CTTCAGACTTTGAGGGTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074807 ENSMUSG00000074807 ENSMUST00000099385 2 1 1 203 2 128793018 128793036 TAGCCATTGGAGGAAACTG 59 128792833 128792851 CAGGAACATCGAGAAATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr74 ENSMUSG00000075142 ENSMUST00000099840 3 1 1 60 2 87814750 87814770 CTTCTCAGATTATCCTGACCT 58 87814710 87814730 GCTGTAAATGACGAGAAACAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pde11a ENSMUSG00000075270 ENSMUST00000099992,ENSMUST00000111946 2 2 3 84 2 75869029 75869047 AGTTCTTCGAGCTTGTCAG 59 75867380 75868983 GCTGTCATTAACATTGATCGG 59 NA Mus musculus 50 Dolk ENSMUSG00000075419 ENSMUST00000100219 3 1 1 60 2 30140052 30140071 ACCTGAACTACAGTTATGCC 59 30140011 30140029 GCTTCCAGAAGGGATACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075488 ENSMUSG00000075488 ENSMUST00000100344 2 1 1 60 14 100615962 100615980 TTCAAGGCTTAGCCTAGTG 58 100615920 100615939 TGGAACCTTTAAGAAGTGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075530 ENSMUSG00000075530 ENSMUST00000100409 3 1 1 276 2 11451314 11451332 AACTTCTGCTCCTGTAAGC 59 11451690 11451708 GGAGTAGAAGCAGTTCTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Gpx4 ENSMUSG00000075706 ENSMUST00000105372,ENSMUST00000097227 3 2 2 95 10 79517780 79517799 GCAAGATCTGTGTAAATGGG 58 79517857 79518678 ATTTGATGGCATTTCCCAG 58 NA Nonspecific Mus musculus 50 IGKV4-80 ENSMUSG00000076540 ENSMUST00000103341 1 1 1 281 6 68966833 68967027 AGTCATAATGTCCAGAGGAC 58 68966571 68966589 TGGCAGTAATAATCGGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV6-17 ENSMUSG00000076590 ENSMUST00000103391 3 1 1 245 6 70321495 70321691 GTTTCTCTGGTTGTCTGGT 59 70321900 70321918 AAAGTGAAATCCGTCCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pou3f1 ENSMUSG00000078236 ENSMUST00000105033 2 1 1 60 4 124336958 124336977 TGTATGCTGTATTTATCGGG 57 124337000 124337018 TTTATACACAGATGCGGCT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 C030017K20Rik ENSMUSG00000078490 ENSMUST00000105619 1 1 1 96 4 154838808 154839024 GCAGAAATAGTTGGCACAC 59 154839084 154839102 TAAACTCTTGAGCCTTCCC 58 NA Nonspecific Mus musculus 50 NP_001078981.1 ENSMUSG00000078605 ENSMUST00000106710 2 1 1 150 11 109001372 109001390 CCACAGTCACAGAAGAAGG 59 109000882 109000901 AAGAAAGGGTACTTCCATGG 59 NA DesignNoJunction Mus musculus 50 MGI:1922798 ENSMUSG00000078782 ENSMUST00000053562 1 1 1 60 7 28231016 28231034 GGAAAGGAAATCAAAGCAC 57 28230974 28230993 GGTTCAATGCTTTATTCTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Serpina3m ENSMUSG00000079012 ENSMUST00000055089 2 1 1 266 12 105627920 105629682 AAGGCAAATGGAAGATATCC 57 105629910 105629929 AAGATTTCCACCATTTCCTC 57 NA DesignNoJunction Mus musculus 50 Pms2 ENSMUSG00000079109 ENSMUST00000110709 1 1 3 66 5 144680443 144680461 TCTTCATCAATCAGAGGCC 59 144682897 144682918 ACATGTGATACCTCATTGAC 57 NA DesignRelaxed Mus musculus 50 Hoxd3 ENSMUSG00000079277 ENSMUST00000111983,ENSMUST00000053932,ENSMUST00000111982,ENSMUST00000047830 1 4 4 68 2 74582565 74582583 AAGAATCCCGACAGAACTC 58 74584381 74584399 TCTTGTCCTCACAGTTCTC 58 NA DesignNoJunction Mus musculus 50 ENSMUSG00000048936 ENSMUSG00000079351 ENSMUST00000112564 2 1 1 65 19 29860929 29861494 GATAACAAGGCACTTGAGAG 58 29860883 29860901 TCCAATCCATAGTAGCCTC 57 NA DesignNoJunction Mus musculus 50 ENSMUSG00000072740 ENSMUSG00000079405 ENSMUST00000112809 1 1 1 87 14 3535031 3535725 TCCTACAGCATTAAGGAGG 58 3535776 3535794 GCCTTCTGTTCTCATTCAG 58 NA Nonspecific Mus musculus 50 Ick ENSMUSG00000079454 ENSMUST00000009972 2 1 1 70 9 77972811 77972829 CCTAATCTCAGGAGCTGTC 58 77972863 77972881 TTTCCAAGTCTGCAAAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ankrd39 ENSMUSG00000079610 ENSMUST00000001172 2 1 1 67 1 36596379 36598721 ATGACCAGTCTGCATAAGG 59 36596330 36596348 CTGTGTTGTAACAGGAGGG 59 NA DesignNoJunction Mus musculus 50 NP_001094956.1 ENSMUSG00000079652 ENSMUST00000115286 1 1 1 95 6 29236121 29237672 AAACAGCAACTGAAAGCAG 59 29237731 29237749 GTTCTAAGAGACTGCTGCT 58 NA Mus musculus 50 NP_001098097.1 ENSMUSG00000080250 ENSMUST00000116523 2 1 1 81 5 109791344 109791362 CATCAGAAACATACAGCCG 58 109791405 109792604 GCTCCATATCTGTTTCATTGG 59 NA Mus musculus 50 Brms1 ENSMUSG00000080268 ENSMUST00000116567 2 1 1 83 19 5047410 5047428 TACATAGCAGAAGCAGCTC 59 5047475 5048517 TGTATGGACCAGAAACGAG 58 NA Mus musculus 50 Fmr1 ENSMUSG00000000838 ENSMUST00000114654,ENSMUST00000114653 3 2 8 142 X 65963947 65965491 TACTTCAGCTCCAACAGAG 58 65966423 65966442 TATCTGTTCGGGAATGATCG 59 NA Mus musculus 50 Gnb1l ENSMUSG00000000884 ENSMUST00000000904,ENSMUST00000100091,ENSMUST00000090086 2 3 5 112 16 18548187 18548205 TTCAGATTCTGGAGATGCC 59 18548281 18552474 GAGACTGGAGTTAGTCTGC 59 NA Mus musculus 50 Col18a1 ENSMUSG00000001435 ENSMUST00000081654,ENSMUST00000072755,ENSMUST00000105409 1 3 3 95 10 76548132 76550130 ACACAAGGAGGATACATCTC 58 76548056 76548074 CTAGGATCTTCTGTGGTGC 59 NA Mus musculus 50 Trmt1 ENSMUSG00000001909 ENSMUST00000001974,ENSMUST00000109766,ENSMUST00000109767,ENSMUST00000109768 2 4 4 81 8 87219228 87219336 GTGATGGAGGACTTCTGTG 59 87219380 87219399 TACTTGCTGTAGCATGTCTC 59 NA Mus musculus 50 Trmt1 ENSMUSG00000001909 ENSMUST00000001974,ENSMUST00000109766,ENSMUST00000109767,ENSMUST00000109768 3 4 4 82 8 87219228 87219336 GTGATGGAGGACTTCTGTG 59 87219380 87219400 ATACTTGCTGTAGCATGTCTC 59 NA Mus musculus 50 Nfix ENSMUSG00000001911 ENSMUST00000109764,ENSMUST00000098572,ENSMUST00000063596 3 3 6 83 8 87240091 87240109 CTTCCTATGCCTGATTCCA 58 87237743 87240044 TGTCGTTGTGAATGAAGGT 59 NA Mus musculus 50 Pdzd4 ENSMUSG00000002006 ENSMUST00000114438 1 1 2 122 X 71043628 71069635 AAAGTGATGCTTCAGGAGG 59 71042223 71043542 GGGATTTACCTCTCCAACG 59 NA Mus musculus 50 Slc9a3r2 ENSMUSG00000002504 ENSMUST00000002572,ENSMUST00000019684 3 2 3 172 17 24778800 24778819 GACTGATGAACACTTCAAGC 59 24777325 24777548 TACTGCCATCCTCATTGTC 59 NA Mus musculus 50 Cd97 ENSMUSG00000002885 ENSMUST00000109802 1 1 3 80 8 86257360 86257379 AACCTGGGATATAAGCTCCT 59 86254143 86257318 GCACTCATTCACATCTTGAC 59 NA Mus musculus 50 Hlf ENSMUSG00000003949 ENSMUST00000004051,ENSMUST00000107883,ENSMUST00000043658,ENSMUST00000107881,ENSMUST00000107879 3 5 5 130 11 90202283 90207085 CCGATGATTTGAAGGATGAC 58 90202172 90202190 CTCCTTCTCCAGGAATGAG 58 NA Mus musculus 50 Cacna1b ENSMUSG00000004113 ENSMUST00000102939,ENSMUST00000070864 1 2 7 80 2 24504042 24504060 ACGTCTTTGACTTTGTCAC 58 24494718 24503999 TGATGAAGTTGTTCGTTTCC 58 NA Mus musculus 50 E130112L23Rik ENSMUSG00000004562 ENSMUST00000089769 1 1 2 80 14 52623363 52623382 TGGGAATAAACCTTTCCTGG 59 52623425 52624296 GTTTCTGAGGCTCTTCCAG 59 NA Nonspecific Mus musculus 50 Prlr ENSMUSG00000005268 ENSMUST00000110548,ENSMUST00000110545,ENSMUST00000005400,ENSMUST00000110550,ENSMUST00000110546,ENSMUST00000110544 1 6 6 81 15 10249027 10249045 ATCACAGTAAATGCCACGA 59 10249087 10252149 CTGGTTCAACAATGTAAGTCAC 59 NA Mus musculus 50 Mef2c ENSMUSG00000005583 ENSMUST00000005722 2 1 3 81 13 83732175 83732193 AGGTGTTGCTCAAGTACAC 59 83732238 83764978 TTCTTGTTCAATGCCTCCA 59 NA Mus musculus 50 Itgae ENSMUSG00000005947 ENSMUST00000006101,ENSMUST00000102537 3 2 2 83 11 72945195 72945213 TGTCTCAGTAACTTGGCAG 59 72945259 72946204 TCATTGGAATTGGAGATGGT 59 NA Mus musculus 50 Phyhd1 ENSMUSG00000007476 ENSMUST00000095078,ENSMUST00000113654 3 2 3 226 2 30112842 30117375 CAGCCAATAGGATTGAAGC 58 30117565 30117583 GAACAAGTCCTCTTCCACC 59 NA DesignRelaxed Mus musculus 50 1700019E19Rik ENSMUSG00000007867 ENSMUST00000110215,ENSMUST00000077560 3 2 3 111 12 87479763 87481007 AAGAGATGGAAGATCACCG 58 87502134 87502153 TGTAGCACAAAGTCTTCCTC 59 NA Mus musculus 50 Pou2f2 ENSMUSG00000008496 ENSMUST00000108416 1 1 8 87 7 25906043 25906061 ACCCGACATTAACCATCAG 59 25885251 25905866 TTGCTGTATGTCCTTGGTG 59 NA Mus musculus 50 Ccl8 ENSMUSG00000009185 ENSMUST00000009329 2 1 1 118 11 81929619 81929637 TCAACAATATCCAGTGCCC 59 81930097 81930115 CTTCTGGTCAAGGATCTCC 59 NA DesignNoJunction Mus musculus 50 Spnb4 ENSMUSG00000011751 ENSMUST00000011895,ENSMUST00000108363,ENSMUST00000108364,ENSMUST00000108362 3 4 4 102 7 28142465 28144775 AGGCTAAAGATGAGGAGGA 59 28142381 28142399 GTGGTAGGTAGTGTCTGAC 58 NA Mus musculus 50 Bnip2 ENSMUSG00000011958 ENSMUST00000034754,ENSMUST00000085393 2 2 2 80 9 69843928 69843947 TTTACCAGAAGATGACAGCA 58 69843989 69844903 TTAACTTCTAAGGAGCCAGG 58 NA Mus musculus 50 Camta1 ENSMUSG00000014592 ENSMUST00000058864,ENSMUST00000105669,ENSMUST00000105670 3 3 6 156 4 150449252 150449270 GGAGTTACAAGAAGTGTGG 57 150436953 150448103 AATTCTTTCACTCTGTGGC 57 NA Mus musculus 50 Bola1 ENSMUSG00000015943 ENSMUST00000107099 2 1 2 256 3 96002132 96002360 GGAACAAAGGAATCTCCGA 59 96001197 96001485 CATTCGCTTTGTACTTGCT 58 NA DesignNoJunction, InUTR Mus musculus 50 Scube1 ENSMUSG00000016763 ENSMUST00000043634 1 1 3 118 15 83469240 83507343 CTCCAATGAGACATGTGCA 59 83469140 83469158 ATGTCTTTCCATCTGGCTG 59 NA Mus musculus 50 Nbr1 ENSMUSG00000017119 ENSMUST00000107213,ENSMUST00000107218,ENSMUST00000039852 3 3 11 120 11 101432717 101432735 CATTCCATCTGTGGACCTC 59 101433286 101434135 TGATACAGTGGAATCCACAG 59 NA Mus musculus 50 Rarb ENSMUSG00000017491 ENSMUST00000037779,ENSMUST00000063750,ENSMUST00000112609 1 3 3 81 14 17341502 17341520 AACAAGGTCACTAGGAACC 58 17276344 17341458 TCCTAACAGACTCTTTGGAC 58 NA Mus musculus 50 Med1 ENSMUSG00000018160 ENSMUST00000092735,ENSMUST00000107545,ENSMUST00000018304,ENSMUST00000107541 2 4 4 82 11 98040448 98041342 GAGAATCCTGTGAGCTGTC 59 98034565 98034583 AGACCCTTAAGATGCTTGG 58 NA Mus musculus 50 Dhx40 ENSMUSG00000018425 ENSMUST00000081401 2 1 2 80 11 86613120 86613139 TTGGTTTACTGAAGAAGCTG 58 86612475 86613078 TGGTCACTTTCACAATTACC 58 NA Mus musculus 50 Krt10 ENSMUSG00000019761 ENSMUST00000103131,ENSMUST00000006961 3 2 2 80 11 99248430 99248554 TCAATCAGAAGAGCAAGGA 58 99248368 99248388 CAGTGATTTCAGACTTATGGC 59 NA Mus musculus 50 Gtf3c6 ENSMUSG00000019837 ENSMUST00000116248 3 1 2 158 10 39977083 39977383 TTGAGCAGTTTGTTCTGGT 59 39974103 39974216 TACCAAGCGTATCTTCATACTC 59 NA Mus musculus 50 Epb4.1l2 ENSMUSG00000019978 ENSMUST00000068469,ENSMUST00000020151,ENSMUST00000053095 1 3 8 80 10 25221429 25221641 GCTGTTAAGAGTTCACATGAG 58 25221682 25221701 GATTACGCTTTCGTCTTTCC 59 NA Mus musculus 50 Mdm2 ENSMUSG00000020184 ENSMUST00000105263,ENSMUST00000020408 1 2 2 80 10 117128249 117128268 TCACAGTCTATCAGACAGGA 59 117127829 117128208 ACTTCCAATAGTCAGCTAAGG 59 NA Mus musculus 50 Nfyb ENSMUSG00000020248 ENSMUST00000105309 3 1 2 89 10 82213556 82214140 AAGAGGCATTCACTAACCA 58 82213483 82213501 CTGTTGGTAAGACGTTGTG 58 NA Mus musculus 50 Ccdc139 ENSMUSG00000020280 ENSMUST00000020520,ENSMUST00000109525,ENSMUST00000058163 3 3 4 80 11 23617605 23618581 AACATTAGGAAATGGAAGGC 58 23618623 23618642 TCCTTCATTTCTTGTGAGGT 58 NA Mus musculus 50 Rasgef1c ENSMUSG00000020374 ENSMUST00000093142,ENSMUST00000109172,ENSMUST00000063444 1 3 4 127 11 49770605 49770623 GAATCCACAGAAGGAGAGC 59 49770714 49770878 AAGATGTAGGCTTTCTCGG 59 NA Mus musculus 50 Phf15 ENSMUSG00000020387 ENSMUST00000074967 3 1 4 120 11 51631194 51634590 CTTTGCAGAGGTCTATCCA 58 51631092 51631110 CACTGTTCAAAGACCACTC 58 NA Mus musculus 50 2810021J22Rik ENSMUSG00000020491 ENSMUST00000093064 2 1 4 108 11 58694146 58694226 CTTCTCCAACTCAACTTTGAG 58 58694295 58694314 TTTACACTGATAGGTCCTCC 58 NA Mus musculus 50 Tom1l1 ENSMUSG00000020541 ENSMUST00000020849,ENSMUST00000107868 3 2 4 84 11 90532511 90534162 CTTAGTCCCAGAACAGATCG 59 90532446 90532466 CATCAATATGGCTGTCATCAC 59 NA Mus musculus 50 Mboat2 ENSMUSG00000020646 ENSMUST00000110942,ENSMUST00000116439 2 2 4 93 12 25609082 25609100 TTTGGGATACCTCTCAGTG 58 25609157 25619447 AATGATCATCATTGGGCCT 59 NA Mus musculus 50 Rffl ENSMUSG00000020696 ENSMUST00000074515,ENSMUST00000071152,ENSMUST00000108173,ENSMUST00000108172,ENSMUST00000108171,ENSMUST00000093975,ENSMUST00000021036,ENSMUST00000103218,ENSMUST00000108169 3 9 9 100 11 82623578 82623596 TCAACTATAAGGGCTGCTG 59 82622025 82623514 TTCATTACCAGACACCAGG 58 NA Mus musculus 50 Atp2a3 ENSMUSG00000020788 ENSMUST00000021142,ENSMUST00000108485 1 2 4 123 11 72793837 72793948 TACAGTACGAGACAGACCT 58 72794035 72794053 CCTGTGATCATGACCACTC 59 NA Mus musculus 50 Dvl2 ENSMUSG00000020888 ENSMUST00000102575,ENSMUST00000019362 1 2 2 80 11 69821891 69821912 CCGTCAACAAGATTACTTTCTC 59 69821951 69822287 TAACTAGGTAACTCTCACAGC 58 NA Mus musculus 50 Pacs2 ENSMUSG00000021143 ENSMUST00000084891,ENSMUST00000019147 3 2 2 80 12 114299890 114299910 CTCATCTCTGATGACCAACTC 59 114299951 114300074 GACATCTGAGAGGAACTGTC 59 NA Mus musculus 50 Zmynd11 ENSMUSG00000021156 ENSMUST00000110636,ENSMUST00000110634,ENSMUST00000021584 3 3 5 80 13 9709547 9720030 GGAGATGAGATTGACTGGG 59 9709485 9709504 ACATATCAACACCTCTCCAG 58 NA Nonspecific Mus musculus 50 Numb ENSMUSG00000021224 ENSMUST00000021647 1 1 3 109 12 85137094 85140465 GTTACAAGGGACTGAGTGG 59 85137003 85137021 ACACTTCTTCTAACCAGCG 59 NA Mus musculus 50 Slc17a1 ENSMUSG00000021335 ENSMUST00000110413,ENSMUST00000006785 1 2 2 80 13 23966624 23967366 ACAATGTAAAGAACCCTGTG 58 23967409 23967427 CGACCATACCAAAGAAGAC 57 NA Mus musculus 50 Col4a3bp ENSMUSG00000021669 ENSMUST00000077672 2 1 2 88 13 97386949 97386967 CCCTATAGTCGCTCTTCCT 59 97387019 97394660 ATTTCTTCAACCTGGGAGC 59 NA Mus musculus 50 2310016C16Rik ENSMUSG00000021760 ENSMUST00000022282 2 1 1 133 13 113835703 113835721 AACTACGGAGTCACATTCC 58 113833456 113833474 GGGTTGACCAGATACTTCC 59 NA DesignNoJunction Mus musculus 50 Brd1 ENSMUSG00000022387 ENSMUST00000109381,ENSMUST00000023022,ENSMUST00000109380 3 3 4 94 15 88521755 88522186 GACTCAAGCTTTAGCACAC 58 88521679 88521698 ATACAAGATATCAGCTCGCT 58 NA Mus musculus 50 Csnk1e ENSMUSG00000022433 ENSMUST00000079284,ENSMUST00000100450 1 2 2 144 15 79256040 79256058 TCATGTACTTCAACCTGGG 58 79255403 79255932 TATGTTGAGAACTCGGAGG 58 NA Mus musculus 50 D15Wsu75e ENSMUSG00000022472 ENSMUST00000023110,ENSMUST00000100399 3 2 3 113 15 81846364 81846382 ATCTCTATCCGGTGAAGCT 59 81833024 81834190 CAACTATAGAGGTGTGCCAG 59 NA Mus musculus 50 Crebbp ENSMUSG00000022521 ENSMUST00000080297 2 1 2 128 16 4094266 4094285 CATATCGTACCAAAGCACTC 58 4093569 4094175 AAGATATGTATACACGCCCT 57 NA Mus musculus 50 Gbe1 ENSMUSG00000022707 ENSMUST00000023393 2 1 2 82 16 70437255 70441364 AGCTTCAAGTCGTTATGGA 58 70441410 70441428 CTAGGAGGACTACAATGCC 58 NA Mus musculus 50 Stxbp5l ENSMUSG00000022829 ENSMUST00000114787,ENSMUST00000096074 3 2 10 114 16 37174438 37186747 TTCCTATCAGAGCTTAACAGAG 59 37142495 37142513 CTGAGAGGTTGGACTTGTG 59 NA Mus musculus 50 Srbd1 ENSMUSG00000024135 ENSMUST00000095187 3 1 3 84 17 86450475 86450494 CGTGTTCAAGATCCATTAGC 58 86403278 86450428 TCTGGGATACATCATGCTG 58 NA Mus musculus 50 Ppp2r2b ENSMUSG00000024500 ENSMUST00000069341,ENSMUST00000025377,ENSMUST00000091918 2 3 3 80 18 42822816 42822835 ATGACCAGAGACTATCTGAC 57 42808411 42822773 GTCATGAACCTGGTATGTC 57 NA Mus musculus 50 6330577E15Rik ENSMUSG00000025066 ENSMUST00000099353,ENSMUST00000099354,ENSMUST00000099352 1 3 3 90 19 47808394 47809326 GAATAAAGAACGACGTGACTG 59 47809378 47809396 ATGATAGACTGCAGCTCAC 59 NA Mus musculus 50 Stra13 ENSMUSG00000025144 ENSMUST00000055424,ENSMUST00000106154,ENSMUST00000106155,ENSMUST00000026137 2 4 4 129 11 120573023 120573041 GAGTTCCTGAGGATCTTCG 59 120572605 120572706 TCTAGAAGTCCAGGAGCAG 59 NA Mus musculus 50 Mrpl43 ENSMUSG00000025208 ENSMUST00000097715,ENSMUST00000052320 2 2 2 74 19 45080424 45080564 TGGCCGAATACCTTAATGG 59 45080368 45080386 CCAACGACTTGATCTCCTC 59 NA DesignRelaxed Mus musculus 50 Parp6 ENSMUSG00000025237 ENSMUST00000026267 3 1 2 81 9 59489605 59496643 TTTGGATACTCAGGAATGGG 59 59496684 59496705 TGTTCATCCTGTTGTATCTCTG 59 NA Mus musculus 50 Apool ENSMUSG00000025525 ENSMUST00000026599,ENSMUST00000113414 3 2 3 183 X 109477867 109478076 GGAAGAAAGCAAGGAAGGA 59 109485846 109485864 ATCATCTGGATGAGACTGC 58 NA Mus musculus 50 Gria4 ENSMUSG00000025892 ENSMUST00000027020 3 1 2 109 9 4424447 4432783 GTGACTCCAAGGACAAGAC 59 4424356 4424375 GAACTCTATCAAAGCCACCA 59 NA Mus musculus 50 Idh1 ENSMUSG00000025950 ENSMUST00000027087 2 1 2 111 1 65207625 65207643 TGCATTAAAGGCTTACCCA 59 65206036 65206057 ACCTTAAAGTTTGCTGAGCT 59 NA Mus musculus 50 Col9a1 ENSMUSG00000026147 ENSMUST00000054588,ENSMUST00000088349,ENSMUST00000115252 2 3 4 97 1 24246147 24246165 GAGAATGGTTTCCCTGGTC 59 24246226 24251206 CCCAAGTCTCCTTTAGGTC 58 NA Mus musculus 50 Col9a1 ENSMUSG00000026147 ENSMUST00000054588,ENSMUST00000084261 2 2 4 83 1 24186132 24186153 CCAATTCCATTTCTAATGGTGG 59 24186197 24186328 AAATCAGGTCAAACCCTGG 59 NA Mus musculus 50 Chit1 ENSMUSG00000026450 ENSMUST00000112256,ENSMUST00000086475 2 2 4 80 1 136047113 136047131 GATGACTTCAAGGGTTCCT 58 136047173 136047691 GGATGGAAGATTTAGTTCCTG 58 NA Mus musculus 50 Suv39h2 ENSMUSG00000026646 ENSMUST00000027956,ENSMUST00000100458 2 2 4 80 2 3379892 3381549 ATGTTGGAGAGGTGATCAC 58 3379830 3379848 CAAAGAGGTAGGTGATCCC 59 NA Mus musculus 50 Plxdc2 ENSMUSG00000026748 ENSMUST00000028081,ENSMUST00000114703,ENSMUST00000114702 1 3 3 80 2 16591153 16591174 CGAGTAGAACTACAAATGTCCA 59 16591214 16591466 ATTGAACTGGAGACATGTGG 59 NA Mus musculus 50 Zbtb43 ENSMUSG00000026788 ENSMUST00000028125,ENSMUST00000095035,ENSMUST00000113156 1 3 3 60 2 33309601 33309619 AATTGGACACAAACAGGAG 57 33309559 33309578 CGCCATTTCAATATTCTCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Slc2a8 ENSMUSG00000026791 ENSMUST00000028129,ENSMUST00000113192,ENSMUST00000113191 3 3 3 124 2 32830450 32830469 CCTCATGTCAGAGATCTTCC 59 32829240 32830363 GTCTGAGCATCTCCATGAC 59 NA InUTR Mus musculus 50 Upp2 ENSMUSG00000026839 ENSMUST00000059102,ENSMUST00000102755 3 2 3 186 2 58630417 58632422 TTTATGAAGGCCAAGGTCG 59 58642452 58642470 CTGTCAAGAAGTGTCACAC 58 NA DesignRelaxed Mus musculus 50 Traf1 ENSMUSG00000026875 ENSMUST00000028234,ENSMUST00000113064 2 2 2 80 2 34811765 34811784 ATCTGTCCTAAATGCAGAGC 59 34804613 34811723 ATCAGAGTGAACCTTCTCCT 59 NA Mus musculus 50 Nmi ENSMUSG00000026946 ENSMUST00000028314,ENSMUST00000112705 1 2 2 107 2 51808399 51811460 TTGAGAAGGAAGAAGTCGC 59 51808310 51808328 CTGTGTTTAGTGGGACTGG 59 NA Mus musculus 50 Anapc2 ENSMUSG00000026965 ENSMUST00000028341 3 1 2 135 2 25129441 25130194 GAGTTTCACAAGTGGATAGAG 58 25130290 25130309 AGAAGAATCTCTGTACGTGG 58 NA Mus musculus 50 Ppp1r14d ENSMUSG00000027317 ENSMUST00000110820,ENSMUST00000076084 3 2 2 82 2 119044503 119044521 AGATCAAAGGACACAGCTG 59 119044132 119044151 GTTGACTGAGTAGCTCAGAG 59 NA DesignNoJunction Mus musculus 50 Smox ENSMUSG00000027333 ENSMUST00000110189,ENSMUST00000110186,ENSMUST00000028806,ENSMUST00000110184,ENSMUST00000110183,ENSMUST00000110179,ENSMUST00000110188,ENSMUST00000110181,ENSMUST00000110180 2 9 10 109 2 131342085 131342103 TTTACTCCAAGAATGGCGT 59 131342175 131345845 GGTCATGTTATAGACCTCGT 58 NA Mus musculus 50 Gabpb1 ENSMUSG00000027361 ENSMUST00000110425,ENSMUST00000110424,ENSMUST00000103227,ENSMUST00000039978,ENSMUST00000103226,ENSMUST00000089745 1 6 10 144 2 126478079 126478097 AATCATCAAGAGGTGGTGG 59 126476341 126477971 GGTTCTGCATAGCAATCTG 58 NA Mus musculus 50 Tgm3 ENSMUSG00000027401 ENSMUST00000110299,ENSMUST00000028886 2 2 2 80 2 129864329 129867497 TACAAGTATCCAGAAGGTTCC 58 129867537 129867557 GAAAGATGCGTTAGGTTTGAG 59 NA Mus musculus 50 Nfatc2 ENSMUSG00000027544 ENSMUST00000074618,ENSMUST00000109186 1 2 7 138 2 168330056 168330074 GTCATCCAACAACAGACTG 58 168305741 168329955 TTTCATTAACGTCATCCAGG 57 NA Mus musculus 50 Atp9a ENSMUSG00000027546 ENSMUST00000109177,ENSMUST00000109176,ENSMUST00000109171,ENSMUST00000029060,ENSMUST00000109175,ENSMUST00000109170 3 6 6 84 2 168463196 168464579 ATCTATCAAGGGAGCACCA 59 168463130 168463148 ATGTGAAGGAGATTGCCAC 59 NA Nonspecific Mus musculus 50 Zfp64 ENSMUSG00000027551 ENSMUST00000109162,ENSMUST00000087971,ENSMUST00000045842,ENSMUST00000109161 3 4 5 60 2 168766392 168777058 TCAGACTATCACAGTTTCAGC 59 168766352 168766370 CAGGTAAGTTTGGTAGCCA 59 NA DesignRelaxed Mus musculus 50 Fxr1h ENSMUSG00000027680 ENSMUST00000001620,ENSMUST00000108197 1 2 4 82 3 33963171 33963189 TGATGAAGATGCTGTTCTG 57 33963234 33963907 TTTCACTATCATCTAGCCCA 57 NA Mus musculus 50 Evi1 ENSMUSG00000027684 ENSMUST00000108270,ENSMUST00000029230 3 2 3 93 3 29879872 29884273 GCCCTTTATCTGTGAGGTC 59 29879797 29879816 GATTTGGGTTCTGCAATCAG 59 NA Mus musculus 50 Nola1 ENSMUSG00000028010 ENSMUST00000029643,ENSMUST00000106366 1 2 2 146 3 129532403 129533524 AACGTGTCGTCTTGTTAGG 59 129532275 129532294 ATATCTCATCCACTTTCCCG 58 NA Mus musculus 50 4930547C10Rik ENSMUSG00000028314 ENSMUST00000029995,ENSMUST00000107671,ENSMUST00000107673 2 3 3 60 4 52623834 52623853 TAAAGCAGTCCAAGAAGACC 59 52623876 52623894 TGTTTCAAGCCAGAGTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Col15a1 ENSMUSG00000028339 ENSMUST00000102917,ENSMUST00000082303,ENSMUST00000107732,ENSMUST00000107731,ENSMUST00000107730 1 5 6 80 4 47316794 47319589 GATCCAGAAACTTGGTCAC 58 47319632 47319651 TGAATGTCCCTTCTATGACC 58 NA Mus musculus 50 B4galt1 ENSMUSG00000028413 ENSMUST00000030121,ENSMUST00000108096 2 2 2 85 4 40759902 40770486 TACGTCATCAATCAGGCTG 59 40759835 40759853 TCATAGTCCTTCAAGGCCT 59 NA Mus musculus 50 Ak3l1 ENSMUSG00000028527 ENSMUST00000102780,ENSMUST00000106946,ENSMUST00000030252,ENSMUST00000106945,ENSMUST00000106948 3 5 6 80 4 101119875 101133113 CTGTTAGATGGATTCCCGA 58 101133155 101133175 CAAACTGATTACTAGGTCCAC 58 NA Nonspecific Mus musculus 50 Pqlc2 ENSMUSG00000028744 ENSMUST00000105801,ENSMUST00000053862,ENSMUST00000094564 2 3 3 99 4 138856995 138857013 ACAAAGAAGGAGGTCATCG 59 138856314 138856932 ACTGCCGTATGAAATTGGT 59 NA Mus musculus 50 Trspap1 ENSMUSG00000028898 ENSMUST00000105961 2 1 5 189 4 131870281 131881139 AAACAGCCAGACAATAGGA 58 131869932 131870129 CTTCATATGTCTGCATGGTG 58 NA Mus musculus 50 Dnajb6 ENSMUSG00000029131 ENSMUST00000114839 1 1 3 91 5 30092178 30092873 CGACAAAGAGGATTGTGGA 59 30092925 30092946 GTGCTCCTTACCATTTATTGTC 59 NA Nonspecific Mus musculus 50 Cux1 ENSMUSG00000029705 ENSMUST00000111111 1 1 3 81 5 136788561 136788579 ATGAAGCAGTTCCTGTCTG 59 136785704 136788517 GGGTAGTGATGTTACCTCTC 58 NA Mus musculus 50 Hrbl ENSMUSG00000029722 ENSMUST00000100544,ENSMUST00000031736 2 2 2 88 5 138093735 138095000 CAGCAGAATGGATCTTCCT 59 138093665 138093683 GGATTGGTAGAGATCCCAG 58 NA Mus musculus 50 Tsc22d4 ENSMUSG00000029723 ENSMUST00000100540 1 1 4 81 5 138192586 138199919 GATGACGATAGTGGTTCCG 59 138203607 138203625 CTAGGTGTTTCCAGAACGG 59 NA Mus musculus 50 Dync1i1 ENSMUSG00000029757 ENSMUST00000115556,ENSMUST00000115559,ENSMUST00000031771 2 3 5 64 6 5719783 5734448 ATTAACAAGGACCCTGCAG 59 5734476 5734494 GTTCTGAGTCTGACTGCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Adamts9 ENSMUSG00000030022 ENSMUST00000113438,ENSMUST00000049189 3 2 2 84 6 92746229 92746353 CCGCTAAAGGTATTCTGTG 57 92746163 92746181 AGAAGTTCTCTGAGTCACC 58 NA Mus musculus 50 Frmd4b ENSMUSG00000030064 ENSMUST00000113355,ENSMUST00000113359,ENSMUST00000032146 2 3 3 80 6 97255190 97255208 TTCCATCAACGAATACCGA 58 97252327 97255146 GGAATGATGTCTTCTGGTG 57 NA Mus musculus 50 Klrc1 ENSMUSG00000030167 ENSMUST00000032270 2 1 2 86 6 129628317 129628336 AATTACTACAGTTGCCACAC 58 129627328 129627791 GTGTAGTTTATATCTCTGTGGG 57 NA Mus musculus 50 Fus ENSMUSG00000030795 ENSMUST00000106249 3 1 3 81 7 135115779 135115797 TACAACAGTAGCAGTGGAG 58 135123751 135124715 TCTCACATGTAGGATTAGGAC 58 NA Mus musculus 50 Zranb1 ENSMUSG00000030967 ENSMUST00000106157,ENSMUST00000033265 3 2 2 85 7 140158302 140158320 TGATGTTGGCTACACTCTG 59 140158368 140162878 GCTGAGATACCTCTGTAAGC 59 NA Mus musculus 50 Slc25a14 ENSMUSG00000031105 ENSMUST00000114938 3 1 4 84 X 45978790 45978809 AACCAGAATTTCCTGACCAG 59 45981351 45982437 TTTCTGATGTAGTCGTGGC 59 NA Mus musculus 50 Hdac6 ENSMUSG00000031161 ENSMUST00000115642,ENSMUST00000033501 2 2 2 81 X 7520815 7520833 CCAGTACATGAATGAAGGG 57 7520596 7520770 ACAGGAATATGAGTTCGGA 57 NA Mus musculus 50 Tbx22 ENSMUSG00000031241 ENSMUST00000068451,ENSMUST00000113456 2 2 4 179 X 104875650 104876495 GAGATCATTCTGCAGTCCA 59 104876638 104876986 CAGTTTGGTAATCTGCTGG 58 NA Mus musculus 50 Btk ENSMUSG00000031264 ENSMUST00000113213,ENSMUST00000113214 2 2 3 155 X 131082159 131089013 CAGTATTACCTGGCAGCTC 59 131081291 131081309 CATAAGCACTTCTGGTGGA 59 NA Mus musculus 50 Uchl5ip ENSMUSG00000031371 ENSMUST00000033737 2 1 2 103 X 70694238 70698352 CAGGATCTTCTAATGGGCC 59 70694153 70694171 GAACTACTGGAGCATCCAG 59 NA Mus musculus 50 Irak1 ENSMUSG00000031392 ENSMUST00000114352,ENSMUST00000068286,ENSMUST00000114360,ENSMUST00000114339,ENSMUST00000033769,ENSMUST00000114354,ENSMUST00000114353,ENSMUST00000073369,ENSMUST00000101458 2 9 13 80 X 71267297 71267537 GAACAGCTATCAAGGTTTCG 58 71267236 71267254 AACAAGGCAGTATAAGCCA 58 NA Mus musculus 50 Tpte ENSMUSG00000031481 ENSMUST00000077194,ENSMUST00000068928 1 2 3 105 8 23395432 23407642 CTATGGGTATGACATGCCTG 59 23413292 23413310 AATGGTCCTTGAAGCACTC 59 NA Mus musculus 50 Cd209a ENSMUSG00000031494 ENSMUST00000111031 2 1 2 98 8 3747023 3748333 CTTGTCAAAGATCGACTGTG 58 3746944 3746962 ATCATTCCAGGACTTCTGG 58 NA Mus musculus 50 Adam3 ENSMUSG00000031553 ENSMUST00000069723,ENSMUST00000033958 3 2 2 84 8 25791904 25791922 AGACCAGAACTTCATGACG 59 25791211 25791857 GTCTTCTGGTATTGATCGGT 59 NA Mus musculus 50 Ash2l ENSMUSG00000031575 ENSMUST00000068892,ENSMUST00000110610,ENSMUST00000110609 3 3 3 95 8 26929022 26929041 ATCTCACTGTACAAGAGCTG 59 26927969 26928082 CATGTCACTCATAGGGTGG 59 NA Mus musculus 50 Nr3c2 ENSMUSG00000031618 ENSMUST00000109913,ENSMUST00000109912 2 2 4 133 8 79609564 79679119 AGGACAACACAACTATCTGTG 59 79679214 79709689 TCTTTGACTTTCGAGCTCC 59 NA Mus musculus 50 Cbln1 ENSMUSG00000031654 ENSMUST00000034076 3 1 1 123 8 89995591 89995609 CAACAGACAGACCATCCAG 59 89994246 89994265 TTTCTCCATCTGGATGAGGA 59 NA DesignNoJunction Mus musculus 50 Irx3 ENSMUSG00000031734 ENSMUST00000093312,ENSMUST00000095002 1 2 2 70 8 94323324 94323342 ACTCAAGACAGCTTTCCAG 59 94322838 94322856 CTGATAAGACCAGAGCAGC 59 NA DesignNoJunction Mus musculus 50 Paqr5 ENSMUSG00000032278 ENSMUST00000034817,ENSMUST00000113990 1 2 2 89 9 61816650 61816668 CTGCAGTACCTTCCATGAG 59 61811623 61816597 TCAAGAAACCTGGAGTAGC 58 NA Mus musculus 50 AI118078 ENSMUSG00000032313 ENSMUST00000085754,ENSMUST00000034862 3 2 2 109 9 55262876 55265824 GTCATTGATGCCTATGTCCT 59 55265896 55265914 ATTTGCGTCAGTCTTTCCA 59 NA Mus musculus 50 Ankrd15 ENSMUSG00000032702 ENSMUST00000078392 3 1 2 153 19 25496802 25496820 CAGATGACCAGATAGCCAC 59 25497514 25500401 TCACTTAGTTCATACCCGC 59 NA Mus musculus 50 Ctdspl2 ENSMUSG00000033411 ENSMUST00000099470 3 1 7 81 2 121819153 121819409 AGATGTCATTTATCAGCAGG 57 121819453 121819471 AAATCCCAGTCTTAACGTG 57 NA Mus musculus 50 Armcx1 ENSMUSG00000033460 ENSMUST00000113197 3 1 6 121 X 131252993 131253471 TATAAGTGGTGCCTGTATCTG 59 131254186 131254206 GATCCAAGAAGTTTCTTCCTC 58 NA InUTR Mus musculus 50 Sfxn5 ENSMUSG00000033720 ENSMUST00000045846 1 1 2 80 6 85165732 85179198 AGATGTCAGAGATTGAAACC 57 85165671 85165690 CCTTATTGTACACCACTGTC 57 NA Mus musculus 50 St18 ENSMUSG00000033740 ENSMUST00000115503,ENSMUST00000115501,ENSMUST00000043578,ENSMUST00000115499,ENSMUST00000115497 2 5 5 80 1 6835863 6838995 ACCCACAGAAGCTTATCTG 58 6839034 6839057 GATAGTCATTAGTTCCTCAGAGAC 59 NA Mus musculus 50 Mast4 ENSMUSG00000034751 ENSMUST00000091273 1 1 2 80 13 103532078 103532097 CAGGAGAAACAGTTACAAGG 58 103524953 103532037 CTCCTCCTTCTTTCTAGACTC 58 NA Mus musculus 50 Unc13a ENSMUSG00000034799 ENSMUST00000066644 3 1 2 95 8 74189761 74189779 CCACTAAGGACTGCTTCAG 59 74188376 74189107 CACCCAGAGTTGAATCTCC 59 NA Mus musculus 50 BC031353 ENSMUSG00000034858 ENSMUST00000038437 2 1 2 80 9 74850685 74852080 CGTTTGAGAAATGCCTTGG 59 74852124 74852142 TTCAGTTATCAGCAAGGCC 59 NA Mus musculus 50 Sidt2 ENSMUSG00000034908 ENSMUST00000038488 2 1 2 144 9 45753865 45754843 TCCTACAGTTACCAGGACC 59 45753433 45753757 AGAGGTATTGCTTGGTTCG 59 NA Mus musculus 50 Arx ENSMUSG00000035277 ENSMUST00000113947,ENSMUST00000046565 2 2 2 71 X 90532072 90532091 CAATCAGTACCAGGAAGAGG 59 90532125 90532143 GAGGAGAGCAAAGTTGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nfkbiz ENSMUSG00000035356 ENSMUST00000114457,ENSMUST00000114458,ENSMUST00000036273 3 3 4 80 16 55815803 55815823 TACTAAGGAATAAGAGCCTGG 58 55814455 55815761 TCTTACGATCCTTTGCCTC 59 NA Mus musculus 50 Stab2 ENSMUSG00000035459 ENSMUST00000099391 2 1 3 95 10 86381603 86381768 TCAACAAGACTCTCATGGAG 59 86381527 86381545 GGTCACATATGACAGAGGC 59 NA Mus musculus 50 1700021K19Rik ENSMUSG00000035629 ENSMUST00000089684,ENSMUST00000040986,ENSMUST00000115105 3 3 3 115 16 32847401 32847925 TTCTACACAGAAACTGCCT 58 32847304 32847322 ATGGATGCATCGATCTGAG 59 NA Mus musculus 50 4930432H15Rik ENSMUSG00000036013 ENSMUST00000114835,ENSMUST00000039864 1 2 2 81 X 50630973 50635712 GGATTTGGTGATAATTCACAGG 59 50635754 50635772 CATGCTGATTCAGAAAGGG 58 NA Mus musculus 50 Zranb3 ENSMUSG00000036086 ENSMUST00000086614,ENSMUST00000112539,ENSMUST00000037426,ENSMUST00000097598 1 4 4 80 1 129933199 129937406 AACTGACATTGGGAGAATCC 59 129933138 129933156 AGCAAAGTCTCTGCATCTG 59 NA Nonspecific Mus musculus 50 6430550H21Rik ENSMUSG00000036502 ENSMUST00000089054 1 1 3 98 X 35578289 35586287 GACACATTGTCATAACTTCCTC 59 35577828 35577846 TAAGTTGAGGGCAGTTCAC 59 NA Mus musculus 50 Trim3 ENSMUSG00000036989 ENSMUST00000106789,ENSMUST00000057525 1 2 4 126 7 112759941 112759959 CTCTTCAAATTTGGCTCGC 59 112759715 112759851 TGTCGAATACCTGTATGCG 59 NA Mus musculus 50 Azin1 ENSMUSG00000037458 ENSMUST00000065308,ENSMUST00000110329 3 2 2 85 15 38420216 38421238 AGTGATTGGTATGAGATGCA 58 38420150 38420168 AGCTGAATACAAGAGGGTG 58 NA Mus musculus 50 Inpp4b ENSMUSG00000037940 ENSMUST00000109853 1 1 4 80 8 84595719 84646507 TAGATTGCATGAGAAGAGAAGG 59 84646547 84646566 GCATGTTGAAAGCATACCTC 59 NA Mus musculus 50 Opa1 ENSMUSG00000038084 ENSMUST00000038867 1 1 2 98 16 29588427 29588445 AAGGACTTCTTCACTGCAG 59 29589828 29602309 TTTGTCTGACACCTTCCTG 59 NA Mus musculus 50 AW551984 ENSMUSG00000038112 ENSMUST00000042485 2 1 2 81 9 39406907 39406926 TTCTATAGGAAGGTGCACAG 58 39405651 39406865 GTGCTCCCATTAAACTATCTG 58 NA Mus musculus 50 Gngt2 ENSMUSG00000038811 ENSMUST00000107712,ENSMUST00000107714,ENSMUST00000107711,ENSMUST00000100532,ENSMUST00000036088,ENSMUST00000107709,ENSMUST00000107708 3 7 7 96 11 95706447 95706809 GTGATCTGATTTCCAAGACAG 58 95706867 95706885 TTCTTGTCTTCTGGGATGC 59 NA Mus musculus 50 Ldb2 ENSMUSG00000039706 ENSMUST00000070748 2 1 2 80 5 44864741 44870339 AGGTACCTGATGTGATGGT 59 44864679 44864698 TAGTGATTAGCCTTTCGTCC 59 NA Mus musculus 50 Rapgef1 ENSMUSG00000039844 ENSMUST00000048301 2 1 4 90 2 29586056 29586074 CTGTACTGTGAAGCCTTCC 59 29586125 29588360 AGAACTTCTCATATCGGTACTG 59 NA Mus musculus 50 Negr1 ENSMUSG00000040037 ENSMUST00000041425 2 1 2 115 3 156823597 156823615 GATCCATCCTCACAGTGAC 59 156823694 156833867 AATGGAACTCTGGTTGAGG 59 NA Mus musculus 50 Plekha1 ENSMUSG00000040268 ENSMUST00000106198,ENSMUST00000048180 2 2 3 82 7 138025893 138040850 TTTCAAAGGTACCAAAGCAG 58 138040895 138040913 CACTTGCTTCTTACCACAG 58 NA Mus musculus 50 Limd2 ENSMUSG00000040699 ENSMUST00000045923,ENSMUST00000064545,ENSMUST00000106875 3 3 3 123 11 106020379 106020484 CGGTCTAAGTCCTTTAGCT 58 106020274 106020293 AACAGAAACAAGAGTTGTGG 58 NA Mus musculus 50 Rfx3 ENSMUSG00000040929 ENSMUST00000046898,ENSMUST00000099533,ENSMUST00000112613 3 3 3 80 19 27900634 27905112 ATTAGGCACTAGAGGAAACTC 58 27900574 27900593 TCTTGTAGACGGTTAAGAGG 58 NA Mus musculus 50 Rap1gap ENSMUSG00000041351 ENSMUST00000063471,ENSMUST00000105835,ENSMUST00000047243,ENSMUST00000105833 2 4 6 114 4 137260075 137265813 ACCCTAAGAACACAGATCTG 58 137267567 137267585 TAGGGAATGTAGTCCTCCT 58 NA Mus musculus 50 BC055324 ENSMUSG00000041406 ENSMUST00000097493,ENSMUST00000045876,ENSMUST00000111491 3 3 3 80 1 165887669 165887688 TGATCGTCAACAAGAATTGG 58 165887024 165887626 CTTCATGCTTTGTTCCCTC 58 NA Mus musculus 50 Paqr6 ENSMUSG00000041423 ENSMUST00000079359,ENSMUST00000107546 1 2 2 183 3 88171280 88171617 TCGACTATATTGGCCACAG 58 88171764 88171782 AACAGGTTCCCAATCACTG 59 NA Nonspecific Mus musculus 50 Stx3 ENSMUSG00000041488 ENSMUST00000069285,ENSMUST00000112965,ENSMUST00000112964 2 3 5 98 19 11857586 11857605 GAGTTGAATGTCATGCACAC 59 11856162 11857526 TATCAATTTCTTCCGAGCCT 58 NA Mus musculus 50 Gck ENSMUSG00000041798 ENSMUST00000102920,ENSMUST00000036050 2 2 4 181 11 5811013 5849561 AAAGGTAGAGCAGATCCTG 58 5810421 5810869 GAAAGTCTCCAACTTCTGAG 57 NA Mus musculus 50 Ptpre ENSMUSG00000041836 ENSMUST00000073961 1 1 3 80 7 142843517 142843778 CCTACTTCTTCAGGTTCCG 59 142843821 142843840 CTTCTAAGATCCCGTTAGGC 59 NA Mus musculus 50 Itga1 ENSMUSG00000042284 ENSMUST00000061673 1 1 2 80 13 115771034 115771052 AAAGATAGCTGCGAATCCA 59 115767876 115770990 GAAGTTAACCACGTCTCCT 58 NA Mus musculus 50 Atxn2 ENSMUSG00000042605 ENSMUST00000111762 2 1 3 108 5 122229591 122233870 GAGTAGTTAATGGAGGACCC 58 122233939 122233959 ACAAATTCTAGGCCACTAGAC 59 NA Mus musculus 50 Mgat5b ENSMUSG00000043857 ENSMUST00000054088,ENSMUST00000103027,ENSMUST00000092400 3 3 3 88 11 116839143 116839386 AGGCCAAGCTCTTTATAGG 58 116839438 116839456 AGACTGTAGGAAGATGCAG 58 NA Mus musculus 50 A830010M20Rik ENSMUSG00000044060 ENSMUST00000100951,ENSMUST00000060553,ENSMUST00000112672 2 3 4 133 5 107933025 107933532 CAACTGCAGCAGTAAAGTC 59 107934025 107934043 ACTAAGTCCTTTGCCATCC 59 NA Mus musculus 50 Cd300d ENSMUSG00000044811 ENSMUST00000061637,ENSMUST00000092464 2 2 2 128 11 114861957 114861975 TTGAGTTGTCTGTGGTTCC 59 114859554 114859572 TTGTGTCATCTGTGGTCAC 59 NA DesignNoJunction Mus musculus 50 Syt16 ENSMUSG00000044912 ENSMUST00000065968 1 1 3 93 12 75263784 75263802 AGACCATCACTCTGAGAGG 59 75263859 75323582 CCCAAAGCTGTTAACTTGC 59 NA Mus musculus 50 Prrt3 ENSMUSG00000045009 ENSMUST00000057429,ENSMUST00000101059 1 2 2 93 6 113447326 113447344 CTTGGAGGACAAGATTCCC 59 113447064 113447269 CATTCAGCGAGGATACTGG 59 NA Mus musculus 50 Sh2d5 ENSMUSG00000045349 ENSMUST00000105824,ENSMUST00000062126,ENSMUST00000105823,ENSMUST00000116271 2 4 5 187 4 137810658 137810677 GGTCTCAAGATCTACAGTGG 59 137811606 137812638 AGGATATGGACCTCTCCAG 59 NA Mus musculus 50 Trrap ENSMUSG00000045482 ENSMUST00000100467,ENSMUST00000038980 2 2 4 106 5 145600458 145601218 TTACCAGGCTATTGTGACTG 59 145601286 145601305 CATACTGGATGATGGCAGAG 59 NA Mus musculus 50 Spsb4 ENSMUSG00000046997 ENSMUST00000064445 1 1 2 88 9 96896049 96896067 GAAACTATACCCGGTGGTG 59 96895979 96895997 GACTAGGACACTTACGGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pdha2 ENSMUSG00000047674 ENSMUST00000057860 3 1 1 60 3 140874054 140874072 CCTTGTGGAAATTACCCTG 57 140874012 140874031 GAGGTTCCCATTCCATAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dleu7 ENSMUSG00000048281 ENSMUST00000063169 2 1 1 60 14 62895913 62895931 TAGAAACATCTGCAGTCAC 57 62895871 62895889 CAAGTCTCTGTCAAACTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Myoz3 ENSMUSG00000049173 ENSMUST00000056533 1 1 1 185 18 60738639 60738657 TACCAAGACTACTCGAGTG 57 60736055 60736073 GTTGAAATTGGGTCTGAGG 58 NA DesignNoJunction Mus musculus 50 2310061F22Rik ENSMUSG00000049482 ENSMUST00000116412,ENSMUST00000054465 1 2 2 80 8 125003030 125003049 TTGTCTAGGTTGTTCAGCTC 59 125003092 125003192 CACAATCAGATGGGTCCTC 59 NA Mus musculus 50 D130029J02Rik ENSMUSG00000050357 ENSMUST00000093200,ENSMUST00000062574 3 2 2 93 8 108219665 108220770 GAGGAAGCAAAGTAAAGACG 58 108220952 108220970 CTTGATTGAGATGGGAGGG 59 NA Mus musculus 50 Sept6 ENSMUSG00000050379 ENSMUST00000115232 3 1 5 119 X 34529454 34529472 TCTTCTGTTTCCTGTGCAG 59 34515152 34515170 GACAGTTCGACAATCTTCG 58 NA DesignNoJunction Mus musculus 50 Ttc24 ENSMUSG00000051036 ENSMUST00000050258,ENSMUST00000064550 3 2 2 94 3 87874310 87874328 ACAACCCATCTTCCATCTG 59 87874022 87874252 GTGGATGACCTACTGACTC 58 NA Mus musculus 50 Ercc6l ENSMUSG00000051220 ENSMUST00000056904 3 1 1 60 X 99340135 99340155 GACTCTCAGTACATTCATCAG 57 99340095 99340114 GAGACTCAGATTCAACAAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Bbs12 ENSMUSG00000051444 ENSMUST00000057975,ENSMUST00000108121 2 2 2 60 3 37218525 37218544 CCGTTATTGTCCACTTACAG 58 37218566 37218585 GTTTGAAGAATTTGGGTGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Btla ENSMUSG00000052013 ENSMUST00000063654,ENSMUST00000102802 1 2 3 90 16 45239399 45239418 GATAATGGGTCGTATAGCTG 57 45239471 45242830 TTTGAGTCCTTTCTGTCAC 57 NA Mus musculus 50 Immt ENSMUSG00000052337 ENSMUST00000114151 1 1 4 119 6 71802758 71802776 AGGTGATACACTTTCGGTC 58 71802859 71806921 AAACTCTTGGCTAGAGCTG 59 NA Mus musculus 50 Casc3 ENSMUSG00000052915 ENSMUST00000037915 2 1 4 83 11 98661670 98661688 CTCCAAAGAAGGAGGAGAC 58 98663620 98664104 AAGAAGGAACAGCCAAGAC 59 NA Mus musculus 50 Zfp78 ENSMUSG00000055150 ENSMUST00000108559,ENSMUST00000086323 1 2 3 80 7 6328255 6328275 ATCTCCTTATTGGAACATGGG 59 6328314 6330929 AGATTTACCACCTTGTACTCTG 59 NA Mus musculus 50 Usp26 ENSMUSG00000055780 ENSMUST00000114869,ENSMUST00000069509 1 2 2 107 X 49110640 49118339 AGTCTCTGGTAAACTTGGG 58 49110551 49110571 GCATTTATCAATATGGGCTCC 59 NA InUTR Mus musculus 50 R3hdm1 ENSMUSG00000056211 ENSMUST00000036288,ENSMUST00000097596 3 2 2 81 1 130075501 130075520 GTGAAGACTTTCAGAAACGA 58 130075564 130075677 AAACGTATTCTCATCTGGC 57 NA Mus musculus 50 Gm1008 ENSMUSG00000056824 ENSMUST00000103085,ENSMUST00000109281,ENSMUST00000073062 2 3 3 98 2 165183980 165183998 CTGAGCTGATATGCAAGCT 59 165179539 165179559 CATTTGTTGTCATGGTATCGG 59 NA DesignNoJunction Mus musculus 50 Rpgrip1 ENSMUSG00000057132 ENSMUST00000111600 1 1 3 176 14 52760900 52765409 ATCAAACAGCTGGAAGGAG 59 52765549 52766893 GGATCTGGACTCATTGCTC 59 NA Mus musculus 50 Whsc1 ENSMUSG00000057406 ENSMUST00000114396 2 1 4 60 5 34211500 34211519 TCCTTCTGCATCCTTAACTG 59 34214070 34214088 GTCCAACTTGACTGATGTG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Nrg2 ENSMUSG00000060275 ENSMUST00000115713,ENSMUST00000115707,ENSMUST00000115705,ENSMUST00000115704 2 4 6 182 18 36205545 36205563 GAGAACATCCTTGGGAAGG 59 36192057 36197893 GTTTGGACATTTGCAGGAG 59 NA Mus musculus 50 Hist4h4 ENSMUSG00000060981 ENSMUST00000078578,ENSMUST00000102972 1 2 2 96 13 23622927 23622945 TAAGTAATGTGCCTGTGCC 59 23623005 23623023 CTTTGCCAAGACCTTTACC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rrp1 ENSMUSG00000061032 ENSMUST00000062678,ENSMUST00000092345,ENSMUST00000105386 1 3 3 82 10 77865442 77866257 TCCTCCAGTTTGACTACGA 59 77865378 77865396 CTTCCTGTTCTGAGAAGGG 59 NA Mus musculus 50 Tnnt3 ENSMUSG00000061723 ENSMUST00000105950,ENSMUST00000105953 3 2 20 107 7 149689969 149691422 AGAAGTCCAGGAGGAAGAG 59 149694255 149696586 ATCTTAGGAGCAGTAAGTTTGG 59 NA Mus musculus 50 Slc22a12 ENSMUSG00000061742 ENSMUST00000113452,ENSMUST00000071115,ENSMUST00000113451 2 3 3 85 19 6538790 6540337 TTATTCATGGTGGCTACCA 58 6538723 6538741 CTACCCTCTGTAGTTCCTG 58 NA Mus musculus 50 Ppp4r1 ENSMUSG00000061950 ENSMUST00000073104,ENSMUST00000112782,ENSMUST00000097293 1 3 3 83 17 66187070 66187088 GATTACCTACGACCCATCG 59 66187134 66187238 TTCACTGACCAACTTGTAGG 59 NA Mus musculus 50 Phactr2 ENSMUSG00000062866 ENSMUST00000105547,ENSMUST00000105543,ENSMUST00000105544,ENSMUST00000094661,ENSMUST00000079698 2 5 7 94 10 12981622 12981640 CTGAAGAAGGGAGTGACTC 58 12973672 12975120 GTGAGAAGAACCAGCTCTG 59 NA Mus musculus 50 Tmem16f ENSMUSG00000064210 ENSMUST00000071874 2 1 2 88 15 95742789 95743809 AGCAACAAGATCTGTTTCTG 58 95743860 95743878 GCATGATCTCAGCATAGGT 59 NA Mus musculus 50 Cntn4 ENSMUSG00000064293 ENSMUST00000089208,ENSMUST00000113264 3 2 6 140 6 106624633 106625732 GGTTATAACCTGGGAGACAG 59 106625835 106625853 CTGAACACGTATCTGGAGG 59 NA Mus musculus 50 9930111J21Rik ENSMUSG00000069892 ENSMUST00000101295,ENSMUST00000093152 1 2 2 87 11 48853311 48864393 CAGGAACAGTACCATCGAC 59 48853242 48853261 GAGGTCAAATCAGGATCCTC 59 NA Nonspecific, InUTR Mus musculus 50 Wfdc6b ENSMUSG00000070531 ENSMUST00000094346 3 1 1 156 2 164440441 164440459 CAGTGTTTACGACACAGAG 58 164442828 164442847 TGTCTTGGTTATACCACCAG 59 NA DesignNoJunction Mus musculus 50 C87414 ENSMUSG00000070686 ENSMUST00000101024 3 1 1 80 5 94066900 94066919 TAAAGATGAGGATCTGGGAC 58 94066839 94066857 ATTCTGTGATGTGCTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Arhgef10 ENSMUSG00000071176 ENSMUST00000084207 1 1 2 88 8 14942651 14942669 AAAGATGAGAGGCTTGGTG 59 14942721 14945292 TAAGCTTCTGCATCTTCCG 59 NA Mus musculus 50 AW555464 ENSMUSG00000072825 ENSMUST00000101018,ENSMUST00000092279 2 2 2 80 12 113981689 113981708 GACCAGAACATGAATGACAG 58 113981750 113981892 ATCAAAGATCACCTCCTCAC 59 NA Mus musculus 50 B3galt5 ENSMUSG00000074892 ENSMUST00000113800,ENSMUST00000099497 2 2 2 87 16 96535368 96536779 TCTTACTCGGCAAAGATGG 59 96536830 96536848 TGCTGAAGTACAAGCAGAG 59 NA InUTR Mus musculus 50 Tmem16c ENSMUSG00000074968 ENSMUST00000099623,ENSMUST00000111019 2 2 3 80 2 110537341 110537572 GGAATCTTCTTCATGATCTCCT 59 110537282 110537301 AAACTGTTCCATGACTACCA 58 NA Mus musculus 50 Olfr1079 ENSMUSG00000075179 ENSMUST00000111582 1 1 2 94 2 86380192 86380211 CCATCCTGTAGGATGTACAC 59 86379033 86379051 TCAGTCACTACTGTGAGGT 59 NA DesignNoJunction, InUTR Mus musculus 50 Fnbp1 ENSMUSG00000075415 ENSMUST00000113564,ENSMUST00000113562,ENSMUST00000113561,ENSMUST00000073879,ENSMUST00000113560,ENSMUST00000100208,ENSMUST00000075326,ENSMUST00000100207,ENSMUST00000113555 1 9 12 80 2 30892107 30892126 CAGAGTGGACTGTATGATGG 59 30891759 30892064 GTAACTACCATCTGGGCTC 59 NA Nonspecific Mus musculus 50 Wfdc3 ENSMUSG00000076434 ENSMUST00000109328,ENSMUST00000103096 2 2 2 139 2 164556985 164557525 GCTTTAATTCTAAACTGGAGGC 59 164556867 164556886 AGTAGCAGTAGATACGAGGA 58 NA InUTR Mus musculus 50 TRAV6-1 ENSMUSG00000076762 ENSMUST00000103571 3 1 1 60 14 53258206 53258224 CTTTAGTGACTGTGATGCT 57 53258358 53258376 ATCTGGGTTACTGAGTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 0610010B08Rik ENSMUSG00000078870 ENSMUST00000108965,ENSMUST00000099003,ENSMUST00000108964 2 3 3 63 2 176980441 176980459 GAGTCTCTACAAGGGTGTG 59 176980191 176980417 CCAAATGTAACCTATAGCTGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 A2AK42_MOUSE ENSMUSG00000079248 ENSMUST00000111733,ENSMUST00000111731 1 2 2 60 2 83820882 83820901 ACATGGGTCTTCCTAAACTG 59 83820924 83820942 TCAAAGAATGGCTGGAGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Phyhd1 ENSMUSG00000079484 ENSMUST00000091132,ENSMUST00000102860,ENSMUST00000113647,ENSMUST00000113645,ENSMUST00000113648,ENSMUST00000113643 2 6 7 111 2 30125347 30125365 GATGAGCAACTTCAAACCC 59 30130059 30130210 GGACCAAGAAATTTCCTTTCTC 59 NA Mus musculus 50 Phyhd1 ENSMUSG00000079484 ENSMUST00000091132,ENSMUST00000102860,ENSMUST00000113647,ENSMUST00000113645,ENSMUST00000113648,ENSMUST00000113643 1 6 7 110 2 30125348 30125366 ATGAGCAACTTCAAACCCA 59 30130059 30130210 GGACCAAGAAATTTCCTTTCTC 59 NA Mus musculus 50 Pbsn ENSMUSG00000000003 ENSMUST00000000003,ENSMUST00000114041 2 2 2 87 X 75087858 75087876 TGTACAGCGTATCATGGAC 59 75083441 75087207 GTCATCTGTAATGCTAATCCTG 58 NA InUTR Mus musculus 50 Gmpr ENSMUSG00000000253 ENSMUST00000000260 2 1 1 85 13 45609814 45609832 AGGGATTCCCATCATTGTG 59 45609881 45612383 CTGTAAACATGGCATGCTG 59 NA Mus musculus 50 Slc7a7 ENSMUSG00000000958 ENSMUST00000000984 2 1 1 88 14 54998898 55027347 CTGCATCTGTCTCTTAACCT 59 54998829 54998847 CCAACACCTTAGCATAGGT 58 NA Mus musculus 50 Epn2 ENSMUSG00000001036 ENSMUST00000001063,ENSMUST00000116368 3 2 6 108 11 61348851 61348871 GTATCCTCTGAGTTAGAGCAG 59 61348106 61348781 TTTCTGATGACTGCTCAGC 59 NA Mus musculus 50 Slc26a3 ENSMUSG00000001225 ENSMUST00000001254,ENSMUST00000110854 3 2 2 86 12 32133698 32133952 TATCTGTGGGTCCATTTCC 58 32134002 32134020 ACTCTGAAGAAGCATTGGG 59 NA Mus musculus 50 Mef2d ENSMUSG00000001419 ENSMUST00000107559,ENSMUST00000001455,ENSMUST00000107558 2 3 3 144 3 87972131 87972149 AGCTGGAGGATCCTATGAG 59 87972254 87972562 CTTTAATGTCCAAGTATCCAGC 59 NA Mus musculus 50 Sost ENSMUSG00000001494 ENSMUST00000001534 1 1 1 78 11 101828130 101828148 CTCCTGAGAACAACCAGAC 59 101825578 101828088 ACATCTTTGGCGTCATAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ifrd1 ENSMUSG00000001627 ENSMUST00000001672 1 1 1 82 12 40940614 40940632 AGACTCTTGGACCAATCCT 59 40939832 40940568 AAAGCAAGTTGCACAAGTC 59 NA Mus musculus 50 Eef1e1 ENSMUSG00000001707 ENSMUST00000001757 3 1 1 80 13 38747960 38747978 GTGGTTAGAGTTCAGGGTC 59 38746950 38747919 GAATTAAGATCCTTCAGCAGAG 58 NA Mus musculus 50 Gtf2f1 ENSMUSG00000002658 ENSMUST00000002733,ENSMUST00000066446 1 2 2 82 17 57147186 57147204 TGTCCTAAAGGAGTTTCGG 58 57146566 57147141 TAATGCCTTTGAACTTCCGT 59 NA Mus musculus 50 Med6 ENSMUSG00000002679 ENSMUST00000002756,ENSMUST00000101238 1 2 2 80 12 82692291 82692310 ATCCTTTCTATGACAGGACG 58 82690051 82692249 CAACCATCTGATTCAAGTGC 59 NA Mus musculus 50 Shkbp1 ENSMUSG00000003759 ENSMUST00000003857 1 1 1 85 7 28140604 28140622 TTACCTGGATCCCAGACTC 59 28140298 28140429 GATGAAGATAGCTCCGGTC 59 NA Mus musculus 50 Bax ENSMUSG00000003873 ENSMUST00000033093 3 1 1 134 7 52721486 52721600 TTGCTACAGGGTTTCATCC 59 52721370 52721388 CAGTTCATCTCCAATTCGC 58 NA Mus musculus 50 Ppan ENSMUSG00000004100 ENSMUST00000004203 1 1 1 86 9 20695085 20695104 GAACCTGAACACCATTAAGC 59 20695153 20695360 ACTTTGACGCTGTAGTGTC 59 NA Mus musculus 50 Prss16 ENSMUSG00000006179 ENSMUST00000006341 3 1 1 85 13 22094928 22095022 TGTTAATGGAGACACAGATCC 59 22094863 22094882 CACTAGGAATTAGAAGGGCT 58 NA Mus musculus 50 Qrich1 ENSMUSG00000006673 ENSMUST00000006851,ENSMUST00000112155 2 2 2 61 9 108421112 108421130 TAAGAACTCAGGACAAGCA 58 108421155 108430935 AGAGTCCTTAGGGTTCCAG 59 NA DesignRelaxed, InUTR Mus musculus 50 Rala ENSMUSG00000008859 ENSMUST00000009003 2 1 1 84 13 17988840 17988858 CACAAAGTCATCATGGTGG 58 17985152 17988792 AGTCCTCTACAAACTCGTC 58 NA Mus musculus 50 Tcfcp2 ENSMUSG00000009733 ENSMUST00000108921,ENSMUST00000009877,ENSMUST00000100199 2 3 3 80 15 100358967 100381765 ATAGTATGAGTGATGTCCTCG 58 100358907 100358927 GAATCTCGTTCTCATTATCGG 58 NA Mus musculus 50 Pou6f2 ENSMUSG00000009734 ENSMUST00000063256 3 1 2 130 13 18230935 18231393 TTAGTCAGCAGTGTCAGAG 58 18230823 18230841 TTGTTTGGAGATTTCCGTC 57 NA InUTR Mus musculus 50 Brf1 ENSMUSG00000011158 ENSMUST00000011302 1 1 1 82 12 114217949 114217968 GTTAACGTGTATGTGTTGGG 59 114211823 114217904 AAGCATGGGTCTATAGCTG 58 NA Mus musculus 50 Retn ENSMUSG00000012705 ENSMUST00000012849 1 1 1 141 8 3656017 3656036 TGAAGAACCTTTCATTTCCC 57 3656140 3656920 ATTGCATTTGGAAACAGGG 58 NA Mus musculus 50 Ankrd52 ENSMUSG00000014498 ENSMUST00000014642 2 1 1 80 10 127820167 127820185 CTGGGTTTGACATCAACAC 58 127820228 127820424 GACACTCAACATTTCCTCCT 59 NA Mus musculus 50 Efr3a ENSMUSG00000015002 ENSMUST00000067248 1 1 3 239 15 65693298 65697450 ATGATGTGGTTAGCAACAC 58 65700524 65700544 TCTTGTAGAGCATAGACTCTC 58 NA DesignRelaxed Mus musculus 50 Sertad4 ENSMUSG00000016262 ENSMUST00000016406 3 1 1 116 1 194677232 194677250 GGTACCAAACACTATGGGA 58 194676049 194677152 TGTAATGTGATCCTGCCAG 59 NA Mus musculus 50 Atad5 ENSMUSG00000017550 ENSMUST00000108239,ENSMUST00000017694 2 2 2 81 11 79946737 79946756 CAATGAACTCACAGTCTGTG 58 79946798 79947540 GTCAGCATTGTCTAGATTAGC 58 NA Mus musculus 50 Ypel2 ENSMUSG00000018427 ENSMUST00000018571 2 1 1 83 11 86758172 86759443 CAACTCAGTAGTTAATGTGGG 58 86758109 86758127 CAGTAAATGTCTGCAACGG 59 NA Mus musculus 50 Calr3 ENSMUSG00000019732 ENSMUST00000109974,ENSMUST00000019876,ENSMUST00000109973 2 3 3 117 8 74955456 74958702 CAATCAGATGCAAGGTGGA 59 74955357 74955375 TCATACTCAATGCTGCCAG 59 NA Mus musculus 50 Iyd ENSMUSG00000019762 ENSMUST00000019896 2 1 1 95 10 6799438 6799457 AGAGATTATCGAAGAGGAGG 57 6794653 6799381 TTAATCCAGTTGGTTCTCAG 57 NA Mus musculus 50 Pctk2 ENSMUSG00000020015 ENSMUST00000069965 2 1 1 81 10 92679154 92679172 CTGATGAAGTCCAGTCACC 59 92679217 92680722 CGCTTATTCAAGTCCTCCA 59 NA Mus musculus 50 Socs2 ENSMUSG00000020027 ENSMUST00000020215 2 1 2 79 10 94875734 94877472 TCAAACAGGATGGTACTGG 58 94875673 94875691 AGAAAGTTCCTTCTGGAGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 2010107G23Rik ENSMUSG00000020083 ENSMUST00000064050 1 1 1 115 10 61571767 61571785 ATCTCCTTTCAGTGACCTG 58 61571670 61571688 TCATAAGCAGGAAGAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Actr2 ENSMUSG00000020152 ENSMUST00000000137 1 1 1 80 11 19977330 19980040 GTTGAGTCATATACACTTCCAG 58 19977271 19977290 CTGAAATAAAGCCTCTGGTG 58 NA Mus musculus 50 Mknk2 ENSMUSG00000020190 ENSMUST00000003433,ENSMUST00000072616,ENSMUST00000105337,ENSMUST00000105338 3 4 4 107 10 80131340 80131359 CTCTACATCCTGCTTAGTGG 59 80130861 80131270 CTCAAACAGCATGTTCTGG 59 NA Mus musculus 50 Papolg ENSMUSG00000020273 ENSMUST00000020513,ENSMUST00000102863 2 2 2 82 11 23785564 23790241 CAGTGAAAGTAAGAATCTCCCA 59 23785503 23785521 CTCCAAGCCTGTAAGATCC 59 NA Mus musculus 50 Sgcd ENSMUSG00000020354 ENSMUST00000077221 3 1 4 117 11 46896344 46939045 GAGTCTTAGGAGCTGAAGG 58 46794401 46794420 GCTTCCATCACTAGAGATCG 59 NA Mus musculus 50 Myl7 ENSMUSG00000020469 ENSMUST00000102921 2 1 1 80 11 5798231 5798440 GAATTCAAGGAAGCCTTCAG 58 5798170 5798188 GGAATAGGTCTCCTTCAGG 58 NA Mus musculus 50 D12Ertd553e ENSMUSG00000020589 ENSMUST00000069066,ENSMUST00000069005 3 2 2 81 12 12376701 12376719 TGAAAGGCTGCATAAAGGT 59 12376764 12379564 TTTGTGGTGAACCTGAGAG 59 NA Mus musculus 50 Slc7a15 ENSMUSG00000020600 ENSMUST00000036938,ENSMUST00000095863 2 2 3 116 12 8536374 8537011 ACACTTACAAGGTTCCCAC 59 8536276 8536296 CGAACAGGAAGATGTATAGGA 58 NA Mus musculus 50 Rnf144a ENSMUSG00000020642 ENSMUST00000020971,ENSMUST00000062149 1 2 2 80 12 27012413 27012431 AGAAACTGCAATTAGCTGC 58 27012187 27012370 GCAACCATACACTCAATCTC 58 NA Mus musculus 50 Map3k3 ENSMUSG00000020700 ENSMUST00000002044 1 1 1 84 11 106010980 106011594 AACCAAATCTCCTAGTGCT 58 106011642 106011660 ATAGCACAAGTAGACCCTG 58 NA Mus musculus 50 Ddx5 ENSMUSG00000020719 ENSMUST00000021062,ENSMUST00000106778 3 2 3 173 11 106645821 106646194 AGCTTATTCGTCTGATGGA 58 106645415 106645434 CATTTAGAACCCAGTCACGT 59 NA DesignNoJunction Mus musculus 50 Gga3 ENSMUSG00000020740 ENSMUST00000019135,ENSMUST00000106508 3 2 2 80 11 115453793 115453813 GGAGACTTCATAATGAAGTGG 58 115453055 115453751 TGTCTCCCAAGTACTTTGG 58 NA Mus musculus 50 Sec14l1 ENSMUSG00000020823 ENSMUST00000090433,ENSMUST00000021177,ENSMUST00000103026 1 3 3 91 11 116978559 117002742 TTATGGCTGCCTATGAGAG 58 117002797 117002815 ATCCTCACTCTTGAACTCG 58 NA Mus musculus 50 Map3k14 ENSMUSG00000020941 ENSMUST00000021324 2 1 2 95 11 103103495 103103513 CTAAACGACGTGATCACCA 59 103102410 103103437 GCTATTCTCACATTCAGCCT 59 NA Mus musculus 50 Gtpbp4 ENSMUSG00000021149 ENSMUST00000021574 2 1 1 80 13 8986557 8987018 CTCTGTTTATCAACAAGCCTC 58 8986497 8986518 GATCTTCTTCAGAAAGTTCAGC 59 NA Mus musculus 50 Wrnip1 ENSMUSG00000021400 ENSMUST00000021832 1 1 1 86 13 32908281 32908299 TCGAGTTCTGATCACTGAG 58 32908349 32912103 TTGTAGTGCTCTTCTCCTG 58 NA Mus musculus 50 Ap3b1 ENSMUSG00000021686 ENSMUST00000022196 2 1 1 80 13 95263681 95271878 CTAGATCTGGACGACTTTAACC 59 95271918 95271937 ATCAGCTATCAAGCTTGGAG 59 NA Mus musculus 50 Ap3m1 ENSMUSG00000021824 ENSMUST00000022371 1 1 1 94 14 21860234 21860252 GAGCAGGAGTGAAGTACAC 59 21859343 21860177 TGCAAAGACTGTAGATCCTG 59 NA Mus musculus 50 Eaf1 ENSMUSG00000021890 ENSMUST00000022446 3 1 1 198 14 32313431 32315455 CAAGAAGACAAGAGCTGAG 57 32315617 32315635 TTTGATGTCATCCAACTGG 57 NA Mus musculus 50 Pspc1 ENSMUSG00000021938 ENSMUST00000022507 2 1 1 80 14 57380719 57380737 AAAGAGAAACTGGAGGCAG 59 57377538 57380676 ACGTCTCATTAGATCTTGCC 59 NA Mus musculus 50 Lats2 ENSMUSG00000021959 ENSMUST00000022531 3 1 3 82 14 58313202 58313222 GTGATTCTCTTTGAGATGCTG 59 58310597 58313158 CAGTTGATCACCTTCAGCT 59 NA Mus musculus 50 Golph3 ENSMUSG00000022200 ENSMUST00000059680 3 1 1 86 15 12269503 12272799 TTAACCAGAAAGGTGATCTG 57 12272848 12272866 CTGAGTCTCCTTAACATGC 57 NA Mus musculus 50 Ngdn ENSMUSG00000022204 ENSMUST00000022815 3 1 1 101 14 55640957 55640975 GAAGGAGCAGTACTCAGAC 59 55641039 55641901 TCTTCATAGTTGACCCTGTG 59 NA Mus musculus 50 Dhrs2 ENSMUSG00000022209 ENSMUST00000022820 2 1 1 83 14 55856156 55857589 AGATCTGGGACAAGATCCT 59 55857636 55857654 TTCTGTTCTCCATGTAGGG 58 NA Mus musculus 50 Pop1 ENSMUSG00000022325 ENSMUST00000052290,ENSMUST00000079028 2 2 2 80 15 34439762 34440095 GGATTATAGTCAGTGACTTGAC 58 34440136 34440154 CTGAGGTCAGGATACAGTG 58 NA Mus musculus 50 Ttll1 ENSMUSG00000022442 ENSMUST00000109481,ENSMUST00000016897,ENSMUST00000109480,ENSMUST00000109479 2 4 4 95 15 83328648 83328666 ATAATCCGTTGCTCATCGG 59 83327848 83328590 CAAGCTTGTACATGTAGCAG 58 NA Mus musculus 50 ENSMUSG00000022591 ENSMUSG00000022591 ENSMUST00000023262 2 1 1 60 1 82230778 82230796 ACATCCACCTTGTCATGAC 59 82230817 82230838 GAACTAGTTTCTTGGTAGTGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tnk2 ENSMUSG00000022791 ENSMUST00000115125,ENSMUST00000115124,ENSMUST00000115123,ENSMUST00000023480,ENSMUST00000115122,ENSMUST00000115121 3 6 6 80 16 32669612 32670043 TACCCATGAAGATGGTGAC 58 32670087 32670105 AGAGGAAATGACCTTGGTG 59 NA Nonspecific Mus musculus 50 Adipoq ENSMUSG00000022878 ENSMUST00000023593 2 1 1 172 16 23155365 23155383 CAACTGAAGAGCTAGCTCC 59 23155518 23157163 CTTAGGACCAAGAAGACCTG 59 NA Mus musculus 50 Bsg ENSMUSG00000023175 ENSMUST00000067036,ENSMUST00000105381 3 2 2 89 10 79172562 79172810 ACGAAGTACATAGTGGACG 58 79172863 79172881 CACATTGATCTCGCTTCTG 58 NA Mus musculus 50 Slc29a1 ENSMUSG00000023942 ENSMUST00000051574,ENSMUST00000064889,ENSMUST00000097317 3 3 3 80 17 45726204 45726222 TACTTCATCACAGCCTGTG 59 45726009 45726160 ATGGCGATAGAATTCCGTC 59 NA Mus musculus 50 Gabbr1 ENSMUSG00000024462 ENSMUST00000025338,ENSMUST00000113650 2 2 2 90 17 37191131 37191149 TCAAGATCATCCTCATGCC 59 37191201 37191692 CCATATGAGAGCACAATAAGG 58 NA Mus musculus 50 Pcyox1l ENSMUSG00000024579 ENSMUST00000025472 2 1 1 97 18 61859145 61861857 TTCATGAGGATCTACAAGTACC 59 61859069 61859087 GTCATGTTGACAAAGGTGG 58 NA Mus musculus 50 Nedd4l ENSMUSG00000024589 ENSMUST00000025485,ENSMUST00000080418,ENSMUST00000091871 1 3 3 80 18 65351149 65352740 AGAAGCCTGCTGATATTCC 59 65352784 65352802 TGATCCTCCGATAGGACTC 59 NA Mus musculus 50 Rab3il1 ENSMUSG00000024663 ENSMUST00000113161,ENSMUST00000025565 3 2 2 85 19 10104961 10106850 AACAACACCAACACATGTG 59 10106898 10106917 TAATAGTGGCTGTCAGAGTC 58 NA Mus musculus 50 Cd6 ENSMUSG00000024670 ENSMUST00000080292,ENSMUST00000039043,ENSMUST00000025572,ENSMUST00000113053 1 4 4 81 19 10869183 10870823 CACGATAGAATCTTCTGTGC 58 10869121 10869141 CAGGACAATACAGAGAATGAG 57 NA Mus musculus 50 Ehbp1l1 ENSMUSG00000024937 ENSMUST00000049295 2 1 1 84 19 5721496 5721514 TTTGCTGAGAGTGATGAGG 59 5720866 5721448 CTCGAGACAGATCTGACTG 58 NA Mus musculus 50 3110040N11Rik ENSMUSG00000025102 ENSMUST00000026092 3 1 1 88 7 88933392 88933410 TAGCAACTGACCCTAAAGG 58 88931077 88933340 CTCAGTGCTCAGATCTGTC 59 NA Mus musculus 50 Chuk ENSMUSG00000025199 ENSMUST00000026217,ENSMUST00000112015 1 2 2 80 19 44157077 44157095 GGAGACTTGATGGAGTCTC 58 44153465 44156443 GTACAAGTGATCAGGAGGT 58 NA Mus musculus 50 Mupcdh ENSMUSG00000025497 ENSMUST00000106021,ENSMUST00000080654 1 2 2 80 7 148460162 148460362 CATTTAATGTATCGGAGGACAC 58 148460103 148460122 TTATGTCAGCATCTGTAGCC 59 NA Mus musculus 50 Tktl2 ENSMUSG00000025519 ENSMUST00000002025 2 1 1 60 8 69036401 69036419 GAATAAGCCTACTGCCCTG 59 69036442 69036461 CTCGACATTTGGAATACCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem89 ENSMUSG00000025652 ENSMUST00000026744 3 1 1 65 9 108817130 108817148 GATAGCTGCAAGAACAGTC 58 108817177 108817195 GTAGATGCGATTTCCTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Taf3 ENSMUSG00000025782 ENSMUST00000114909,ENSMUST00000026888 1 2 4 160 2 9839825 9842687 ACTTATGTGATCCGTGATGAG 59 9838049 9838067 CACTGCATCTCTTCTGGAG 59 NA Mus musculus 50 Uimc1 ENSMUSG00000025878 ENSMUST00000026997,ENSMUST00000099496,ENSMUST00000058181 1 3 3 80 13 55157380 55157399 AGAAGACTCTCCAGATAGCA 59 55152239 55157338 TCTTCCCTATTAGCAACCTG 58 NA Mus musculus 50 Nol5 ENSMUSG00000026020 ENSMUST00000027174 2 1 1 81 1 59760980 59760999 AGCTGCAGAGATATCTATGG 58 59761043 59761476 TTCAATTACCTGCGTACAC 57 NA Mus musculus 50 Ptp4a1 ENSMUSG00000026064 ENSMUST00000027232,ENSMUST00000076587 1 2 2 80 1 31001505 31001794 ATTCATGTTCTTGACTGGC 58 31001443 31001461 CTTCACAAGACTTAGCCAG 57 NA Nonspecific Mus musculus 50 Pdcd1 ENSMUSG00000026285 ENSMUST00000027507 1 1 1 177 1 95936697 95937298 CAAGTATGTCAGAGGCCAG 59 95935985 95936003 TCAGTGAAGACAATGGTGG 59 NA Mus musculus 50 Slco6c1 ENSMUSG00000026331 ENSMUST00000027569 2 1 1 80 1 99015164 99015183 TACCTTCTGGGTATGGTAGG 59 99001471 99015121 CTTCGCTGGTTCAATTTCG 59 NA Mus musculus 50 Kif26b ENSMUSG00000026494 ENSMUST00000027771 3 1 1 125 1 180859116 180862221 CTTCGTGAATTTGACTTGGAG 59 180862308 180862326 GATCATCATGAGATGGGCC 59 NA Mus musculus 50 Nvl ENSMUSG00000026516 ENSMUST00000027797 2 1 1 80 1 183035251 183035269 CTTACAGAGATGGATGGCT 58 183031753 183035208 AGGGTCAATGATATCTGGTC 58 NA Mus musculus 50 Ppp2r5a ENSMUSG00000026626 ENSMUST00000067976,ENSMUST00000110885 3 2 2 162 1 193178623 193178641 GTCTCCAGCTCTCATTTCC 59 193177841 193178417 GTGCTACAATAGTCTGATTCCA 59 NA Mus musculus 50 Olah ENSMUSG00000026645 ENSMUST00000027955,ENSMUST00000115087 1 2 2 80 2 3265648 3278911 ATGGCTTATTGGAAGTGCA 59 3265586 3265607 GGTAGATGTCATTTGAGAAAGG 58 NA Mus musculus 50 Nsun6 ENSMUSG00000026707 ENSMUST00000028034,ENSMUST00000074887,ENSMUST00000114715,ENSMUST00000076435,ENSMUST00000114713 3 5 5 85 2 14968828 14968846 ACTGTCAGAGTGAATACGC 59 14963920 14968780 GATTCACCAAACTGCTTCTG 59 NA Mus musculus 50 Ssna1 ENSMUSG00000026966 ENSMUST00000028342 1 1 1 80 2 25127091 25127456 ACCTCAAGATCCTGGAGAG 59 25127029 25127047 AAGCTGTGGCTTTAGTCAG 59 NA Mus musculus 50 Tcp11l1 ENSMUSG00000027175 ENSMUST00000111118,ENSMUST00000028597 2 2 2 85 2 104538739 104538758 TGTCCAGTTAAGTGAAGAGC 59 104537869 104538694 GCAAGAAAGATAACAGAGTCTC 58 NA Mus musculus 50 Rtf1 ENSMUSG00000027304 ENSMUST00000028767 3 1 2 80 2 119554182 119554201 CAGCTAAATGAGCTAGAGGA 58 119554243 119554424 GTTGATGTAGCTGATAGCAG 58 NA Mus musculus 50 Adam33 ENSMUSG00000027318 ENSMUST00000110229 1 1 4 80 2 130884115 130884406 GAAGAAGCAGGAATTCTTAGG 58 130884055 130884073 GTCACCATTGGATTTGACC 58 NA Mus musculus 50 2010106G01Rik ENSMUSG00000027366 ENSMUST00000028844,ENSMUST00000110397 3 2 2 91 2 126730800 126733853 CATCCACAATTGCCTATGC 59 126730727 126730745 TACCAAGTAGAGGAGAGCA 58 NA Mus musculus 50 Stard7 ENSMUSG00000027367 ENSMUST00000110375,ENSMUST00000028845,ENSMUST00000110374 1 3 4 233 2 127096616 127109851 GGTCCATTAATGAGATGAAACG 59 127110272 127110291 TCACATCTGTGTATGTTCCA 58 NA DesignNoJunction Mus musculus 50 Rrbp1 ENSMUSG00000027422 ENSMUST00000110035 1 1 5 72 2 143814177 143814261 GGACCCAGAACAGAAAGAC 59 143814123 143814141 TTCACCTGGTTTGAGACAC 59 NA DesignRelaxed Mus musculus 50 Mmp24 ENSMUSG00000027612 ENSMUST00000029141 3 1 1 84 2 155636211 155637959 TTTGTGTTCAAGGATCGCT 59 155638007 155638025 TCCAGAACTGTTCGATCTG 59 NA Mus musculus 50 Ccnl1 ENSMUSG00000027829 ENSMUST00000029416,ENSMUST00000029415 1 2 2 95 3 65760872 65761430 GTTTCGAGATTGTTGCTATGG 59 65760797 65760818 GGTGGTGGAATACATTAATCAC 59 NA Mus musculus 50 Sec22b ENSMUSG00000027879 ENSMUST00000029476 2 1 1 83 3 97716593 97716611 TCGGAATTTGATGAACAGC 58 97716655 97718436 CTGAATGAAGGTATCAAACTCG 59 NA Mus musculus 50 Polr3c ENSMUSG00000028099 ENSMUST00000029741 1 1 1 80 3 96520636 96520655 CCCGTCGGATATAACATCTC 59 96520389 96520595 TCCAATAAACTCTAGTGGGTC 58 NA Mus musculus 50 Mutyh ENSMUSG00000028687 ENSMUST00000102699,ENSMUST00000030449 3 2 3 154 4 116488609 116488630 CAGTGATCGACTATTATACTCG 57 116489103 116489196 CTCTACCACCTTCCTAGCT 59 NA DesignRelaxed Mus musculus 50 Pex14 ENSMUSG00000028975 ENSMUST00000103217 1 1 1 81 4 148335893 148337558 TTGAATCGGAGACAGTTCC 59 148335830 148335848 AGGGTGATGAAGACTTCAC 58 NA Mus musculus 50 Mrpl33 ENSMUSG00000029142 ENSMUST00000031024 1 1 1 63 5 31918799 31918817 CTTCAACCACAAGAGAAGC 58 31918842 31924751 CACTATTGGATCATAGTGCAG 58 NA DesignNoJunction Mus musculus 50 A230097K15Rik ENSMUSG00000029314 ENSMUST00000112887,ENSMUST00000031255,ENSMUST00000092990 3 3 3 82 5 101314051 101314948 CATCCATTACCATAACAAGCAG 59 101314990 101315009 TTAGGACATCAATGGGAGAG 58 NA Mus musculus 50 Cit ENSMUSG00000029516 ENSMUST00000112014,ENSMUST00000051704,ENSMUST00000112011,ENSMUST00000112008,ENSMUST00000102560,ENSMUST00000112006 1 6 6 80 5 116445418 116445436 GGATTCTTACGGAAGACGT 59 116445480 116447516 TAAGGTTCTCTGTAGGCGA 59 NA Mus musculus 50 Hnf1a ENSMUSG00000029556 ENSMUST00000031535 3 1 1 166 5 115405499 115405841 GTGGAGGAGTGTAATAGGG 58 115405351 115405369 CCGTTATAGGTGTCCATGG 59 NA DesignNoJunction Mus musculus 50 Pcolce ENSMUSG00000029718 ENSMUST00000031731 2 1 1 210 5 138050177 138050195 AAGGATGACAACTGACGAG 59 138048764 138049192 CATGATCACCTGGTTTGAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Cml4 ENSMUSG00000030004 ENSMUST00000032073 3 1 1 82 6 85780611 85780629 ATGTTGTCCTTGTGACTGG 59 85780547 85780565 GGATTCACCTGTCTTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gcs1 ENSMUSG00000030036 ENSMUST00000032114 1 1 1 86 6 83066745 83066763 AGTGAACTTGGTGACTTCC 59 83066813 83066983 GAAGACATTGTAGCTGCCA 59 NA Mus musculus 50 Wnt7a ENSMUSG00000030093 ENSMUST00000032180 2 1 1 266 6 91344637 91344655 CACCTATGCGATTATCGCT 59 91316309 91344407 TTCTCCTCCAGGATCTTCC 59 NA DesignRelaxed Mus musculus 50 Ccdc91 ENSMUSG00000030301 ENSMUST00000032441 3 1 3 81 6 147538932 147538950 GGACACTGAGAAGGAACTG 59 147538995 147539102 TTCCAGTGATTCCTTCTGC 59 NA Mus musculus 50 Csrp3 ENSMUSG00000030470 ENSMUST00000032658 1 1 1 138 7 56089126 56089144 GTATACGCTGCTGAGAAGG 59 56086068 56087944 CATAGCAAACTTTGCAGTAGAG 59 NA Mus musculus 50 Lass3 ENSMUSG00000030510 ENSMUST00000066475 2 1 1 80 7 73918576 73924440 AGCAAACCATCACATACTG 57 73924484 73924502 CCTAAGCCATCTTTCAACC 58 NA Mus musculus 50 Tyrobp ENSMUSG00000030579 ENSMUST00000032800 3 1 1 146 7 31199576 31199594 ATTGTTCTGGGTGACTTGG 59 31200685 31202371 CTGAAGCTCCTGATAAGGC 59 NA Mus musculus 50 Sipa1l3 ENSMUSG00000030583 ENSMUST00000085811,ENSMUST00000085809 3 2 2 97 7 30162585 30162603 AAATCTTCTATGGCCGAGG 59 30156250 30162524 GGTCATCACCTTTAGCCTC 59 NA Mus musculus 50 1110006G06Rik ENSMUSG00000030590 ENSMUST00000032811 3 1 1 104 7 29937857 29938350 AATCAACAAGGTGCTTATGG 58 29937772 29937790 CTTCCTCCATCTTCTCGTC 59 NA Mus musculus 50 Zkscan2 ENSMUSG00000030757 ENSMUST00000042470 3 1 1 81 7 130638871 130642114 CATTACCTAAGAATGCTCACTC 58 130638811 130638829 GTTGTCACTTCCTCATCGA 59 NA Mus musculus 50 Dkkl1 ENSMUSG00000030792 ENSMUST00000033057 3 1 1 125 7 52465704 52465722 CAGCCACCTACAGATAGAC 58 52463255 52465487 TCTACTTTGGGAACCTTCC 58 NA Mus musculus 50 Abcc6 ENSMUSG00000030834 ENSMUST00000002850 2 1 1 81 7 53232660 53232678 TGGTTTACACAGTGTACCG 59 53232298 53232616 CATCCATGACTAGGACTCTG 58 NA Mus musculus 50 Mcf2 ENSMUSG00000031139 ENSMUST00000063507,ENSMUST00000033478,ENSMUST00000101531 2 3 3 82 X 57386931 57388571 GATCATCTTCAGAAATGCCA 57 57386868 57386887 ATTCTGTTCCAAAGGATTGC 58 NA Mus musculus 50 Itm2a ENSMUSG00000031239 ENSMUST00000033591 3 1 1 82 X 104594486 104594504 CATCATTGATGTGCCTGTG 59 104594208 104594440 AAGCAGTCATTCCCTTCTC 59 NA Mus musculus 50 Plxnb3 ENSMUSG00000031385 ENSMUST00000002079 1 1 1 80 X 71009782 71009800 GTGCGAAATGCTGTAACTG 59 71009844 71010615 ACATACAATCCGAGCAGAG 59 NA Mus musculus 50 Spata4 ENSMUSG00000031518 ENSMUST00000033917 2 1 1 84 8 55687209 55687228 GGACCTTCGATTATCATCCT 58 55687273 55687673 CGCTAGAAACTTCTCTATCTG 57 NA Mus musculus 50 Rwdd4a ENSMUSG00000031568 ENSMUST00000033973 3 1 1 94 8 48622705 48628058 CAATATAGGATAGGTGAAGACG 57 48628113 48628131 ATAGATATGACCGGAGCTG 57 NA Mus musculus 50 Sh3rf1 ENSMUSG00000031642 ENSMUST00000093488,ENSMUST00000110291,ENSMUST00000034060 3 3 3 136 8 63808265 63808283 GACAAAGATTGCCTTCCCT 59 63808811 63828210 GCAGCTGAGTTAAACTCCA 59 NA Mus musculus 50 Ces5 ENSMUSG00000031886 ENSMUST00000034355,ENSMUST00000109410 3 2 2 82 8 107453845 107454573 TGGTTCACAGAATAGTGGC 59 107454619 107454637 ATTCTTGCCTCTTAGGCAG 59 NA Mus musculus 50 Tmed6 ENSMUSG00000031919 ENSMUST00000034393 2 1 1 80 8 109587714 109587981 AGAAACAGGCTTCTATCAGC 59 109587653 109587672 ACTCCGAAGTTGAGATACAC 59 NA Mus musculus 50 Wwp2 ENSMUSG00000031930 ENSMUST00000034407 3 1 1 81 8 109981482 109981790 CATCGTTCTGAATGTCACAG 58 109981834 109981852 GCCCAGTAGTTCATTCCTC 59 NA Mus musculus 50 Kirrel3 ENSMUSG00000032036 ENSMUST00000077837,ENSMUST00000115148,ENSMUST00000115143,ENSMUST00000045091 1 4 5 97 9 34719438 34746709 TGAATGAAGGTCAAGTCTACTC 59 34746767 34746785 ATATTCAGGGATGGCACAC 59 NA Mus musculus 50 Trappc4 ENSMUSG00000032112 ENSMUST00000034623 3 1 1 107 9 44213401 44213419 ATTGGTTCCCAGCTATCTC 58 44212530 44213330 CACAAACTTGATCCCTGTC 58 NA Mus musculus 50 Rab27a ENSMUSG00000032202 ENSMUST00000034722 2 1 1 80 9 72932830 72934890 GAAACTGGATAAGCCAGCT 59 72934933 72934952 CCAGGTCACTCTTATTTCCA 59 NA Mus musculus 50 Myo1e ENSMUSG00000032220 ENSMUST00000034745 2 1 1 80 9 70170320 70172649 TATTCTACCAGCTCATTGAGG 58 70172687 70172709 GGTAGTAATAGTAGTCCATGCTG 59 NA Mus musculus 50 Topbp1 ENSMUSG00000032555 ENSMUST00000035164 3 1 1 81 9 103226758 103226777 GATTTCCTTCAGTCAGTGTG 58 103226821 103227981 TTCTTGAACACTTGCTCCA 59 NA Mus musculus 50 Pik3r4 ENSMUSG00000032571 ENSMUST00000065778 3 1 1 80 9 105563743 105563763 CAGTACTGCTGATGTCTACTG 59 105563802 105565382 TTCCTCTCAATCTGTATCACTG 59 NA Mus musculus 50 Cntnap3 ENSMUSG00000033063 ENSMUST00000091554 3 1 1 80 13 64848087 64848106 TAGCAGATGGTCACTTTCAC 59 64847086 64848047 TCTTTGTACTCTGGTTAACCTC 59 NA Mus musculus 50 Ctdspl2 ENSMUSG00000033411 ENSMUST00000065405 3 1 7 146 2 121814624 121819087 TGGTCTTAGATCTGGATGAG 57 121819193 121819214 CACTCAGAATGTTACCTAATGG 58 NA Mus musculus 50 Spata2L ENSMUSG00000033594 ENSMUST00000098327 2 1 2 199 8 125759589 125759607 TCTGGTGGAAGACTTTGAC 59 125758136 125759428 CTGAGAAGGTCTTGATAGTGG 59 NA Mus musculus 50 Zswim5 ENSMUSG00000033948 ENSMUST00000044823 3 1 1 80 4 116638312 116638331 ATGGAAACTATGGGCATGAG 59 116638374 116645487 TGGATAAAGAGTCTGGGCT 59 NA Mus musculus 50 Arhgap27 ENSMUSG00000034255 ENSMUST00000107024,ENSMUST00000041385 3 2 4 89 11 103199702 103200011 AGAGACTTCGGAAGAAACAC 59 103199632 103199650 CAGCTGAGGTCTTTGAGTC 59 NA Mus musculus 50 Morc2a ENSMUSG00000034543 ENSMUST00000093389,ENSMUST00000096441 2 2 2 80 11 3572367 3575841 GCATTGATGAAGTAATTGTCCC 59 3575880 3575900 CAAACTTCTCCACATTGTCTG 59 NA Mus musculus 50 Mast4 ENSMUSG00000034751 ENSMUST00000091273,ENSMUST00000099202 3 2 2 81 13 103579092 103579111 TTTATCAAGCAACTAGTCCG 57 103577517 103579049 CAGGATCAAATTCCAAACAC 57 NA Mus musculus 50 Ankrd27 ENSMUSG00000034867 ENSMUST00000040844,ENSMUST00000085536,ENSMUST00000085538 3 3 3 80 7 36387536 36387555 AAGAACATTGCCTCTTTCCA 59 36387596 36388588 AGCATTTACGGAGTCTATGTG 59 NA Mus musculus 50 B830045N13Rik ENSMUSG00000035131 ENSMUST00000074622 1 1 2 80 1 148678846 148678864 GTACACAAGCTCTTTAGCC 58 148678907 148748143 GTAGGTTGATGTTCTCTGTC 57 NA Mus musculus 50 Tanc1 ENSMUSG00000035168 ENSMUST00000112568,ENSMUST00000037526,ENSMUST00000100082 2 3 4 60 2 59681619 59681638 AAAGATGTCAAGTTCCACCA 59 59681661 59681679 CTTGAATCCGTCTGAAACG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cox18 ENSMUSG00000035505 ENSMUST00000048363 3 1 1 114 5 90648050 90648394 CATTCAGACGGCATTTCTG 59 90647954 90647972 TGACAACACCAACAGAGAC 59 NA Mus musculus 50 Prdm4 ENSMUSG00000035529 ENSMUST00000037646 2 1 1 83 10 85363893 85364458 CAACAGATAGGTGTTCCTG 57 85363828 85363847 AGCTTTGAACTCTGAATAGG 57 NA Mus musculus 50 Leng4 ENSMUSG00000035596 ENSMUST00000038608 2 1 1 98 7 3643531 3643654 TTTAAGAAAGCTGGACCTGG 59 3643452 3643470 CAGAGAATGCAAACTGTGG 59 NA Mus musculus 50 Ndufa3 ENSMUSG00000035674 ENSMUST00000039415 3 1 2 60 7 3569436 3569455 CACATTCAACTCAGTTTGAC 57 3569477 3569496 TTTGCATAAGTCAGACTTCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Arl5a ENSMUSG00000036093 ENSMUST00000036541 1 1 1 191 2 52267585 52267603 CTACAAGATGCTAGCCCAC 59 52257935 52260426 TCAAGTCCTTGGCATAACC 59 NA DesignNoJunction Mus musculus 50 Ng23 ENSMUSG00000036185 ENSMUST00000040151 1 1 1 95 17 35163703 35163721 TGGACTTGCATTCAGAGAC 59 35163390 35163644 GCTTTGACAACTCCTTGTG 59 NA Mus musculus 50 Grifin ENSMUSG00000036586 ENSMUST00000042993 3 1 1 126 5 141040484 141040502 ACGTCAAACCTCGATTCTC 59 141039651 141040394 CTCACCTCCATCTCAAAGG 59 NA Mus musculus 50 Zfp39 ENSMUSG00000037001 ENSMUST00000102703 3 1 2 80 11 58706511 58706529 TCTTTAAGCTGGAGCAAGG 59 58705034 58706470 TTATCTTCTGTACATCTGCTCG 59 NA Nonspecific Mus musculus 50 Foxa2 ENSMUSG00000037025 ENSMUST00000109964,ENSMUST00000047315,ENSMUST00000109963 1 3 3 76 2 147870488 147870506 ACATACATGAGCATGTCCG 59 147870430 147870448 GATGACATGTTCATGGAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Trmt12 ENSMUSG00000037085 ENSMUST00000036937 1 1 1 60 15 58705171 58705189 AAGCTCTCAGACATTGCAG 59 58705213 58705231 AGCCTTCTTTAGAACTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Aff3 ENSMUSG00000037138 ENSMUST00000039827 1 1 1 80 1 38595821 38595841 AAGATATCCTAAGCCAGAGGA 59 38593781 38595779 GTTCATAGACACTCCTGCA 58 NA Mus musculus 50 Lrrc20 ENSMUSG00000037151 ENSMUST00000049242 1 1 1 84 10 61010888 61010906 TTTCAAGACTTCCCAGAGC 59 61010954 61042886 CCGGAACATCCACTATCTC 59 NA Mus musculus 50 2310007F21Rik ENSMUSG00000037257 ENSMUST00000041551 2 1 1 102 9 63465317 63465335 ATAAACCGACAACAGGCTC 59 63465401 63466969 ATTCAGGGAAGTCATCGTC 59 NA Mus musculus 50 Dtl ENSMUSG00000037474 ENSMUST00000027933,ENSMUST00000046398 1 2 2 80 1 193380416 193380672 CGAAAGCTAGGATACTCGA 58 193380354 193380373 ATAGATGTTGTCATCTGTGC 57 NA Nonspecific Mus musculus 50 Mynn ENSMUSG00000037730 ENSMUST00000047502,ENSMUST00000047495 2 2 2 85 3 30512547 30515478 AAAGGTCCATTCTGGTACTG 59 30515526 30515544 GACTTCTCTGTACGGAGTC 58 NA Mus musculus 50 2010209O12Rik ENSMUSG00000038181 ENSMUST00000063346 3 1 2 125 5 24095042 24097114 TTACTCTACTTCACAGAGCAG 58 24097201 24097219 CAAGTCGAGGGTGTATTCC 59 NA Mus musculus 50 Hoxa9 ENSMUSG00000038227 ENSMUST00000048680,ENSMUST00000114425 2 2 2 107 6 52174476 52175539 CCCATCGATCCCAATAACC 59 52174387 52174405 AAACTCCTTCTCCAGTTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hrc ENSMUSG00000038239 ENSMUST00000085351,ENSMUST00000041981 1 2 2 80 7 52593259 52593277 ATGTACCGAATGTGAAAGC 58 52593321 52593537 CAGAATTGACAGTGCTGAC 58 NA Mus musculus 50 Rgs4 ENSMUSG00000038530 ENSMUST00000027991 1 1 1 96 1 171674641 171674816 TCACCATGAATGTGGACTG 59 171674563 171674581 CTTGTACTCCTCACAGCTG 59 NA Mus musculus 50 Cbfa2t2 ENSMUSG00000038533 ENSMUST00000109725,ENSMUST00000045270,ENSMUST00000109720,ENSMUST00000099178,ENSMUST00000109724,ENSMUST00000109718 2 6 7 239 2 154336319 154341556 ATTCCATTTCTCAAGGCCA 59 154343468 154343487 TTCAGGAGGAACTGTATCTC 58 NA DesignRelaxed Mus musculus 50 1110054O05Rik ENSMUSG00000038544 ENSMUST00000095063 3 1 3 68 4 59788421 59795143 CAAATCCTTCAGGACAAGG 58 59788371 59788389 TCTCTTTGTCCAGTTCAGC 59 NA DesignNoJunction Mus musculus 50 Mybpc2 ENSMUSG00000038670 ENSMUST00000064089 3 1 1 80 7 51764956 51764974 CTCAGTTGGAGAAGACTGG 59 51764518 51764912 ATCAAGTACCCAGTCACTG 58 NA Mus musculus 50 Drd5 ENSMUSG00000039358 ENSMUST00000041646 2 1 1 60 5 38711916 38711934 ATATTCGTCTGGTTTGGCT 58 38711955 38711976 CATTAAAGGCATAGATGATGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cdh6 ENSMUSG00000039385 ENSMUST00000036439 3 1 1 80 15 12964442 12970729 CATCGTGATCCTACTAGTGAC 59 12964382 12964401 TTGGAAATGATCAAAGGCTC 58 NA Mus musculus 50 Slc7a12 ENSMUSG00000039710 ENSMUST00000037321 1 1 1 81 3 14499401 14505353 ACCTTATAAGGTGTGGCTG 58 14505398 14505416 AGACTGAATCACTGGTGTG 59 NA Mus musculus 50 Orai2 ENSMUSG00000039747 ENSMUST00000041048 1 1 1 197 5 136637495 136637513 CATGGATTACCGAGACTGG 59 136626782 136626800 TACTGGTACTTGGTCTCCA 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Mrap ENSMUSG00000039956 ENSMUST00000038197 3 1 1 137 16 90738911 90747783 AAGCATTCCATTGTCATCG 58 90749491 90749509 CCATGAACATATTGGCTGG 58 NA DesignNoJunction Mus musculus 50 Elavl1 ENSMUSG00000040028 ENSMUST00000116496,ENSMUST00000098950 1 2 2 93 8 4304991 4305009 TTGTGAACTATGTGACTGC 57 4301828 4304935 GCATATGACACCTTAATGGT 57 NA Mus musculus 50 Cdk6 ENSMUSG00000040274 ENSMUST00000042410 2 1 1 82 5 3519479 3520650 CAAAGACCTACTTCTGAAATGC 59 3520693 3520711 GGAAGTACGGGTGATTCAG 59 NA Mus musculus 50 Rabggta ENSMUSG00000040472 ENSMUST00000062861 3 1 1 80 14 56337579 56337709 AGAATAAATGGTGCCTGCT 59 56337517 56337536 ACTCCAGTGTTTCTTTCTCG 59 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000075269,ENSMUST00000111372,ENSMUST00000111371,ENSMUST00000111370,ENSMUST00000099723,ENSMUST00000111376,ENSMUST00000111369,ENSMUST00000111375,ENSMUST00000111373,ENSMUST00000077941,ENSMUST00000066473,ENSMUST00000111383,ENSMUST00000111381,ENSMUST0 3 17 17 85 2 91003061 91003664 CAACTCTAGCGAGAACCAG 59 91002994 91003012 TCTTCATATTGAGCCAGCC 59 NA Mus musculus 50 Wdr43 ENSMUSG00000041057 ENSMUST00000047086 3 1 1 88 17 71981470 71982970 ACTTAATGTCTGGCAGGTC 59 71983022 71983040 AGTCAACATAGACAGGCTC 58 NA Mus musculus 50 Tcf20 ENSMUSG00000041852 ENSMUST00000066843,ENSMUST00000048966 3 2 3 78 15 82646082 82655670 ATTGACGCAGATTGTTTGC 59 82640199 82640217 CTCATCTCCACAGTCTCAC 59 NA DesignRelaxed Mus musculus 50 Elmod1 ENSMUSG00000041986 ENSMUST00000048409 2 1 1 97 9 53779330 53779350 GTTACAGAAACCTCATTGCAG 59 53773898 53779271 CTCCCATAGCTTCAGAAGC 59 NA Mus musculus 50 Atxn2 ENSMUSG00000042605 ENSMUST00000051950,ENSMUST00000111762,ENSMUST00000111761 1 3 3 80 5 122197938 122197957 CGAAATGTGAAGTACAAGTG 57 122198000 122199100 GTACCAAGTCACACTTAGG 57 NA Mus musculus 50 Hirip3 ENSMUSG00000042606 ENSMUST00000037248 3 1 1 81 7 134006430 134006690 TTCAGAGTCAGAATCCAGC 58 134006735 134006753 TGTCTTCTTGGTTGTCCTG 59 NA Mus musculus 50 Trim72 ENSMUSG00000042828 ENSMUST00000106248,ENSMUST00000081042 2 2 2 83 7 135151523 135151976 TTCCTCATGAAATTCTGCCT 59 135152619 135152637 CTGGATATCTAGCCTTGCC 59 NA Mus musculus 50 Olfr957 ENSMUSG00000042949 ENSMUST00000051653 2 1 1 60 9 39319141 39319159 ATCCTGTTCTCTTCTCACC 58 39319099 39319119 CGAAAGACAGATTACTGAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 5330401P04Rik ENSMUSG00000043015 ENSMUST00000087708 3 1 1 91 1 52697824 52697843 GTCCATATGGAGAAACTGTG 57 52697896 52698025 GAAATCCACAATGTTTCGAC 57 NA Mus musculus 50 D330038O06Rik ENSMUSG00000043090 ENSMUST00000039786,ENSMUST00000110201,ENSMUST00000098687,ENSMUST00000110197,ENSMUST00000039427 3 5 5 81 8 72290670 72291545 GGAAGAATTCAAAGGCATGTC 59 72290609 72290628 AATCGTATGGCTTGTTTCCA 59 NA Mus musculus 50 V1rg6 ENSMUSG00000043308 ENSMUST00000057229 3 1 1 60 7 12466410 12466429 TGATGTGCATATTTGTCCTC 57 12466452 12466470 TAGGTTGTCAAGATGACCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr267 ENSMUSG00000043385 ENSMUST00000059608 2 1 1 60 4 58798498 58798516 TTCTGTTTGTCTTCAGCCT 59 58798456 58798477 ATAAGAGTACAGTTACCCAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gimap5 ENSMUSG00000043505 ENSMUST00000055558 3 1 1 206 6 48700493 48702549 TAGTTCAAGGACCAGAAGC 58 48702719 48702737 CTACCACTAGGATGCTCCT 59 NA DesignRelaxed Mus musculus 50 Irf2bp1 ENSMUSG00000044030 ENSMUST00000053713 2 1 1 61 7 19590626 19590644 GGTTCTGGCAATGTTTACG 59 19590668 19590687 AGAGCATCATGAAACATCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr794 ENSMUSG00000044293 ENSMUST00000059957 3 1 1 60 10 129007949 129007970 CCTGTACAGTATATCAACTGGG 59 129007991 129008009 TATTTGACTGGCACAAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mcart6 ENSMUSG00000044348 ENSMUST00000113070,ENSMUST00000113069 2 2 3 198 X 133550832 133550850 TTTCCACAACGTGTAAGGT 59 133518151 133549804 ATGGAAGAAGCTGGTAACC 59 NA InUTR Mus musculus 50 AB041803 ENSMUSG00000044471 ENSMUST00000115107,ENSMUST00000050386 2 2 2 153 6 31131133 31147781 CTGCATCTCGTTGATTCCT 59 31116615 31116633 AGAGTCAGGTATCTGTGCA 59 NA DesignNoJunction Mus musculus 50 Gemin7 ENSMUSG00000044709 ENSMUST00000051364 3 1 1 68 7 20150703 20150721 CTTCTACGTTTCCCAACTG 58 20150653 20150671 ATGTCACTACATCGAAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Dok7 ENSMUSG00000044716 ENSMUST00000101298 3 1 4 167 5 35399574 35399592 ATGACAGAAGATGACCGAG 58 35417990 35418009 TCAAACAGGAAGCTCATCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Tlr9 ENSMUSG00000045322 ENSMUST00000062241 1 1 1 60 9 106128155 106128174 CGTAGACTTACTGTTGGAGG 59 106128197 106128215 ACACTTCACACCATTAGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hcrt ENSMUSG00000045471 ENSMUST00000107360 2 1 2 278 11 100623472 100624145 CTTCTACAAAGGTTCCCTG 57 100622516 100622534 CCCTTGTATTGGACCTCTC 59 NA DesignNoJunction Mus musculus 50 Lcn6 ENSMUSG00000045684 ENSMUST00000114199,ENSMUST00000114198,ENSMUST00000114197 3 3 4 128 2 25536319 25536456 ACACAGTGTCGTTGTACAG 59 25536548 25536779 CACAAGTGAGGTCCTTCTG 59 NA Mus musculus 50 Olfr447 ENSMUSG00000045708 ENSMUST00000055763 1 1 1 60 6 42862390 42862409 TAGTCTGAGGAACAAAGAGG 58 42862431 42862450 GGTGTCCTCCTTTAAGAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Prr15 ENSMUSG00000045725 ENSMUST00000059138 2 1 1 62 6 54279445 54279464 CTCAGGTCAGATAAGTTGTG 57 54279489 54279507 TGAGATCTTCAAATTGCGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 C230012O17Rik ENSMUSG00000046219 ENSMUST00000052917 3 1 2 60 4 24892330 24892348 GGACTTAATCCAAAGGGAC 57 24892288 24892307 GGAGCCGATAAATTACACAG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 She ENSMUSG00000046280 ENSMUST00000050401,ENSMUST00000107401 1 2 2 94 3 89653512 89653530 TACCAGAGGAGGATGATCG 59 89653588 89655541 CTCAAACTGGACTGACAGG 59 NA Mus musculus 50 NM_146648.1 ENSMUSG00000046590 ENSMUST00000050854 3 1 1 60 2 87941403 87941421 TACATGTTCTTCCCACCTG 58 87941361 87941381 GTAAAGAAGGAGAATGATCCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pkd1l1 ENSMUSG00000046634 ENSMUST00000055297 1 1 1 80 11 8775703 8775721 CGAAAGAACTCTGTTGTCC 58 8774305 8775659 GTTGGTTAGGTATGCTCAG 57 NA Mus musculus 50 Irgm ENSMUSG00000046879 ENSMUST00000049519 3 1 2 84 11 48682083 48682104 ACTCGGATCTTATCATGAAACC 59 48680462 48680480 GGAGCATAATGGGTCTCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Ccdc108 ENSMUSG00000047021 ENSMUST00000094844,ENSMUST00000057511 1 2 2 97 1 74973267 74973602 TTGGTTTCTGTAGAGGTCC 58 74973188 74973206 AATCCACAGAGTCTGTTCC 58 NA Mus musculus 50 Mipol1 ENSMUSG00000047022 ENSMUST00000056019 2 1 3 164 12 58433436 58465121 CTTTGTCTCAGTGCAAACG 59 58515329 58515348 GTTCAACTGCAGTTTCTCTG 59 NA Mus musculus 50 Dusp18 ENSMUSG00000047205 ENSMUST00000109996,ENSMUST00000055931 3 2 2 60 11 3797363 3797381 GCCTACCTCATGAAGTACC 59 3797405 3797423 ATGACTTGGTCCAAGTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 8030462N17Rik ENSMUSG00000047466 ENSMUST00000056196 2 1 2 81 18 77912956 77912977 GAGATACTTCAGGTGTCTGG 59 77912894 77912914 CAGCCATAGTAGATGTTTCAC 58 NA Mus musculus 50 Olfr616 ENSMUSG00000047544 ENSMUST00000106886 3 1 1 63 7 110713762 110713780 AAACAGTAGCTGGTTCCAG 59 110713717 110713735 CACATCTTCTAGTCCAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gm534 ENSMUSG00000049178 ENSMUST00000051102 2 1 1 61 14 49501441 49501459 AATCTGTGCAAAGATGGTC 58 49501398 49501416 TGTTTCTCTTGGAAGACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hspe1-rs1 ENSMUSG00000049246 ENSMUST00000051437 2 1 1 60 18 47271878 47271897 GTATTGGTTGAAAGGAGTGC 59 47271920 47271938 TTTCTGGAAGCATAATGCC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Prmt6 ENSMUSG00000049300 ENSMUST00000061464,ENSMUST00000106567 3 2 2 94 3 110053726 110053745 CTGTACTACGAGTGCTACTC 58 110053651 110053669 TTCTTCAGGATGCCTAAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Setd8 ENSMUSG00000049327 ENSMUST00000059580,ENSMUST00000111458 3 2 2 169 5 124900818 124900837 TTCTACCAATGTAGCAGTCG 59 124901374 124907077 TTTCTTCAGACTGCAGCTC 59 NA Nonspecific Mus musculus 50 A230107C01Rik ENSMUSG00000049676 ENSMUST00000085819,ENSMUST00000047846 1 2 3 80 7 29970604 29974838 CCACATTCAAGGTATCAGG 57 29970542 29970560 GTGTAGGAGACATCAAAGG 57 NA Mus musculus 50 F2rl3 ENSMUSG00000050147 ENSMUST00000058099 2 1 1 60 8 75286547 75286566 CTCTATGGCCACATGTATGG 59 75286589 75286607 GGTATCTGTCCAAGCTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rps19bp1 ENSMUSG00000051518 ENSMUST00000052499 2 1 1 61 15 80091809 80094415 TAGCTGAGTACCAGAAACG 58 80091766 80091786 GGTCATAAACTTCAGGTTTGC 59 NA DesignNoJunction Mus musculus 50 ENSMUSG00000051848 ENSMUSG00000051848 ENSMUST00000063399 2 1 1 63 16 11062641 11062661 TCCTGAGCTACGTAATAAGAC 58 11062598 11062616 CCTCCTTCCTTCTGTTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 D930048N14Rik ENSMUSG00000052563 ENSMUST00000064493 3 1 1 106 11 51467278 51467296 CTACCTTTACATGGCTTCG 57 51467364 51467504 GGGAAAGAACATTAGAGATGG 58 NA Mus musculus 50 Glis3 ENSMUSG00000052942 ENSMUST00000065113,ENSMUST00000112612 3 2 2 82 19 28606473 28614705 TCCTTCAGATACCAGGTCC 59 28606409 28606427 TCAAGGCTGATTGACTCTC 58 NA Mus musculus 50 Clec12a ENSMUSG00000053063 ENSMUST00000065289 1 1 1 80 6 129303838 129304498 TATAGCAAAGAACCAGAGCA 58 129304539 129304559 GAGTTGAGAATAACAGCTGTC 58 NA Mus musculus 50 Rxfp2 ENSMUSG00000053368 ENSMUST00000065745,ENSMUST00000110496 2 2 2 80 5 150862694 150866258 CAACTTCAGTCTCTAGACCT 58 150866301 150866319 AGAAAGGTTCTTCATTGGC 57 NA Mus musculus 50 Nebl ENSMUSG00000053702 ENSMUST00000037174 1 1 4 80 2 17346199 17346217 CCACCATTACAACCCTCTG 59 17335404 17346157 TTATATTCCCAATCACTGGCC 59 NA Mus musculus 50 Nebl ENSMUSG00000053702 ENSMUST00000028080,ENSMUST00000095135 2 2 4 60 2 17270487 17272339 CACATCTAAGGACCTACCG 58 17270445 17270463 GAGACCTCATCTTCATCCT 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Tmem39b ENSMUSG00000053730 ENSMUST00000066336,ENSMUST00000102588 1 2 2 111 4 129370388 129370406 CTTCTGTCAGCTCATAGCC 59 129369746 129370313 GATCAGGTGGAAGTTCAGG 59 NA Mus musculus 50 H2-T18 ENSMUSG00000054128 ENSMUST00000025312,ENSMUST00000102675,ENSMUST00000113714 3 3 5 69 17 36326570 36326588 AATCTGCAGACTATGCTGG 59 36326371 36326389 CATACATCACCTGGATGGT 58 NA DesignNoJunction Mus musculus 50 Olfr481 ENSMUSG00000054236 ENSMUST00000067143 3 1 1 60 7 115224353 115224371 TGGGACTAACAGATAGTGC 58 115224394 115224413 TAAACCGGTAGAAAGAACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Slc30a7 ENSMUSG00000054414 ENSMUST00000067485 1 1 1 81 3 115657111 115659798 CTATCAGAGGGTGCAACAG 59 115657048 115657068 CACGTAAACATCAGAACAGAG 58 NA Mus musculus 50 1500002C15Rik ENSMUSG00000054527 ENSMUST00000062214 2 1 1 60 4 155108545 155108563 AAGAAAGTGCCATCAGAGG 59 155108503 155108522 TGTAGTCATTAGTCCCTGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Emcn ENSMUSG00000054690 ENSMUST00000067877,ENSMUST00000067858,ENSMUST00000098588,ENSMUST00000106260 3 4 4 96 3 137079689 137079708 TACTCAACTACTGGATGCCT 59 137079765 137080020 ATCCTCAGTATCTTGAAGCAG 59 NA Mus musculus 50 Eef1d ENSMUSG00000055762 ENSMUST00000055220 3 1 9 175 15 75731586 75731604 CTATGAGCAGATGAACGGG 59 75731060 75731079 CAATCAGACATGCTGTTTGG 59 NA DesignNoJunction Mus musculus 50 St8sia3 ENSMUSG00000056812 ENSMUST00000025477,ENSMUST00000074935 2 2 2 90 18 64429627 64431175 CATGTCAACAGGTACTGGA 58 64431227 64431247 CACATATTGCAGATGCAAGAG 59 NA Mus musculus 50 AI842396 ENSMUSG00000057054 ENSMUST00000073625,ENSMUST00000108543,ENSMUST00000108542,ENSMUST00000108541 2 4 4 85 11 70503438 70503699 ATTCCACCAATTCTGAGGG 59 70503371 70503389 CTCCAAAGCTTCTCAGGAG 59 NA Mus musculus 50 Cyp2d12 ENSMUSG00000057138 ENSMUST00000068861 3 1 1 82 15 82387400 82387418 TTACCTCATCAGGATGCTG 58 82387461 82388103 GGAATGTGTTAATAACCTCAGG 58 NA Mus musculus 50 Lce1a1 ENSMUSG00000057609 ENSMUST00000074142 3 1 1 178 3 92451110 92452196 TGTGTACCTGGAATCTTGC 59 92450950 92450968 CAGACTACAGCAGGAAGAC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Phtf1 ENSMUSG00000058388 ENSMUST00000063717,ENSMUST00000090685,ENSMUST00000055425 2 3 3 80 3 103795265 103795285 GTCATATTGTTCGGGATTCAG 58 103795326 103797619 TACCAGATCTAGAACCCTGG 59 NA Mus musculus 50 2810428I15Rik ENSMUSG00000058833 ENSMUST00000075175 3 1 1 165 8 73028352 73028370 AGGAACTCAGGTTTGATGC 59 73028205 73028224 AATTCTTTATTGCGTGAGGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zfp708 ENSMUSG00000058883 ENSMUST00000109743 3 1 3 177 13 67198745 67198764 ATTGAAGTCTTCATCAACGC 58 67175103 67175772 TAGAGAAAGCAAGACCCAG 58 NA Mus musculus 50 Olfr913 ENSMUSG00000059189 ENSMUST00000081095 1 1 1 60 9 38402243 38402262 CTTGGTTCGTATTTCATGGG 58 38402282 38402303 GTCTTAGAATACATCCAGTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr727 ENSMUSG00000059488 ENSMUST00000079142 1 1 1 60 14 50746666 50746685 GCCGTGTATGTATCATTCTC 58 50746706 50746726 CTAGTTGTATGGATGAAACCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nsmce2 ENSMUSG00000059586 ENSMUST00000079703 2 1 1 80 15 59287007 59423255 AGCTGAAGAAGCAATATGG 57 59423298 59423317 GGGTCACAATCATATCTTCG 58 NA Mus musculus 50 Arl6ip2 ENSMUSG00000059811 ENSMUST00000112437,ENSMUST00000068282,ENSMUST00000073602 1 3 3 80 17 80259175 80259196 TTGGAGTTATCCTTATGAGCAC 59 80256576 80259136 TTCTGCTTCACCTGTAATCTC 59 NA Mus musculus 50 Ntng1 ENSMUSG00000059857 ENSMUST00000106569 1 1 6 109 3 109675173 109675191 CAAGAAGAACTACCAGGGC 59 109585821 109654695 AGACATTAGTACCGATACTGGA 59 NA Mus musculus 50 Olfr805 ENSMUSG00000060089 ENSMUST00000078876 3 1 1 63 10 129160433 129160451 GATCTTCGCCTCAAGACTC 59 129160388 129160406 ATGCCATTTCCAAGAAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nrg2 ENSMUSG00000060275 ENSMUST00000115713,ENSMUST00000115707,ENSMUST00000115705,ENSMUST00000115704 1 4 6 180 18 36205543 36205561 GAACATCCTTGGGAAGGAC 59 36192057 36197893 GTTTGGACATTTGCAGGAG 59 NA Mus musculus 50 Samd5 ENSMUSG00000060487 ENSMUST00000100070 3 1 1 63 10 9394732 9394750 CATAGTTTACGAGTGGCTG 57 9394687 9394706 ATTATCCACGAAGGACTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr671 ENSMUSG00000060856 ENSMUST00000078710 2 1 1 60 7 112123992 112124010 TTCTCCTACTGAGGCTACC 59 112123950 112123969 TGCTCACAGTAAGTATGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG622282 ENSMUSG00000060975 ENSMUST00000079069 1 1 1 75 2 104551865 104551883 CAGAAAGGGTCTTTCAAGC 58 104551922 104551940 TTACGACGAAATCTGAACG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Defcr-rs1 ENSMUSG00000061958 ENSMUST00000077452 1 1 1 170 8 22235709 22235727 GAAGACACTTGTCCTCCTC 59 22234931 22235575 GCTACATCTTGAAGAGCAG 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Rpl27a ENSMUSG00000062461 ENSMUST00000080866 1 1 1 60 13 99674361 99674379 CCACTTGAAGAGGAACCAG 59 99674403 99674421 CAATGTCCACGGTTTATCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 2310039H08Rik ENSMUSG00000062619 ENSMUST00000071430 1 1 1 60 17 46910137 46910155 GGTCCTACACAAACTTGAG 57 46910178 46910197 TTACTAGGCAACATTGAGTC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 BC050092 ENSMUSG00000062794 ENSMUST00000086281 2 1 1 132 9 22062589 22062607 ATCATTTGAAGACGTAGCC 57 22058378 22062493 GTTCATACAGTGCCCTAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Olfr777 ENSMUSG00000062914 ENSMUST00000080313 1 1 1 60 10 128705591 128705609 ATCAAACCATCAGCAAAGG 58 128705549 128705567 AAGTGGTGAGAACCATCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr134 ENSMUSG00000064153 ENSMUST00000074883 3 1 1 60 17 38312838 38312856 CAACCTAAGTTCATGGCTC 58 38312879 38312898 AGATGAAAGGGTTCAGTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-30d ENSMUSG00000065437 ENSMUST00000083503 2 1 1 61 15 68172829 68172848 TCTGTGTCTGTAAACATCCC 59 68172787 68172805 CATCTGACTGAAAGCTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-181b-1 ENSMUSG00000065458 ENSMUST00000083524 1 1 1 60 1 139863226 139863244 CAACATTCATTGCTGTCGG 59 139863267 139863286 TGCATTCATTGTTCAGTGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-99a ENSMUSG00000065530 ENSMUST00000083596 2 1 1 64 16 77599181 77599199 CATAAACCCGTAGATCCGA 58 77599227 77599245 CACAGACCCATAGAAACGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Il11ra2 ENSMUSG00000066201 ENSMUST00000084667 3 1 1 80 4 42670993 42671011 AGTAGTAGCTCAGGAGGAC 59 42670834 42670949 GGATCCCTGTGATCAAGTG 59 NA Nonspecific Mus musculus 50 Rpl21 ENSMUSG00000066443 ENSMUST00000085262 1 1 1 60 9 88285858 88285877 GGAAGAGTCTACAATGTCAC 57 88285900 88285918 CCTTAACCTGCTTGTTGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Olfr834 ENSMUSG00000066910 ENSMUST00000086492 3 1 1 60 9 18793204 18793223 TGTTTATTTGAGCTCTGCTG 58 18793245 18793264 CATCACAGAGGCTATAGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000020946 ENSMUSG00000067773 ENSMUST00000088463 1 1 2 68 1 18241398 18255109 CAGCCAGAAGTCATATTGAC 58 18241349 18241367 TCTTACACATTCCTCGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Macrod2 ENSMUSG00000068205 ENSMUST00000110064,ENSMUST00000078027,ENSMUST00000110058,ENSMUST00000110059 1 4 10 80 2 142035867 142043319 GAAAGAAGATTCAGAAGGGC 58 142043361 142043380 GAACTTTCTGGTTTCTTTGC 57 NA Mus musculus 50 EG434179 ENSMUSG00000069727 ENSMUST00000107992,ENSMUST00000073544 1 2 2 89 7 49918361 49920140 GAAGATATGGAAGGCACGA 59 49918290 49918311 GATGACTGTGATATTTGAAGGC 59 NA Nonspecific Mus musculus 50 Olfr406 ENSMUSG00000070375 ENSMUST00000079051 1 1 1 60 11 74082959 74082977 CAGCAACACATTCTCTTCC 58 74083001 74083019 GATTCCCTGCTACAGTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 NM_001111273.1 ENSMUSG00000070572 ENSMUST00000094454 1 1 1 77 4 148831793 148831811 ATGATGAGGAGACTGAGAC 57 148831852 148831870 GACCGTACAACAGAAACAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Olfr1340 ENSMUSG00000070821 ENSMUST00000094834 3 1 1 60 4 118399482 118399501 TTCTGATCCCATTATCCCTC 58 118399521 118399542 CTTAGAATGGCTATGAAGATCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zscan4f ENSMUSG00000070828 ENSMUST00000091440 1 1 1 80 7 11984406 11984424 CAGTGGTAGCGATATGAGG 59 11984467 11986322 ATTGAAACATGGACCATGAC 58 NA Nonspecific Mus musculus 50 Ttc28 ENSMUSG00000072734 ENSMUST00000100894 3 1 1 85 5 111718515 111718534 TAGAGGATCCTAGAGACGTC 58 111718582 111718600 AGAGTGAATGCCAAGTAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sod3 ENSMUSG00000072941 ENSMUST00000101208 2 1 1 60 5 52759326 52759345 GACCTGGTTGAGAAGATAGG 59 52759368 52759386 CTAGCTCCATCCAGATCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Armcx5 ENSMUSG00000072969 ENSMUST00000096321 1 1 1 106 X 132278144 132279046 AATGTGATAGGTTTGCCAG 57 132279459 132279477 ATCTGTCACTGAAGTTGGA 58 NA InUTR Mus musculus 50 Nxph1 ENSMUSG00000073272 ENSMUST00000101672 2 1 1 86 6 8900271 8900289 GTACGTTCTTCTCCTCCTG 59 8901175 8901193 CAGAACACTAGGCTCAACC 59 NA DesignNoJunction, InUTR Mus musculus 50 NM_010478.2 ENSMUSG00000073416 ENSMUST00000097340 2 1 1 60 17 35093634 35093655 ACACTTTGTCTTAGAGATGACC 59 35093674 35093694 GGGAAGACATATAGTCTAGCT 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Il11ra1 ENSMUSG00000073889 ENSMUST00000108041,ENSMUST00000108040,ENSMUST00000098132,ENSMUST00000108042 3 4 4 104 4 41712170 41712266 GAGAGTCAGAGGGAAAGTC 58 41712333 41712352 GTACTCACTCCAGAACTCTG 59 NA Nonspecific Mus musculus 50 Cep63 ENSMUSG00000074117 ENSMUST00000098450 2 1 1 70 9 102488426 102488444 CATCAGCACGTAAACATCC 58 102488374 102488393 TATATGGAGTAGATGGGCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000021274 ENSMUSG00000074466 ENSMUST00000098928 3 1 1 69 3 89198262 89198280 AAACTGAGACCCTACAGTG 58 89198311 89201896 CGATATAGTAAGACTCCTCGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mocs3 ENSMUSG00000074576 ENSMUST00000099071 3 1 1 61 2 168057243 168057261 CTCTCCACATCCCTTTGAG 59 168057286 168057304 CCCTAAGAGTTTCAGGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hps6 ENSMUSG00000074811 ENSMUST00000099393 2 1 1 60 19 46079737 46079756 CGGATGTATGGAAGAAGGTC 59 46079779 46079797 ATTCCATTGGGATGTTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 6430553K19Rik ENSMUSG00000075042 ENSMUST00000099718 2 1 1 84 16 48131391 48141403 CTTTAAAGACGGAAGAATGCTG 59 48131328 48131346 CTGTTTGGCTGTAGGTCTC 59 NA Mus musculus 50 Olfr32 ENSMUSG00000075066 ENSMUST00000099755,ENSMUST00000111505 2 2 2 60 2 89978949 89978967 CTCTTGCTTACAGTGATGG 57 89978907 89978926 TGTAGTAAAGAGGTTTGCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1177 ENSMUSG00000075128 ENSMUST00000099826 1 1 1 60 2 88184786 88184804 CCTGTTCTTCGTGTTTCTG 58 88184744 88184762 AATCATACCCAGGTTTCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1048 ENSMUSG00000075195 ENSMUST00000099900 1 1 1 60 2 86076235 86076253 AACTTGTGGGTCTCATCTG 59 86076193 86076213 GTACATGAAGAGTAGAGTTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp652 ENSMUSG00000075595 ENSMUST00000107717,ENSMUST00000091565 1 2 2 85 11 95614715 95614733 GAAAGTCTTTCAAGCGCAG 59 95614782 95615233 ATCGCAGTTCTCACATCTG 59 NA Mus musculus 50 IGKV5-37 ENSMUSG00000076571 ENSMUST00000103372 3 1 1 87 6 69913599 69913820 TTTCTGGATTTCAGCCTCC 59 69913530 69913549 AAGACTGACTGTTTCTCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV6-25 ENSMUSG00000076582 ENSMUST00000103383 1 1 1 60 6 70165440 70165459 TTCAGGCATTTGTATTCGTG 58 70165660 70165678 GTCATCACAATGTCTCCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV5-9 ENSMUSG00000076639 ENSMUST00000103448 1 1 1 84 12 114900163 114900181 ATACCATGTCTTGGGTTCG 59 114900097 114900115 TAGTAGGTGTTACCACCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 EG435328 ENSMUSG00000076729 ENSMUST00000103538 1 1 1 60 12 116842337 116842356 CTGATTATGCTATGCACTGG 58 116842296 116842314 ACTCCAATCCACTCTAGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S12 ENSMUSG00000076743 ENSMUST00000103552 3 1 1 61 12 117238425 117238446 CACAAGCTACGATATAAACTGG 58 117238385 117238403 ATCCAATCCACTCAAGTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRGC4 ENSMUSG00000076757 ENSMUST00000103566 1 1 1 80 13 19442234 19444080 GGAAGAAAGGATATGTTGCAG 59 19444122 19444140 CATGCTCTTGAAGAACAGG 58 NA Mus musculus 50 4932414J04Rik ENSMUSG00000078962 ENSMUST00000109573 1 1 1 99 11 21404262 21405507 AGAAACATCCTCTTTCATCC 57 21404182 21404201 TGTCTCCTAGAGACAATACC 57 NA InUTR Mus musculus 50 D130040H23Rik ENSMUSG00000079038 ENSMUST00000110214 2 1 1 93 8 71824712 71825901 ACATAGAAGGCATGAAAGAGG 59 71825956 71825974 ATGCCCTTGAAGATGACTG 59 NA Mus musculus 50 Klrb1b ENSMUSG00000079298 ENSMUST00000032472 3 1 1 80 6 128769075 128770291 ATACAACAGGTTGTTCAGCT 59 128769014 128769032 CTTGAGAAACGTGAAAGCA 58 NA Mus musculus 50 NP_001092775.1 ENSMUSG00000079536 ENSMUST00000114125 2 1 1 167 X 71726394 71726412 ATCAACTGGAAATCGAAGC 58 71725759 71725953 GTAGTCCATCTAACAGCCA 58 NA Mus musculus 50 Ssxb6 ENSMUSG00000079702 ENSMUST00000101691 2 1 1 94 X 8124801 8124819 AAGAGTGGGTAAAGCTGAC 59 8124426 8124743 GTTCACAGTGACACCTAGG 59 NA Mus musculus 50 Nalcn ENSMUSG00000000197 ENSMUST00000072254 2 1 2 138 14 123859645 123885620 CTACCTTGCAGAGGTTCTG 59 123859525 123859544 CATAACTATCAGGAGGCTGG 59 NA Mus musculus 50 Cdh4 ENSMUSG00000000305 ENSMUST00000000314,ENSMUST00000108911 2 2 2 84 2 179179500 179514963 AGAGAAACTACTCAAAGTCGAG 59 179515008 179515026 GACTTTGAAGTCCAAGCTG 58 NA Mus musculus 50 Comt ENSMUSG00000000326 ENSMUST00000115609,ENSMUST00000000335 2 2 2 81 16 18410897 18411227 AGGACAAAGTTTCCATCCT 58 18410834 18410852 TCTAATGTGTCCACATCGT 58 NA Mus musculus 50 Uhrf1 ENSMUSG00000001228 ENSMUST00000113038,ENSMUST00000001258,ENSMUST00000113035,ENSMUST00000113039 3 4 4 81 17 56451624 56451643 TGATGTTGAGATCTGTAGGA 57 56451687 56452299 CTGAGAGTCATTCAAGAGC 57 NA Mus musculus 50 Clpb ENSMUSG00000001829 ENSMUST00000106999,ENSMUST00000001884 1 2 3 172 7 108835831 108835849 CAAGACACAAACTTGGCTG 59 108855092 108871229 AGTGACTAGGACTTCCAGAG 59 NA Mus musculus 50 Rapsn ENSMUSG00000002104 ENSMUST00000050323,ENSMUST00000111445 1 2 3 100 2 90877033 90882019 CCAGGTCAAGGACTATGAG 58 90882083 90882101 TCATGGCCCGATATTTGAG 59 NA Mus musculus 50 Dnaja3 ENSMUSG00000004069 ENSMUST00000115853 3 1 3 192 16 4693230 4693248 AAGAGGAAGCAGTATGACG 59 4693403 4696398 TGATAGTTTCTTCCTGAGGC 59 NA Mus musculus 50 Dnaja3 ENSMUSG00000004069 ENSMUST00000060067,ENSMUST00000115854 2 2 3 85 16 4693404 4694374 CCTCAGGAATACATCATGGA 58 4694419 4694440 CAGGTATCCATAATGTTCACAG 58 NA Mus musculus 50 Ly9 ENSMUSG00000004707 ENSMUST00000068878,ENSMUST00000004827,ENSMUST00000111277 2 3 3 128 1 173530037 173531121 TTGTCTACAAGAGACTGGAG 58 173529928 173529946 GCATCCATGTGTATGTCAC 58 NA Mus musculus 50 5730437N04Rik ENSMUSG00000004945 ENSMUST00000005053,ENSMUST00000024569 3 2 2 98 17 5433575 5439545 AGTGGTTCAATAAGGGCAC 59 5433495 5433513 ACCAGGCATAAAGAGAACC 59 NA Mus musculus 50 Nr1i3 ENSMUSG00000005677 ENSMUST00000075469 1 1 3 159 1 173147324 173147342 TTGCTACAAGATGGAGGAC 58 173147557 173148733 TTGCATACAGAAACCAGGG 59 NA Mus musculus 50 Cd247 ENSMUSG00000005763 ENSMUST00000086002,ENSMUST00000111431,ENSMUST00000005907,ENSMUST00000027849 3 4 4 105 1 167787567 167787586 AGAGGAATATGACGTCTTGG 58 167788600 167789358 CTGCAGTGCATTGTATACG 58 NA Mus musculus 50 1700037C18Rik ENSMUSG00000005983 ENSMUST00000115859,ENSMUST00000061056 1 2 3 167 16 3906289 3906848 AAATACAGCTTCCAGTTCCA 59 3906141 3906159 TCCTATGTCCTCTCCAAGG 59 NA InUTR Mus musculus 50 Elovl1 ENSMUSG00000006390 ENSMUST00000006557,ENSMUST00000102673,ENSMUST00000067896 3 3 3 155 4 118103160 118103685 GTTTCTGATGTCTGGTTGG 58 118103924 118104030 CGGAGGATAAATATCACTGTG 57 NA Mus musculus 50 Prkag3 ENSMUSG00000006542 ENSMUST00000081636,ENSMUST00000113672 2 2 2 82 1 74788071 74791041 TCAATGAATCTGGTCAGGTC 59 74787840 74787858 TAGGTGGTTGTAGGTTTGC 59 NA Mus musculus 50 Dio2 ENSMUSG00000007682 ENSMUST00000082432 1 1 1 60 12 91968411 91968430 GTTAAACTGGGTGAAGATGC 59 91968370 91968388 CTGATTCAGGATTGGAGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pou2f2 ENSMUSG00000008496 ENSMUST00000108415,ENSMUST00000108418,ENSMUST00000085970,ENSMUST00000108414,ENSMUST00000108413 1 5 8 87 7 25906043 25906061 ACCCGACATTAACCATCAG 59 25901162 25905866 TTCAGCCTTGATCTTGGTG 59 NA Mus musculus 50 Nfib ENSMUSG00000008575 ENSMUST00000107248,ENSMUST00000107247,ENSMUST00000107246,ENSMUST00000050872,ENSMUST00000107250,ENSMUST00000075543,ENSMUST00000107245 1 7 8 80 4 81999543 82005649 GAGAGTATCCAGAACACCC 58 81999481 81999499 TGATAGTATGGTTGGCTGG 58 NA Mus musculus 50 Raver1 ENSMUSG00000010205 ENSMUST00000115487,ENSMUST00000010349 2 2 3 114 9 20881078 20883663 ATTATCCCACAGATGTGGG 58 20880523 20880541 TCATTGAAGCTGCTAGGTG 59 NA Mus musculus 50 Lphn1 ENSMUSG00000013033 ENSMUST00000045393 3 1 3 83 8 86446996 86453369 GTGTCCCTTACATCTTCGT 58 86453416 86453434 CAGACTGATGCTCTGACTC 59 NA Mus musculus 50 Gorasp2 ENSMUSG00000014959 ENSMUST00000028509,ENSMUST00000112201 3 2 4 175 2 70526522 70527250 ATTACCAAGTCTGATGCCT 58 70528744 70528762 CAATGCCAGGTAAGTTTCG 59 NA Mus musculus 50 Mtap2 ENSMUSG00000015222 ENSMUST00000024639,ENSMUST00000114013 2 2 7 81 1 66448024 66448042 AAGAAACAGCTAATCTGCC 57 66448084 66458990 GTAAGTAAATCTTCCTCCACTG 58 NA Mus musculus 50 Slamf6 ENSMUSG00000015314 ENSMUST00000042184 3 1 2 113 1 173869573 173869591 GTATGCACAAGTCACTCGT 59 173871823 173878143 AAAGCCACTGTTTCCTCTC 59 NA Mus musculus 50 2700038C09Rik ENSMUSG00000016344 ENSMUST00000016488,ENSMUST00000108841,ENSMUST00000116367 2 3 3 87 2 180922782 180922800 TACAGTGTTGGAGTCTCCT 59 180922932 180922950 CATGGTTTCAGGAGTCAGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Glod4 ENSMUSG00000017286 ENSMUST00000017430,ENSMUST00000021205 3 2 2 81 11 76051308 76052966 CAATGACTTCATGGGAATCAC 59 76051247 76051265 AACTTTACTCAGTGGCCAC 59 NA Mus musculus 50 Q1ERP8-5 ENSMUSG00000017309 ENSMUST00000107164,ENSMUST00000107163,ENSMUST00000017453 1 3 3 80 11 101914838 101914857 TCCTGAATGTCTCAGAAACC 59 101914900 101915421 TCCTCCTCTGTAGACTGAC 59 NA Mus musculus 50 Mtmr4 ENSMUSG00000018401 ENSMUST00000103179,ENSMUST00000018545 1 2 3 96 11 87418098 87418194 CATTTCTGGTAAAGCTGGT 57 87418253 87418272 TTATAGATGTTGCGCTTCTC 57 NA Mus musculus 50 Ncor1 ENSMUSG00000018501 ENSMUST00000018645,ENSMUST00000108708,ENSMUST00000101067 2 3 8 90 11 62162916 62162934 AAGAAGCTATGAGGCAGTG 59 62158810 62162864 GCATATCAGACCCTCTAAAGG 59 NA Mus musculus 50 Styxl1 ENSMUSG00000019178 ENSMUST00000053906,ENSMUST00000111163,ENSMUST00000111164,ENSMUST00000111161,ENSMUST00000085960 1 5 5 101 5 136229801 136231284 CTTTATAGAACTTCACCTCAGG 57 136229721 136229739 TAATGCATGAGTAAGGCCA 58 NA Nonspecific Mus musculus 50 H13 ENSMUSG00000019188 ENSMUST00000079247,ENSMUST00000109828 1 2 5 99 2 152525997 152530370 ATGTTCAGTTATGAGGAGTCC 59 152530431 152530449 TCTTCTCTAGCCTCTTCGA 58 NA Mus musculus 50 Tmpo ENSMUSG00000019961 ENSMUST00000105293 3 1 6 95 10 90621560 90621578 AGCTGAAGCTTGAGAAGAG 59 90614533 90621501 TTTCTCCCACCTGATTGTG 59 NA Mus musculus 50 Tmpo ENSMUSG00000019961 ENSMUST00000092219 3 1 6 96 10 90621560 90621578 AGCTGAAGCTTGAGAAGAG 59 90615915 90621501 GAAGTTTCCACCTGATTGTG 59 NA Mus musculus 50 Ptprr ENSMUSG00000020151 ENSMUST00000063470 2 1 5 94 10 115485372 115485391 CTTAATCTGTTGGCTGAGTC 58 115485447 115597531 ATATCCATTTGCAGTGTCAC 58 NA Mus musculus 50 Tcfe2a ENSMUSG00000020167 ENSMUST00000105344,ENSMUST00000105343,ENSMUST00000105345,ENSMUST00000105341,ENSMUST00000020379 3 5 10 91 10 79876010 79876028 AAGAGGATGAGGAAATCGC 59 79873357 79875955 CTCATCTGTACTGCTGGTG 59 NA Mus musculus 50 Pttg1 ENSMUSG00000020415 ENSMUST00000101340,ENSMUST00000020687 3 2 3 86 11 43233906 43234622 ATCATGGGAATCTGATCCG 58 43233838 43233856 TCTGCATCGTAACAAACAG 58 NA Mus musculus 50 Osbp2 ENSMUSG00000020435 ENSMUST00000070552,ENSMUST00000101633 1 2 4 81 11 3617981 3626332 CTATGATCAACGCCTGTAGG 59 3617919 3617938 TGCTCATAATTTAGAGCCCG 59 NA Mus musculus 50 Ccdc104 ENSMUSG00000020462 ENSMUST00000020754,ENSMUST00000093243 2 2 2 80 11 29122873 29125865 CACCCTCAGAAGTTAAAGTG 58 29122812 29122830 AAGTTTCAGGCAACAACTC 58 NA Mus musculus 50 Llgl1 ENSMUSG00000020536 ENSMUST00000052346,ENSMUST00000108719 2 2 2 84 11 60526159 60526178 GGACCAGAGACATCATTCTG 59 60526225 60526435 GGTTCCATGGTATCAGCTC 59 NA Mus musculus 50 Tlk2 ENSMUSG00000020694 ENSMUST00000106939,ENSMUST00000106936,ENSMUST00000106941,ENSMUST00000015107 3 4 6 109 11 105140531 105142410 GAAGCAAAGGCATTTATCAGG 59 105142481 105142499 ACTGACTTTCGGATGTGAG 59 NA Mus musculus 50 Unk ENSMUSG00000020770 ENSMUST00000106452 1 1 2 111 11 115914337 115914356 CTTAAGTGATGATGTGCAGC 59 115914430 115914818 ATTCCTACAGAGGAGAGGG 59 NA Mus musculus 50 Stat5b ENSMUSG00000020919 ENSMUST00000004143,ENSMUST00000107358 3 2 2 81 11 100657851 100657945 ACTTCAGAAACATGTCCCT 58 100657788 100657806 ATCGTGAACTTCTCTTCCG 59 NA Mus musculus 50 Sfrs5 ENSMUSG00000021134 ENSMUST00000110354,ENSMUST00000110351,ENSMUST00000110352,ENSMUST00000110356 3 4 5 126 12 82048573 82048793 TGATAGACGAAATGCTCCAC 59 82050111 82050129 ATCCGCAAAGGTTACTTCC 59 NA Nonspecific Mus musculus 50 Wdr37 ENSMUSG00000021147 ENSMUST00000054251,ENSMUST00000021572 3 2 2 80 13 8848907 8852925 CACCAGCAAGATTGTTTCC 59 8848845 8848863 CTGTGGCCAATATACTCCT 58 NA Mus musculus 50 Prl8a8 ENSMUSG00000021346 ENSMUST00000018016 3 1 3 196 13 27603473 27604487 TTGTGATTATGCACTCCTG 57 27602338 27603313 ATTGGTTGTGGTAAAGCTC 57 NA Mus musculus 50 Spin1 ENSMUSG00000021395 ENSMUST00000057478,ENSMUST00000099516,ENSMUST00000095797 3 3 4 92 13 51239821 51239840 CCTATGAGAAAGACCCTGTC 59 51239895 51244339 GCGAATCATTGGAATCAGG 58 NA Mus musculus 50 Bmp4 ENSMUSG00000021835 ENSMUST00000074077,ENSMUST00000100676 2 2 2 91 14 47004377 47005398 ATCACGAAGAACATCTGGAG 59 47004305 47004323 CTCATTCTCTGGGATGCTG 59 NA Mus musculus 50 Cryl1 ENSMUSG00000021947 ENSMUST00000089502 2 1 2 132 14 57981863 57981881 GAGATGAAATCCCTGGAGC 59 57961026 57981767 ACCGTATCTGCTGAATGTG 59 NA Mus musculus 50 Atp8a2 ENSMUSG00000021983 ENSMUST00000042284 3 1 2 140 14 60664866 60664885 ATCATTCTAACGATTGCAGG 58 60662369 60663163 ATGGTTCTCCTCTTTCCAC 58 NA Mus musculus 50 Nefl ENSMUSG00000022055 ENSMUST00000022639 2 1 1 154 14 68704137 68704155 TCGAGATTGCAGCTTACAG 59 68704661 68704679 AGACATCAAGTAGGAGCTG 58 NA DesignNoJunction Mus musculus 50 Plec1 ENSMUSG00000022565 ENSMUST00000089610,ENSMUST00000074834,ENSMUST00000071869,ENSMUST00000076355,ENSMUST00000080857,ENSMUST00000073418,ENSMUST00000076442,ENSMUST00000054449,ENSMUST00000072692,ENSMUST00000023226 2 10 10 81 15 76023704 76023723 AAATGATGACATTGCTGACG 59 76022769 76023660 GTCTGAGATCTGGAAGTGC 59 NA Mus musculus 50 Stxbp5l ENSMUSG00000022829 ENSMUST00000114782,ENSMUST00000114780,ENSMUST00000114790,ENSMUST00000023526,ENSMUST00000114778 2 5 10 81 16 37188700 37188720 ATAGATCAAGTGACCTGTACC 58 37174433 37188657 TTCAGCTCTGTTAAGCCTG 59 NA Mus musculus 50 Gtf2ird1 ENSMUSG00000023079 ENSMUST00000111245,ENSMUST00000111244,ENSMUST00000100650 2 3 7 82 5 134839845 134851991 TTATCCCAAAGCCTGATGAG 59 134839782 134839800 ATTGAAGAGCTCCTTCACC 59 NA Mus musculus 50 Tulp2 ENSMUSG00000023467 ENSMUST00000085331 3 1 5 104 7 52771699 52771894 CAGATGGGAGTGTATACACTC 59 52771960 52771978 CTTCCATGGTCACTTCCTC 59 NA Mus musculus 50 Pigx ENSMUSG00000023791 ENSMUST00000096109,ENSMUST00000024553 3 2 2 80 16 32085416 32087390 CTGTGACCAAGAGTTTCCA 59 32085354 32085373 ATCTCCTCACTCTTCAAAGC 59 NA Mus musculus 50 Rshl2b ENSMUSG00000023806 ENSMUST00000115754 3 1 2 85 17 7152380 7152398 CTACACCTATTCCAGCAGG 59 7146092 7152331 TAGGTTCTTCAACTGGCTG 59 NA Nonspecific Mus musculus 50 Jmjd2b ENSMUSG00000024201 ENSMUST00000025036 2 1 2 156 17 56539482 56540657 CATCTACCAGGTAGAGTTTGAG 59 56541004 56541022 CTTCACATCGTCTCCAGAG 59 NA Mus musculus 50 Thada ENSMUSG00000024251 ENSMUST00000047524,ENSMUST00000025099 2 2 2 80 17 84831718 84834905 ACAGTTCCAGGATTCTGAG 58 84831656 84831674 CAATCATAAGGCTTGGTGC 59 NA Mus musculus 50 Elp2 ENSMUSG00000024271 ENSMUST00000025120 2 1 2 82 18 24770953 24770971 ATACCTTCAGACCTTGAGC 58 24771016 24772925 ATACTGGCACATTAGTACCA 58 NA Mus musculus 50 Atp9b ENSMUSG00000024566 ENSMUST00000025458 2 1 3 99 18 80932880 80933560 GCTTTCTTAGATGTTGCCT 57 80932799 80932817 AGTACTTGAGCACGTAGAG 58 NA Mus musculus 50 Pitpnm1 ENSMUSG00000024851 ENSMUST00000049658,ENSMUST00000100022 1 2 2 80 19 4103472 4104818 CATCCATGACGTAGGTCTG 59 4104860 4104880 AGTTCTATCCACTCATCTTGC 59 NA Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000111658,ENSMUST00000111659,ENSMUST00000111653 2 3 15 161 19 55985100 55985118 CTCTCCATATTACCCGCTG 59 55987130 55991843 CTAGAGGACAGAAAGCTAGAC 59 NA Mus musculus 50 Pik3ap1 ENSMUSG00000025017 ENSMUST00000116503,ENSMUST00000059672 1 2 2 82 19 41399164 41402334 CGATATGATGACAAATCAGAGG 58 41399103 41399121 CAGTGAGGTTCTTCAGTCC 59 NA Mus musculus 50 Gyk ENSMUSG00000025059 ENSMUST00000113978,ENSMUST00000026039,ENSMUST00000069684 3 3 4 125 X 82991637 82999685 TCTATAATGCCGTGGTGTG 59 82989157 82989176 TGAAATACGTGCTAAGTGGA 59 NA Mus musculus 50 Ablim1 ENSMUSG00000025085 ENSMUST00000111559,ENSMUST00000111558,ENSMUST00000111555,ENSMUST00000079360,ENSMUST00000111546,ENSMUST00000111541 1 6 15 92 19 57123991 57125629 CATGTTCCAGATCAAGGGA 58 57121521 57121539 ATCTTCTGAAGCCTTGCTC 59 NA Mus musculus 50 Ptprj ENSMUSG00000025314 ENSMUST00000111495,ENSMUST00000026352,ENSMUST00000111493 1 3 3 81 2 90298582 90299613 ATCTGTTCTGTACGGAACC 58 90298519 90298537 CACTTGAGAACCAATGCTG 59 NA Mus musculus 50 Banp ENSMUSG00000025316 ENSMUST00000026354,ENSMUST00000093078 2 2 2 109 8 124544535 124547911 AATGATCCAGGTACTGCAG 59 124547983 124548002 ACTGAACCTGAATGTCACTG 59 NA Mus musculus 50 Odf3 ENSMUSG00000025482 ENSMUST00000026555,ENSMUST00000106049 3 2 2 115 7 148036171 148036189 CAAGTGACCAAGTTCAAGG 58 148036268 148036616 TTCAAGGTCACCTTCTCAG 58 NA Mus musculus 50 Hgs ENSMUSG00000025793 ENSMUST00000106203,ENSMUST00000026900 3 2 3 166 11 120340058 120340409 CCTTTAGTGAGCAGTACCAG 59 120340538 120340556 GATGGACTGGAAGAGTGAC 59 NA Mus musculus 50 Mybl1 ENSMUSG00000025912 ENSMUST00000115468 2 1 2 86 1 9660084 9662302 AGACATGCAGTCAAATTGTG 59 9660017 9660037 TATCTTCTCGCTTGTTCAGTC 59 NA Mus musculus 50 Cnga3 ENSMUSG00000026114 ENSMUST00000027288 2 1 1 60 1 37314916 37314934 TTTAGACATGCTGGTTCGA 58 37317555 37317573 ATCTCTGACCATTAGGCCT 59 NA DesignNoJunction Mus musculus 50 2310035C23Rik ENSMUSG00000026319 ENSMUST00000086721 3 1 2 80 1 107583531 107583550 GAGTTTGAACTACGGAAAGC 59 107583593 107583720 AGGAACTTCATGTTCTGCA 59 NA Mus musculus 50 Rgs7 ENSMUSG00000026527 ENSMUST00000097459,ENSMUST00000097460 1 2 5 80 1 177008373 177008391 ATGAAGAGCGACTCATACC 58 177007000 177008331 GTTTCCAGACTTTCTCTTTGC 59 NA Mus musculus 50 Fmo9 ENSMUSG00000026560 ENSMUST00000027843,ENSMUST00000111405 3 2 2 86 1 168606694 168606712 GAGCCTAGTCTTTGATGGG 59 168604689 168606644 TTCTCAATGCCTGGAAAGG 59 NA Mus musculus 50 Sec16b ENSMUSG00000026589 ENSMUST00000086130,ENSMUST00000027881,ENSMUST00000111700 2 3 3 80 1 159459622 159461415 CACCTGTACTCAAGGTCAG 59 159461458 159461477 TCCATAAGCATACTCATCCC 58 NA Mus musculus 50 Dclre1c ENSMUSG00000026648 ENSMUST00000100463,ENSMUST00000102988,ENSMUST00000100462,ENSMUST00000061852,ENSMUST00000115069 2 5 7 103 2 3346595 3346614 CCAAAGTACAGATTCTGGGA 59 3351074 3353723 ACAACCTCTTCCTTCTCAC 58 NA Mus musculus 50 Meig1 ENSMUSG00000026650 ENSMUST00000064685,ENSMUST00000115084,ENSMUST00000115083,ENSMUST00000115082,ENSMUST00000115081 2 5 5 60 2 3329120 3329138 ACAAGTGAAACAAGTTGCC 59 3326557 3326575 AAGTTTCTTCACGTACCCT 58 NA DesignNoJunction Mus musculus 50 Dusp12 ENSMUSG00000026659 ENSMUST00000027970,ENSMUST00000046476 3 2 2 100 1 172810328 172810347 TTTACCTCAGGAACTCTTCG 59 172809964 172810265 TAAATAAAGACCGCCTGCA 59 NA InUTR Mus musculus 50 Acvr1 ENSMUSG00000026836 ENSMUST00000112599,ENSMUST00000090935,ENSMUST00000112601,ENSMUST00000056376 2 4 5 80 2 58311344 58311363 TAAGAGGGTCGATATTTGGG 58 58300843 58311302 TCTTCCACTATACCATTGCT 58 NA Mus musculus 50 Fubp3 ENSMUSG00000026843 ENSMUST00000113477 3 1 4 116 2 31468616 31471024 AACAAGTCCCAAGTCATCC 59 31471102 31471122 CTAAAGTCTGCCCATAGAAGG 59 NA Mus musculus 50 Hspa5 ENSMUSG00000026864 ENSMUST00000028222,ENSMUST00000100171 1 2 2 98 2 34628820 34629351 GAAAGAAGGTTACCCATGC 58 34629412 34629431 CATTCAGTCCAGCAATAGTG 58 NA Mus musculus 50 Kynu ENSMUSG00000026866 ENSMUST00000028223,ENSMUST00000100129,ENSMUST00000050511,ENSMUST00000112826 3 4 4 82 2 43418587 43418608 TGGATGAGGAAGATAAACTGAG 59 43418648 43436876 AGATAGATCAATTGAAGGCAGG 59 NA Mus musculus 50 Zfp385b ENSMUSG00000027016 ENSMUST00000111830,ENSMUST00000111831,ENSMUST00000090766 2 3 5 80 2 77253832 77253850 CTCTACTGCTCACTATGCA 58 77252792 77253789 GGTCTTGTGTTTAGATCCTG 57 NA Mus musculus 50 Arhgap1 ENSMUSG00000027247 ENSMUST00000111329,ENSMUST00000111331,ENSMUST00000070873,ENSMUST00000090614,ENSMUST00000111330 3 5 5 123 2 91510715 91510875 TTCCTGGTGCAGATATCTG 58 91510962 91510980 GATTGATAGCCTTGAGGGT 58 NA Mus musculus 50 Ppp1r14d ENSMUSG00000027317 ENSMUST00000110820,ENSMUST00000076084 1 2 2 81 2 119044503 119044521 AGATCAAAGGACACAGCTG 59 119044133 119044151 TTGACTGAGTAGCTCAGAG 58 NA DesignNoJunction Mus musculus 50 Acoxl ENSMUSG00000027380 ENSMUST00000028859 2 1 2 80 2 127697016 127697035 TTATTTGGTGGTGCAATCAG 58 127697077 127697857 ATACTTCTGCTCCTTGAGTG 59 NA Mus musculus 50 Kif3b ENSMUSG00000027475 ENSMUST00000028977,ENSMUST00000099189 2 2 2 64 2 153155452 153155470 TTTGAAAGTACTGCCAGCA 59 153155806 153155824 GAGGATCCTGATTTCCTGC 59 NA DesignNoJunction Mus musculus 50 BC006779 ENSMUSG00000027580 ENSMUST00000108831,ENSMUST00000094203 2 2 4 121 2 180965836 180965945 TTTCACAAGGCATCTACCA 58 180965733 180965751 GTGAACTGTTTCTGCAGAG 58 NA Mus musculus 50 Ppm1l ENSMUSG00000027784 ENSMUST00000029355,ENSMUST00000068481 3 2 2 60 3 69353372 69353390 TTACCAGCTGAAGGAAAGG 59 69356753 69356772 GCCATTAAAGCTGATGAACC 59 NA DesignNoJunction Mus musculus 50 Arhgef2 ENSMUSG00000028059 ENSMUST00000029694,ENSMUST00000107510 1 2 2 80 3 88435833 88435851 CATGTAACGTGACCATCCA 59 88435895 88436210 CAGCTTTCTGTTGCTTCTG 59 NA Mus musculus 50 Invs ENSMUSG00000028344 ENSMUST00000030029,ENSMUST00000107713,ENSMUST00000107710,ENSMUST00000107707 2 4 5 128 4 48398130 48402834 GTGAGATGTATCCTGGACG 59 48402925 48402944 ATAGGAGGTCAAGACATCCA 59 NA Mus musculus 50 Nfx1 ENSMUSG00000028423 ENSMUST00000098143,ENSMUST00000091614,ENSMUST00000030133 2 3 3 80 4 40943938 40946728 GAACAAAGGAACTTCCGTG 58 40950073 40950092 ATCGTTTCTTGTTACACCGT 59 NA Mus musculus 50 Ccdc107 ENSMUSG00000028461 ENSMUST00000030181 1 1 2 69 4 43508473 43508491 GAGTGGAAGTTCCAGAACC 59 43508599 43508617 GCTTCTTGGTCTTCTTTCC 58 NA DesignNoJunction Mus musculus 50 Psip1 ENSMUSG00000028484 ENSMUST00000030207 1 1 4 123 4 83106422 83107097 GAAGCGAGAAACATCAATGG 59 83106115 83106133 AAGTGAAGCGAGTTCATCC 59 NA Mus musculus 50 Dab1 ENSMUSG00000028519 ENSMUST00000106827,ENSMUST00000080139,ENSMUST00000106830,ENSMUST00000030244,ENSMUST00000106826,ENSMUST00000106825 2 6 6 88 4 104278028 104285777 ATGATGAAGCTCAAGGGTG 59 104285829 104285847 ATTCCTCCAAAGGAGATGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 1110049F12Rik ENSMUSG00000028669 ENSMUST00000105851,ENSMUST00000030428 2 2 2 85 4 135541906 135541924 CAATGTCAAGCTGAAAGGC 59 135534800 135541859 GTGGAATGTTCTTGTACAGTC 58 NA Mus musculus 50 Epha5 ENSMUSG00000029245 ENSMUST00000113398 2 1 8 107 5 84666499 84666517 CACAGTTACACCCATGAGG 59 84585548 84666428 GACTGGAGAAGGAGTTGTG 59 NA Mus musculus 50 Mtf2 ENSMUSG00000029267 ENSMUST00000112623,ENSMUST00000112628,ENSMUST00000081567 3 3 4 81 5 108529995 108533049 GACTCAAGGGAAGTAAGCA 58 108533094 108533112 TTCTTGTATATGGGCCAGG 58 NA Mus musculus 50 Shroom3 ENSMUSG00000029381 ENSMUST00000113055,ENSMUST00000113054,ENSMUST00000113051 2 3 3 124 5 93391378 93393390 AAAGAGGAAAGGAGTTCTCTG 59 93393476 93393494 TAGTTGGCCAGGATATCCA 59 NA Mus musculus 50 Zkscan1 ENSMUSG00000029729 ENSMUST00000066617,ENSMUST00000019660,ENSMUST00000110963,ENSMUST00000110962 1 4 4 60 5 138535336 138535354 TTCATCTAGGAAGCCTCGT 59 138541828 138541846 TGACTCATTCCCATTCCTG 58 NA DesignNoJunction Mus musculus 50 Exoc4 ENSMUSG00000029763 ENSMUST00000052266 1 1 5 83 6 33860622 33868414 GAAGTGAGAGTTCATTGTTTCC 59 33868458 33868476 CATACTCTCCACATTGGCA 59 NA Mus musculus 50 Zc3hav1 ENSMUSG00000029826 ENSMUST00000114900,ENSMUST00000039710,ENSMUST00000031850 1 3 4 91 6 38281851 38282149 TGCTGAGTATTCCCTATGC 58 38281778 38281797 TGTACAGATGATCCAGACAG 58 NA Mus musculus 50 Dyrk4 ENSMUSG00000030345 ENSMUST00000112234,ENSMUST00000032495 2 2 3 90 6 126827352 126830265 GACTTTCTCAGAAGGTGGG 59 126827280 126827298 GTTTGAATTTCCTCGGCTC 59 NA Mus musculus 50 Fchsd2 ENSMUSG00000030691 ENSMUST00000098250 3 1 2 81 7 108392658 108392678 GCTGTTTCTACAAGAGAATGC 59 108392719 108398967 TTGTCGACTAGTATCACTGTC 58 NA Mus musculus 50 Aldoa ENSMUSG00000030695 ENSMUST00000106348,ENSMUST00000032934,ENSMUST00000087566 2 3 3 139 7 133939632 133939742 GTTACTGAGAAGGTCCTGG 58 133939511 133939529 ATGGCAATCTCCTCATTGG 59 NA Mus musculus 50 A930008G19Rik ENSMUSG00000030956 ENSMUST00000097999,ENSMUST00000065371,ENSMUST00000106169,ENSMUST00000106168 3 4 8 98 7 139951138 139951156 TGACAAGAAGATCGGTGTG 59 139907672 139951076 AAGGTCTGACAGTTCTGTG 59 NA Mus musculus 50 Porcn ENSMUSG00000031169 ENSMUST00000077595,ENSMUST00000082320,ENSMUST00000089403,ENSMUST00000089402,ENSMUST00000115602 3 5 5 125 X 7776272 7776370 TTATGTGGAACATGTCCTCAG 59 7775186 7775204 AAGTTTAAGGCTCGTACCC 59 NA Mus musculus 50 4930447F04Rik ENSMUSG00000031182 ENSMUST00000033525 3 1 1 60 X 63557211 63557231 GGTAACATTGACTCCAATGAC 58 63557171 63557190 TCTCAATGGAATAAACGGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cstf2 ENSMUSG00000031256 ENSMUST00000113287,ENSMUST00000113286,ENSMUST00000113291,ENSMUST00000033609,ENSMUST00000113283,ENSMUST00000113281 1 6 6 103 X 130596362 130596917 AAATGAAGCTCTGTGTCCA 59 130596984 130597002 TCTCATCACTACCTGTGCT 59 NA Mus musculus 50 Acsl4 ENSMUSG00000031278 ENSMUST00000033634,ENSMUST00000112904,ENSMUST00000112903,ENSMUST00000112907 2 4 4 80 X 138768260 138768279 TACACTACTGGAAGAGTTGG 58 138766913 138768218 AACTGTATAACCACCTTCCT 57 NA Mus musculus 50 Pak3 ENSMUSG00000031284 ENSMUST00000070348,ENSMUST00000112868,ENSMUST00000112865,ENSMUST00000112864 1 4 6 80 X 140144226 140144246 TCTCTTCCTTCAGACTTTGAG 59 140144288 140149693 TTGCTCAGGAATTCCAGTG 59 NA Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112408,ENSMUST00000112406 3 2 10 122 X 156876220 156876239 TGTCATTCTCGTTACATCCC 59 156896812 156899290 ACTTCTGAAGCAGCATCTG 59 NA Mus musculus 50 Rbbp7 ENSMUSG00000031353 ENSMUST00000033720,ENSMUST00000112326,ENSMUST00000112321 1 3 4 101 X 159206917 159207701 AGTGACAAGGGAGAATTCG 59 159207764 159207784 CATATAACGAGCACGATTCAC 59 NA Mus musculus 50 Ctps2 ENSMUSG00000031360 ENSMUST00000112303,ENSMUST00000033727,ENSMUST00000112301,ENSMUST00000112300 2 4 7 81 X 159413146 159413164 ATTTGGGAGGAACAATGAG 57 159413208 159434652 TCACCATAAAGCTTCTTCAG 57 NA Mus musculus 50 Nudt7 ENSMUSG00000031767 ENSMUST00000073521,ENSMUST00000109109 2 2 3 186 8 116660362 116660380 TATTTGATGTTCACGGTCC 57 116671933 116671951 CAAATACGTATGGCACCAG 58 NA DesignNoJunction Mus musculus 50 Nudt7 ENSMUSG00000031767 ENSMUST00000073521,ENSMUST00000109109 1 2 3 186 8 116660361 116660380 GTATTTGATGTTCACGGTCC 58 116671932 116671950 AAATACGTATGGCACCAGG 59 NA DesignNoJunction Mus musculus 50 Cmtm3 ENSMUSG00000031875 ENSMUST00000034343 1 1 1 72 8 106869254 106869272 GAGACTCTGGGAATGAGAC 58 106870647 106870665 TAGTCAGAGTCTGAGTCCG 59 NA DesignNoJunction Mus musculus 50 Thy1 ENSMUSG00000032011 ENSMUST00000114840,ENSMUST00000034509 3 2 2 117 9 43855027 43855432 TGTATAGAGACAAGCTGGTC 58 43855512 43855530 AGAGAAATGAAGTCCAGGG 58 NA Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113685,ENSMUST00000050905,ENSMUST00000113684,ENSMUST00000030185 2 4 16 83 9 66877542 66878847 ATGACTTAGAAGACGAGCTG 59 66877478 66877496 TCATATCGTTGAGAGCGTG 59 NA Mus musculus 50 Gpbp1 ENSMUSG00000032745 ENSMUST00000047627,ENSMUST00000091236,ENSMUST00000116379,ENSMUST00000109274 1 4 4 80 13 112216846 112223763 GTGAACAGTTACAGAAGAATGG 59 112216787 112216805 AGGGTCCAAACTTGAAGTC 59 NA Mus musculus 50 Itgbl1 ENSMUSG00000032925 ENSMUST00000100289 3 1 3 94 14 124239827 124239846 GACATGGACTCATTTATGGT 57 124239903 124245674 ACATACACATGTTCCTCCA 58 NA Mus musculus 50 Idua ENSMUSG00000033540 ENSMUST00000112563,ENSMUST00000071650,ENSMUST00000045900 3 3 3 80 5 109109158 109109176 GTGGAACTTTGAGACTTGG 58 109109220 109109326 TAATTCAGGAAGCCTTGTG 57 NA Mus musculus 50 Pcgf3 ENSMUSG00000033623 ENSMUST00000046975 2 1 2 83 5 108924978 108928651 CTCCTTTAATGAGCTGGAC 57 108928698 108928716 CATCTTGTAACAACCACGA 57 NA Mus musculus 50 Vps8 ENSMUSG00000033653 ENSMUST00000096192 3 1 4 81 16 21533223 21543348 AATCATATGGAGAACCAGCT 58 21554152 21554170 CCTGATTGACATGAACACC 58 NA Mus musculus 50 Pabpc5 ENSMUSG00000034732 ENSMUST00000040961,ENSMUST00000113366,ENSMUST00000113368 2 3 3 60 X 117041848 117041866 AATGGTAAACCATTTCGCC 58 117041889 117041908 CTCCAGACTTTCTTAAACGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tjp3 ENSMUSG00000034917 ENSMUST00000045744 2 1 2 121 10 80741457 80741475 GAATGGTATGCCATTTCGG 58 80740796 80741375 CCATCTTCTTAAAGATGTCCTG 58 NA Mus musculus 50 Mid1 ENSMUSG00000035299 ENSMUST00000112104,ENSMUST00000112107,ENSMUST00000112108,ENSMUST00000036753,ENSMUST00000112105,ENSMUST00000078947 2 6 7 158 X 166404083 166414865 ATGTTGAAGTCAATGCATCC 58 166419841 166419859 TACAGTTTGCAATCTGCTG 58 NA Mus musculus 50 Midn ENSMUSG00000035621 ENSMUST00000042057 2 1 2 167 10 79614446 79614464 TGGAAAGTTTGACCGAGAC 59 79616462 79616576 ACAGAAAGTCACTGACCTG 59 NA Mus musculus 50 Rif1 ENSMUSG00000036202 ENSMUST00000112693,ENSMUST00000069794 1 2 3 110 2 51971815 51971833 AGATGACATTGATAGGCGT 58 51971904 51972198 GTGGTATTATGCTTAGAGTGTG 58 NA Mus musculus 50 March1 ENSMUSG00000036469 ENSMUST00000110258,ENSMUST00000110259,ENSMUST00000098708,ENSMUST00000072482,ENSMUST00000110253 2 5 7 89 8 68980086 68992135 AGGTAACGACAATGGTGTG 59 68992188 68992206 TACATGAAGACGAGACCTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Etl4 ENSMUSG00000036617 ENSMUST00000114610,ENSMUST00000114627,ENSMUST00000114624,ENSMUST00000114620,ENSMUST00000114619,ENSMUST00000045555,ENSMUST00000114614,ENSMUST00000114609,ENSMUST00000066509 2 9 12 93 2 20635065 20665093 GAGACATGAGGATGCAGAG 59 20665150 20665168 ATTACATGAGGTGGGTGAG 58 NA Mus musculus 50 Gtdc1 ENSMUSG00000036890 ENSMUST00000112810,ENSMUST00000049051 2 2 5 130 2 44490829 44607577 GATGTGAGCAGATTCATGC 58 44490717 44490736 GACTTCTCAGAAACCCTCTG 59 NA Mus musculus 50 Hk1 ENSMUSG00000037012 ENSMUST00000099691 3 1 2 94 10 61755127 61755146 AAAGCCTCTTATTTGAAGGG 57 61753132 61755071 TTCCTTATCCGTTTCAATGG 57 NA Mus musculus 50 Nek5 ENSMUSG00000037738 ENSMUST00000081815 2 1 2 82 8 23199328 23199346 GAGCACAGATGTAAGGAGG 59 23196046 23199282 AAGAAACCCTCTGCTTCTG 59 NA Mus musculus 50 Mll3 ENSMUSG00000038056 ENSMUST00000045291 1 1 3 91 5 24787212 24787490 GTTTGTGTTAAGGCCTCAC 58 24787139 24787157 TACTGTAGGGTGCATTCAG 58 NA Mus musculus 50 Prdm16 ENSMUSG00000039410 ENSMUST00000105638,ENSMUST00000070313,ENSMUST00000097759 1 3 6 120 4 153711839 153714847 CATGGATCCCATCTACAGC 59 153709357 153711755 TTCTATGGCTGACATCTGG 58 NA Mus musculus 50 Dnajc11 ENSMUSG00000039768 ENSMUST00000103200,ENSMUST00000062904,ENSMUST00000105666 1 3 3 97 4 151324544 151324562 TATGCTTTACCATCCGGAC 59 151324622 151326959 CACTAAGCACTTCATAAGCC 58 NA Mus musculus 50 2410089E03Rik ENSMUSG00000039801 ENSMUST00000110617,ENSMUST00000044206 2 2 3 80 15 8209856 8210529 GTATATCCAGGATTCAGCGT 59 8210572 8210590 GCATCCAGGCTTTAATCTC 58 NA Mus musculus 50 Ankrd6 ENSMUSG00000040183 ENSMUST00000084748,ENSMUST00000084750,ENSMUST00000035719,ENSMUST00000108168,ENSMUST00000084749 1 5 7 170 4 32923352 32923370 TCATCTTTCTGTGGTGCAG 59 32914152 32915693 GTATTCCCATCCTTGTCCTG 59 NA Mus musculus 50 Parc ENSMUSG00000040327 ENSMUST00000066026 3 1 2 99 17 46648270 46648396 CAATCAGAGGAGGTGTCAG 59 46648189 46648207 GACCATTGTCAGAGGTGAG 59 NA Mus musculus 50 1810074P20Rik ENSMUSG00000040359 ENSMUST00000038705 3 1 2 101 4 25205837 25207778 TCCGAGGTGGTTATTAATGTG 59 25205756 25205774 AATCAGTTGTCCCAGTACC 58 NA Mus musculus 50 Erg ENSMUSG00000040732 ENSMUST00000113845 2 1 4 87 16 95600771 95600789 ACATCTGACTTCCGATGAC 59 95591654 95600723 AGGCTCATAAGGTAAATCTGTG 59 NA Mus musculus 50 Dlk1 ENSMUSG00000040856 ENSMUST00000056110,ENSMUST00000109844,ENSMUST00000109843,ENSMUST00000109846,ENSMUST00000109841 3 5 5 111 12 110696416 110697825 TGATCAATGGTTCTCCCTG 58 110697900 110697918 ATCTCACAGAAGTTGCCTG 59 NA Nonspecific Mus musculus 50 Mtap7d2 ENSMUSG00000041020 ENSMUST00000112471 3 1 5 86 X 155898227 155898246 TCTAACTTTAGCAACCAGCA 59 155898295 155900061 GAAAGTTTGTCACATGCGT 59 NA Mus musculus 50 0610009K11Rik ENSMUSG00000041241 ENSMUST00000105813,ENSMUST00000044058,ENSMUST00000105814 2 3 4 112 4 137994174 137994192 AAAGAAACACTCAACAGCC 58 137994268 137994874 TAGTCATTCCAAAGGTGGG 58 NA Mus musculus 50 Smpx ENSMUSG00000041476 ENSMUST00000038007 2 1 3 131 X 154158928 154158947 TGTCAACTTGTCTGAGATCC 59 154189556 154190116 AAACACGTCAACGAAATGC 59 NA InUTR Mus musculus 50 Gjb3 ENSMUSG00000042367 ENSMUST00000046532,ENSMUST00000106091 3 2 2 61 4 127003577 127003596 GGACCTACTTGTTTAGCCTC 59 127003535 127003553 GAGAACGTACAGGAAGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nek10 ENSMUSG00000042567 ENSMUST00000112631,ENSMUST00000112630,ENSMUST00000063220 2 3 3 80 14 15698242 15717577 GACAGTTACTGACTTTGGC 58 15717621 15717639 GAATAGAGGATCGTTCCCA 58 NA Mus musculus 50 Bclp2 ENSMUSG00000043873 ENSMUST00000054973,ENSMUST00000106751 3 2 3 89 3 105822568 105822586 CCCAAGATGGCTATACTGG 59 105822231 105822518 TGATGTAATCCACATTGAGGAG 59 NA Mus musculus 50 BC024139 ENSMUSG00000044361 ENSMUST00000054022,ENSMUST00000089654 1 2 3 83 15 75955200 75955500 TTCTCAGTAGTGATCAAGCTC 59 75955137 75955155 TGGCTTGTGATTCAGTCAG 59 NA Mus musculus 50 Csnk2a2 ENSMUSG00000046707 ENSMUST00000056919 3 1 2 88 8 97981381 97983982 ACTATGACCAGCTTGTTCG 59 97981311 97981330 TGGATCTAGGTCTATGTGGT 59 NA Mus musculus 50 D030070L09Rik ENSMUSG00000047989 ENSMUST00000055012 2 1 1 169 18 24271233 24271251 TAGCTGGCAAGAAGAACAG 59 24265148 24270222 TGTGTAGTTGGCAAGAAGG 59 NA Mus musculus 50 MGI:2446196 ENSMUSG00000048201 ENSMUST00000035327,ENSMUST00000099282 2 2 2 65 2 146040407 146040425 AGAAATACCTCCAAAGGGT 57 146040454 146040472 CTAGGATGCTCTTCTCCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG233164 ENSMUSG00000048312 ENSMUST00000108011 2 1 2 180 7 48296623 48296641 TGATAGCCGGAGAATATGG 58 48296812 48298178 ATTTGAACCACAGGAAGAC 57 NA Mus musculus 50 Cxcr6 ENSMUSG00000048521 ENSMUST00000111444,ENSMUST00000049810 2 2 2 60 9 123719713 123719731 CTCAGGCATTATCAAGACC 57 123719752 123719773 CTTTAGAGATTTGTGCTTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Klf17 ENSMUSG00000048626 ENSMUST00000062747 1 1 1 82 4 117432936 117432954 CTCTCACCTTGTGAGTCAC 59 117431846 117431864 AGAACTTCCACGTACATCC 58 NA DesignNoJunction Mus musculus 50 Nlrp10 ENSMUSG00000049709 ENSMUST00000055745 2 1 1 61 7 116070387 116070405 TGGAGCTTGTAGACTACCT 59 116069486 116069504 CTCCCGGTAGATTTCTCTG 58 NA DesignNoJunction Mus musculus 50 Mmp12 ENSMUSG00000049723 ENSMUST00000065079 2 1 2 82 9 7352976 7352996 CACCTACAGATACCTTAACCC 59 7353039 7369173 CCACATGTACATAGAGGGAC 59 NA Mus musculus 50 Lrrc19 ENSMUSG00000049799 ENSMUST00000107101,ENSMUST00000053419 1 2 2 80 4 94307654 94310004 CAAGCTTCTGAAACAGAAGTC 59 94307594 94307614 AACATTGGTACTGATACCCTC 59 NA Mus musculus 50 Usp29 ENSMUSG00000051527 ENSMUST00000108555,ENSMUST00000054055 2 2 2 177 7 6912853 6913853 TACTTCTGATTGTGCATGC 58 6913994 6914012 ACTTGAAAGAAACCACCAG 57 NA InUTR Mus musculus 50 Aldh7a1 ENSMUSG00000053644 ENSMUST00000116635,ENSMUST00000066208 2 2 2 81 18 56708109 56708127 TCTGATCACAGGGAATGTC 58 56704687 56706567 GGCTATGATCTTTGTGACAG 58 NA Mus musculus 50 Ndst1 ENSMUSG00000054008 ENSMUST00000066785,ENSMUST00000115312 1 2 3 80 18 60867303 60867322 TCCTGGTGGATATTGATGAC 58 60864805 60867260 TATCAAACAGGGCCTTCAC 59 NA Mus musculus 50 Gon4l ENSMUSG00000054199 ENSMUST00000090942 1 1 4 89 3 88691040 88691492 CTTTGTCTCATGTTCAGCTG 59 88691544 88691562 ATATTCTGGTGGTACTGGC 58 NA Mus musculus 50 Obox1 ENSMUSG00000054310 ENSMUST00000067288,ENSMUST00000108517 1 2 2 209 7 16140727 16140871 GGTTGTATGCTACTGTCAG 57 16141043 16141508 GAACCAGATCTTAATCTCCC 57 NA DesignRelaxed Mus musculus 50 Ceacam2 ENSMUSG00000054385 ENSMUST00000066503,ENSMUST00000064862 1 2 3 120 7 26313026 26323601 ATGTACACAAGCCAGTGAC 59 26312924 26312942 AAGATCCAATGGATGTGGG 59 NA Mus musculus 50 Slc8a1 ENSMUSG00000054640 ENSMUST00000086538,ENSMUST00000067792 2 2 4 85 17 81844857 81844876 CTTCATTGAGATTGGAGAGC 58 81832097 81841115 GCTTGTCATCATATTCCTCTG 58 NA Mus musculus 50 Tmem69 ENSMUSG00000055900 ENSMUST00000106477,ENSMUST00000106478,ENSMUST00000069674 1 3 3 84 4 116226322 116227380 CTTCAAAGATGCTGAAGAACC 59 116226258 116226277 TGCAGTAGACATGTCTTGAG 59 NA Mus musculus 50 Higd1c ENSMUSG00000056487 ENSMUST00000075675,ENSMUST00000108953 1 2 3 80 15 100205373 100205392 AGAAGATGTCCCTTCATCTC 58 100205435 100214166 AGAGAACACCTAGAGTCAC 57 NA Mus musculus 50 Cep110 ENSMUSG00000057110 ENSMUST00000028237,ENSMUST00000113034,ENSMUST00000113032 3 3 7 80 2 35023397 35024769 AGCAGCTACAAGGTAAACAG 59 35024812 35024830 TTGCTAGGTCCAAATGGTC 59 NA Mus musculus 50 Npm1 ENSMUSG00000057113 ENSMUST00000075641,ENSMUST00000093201 3 2 4 80 11 33054038 33054056 GTTCTCTTCCCAAAGTGGA 59 33052843 33053994 CTTGAATAGCCTCCTGGTC 59 NA Nonspecific Mus musculus 50 Mpp7 ENSMUSG00000057440 ENSMUST00000025129 1 1 2 160 18 7513050 7561731 CGACATGGGTCTGTATGAG 59 7461680 7461698 TCTGCTTCTCATAGCAGTG 59 NA Mus musculus 50 Lin9 ENSMUSG00000058729 ENSMUST00000085803,ENSMUST00000085804 2 2 2 83 1 182582090 182589204 TCCCACAGAAATTTACAGC 57 182589251 182589269 TGAGTAGGTTCCGTAATCG 58 NA Mus musculus 50 Sh2d3c ENSMUSG00000059013 ENSMUST00000074248,ENSMUST00000113242,ENSMUST00000113240 3 3 3 127 2 32600286 32600304 TACATTCTTGACTCCTCGC 59 32600395 32601368 AGAGTCTCAGAGACCTCAC 59 NA Mus musculus 50 Bcas3 ENSMUSG00000059439 ENSMUST00000108062,ENSMUST00000108061,ENSMUST00000092821 2 3 12 151 11 85615442 85627507 GGATCTGGAACAGACACAG 59 85635578 85635596 CACGCTTTGTTACTGTTGG 59 NA Mus musculus 50 Ptk2b ENSMUSG00000059456 ENSMUST00000022622,ENSMUST00000089250,ENSMUST00000111121 3 3 3 81 14 66796595 66796882 CGAACTCATTCAAGGATGG 58 66796532 66796551 TGTATCTTGACTTGTCAGCT 58 NA Mus musculus 50 4930522H14Rik ENSMUSG00000060491 ENSMUST00000102725,ENSMUST00000082306 2 2 2 122 4 109200628 109203817 GGTGTCTTTAGTCACTTAACC 58 109197047 109200546 CTCCTCAAATAGTTCTCTTCG 57 NA Mus musculus 50 Ppm1b ENSMUSG00000061130 ENSMUST00000080217 1 1 5 231 17 85402715 85404262 GGGTTGAAGAAATCATGCAG 59 85412940 85412958 AGAGCTTCCACCAATTTCC 59 NA DesignRelaxed Mus musculus 50 9330158F14Rik ENSMUSG00000061171 ENSMUST00000112419 3 1 6 80 2 65191916 65196119 CTTTCATAGTTGACCCTGGA 59 65191855 65191874 ATGGCAGAGTACATGTAACC 59 NA Mus musculus 50 Krt79 ENSMUSG00000061397 ENSMUST00000108882,ENSMUST00000023799 3 2 2 82 15 101762234 101762252 AGTCAAAGCCCAGTATGAG 58 101761969 101762191 GCAGTTCTTCATATTTGGTCTG 59 NA Mus musculus 50 Dlgap4 ENSMUSG00000061689 ENSMUST00000000094,ENSMUST00000109568,ENSMUST00000109566,ENSMUST00000099145 2 4 6 182 2 156571920 156574076 GATAGGAATACAAGTTGACTGC 58 156574742 156574760 TTACAACTGGAGTCGTTGG 59 NA Mus musculus 50 Tnnt3 ENSMUSG00000061723 ENSMUST00000105955,ENSMUST00000105952,ENSMUST00000105949,ENSMUST00000105948,ENSMUST00000105947,ENSMUST00000105944 3 6 20 179 7 149691428 149694250 CCAAGAAGAGGAGAAACCA 58 149697250 149697268 TTAAGTGCGATTAGCTCCT 58 NA Mus musculus 50 Armc9 ENSMUSG00000062590 ENSMUST00000113309 3 1 3 140 1 88153807 88153825 AGACCATCTCATTTCTCCC 58 88153927 88158623 TCCATAACTGATGAAGAGGAC 58 NA Mus musculus 50 Klk1b27 ENSMUSG00000063177 ENSMUST00000079859 3 1 1 166 7 51309867 51309888 CCAGTCTAGAATAATTGGAGGA 58 51310991 51311009 AAACATTATGCTGGCTGGT 59 NA DesignNoJunction Mus musculus 50 Ptpla ENSMUSG00000063275 ENSMUST00000114753,ENSMUST00000091429,ENSMUST00000074854,ENSMUST00000114755 2 4 4 116 2 13966851 13966869 GCTATTGCTATGGTACGCT 59 13966582 13966771 ACAATGGACTACCTCAAGC 59 NA Mus musculus 50 Olfr1410 ENSMUSG00000063583 ENSMUST00000079790 1 1 1 60 1 94504619 94504637 CTTCCTCAAGAACCTGTCC 59 94504660 94504679 GGCATTAGGGATAATGACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Chd4 ENSMUSG00000063870 ENSMUST00000112392 3 1 3 187 6 125052309 125052499 AAAGAAAGACCACCAGGAC 59 125052831 125052850 AATTGTCCTCCTTAGCTTCC 59 NA Mus musculus 50 Scn1a ENSMUSG00000064329 ENSMUST00000112366,ENSMUST00000112371,ENSMUST00000077489,ENSMUST00000094951 2 4 4 83 2 66165906 66166471 ATACCAACTGACATTGCGT 59 66165841 66165859 ATCAGGTAGAATGAGCCCA 59 NA Mus musculus 50 Hnrnpr ENSMUSG00000066037 ENSMUST00000105850,ENSMUST00000084219 2 2 3 80 4 135870103 135870121 CAAGACACTGATAGAGGCA 58 135870164 135872288 TAAGCTACCAATCCTGTCTG 58 NA Mus musculus 50 Tmem42 ENSMUSG00000066233 ENSMUST00000084733 2 1 1 65 9 122931411 122931429 TCTCGAACATACTTTGCTC 57 122931984 122932002 ATAAGATCTCCTGGCACTC 58 NA DesignNoJunction Mus musculus 50 2310001H12Rik ENSMUSG00000066613 ENSMUST00000112540,ENSMUST00000079954 2 2 3 69 5 110436275 110436293 GCTACAATTGGGAAGACAG 58 110436326 110437659 CTTTCATGCCTTCCATGTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 2310035K24Rik ENSMUSG00000068264 ENSMUST00000110210,ENSMUST00000110208,ENSMUST00000089506,ENSMUST00000110206 1 4 4 158 2 131037130 131037148 AAATCACCCGATGATCCAC 59 131038247 131038265 GTTCAGCTGAGAACTGAGG 59 NA DesignNoJunction Mus musculus 50 Arid1b ENSMUSG00000069729 ENSMUST00000092723,ENSMUST00000115799 1 2 3 91 17 5337301 5339227 AGATATTGTTACTCCCGAGG 58 5339281 5339299 TATTGATGGTGTCCAGAGC 59 NA Mus musculus 50 2610030H06Rik ENSMUSG00000073131 ENSMUST00000101496 1 1 5 73 X 69065462 69065480 ATGATCACGGTTCCTATCG 58 69081354 69081372 GAAGCCTTTGTCCTCAGAG 59 NA DesignNoJunction Mus musculus 50 Creg1 ENSMUSG00000073530 ENSMUST00000045721 1 1 2 80 1 160785164 160787274 AGCTACACAGATGATGAGTG 59 160785103 160785122 GTATACGAGGTCCAAGTAGC 59 NA Mus musculus 50 9530048O09Rik ENSMUSG00000073771 ENSMUST00000106445 3 1 2 116 4 116794019 116794038 TTATAGAAGCTCACAGCCAG 59 116793838 116793856 CTAGCTCAGTCTCATCCAC 58 NA DesignNoJunction Mus musculus 50 Etohi1 ENSMUSG00000074519 ENSMUST00000108926 2 1 3 93 2 177766063 177766082 CCTATAGGAATCTCACAGCT 57 177766346 177767514 CTTTCATGCCTTCCATGAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Ttll9 ENSMUSG00000074673 ENSMUST00000099197,ENSMUST00000103155 1 2 3 105 2 152798067 152801906 GAGAGCAGAGAACCTTAATCC 59 152801972 152808802 CATTCGCCTTCATCTTTGAC 59 NA Nonspecific Mus musculus 50 Gm904 ENSMUSG00000074902 ENSMUST00000099519 2 1 1 60 13 50738674 50738692 ATTGATCCATGGATGAGCA 58 50738716 50738734 TAAAGCCAATGGTCATGTC 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Dcdc5 ENSMUSG00000074981 ENSMUST00000099638,ENSMUST00000037284 1 2 2 64 2 106241313 106241332 GGACATGGCTTTATAACCTC 58 106244116 106244135 CGGACATAATTTGCTTTCAC 57 NA DesignNoJunction Mus musculus 50 Olfr1098 ENSMUSG00000075169 ENSMUST00000111574,ENSMUST00000099872 1 2 2 60 2 86763659 86763678 TGTAACCCTACAAATGAACC 57 86763618 86763637 GAATCTCCTTGGAATCTGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Wfdc3 ENSMUSG00000076434 ENSMUST00000109328,ENSMUST00000103096 1 2 2 112 2 164556985 164557525 GCTTTAATTCTAAACTGGAGGC 59 164556894 164556912 TGATACTCCAGGGAGTGTC 59 NA InUTR Mus musculus 50 TRBV31 ENSMUSG00000076499 ENSMUST00000103300 1 1 1 60 6 41507866 41507885 CCTAACCTCTACTGGTACTG 58 41507825 41507844 TAGAGTAGAAGAGTTGCTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV14-111 ENSMUSG00000076509 ENSMUST00000103310 1 1 1 60 6 67846480 67846501 CTAAGACCCTGATCTATTATGC 57 67846522 67846540 CCACTGAATCTTGATGGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV8-18 ENSMUSG00000076589 ENSMUST00000103390 1 1 1 60 6 70306325 70306343 GATCGATTCACAGGAAGTG 57 70306367 70306385 CATGCACATTGCTAATGGT 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Cpt1b ENSMUSG00000078937 ENSMUST00000109313,ENSMUST00000052315 2 2 2 80 15 89251176 89251194 CTACAACCCTGACGATGAG 59 89250616 89251133 TCAAACCACCTGTTATAGCA 58 NA Mus musculus 50 ENSMUSG00000068790 ENSMUSG00000079396 ENSMUST00000096172,ENSMUST00000096184 1 2 3 80 14 4136859 4136877 AAGAAGGAAGAGGGAATCC 58 4136919 4137671 AGTATTTCTAGCAGACCTGTG 59 NA Nonspecific Mus musculus 50 mmu-mir-339 ENSMUSG00000065593 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-let-7f-2 ENSMUSG00000065602 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-669a-1 ENSMUSG00000076020 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 IGLJ3P ENSMUSG00000076932 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Tmprss2 ENSMUSG00000000385 ENSMUST00000000395 2 1 1 80 16 97797870 97797888 AACGAGCTTTATGAAGCTG 58 97793641 97797827 GATGAACATGAGTCACTGTG 58 NA Mus musculus 50 Myo18a ENSMUSG00000000631 ENSMUST00000100793 2 1 10 100 11 77621361 77621379 TCTCTGACTCAGGGTACAG 59 77621442 77623319 CTTTGTCCTCCTCTTTAACC 57 NA DesignNoJunction Mus musculus 50 Pxmp4 ENSMUSG00000000876 ENSMUST00000109703 1 1 2 60 2 154421291 154421940 CAGGTACACTGTAGCTGTC 59 154421249 154421268 CATCCGTAATGAGATCTGAC 57 NA Nonspecific, DesignNoJunction Mus musculus 50 Zmat2 ENSMUSG00000001383 ENSMUST00000001419 2 1 1 80 18 36954808 36955699 GAAATGGGAGGCTACTACTG 59 36955740 36955760 CTTTCCATTAATGTGGTCCAG 58 NA Mus musculus 50 Srpk3 ENSMUSG00000002007 ENSMUST00000002081 1 1 1 80 X 71023672 71023847 CTTCAACCGTAGAGGAGAG 58 71023890 71023909 TCATACTTCTCCATGAGCAC 59 NA Mus musculus 50 Ap1m1 ENSMUSG00000003033 ENSMUST00000003117 2 1 1 90 8 74773701 74773719 TGTCATCATCTACGAGCTG 58 74773773 74774592 CTGAGTGATGTACTCCTGC 59 NA Mus musculus 50 Atp8b3 ENSMUSG00000003341 ENSMUST00000020383,ENSMUST00000060793 1 2 2 97 10 79999083 79999512 AAGACACAGAGTTCACCTG 59 79999004 79999022 GTACTTCTTCTGCCTCCAG 59 NA Mus musculus 50 Srpk1 ENSMUSG00000004865 ENSMUST00000004987 1 1 1 80 17 28739790 28740393 TTATTCAGCAAGTGCTACAG 57 28739729 28739747 TGTTCTCTGGTTTGATGTC 57 NA Mus musculus 50 AA536749 ENSMUSG00000005417 ENSMUST00000116371,ENSMUST00000108751,ENSMUST00000066330,ENSMUST00000072031,ENSMUST00000073066,ENSMUST00000108753,ENSMUST00000108750,ENSMUST00000116370 1 8 8 80 11 59582734 59582752 AGTCAGAAATCCAGTACCT 57 59582796 59583398 CATACTTCTTATCCCGCAG 57 NA Mus musculus 50 Nr2c2 ENSMUSG00000005893 ENSMUST00000113460,ENSMUST00000113463,ENSMUST00000006047 2 3 3 80 6 92089876 92099609 CGCATTCAGATTGTAACAGAC 59 92099651 92099669 TTTAGAGGATCCAGAGGCA 59 NA Mus musculus 50 Mobkl1a ENSMUSG00000006262 ENSMUST00000113229,ENSMUST00000006424 2 2 2 63 5 89182340 89185129 TTCGTTCAGGAGTTCAACC 59 89185156 89185174 TTTCAATCAGCTCTTGCAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Mpl ENSMUSG00000006389 ENSMUST00000102671,ENSMUST00000006556,ENSMUST00000106375 3 3 3 100 4 118116277 118116631 CCTAAGTCCTTCTAAGGCC 58 118116195 118116213 GAGGTAAAGGAGTGCTCTC 59 NA Mus musculus 50 Homer1 ENSMUSG00000007617 ENSMUST00000102752 3 1 10 225 13 94119179 94119197 AATTTAAGGAAGCTGCTCG 58 94126027 94126046 TTGAATGTGTACCTATGTGG 57 NA DesignNoJunction Mus musculus 50 Dio2 ENSMUSG00000007682 ENSMUST00000082432 2 1 1 75 12 91968429 91976520 CTAGATGCCTACAAACAGGT 59 91968373 91968391 ATTCAGGATTGGAGACGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zmynd10 ENSMUSG00000010044 ENSMUST00000010188 2 1 1 92 9 107452657 107452675 AATCTTGCCGATCTGAAGG 59 107452729 107452837 TTCTGGGATCTGTTCTAACAC 59 NA Mus musculus 50 H2afy ENSMUSG00000015937 ENSMUST00000016081,ENSMUST00000045788,ENSMUST00000099477 2 3 3 84 13 56206307 56206325 AAGAGACAACAAGAAGGGA 58 56205852 56206259 CTTTAGCAGCTGGTTTAGC 58 NA Mus musculus 50 Gtf2ird2 ENSMUSG00000015942 ENSMUST00000016086 2 1 1 80 5 134684805 134687079 AATGGAAGGAAATGCAAGTC 58 134687122 134687140 ACTGTCACCTGTATGATCC 58 NA Mus musculus 50 Lonrf3 ENSMUSG00000016239 ENSMUST00000115255,ENSMUST00000016383 3 2 2 81 X 33896136 33896156 TTCGGAGATGTATTGAGACAG 59 33896197 33897498 CAGCCATATTCTACAAACCCT 59 NA Mus musculus 50 E2f3 ENSMUSG00000016477 ENSMUST00000091673 3 1 2 190 13 30012088 30012379 CTAACACTACAGGCAAAGC 58 30010598 30010616 ATGAACTTCTTGGTGAGCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Mrps18c ENSMUSG00000016833 ENSMUST00000016977 3 1 2 109 5 101232121 101232998 ACATAACAGGTCTTTGTGG 57 101233372 101233391 TTTGAGATATGCAGGATCCT 58 NA Mus musculus 50 Plxdc1 ENSMUSG00000017417 ENSMUST00000107565,ENSMUST00000017561 1 2 3 81 11 97789779 97793534 CCTCACCACAGAAGATGAC 59 97787256 97787274 CTTGGACTTCGGAGATGAG 59 NA Mus musculus 50 Sept8 ENSMUSG00000018398 ENSMUST00000108987,ENSMUST00000018542,ENSMUST00000108984 3 3 3 80 11 53348118 53348458 ATAAGGATGACAGTTACAGGC 59 53348500 53348518 GGATCTTCAACTCCTCCTG 59 NA Mus musculus 50 Mpdu1 ENSMUSG00000018761 ENSMUST00000094073,ENSMUST00000018905 2 2 3 62 11 69470955 69470973 AGTGTTTATGCTGTTTGGG 58 69470820 69470929 TCTCCAGTTTCCTGAACAG 58 NA DesignRelaxed Mus musculus 50 Ict1 ENSMUSG00000018858 ENSMUST00000106539 2 1 3 122 11 115265201 115265219 CGTTCCAGAGCATCTACAG 59 115267895 115271385 CCTTGGAATTCACCAGAGG 59 NA Mus musculus 50 E2f2 ENSMUSG00000018983 ENSMUST00000061721 2 1 1 88 4 135736420 135736438 TCTATGACATCACCAACGT 58 135736490 135737216 AAATAGTTCCCTGCCTACC 58 NA Mus musculus 50 Rps6kl1 ENSMUSG00000019235 ENSMUST00000085176 2 1 2 168 12 86481420 86487824 ATCATCAAGAAGAGCCTCC 58 86480595 86480613 GTAGATGTGACCAAAGGGT 58 NA Mus musculus 50 Prl8a1 ENSMUSG00000019756 ENSMUST00000006664,ENSMUST00000095926 2 2 2 84 13 27670519 27671513 CAAGAGTTTCTCCACAATGAG 58 27668834 27668852 TGAGAACAAGCTGATCCTG 59 NA Mus musculus 50 Frk ENSMUSG00000019779 ENSMUST00000019913 2 1 1 88 10 34303788 34303807 CAACCCTGAATGAATTCGTG 59 34303856 34305980 TACCTGGATCTTTAAGCATGG 59 NA Mus musculus 50 Lims1 ENSMUSG00000019920 ENSMUST00000020078,ENSMUST00000020077,ENSMUST00000105468 2 3 3 80 10 57879418 57881153 ATAGAAGGTGATGTGGTCTC 58 57881196 57881214 GAGTTTGGTATTGCAGGTG 58 NA Mus musculus 50 Pah ENSMUSG00000020051 ENSMUST00000020241 1 1 1 80 10 87041039 87041060 AGGAAGGAGATTCTATAAAGGC 59 87041098 87041616 GCTTGTCTGATAAACAGTACTG 59 NA Mus musculus 50 1200002N14Rik ENSMUSG00000020057 ENSMUST00000020249 1 1 1 97 10 87799725 87803274 CAACTTCCAGGAGTTAGCC 59 87799646 87799664 AGATGATCGATTGCAGGAG 59 NA Mus musculus 50 Nsg2 ENSMUSG00000020297 ENSMUST00000020537,ENSMUST00000093219,ENSMUST00000109409 2 3 3 204 11 31900555 31900573 ATATTGGCTTGACTCTGCT 58 31901875 31917663 TCTTCACGATCACCTTCTC 58 NA DesignRelaxed, InUTR Mus musculus 50 Ogdh ENSMUSG00000020456 ENSMUST00000003461,ENSMUST00000109797,ENSMUST00000079291,ENSMUST00000101554,ENSMUST00000093350,ENSMUST00000101555,ENSMUST00000081894 2 7 7 84 11 6197127 6197145 TCTTAGTGGGACTAGTTCG 57 6197192 6213799 GTCCCATGACTTATGTACAC 57 NA Mus musculus 50 Pold2 ENSMUSG00000020471 ENSMUST00000102922 3 1 1 82 11 5774371 5774389 GTTTCAGGTTGAAGACCAC 58 5774215 5774326 GTAGCACAAATCTGTCTGTG 58 NA Mus musculus 50 Sap30l ENSMUSG00000020519 ENSMUST00000020826 1 1 1 104 11 57619578 57619596 AAATTTCATCCAGAGCGTC 58 57619664 57621539 TGGAACAGATCAACCTCAG 58 NA Mus musculus 50 Sntg2 ENSMUSG00000020672 ENSMUST00000021004 1 1 1 80 12 30880505 30886151 GGTAAGACAAAGAACGTACTC 58 30880445 30880463 CTTTACTCGAGTCTTCCCA 58 NA Mus musculus 50 Galk1 ENSMUSG00000020766 ENSMUST00000021114 2 1 1 64 11 115870395 115870413 GAGACTACAAGGCCTTTGG 59 115870267 115870368 CTCATAGTCATCCCTGAGTG 58 NA DesignRelaxed Mus musculus 50 2310004I24Rik ENSMUSG00000020910 ENSMUST00000072719,ENSMUST00000116364,ENSMUST00000116363 3 3 3 96 11 66851937 66853728 GATTGTGAGCCATCTTCCT 59 66851859 66851880 CTTGTGAGACCATATGATTGAC 58 NA Mus musculus 50 Serpina3n ENSMUSG00000021091 ENSMUST00000021506 3 1 1 82 12 105649603 105650556 AAACCCAGGATGATAGATGAG 58 105650599 105650618 AGCTTTGAAAGGACATCCTC 59 NA Mus musculus 50 Isca2 ENSMUSG00000021241 ENSMUST00000021667 1 1 1 121 12 86114747 86114765 TTCTGGAAATCACCGAAGG 59 86114850 86115502 TTCAAATACCCTGTCGTCG 59 NA Mus musculus 50 Wars ENSMUSG00000021266 ENSMUST00000109848,ENSMUST00000078788 2 2 2 83 12 110119307 110119325 TAAACCGAATAGAGCGAGC 59 110113985 110119261 GATTCATATCTCGGTGGGAG 59 NA Mus musculus 50 Psmc6 ENSMUSG00000021832 ENSMUST00000022380 3 1 1 87 14 45950576 45950671 GTTGGACAGATTGTAGGTG 57 45951601 45951619 CTACAACGTATCTTGGTCC 57 NA Mus musculus 50 Mettl6 ENSMUSG00000021891 ENSMUST00000055303 3 1 2 124 14 32300919 32305517 CTACGTGAAGCAACATCCT 59 32300813 32300832 CAAAGATCAATGTAACGGCA 58 NA Mus musculus 50 Prkcd ENSMUSG00000021948 ENSMUST00000022521,ENSMUST00000112211,ENSMUST00000112210,ENSMUST00000112208,ENSMUST00000112207,ENSMUST00000112206,ENSMUST00000112203,ENSMUST00000112202,ENSMUST00000112204 2 9 9 82 14 31419053 31419072 TCCACAAGAAATGCATTGAC 59 31418744 31419010 TTCTTTCTGGAAGATGGTGTC 59 NA Mus musculus 50 Trim35 ENSMUSG00000022043 ENSMUST00000022623,ENSMUST00000111119 2 2 2 93 14 66923059 66925868 TGACCTTCCTCATGAAACAC 59 66926687 66926705 CATGCATCCATTAGCAAGC 59 NA Mus musculus 50 Ppp3cc ENSMUSG00000022092 ENSMUST00000078434,ENSMUST00000022685 3 2 2 81 14 70656216 70656234 ATTGTTTCTGCTTCGAGGA 59 70647513 70656173 ATACTTGATCCGACATTCCTG 59 NA Mus musculus 50 Rb1 ENSMUSG00000022105 ENSMUST00000022701 3 1 1 80 14 73616519 73616537 CTGATAACCTTGAACCTGC 58 73612923 73616478 GAGGAGAAAGATACATATCTGC 57 NA Mus musculus 50 Cdh10 ENSMUSG00000022321 ENSMUST00000040562 3 1 1 80 15 18940854 18942958 ATTCTGCTGGTTATAGTAGTCC 59 18942997 18943017 GTCCTCCTTGGATAGAATCAG 59 NA Mus musculus 50 Derl1 ENSMUSG00000022365 ENSMUST00000022993 2 1 1 102 15 57710621 57711563 TGCATCGTTATTACTGGCT 59 57710069 57710087 CGATCAGGTCTCTGTTCAG 59 NA Mus musculus 50 D15Wsu75e ENSMUSG00000022472 ENSMUST00000023110,ENSMUST00000100399 1 2 3 100 15 81846351 81846369 GAAGCTCTACGTGTACGAC 59 81833024 81834190 CAACTATAGAGGTGTGCCAG 59 NA Mus musculus 50 Ppp1r1a ENSMUSG00000022490 ENSMUST00000023133 3 1 1 97 15 103363522 103363895 TTCTCAAGTCCACCTTGTC 59 103362887 103362905 GTGATGTTCAACCATCGTC 58 NA Mus musculus 50 Atp13a3 ENSMUSG00000022533 ENSMUST00000061350 2 1 1 80 16 30337677 30338528 AACCTTATCAGGGAAGGTC 58 30337615 30337634 CTGGATGATGCTGTATAACG 58 NA Mus musculus 50 St3gal6 ENSMUSG00000022747 ENSMUST00000064549,ENSMUST00000114357,ENSMUST00000114358 1 3 3 80 16 58486556 58486575 CTTTATAAAGGTTGCTGCCA 58 58484927 58486515 CTGAAATATGTCTCGAAGGTC 58 NA Mus musculus 50 Gsk3b ENSMUSG00000022812 ENSMUST00000023507,ENSMUST00000114750 1 2 2 80 16 38144528 38170756 AAGCGATTTAAGAACCGAG 57 38170799 38170818 GTAGAAGAAATACCGCAGTC 58 NA Mus musculus 50 Adcy5 ENSMUSG00000022840 ENSMUST00000114913,ENSMUST00000023549 1 2 2 81 16 35298628 35298646 CTAGAGGCCAACAATGAGG 59 35298690 35299551 CCTCACTGATGATCTCATCG 59 NA Mus musculus 50 Pcdhgc5 ENSMUSG00000023036 ENSMUST00000061279 1 1 9 121 18 37918009 37984680 GACAGATATTCAGCAAGCC 58 37992950 37992968 TATCAAACTGGTTGTTGGG 57 NA DesignNoJunction Mus musculus 50 Rttn ENSMUSG00000023066 ENSMUST00000023828 3 1 1 80 18 89141883 89141904 GAATGGTTCAATTTCCCATCTG 59 89141944 89142921 GGCTGGAGAATACTTAACCA 59 NA Mus musculus 50 Ssxb2 ENSMUSG00000023165 ENSMUST00000023931,ENSMUST00000103000 2 2 2 101 X 8032158 8035256 ACAGTGATGAAACTAGTGGC 59 8032076 8032097 CCTCTTCAGGATCACTAATCTC 59 NA Mus musculus 50 Cpn2 ENSMUSG00000023176 ENSMUST00000064856 3 1 1 60 16 30259745 30259764 CATCTGTCCTATCTCACCAG 58 30259704 30259722 TATGGGTGTTGGAGATCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnk5 ENSMUSG00000023243 ENSMUST00000024011 2 1 1 61 14 20964331 20965727 CATCGGTTATGGCAATGTG 59 20964288 20964307 CGTAGAAGACACAGAAGAGG 59 NA DesignNoJunction Mus musculus 50 Pla2g7 ENSMUSG00000023913 ENSMUST00000024706,ENSMUST00000097322 1 2 2 80 17 43739824 43739842 TGACATTGAACATGGAGAC 57 43739885 43741519 TCATCAATAGCATCCTTCAG 57 NA Mus musculus 50 Lhcgr ENSMUSG00000024107 ENSMUST00000024916 3 1 1 83 17 89169227 89169245 CTCTCAGAGTGATTCCCTG 58 89166653 89169183 GTGTTCTGGATCAGTATTTCAG 58 NA Mus musculus 50 Zfp523 ENSMUSG00000024220 ENSMUST00000116628,ENSMUST00000073534,ENSMUST00000002318 2 3 3 85 17 28340126 28340145 TGAAGAACTAGCCACATCTG 59 28340193 28341415 AGGTAATGATTGTGACGGG 59 NA Mus musculus 50 Hspa9 ENSMUSG00000024359 ENSMUST00000025217 3 1 1 88 18 35099079 35099858 GCAACAGATTGTAATCCAGTC 59 35099011 35099029 CTTCCTCAGCGTACTTCTC 59 NA Mus musculus 50 Camk2a ENSMUSG00000024617 ENSMUST00000102888 1 1 3 88 18 61119662 61119680 CATCCTCACCACTATGCTG 59 61123608 61129657 CAGAAGATTCCTTCACACCA 59 NA Mus musculus 50 Gna14 ENSMUSG00000024697 ENSMUST00000025602 3 1 1 81 19 16679569 16682477 AGTGTGACAATGAGAACCG 59 16682522 16682540 GAGGAGTTCAGAAACCAGG 59 NA Mus musculus 50 Fundc1 ENSMUSG00000025040 ENSMUST00000026016 1 1 1 62 X 17135832 17135850 GAGCAAATAAAGCAGCACC 59 17135119 17135807 GCTTGATAAAGTCTGTTGCT 58 NA DesignNoJunction Mus musculus 50 Apex2 ENSMUSG00000025269 ENSMUST00000112725,ENSMUST00000112727,ENSMUST00000112720,ENSMUST00000112721,ENSMUST00000026303,ENSMUST00000112719 2 6 6 125 X 147019838 147019856 ATCAATGTGTACTGCCCTC 59 147019065 147019749 GATTATCACGTGACTGCCA 59 NA Mus musculus 50 Bet1l ENSMUSG00000025484 ENSMUST00000026557 2 1 1 60 7 148040711 148040981 CTTAAATCGCTGGCTTTGG 59 148040669 148040687 CGTCTAAGTAACGGTTCTG 57 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 Muc2 ENSMUSG00000025515 ENSMUST00000026590 2 1 1 80 7 148887324 148887342 GCTATATTGAGGACACTCG 57 148887385 148888016 TGTTGGTGCATGTATAAGAC 57 NA Mus musculus 50 D11Bwg0517e ENSMUSG00000025576 ENSMUST00000106278,ENSMUST00000103023 2 2 5 99 11 118358283 118358301 AATACATTTCGAGCTGCAC 58 118356587 118357675 CATAGCCTCCATAAATCTCAG 57 NA Mus musculus 50 Wdr73 ENSMUSG00000025722 ENSMUST00000026816 1 1 1 102 7 88043399 88043417 TTTGACCTAAAGCATGTGC 58 88038691 88042818 CAATGACATCGTTGTCCTC 58 NA Mus musculus 50 Nmb ENSMUSG00000025723 ENSMUST00000026817 3 1 1 76 7 88049040 88049059 TCTAGGCATGAACTTCAGTG 59 88047353 88047371 ATCACTTCTGCAGTAGTGG 58 NA DesignNoJunction Mus musculus 50 Ogfrl1 ENSMUSG00000026158 ENSMUST00000027343 1 1 1 81 1 23377280 23382582 CAACATCTTAATGAGTCTCAGC 59 23377220 23377238 AACTCTCGTATCCAAGCTC 58 NA Mus musculus 50 Sp100 ENSMUSG00000026222 ENSMUST00000066427,ENSMUST00000027424,ENSMUST00000097667,ENSMUST00000054279 3 4 4 80 1 87566642 87570203 CCTCAGAATGAAGAAAGAGC 58 87570244 87570264 CTTTACATCTACCAGTTGCAC 58 NA Mus musculus 50 Tor1aip1 ENSMUSG00000026466 ENSMUST00000097528,ENSMUST00000027738,ENSMUST00000097527 1 3 3 80 1 157869502 157870288 TTCGAAGAAGGAGAAACCG 59 157869440 157869458 AAGAGAATCGCTGGATCTG 59 NA Mus musculus 50 Efcab2 ENSMUSG00000026495 ENSMUST00000027775 1 1 1 84 1 180406009 180411448 CATGACTGAGGAAGGTGAG 59 180411496 180411514 AATGGTGTTTGATTCGGGA 59 NA Mus musculus 50 Ddr2 ENSMUSG00000026674 ENSMUST00000027985 3 1 1 82 1 171934836 171934854 TTATCCCAGTCACTGACCA 59 171934387 171934790 GGATACCAAGCCATCTAGC 59 NA Mus musculus 50 Rabgap1l ENSMUSG00000026721 ENSMUST00000086099 1 1 5 103 1 162237380 162237398 TTATGGTAGCCTATGACGC 58 162187655 162237313 TTTGGTTGGTACCATGGAC 59 NA Mus musculus 50 Dpm2 ENSMUSG00000026810 ENSMUST00000028151 3 1 1 88 2 32427842 32427860 TCCACAAATACTTCCTGCC 59 32427909 32428489 GATGAACAATCCCACAAATAGG 59 NA Mus musculus 50 March7 ENSMUSG00000026977 ENSMUST00000102748,ENSMUST00000067542,ENSMUST00000102747 1 3 3 80 2 60067927 60070267 ACAGTGTCAGATTCTTCTTGG 59 60070307 60070327 CAAGTCTGTTCCAAATGAACC 59 NA Mus musculus 50 B230118H07Rik ENSMUSG00000027165 ENSMUST00000111231,ENSMUST00000090513 1 2 2 88 2 101402502 101416177 ACCGAAGAGATACTTGGAG 58 101402432 101402452 GTAAACTTAGGAGTGAGAGTC 57 NA Mus musculus 50 Slc12a1 ENSMUSG00000027202 ENSMUST00000110495,ENSMUST00000110494,ENSMUST00000028630 2 3 3 81 2 125016073 125019870 AGAAGCCAGATGTGAACTG 59 125019915 125019933 GTGGTTAATTCCAGAGCGT 59 NA Mus musculus 50 Polr3f ENSMUSG00000027427 ENSMUST00000028914,ENSMUST00000110017 3 2 2 82 2 144354542 144358093 AGACTGTTATCCATGGGTC 58 144358139 144358157 CCAGCATTCTGAGAATCCT 59 NA Mus musculus 50 Gfm1 ENSMUSG00000027774 ENSMUST00000077271 1 1 1 80 3 67244104 67244123 TTGCTAACTCAGATGAGCAG 59 67244166 67247486 GGATTGCTCGCTTTAAGTC 58 NA Mus musculus 50 Arl14 ENSMUSG00000027783 ENSMUST00000029354 3 1 1 64 3 69026950 69026971 CAGGAAATTAACCGAGTTTCTG 59 69026996 69027014 GCTTGAAGATTGCTAAGGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gm414 ENSMUSG00000027788 ENSMUST00000053013 2 1 1 110 3 69827221 69830508 AGAGAAAGGACTAAAGGGAG 58 69831161 69831179 GTTCCTTTATCTCCCTTGG 57 NA Mus musculus 50 Eif2a ENSMUSG00000027810 ENSMUST00000029387 3 1 1 81 3 58348979 58349156 CAACCTTATAAGGTGGCAG 57 58349198 58349219 CAAAGTTGGGATACTGATACAG 58 NA Mus musculus 50 Veph1 ENSMUSG00000027831 ENSMUST00000029419,ENSMUST00000107837 1 2 2 86 3 65865034 65865053 GAAGTTCATCAAGAGGTGGA 59 65861253 65864986 GGGTCATCCTTAGATTTCCC 59 NA Mus musculus 50 Pmvk ENSMUSG00000027952 ENSMUST00000107408 2 1 2 132 3 89263798 89265811 TTCTATGCCAGACTTGGAG 58 89268257 89268275 GATAGGTCTCCTTGTAGGT 57 NA DesignNoJunction Mus musculus 50 Ctsk ENSMUSG00000028111 ENSMUST00000015664 1 1 1 85 3 95305316 95305334 AATCTCTGCCCATAACCTG 59 95305383 95305482 CTTCACTGGTCATGTCTCC 59 NA Mus musculus 50 Oaz3 ENSMUSG00000028141 ENSMUST00000029787 3 1 1 80 3 94239062 94239889 GAACTCTATTCAGCTGGGA 58 94239000 94239019 GTGGAAGTCTAACTGAACTG 57 NA Mus musculus 50 Spaca1 ENSMUSG00000028264 ENSMUST00000084734,ENSMUST00000029927 3 2 3 93 4 34127842 34127863 GATAGTGCTAGACTATCATGTG 57 34126344 34127790 GTATAACAGGTTGTTGGTCTG 58 NA Mus musculus 50 Casp8ap2 ENSMUSG00000028282 ENSMUST00000108177,ENSMUST00000029950,ENSMUST00000108178 1 3 3 90 4 32717213 32718051 CTGTTTCTGACAGTACTGCT 59 32718104 32718122 TTCGCAGTTCCTTCTTCAG 59 NA Mus musculus 50 Mpdz ENSMUSG00000028402 ENSMUST00000070461 2 1 4 165 4 80925672 80927621 AAACAGTGTTTGCAAAGGG 59 80925524 80925545 ACTTCAAGAGAAACCATGAGG 59 NA Mus musculus 50 4930417M19Rik ENSMUSG00000028457 ENSMUST00000107942,ENSMUST00000056010,ENSMUST00000107937,ENSMUST00000102953,ENSMUST00000107940 1 5 5 80 4 43317623 43318608 GCTCTTCCTACAGTTGGTC 59 43318651 43318670 ATGGATAGCACCACAATCAG 59 NA Mus musculus 50 Wasf2 ENSMUSG00000028868 ENSMUST00000084241,ENSMUST00000097853,ENSMUST00000105912 1 3 3 80 4 132741011 132741526 AGAAGAAGTGTCACTACAAGG 59 132741568 132741586 CTGTCAAAGAGCTTCTGGT 59 NA Mus musculus 50 Errfi1 ENSMUSG00000028967 ENSMUST00000073600,ENSMUST00000030811 3 2 2 83 4 150239536 150240430 CCTAACAACTGTTGGATGTG 58 150240476 150240494 CTTGACCTTGGAGATGGAC 59 NA Mus musculus 50 Plch2 ENSMUSG00000029055 ENSMUST00000105631,ENSMUST00000030929,ENSMUST00000105630 2 3 3 60 4 154373126 154374188 CTTCATCAAGAATGAGTACCC 58 154373086 154373104 CTGAACAACACTACAGTGG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Dmp1 ENSMUSG00000029307 ENSMUST00000066708 3 1 1 94 5 104636611 104636630 TGCCAGATACCACAATACTG 59 104638947 104639136 CTGATGACTCACTGTTCGT 59 NA Mus musculus 50 B3gnt4 ENSMUSG00000029431 ENSMUST00000031384 1 1 1 60 5 123960747 123960765 AGTTGTTAACACCTCCCTG 59 123960787 123960807 GTGTCGATAGGTTAAGAAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rhof ENSMUSG00000029449 ENSMUST00000031401 2 1 1 139 5 123570433 123570531 GTCCTCATCAAGTGGTTCC 59 123570312 123570330 TAGGTAATAGGCTCCAGCT 59 NA Mus musculus 50 Cpsf4 ENSMUSG00000029625 ENSMUST00000110646,ENSMUST00000110642 1 2 3 65 5 145934283 145934302 TATGACATGACCAAGATGCC 59 145936427 145936445 CTCCTTATTGCTGCATTCC 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Slc13a1 ENSMUSG00000029700 ENSMUST00000031713,ENSMUST00000115350 2 2 2 85 6 24058256 24067935 CATTTCAATACGCGCTACC 59 24058189 24058208 AGAAGAATTAGAGCAACCGG 59 NA Mus musculus 50 Zkscan1 ENSMUSG00000029729 ENSMUST00000066617,ENSMUST00000019660,ENSMUST00000110963,ENSMUST00000110962 2 4 4 60 5 138535345 138535363 GAAGCCTCGTCTCTTATCC 59 138541836 138541855 CTTTGAGGTTGACTCATTCC 58 NA DesignNoJunction Mus musculus 50 2810007J24Rik ENSMUSG00000030378 ENSMUST00000063509 2 1 1 155 7 15010822 15010840 TCTACAATTGCCAATGAGC 58 15008901 15010704 GAGATAAATCACCTTTGCCT 57 NA Mus musculus 50 Sema4b ENSMUSG00000030539 ENSMUST00000032754 1 1 1 60 7 87368858 87368876 AACTCTGCAAGAATTCCTC 57 87368900 87369497 TGTTTACATGGCTTACCTG 57 NA DesignRelaxed Mus musculus 50 Acan ENSMUSG00000030607 ENSMUST00000032835 1 1 1 80 7 86227086 86227107 CACTTTACTCTTGGTCTTTGTG 59 86227148 86229368 AGTGAGTTGTCATGGTCTG 59 NA Mus musculus 50 Calca ENSMUSG00000030669 ENSMUST00000032906,ENSMUST00000032907 1 2 2 91 7 121778112 121778648 CCTTTGAGGTCAATCTTGG 58 121778039 121778057 ATATAGTCCTGCACCAGTG 58 NA Mus musculus 50 Pak1 ENSMUSG00000030774 ENSMUST00000033040 3 1 1 82 7 105047135 105048855 ACTACCTGGACAGTTACCT 59 105048901 105048919 CACCACATCTGTCAAGGAG 59 NA Mus musculus 50 Rbm10 ENSMUSG00000031060 ENSMUST00000115375,ENSMUST00000115374,ENSMUST00000115376,ENSMUST00000084383 2 4 4 60 X 20219943 20221802 GGCTGTGTAATAAGTGTGG 58 20221825 20221844 CCACATTTGAAGCACTTCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Dynlt3 ENSMUSG00000031176 ENSMUST00000033519 1 1 1 84 X 9233179 9233514 CATCTGATGGAACCTGTACC 59 9233114 9233132 TACAGGACAATCGCAACTG 59 NA Mus musculus 50 Cox7b ENSMUSG00000031231 ENSMUST00000033582 2 1 1 60 X 103214992 103215011 AATGCTATATTAGCAGGTGG 57 103215034 103217094 GTGTGGCTGTATATGTCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Arhgap6 ENSMUSG00000031355 ENSMUST00000112129 3 1 6 172 X 165694558 165695591 CAACACTCTCCTGTTGGAG 59 165695725 165695745 TATAGCAGCATACCTCTTGTC 59 NA Mus musculus 50 1700018L24Rik ENSMUSG00000031512 ENSMUST00000033909 3 1 1 91 8 11844183 11844201 CTACAATGTCACCAGGGAG 59 11844254 11853136 CCTGTACATAAATGGGAACAG 58 NA Mus musculus 50 Hpgd ENSMUSG00000031613 ENSMUST00000034026 1 1 1 103 8 58777174 58777192 ACCATTTCGGAAGATTGGA 58 58777259 58786408 CCCACTGATAACAGAAACC 57 NA DesignNoJunction Mus musculus 50 Isx ENSMUSG00000031621 ENSMUST00000034034 2 1 1 84 8 77413939 77413957 CTTCACCCATTACCCTGAC 59 77414004 77415706 GAACCAGATCTGTACTCGAG 59 NA Mus musculus 50 BC025816 ENSMUSG00000031828 ENSMUST00000034287 1 1 1 124 8 122394578 122398278 AAACAGTGGATCAAGGTGG 59 122398366 122398384 GTCTCTACAGAAGACAGCG 59 NA Mus musculus 50 Tsnaxip1 ENSMUSG00000031893 ENSMUST00000034365 3 1 1 80 8 108366440 108366583 GATGGGAAAGAATTTGGAGAG 58 108366625 108366643 TCAACACTTAGCAACTCCT 58 NA Mus musculus 50 Hephl1 ENSMUSG00000031936 ENSMUST00000034412 1 1 1 80 9 14884660 14886275 GGACACAGAAAGGAATAGAC 57 14884599 14884618 TTTCATCAAGATAGCTGCTG 57 NA Mus musculus 50 Pvrl1 ENSMUSG00000032012 ENSMUST00000034510 3 1 1 157 9 43600639 43602181 ACTGGACCACATTGAATGG 59 43602302 43602320 GATATTGACCTCCACCTGG 59 NA Mus musculus 50 Mcam ENSMUSG00000032135 ENSMUST00000034650,ENSMUST00000098852 1 2 2 95 9 43945381 43946929 GGAGAACCGAGTTCATATCC 59 43946987 43947005 TCTTCCTTAACTAGGCGTG 58 NA Mus musculus 50 Ilf3 ENSMUSG00000032178 ENSMUST00000067646,ENSMUST00000115414,ENSMUST00000115413 2 3 3 81 9 21193856 21193874 CTGCTCTGTAAGGAGAAGC 59 21193918 21196748 CTGTTACAGTAGTGAGCTGG 59 NA Mus musculus 50 Rora ENSMUSG00000032238 ENSMUST00000064920 1 1 3 132 9 68501779 68511172 GGTGACTTTATAATCTCTAGGC 57 68511653 68511671 AGTTGAGGATCACATCTGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Ihpk2 ENSMUSG00000032599 ENSMUST00000035219 3 1 3 64 9 108698672 108698690 TCAGTTCTACGAGACCCTC 59 108698718 108699546 GGCTTTGTCCTTTGTACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 A130042E20Rik ENSMUSG00000033126 ENSMUST00000049185 3 1 1 60 10 75929097 75930906 ATGAGAATCTGAAAGCTGG 57 75929055 75929074 CCCAGATTATAATCATCCGG 57 NA DesignNoJunction Mus musculus 50 Slc22a15 ENSMUSG00000033147 ENSMUST00000106928 2 1 1 73 3 101679648 101681803 AACCAAAGATGGTTTGGTC 58 101679593 101679611 ACAATAAGACAGGCCAGTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 1810031K17Rik ENSMUSG00000033159 ENSMUST00000041213,ENSMUST00000097695 1 2 2 80 1 75137518 75137537 GACTCTATTATGGCTGGGAC 59 75136462 75137475 GTTCCACAGTAATGTCTGC 58 NA Mus musculus 50 Otud7a ENSMUSG00000033510 ENSMUST00000058476 3 1 1 163 7 70880825 70899526 AGAGAACAAGCTGTGATCC 59 70899822 70899840 TGTAGAAGGTTCAGCTTGG 59 NA Mus musculus 50 Ndn ENSMUSG00000033585 ENSMUST00000038775 1 1 1 60 7 69494074 69494092 GAGTACGAGTTCTTCTGGG 59 69494116 69494134 CCATGATCTGCATCTTGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rbm34 ENSMUSG00000033931 ENSMUST00000045994 2 1 1 88 8 129473432 129474607 TCTTTGAGAACACAGATGCT 59 129473363 129473381 AACAGAACGCATGACTCTC 59 NA Mus musculus 50 Rfc3 ENSMUSG00000033970 ENSMUST00000038131 3 1 1 82 5 152448271 152450029 CAAAGAGACTTCAAAGTGGT 57 152448208 152448226 TCCATAGTTCTGCGTAAGG 58 NA Mus musculus 50 Kctd7 ENSMUSG00000034110 ENSMUST00000040616 1 1 1 80 5 130624029 130624047 CGGCATTACATCCCTACAG 59 130624091 130627556 GAAGTTCAGCACATCTCCA 59 NA Mus musculus 50 6430527G18Rik ENSMUSG00000034168 ENSMUST00000038422 1 1 1 60 12 88223576 88223594 ACAGATGTACCAGGATTGC 59 88223534 88223552 GTACTTGAAGCCAGAGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bmp2k ENSMUSG00000034663 ENSMUST00000035635,ENSMUST00000112974 1 2 2 81 5 97474115 97474133 TTGCTATCTGTGATGGCAG 59 97474177 97482125 AGCATGAACCTAATCAAGCA 59 NA Mus musculus 50 Rnps1 ENSMUSG00000034681 ENSMUST00000058094 3 1 3 109 17 24557337 24558706 CTCCAAATCCAAACCACCT 59 24558781 24559098 GATCCTCTGTGGTTATTCCTG 59 NA Mus musculus 50 Neurod1 ENSMUSG00000034701 ENSMUST00000088056 1 1 2 73 2 79294401 79294777 ATAGAGACACTGACTGCAC 58 79294346 79294364 GAAGTTGCCATTGATGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tbr1 ENSMUSG00000035033 ENSMUST00000048934,ENSMUST00000102737 2 2 2 117 2 61645387 61645405 GAAGTGAATGAGGATGGCA 59 61645483 61646565 GTTGTGTAATATCCGTGTTCTG 59 NA Mus musculus 50 Ndufa3 ENSMUSG00000035674 ENSMUST00000039415 1 1 2 60 7 3569397 3569415 ACATTACTGTCGCTCTTCC 59 3569436 3569457 GAGTCAAACTGAGTTGAATGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Prtg ENSMUSG00000036030 ENSMUST00000055535 2 1 1 80 9 72739735 72739754 ATTAACTACACCATCCGCTG 59 72739797 72740047 GTGGGTTTCTGATGTTTGC 59 NA Mus musculus 50 AW061290 ENSMUSG00000036368 ENSMUST00000040368,ENSMUST00000112443 1 2 2 80 17 80049804 80051045 CCACAAGGAGAAGTTTAGTG 58 80051085 80051106 GTGGATAGATCATACATGTCTC 57 NA Mus musculus 50 Mgat4b ENSMUSG00000036620 ENSMUST00000041725 3 1 1 83 11 50046108 50046126 ATGAAGAACTTTGCCCTCC 59 50046172 50046457 GAACATCTTCCCAATGAAGC 59 NA Mus musculus 50 Il22ra1 ENSMUSG00000037157 ENSMUST00000102546 1 1 1 95 4 135290112 135290130 TTTACTACGCCAAGGTCAC 59 135290189 135293266 GTTTGATGGTAGTGTGCTG 58 NA Mus musculus 50 Rbm17 ENSMUSG00000037197 ENSMUST00000040314 3 1 1 92 2 11507346 11507469 CAATTAAAGCTGTGGTGGA 57 11507272 11507291 CCAAGACCCTGAATTTATCC 57 NA Mus musculus 50 Itih2 ENSMUSG00000037254 ENSMUST00000042290 3 1 1 81 2 10045135 10047789 CAACTTCACCATGACTGTG 58 10045072 10045090 CTGTGAATAAAGAGCTCGG 57 NA Mus musculus 50 Utx ENSMUSG00000037369 ENSMUST00000044484,ENSMUST00000052368 3 2 2 80 X 17818885 17818907 CTATTCAGTATCTCCAGAAGTCC 59 17818946 17823102 TTGAATAGCACCTTCCAAGG 59 NA Mus musculus 50 Adam32 ENSMUSG00000037437 ENSMUST00000041257,ENSMUST00000110649 3 2 2 83 8 25983227 25989204 CTGTGGATGGAGGAATCTC 59 25983162 25983180 GTACTGTTATTGGGTGGGT 58 NA Mus musculus 50 Inf2 ENSMUSG00000037679 ENSMUST00000101029,ENSMUST00000039111 1 2 2 80 12 113844549 113845193 AAGCATGAGATTGAGAACC 57 113845237 113845255 GAGCAGAACATAGAACTGG 57 NA Mus musculus 50 3110032G18Rik ENSMUSG00000037962 ENSMUST00000036109 2 1 1 156 5 125490745 125490763 CCTTCCCTCTTCCAAACTC 59 125491672 125491691 TCTTGTCTCGGAAGTATCTC 58 NA DesignNoJunction Mus musculus 50 Slc24a2 ENSMUSG00000037996 ENSMUST00000107158,ENSMUST00000064899 2 2 5 101 4 86872856 86872875 AGTTCAACGTCCAAGTAGAG 59 86822239 86872792 GGAATTCTGAGAGCTTTGC 58 NA Mus musculus 50 Pdzk1 ENSMUSG00000038298 ENSMUST00000058865,ENSMUST00000107070,ENSMUST00000107069 3 3 3 83 3 96672382 96672401 TGCTTAAAGAGGACGATAGC 59 96672447 96672873 CCTGCTGTACCTCTTTGAC 59 NA Mus musculus 50 Pogz ENSMUSG00000038902 ENSMUST00000042402 3 1 2 89 3 94668292 94668416 CCAAACTAGTGAGCATTGC 59 94668469 94668487 TATTCACCAATTTGGCCAC 58 NA Mus musculus 50 Ube2l3 ENSMUSG00000038965 ENSMUST00000115699,ENSMUST00000090192 2 2 2 63 16 17160119 17160137 TGTCTGCCAGTCATTAGTG 59 17154367 17160093 ACTGGATTACTTGGTCAGTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 D1Pas1 ENSMUSG00000039224 ENSMUST00000045108 1 1 1 60 1 188793477 188793496 TTTGAACACCATTACAAGGG 58 188793519 188793537 ATCCTCCACTAAATCTGCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp469 ENSMUSG00000039477 ENSMUST00000036253,ENSMUST00000100498 2 2 2 94 5 143538113 143538395 TTGCTCCGAGAAAGTAAGG 59 143538037 143538055 CCAGTCACCATAAGGTTGG 59 NA Mus musculus 50 4930524L23Rik ENSMUSG00000039545 ENSMUST00000065293 2 1 1 86 X 7154823 7154844 CAGTTCCAGTCTTGTTATTTCC 59 7155073 7155092 GAGTTCCAGGTATCCAACTG 59 NA DesignNoJunction Mus musculus 50 Slc6a5 ENSMUSG00000039728 ENSMUST00000056442,ENSMUST00000107605 2 2 2 82 7 57193759 57197146 CAACTGCTACAGGGATACG 59 57197190 57197210 TGACAGAGAAGATGACAAACC 59 NA Mus musculus 50 Ppapdc2 ENSMUSG00000040105 ENSMUST00000045674 3 1 1 69 19 29039301 29039319 ATTGTGGATTATTGCTGGC 58 29039352 29039370 GTCACTGTTGATTCCACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Fmo1 ENSMUSG00000040181 ENSMUST00000111518,ENSMUST00000064350 2 2 3 178 1 164780342 164781491 TTCAATACCAAAGTGTGCAG 58 164771186 164780201 GTAAAGCAGACTGGGAAGG 59 NA DesignRelaxed Mus musculus 50 Tm7sf3 ENSMUSG00000040234 ENSMUST00000111655 2 1 2 128 6 146574726 146574744 TACATACTTTGTGCTCAGC 57 146574267 146574635 CCCTTAGTAAATGAAACCGT 57 NA DesignNoJunction Mus musculus 50 AI848100 ENSMUSG00000040297 ENSMUST00000097505 3 1 1 80 1 163759414 163759432 CAACTGACCAACATGACAC 58 163758427 163759370 CTGACGATCTGAAACCTCC 59 NA Nonspecific Mus musculus 50 4932412H11Rik ENSMUSG00000040367 ENSMUST00000044039 3 1 1 105 5 3865694 3865712 GTTGCCAACAGTATCACTG 58 3865780 3866379 CATTTAATGGAGTAGTGGGC 58 NA Mus musculus 50 Ggt6 ENSMUSG00000040471 ENSMUST00000076443,ENSMUST00000100903,ENSMUST00000108499 3 3 3 77 11 72249149 72249167 ATCACAAGCTACAACTCTG 57 72249208 72249226 GCTCTGCTATCTCTTCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Abcg5 ENSMUSG00000040505 ENSMUST00000066175 3 1 1 167 17 85072994 85075379 GGACTTCTACAACAAGAAGGT 59 85071618 85072865 TCTAGCATCATGACCTTGG 58 NA Mus musculus 50 Hisppd1 ENSMUSG00000040648 ENSMUST00000112845,ENSMUST00000042509 2 2 2 80 1 99640686 99640705 CAGGAATAAACCGTAAGGTC 57 99637764 99640643 TTCGGTTATCTTCCTCCTC 58 NA Mus musculus 50 Agbl2 ENSMUSG00000040812 ENSMUST00000051831,ENSMUST00000099743,ENSMUST00000111483,ENSMUST00000111482,ENSMUST00000037219,ENSMUST00000037206,ENSMUST00000111481 3 7 7 101 2 90643263 90643281 ATCTTCCTGTATGGCTGTC 58 90643345 90645964 GAAAGAGAACTTGTCTGGTG 58 NA Mus musculus 50 4930563P21Rik ENSMUSG00000041255 ENSMUST00000040856 3 1 1 112 2 113129918 113129936 CTCTGATCCAGAAACCCTG 59 113130984 113131492 AGTCACTTTCCATCTTGGC 59 NA Mus musculus 50 B4galnt3 ENSMUSG00000041372 ENSMUST00000057283 2 1 1 81 6 120173668 120173686 ACAGGAAAGGAATGGACAG 59 120172356 120173623 GGGAGGCTGATAAACTCAC 59 NA Mus musculus 50 Ddx24 ENSMUSG00000041645 ENSMUST00000044923,ENSMUST00000110001 1 2 2 107 12 104654472 104655496 TCTGCAAGACTGTGTTCTC 59 104649505 104649523 TAAATCTCTGAGGTGCGAG 58 NA Mus musculus 50 Tmc7 ENSMUSG00000042246 ENSMUST00000044195 1 1 1 80 7 125702416 125702437 TGTATCCAATAAGTAGCTCTGG 59 125699470 125702375 CCTCCAAGAATCCTGTTCC 59 NA Mus musculus 50 EG434402 ENSMUSG00000042293 ENSMUST00000048824 2 1 1 72 9 48303732 48303750 ATCCTCCCAAGGAGATCTC 59 48303785 48303804 AGTAACCAGGAAGCTATCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Klhl14 ENSMUSG00000042514 ENSMUST00000049105 3 1 1 80 18 21713261 21716308 CATTTGAAAGGTTTCTCCCA 58 21713200 21713219 TTGGAGAATATTCCACTGGT 58 NA Mus musculus 50 Myo15 ENSMUSG00000042678 ENSMUST00000071880,ENSMUST00000094135,ENSMUST00000094136,ENSMUST00000108720,ENSMUST00000081823 1 5 5 80 11 60305400 60306064 TATATGGCTTTGAGGACCTG 58 60306107 60306125 ACAGGTACTGAAGGTTCTC 58 NA Mus musculus 50 Vps37d ENSMUSG00000043614 ENSMUST00000067935 3 1 2 69 5 135552368 135552386 CAAGTACCAAGAGCTTCGA 59 135550336 135552335 CATGCTCTTCTCCAGTCTC 59 NA DesignRelaxed Mus musculus 50 Rbm20 ENSMUSG00000043639 ENSMUST00000095969 1 1 2 81 19 53907207 53907226 GAATGACGTCATTAACCTGG 58 53907267 53909146 CAAGAAAGCCTGATTAGTTGAC 59 NA Mus musculus 50 BC039632 ENSMUSG00000044139 ENSMUST00000051384 2 1 1 87 7 135032308 135032459 ACACCAGTGATGTTTCCAG 59 135032239 135032257 TGCAACCGATTGTAGAGAC 59 NA Mus musculus 50 Olfr867 ENSMUSG00000044454 ENSMUST00000060780 1 1 1 60 9 19859484 19859502 TTATGAACCCTCGACTGTG 58 19859442 19859461 ACCCAGAACATTATGATCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000001474 ENSMUSG00000044639 ENSMUST00000056535 2 1 1 60 11 87757915 87757933 GATTGCAAGAGGACCTACC 59 87757956 87757975 CTGCACAATGATGTTCTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm1123 ENSMUSG00000044860 ENSMUST00000076730 3 1 1 101 9 98916540 98918811 CAGTTGTTGATTACATTGGGAG 59 98916460 98916478 TAAAGGTGAACATGCAGGG 59 NA Mus musculus 50 E330021D16Rik ENSMUSG00000045291 ENSMUST00000058713 1 1 1 60 6 136351142 136351161 ACAGCTTATATGACTGGCAC 59 136351101 136351120 CTGTACAAGCAACTATCAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Wdr81 ENSMUSG00000045374 ENSMUST00000051512,ENSMUST00000100845 2 2 2 89 11 75263035 75263312 CATCTTGTTATGTTGGGCC 58 75262964 75262982 TCTTCTGGTAGATGTTGCC 58 NA Mus musculus 50 4932409I22Rik ENSMUSG00000045912 ENSMUST00000059699 3 1 1 67 10 79074922 79074940 TTCTTCTTTGATGGCCTGG 59 79074873 79074892 TTATTGACCACCTTGATCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hnrnpa1 ENSMUSG00000046434 ENSMUST00000036004,ENSMUST00000087351 1 2 2 80 15 103072013 103072343 TCTCAAGAGAAGATTCTCAGC 59 103072382 103072403 CAGTGTCTTCTTTAATACCACC 58 NA Nonspecific Mus musculus 50 Bdh1 ENSMUSG00000046598 ENSMUST00000089759,ENSMUST00000115227,ENSMUST00000115226 1 3 3 85 16 31450040 31455120 ATCCTGAGAAGGGAATGTG 58 31455169 31455187 ATATGTCTCCATGCTGGTG 59 NA Mus musculus 50 D9Ertd402e ENSMUSG00000046603 ENSMUST00000052740 2 1 1 99 9 122740887 122740905 CCACACCTTCTACAACCAG 59 122740967 122742653 ATACCTGTCACTGCTAAGGA 59 NA Mus musculus 50 Olfr218 ENSMUSG00000046643 ENSMUST00000057548 1 1 1 60 1 175133518 175133536 CGAGTTCCTCTTTGAAGGT 59 175133560 175133578 AATAAAGAAGCCAAGCCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mrps7 ENSMUSG00000046756 ENSMUST00000058109,ENSMUST00000116321 1 2 2 98 11 115466137 115466155 GAAGTATGACCAGGAGCTC 59 115466217 115466345 GTGAATTTGCTGATGACCG 59 NA Mus musculus 50 Zfp654 ENSMUSG00000047141 ENSMUST00000052588 1 1 1 60 16 64785328 64785349 CTGTAATGAAGTGGAGTAAAGG 58 64785289 64785307 TGAGAATCCTCAAACTGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ear11 ENSMUSG00000047222 ENSMUST00000061936 3 1 1 60 14 51875249 51875268 TCTGTATACTCACAACTCCG 58 51875208 51875228 GATCTTGTTGTTCGGTATCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr68 ENSMUSG00000047415 ENSMUST00000110066 3 1 3 77 12 102125906 102125924 AAGAGACAACACCAGTGTG 59 102117579 102117599 CAAATGTATCAGGATCTAGGC 57 NA DesignNoJunction, InUTR Mus musculus 50 Rnf152 ENSMUSG00000047496 ENSMUST00000058688 2 1 1 172 1 107181524 107251631 CGTGACAGATTCAGAAATTAGC 59 107181373 107181391 CATTCCAACAGGGAATCCT 59 NA InUTR Mus musculus 50 C1galt1c1 ENSMUSG00000048970 ENSMUST00000058265 3 1 1 60 X 35985052 35985071 CCAAAGATGTGAGTCTTTGG 58 35985011 35985029 GCTTTGTCACAGTGTTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lrp1b ENSMUSG00000049252 ENSMUST00000052550,ENSMUST00000100131 2 2 2 81 2 40457110 40466964 CATATCAGCACAAGGAGCA 59 40457047 40457068 CTAAACCAATCACTAGAGTGGT 59 NA Mus musculus 50 Upk1b ENSMUSG00000049436 ENSMUST00000057767 2 1 1 82 16 38787403 38788104 GACACGTAATTGTTGGTATGTG 59 38787342 38787360 TGGGTAAAGACTGTGTTGG 59 NA Mus musculus 50 Vsig8 ENSMUSG00000049598 ENSMUST00000061835 2 1 1 208 1 174491735 174492096 TGAAAGTCTCAGACTCCCA 59 174492268 174492286 GATCTCACTAGCCAAGTCG 59 NA DesignRelaxed Mus musculus 50 Zfp668 ENSMUSG00000049728 ENSMUST00000106263,ENSMUST00000106262,ENSMUST00000106261,ENSMUST00000054415 3 4 4 175 7 135010876 135011286 TTACGCAACCATGAAAGGT 59 135010719 135010737 CTTTGGTAAGAGCTGAGCT 59 NA DesignNoJunction Mus musculus 50 Olfr642 ENSMUSG00000049797 ENSMUST00000052660 2 1 1 60 7 111198316 111198334 ATTCCTACTGCTTACACCC 58 111198274 111198292 CTGTTGATGGTGGTATCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gm71 ENSMUSG00000049882 ENSMUST00000058639 2 1 1 153 12 70682217 70683273 ACTATGAGGAGTCCTTGGA 58 70680975 70680993 AAGTCAAAGTCTAGCTGCA 58 NA Mus musculus 50 Neto1 ENSMUSG00000050321 ENSMUST00000058829 3 1 1 91 18 86567768 86574036 CTACATCATAGAAGCTGCC 57 86574091 86574109 GATCAAATTTGCACTCCCA 58 NA Mus musculus 50 NM_178906.4 ENSMUSG00000050570 ENSMUST00000062772 2 1 1 62 9 52486157 52486175 TCATCTTCTGTCTCCTCGT 59 52486113 52486131 TCTTCATCCTACGCTTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cited1 ENSMUSG00000051159 ENSMUST00000050551,ENSMUST00000113622,ENSMUST00000101336 1 3 3 83 X 99443944 99443962 AATGCCAACTATGTCGAGG 59 99443325 99443343 GAGTTCATCTCCTGGTTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Zfp524 ENSMUSG00000051184 ENSMUST00000086349 3 1 1 67 7 4969656 4969674 CAATGTCCCTCATGTAGGG 59 4969705 4969723 TGTTTGCGTTTGTAATGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tceal8 ENSMUSG00000051579 ENSMUST00000060101 3 1 1 152 X 132706726 132706744 GTCCTTATAGTCTAGGCCC 57 132705580 132706187 GAATTAATCCTGTAGGTACCTG 57 NA InUTR Mus musculus 50 Pcdhb2 ENSMUSG00000051599 ENSMUST00000056522 1 1 1 60 18 37455335 37455353 GACATCAATGACAATGCCC 59 37455377 37455395 TCTCTGGGATCTGAACCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lrrc33 ENSMUSG00000052384 ENSMUST00000115165,ENSMUST00000099991,ENSMUST00000115163 3 3 3 60 16 32144474 32144492 CATCCTAGAGTGGTTCCTG 58 32144432 32144450 GTCCAGTATCTCCAATTCG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ezr ENSMUSG00000052397 ENSMUST00000064234,ENSMUST00000085833,ENSMUST00000097429 3 3 3 85 17 6951662 6951682 GAGTGAGATCAGGAACATCTC 59 6947187 6951616 CGTAGAACACAAAGTCAGGT 59 NA Mus musculus 50 Cyp2j5 ENSMUSG00000052520 ENSMUST00000030299 3 1 1 98 4 96325347 96325366 TTTGATTATGAGGACTGCCA 59 96308125 96325286 GAAGCCATTGTAGAGTTGG 58 NA Mus musculus 50 A1cf ENSMUSG00000052595 ENSMUST00000075838 1 1 1 80 19 32020420 32021859 GTTCCCAGGATATGCTGTC 59 32021903 32021921 TCTTGTCCAAGTGTCACTG 59 NA Mus musculus 50 Nfib ENSMUSG00000052747 ENSMUST00000064770 1 1 1 60 4 81936683 81936703 TCTGTCACTGAGAACTTTGAG 59 81936643 81936663 GAGAAATATCATTGAGGTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cyp2j6 ENSMUSG00000052914 ENSMUST00000030303 2 1 1 88 4 96198380 96198398 TGATGATCACCGGAAAGAC 59 96196202 96198329 TCTTCTCTGGGTACTTTGTC 58 NA Mus musculus 50 E330013P04Rik ENSMUSG00000053117 ENSMUST00000065383 3 1 1 84 19 60227487 60228617 CCTGATTCTTATAAGGCAGG 57 60228664 60228682 TTAAACGGTGGTGATTTCC 57 NA InUTR Mus musculus 50 Btn2a2 ENSMUSG00000053216 ENSMUST00000041541,ENSMUST00000110432,ENSMUST00000110433 1 3 3 80 13 23573805 23574597 CTCATTCCAGAATCCTTCGT 59 23573744 23573763 AATCAGCATTACTACAGGCA 59 NA Mus musculus 50 9530002K18Rik ENSMUSG00000053729 ENSMUST00000066328 2 1 1 60 18 44327804 44328776 TTAAAGAGCCAAATTGCACC 59 44327763 44327781 TTCTCAGCGATATTGGAGC 59 NA DesignRelaxed Mus musculus 50 9530002K18Rik ENSMUSG00000053729 ENSMUST00000066328 3 1 1 61 18 44327804 44328776 TTAAAGAGCCAAATTGCACC 59 44327762 44327780 GTTCTCAGCGATATTGGAG 57 NA DesignRelaxed Mus musculus 50 A630033H20Rik ENSMUSG00000054293 ENSMUST00000067249 3 1 1 60 X 104366864 104366882 GCCAATAACAGTGAATCGT 58 104366905 104366924 ATGAAGCCATAGTAATGTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gimap4 ENSMUSG00000054435 ENSMUST00000067506 2 1 3 105 6 48640853 48640871 AGTTCCAGAATCGCTACTG 59 48640939 48641407 GAAGACAGAAACATGCTCTG 58 NA Mus musculus 50 Mettl7a ENSMUSG00000054619 ENSMUST00000067752 1 1 2 63 15 100143525 100143543 ATGGATGCAATCTGACGAG 59 100143570 100143588 TTTAGCTTCGAGAAGCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Srrp ENSMUSG00000054679 ENSMUST00000067864,ENSMUST00000108159 1 2 2 119 4 33313131 33317903 GACAGCCTGAAAGAGTCTC 59 33317986 33318004 AGAATTCCTTCTCGGTGTC 58 NA Mus musculus 50 Klhl26 ENSMUSG00000055707 ENSMUST00000066597 1 1 1 168 8 72979506 72979524 TTAAGTGCACCTTCTCTGC 59 72976910 72979375 AACATGGCCCTAAAGTAGTC 59 NA Mus musculus 50 Sag ENSMUSG00000056055 ENSMUST00000077772 1 1 1 88 1 89706908 89706926 CTATGTAGACCACGTCAGC 59 89709595 89711263 TGACATACACCTTCTTCCC 58 NA Mus musculus 50 Olfr394 ENSMUSG00000056921 ENSMUST00000071478 2 1 1 60 11 73701466 73701487 ATTACACTAGCATCATGAGTCC 59 73701427 73701446 AGTATCCACAACAGTAGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Musk ENSMUSG00000057280 ENSMUST00000081919,ENSMUST00000098057,ENSMUST00000098059,ENSMUST00000084578,ENSMUST00000102893 3 5 5 81 4 58381879 58385907 TTGTGAAACTCTTAGGTGTG 57 58385951 58385969 TCATTGAGGTCACCATAGG 58 NA Mus musculus 50 Gapdh ENSMUSG00000057666 ENSMUST00000073605 3 1 1 133 6 125112334 125112352 CATCTTGGGCTACACTGAG 59 125112109 125112240 CATTGTCATACCAGGAAATGAG 59 NA Nonspecific Mus musculus 50 Bak1 ENSMUSG00000057789 ENSMUST00000078691,ENSMUST00000025034 3 2 2 81 17 27159429 27159448 TTACTAGAACAGCTTCAGCC 59 27158276 27159386 TGCCACTCTTAAATAGGCTG 59 NA Mus musculus 50 Usf2 ENSMUSG00000058239 ENSMUST00000058860,ENSMUST00000108119 2 2 2 82 7 31732038 31732057 AGATCAACAACTGGATCGTC 59 31731890 31731993 CCCTTTACTTGCTCCTGTC 59 NA Mus musculus 50 Mrps14 ENSMUSG00000058267 ENSMUST00000078878 1 1 1 80 1 162127223 162129565 AAAGGACCTTCAGGAAATGG 59 162129605 162129626 CAGCGATTTCTGATTCTAACAG 59 NA Nonspecific Mus musculus 50 Zfp68 ENSMUSG00000058291 ENSMUST00000110905,ENSMUST00000085852,ENSMUST00000063262,ENSMUST00000110903 2 4 4 80 5 139053100 139053119 GCTGATCTTCAATTTGGAGC 59 139049037 139053060 ATATTCTGGAAATCTGGGACAC 59 NA Mus musculus 50 Olfr58 ENSMUSG00000058659 ENSMUST00000079660 2 1 1 65 9 19587905 19587924 TATGGACAGCTTTCTACTGG 58 19587952 19587970 TGTAGAGGGTGACAAATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nfe2 ENSMUSG00000058794 ENSMUST00000075192 3 1 1 100 15 103081427 103081445 GGAACAGGTTATCACAGCT 59 103079865 103081363 TGGAACATTTAGACCCTGC 59 NA Mus musculus 50 EG546038 ENSMUSG00000059463 ENSMUST00000110767 2 1 2 60 8 19141513 19141531 TTACCACGGTAAGTCAAGC 59 19141554 19141573 CTCAGTATTTCCCAAGTGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 9630025I21Rik ENSMUSG00000059839 ENSMUST00000019572 2 1 1 132 13 67582658 67582677 TTATAGCCACCTTGTGTTCC 59 67575871 67582107 TTCATTGCCTGTTGTTCCT 59 NA DesignNoJunction Mus musculus 50 Olfr604 ENSMUSG00000059874 ENSMUST00000071844 1 1 1 68 7 110531903 110531924 CATCATCTATGGCTTATTCACC 58 110531856 110531875 GCATAGGAGAAAGCAATGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ipmk ENSMUSG00000060733 ENSMUST00000079252 2 1 1 83 10 70835554 70835572 TCAGAGAAGATTCAGCAGC 59 70835619 70839461 ATGATAAACCCTCATGCCG 59 NA Mus musculus 50 B2m ENSMUSG00000060802 ENSMUST00000102476 3 1 1 85 2 121976818 121976837 ACTGAGACTGATACATACGC 58 121976885 121977398 GATCACATGTCTCGATCCC 59 NA InUTR Mus musculus 50 Olfr944 ENSMUSG00000060905 ENSMUST00000079650 1 1 1 60 9 39025365 39025383 ACAATTCTCTGATTTCGGG 57 39025405 39025425 CCAGTGATTAAGGATGAACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr168 ENSMUSG00000061361 ENSMUST00000078554 3 1 1 60 16 19530963 19530982 TTTCATTCTCTTAGGGTTGC 57 19530922 19530943 GATGAGCATCATAAGTAGTAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Krt79 ENSMUSG00000061397 ENSMUST00000108882,ENSMUST00000023799 2 2 2 82 15 101762234 101762253 AAGTCAAAGCCCAGTATGAG 59 101761970 101762192 CAGTTCTTCATATTTGGTCTGG 59 NA Mus musculus 50 Fmr1nb ENSMUSG00000062170 ENSMUST00000071848 1 1 2 80 X 66022259 66025228 GTAAGGGACAAGCCTACAC 59 66025272 66025290 CATAGGCAGAAATCCCAGG 59 NA Mus musculus 50 Olfr909 ENSMUSG00000062621 ENSMUST00000074987 2 1 1 60 9 38331397 38331416 CTGTTCCTACTCTTTCTGCT 59 38331439 38331457 TGATCAAAGCCAAATTCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 NM_183296.1 ENSMUSG00000062996 ENSMUST00000074045 1 1 1 63 16 88962989 88963009 CCTGGTGTGGATGTAACAG 59 88962944 88962962 TATCCATAGCTTCCAGAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr410 ENSMUSG00000063116 ENSMUST00000080365 3 1 1 60 11 74148486 74148505 GTATCAGTGTCACTATTCCC 57 74148445 74148463 GGAATTGTACGCTTATGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rpl12 ENSMUSG00000063328 ENSMUST00000076703 1 1 1 60 3 129771719 129771737 TGAGATTGTCAACATTGCC 58 129771761 129771779 TCCAGAAAGTTCTCTAGCC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Ghrl ENSMUSG00000064177 ENSMUST00000080745,ENSMUST00000064993 1 2 3 129 6 113669411 113669429 AAGACCATGCTGTCTTCAG 59 113669205 113669318 TGGATTCCTTTCTCTGCTG 59 NA Nonspecific, InUTR Mus musculus 50 4921528I07Rik ENSMUSG00000064299 ENSMUST00000072612 1 1 1 80 9 114188483 114209108 TGTCACAACAGAAGTGGTC 59 114188421 114188439 ATCATCTCTACTGGTGGCT 59 NA Mus musculus 50 AY702102 ENSMUSG00000067581 ENSMUST00000087964 1 1 1 60 2 169788002 169788022 CTTTATCGGAAGATCAAACCC 58 169787962 169787983 GATCTACTGATGGAATTTGAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Agtr2 ENSMUSG00000068122 ENSMUST00000089188 2 1 1 104 X 21062012 21062031 TAACTGCTTTAAACACTGGC 58 21063280 21063298 GTAATGTTTCTGCTGGTGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Insm1 ENSMUSG00000068154 ENSMUST00000089257 3 1 1 182 2 146049510 146049528 CCCGTCTGAGAATAGACAG 58 146049674 146049692 GAAGAGGACACTTTCACCC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 V1rc7 ENSMUSG00000068475 ENSMUST00000089918 1 1 1 60 6 57184266 57184284 TTATCCCGCAATTACTCCT 58 57184308 57184326 TACCACACGGATTACTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hemt1 ENSMUSG00000068600 ENSMUST00000096399 1 1 2 80 15 74651743 74651762 GTAACACCTTCTCATGTCCA 59 74651805 74654432 TGTTCACACGAAAGGAGAC 59 NA Mus musculus 50 Ptprz1 ENSMUSG00000068748 ENSMUST00000090568,ENSMUST00000115377 3 2 2 80 6 22985114 22985132 AACCGTCAACATATTTGGC 58 22985176 22986898 AAGACATACTGCTCCTCTG 58 NA Mus musculus 50 V1ri9 ENSMUSG00000069297 ENSMUST00000091737 3 1 1 60 13 22336411 22336429 ATCAGTCCTAGGACAACCA 59 22336452 22336471 TAAGAACTTGCCTCGAAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cacng7 ENSMUSG00000069806 ENSMUST00000092891 3 1 1 87 7 3338621 3338995 GAATATTCTGAAGACAGTGCG 59 3339043 3339062 GATGTTGCTGATGACAAAGG 59 NA Mus musculus 50 Trpc2 ENSMUSG00000070425 ENSMUST00000106949,ENSMUST00000094129,ENSMUST00000084843,ENSMUST00000106951,ENSMUST00000106944,ENSMUST00000106943 2 6 8 88 7 109239051 109239069 TCATGATCATCCTGACTGC 59 109239121 109242053 TTCGTTGAAATTGCCTAGC 58 NA Mus musculus 50 Tgfbrap1 ENSMUSG00000070939 ENSMUST00000095014 2 1 2 80 1 43111408 43111429 CTTAAGAAATACCCTAAAGCCC 58 43110401 43111367 GTGGTACTCTTCTTTCTGC 57 NA Mus musculus 50 Tcrb-V20 ENSMUSG00000071519 ENSMUST00000096003 2 1 1 196 6 41324359 41324888 ACTCTTAGCTTTGGTGTCAG 59 41323919 41323937 CCCTGGAGTTCTCTATTGC 59 NA Mus musculus 50 Sod3 ENSMUSG00000072941 ENSMUST00000101208 1 1 1 60 5 52759203 52759221 TTGGCCTTCTTGTTCTACG 59 52759244 52759263 GATTTGACATGGTGACAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Q3TUL6_MOUSE ENSMUSG00000073367 ENSMUST00000097270 1 1 1 61 17 90854171 90854191 TGACCTGTAGATTGCAATAGG 59 90854214 90854232 ACATCCACCATTTCCATGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 ENSMUSG00000073482 ENSMUSG00000073482 ENSMUST00000097444 3 1 1 117 1 184339039 184339057 GCAGGAGAACAATAATCGT 57 184338940 184338958 TGGTTCATGGTTCCTAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Apitd1 ENSMUSG00000073705 ENSMUST00000105696,ENSMUST00000030813,ENSMUST00000105695 2 3 3 90 4 148506413 148506431 AAACAGGTGAACTTCAGCA 59 148505755 148505773 ACATTTCAAGGTCTTTGGC 58 NA DesignNoJunction Mus musculus 50 Ccl21c ENSMUSG00000073878 ENSMUST00000098123 3 1 1 173 4 41985971 41985989 TCTAAGCCTGAGCTATGTG 58 41986126 41986226 CTGTTCAGTTCTCTTGCAG 58 NA Nonspecific Mus musculus 50 Zfp94 ENSMUSG00000074282 ENSMUST00000108436,ENSMUST00000093395 1 2 4 156 7 25094208 25096493 CAAGGTCAAGGAGATGGTG 59 25088873 25088892 CTCCTCAGGATTCTTGTCTC 59 NA Mus musculus 50 ENSMUSG00000074381 ENSMUSG00000074381 ENSMUST00000098818 3 1 1 62 8 41018266 41018284 TCTTGACTGTGTTGTGGTC 59 41018222 41018240 GAGAGCCATCATCCATGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2610203C20Rik ENSMUSG00000074415 ENSMUST00000098868 2 1 1 107 9 41389412 41389430 CCTAGAGCTCACATTCTCC 58 41398317 41398336 GAGACATTACTGAGAAAGGG 57 NA DesignNoJunction Mus musculus 50 Ttc30a2 ENSMUSG00000075272 ENSMUST00000099995 2 1 1 60 2 75814302 75814321 GAAGAAAGAATGCACATTGG 57 75814261 75814279 AAGCTTTCAACTGTCTGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075509 ENSMUSG00000075509 ENSMUST00000100368 2 1 1 60 2 21803118 21803136 AATCTGCTCATGTCATTGG 57 21803160 21803178 CATTAAGCTTCGTGGAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Prhoxnb ENSMUSG00000075543 ENSMUST00000100433 2 1 1 60 5 148126926 148126944 AGGTCTCACTAGCCTAGAC 59 148126884 148126902 GTACTGAGCATTGAGTTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 2810407C02Rik ENSMUSG00000075700 ENSMUST00000107924 3 1 1 134 3 58392447 58394099 CTTTAAATGATGTGCCAGTG 57 58394196 58394214 GCTATGATCGATGATGTGG 57 NA Mus musculus 50 TRBV23 ENSMUSG00000076478 ENSMUST00000103279 3 1 1 62 6 41166093 41166111 TATGTAGCACTTTGCCTCC 59 41166243 41166262 TCTTGGCTTCTGTGTAACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV14-130 ENSMUSG00000076506 ENSMUST00000103307 3 1 1 62 6 67741426 67741447 GACTATTCTCTGACAATCAGCA 59 67741467 67741488 CTGTAGACAGTAATAGTCTGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV14-100 ENSMUSG00000076524 ENSMUST00000103325 3 1 1 60 6 68469264 68469285 AGGGCATTAGCAGTAATATAGG 59 68469306 68469324 AGGCCCTTAAATGATTTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV3-5 ENSMUSG00000076599 ENSMUST00000103400 3 1 1 61 6 70613799 70613817 GGTCTAGGACAGACTTCAC 58 70613841 70613860 ATAGGTTGCAACATCATCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV2 ENSMUSG00000076759 ENSMUST00000103568 2 1 1 72 14 53186999 53187448 TGATCTTGGTCTCATGGAG 58 53187484 53187502 ACTTCTTGCCCTTCATAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV13D-1 ENSMUSG00000076778 ENSMUST00000103588 1 1 1 60 14 53471401 53471419 TCAGCGTGTTCTACAATCC 59 53471443 53471461 ACTGTTGTGGATGTCAGTC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 IGLV3 ENSMUSG00000076939 ENSMUST00000103751 3 1 1 110 16 19241614 19241736 CATTGCTCAGGTTCTTTCTC 58 19241523 19241541 CGTACTGTGCTGACTACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dnahc3 ENSMUSG00000078596 ENSMUST00000106515 3 1 1 81 7 127105828 127108990 TTTGCATCTTCACAAGTGG 58 127105765 127105784 CTGTATCCTCAGAGGTTTGG 59 NA Mus musculus 50 A2AAF5_MOUSE ENSMUSG00000078600 ENSMUST00000106604 3 1 1 109 11 114060112 114060130 CAAGACTGTAGTATGGGCT 58 114060348 114060366 AAGCTTCTGTAAGTGCCTC 59 NA DesignNoJunction Mus musculus 50 Slfn1 ENSMUSG00000078763 ENSMUST00000037994 2 1 1 60 11 82934619 82934637 CTTGGGACAGAAAGTAGGA 58 82934660 82934679 TGTTCCTGTTCTCTTCTACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 5830418K08Rik ENSMUSG00000079706 ENSMUST00000065229 3 1 1 101 9 15159116 15159135 ATACAAAGCTGAGATTGAGC 57 15157528 15159052 TTTCTTGTTCTCGAACCTG 57 NA Mus musculus 50 Drp2 ENSMUSG00000000223 ENSMUST00000113228,ENSMUST00000113226,ENSMUST00000000228,ENSMUST00000113224 3 4 4 81 X 130969573 130969591 TGAGAGGCTTAAGCAACTC 59 130969636 130971573 AACTTGGACAGAAGTGGAG 59 NA Mus musculus 50 Myo18a ENSMUSG00000000631 ENSMUST00000102488,ENSMUST00000092887,ENSMUST00000092886,ENSMUST00000100794 1 4 10 81 11 77667380 77671229 GACCTCATCAACAGTGAGG 59 77671274 77671292 TTGACAACCAGGACTTGAC 59 NA Mus musculus 50 Acp5 ENSMUSG00000001348 ENSMUST00000069330,ENSMUST00000115315 3 2 2 90 9 21932178 21932196 CTTGTCAAGAACTTGCGAC 59 21931694 21932124 CGTCCTGAAGATACTGCAG 59 NA Mus musculus 50 Rab34 ENSMUSG00000002059 ENSMUST00000108323,ENSMUST00000002128,ENSMUST00000108322 1 3 4 81 11 78004776 78004870 CAAGAAGGACCTGAGTACTC 59 78004914 78004932 CTCGGCCTTAATCTCTTGG 59 NA Mus musculus 50 Scin ENSMUSG00000002565 ENSMUST00000002640 3 1 2 82 12 40795908 40795927 AGAAAGGAGCAGAGTATGTG 59 40795613 40795863 CCAGAATTCCTCTGGTTCC 59 NA Mus musculus 50 Stat5b ENSMUSG00000004043 ENSMUST00000004145,ENSMUST00000107356,ENSMUST00000107357 1 3 3 92 11 100722702 100722720 GATGCAAGTGTTGTATGGG 58 100722776 100723049 AAGTCAATAGCATCCCACG 59 NA Mus musculus 50 Emid2 ENSMUSG00000004415 ENSMUST00000111103,ENSMUST00000057497 2 2 2 107 5 137312604 137323354 GGACTCTCATTAGACCGAC 58 137241225 137312534 TCATACATTCTTCCTCGCAG 59 NA Mus musculus 50 Sgce ENSMUSG00000004631 ENSMUST00000004750 3 1 4 105 6 4641502 4641520 GATTTCCTCGTTACCCTGG 59 4639754 4641433 GGACAAGCTGGATAACTCC 59 NA Nonspecific Mus musculus 50 Aqp1 ENSMUSG00000004655 ENSMUST00000004774 2 1 1 74 6 55295868 55295886 GCAACTTCTCAAACCACTG 59 55296648 55296666 AGTCATAGATGAGCACTGC 59 NA DesignNoJunction Mus musculus 50 Senp3 ENSMUSG00000005204 ENSMUST00000005336,ENSMUST00000066760 3 2 3 152 11 69488090 69490592 TGTGGACATCTTCAATAAGG 57 69487774 69487976 TACTTGGCAATATGCTTAGG 57 NA Mus musculus 50 Med15 ENSMUSG00000012114 ENSMUST00000012259,ENSMUST00000080936,ENSMUST00000100120 2 3 3 83 16 17653335 17653353 AAGTTCCTGGTGAACTTGG 59 17652887 17653288 GAGGTCCTTATCATCCAGC 59 NA Mus musculus 50 Dhdds ENSMUSG00000012117 ENSMUST00000012262,ENSMUST00000105887,ENSMUST00000105889,ENSMUST00000105885 2 4 5 93 4 133550141 133550160 TGAGAACTTCAAACGTTCCA 59 133548486 133550085 CAGCTTCTCCTGTTCTTCC 59 NA Mus musculus 50 Ttll5 ENSMUSG00000012609 ENSMUST00000110219,ENSMUST00000040179 3 2 6 132 12 87361544 87365178 AACTCCACAGGATCTTTGG 59 87365271 87365292 CTTAAATTGTCCCTGACTTCAC 59 NA Mus musculus 50 4933402N03Rik ENSMUSG00000013668 ENSMUST00000070980,ENSMUST00000013812 1 2 2 116 7 138282716 138289369 GAAATTCAACATCTCGGTGG 59 138282619 138282637 TTTGTAGTCTGCAGACTGC 59 NA Mus musculus 50 Gorasp2 ENSMUSG00000014959 ENSMUST00000028509,ENSMUST00000112201,ENSMUST00000112205 1 3 4 89 2 70526449 70526467 CAACTGTACCATTGTTGCC 59 70526519 70527248 GCATCAGACTTGGTAATGTG 58 NA Mus musculus 50 Acsf3 ENSMUSG00000015016 ENSMUST00000098337 2 1 2 96 8 125307992 125314499 AAAGAATCAGGTTCTGTGGG 59 125314558 125314576 CTGCATGGATGATGTAGGG 59 NA Mus musculus 50 Gata5 ENSMUSG00000015627 ENSMUST00000015771,ENSMUST00000108890 3 2 2 64 2 180063012 180063030 CTACATGAAGCTCCATGGG 59 180062507 180062527 TTCTTGTCTGGATACTCTCCT 59 NA DesignNoJunction Mus musculus 50 Syne1 ENSMUSG00000019769 ENSMUST00000116266 3 1 5 159 10 4922192 4922210 CAGTCTCTATCCAGCAGTG 59 4922331 4925978 CTATTCCCATCTGCCTTACTG 59 NA Mus musculus 50 Plek ENSMUSG00000020120 ENSMUST00000102881,ENSMUST00000020321 3 2 2 98 11 16885533 16885551 ACTACTATGATCCTGCTGG 57 16881928 16883209 TCTTCTTAACATCGTGACTG 57 NA Mus musculus 50 Pofut2 ENSMUSG00000020260 ENSMUST00000020493 2 1 2 124 10 76725211 76725229 TACGTCCTACAAGGTTACG 58 76725316 76726018 AACCAGCCTCTGTAATACTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Hmmr ENSMUSG00000020330 ENSMUST00000109303 3 1 3 84 11 40523442 40523460 GTACAATGACACAGCACAG 58 40523009 40523300 GGCAAGAGTATAGTCATGGT 58 NA Mus musculus 50 Rad50 ENSMUSG00000020380 ENSMUST00000102756 2 1 3 121 11 53505707 53505725 GAGATCCTCACGAAGAAGC 59 53499799 53505623 TCTTTGTCAGTAGCTTTCGT 59 NA Mus musculus 50 Ogdh ENSMUSG00000020456 ENSMUST00000003461,ENSMUST00000109797,ENSMUST00000101554,ENSMUST00000093350,ENSMUST00000081894 2 5 7 115 11 6242613 6246522 TTGTCAACAACCAGATTGG 58 6246601 6246619 GTCATCTGAGTTGACATGG 57 NA Mus musculus 50 Acox1 ENSMUSG00000020777 ENSMUST00000066587,ENSMUST00000021129 2 2 3 82 11 116043329 116044790 GAGATGGGTCATGGAACTC 59 116043265 116043285 CTGTTGAGAATGAACTCTTGG 58 NA Mus musculus 50 Myh10 ENSMUSG00000020900 ENSMUST00000102611,ENSMUST00000092984 1 2 4 120 11 68558905 68565446 AGGACCATAATATTCCTGGG 58 68565529 68573258 ATAAACTTGCCAAAGCGAG 58 NA Mus musculus 50 Gcn5l2 ENSMUSG00000020918 ENSMUST00000006973,ENSMUST00000103118 3 2 3 83 11 100572209 100572463 CATTGAACAGGGTGTACTG 58 100572144 100572163 GAGAGCTCAAACATTGTCTG 58 NA Mus musculus 50 Glrx5 ENSMUSG00000021102 ENSMUST00000021522 2 1 1 61 12 106278585 106278603 GGACCTAGTGGAAGAACTG 58 106278628 106278646 GGTCCTTCTCATCTACCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1600002O04Rik ENSMUSG00000021260 ENSMUST00000021685,ENSMUST00000101052 2 2 2 121 12 109550440 109550460 CTATGTCTACTATTCGGTGGG 59 109550540 109554677 CGATCTCCAGAATTATCCTCTC 59 NA Mus musculus 50 Traf3 ENSMUSG00000021277 ENSMUST00000060274 3 1 2 87 12 112486782 112486800 TGAAGACACAGATTGTCCC 59 112486851 112490886 CTGGTTTGTACCCTCACTC 59 NA Mus musculus 50 Prl8a8 ENSMUSG00000021346 ENSMUST00000018389,ENSMUST00000110350,ENSMUST00000018016 2 3 3 80 13 27600270 27600289 AAGCCAAGGAGATTGAAGAG 59 27599224 27600229 TTGAGGTAGGATAGACCTCAG 59 NA Mus musculus 50 Slc4a7 ENSMUSG00000021733 ENSMUST00000057015 1 1 3 80 14 15607552 15607697 GAACACAAACTCAAGAAAGGAG 59 15607738 15607756 CATGATAGAGCAGACTCCC 58 NA Mus musculus 50 Peli2 ENSMUSG00000021846 ENSMUST00000111739 1 1 2 97 14 48787927 48787945 CTCTATAAGCGGACCTACG 58 48798820 48798838 TAGTAATGCTTTGCTGCTG 58 NA DesignNoJunction Mus musculus 50 Atp8a2 ENSMUSG00000021983 ENSMUST00000080368 3 1 2 80 14 60390577 60392549 GCTTGGACGAAATTCAGTC 59 60390515 60390534 GATGGTTGAATAGACACCGA 59 NA Mus musculus 50 Tsc22d1 ENSMUSG00000022010 ENSMUST00000100376 2 1 5 77 14 76903637 76905057 TTACTGATGCAGTTAGGCT 58 76905098 76906235 TTTCACCAGATCCATAGCT 57 NA DesignRelaxed Mus musculus 50 Tnfsf11 ENSMUSG00000022015 ENSMUST00000022592,ENSMUST00000110858 2 2 2 91 14 78699659 78699678 GATGAAACAAGCCTTTCAGG 59 78684133 78684233 CTTCCATCATAGCTGGAGC 59 NA Mus musculus 50 Cldn10a ENSMUSG00000022132 ENSMUST00000047761,ENSMUST00000100314 2 2 3 69 14 119272917 119273418 AACAAGACACCCAGAATGG 59 119273450 119273469 GATACTTGGTCCGAGAAGAC 59 NA DesignRelaxed Mus musculus 50 Ly6e ENSMUSG00000022587 ENSMUST00000023251,ENSMUST00000051698 3 2 2 101 15 74788298 74788707 ATGGAGCAAGTTCATTCCC 59 74788770 74788790 ACAGTAATGGTCTTTCTCCTG 59 NA Mus musculus 50 Zbtb20 ENSMUSG00000022708 ENSMUST00000114694,ENSMUST00000079441,ENSMUST00000114695 2 3 5 120 16 43577299 43577684 CTAGAACGGAAGAAACCCA 58 43577767 43577786 AAACAGCTTCAAAGTTCAGG 58 NA Mus musculus 50 Eif4a2 ENSMUSG00000022884 ENSMUST00000115341,ENSMUST00000023599 3 2 3 87 16 23111962 23113250 ATTCACAGAATTGGCAGAG 57 23113301 23113319 CACGAAGAATCCTCTTGTC 57 NA Mus musculus 50 Lima1 ENSMUSG00000023022 ENSMUST00000109024,ENSMUST00000073691 2 2 2 82 15 99636909 99636927 AAACCTCCATAAAGGACCG 59 99632635 99636863 CAGCTCATTTGTGTAGCTG 58 NA Mus musculus 50 Gtf2ird1 ENSMUSG00000023079 ENSMUST00000100654 1 1 7 81 5 134839837 134855814 GAAATACGATGAGGATGATGC 58 134839776 134839795 TTTCTCATTGAAGAGCTCCT 58 NA Mus musculus 50 Ccndbp1 ENSMUSG00000023572 ENSMUST00000099489,ENSMUST00000060455 1 2 3 93 2 120838691 120838709 TTTCTGATGAGATCAGCCC 59 120839747 120841877 AATTTCGCAGAACTGATCC 58 NA Mus musculus 50 Cryaa ENSMUSG00000024041 ENSMUST00000019192 1 1 2 81 17 31815412 31815430 TTTGTAATGCACCAACCAC 58 31816516 31816534 AGATGACAAACTTGTCCCG 59 NA DesignNoJunction Mus musculus 50 Mapk8ip3 ENSMUSG00000024163 ENSMUST00000115229,ENSMUST00000088345,ENSMUST00000115228 3 3 3 80 17 25041757 25041863 CATCTGGCAGTTCTTTAGTC 58 25041696 25041714 ATGTTCACAGATGGGTAGG 58 NA Mus musculus 50 2310002L13Rik ENSMUSG00000024512 ENSMUST00000025390 2 1 1 100 18 70401708 70401726 CTTACTGTTCAACGGAAGG 58 70400937 70400955 TACTTTCCAGAGGGAACAC 58 NA DesignNoJunction Mus musculus 50 Msr1 ENSMUSG00000025044 ENSMUST00000026021,ENSMUST00000110488 2 2 2 83 8 40709327 40709348 CTTGATGTTCAACTCCATACAG 59 40705404 40709285 CAATTTACTGATGTCCTCCTG 58 NA Mus musculus 50 Itga7 ENSMUSG00000025348 ENSMUST00000073153,ENSMUST00000099112 3 2 5 135 10 128391006 128391024 CAGTGATGGTGTACTTGGA 58 128391123 128394690 TTGAAGAATCCCAGCTTCC 59 NA Mus musculus 50 Baiap2 ENSMUSG00000025372 ENSMUST00000106233,ENSMUST00000106231,ENSMUST00000026436,ENSMUST00000106234,ENSMUST00000075180 2 5 6 98 11 119858321 119858339 AGTCTCAAAGCAAGCTGAG 59 119858401 119858817 GTGTCTTGTTCTCAGTGGT 59 NA Mus musculus 50 D3Ertd751e ENSMUSG00000025766 ENSMUST00000108065,ENSMUST00000026867,ENSMUST00000026868 2 3 3 173 3 41550487 41550506 ATACACTTGGGATGGTTTCC 59 41550639 41552604 GCTTCCACAACTTCATAATTCC 59 NA Mus musculus 50 Pard3b ENSMUSG00000025969 ENSMUST00000102822 3 1 6 89 1 62831662 62831680 TTTCCATCGATGACATTCG 57 62832871 62861921 CTCCTTCATATTCATCTGCA 57 NA Mus musculus 50 Il1rl1 ENSMUSG00000026069 ENSMUST00000097772,ENSMUST00000053043 3 2 2 84 1 40499317 40499454 TGGTTTAAGAACTGCAAAGC 59 40499501 40499519 CATCATGAGTCACGTTGTC 58 NA Mus musculus 50 Blzf1 ENSMUSG00000026577 ENSMUST00000027866,ENSMUST00000086032 1 2 2 80 1 166232465 166232483 AAGAATTCTGAAAGGAGGC 57 166229864 166232423 CTCACGATTTATCTCTGTCTG 57 NA Mus musculus 50 Sephs1 ENSMUSG00000026662 ENSMUST00000027973,ENSMUST00000115019 1 2 2 80 2 4810323 4812643 GTATATGATGGGCAGGATAGC 59 4812685 4812703 AGCATATTGTCACACTCCG 59 NA Mus musculus 50 Uhmk1 ENSMUSG00000026667 ENSMUST00000111348,ENSMUST00000027979 1 2 2 80 1 172135294 172135314 GAGGAGTGTCAGAAATATGGA 58 172130133 172135252 CTCAACGAAGACTTGTCCT 59 NA Mus musculus 50 Acbd5 ENSMUSG00000026781 ENSMUST00000028121,ENSMUST00000114526 1 2 3 140 2 22950030 22955097 AGGGAGAGGGAATAGAATACC 59 22955199 22955217 CTAATGAGCACAAGAGCGA 59 NA Mus musculus 50 Ralgds ENSMUSG00000026821 ENSMUST00000113894,ENSMUST00000028170,ENSMUST00000113893,ENSMUST00000100241,ENSMUST00000113892 3 5 5 80 2 28406070 28407616 CTCAGAGGATCACAAGCTG 59 28407660 28407678 ATGAAGTCATAGTTGGCGG 59 NA Mus musculus 50 Dnm1 ENSMUSG00000026825 ENSMUST00000113350,ENSMUST00000113352,ENSMUST00000091089,ENSMUST00000113365,ENSMUST00000035664,ENSMUST00000002626 1 6 9 80 2 32190337 32191310 TATCCATGGCATCAGAACG 59 32190275 32190293 CGAATCTTCTTCACCTGCT 59 NA Mus musculus 50 Gpsm1 ENSMUSG00000026930 ENSMUST00000114135 1 1 6 98 2 26180426 26181744 CATTACAAGGTGGGAGAGG 59 26181806 26181824 ATGTTTCTTGGCAAAGGTC 58 NA Mus musculus 50 Anapc2 ENSMUSG00000026965 ENSMUST00000028341 1 1 2 134 2 25129440 25130194 TGAGTTTCACAAGTGGATAGAG 59 25130289 25130307 AAGAATCTCTGTACGTGGC 59 NA Mus musculus 50 Fastkd1 ENSMUSG00000027086 ENSMUST00000073152,ENSMUST00000102706 3 2 2 87 2 69546627 69546645 GCATCTGTATTTCAGTCCA 57 69545754 69546576 AGATAAGGCCCTTAAGTCC 58 NA Mus musculus 50 Atf2 ENSMUSG00000027104 ENSMUST00000055833,ENSMUST00000112017,ENSMUST00000112016,ENSMUST00000100009 2 4 10 89 2 73689033 73691863 TCATTGTGGCTGATCAGAC 59 73688962 73688980 CAAATGGACTTGCCAACTC 59 NA Mus musculus 50 2210009G21Rik ENSMUSG00000027281 ENSMUST00000028737,ENSMUST00000099312 1 2 5 86 2 136825999 136869744 AGAAGAAAGAGGTTATGGCT 58 136869793 136869811 GTATTCTGGGAGTTCTGGA 57 NA Mus musculus 50 4930402H24Rik ENSMUSG00000027309 ENSMUST00000044766,ENSMUST00000103190,ENSMUST00000110248,ENSMUST00000110247,ENSMUST00000110246,ENSMUST00000110243 1 6 6 80 2 130632674 130636566 AAATATGAGTTGCAGGACGT 59 130632613 130632631 AAGCATGTTCTCCAGAGAC 59 NA Mus musculus 50 Smox ENSMUSG00000027333 ENSMUST00000110189,ENSMUST00000110186,ENSMUST00000028806,ENSMUST00000110188,ENSMUST00000110180 2 5 10 172 2 131345994 131346155 AGTACCTGAAGGTGGAGAG 59 131346291 131346309 CAACTGGATGACATGTGGA 59 NA Mus musculus 50 Crls1 ENSMUSG00000027357 ENSMUST00000028835,ENSMUST00000110122 1 2 2 80 2 132675670 132675691 CTACCTGATTCTTGAAGAAGAC 58 132675732 132680639 AATCCATCCAACAAATCCG 58 NA Mus musculus 50 Dnmt3b ENSMUSG00000027478 ENSMUST00000109773,ENSMUST00000072997,ENSMUST00000103151,ENSMUST00000109772,ENSMUST00000109774,ENSMUST00000081628,ENSMUST00000088976,ENSMUST00000103150 1 8 10 125 2 153500769 153501471 CTGGAAGAATTTGAGCCAC 58 153502442 153502460 AATACCCAACTCCTTGAGC 59 NA Mus musculus 50 Ect2 ENSMUSG00000027699 ENSMUST00000108300,ENSMUST00000108298,ENSMUST00000029248,ENSMUST00000075155 1 4 5 80 3 26997403 26999762 ATCATCCTTAGCAGGTATTCC 59 26997343 26997364 CGACTTAATGTATGACTTCTCC 58 NA Mus musculus 50 Rab33b ENSMUSG00000027739 ENSMUST00000054387,ENSMUST00000116342 3 2 2 60 3 51297615 51297634 CTCATAAGCTAAAGAGCCAC 58 51297655 51297675 CTAATTCTGTTATCAGGCAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Dclre1b ENSMUSG00000027845 ENSMUST00000029435,ENSMUST00000106833,ENSMUST00000106834,ENSMUST00000106832 2 4 5 74 3 103612021 103612042 CTGTCATGTTTCTCTTTGAAGG 59 103611473 103611492 GCATGGATGGTGTATATCGA 59 NA DesignNoJunction Mus musculus 50 Slc16a4 ENSMUSG00000027896 ENSMUST00000106723 1 1 2 129 3 107106164 107106182 TACCTGGCACTAATACTGC 58 107107411 107108968 GAGTTACATCTGCTATTGGTG 58 NA Mus musculus 50 Ddx20 ENSMUSG00000027905 ENSMUST00000053501 2 1 2 102 3 105485889 105485907 AATTCTTACCCTTTGGCTC 57 105482031 105485823 CTTCAGAAACTACCAAGGC 58 NA Mus musculus 50 F3 ENSMUSG00000028128 ENSMUST00000090417 3 1 2 97 3 121434534 121434552 AATGGTACATTCCTCACCC 58 121434613 121437034 GATGAGTGTTTCTTTCCCG 58 NA Mus musculus 50 Lrrc7 ENSMUSG00000028176 ENSMUST00000106044 1 1 2 80 3 157819888 157823212 TAGAAGGTTAGACAGGAATGC 59 157819828 157819849 ATTGCTGAAATACCTCCATAGG 59 NA Mus musculus 50 Asph ENSMUSG00000028207 ENSMUST00000103004,ENSMUST00000038564,ENSMUST00000029859 3 3 17 80 4 9549362 9551514 GGCTAAAGCTAAAGAACCCA 59 9549301 9549319 CTTCGCTCTTCATTCTTGC 59 NA Mus musculus 50 Pdlim5 ENSMUSG00000028273 ENSMUST00000029941,ENSMUST00000084039 3 2 4 82 3 142015705 142015724 GGGCTCCTTGAATATGACTC 59 141975493 141977375 CCTTAGGTTCACCCTTCTG 59 NA Mus musculus 50 Cd72 ENSMUSG00000028459 ENSMUST00000107925,ENSMUST00000107926,ENSMUST00000030179,ENSMUST00000098105,ENSMUST00000098104 2 5 5 145 4 43463085 43465188 GATTCATCAGACACCTGCT 59 43462958 43462976 GAAGGTTCATCGAATGCTG 58 NA Mus musculus 50 Mier1 ENSMUSG00000028522 ENSMUST00000106858,ENSMUST00000097945,ENSMUST00000030247 1 3 6 80 4 102790906 102799884 CTGTCAAATTACAAGCCATCTG 59 102803592 102803611 TGATGGATCAAACTCATGGT 59 NA Mus musculus 50 Pde4b ENSMUSG00000028525 ENSMUST00000106911,ENSMUST00000030251,ENSMUST00000106907,ENSMUST00000106908,ENSMUST00000106905,ENSMUST00000106904 2 6 9 61 4 102170235 102170253 ATGACCTGATTGTCACTCC 58 102170373 102170391 GTTGTTTCTTACACTTCGC 57 NA DesignNoJunction Mus musculus 50 St3gal3 ENSMUSG00000028538 ENSMUST00000106412,ENSMUST00000097912 2 2 5 84 4 117704475 117780161 AGACTCCAAGTATGATAGGCT 59 117687369 117687387 AAAGTTTGCGTACTTGGTG 58 NA Mus musculus 50 Dock7 ENSMUSG00000028556 ENSMUST00000107015,ENSMUST00000030286 2 2 5 88 4 98660393 98660412 AATTCCTGGGTTAACACTGG 59 98659136 98660342 CTTCGATCCATAGCCTGTG 59 NA Mus musculus 50 2310009E04Rik ENSMUSG00000028573 ENSMUST00000079223,ENSMUST00000107093,ENSMUST00000107091 3 3 8 109 4 95467321 95467339 TGAATGAAGGTGGTCAGAG 58 95478855 95488681 TATACTCTGGCATCTGGCT 59 NA Mus musculus 50 Toe1 ENSMUSG00000028688 ENSMUST00000106455,ENSMUST00000030451 2 2 2 60 4 116478342 116478599 CAATGACAAGGGAGATGAG 57 116478300 116478318 AATCAGTTCAAGGAACAGC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Trim63 ENSMUSG00000028834 ENSMUST00000030638 1 1 2 124 4 133881579 133881597 TAGAACACATAGCAGAGGC 58 133883681 133884830 TCATTGGTGTTCCTCTGTG 59 NA Mus musculus 50 Eif2c3 ENSMUSG00000028842 ENSMUST00000030655 2 1 2 91 4 126045020 126047520 AAATTAGCAGATTGAACCGG 58 126044948 126044966 TTTGATTTCGACTCCTGTG 57 NA Mus musculus 50 Mfn2 ENSMUSG00000029020 ENSMUST00000105716,ENSMUST00000030884,ENSMUST00000105715 2 3 4 81 4 147251186 147252832 AAGTCCAGCAGGAATTGTC 59 147251123 147251144 ATTTCCTGCTCCAGATTATCTC 59 NA Mus musculus 50 Trp73 ENSMUSG00000029026 ENSMUST00000105644,ENSMUST00000030892,ENSMUST00000105641 3 3 7 136 4 153478527 153478938 TGGAGTTCTCTAGAGCCAG 59 153455661 153455679 CTGAGCAAATTGAACTGGG 59 NA Mus musculus 50 Rgs12 ENSMUSG00000029101 ENSMUST00000030984,ENSMUST00000087684 3 2 4 184 5 35317973 35341866 TGATCTTGAGTCTGCAACTG 59 35362126 35362144 CAACAGGATCCTGAAGGAG 59 NA Mus musculus 50 Mtf2 ENSMUSG00000029267 ENSMUST00000112623,ENSMUST00000112628,ENSMUST00000081567 2 3 4 80 5 108529995 108533049 GACTCAAGGGAAGTAAGCA 58 108533093 108533111 TCTTGTATATGGGCCAGGA 59 NA Mus musculus 50 Glmn ENSMUSG00000029276 ENSMUST00000082121,ENSMUST00000078021 1 2 3 80 5 107986985 107987003 CTCTGTTAGACCTGGTCCT 59 107986351 107986943 ATGAAGCCATAATCCTGTCTG 59 NA Mus musculus 50 4631427C17Rik ENSMUSG00000029772 ENSMUST00000101611 1 1 5 67 6 29749452 29749470 AGACTCCAGTAGCTGTACC 59 29749501 29749519 ATCTAAGTCAGGTCCAGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Abcc9 ENSMUSG00000030249 ENSMUST00000100827 1 1 4 122 6 142539017 142543240 GTAACCATAGCTCATCGGG 59 142538913 142538931 AAACACTCCATCTTCCTGG 59 NA Mus musculus 50 Kras ENSMUSG00000030265 ENSMUST00000032399,ENSMUST00000111710,ENSMUST00000111709,ENSMUST00000032397 1 4 4 109 6 145195296 145195314 TAAACTTGTGGTGGTTGGA 58 145182937 145195223 TGTAGGAGTCCTCTATCGT 58 NA InUTR Mus musculus 50 Mlstd1 ENSMUSG00000030303 ENSMUST00000032443,ENSMUST00000111607 2 2 2 80 6 148106465 148107445 GACTCATTATTGCGACTGG 58 148107489 148107507 CAACTGGAATCACATCTGC 58 NA Mus musculus 50 Pira3 ENSMUSG00000030427 ENSMUST00000108605,ENSMUST00000090689,ENSMUST00000038176,ENSMUST00000073970 1 4 4 162 7 3866068 3866089 CAGTATAACATCTCTACAGGGA 58 3864791 3865945 GGAGATTACCTGAGACCAG 58 NA Mus musculus 50 Apba2 ENSMUSG00000030519 ENSMUST00000107507 3 1 3 81 7 71878536 71881776 AGGGTCAAGAATTCTGAGG 58 71881820 71881839 TTAAGACCTTGATCCTCTGG 58 NA Mus musculus 50 Ttc23 ENSMUSG00000030555 ENSMUST00000107471,ENSMUST00000032774,ENSMUST00000072071,ENSMUST00000107470 3 4 4 80 7 74814999 74815018 TGTGGGAACATTGTAAAGGA 59 74815060 74823795 CTGACCTTGATACAACTGTG 58 NA Mus musculus 50 Lrrc28 ENSMUSG00000030556 ENSMUST00000053950,ENSMUST00000085184 1 2 3 80 7 74674520 74674540 CATGTTTACCTTCGTCTATCC 58 74660053 74674478 ATACTTGTCCTCCTCTGGT 59 NA Mus musculus 50 Itgal ENSMUSG00000030830 ENSMUST00000098028 3 1 2 172 7 134453127 134453709 AGTTGGAGGTTACACTGTG 59 134453844 134454153 AAGTAAGATCCGATCTGAGTC 58 NA Mus musculus 50 Gp2 ENSMUSG00000030954 ENSMUST00000079898,ENSMUST00000033255 1 2 2 80 7 126598153 126600686 CAATACATCAAGGTTATGGGAG 58 126598094 126598112 CAGAACTTGGAGAGTCAGG 59 NA Mus musculus 50 Phka2 ENSMUSG00000031295 ENSMUST00000112377,ENSMUST00000112376,ENSMUST00000112380,ENSMUST00000033652 3 4 4 80 X 156961353 156965670 GTTGGAACAGAACGTAGTG 58 156966782 156966801 TTGAACTTCTCCACTTTGTC 57 NA Mus musculus 50 Fgfr1 ENSMUSG00000031565 ENSMUST00000084027 2 1 2 81 8 26666237 26668211 AATGTCTCAGATGCACTCC 59 26668256 26668274 TGTTGTCCGTCTCTTTCTC 59 NA Mus musculus 50 Carm1 ENSMUSG00000032185 ENSMUST00000034703,ENSMUST00000115395 3 2 2 80 9 21391650 21391744 CTTCTTCAGGTACACAGGT 58 21391788 21391806 GTGTTCCACATATTCTCCG 57 NA Nonspecific Mus musculus 50 Nmnat3 ENSMUSG00000032456 ENSMUST00000112935,ENSMUST00000035031,ENSMUST00000112938 2 3 4 62 9 98254576 98299885 CCAAACAGGAAGGTACCAG 59 98299910 98299929 TTCCCATAGCTGTCATTGAC 59 NA DesignRelaxed Mus musculus 50 Kif9 ENSMUSG00000032489 ENSMUST00000061155,ENSMUST00000084948,ENSMUST00000084952,ENSMUST00000111923 1 4 5 80 9 110420157 110420177 ATCAAGCAGGAGATTGATGAG 59 110420219 110421552 GTTCTCGTACTCTCCTTGC 59 NA Mus musculus 50 Arpp21 ENSMUSG00000032503 ENSMUST00000084898 2 1 6 107 9 112021765 112021783 TACCCTACCTCAACCTCAC 59 112019261 112021694 AATCATCAAACCTGCTTGC 59 NA Mus musculus 50 Sfrs12 ENSMUSG00000032621 ENSMUST00000109322 1 1 2 151 13 104554086 104559414 TAGTTCCTTGTGCAGAAGG 59 104551266 104553972 AACACCAAGACTACTCACTG 59 NA Mus musculus 50 Gtf3c1 ENSMUSG00000032777 ENSMUST00000106423 3 1 2 151 7 132790243 132791925 CCAGTCATACTACAACTTGG 57 132790111 132790129 AGTAACCTCTCATCAGCAG 58 NA Mus musculus 50 Ank2 ENSMUSG00000032826 ENSMUST00000043741,ENSMUST00000044443 1 2 5 80 3 126656111 126656129 GCAACTTAAACATCACCCT 57 126653662 126655413 ATGTCATACCGATCTCTTCC 58 NA Mus musculus 50 Pwp2 ENSMUSG00000032834 ENSMUST00000042556 2 1 2 80 10 77644305 77644323 TCTACTATGCACTGAGTGG 58 77644011 77644262 TGAGCGAGTATAGATCTAGG 57 NA Mus musculus 50 Nol12 ENSMUSG00000033099 ENSMUST00000041164 2 1 1 85 15 78770563 78770581 CCAGGAAGTCCAAAGATCC 59 78770923 78770941 CTTGACCTTCTTCCGACTG 59 NA DesignNoJunction Mus musculus 50 Vps8 ENSMUSG00000033653 ENSMUST00000115397,ENSMUST00000042520,ENSMUST00000096191 3 3 4 85 16 21540167 21543344 ATTGGACAGCTTCAGAACC 59 21554152 21554171 TCCTGATTGACATGAACACC 59 NA Mus musculus 50 Rhbdd3 ENSMUSG00000034175 ENSMUST00000036320,ENSMUST00000101610,ENSMUST00000109878 1 3 3 154 11 5005709 5005809 GTCTTCTCTAAGGCTGCAG 59 5005927 5005945 TACTCCTTCCCTCAGTCAC 59 NA InUTR Mus musculus 50 Exosc1 ENSMUSG00000034321 ENSMUST00000075280,ENSMUST00000112123 2 2 2 80 19 41999251 41999269 CACAGTCCAATTACCTGCT 59 41998567 41999207 CCATCTGAACACCTGACTC 59 NA Mus musculus 50 OTTMUSG00000008540 ENSMUSG00000034359 ENSMUST00000038386,ENSMUST00000106560 2 2 4 84 4 112312301 112318020 CTTATATGGTACCTTCTCTAAGGG 59 112318062 112318081 TCCTGTAACTGCAATCACTG 59 NA Mus musculus 50 Zxdc ENSMUSG00000034430 ENSMUST00000075117 3 1 3 122 6 90332504 90334170 GTCTCTACTTGGAAAGTGGG 59 90348764 90348782 CTTTCCTGTGAGCAGAGTC 59 NA Nonspecific Mus musculus 50 Pof1b ENSMUSG00000034607 ENSMUST00000039887,ENSMUST00000113391 3 2 2 82 X 109775479 109777766 CACGAACAGGTGATAATTCAG 59 109775417 109775435 CGACTTAGATCAGCAAGCA 59 NA Mus musculus 50 Map2k2 ENSMUSG00000035027 ENSMUST00000105331,ENSMUST00000048223 1 2 3 97 10 80583841 80584651 TACATAGTGAACGAGCCAC 59 80585313 80585332 TCTGCTGGGTTCTTAATGAG 59 NA Mus musculus 50 Mid1 ENSMUSG00000035299 ENSMUST00000112104,ENSMUST00000112107,ENSMUST00000112108,ENSMUST00000036753,ENSMUST00000112105,ENSMUST00000078947 1 6 7 156 X 166404083 166414865 ATGTTGAAGTCAATGCATCC 58 166419839 166419857 CAGTTTGCAATCTGCTGAG 59 NA Mus musculus 50 Nfkbiz ENSMUSG00000035356 ENSMUST00000114457,ENSMUST00000114458,ENSMUST00000036273 2 3 4 80 16 55815802 55815820 TAAGGAATAAGAGCCTGGT 57 55814452 55815758 CACTCTTACGATCCTTTGC 58 NA Mus musculus 50 Dos ENSMUSG00000035640 ENSMUST00000105369,ENSMUST00000105368 2 2 2 169 10 79597504 79597871 GGCATTTCGTTAGATGCAG 59 79597353 79597372 TTCTTGACCTTGAAGTAGGG 58 NA Mus musculus 50 Prkx ENSMUSG00000035725 ENSMUST00000036333 1 1 2 115 X 75009985 75010702 CTAGGCAACATGAAGAATGG 58 75009571 75009589 GATAACTTGGGCACAATGG 58 NA Mus musculus 50 Tmem161b ENSMUSG00000035762 ENSMUST00000057495,ENSMUST00000050885 1 2 2 191 13 84362039 84397386 GTTTGAGATGGTATCAACATCC 59 84399836 84411784 AATGCAGTGCTAAAGTGTC 58 NA Mus musculus 50 Twist1 ENSMUSG00000035799 ENSMUST00000049089 3 1 1 208 12 34643317 34643335 TACATCGACTTCCTGTACC 58 34644037 34644056 CCTTCTCTGGAAACAATGAC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rbm43 ENSMUSG00000036249 ENSMUST00000102768,ENSMUST00000102767,ENSMUST00000039138 2 3 3 99 2 51782262 51782280 TTGCACAAGACTTCATCAG 57 51781435 51781454 GCCATCACATAGTTGAAGAC 58 NA DesignNoJunction Mus musculus 50 Exoc1 ENSMUSG00000036435 ENSMUST00000113493,ENSMUST00000087133 1 2 3 89 5 76983220 76986852 CAAGAAGTTTGCTACACTGC 59 76988044 76988062 GATCCAGTGAGTTTCCCAG 59 NA Mus musculus 50 March1 ENSMUSG00000036469 ENSMUST00000110258,ENSMUST00000110259,ENSMUST00000098708,ENSMUST00000072482,ENSMUST00000110253 1 5 7 91 8 68980086 68992135 AGGTAACGACAATGGTGTG 59 68992188 68992208 CATACATGAAGACGAGACCTC 59 NA Nonspecific Mus musculus 50 Piwil4 ENSMUSG00000036912 ENSMUST00000115644 1 1 4 80 9 14531959 14533095 CAGTACAAATTGTCCCTGTG 58 14531898 14531916 CACGTCAGCATTGAATAGG 58 NA Mus musculus 50 Paip2 ENSMUSG00000037058 ENSMUST00000115737,ENSMUST00000115736,ENSMUST00000041314,ENSMUST00000115735,ENSMUST00000115734 1 5 5 84 18 35773088 35773106 ATGGACCAAATCCAAGACC 59 35773154 35775868 TCAGATTGCTCTTGACCAC 59 NA Mus musculus 50 Man1c1 ENSMUSG00000037306 ENSMUST00000038628,ENSMUST00000105864,ENSMUST00000054096 2 3 3 82 4 134131904 134131922 TCAAGTCCTGGTTGATGTC 59 134125016 134131858 ATAGGTCTCTATGGCCTCC 59 NA Mus musculus 50 Ddhd1 ENSMUSG00000037697 ENSMUST00000087320,ENSMUST00000111828,ENSMUST00000045646 2 3 4 90 14 46218852 46221249 GACTCCGCATATTTCAGAC 57 46218780 46218799 GGCTATCATCTTTACTCTGC 57 NA Mus musculus 50 B3bp ENSMUSG00000037795 ENSMUST00000113738,ENSMUST00000087264 3 2 3 107 5 66216537 66216556 TATCTGTCGGTGATTACTGG 58 66216626 66217853 TTCAGAGAACCTGAAGCTG 59 NA Mus musculus 50 Sirpa ENSMUSG00000037902 ENSMUST00000103203,ENSMUST00000049262,ENSMUST00000103202 1 3 5 80 2 129434986 129441190 CTATGTACTCGCCAAACCT 59 129441233 129441252 GTGAAGTTCACTTTCTGGTC 58 NA Mus musculus 50 Tmem16k ENSMUSG00000037949 ENSMUST00000042546,ENSMUST00000111499 2 2 2 82 9 122166223 122166241 TAAAGTCTGAGGTCGACAC 58 122162231 122166177 ATCATCAAAGGTTCCCAGG 59 NA Mus musculus 50 Mllt6 ENSMUSG00000038437 ENSMUST00000107586,ENSMUST00000044730 2 2 2 82 11 97531658 97533781 CTGATAAGGTCTCCTCAGC 58 97533827 97533845 CTTTGAGTCCCTGCTACTC 59 NA Mus musculus 50 Polg ENSMUSG00000039176 ENSMUST00000073889,ENSMUST00000036427 3 2 2 161 7 86605278 86605402 GATCTCATCTTGGGACTGG 59 86605010 86605153 TACTGCATCAGATCCTGGA 59 NA Mus musculus 50 Tsga10ip ENSMUSG00000039330 ENSMUST00000044527 1 1 1 193 19 5390951 5390969 AAGGTATCCAGCATAGGGT 59 5390179 5390197 TCTAAGTGATCGGTTGCTC 59 NA DesignNoJunction Mus musculus 50 Exosc2 ENSMUSG00000039356 ENSMUST00000038474,ENSMUST00000113464 1 2 2 80 2 31532244 31533977 GAAATATGGGAAGCTAGGTC 57 31534019 31534038 TCATGGAAATGAGTCTTCTG 57 NA Mus musculus 50 Zdhhc2 ENSMUSG00000039470 ENSMUST00000049389,ENSMUST00000110479 1 2 2 105 8 41531144 41532409 ACATTGGTGAACAAGTTGTG 59 41532477 41532495 TTTGAAGGATTCATGGGCA 59 NA Mus musculus 50 2410089E03Rik ENSMUSG00000039801 ENSMUST00000110617 2 1 3 81 15 8169324 8169343 ATTCTTACCTCCTTATGGCT 57 8169384 8170867 GCTCTAGAACCTTAATAATGCC 58 NA Mus musculus 50 Flywch1 ENSMUSG00000040097 ENSMUST00000045517,ENSMUST00000115465,ENSMUST00000086325 1 3 3 83 17 23897214 23897232 AGGATTGGAGACTCTGAGG 59 23893756 23893774 GTCTTTAGGAACTCAGGCC 59 NA DesignNoJunction Mus musculus 50 Ppp1ca ENSMUSG00000040385 ENSMUST00000046094,ENSMUST00000113866 1 2 2 90 19 4194609 4194627 TGTCTCCTTTACCTTTGGG 58 4194681 4194780 TTCTACAACCTGATGTGCT 58 NA Mus musculus 50 Akap9 ENSMUSG00000040407 ENSMUST00000044492,ENSMUST00000088917 2 2 2 80 5 4067855 4067874 GGAGCATTGTCATAAAGCTG 59 4067915 4069019 AGAACCTAGAACAACAGTCTC 59 NA Mus musculus 50 5330417C22Rik ENSMUSG00000040412 ENSMUST00000048012 3 1 2 107 3 108284282 108284712 GGAATTCCACAGTGTTGAG 58 108284193 108284211 ATGTTTCTAACAAGCACGG 58 NA Mus musculus 50 Dtx3 ENSMUSG00000040415 ENSMUST00000116230,ENSMUST00000038217,ENSMUST00000116229 1 3 3 160 10 126630403 126630793 GGATCAAATGTCGTTCGTC 58 126630261 126630280 CATCTATGAGGATGGACACC 59 NA InUTR Mus musculus 50 4933426K21Rik ENSMUSG00000040649 ENSMUST00000079990,ENSMUST00000068242 2 2 2 149 6 122414030 122414048 ATTCCAAGAGTTAGCTGGC 59 122409304 122410987 ACAGCTTTGCCTCTATGAC 59 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000099723,ENSMUST00000111369,ENSMUST00000111373 2 3 17 87 2 90998620 90998638 ATCAAGACTCTGTCATCGG 58 90998287 90998570 GAACTATTACTCACGGTGCT 59 NA Mus musculus 50 Erg ENSMUSG00000040732 ENSMUST00000113848,ENSMUST00000077773 1 2 4 105 16 95600721 95600739 TAATGCATGCCAGAAACAC 58 95591658 95598914 TCATAAGGTAAATCTGGCCT 58 NA Mus musculus 50 Iqsec2 ENSMUSG00000041115 ENSMUST00000112605,ENSMUST00000080074 2 2 3 142 X 148656283 148656301 GTCTGGAGGACACTTATGG 59 148656868 148657476 AATAACAGACCCTTCGATGG 59 NA Mus musculus 50 Arhgap11a ENSMUSG00000041219 ENSMUST00000040215,ENSMUST00000102545 3 2 5 109 2 113674614 113674947 TTGCTAAAGAAAGGCTCAG 57 113674523 113674541 GAATTACTGGGTTCTGTCC 57 NA Mus musculus 50 Osbpl6 ENSMUSG00000042359 ENSMUST00000111929,ENSMUST00000077972,ENSMUST00000090784 2 3 5 96 2 76394026 76398247 AAATACAGCTCCAGGAAGG 58 76398307 76402848 AAAGGAACTGTTGTAGCCA 59 NA Mus musculus 50 Pnpla1 ENSMUSG00000043286 ENSMUST00000056866,ENSMUST00000114737 1 2 2 80 17 29022579 29023798 GCTAGCAAACTGAAGTCTG 58 29023841 29023860 ATGAGGTTTATAGGTGACCC 58 NA Mus musculus 50 C230094A16Rik ENSMUSG00000044072 ENSMUST00000058902,ENSMUST00000109452 1 2 3 80 11 29750861 29750879 CCAGATGGATCTCAGTTGG 59 29749053 29750820 AACGACTTCTGTCATATCTCTG 59 NA Mus musculus 50 Zfp758 ENSMUSG00000044501 ENSMUST00000088765,ENSMUST00000072477,ENSMUST00000088764 3 3 3 191 17 22510692 22510711 ACATGGATGTTATGTTGGAG 57 22511883 22511901 AAGGTGTACTTTGACTGGA 58 NA DesignNoJunction Mus musculus 50 Pwwp2a ENSMUSG00000044950 ENSMUST00000061070,ENSMUST00000109280 2 2 3 60 11 43519138 43519158 CTAAATCAGGAGACATCTGAC 57 43519180 43519198 CATCCATGCTATCAATGCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cetn4 ENSMUSG00000045031 ENSMUST00000071400 1 1 3 94 3 37208401 37209230 TCTGAAAGAACTGAAGAGTG 57 37208326 37208344 TTAGTGATATGCTTCCCGT 58 NA Nonspecific Mus musculus 50 Hs6st1 ENSMUSG00000045216 ENSMUST00000088174 1 1 1 60 1 36160364 36160382 CTACTACATCACCCTGCTG 59 36160406 36160424 TACATGTCGCCATTCACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Wdr81 ENSMUSG00000045374 ENSMUST00000051512 1 1 2 88 11 75257817 75257835 CATGGTGCTCCTAGATACC 58 75255582 75257765 CCTCTACAGCCTTGATCTG 59 NA Mus musculus 50 Trim39 ENSMUSG00000045409 ENSMUST00000042717,ENSMUST00000113706 1 2 4 99 17 36397863 36398451 CTTAAACAGCTAATTGCGGA 58 36397783 36397801 TTGTCTCCACAAACTTGAC 57 NA Mus musculus 50 Serinc4 ENSMUSG00000046110 ENSMUST00000056312,ENSMUST00000067823 2 2 3 80 2 121279498 121279516 AAGCCTCTATCATCAGCTG 58 121279336 121279455 GAAAGGTTATTGTCTCTGGG 57 NA Mus musculus 50 Mapk10 ENSMUSG00000046709 ENSMUST00000112847,ENSMUST00000112848,ENSMUST00000060871,ENSMUST00000112846,ENSMUST00000100980 2 5 7 85 5 103418694 103418712 GATGACTCCGTATGTGGTG 59 103416282 103418645 ACCATATGTCCACGTTCTC 59 NA Mus musculus 50 Ngrn ENSMUSG00000047084 ENSMUST00000061677 3 1 1 60 7 87409331 87409349 ACTGATGTTATCCGAAGGG 58 87409371 87409391 TCAGTTTCTGCTCTAAAGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ubiad1 ENSMUSG00000047719 ENSMUST00000051633 1 1 1 60 4 147818085 147818104 TCTGAAATTGGAACACTTGG 58 147818044 147818062 GTAGAGAAAGGAGCCAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ankfn1 ENSMUSG00000047773 ENSMUST00000052158 1 1 1 80 11 89302092 89302110 CATATCCATGTCCTCGTCC 59 89296142 89302051 CCAAGTAAATTCTGTAGCTGAG 58 NA Mus musculus 50 Tshz2 ENSMUSG00000047907 ENSMUST00000099062,ENSMUST00000109159,ENSMUST00000109157,ENSMUST00000087966 1 4 4 60 2 169710317 169710336 TAAGCCATCAAGTAACTCCC 59 169710358 169710377 TTCTTTCTTTAACTCGGTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Krt35 ENSMUSG00000048013 ENSMUST00000103127,ENSMUST00000038839 2 2 2 83 11 99955963 99956175 CAGGACCAAGTATGAGACTG 59 99955899 99955917 AGATCATCCAGGATTCTGC 58 NA Mus musculus 50 Tex18 ENSMUSG00000048477 ENSMUST00000053363 1 1 1 60 10 86377157 86377175 ATCATTGCCCTTTGATGTG 58 86377199 86377217 CACACCCTGGATACTTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Armcx6 ENSMUSG00000050394 ENSMUST00000052431,ENSMUST00000113194 1 2 2 120 X 131285484 131285502 TGGGATTCATCCTGATCCT 59 131284747 131285092 GCGATTCTTGTCATGAATCTC 59 NA InUTR Mus musculus 50 Gdf6 ENSMUSG00000051279 ENSMUST00000057613 1 1 1 60 4 9786524 9786542 TTGATGTGTCCACACTCTC 59 9786566 9786584 CGATAAAGCCTTAGCTCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ccnb3 ENSMUSG00000051592 ENSMUST00000115753 2 1 3 80 X 6582468 6586957 CCATCATTGAGGAGATAACC 57 6582407 6582425 TCAATAATGGATCTTGGCC 57 NA Mus musculus 50 Tmem198 ENSMUSG00000051703 ENSMUST00000113575,ENSMUST00000050899 3 2 2 194 1 75479711 75480959 ACACAGAAGTCGTCATCAG 59 75481117 75481135 CATTGAAGCGTTTGATGGG 59 NA Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000099981,ENSMUST00000070199,ENSMUST00000086376 3 3 14 81 2 76664183 76664201 GAGCCTAAGAAGGTTGTCC 59 76663922 76664138 GCACCTCAGGTACTTTAGG 59 NA Mus musculus 50 Rnf133 ENSMUSG00000051956 ENSMUST00000115354 2 1 2 60 6 23599574 23599593 TGGTAACATCAAAGGTATGG 57 23599533 23599552 GACTGTAACATGAACTCCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trpm3 ENSMUSG00000052387 ENSMUST00000099564,ENSMUST00000087569 2 2 7 80 19 22824322 22841129 ATTAGACCCAATTGGAATCG 57 22841171 22841190 ACAATTGAGATCACATTGGG 58 NA Mus musculus 50 Nrk ENSMUSG00000052854 ENSMUST00000064937 2 1 2 127 X 135509232 135509679 CACAAGGAGATTCAGAGGG 59 135509770 135509788 CTTCTTGATCAGGTAGCCA 58 NA Mus musculus 50 Jam2 ENSMUSG00000053062 ENSMUST00000098407 1 1 2 268 16 84807180 84809602 TCTCCAAGGTGACTTTAAAGAC 59 84809831 84809849 TGTAATACCATCCAGGCTG 58 NA DesignRelaxed Mus musculus 50 Abca15 ENSMUSG00000054746 ENSMUST00000076272,ENSMUST00000098078 3 2 2 84 7 127483753 127484064 CCGATTAAAGGAATACCAGC 58 127484111 127484129 ATACAGACAGAGGAAGGTG 57 NA Mus musculus 50 Centg2 ENSMUSG00000055013 ENSMUST00000027521 1 1 2 116 1 91640462 91662890 CCAAATTCAGGGAATGTCAC 59 91662969 91662987 ACTGGAGACTGAGTAGGAG 59 NA Mus musculus 50 Cstl1 ENSMUSG00000055177 ENSMUST00000068607,ENSMUST00000109955,ENSMUST00000109952 1 3 4 143 2 148576877 148580347 AAGGTCAGATGCAGTTGAC 59 148581000 148581018 GTGATTTGCAAATCAGGCT 59 NA Mus musculus 50 4933421E11Rik ENSMUSG00000056260 ENSMUST00000106737 3 1 5 68 3 106535491 106535509 ACACCTCTGTTGAATACCA 58 106536042 106536060 CTGTGATTCTTGGTCTCTG 57 NA DesignNoJunction Mus musculus 50 Tyw1 ENSMUSG00000056310 ENSMUST00000044204,ENSMUST00000040213,ENSMUST00000100662 2 3 3 103 5 130734913 130738695 ATCAAGAAGCAGGTCACTC 59 130738761 130738780 ATCTTCACTCCAGAAACGTG 59 NA Mus musculus 50 Gpr116 ENSMUSG00000056492 ENSMUST00000046665 1 1 2 80 17 43574626 43576634 ACCTCTGTAGGAGATAATGC 58 43576676 43576695 CTGAACTGTACTCACTTCCA 58 NA Mus musculus 50 Capg ENSMUSG00000056737 ENSMUST00000071044,ENSMUST00000114073,ENSMUST00000114072,ENSMUST00000114071 3 4 4 83 6 72508243 72508744 CTGTATAAGGTCTCTGATGCC 59 72508789 72508807 AATTAGCAGTTCAGAGGCA 58 NA Mus musculus 50 Capg ENSMUSG00000056737 ENSMUST00000071044,ENSMUST00000114073,ENSMUST00000114072,ENSMUST00000114071 3 4 4 83 6 72508243 72508744 CTGTATAAGGTCTCTGATGCC 59 72508789 72508807 AATTAGCAGTTCAGAGGCA 58 NA Mus musculus 50 Homez ENSMUSG00000057156 ENSMUST00000081162,ENSMUST00000059770 3 2 2 60 14 55476622 55476640 GCCCACTCATATGAAAGGA 59 55476580 55476598 CAGCTGTGATACCTGAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Scn3a ENSMUSG00000057182 ENSMUST00000100069,ENSMUST00000066432,ENSMUST00000045256 3 3 3 143 2 65335536 65335554 CCTTCCTGATAGTGTTCCG 59 65333438 65335429 GGAAGAGGTTCAGAACCAC 59 NA DesignRelaxed Mus musculus 50 Zfp595 ENSMUSG00000057842 ENSMUST00000109735,ENSMUST00000012944 3 2 2 68 13 67421791 67421809 TACAGAGATGTGATGCTGG 58 67421281 67421299 ATATGGCTTAGTGGAAGCA 58 NA DesignNoJunction Mus musculus 50 Fgf18 ENSMUSG00000057967 ENSMUST00000109363,ENSMUST00000020507 2 2 2 113 11 33024693 33024712 CCTAGTGGAGACAGATACCT 59 33018018 33024617 CTAGTACCATCAGGCTTCC 58 NA InUTR Mus musculus 50 Sema3b ENSMUSG00000057969 ENSMUST00000102532,ENSMUST00000073448,ENSMUST00000102529,ENSMUST00000102531,ENSMUST00000102530 3 5 5 80 9 107502872 107503173 TCTTCATTGGTACAGATGTG 57 107502811 107502831 GAAGTCCTTCAGAATTAGGTC 57 NA Mus musculus 50 Sept9 ENSMUSG00000059248 ENSMUST00000093907,ENSMUST00000106351,ENSMUST00000106354,ENSMUST00000019038,ENSMUST00000106352,ENSMUST00000100193,ENSMUST00000106349 3 7 7 82 11 117213584 117213931 CACCCACGATATTGAAGAG 57 117213977 117213995 CATTGTTGATGTGGTCTCC 58 NA Mus musculus 50 Eda ENSMUSG00000059327 ENSMUST00000113778,ENSMUST00000113781 3 2 9 104 X 97590393 97590412 ATCACTATGAACCCTAAGGT 57 97590478 97592258 GTTGATGTAGTAGACCTGAC 57 NA Mus musculus 50 Max ENSMUSG00000059436 ENSMUST00000110395,ENSMUST00000082136 2 2 2 77 12 78054188 78054206 GACAGCTTTCACAGTTTGC 59 78041051 78041069 TTTGTCTAGGATTTGGGCC 59 NA DesignNoJunction Mus musculus 50 Suv420h2 ENSMUSG00000059851 ENSMUST00000098853,ENSMUST00000108582,ENSMUST00000076059,ENSMUST00000108583 2 4 4 88 7 4697527 4697684 TATACCTGTGAGAGGAAAGG 57 4697735 4697753 AGCTCATACTTGTCTAGGG 57 NA Mus musculus 50 Ntng1 ENSMUSG00000059857 ENSMUST00000106573 2 1 6 95 3 109630676 109654699 CATTTCCAGTATCGGTAAGTG 58 109630601 109630620 GTTGTTCCAGTCTTACACTC 58 NA Mus musculus 50 Arrb2 ENSMUSG00000060216 ENSMUST00000079056,ENSMUST00000108568,ENSMUST00000102564,ENSMUST00000084954,ENSMUST00000102563 2 5 5 80 11 70253395 70253672 AATTCGATACCAACTATGCC 57 70253715 70253733 CATCCTTCATTCCCTTCAG 57 NA Mus musculus 50 Nr1h2 ENSMUSG00000060601 ENSMUST00000107912,ENSMUST00000073488,ENSMUST00000107911,ENSMUST00000107910 3 4 4 83 7 51806205 51806696 ACCATTGAGATCATGTTGC 58 51806140 51806158 GTAGGTGAAGTCCTTCAGG 58 NA Mus musculus 50 Arl1 ENSMUSG00000060904 ENSMUST00000095348 1 1 3 93 10 88199879 88199897 TATGTCGTTGACAGTTGTG 57 88204658 88204738 ATTTGCCATTTCTCAGCTC 58 NA Mus musculus 50 Zfp26 ENSMUSG00000063108 ENSMUST00000056684 2 1 2 82 9 20242873 20243975 GATGCAACTGATGTTTCCC 59 20242807 20242827 GCTGATTAACGAAAGTTTCCC 59 NA Mus musculus 50 Kcnma1 ENSMUSG00000063142 ENSMUST00000112423 1 1 4 80 14 24125966 24128271 ACAAACAGAATGCAACAAGG 59 24119226 24119244 GATAGGCATTATCCGGCTC 59 NA Mus musculus 50 Rpl27 ENSMUSG00000063316 ENSMUST00000077856,ENSMUST00000107249 2 2 3 67 11 101304930 101304949 CCAAGATCAAGTCCTTTGTG 58 101304979 101306546 ATCCACAGAGTACCTTGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Oog2 ENSMUSG00000066030 ENSMUST00000105758,ENSMUST00000080405 3 2 2 81 4 143784123 143784142 CTTAGACACTTTGAAGGCTG 58 143784186 143784727 TCTGAGTTTGCACCTACTG 59 NA Nonspecific Mus musculus 50 Es31 ENSMUSG00000069922 ENSMUST00000093223 2 1 2 80 8 107577341 107579491 TCACGAAGTTCTGGAATATCC 59 107579530 107579551 CTAATAAGGGCCTTGAATTCTC 58 NA Mus musculus 50 Ganab ENSMUSG00000071650 ENSMUST00000096246 2 1 2 92 19 8981805 8981823 CTAGAAGATCGAAGCCTCC 58 8981879 8982353 TTTATCCGAGAAAGGGACC 58 NA Mus musculus 50 TRAV9D-2 ENSMUSG00000076806 ENSMUST00000103617 1 1 1 60 14 53823040 53823059 TATCTGTTCTGGTATGTCCA 57 53823081 53823100 AATAGTACTTGAGGAGCAGC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 2210418O10Rik ENSMUSG00000078894 ENSMUST00000099009 1 1 2 93 2 175459298 175459317 CCTATAGGAATCTCACAGCT 57 175457864 175459037 CTTTCATGCCTTCCATGAC 58 NA Nonspecific Mus musculus 50 Capn3 ENSMUSG00000079110 ENSMUST00000110721,ENSMUST00000028748,ENSMUST00000090028 2 3 7 94 2 120311000 120311018 TTGAGATCAAGGATGCTCC 59 120311075 120313818 AACAATTGTGTCAATGGAGC 59 NA Mus musculus 50 Ankrd39 ENSMUSG00000079610 ENSMUST00000001172 3 1 1 114 1 36599647 36599666 TATTTCATCCAGAAGGCCAC 59 36598853 36598871 CACTTTCCAGCAGAAACTG 58 NA DesignNoJunction Mus musculus 50 mmu-mir-669a-1 ENSMUSG00000076025 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 B9d1 ENSMUSG00000001039 ENSMUST00000102657,ENSMUST00000001066 3 2 2 135 11 61323019 61325877 TACAGAAGTTCACAAGCTGG 59 61326187 61326205 GTCACCACATTGAAGAGGA 59 NA Mus musculus 50 Gnmt ENSMUSG00000002769 ENSMUST00000002846 1 1 1 124 17 46862913 46863020 CCTGGCTTCAGTAAGTTCC 59 46862807 46862825 TTGTAGGGCTTGAAGTCAC 59 NA Mus musculus 50 Pih1d1 ENSMUSG00000003423 ENSMUST00000107813,ENSMUST00000085375,ENSMUST00000107811 2 3 3 94 7 52414684 52415054 GACCTTCCTAAACTGGACG 59 52415111 52415130 TCCAGATGATACAGTTGCTG 59 NA Mus musculus 50 Zfp324 ENSMUSG00000004500 ENSMUST00000038701 2 1 1 88 7 13554263 13554723 CTCCATAGGACCTTCTGTC 58 13554774 13554793 CTCTATTTGTCCTGTTGGGA 59 NA Mus musculus 50 Hnrnpa2b1 ENSMUSG00000004980 ENSMUST00000114459,ENSMUST00000069949,ENSMUST00000116609,ENSMUST00000090002 1 4 4 178 6 51416368 51416387 CATAAATGGTCACAATGCAG 57 51415229 51416147 TTCCGTATCCATCAGATCC 58 NA Mus musculus 50 Ripk4 ENSMUSG00000005251 ENSMUST00000019386 1 1 1 95 16 97971742 97973111 GATGTATACAGCTTCGCCA 59 97969754 97969775 CACTTTCATCATGATGTGTAGG 59 NA Nonspecific Mus musculus 50 Insr ENSMUSG00000005534 ENSMUST00000091291 2 1 1 80 8 3204770 3211389 AATTCCAGCAACTTGATGTG 59 3204709 3204727 AATGGTCTTCTCACCTTCG 59 NA Mus musculus 50 Nelf ENSMUSG00000006476 ENSMUST00000116574,ENSMUST00000114388,ENSMUST00000114386,ENSMUST00000114392,ENSMUST00000100334,ENSMUST00000006646,ENSMUST00000102931,ENSMUST00000074422,ENSMUST00000114381 1 9 9 80 2 24916645 24916787 GAGGACATGATCCACTTCTG 59 24916829 24916848 CATGATGTGGATGACATTCG 59 NA Mus musculus 50 Cdk4 ENSMUSG00000006728 ENSMUST00000006911 1 1 1 80 10 126501707 126501725 TATAGACCAGGACCTGAGG 59 126501767 126501901 CGCATTAGATCCTTAATGGTC 58 NA Mus musculus 50 Tmco6 ENSMUSG00000006850 ENSMUST00000007046 2 1 1 81 18 36898037 36898055 GAAGCACTTGGATATGCCT 59 36898099 36898298 TGGAATCCAGAATAGAGGGA 59 NA Mus musculus 50 Stambp ENSMUSG00000006906 ENSMUST00000068054 3 1 1 87 6 83514247 83520311 CAACAAGTACATCACGCTG 59 83514178 83514197 GACAGCATCTTTCTTCTCAG 58 NA Mus musculus 50 Eif1b ENSMUSG00000006941 ENSMUST00000007139 1 1 1 89 9 120403741 120404035 AGTTTCTTCTGGAGGTTGG 59 120404088 120404106 ATTTAAGAAACTCGCCACG 58 NA InUTR Mus musculus 50 Tinf2 ENSMUSG00000007589 ENSMUST00000100536,ENSMUST00000007733 2 2 3 125 14 56299719 56299837 GGAACTAGAACAAGACTATGGG 59 56299528 56299634 CTTAGAGCATCCTGAAGCTC 59 NA Mus musculus 50 Pou6f1 ENSMUSG00000009739 ENSMUST00000073837,ENSMUST00000108918,ENSMUST00000058274 1 3 3 141 15 100410421 100410439 ACTTAGAAGAGATCCGGGA 58 100409041 100410316 TTCTCAAACCTGCAGATGG 59 NA Mus musculus 50 Pax5 ENSMUSG00000014030 ENSMUST00000107827,ENSMUST00000107826,ENSMUST00000014174,ENSMUST00000102932,ENSMUST00000107825 3 5 5 80 4 44692432 44695550 CACAGCATAGTGTCTACAG 57 44692370 44692388 ACTGATGGAGTATGAGGAG 57 NA Mus musculus 50 4931428F04Rik ENSMUSG00000014837 ENSMUST00000014981 1 1 1 109 8 107809066 107809166 TCATGAATCAGGCAGTTGG 59 107808975 107808993 CCAAATTTGGCACTTGGTC 59 NA Mus musculus 50 Gadd45b ENSMUSG00000015312 ENSMUST00000015456 2 1 1 80 10 80393279 80393777 CCAAACTGATGAATGTGGAC 59 80393820 80393838 GAGCGATATCATCCTCCTC 58 NA Mus musculus 50 Cyb5r3 ENSMUSG00000018042 ENSMUST00000018186,ENSMUST00000057383 3 2 2 85 15 82992716 82992734 GTCATCAGTCCTGACACTC 59 82992374 82992668 TAGATGTGTTGGCCAATAGG 59 NA Mus musculus 50 Adora2b ENSMUSG00000018500 ENSMUST00000018644 2 1 1 70 11 62062876 62062895 CTCCATCTTTAGCCTCTTGG 59 62062928 62078571 CTTTATACCTGAGCGGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ikzf1 ENSMUSG00000018654 ENSMUST00000109674,ENSMUST00000018798,ENSMUST00000048122 1 3 9 178 11 11600254 11607798 AGTTTCAGGAAAGGAGAGC 59 11654042 11654060 CTTTCTGGGTAAAGGAGGC 59 NA Mus musculus 50 Cpsf4l ENSMUSG00000018727 ENSMUST00000018872,ENSMUST00000116323 2 2 5 67 11 113570157 113570707 ATGGACAAGTCCAGTTCAG 59 113567874 113570126 CATAGCATCCCTTTCACAC 58 NA DesignRelaxed Mus musculus 50 Ubxd1 ENSMUSG00000019578 ENSMUST00000019722 1 1 1 131 17 56210141 56210319 TATCGCCAAATACCTGGAC 59 56209152 56209170 ATGGCTTCAAAGAACTCGT 59 NA Mus musculus 50 Lama4 ENSMUSG00000019846 ENSMUST00000019992 3 1 1 80 10 38808248 38808575 ACTTTACCAGGTTGGATAGAG 58 38808616 38808635 ACTCATAGAGTGAAGTGTGG 58 NA Mus musculus 50 Asf1a ENSMUSG00000019857 ENSMUST00000020004 3 1 1 107 10 53322254 53325918 TATGTTTGTGTTTCAGGCTG 58 53325988 53326006 AATTCTTGACCTCGGTAGG 58 NA Mus musculus 50 Rhobtb1 ENSMUSG00000019944 ENSMUST00000020101,ENSMUST00000067908 1 2 2 92 10 68733539 68733557 TATGAACCAGGAGATCACG 58 68733613 68735496 AATGTCACGTCTGAGAAGG 59 NA Mus musculus 50 Zpbp ENSMUSG00000020193 ENSMUST00000020413 3 1 1 82 11 11359749 11359767 GACTGCCAAGAAGTATCCA 58 11318274 11359705 CATAACATATACGCTCACAGG 58 NA Mus musculus 50 Timm10 ENSMUSG00000020219 ENSMUST00000020440 3 1 1 127 10 80363405 80363423 TATGGAGCAGGTGAAAGTG 59 80363001 80363242 ATTTCTGCTCCGAGTTATCC 59 NA DesignNoJunction Mus musculus 50 4933427D14Rik ENSMUSG00000020807 ENSMUST00000021162,ENSMUST00000108506,ENSMUST00000108505 1 3 3 83 11 72015963 72015981 CATGTGTTCATCTAGCACC 58 72012450 72015916 TAAATTGCAGCTGGTTCTG 58 NA Mus musculus 50 4930553D19Rik ENSMUSG00000021078 ENSMUST00000021482 3 1 1 67 12 72212566 72212709 CAAGAGAAGAGCTGGACAG 59 72218516 72218534 CCTTCTTTACTGGATCCCA 58 NA DesignNoJunction Mus musculus 50 Tmem14c ENSMUSG00000021361 ENSMUST00000021790 1 1 1 164 13 41113139 41113730 TATGCCAAAGCAGGTAGTG 59 41116517 41116537 CGAGTTGTAGAATCTCATCCC 59 NA Mus musculus 50 Pdlim7 ENSMUSG00000021493 ENSMUST00000109909,ENSMUST00000069929 2 2 4 272 13 55610329 55610348 GAATATTGACGGTGAGAACG 58 55608976 55609233 GAGCAACTGTTTGTCAGAG 58 NA DesignRelaxed Mus musculus 50 Hspg2 ENSMUSG00000021589 ENSMUST00000022078,ENSMUST00000109606 2 2 2 163 13 76055274 76055293 GAATTACCTTGTACATGCCC 58 76050892 76055148 AAATACTCCAGCACTCCTC 58 NA Mus musculus 50 Dydc1 ENSMUSG00000021790 ENSMUST00000022315 2 1 1 117 14 41891366 41891385 CCTAACTCAAGGTCTCACAG 59 41891465 41891914 TCTCTGTCTCATTTGCTCC 58 NA Mus musculus 50 Eaf1 ENSMUSG00000021890 ENSMUST00000022446 2 1 1 198 14 32313430 32315455 TCAAGAAGACAAGAGCTGAG 59 32315616 32315634 TTGATGTCATCCAACTGGG 59 NA Mus musculus 50 Lats2 ENSMUSG00000021959 ENSMUST00000022531 2 1 3 81 14 58313202 58313222 GTGATTCTCTTTGAGATGCTG 59 58310598 58313159 AGTTGATCACCTTCAGCTG 59 NA Mus musculus 50 Akap11 ENSMUSG00000022016 ENSMUST00000022593 3 1 1 92 14 78902806 78902824 GTAACAGCAGTAGCTGGAG 59 78902030 78902750 CATCCGATCCATCACTGTC 59 NA Mus musculus 50 Ngdn ENSMUSG00000022204 ENSMUST00000022815 2 1 1 101 14 55640955 55640973 CTGAAGGAGCAGTACTCAG 59 55641038 55641899 TTCATAGTTGACCCTGTGC 59 NA Mus musculus 50 2410187C16Rik ENSMUSG00000022359 ENSMUST00000067563,ENSMUST00000022987 2 2 2 111 15 57979938 57979956 TATCTGTTGGAGGAGTGCT 59 57982203 57984161 CATGGTAGTCCCAGATCAC 59 NA Mus musculus 50 Col2a1 ENSMUSG00000022483 ENSMUST00000088354 1 1 5 208 15 97829021 97829294 TATCAGAGATGGACCTGCA 59 97826952 97826970 TGCCTTGAAATCCTTGAGG 59 NA DesignRelaxed Mus musculus 50 Nudt16l1 ENSMUSG00000022516 ENSMUST00000115846 1 1 2 60 16 4940548 4940567 GCAGCTGTTCATCATTACTG 59 4940590 4940934 CCATTCTGAGAGTGTAGCT 58 NA DesignNoJunction Mus musculus 50 Lztr1 ENSMUSG00000022761 ENSMUST00000115681,ENSMUST00000023444 3 2 2 80 16 17525583 17525774 ACCAATTCACCAAGGTCTC 59 17525817 17525836 CCAAGGAGTCTATGATGTCC 59 NA Mus musculus 50 Zfp148 ENSMUSG00000022811 ENSMUST00000089677,ENSMUST00000089675 2 2 2 155 16 33496484 33496502 CAAGTAACAACAGCAGGGA 59 33496618 33497388 CATGATTGCTCTTAATCTCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ece2 ENSMUSG00000022842 ENSMUST00000051465,ENSMUST00000079600,ENSMUST00000003898 1 3 4 80 16 20642560 20642579 TGATATGATTGGTTTCCCTG 57 20642621 20643435 TCTTCAGAGACTTCATACCC 58 NA Mus musculus 50 Ndufa5 ENSMUSG00000023089 ENSMUST00000023851 3 1 1 118 6 24468824 24469210 GGAAGAGGTGATTCTTCAGG 59 24468725 24468743 ATATTGGCCACTTCCACTG 59 NA DesignNoJunction Mus musculus 50 Acy1 ENSMUSG00000023262 ENSMUST00000024031 3 1 1 94 9 106338541 106339034 TCTTCAAGGAACATTGGCA 59 106338465 106338483 GACACTCTTCATGTCCTGG 59 NA Mus musculus 50 1110021J02Rik ENSMUSG00000024018 ENSMUST00000114648 1 1 2 113 17 29841405 29842225 TCCAAGTATGAGAAAGAGCT 58 29841311 29841329 TCACATAGTCCAGTAAGCA 57 NA Mus musculus 50 Cyp1b1 ENSMUSG00000024087 ENSMUST00000024894 2 1 1 90 17 80112664 80112683 TATTACGGACATCTTCGGAG 58 80110006 80112611 CTGAACATCCGGGTATCTG 59 NA Mus musculus 50 Sos1 ENSMUSG00000024241 ENSMUST00000068714 1 1 1 80 17 80833485 80834247 AACGAAGACTAAGTGAGTCTG 59 80833425 80833443 CGTTCATCTTCTTGATGGC 58 NA Mus musculus 50 Slc25a46 ENSMUSG00000024259 ENSMUST00000097640,ENSMUST00000060396 2 2 2 81 18 31743418 31754245 ATCGAAACAGTACAGAGTGAG 59 31743357 31743376 CTATCACTCGTCCAATTCCT 58 NA Mus musculus 50 Fads3 ENSMUSG00000024664 ENSMUST00000025566 3 1 1 109 19 10128826 10129100 AGTCATCTGTGGAGTATGG 58 10129613 10129631 TTCAAAGTTCACCAAGGTG 58 NA Mus musculus 50 2410127L17Rik ENSMUSG00000024726 ENSMUST00000025632 3 1 1 80 19 18752305 18752323 CAGGAAATACTGCTGACCA 59 18752366 18753605 CTTTCCATTGGCATCTTCTC 58 NA Nonspecific Mus musculus 50 Slit1 ENSMUSG00000025020 ENSMUST00000025993 3 1 1 85 19 41708802 41709098 GTCCACACTAAACCTCCTG 59 41708735 41708753 CAATCTTCCTCTTCCGGAG 59 NA Mus musculus 50 Fundc1 ENSMUSG00000025040 ENSMUST00000026016 3 1 1 67 X 17135837 17135855 GAAGCGAGCAAATAAAGCA 59 17135119 17135807 GCTTGATAAAGTCTGTTGCT 58 NA DesignNoJunction Mus musculus 50 Lrrc45 ENSMUSG00000025145 ENSMUST00000026139 3 1 1 85 11 120576279 120576467 CATCTGGATCTAAAGGGCA 58 120576513 120576534 CTCTGAATAGACTTGTTCTGTC 58 NA Mus musculus 50 Lztfl1 ENSMUSG00000025245 ENSMUST00000098258,ENSMUST00000026274 3 2 2 82 9 123617079 123617097 ATGCTCTGGATGAGAAGTC 58 123611408 123617034 CTTTAGCAAATCCTGTTGGT 58 NA Nonspecific Mus musculus 50 Apex2 ENSMUSG00000025269 ENSMUST00000112725,ENSMUST00000112727,ENSMUST00000112720,ENSMUST00000112721,ENSMUST00000026303,ENSMUST00000112719 1 6 6 124 X 147019838 147019856 ATCAATGTGTACTGCCCTC 59 147019066 147019750 ATTATCACGTGACTGCCAG 59 NA Mus musculus 50 Gli1 ENSMUSG00000025407 ENSMUST00000026474,ENSMUST00000105252 2 2 2 80 10 126775526 126775544 TAGCTATAGTGAGCCATGC 58 126775208 126775482 AGACCAGAAAGTCCTTCTG 58 NA Mus musculus 50 Higd2a ENSMUSG00000025868 ENSMUST00000026986 1 1 1 83 13 54691738 54691756 AAGTTTATTCGCAAGACCC 58 54692107 54692125 GTAAAGGCCATAGGTGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930418G15Rik ENSMUSG00000025916 ENSMUST00000027049 2 1 1 80 1 9990211 9993327 ATAGACTCGATTGATGACCT 57 9990150 9990168 AGTGACTTGACTAATGCGA 58 NA Mus musculus 50 Ormdl1 ENSMUSG00000026097 ENSMUST00000027266 2 1 1 101 1 53362403 53362422 ACAGTTTACATCTTCTCGGA 58 53365705 53365724 TTTAGGATGAAGTGAGTCGG 59 NA DesignNoJunction Mus musculus 50 4921511C04Rik ENSMUSG00000026115 ENSMUST00000027289 3 1 1 92 1 37214271 37214289 GAACAGGCCATCAAATCCT 59 37221391 37222506 CTTGATTGCATCCAACTTCTC 59 NA DesignRelaxed Mus musculus 50 Pnkd ENSMUSG00000026179 ENSMUST00000113805 2 1 4 240 1 74331594 74331612 CAAACTACAATTCCCGACG 58 74332519 74332538 GAATGTATTCTAGCTCAGGG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Il8rb ENSMUSG00000026180 ENSMUST00000027372 2 1 1 72 1 74206414 74206432 ACAGGAACATAGCATAGCA 58 74206661 74206679 GACTTGCTGGATTACATGC 58 NA DesignNoJunction, InUTR Mus musculus 50 Xrcc5 ENSMUSG00000026187 ENSMUST00000027379 1 1 1 84 1 72385596 72385614 CGTCCGATATGCTTATGAC 57 72385662 72386571 AACTAAACACTCATAGGCG 57 NA Mus musculus 50 Pecr ENSMUSG00000026189 ENSMUST00000027381,ENSMUST00000097698 3 2 2 94 1 72316911 72316931 AGAGAAGGTGTTTACAACCTC 59 72314078 72316855 GAGTAAATGGTCCCAGGAG 59 NA Mus musculus 50 Bard1 ENSMUSG00000026196 ENSMUST00000027393 2 1 1 88 1 71134822 71136059 GCACATCTTCTGTAGTGGT 59 71134752 71134771 TCTTGAGGTCTAGGATCCAG 59 NA Mus musculus 50 Ptprn ENSMUSG00000026204 ENSMUST00000027404 3 1 1 80 1 75244462 75244483 GTGAAGGAGATTGATATTGCTG 59 75244187 75244421 AAACTGGTCCTTAGAACGG 59 NA Mus musculus 50 Rab17 ENSMUSG00000026304 ENSMUST00000027529 3 1 1 88 1 92857746 92857764 AGAAGTACCAAAGCGTCTG 59 92856693 92857694 GTGAAAGGAATCCTTCCGA 59 NA Mus musculus 50 Actr3 ENSMUSG00000026341 ENSMUST00000027579 2 1 1 135 1 127294109 127299977 ATCCAGAGTTTGCTAATCCAG 59 127293775 127293793 CTGAACATGGTTGAACCAC 58 NA Mus musculus 50 Nme7 ENSMUSG00000026575 ENSMUST00000027862,ENSMUST00000086028 3 2 2 81 1 166270961 166273353 CTCTGACAAGGAAAGAAGC 58 166275350 166275370 GTGATAAACTGGATCAGTTCG 58 NA Mus musculus 50 Rgs5 ENSMUSG00000026678 ENSMUST00000027997 2 1 1 116 1 171607024 171607044 CATTCCATACAATGAGAAGCC 59 171612938 171620556 GCAAATCCATAGCTGTTCTG 59 NA Mus musculus 50 Vim ENSMUSG00000026728 ENSMUST00000028062 2 1 1 84 2 13501164 13501653 TAAAGGCACTAACGAGTCC 59 13501701 13501719 AGTGTCCTGGTAGTTAGCA 59 NA Mus musculus 50 Grin1 ENSMUSG00000026959 ENSMUST00000114312,ENSMUST00000114307,ENSMUST00000114318,ENSMUST00000114314,ENSMUST00000114317,ENSMUST00000114310,ENSMUST00000028335,ENSMUST00000114308 3 8 8 81 2 25159300 25159318 TGACAGGAAGATCATCTGG 58 25154047 25159258 TGTCACTATCTTTAGTCTGGTG 59 NA Mus musculus 50 Depdc7 ENSMUSG00000027173 ENSMUST00000028595 3 1 1 89 2 104563524 104563542 AACAGGGAGGAGTTTAGAC 58 104563310 104563471 CCGATTGTCACTTTCTTCC 58 NA Mus musculus 50 Smox ENSMUSG00000027333 ENSMUST00000110189,ENSMUST00000110186,ENSMUST00000028806,ENSMUST00000110184,ENSMUST00000110183,ENSMUST00000110179,ENSMUST00000110188,ENSMUST00000110181,ENSMUST00000110180 2 9 10 109 2 131342085 131342103 TTTACTCCAAGAATGGCGT 59 131342175 131345845 GGTCATGTTATAGACCTCGT 58 NA Mus musculus 50 Smox ENSMUSG00000027333 ENSMUST00000110182 1 1 10 129 2 131342165 131350482 GATTTATACAACGAGCCCA 57 131350575 131350593 CTCGGTACATCTCGATGAG 59 NA DesignRelaxed Mus musculus 50 U46068 ENSMUSG00000027485 ENSMUST00000081816,ENSMUST00000028987 3 2 2 82 2 154041043 154041062 TGCTCAACTTCAATAACGTC 58 154041994 154042921 CTTCAGGACTTCAGGATCG 59 NA Mus musculus 50 BC006779 ENSMUSG00000027580 ENSMUST00000108831,ENSMUST00000029102,ENSMUST00000087446,ENSMUST00000094203 3 4 4 135 2 180972160 180972178 CACCACTGCTCATCTATGG 59 180971223 180972063 ATATAGATGTCTGCAGCACTG 59 NA Mus musculus 50 Actl6a ENSMUSG00000027671 ENSMUST00000029214 2 1 1 80 3 32624185 32624203 TGATTGCAAACAACACGAC 59 32624246 32625453 GAAAGGTACCCAAAGATGCT 59 NA Mus musculus 50 D3Ertd300e ENSMUSG00000027751 ENSMUST00000029315 3 1 1 80 3 54510832 54510852 GCAGTCCAGTAATATGAAGTC 58 54510894 54511023 TCACAGACTAAAGTCTGCA 58 NA Mus musculus 50 Tlr2 ENSMUSG00000027995 ENSMUST00000029623 2 1 1 112 3 83642702 83644819 AGACAAAGCGTCAAATCTC 58 83642608 83642626 CATGACAGAGACTCCTGAG 58 NA InUTR Mus musculus 50 2310007A19Rik ENSMUSG00000028139 ENSMUST00000029785 2 1 1 96 3 94276102 94276120 CAAAGAGGTGTCTCTGCTC 59 94269792 94270811 ATCCGTGAAATAGTGTGCA 59 NA Mus musculus 50 Hmgcl ENSMUSG00000028672 ENSMUST00000030432 3 1 1 83 4 135511576 135511597 CTCTATAGAGGAGAGTTTCCAG 58 135511641 135514646 GAGACATACCCTCTCACAG 58 NA Mus musculus 50 Ipp ENSMUSG00000028696 ENSMUST00000106479,ENSMUST00000030461 1 2 2 80 4 116202399 116203021 CAATCTATGCTTTGGGTGG 58 116203064 116203083 CCCACTTATTCTCATCAGGA 58 NA Mus musculus 50 Ccdc28b ENSMUSG00000028795 ENSMUST00000030586,ENSMUST00000106035 3 2 2 82 4 129298278 129298297 GTTTATGAGATGGAGGGAGG 59 129298108 129298233 GAACATTCCTTCCCAAAGG 58 NA Mus musculus 50 Sfrs4 ENSMUSG00000028911 ENSMUST00000053819,ENSMUST00000030743 1 2 2 80 4 131448040 131448059 CCTACTCGCACAGAATACAG 59 131448101 131453583 ACGCATGTAATCCTTTAGGT 59 NA Mus musculus 50 Hes2 ENSMUSG00000028940 ENSMUST00000030782 2 1 1 83 4 151534270 151534288 CATCCTGGAAATGACTGTG 58 151534335 151534441 TAGCTATTCAAAGGCCCAG 59 NA Mus musculus 50 Srd5a3 ENSMUSG00000029233 ENSMUST00000113508 1 1 2 95 5 76578872 76578890 CTCTAATGCAGCCATTCAC 58 76578950 76578969 TATCATCCATGGGACTTGG 58 NA Mus musculus 50 G3bp2 ENSMUSG00000029405 ENSMUST00000031352,ENSMUST00000113127 2 2 2 84 5 92495598 92497358 CTCCAGAAGGATCTGTTCC 59 92495532 92495551 GGTTCAGAATCACCAAACAC 59 NA Mus musculus 50 D5Ertd585e ENSMUSG00000029501 ENSMUST00000031474,ENSMUST00000086674 1 2 2 80 5 110667085 110667103 CAACATGGACATGCTACAG 58 110667146 110670958 GTATCAAAGCCCACTTTGTC 59 NA Mus musculus 50 Prkab1 ENSMUSG00000029513 ENSMUST00000031486,ENSMUST00000111999 1 2 2 86 5 116464727 116464932 CTCCATCAAGGATGGAGTG 59 116464659 116464678 CATATCGGCTTGTAGAGGAG 59 NA Mus musculus 50 Bcl7b ENSMUSG00000029681 ENSMUST00000031692 2 1 2 60 5 135653082 135655824 CCTTGAATTCCAGGATGAG 57 135655846 135655866 CTTGAGTTGATAGACATCCGA 59 NA DesignRelaxed Mus musculus 50 Svopl ENSMUSG00000029830 ENSMUST00000096040,ENSMUST00000040486 3 2 2 85 6 37991153 37991542 AGCAGAAAGAGACCAAGAC 59 37991086 37991106 GATTAGGAAGAGTGCAATGTG 59 NA Mus musculus 50 Kel ENSMUSG00000029866 ENSMUST00000031899 2 1 1 80 6 41647465 41648306 AATCACAGGGAGAGTATACAG 58 41647405 41647424 CTGGAATTTAGTGTCCAGTG 58 NA Mus musculus 50 Anxa4 ENSMUSG00000029994 ENSMUST00000113675,ENSMUST00000001187,ENSMUST00000089525 3 3 3 82 6 86703848 86703867 CTGTCTGATTGAGATCCTGG 59 86702215 86703803 TCCTTCCATATTGCTGCTG 59 NA Mus musculus 50 Klrd1 ENSMUSG00000030165 ENSMUST00000112063 1 1 1 108 6 129543566 129543585 CTTGATGGTTACTTTGGGAG 58 129543801 129545438 GCATTCAGAAACTTCCTGG 58 NA Nonspecific Mus musculus 50 Arhgdib ENSMUSG00000030220 ENSMUST00000111892,ENSMUST00000032344,ENSMUST00000111891 3 3 3 86 6 136872838 136875201 GCATGAGAGTGGATAAAGC 58 136872770 136872788 CTTCCTCTACTGGAGTGAG 58 NA Mus musculus 50 Med21 ENSMUSG00000030291 ENSMUST00000032429 1 1 1 169 6 146596793 146597683 CTACAGAAGAGTATGCTCAGC 59 146598674 146598692 ATCCTCCAGACATGTAGCA 59 NA Mus musculus 50 Slc6a1 ENSMUSG00000030310 ENSMUST00000032454 3 1 2 80 6 114258110 114258557 ACAATGTGTACAGGGACTC 58 114258601 114258619 TGGAGAAGATGACGAATCC 58 NA Mus musculus 50 Tspan11 ENSMUSG00000030351 ENSMUST00000032501 2 1 1 80 6 127873691 127873709 GTCTTGTCATGACAACTGG 58 127873753 127888228 GGCAGAAATATGTGGAGAG 57 NA Mus musculus 50 Clec2i ENSMUSG00000030365 ENSMUST00000032519 3 1 1 113 6 128845444 128846441 AACAACATGAATCCCATCCT 59 128846517 128846535 GTTGTTGAGCTTGCTACAG 59 NA Mus musculus 50 Xylt1 ENSMUSG00000030657 ENSMUST00000032892 1 1 1 80 7 124737185 124737206 TCTACTAGAGATGACTGACTGG 59 124737247 124765445 TGGTCATTTGTCCTGATGG 59 NA Mus musculus 50 Scnn1b ENSMUSG00000030873 ENSMUST00000033161 3 1 1 80 7 129057779 129057798 CCACTACTTATACCCACTGC 59 129057839 129058800 TTTAGATAGCAATAGGCCCAG 59 NA Mus musculus 50 Swap70 ENSMUSG00000031015 ENSMUST00000033325 2 1 1 80 7 117407556 117407574 CGTCAGACCGTATCTATGG 59 117407618 117409364 CTTCATCATGTAACCCTGC 58 NA Mus musculus 50 Kir3dl1 ENSMUSG00000031424 ENSMUST00000033799 1 1 2 81 X 133068495 133068517 AGAAGGACAGGTTACATACAC 59 133068559 133068578 CTCAGAAATTCGGGAAATGG 58 NA Mus musculus 50 Cdh16 ENSMUSG00000031881 ENSMUST00000034352 3 1 1 80 8 107141891 107141909 CCAGAAGGGATCTTTGACC 59 107141752 107141848 CTCATAGCTGAGGTTCTTCC 59 NA Mus musculus 50 Panx1 ENSMUSG00000031934 ENSMUST00000056755 2 1 1 90 9 14810651 14811814 GAGTTCAAAGATTTGGACCTG 59 14810581 14810599 ATTAGCAGGACGGATTCAG 59 NA Mus musculus 50 Stt3a ENSMUSG00000032116 ENSMUST00000086102 1 1 1 80 9 36566835 36566853 ATAACTGGTTTGATGACCG 57 36566438 36566792 AAGTGATCATTAAACCTGGG 57 NA Mus musculus 50 BC003885 ENSMUSG00000032215 ENSMUST00000113505 2 1 2 62 9 72969014 72969033 AGAAGAACAAGAGCTCCAG 58 72969059 72969077 ATGAGATGGATGTTCTGCT 58 NA DesignRelaxed Mus musculus 50 Snx1 ENSMUSG00000032382 ENSMUST00000034946 2 1 1 80 9 65936991 65937349 GTGACACGATTTGAGAAAGAG 59 65936931 65936949 CTGGGAATGTAGGAGTGTC 59 NA Mus musculus 50 Nck1 ENSMUSG00000032475 ENSMUST00000116522 3 1 3 80 9 100398383 100408860 AAGGACACCTTAGGTATTGG 58 100398322 100398341 AACAAAGCTATCATCAGCAG 58 NA Mus musculus 50 Nradd ENSMUSG00000032491 ENSMUST00000035069 3 1 1 96 9 110524755 110525599 TCTATTCAGATACAGCCCTG 58 110524678 110524696 AATAGGGAGGAGGTATTGG 57 NA Mus musculus 50 Acpp ENSMUSG00000032561 ENSMUST00000062723,ENSMUST00000112590 1 2 2 96 9 104216767 104218570 CCTTTATTCTGCGAGAGTG 57 104216689 104216710 GCAGAGATAATTCTGATAGCTC 58 NA Mus musculus 50 Gnai2 ENSMUSG00000032562 ENSMUST00000055704 3 1 1 103 9 107522512 107522763 TCAAGCAGATGAAGATCATCC 59 107522429 107522447 GATGGCCATGATAGACTGG 59 NA Mus musculus 50 Crebl2 ENSMUSG00000032652 ENSMUST00000111938,ENSMUST00000046303 2 2 2 82 6 134799246 134799264 GTACCAGTACTTGGAGGAG 58 134799310 134801107 ACTGCTTGTACATTTCCAG 57 NA Mus musculus 50 Pwp2 ENSMUSG00000032834 ENSMUST00000042556,ENSMUST00000105392 3 2 2 88 10 77636455 77636585 GAATGAAATTGAGGTAGTCAGC 59 77636388 77636408 TAGATTCTTCAAAGGAGGCAG 59 NA Mus musculus 50 Caskin1 ENSMUSG00000033597 ENSMUST00000024958,ENSMUST00000088474,ENSMUST00000115347 2 3 3 81 17 24633447 24633465 AGTAAATGTCCCATCCGAC 59 24633510 24633610 TAGCATCTCTGACACATCG 58 NA Mus musculus 50 Tmem87a ENSMUSG00000033808 ENSMUST00000090046,ENSMUST00000090042,ENSMUST00000043847,ENSMUST00000110729 3 4 4 81 2 120203718 120205334 AGAATCTGTCCAGAATGCC 59 120203655 120203673 TATGATGACCAGGGTTCGA 59 NA Mus musculus 50 Zfp551 ENSMUSG00000034071 ENSMUST00000080348 2 1 1 100 7 13007766 13007785 CTCTACAGAATCCAATGGCT 59 13004001 13007160 CTCAAAGGACACATCCAGG 59 NA Mus musculus 50 Emid1 ENSMUSG00000034164 ENSMUST00000062821,ENSMUST00000036246 3 2 2 160 11 5043883 5043901 TGACGTACAAGACAGTGAC 59 5034403 5035364 GTTGAGACAACCTGAGAGG 59 NA InUTR Mus musculus 50 Igsf9b ENSMUSG00000034275 ENSMUST00000115247,ENSMUST00000098919 1 2 3 87 9 27134530 27134548 ATACCAGTTCAGTGTCCTG 58 27134599 27136075 AACAGGGAATGCTAAAGTG 57 NA Mus musculus 50 Evpl ENSMUSG00000034282 ENSMUST00000037007 2 1 1 82 11 116095521 116095542 TGTATGAGAAGATGGTACTTCC 59 116094817 116095478 GACCAGATTCTGTTTCTGC 58 NA Mus musculus 50 Tmem127 ENSMUSG00000034850 ENSMUST00000035871 2 1 1 91 2 127081895 127082700 CATCCTCACTGTCCTACAG 58 127082755 127082773 ACTTCTTATGCTGTTGCTG 58 NA Mus musculus 50 Arhgap5 ENSMUSG00000035133 ENSMUST00000110725 1 1 2 86 12 53663407 53668009 CTAAACAGGGTTAGTCAGCA 59 53668058 53668076 AGGTCTCATCAAAGTTGGC 59 NA Mus musculus 50 2810406K13Rik ENSMUSG00000035298 ENSMUST00000037359 3 1 1 87 7 106618844 106619471 ACATTTACGTTTCTGGAGGT 59 106619521 106619539 ATTGAGGCAACCTTGATCC 59 NA Mus musculus 50 Crb2 ENSMUSG00000035403 ENSMUST00000050372 1 1 1 85 2 37650164 37650910 CAGATGTCAGAGTCTCGAC 59 37650959 37650977 ATTCAAATATGCCACTGGC 58 NA DesignNoJunction Mus musculus 50 Prdm4 ENSMUSG00000035529 ENSMUST00000037646 3 1 1 83 10 85367006 85368102 CAGATGTTGTTGGTGTCCT 59 85366941 85366959 CAATTAGAGGTCCGAAGCA 59 NA Mus musculus 50 Utp6 ENSMUSG00000035575 ENSMUST00000108241,ENSMUST00000043152 2 2 2 80 11 79762567 79764280 TTATGATGACCTTCAAGCTC 57 79762506 79762525 GACTCGATCTCTAATTCTCG 57 NA Mus musculus 50 Tmem161b ENSMUSG00000035762 ENSMUST00000057495,ENSMUST00000050885 1 2 2 82 13 84399772 84399790 TAAGCCACTAACCATTCCA 58 84399836 84411784 AATGCAGTGCTAAAGTGTC 58 NA Mus musculus 50 Slc2a6 ENSMUSG00000036067 ENSMUST00000045702 1 1 2 131 2 26878764 26879067 CTCTATGTGTCAGCATCCG 59 26878651 26878669 ATAGTTGAAGGCTGTGTCC 59 NA Mus musculus 50 Nat12 ENSMUSG00000036282 ENSMUST00000037362 1 1 1 100 14 49797762 49797780 TTGCAAGTTGGATATGCAC 58 49797844 49800392 CCAAGTTAGTACCAATGCC 58 NA Mus musculus 50 March1 ENSMUSG00000036469 ENSMUST00000110255,ENSMUST00000039540 2 2 7 88 8 68980075 68992136 GAAATCAAGCAAGGTGTGC 59 68992188 68992206 TACATGAAGACGAGACCTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Ccdc113 ENSMUSG00000036598 ENSMUST00000041569 3 1 1 83 8 98064781 98064800 TATCCAAGAAGAAAGGGAGC 59 98064846 98066531 TTATATTATCCCTGCGGCG 59 NA Mus musculus 50 Mrpl55 ENSMUSG00000036860 ENSMUST00000108786,ENSMUST00000108787,ENSMUST00000045697,ENSMUST00000108785,ENSMUST00000108784,ENSMUST00000116374 2 6 6 132 11 59018218 59018237 ACTATCCATATCCGATACCG 57 59019223 59019241 CTTCTTCCCTCTTCTGCTG 59 NA DesignNoJunction Mus musculus 50 4930549C01Rik ENSMUSG00000036921 ENSMUST00000046647 3 1 1 62 4 136166516 136166534 ATCTTGTTTGCCTTCCTCC 59 136166560 136166578 GTGTTCTTGTTTGACCAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Foxa2 ENSMUSG00000037025 ENSMUST00000047315 2 1 3 132 2 147871621 147872602 GTTAAAGTATGCTGGGAGC 58 147870505 147870523 GTGTTCATGCCATTCATCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Zfp60 ENSMUSG00000037640 ENSMUST00000042641 3 1 2 134 7 28516617 28516635 CATTATCACCGTGCTTGTC 58 28522004 28523336 AAATGTCACTGACCCACAG 59 NA InUTR Mus musculus 50 3110057O12Rik ENSMUSG00000037818 ENSMUST00000108078,ENSMUST00000076920 1 2 4 149 3 40709844 40709862 TGGTTTCAAGTGACTACCC 59 40714520 40720621 CGATAAACTGGAATCTTGCA 58 NA Mus musculus 50 Prdm1 ENSMUSG00000038151 ENSMUST00000105490,ENSMUST00000039174 2 2 2 81 10 44170036 44176440 CAGCAAAGAGGTTATTGGC 59 44169973 44169991 GTAGACTTCACCGATGAGG 59 NA Mus musculus 50 Kcna7 ENSMUSG00000038201 ENSMUST00000107774 2 1 1 103 7 52665106 52665124 GAAACACATGGTGACTGAG 58 52665191 52665209 TTAGTCCTTAACCCAGCAC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Hoxa9 ENSMUSG00000038227 ENSMUST00000114425 1 1 2 107 6 52174475 52175538 CCATCGATCCCAATAACCC 59 52174386 52174405 GAAACTCCTTCTCCAGTTCC 59 NA InUTR Mus musculus 50 Susd4 ENSMUSG00000038576 ENSMUST00000048739,ENSMUST00000085724 3 2 2 130 1 184817654 184818909 TCAAATCAGAACAAACGTGG 58 184819002 184819020 CTTGGTCTGGAACATTCTG 58 NA Mus musculus 50 Rassf7 ENSMUSG00000038618 ENSMUST00000046890 1 1 1 122 7 148402741 148402907 CAAGCTATAGGCCAGACAG 59 148402993 148403011 ATCATTGGCAAACTGTCCA 59 NA Mus musculus 50 Plcl2 ENSMUSG00000038910 ENSMUST00000043938 3 1 1 137 17 50748097 50750325 GAACATGCAGAATGCAGTG 59 50750425 50750444 CTAAGGTTCAAGACCACCAG 59 NA Mus musculus 50 Chad ENSMUSG00000039084 ENSMUST00000040418 3 1 1 84 11 94429661 94429904 TTAAACAGGTCCTGATCCA 57 94429952 94429970 GAAGGTGTGGATAATGGGA 58 NA InUTR Mus musculus 50 Azi1 ENSMUSG00000039781 ENSMUST00000106229 1 1 2 72 11 119934277 119934444 CAGGTACTACAACAGAAACG 58 119934224 119934242 TCTCTGGTCTGTCCTTAGG 59 NA DesignRelaxed Mus musculus 50 Slc26a11 ENSMUSG00000039908 ENSMUST00000050880 3 1 1 96 11 119238143 119238162 GAGATCCAGTACGGTATCCT 59 119238221 119238498 TTTGTCCTTCTGACACCTG 59 NA Mus musculus 50 9430038I01Rik ENSMUSG00000040139 ENSMUST00000068996 3 1 1 154 7 144579346 144579365 CAGAACCAGGTGGATATGAG 59 144579105 144579229 GTTCTGCAGAACCATTGAG 58 NA Mus musculus 50 Cacng5 ENSMUSG00000040373 ENSMUST00000106742,ENSMUST00000039071 1 2 2 66 11 107742913 107742932 GGCATCTTCTTTATCCTCTC 57 107739310 107739328 TGATGCTGGAGATGTACAG 58 NA DesignNoJunction Mus musculus 50 Ckm ENSMUSG00000040705 ENSMUST00000047020 1 1 1 155 7 20005788 20006508 CAGGTAGAGAATCTGAGCC 58 20005465 20005483 ATCTTCAAGAAGGCTGGTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Slc19a2 ENSMUSG00000040918 ENSMUST00000044021 3 1 1 81 1 166192879 166193526 GTATCACCACTCAGTTCCTG 59 166193569 166193588 ATACTGACTATGCCATTCGC 59 NA Mus musculus 50 Cables1 ENSMUSG00000040957 ENSMUST00000046948 3 1 1 85 18 12084862 12098234 CCTTCATACATGACCACAG 57 12098283 12098301 GGAAACTTCTCCTTGAAGG 57 NA Mus musculus 50 Kctd12b ENSMUSG00000041633 ENSMUST00000039424 3 1 2 119 X 150124230 150130174 CATACAAGGTCAACATGGC 58 150124129 150124147 AGCGAGTTATGTACACCTG 59 NA InUTR Mus musculus 50 Gpr45 ENSMUSG00000041907 ENSMUST00000039328,ENSMUST00000114761 3 2 2 60 1 43090024 43090042 GAGGATCAAGAAATTCCGC 58 43090066 43090084 GAGGATTTGGAAAGTGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Flg ENSMUSG00000041991 ENSMUST00000090856,ENSMUST00000093774 3 2 7 93 3 93124557 93124576 CTGAATATGGGAACTGTGAC 57 93124631 93126530 GGATCATCTGGATTCTTCAG 57 NA Mus musculus 50 Sgsm3 ENSMUSG00000042303 ENSMUST00000100407 2 1 2 80 15 80833868 80834245 ACTCACAGAAAGAAGAATCC 57 80834288 80834498 GAAAGTCTTCCTTGTCCAC 57 NA Mus musculus 50 1810007P19Rik ENSMUSG00000042616 ENSMUST00000035497,ENSMUST00000106156 1 2 2 80 4 125760158 125760176 CTCTAATGGTCGCTTTGTG 58 125760218 125760848 CTGAACACTCTAATGACTCCA 59 NA Mus musculus 50 Rasef ENSMUSG00000043003 ENSMUST00000102837,ENSMUST00000058292 2 2 2 80 4 73381668 73381687 AAACTCTGATTGTGGATGGT 59 73380441 73381626 TGGCGATACTCCTAAATCTC 58 NA Mus musculus 50 Olfr131 ENSMUSG00000043312 ENSMUST00000059560 2 1 1 60 17 38219073 38219091 TTTGGCACTGTTCTATGGA 58 38219031 38219052 CCTCAAGGTATAGATAAGAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cep164 ENSMUSG00000043987 ENSMUST00000114625 2 1 4 139 9 45626162 45631737 GTGAGCAAGAAATCCTTGAC 59 45617973 45617991 ATCACCTGTGATGTTCTGG 59 NA Mus musculus 50 Apol7c ENSMUSG00000044309 ENSMUST00000062562 1 1 1 162 15 77359331 77360431 GATTTGTCCAGGGAAGAGG 59 77356883 77356901 CAGCTATGGTCTCAGTCAG 59 NA Mus musculus 50 Olfr649 ENSMUSG00000044899 ENSMUST00000106859,ENSMUST00000060440 2 2 2 60 7 111338300 111338319 ATACCACTATTCTCACACCC 58 111338259 111338277 CTTCGGAAAGAGATTCCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pcdhb4 ENSMUSG00000045689 ENSMUST00000056712 3 1 1 60 18 37468019 37468038 GTACAATCGCTCTATGAGGT 58 37468060 37468079 TGACAAGTAAGGCATCAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 B430212C06Rik ENSMUSG00000046415 ENSMUST00000054227 2 1 1 60 18 67487776 67487796 GCTAGTTGATAACTTCTGTGG 58 67487736 67487755 CTCAAGACAGGAAACTTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC025546 ENSMUSG00000046441 ENSMUST00000056972 1 1 1 60 8 112746349 112746367 TTCAATAGTTGGGCAGAGG 59 112746391 112746409 CTTCAAGGAGGGAATTCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr71 ENSMUSG00000046450 ENSMUST00000107862,ENSMUST00000055401 1 2 2 60 4 43718648 43718667 ATGTACATGAAACCCAAGAG 57 43718607 43718625 AGAGGACTGTAAAGACCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1341 ENSMUSG00000046790 ENSMUST00000061215 1 1 1 72 4 118382025 118382044 CAATCAGACCTTTGTGACAG 58 118382079 118382097 GAAGAGAAGAGGTGTGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Krt1 ENSMUSG00000046834 ENSMUST00000023790 2 1 1 80 15 101677983 101678001 AGATTTCTGAGCTGAATCG 57 101677460 101677939 GCTGTATTTGGGAGATCTG 57 NA Mus musculus 50 Dusp28 ENSMUSG00000047067 ENSMUST00000060913 3 1 1 269 1 94803742 94803760 CACTTTGTGCGTCAATGTC 59 94803993 94804152 CTCTTCACCATCTGGAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Klhl11 ENSMUSG00000048732 ENSMUST00000056665 1 1 1 81 11 100333550 100333568 ATCGAGTACATGTACACCG 58 100325752 100333505 ATAAGAATCTGTCGGCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr202 ENSMUSG00000048810 ENSMUST00000049859 1 1 1 60 16 59284173 59284191 GACTGATTGCTCTCATCTG 57 59284131 59284149 CTGAGGAAGACGTACATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Prmt6 ENSMUSG00000049300 ENSMUST00000061464,ENSMUST00000106567 1 2 2 92 3 110053725 110053743 GTACTACGAGTGCTACTCC 58 110053651 110053669 TTCTTCAGGATGCCTAAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Clip1 ENSMUSG00000049550 ENSMUST00000111566,ENSMUST00000111564,ENSMUST00000111552,ENSMUST00000111561,ENSMUST00000031382 3 5 5 90 5 124077307 124077326 TTGGAGAAAGAACTTCAGAC 57 124072840 124073231 TTACGGTATCTTGCATCCT 58 NA Mus musculus 50 Nkx3-2 ENSMUSG00000049691 ENSMUST00000060820 3 1 1 90 5 42152999 42153017 ACCAAAGACAGTATTTGCC 57 42152927 42152945 GGGAGACAGTAGTAAGGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trex1 ENSMUSG00000049734 ENSMUST00000112054 3 1 3 123 9 108961750 108961768 TTTACTTCCTCAGCCACAC 59 108961385 108961403 TAAGAAGATGAGGGTCTGC 58 NA DesignNoJunction, InUTR Mus musculus 50 NR_003640.1 ENSMUSG00000051139 ENSMUST00000059320 1 1 1 60 X 160198720 160198740 GTGGAAATGTGACTAGAAGAG 58 160198680 160198698 ATGGTTTCGAGGTCTACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1325 ENSMUSG00000051706 ENSMUST00000054541 2 1 1 60 X 71840288 71840306 GCTGTCATTTCAATGCCAG 59 71840329 71840348 TGAGGATGCAAAGGTAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lax1 ENSMUSG00000051998 ENSMUST00000063620 1 1 1 100 1 135579613 135580115 GGGAGACATCAGTTGAGTG 59 135577184 135577202 ATCTGAAGGGAACCATTGG 59 NA DesignNoJunction Mus musculus 50 MGI:96020 ENSMUSG00000052305 ENSMUST00000023934 2 1 1 182 7 110975307 110975979 GATCCTGAGAACTTCAGGC 59 110975143 110975161 TAACCATTGTTCACAGGCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Olfr352 ENSMUSG00000053146 ENSMUST00000065416 1 1 1 60 2 36725665 36725683 CAGACACCACCATTAACGA 59 36725707 36725725 GGCACAGTTATGATCACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000054032 ENSMUSG00000054032 ENSMUST00000066813 3 1 1 86 5 100628879 100628898 AACTCACTTTGTAGACCAGG 59 100628947 100628965 CGCTTACGAGCTATTTCAC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Adm2 ENSMUSG00000054136 ENSMUST00000066991 3 1 1 196 15 89153519 89153537 TGTCTCCAGATCCTGAGAC 59 89154410 89154429 CTGGAAGGAATCTTAGCTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 4930403C10Rik ENSMUSG00000054161 ENSMUST00000067022 1 1 1 90 7 52978898 52978916 TACTTACTGCTTGACCACC 58 52978970 52979233 TATCCAGGTTCTCAGTGGT 59 NA Mus musculus 50 EG328231 ENSMUSG00000054258 ENSMUST00000067176 2 1 1 109 13 41745400 41745419 GCATGTTCTTCATGTGATCC 59 41745489 41749026 TCTTAACAGCTCTATGAGAGG 58 NA InUTR Mus musculus 50 Whsc1l1 ENSMUSG00000054823 ENSMUST00000033974,ENSMUST00000084026 2 2 2 81 8 26773719 26776510 TTCAACGAAGGGTATTGGT 58 26776555 26776573 TCTCTGACTTGGTGAAGAG 58 NA Mus musculus 50 5330416C01Rik ENSMUSG00000054944 ENSMUST00000068247 2 1 1 60 13 98514822 98514842 TCCCATTAAGAGGACAATCTG 59 98514782 98514801 CAGGTGGAGAATATGAATCG 57 NA DesignNoJunctionSingleExon Mus musculus 50 5430433E21Rik ENSMUSG00000054978 ENSMUST00000068307 3 1 1 63 9 65238288 65238306 AATTTGTCAACAGCAAGGG 58 65238243 65238261 ACAGTATAAACGGTGTCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 3300001A09Rik ENSMUSG00000055125 ENSMUST00000068526 3 1 1 103 9 67607430 67607448 CAAAGAAGGGATCCACTGG 59 67607514 67607533 CATCCTTCTAGCTTATGCCC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Tead1 ENSMUSG00000055320 ENSMUST00000084705,ENSMUST00000059768,ENSMUST00000106638 2 3 3 93 7 120005063 120019600 CAGACTCGTACAACAAACAC 59 120019656 120019674 ATCTGACGAATGTCCACAG 59 NA Mus musculus 50 Fut9 ENSMUSG00000055373 ENSMUST00000084770 2 1 2 114 4 25547967 25636194 CATGCTATGTTCTCTACACTG 58 25547873 25547891 ATAAATGAGCAGACATGCC 57 NA DesignNoJunction, InUTR Mus musculus 50 Prss34 ENSMUSG00000056399 ENSMUST00000037453 1 1 1 90 17 25436309 25436419 ATCGAGAACTACATGCCAC 59 25436473 25436491 GGTACTTCTGCTCACAGTC 59 NA Mus musculus 50 A730036I17Rik ENSMUSG00000056738 ENSMUST00000071053 2 1 1 99 2 129051257 129051275 ACAAAGAGGCATTCAACTG 58 129051462 129051480 TCTGTGATGTGATGGACAC 59 NA DesignNoJunction Mus musculus 50 Tas2r123 ENSMUSG00000057381 ENSMUST00000071696 2 1 1 60 6 132797869 132797888 CCAAACAACCTAGAGATGTC 57 132797911 132797929 GAGAACACAGTTTGCAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ankrd29 ENSMUSG00000057766 ENSMUST00000080906 1 1 1 95 18 12413202 12419452 GAGAAACAAGGCCAATGAG 58 12413125 12413143 AGTTCATTCTTCCCAGGTC 58 NA Mus musculus 50 Camk2b ENSMUSG00000057897 ENSMUST00000109815,ENSMUST00000019133,ENSMUST00000093355,ENSMUST00000090443,ENSMUST00000109813,ENSMUST00000109812,ENSMUST00000101585,ENSMUST00000066431,ENSMUST00000002817,ENSMUST00000101586 1 10 10 87 11 5928922 5928940 CTGTGTCAAGCTCTGTACC 59 5915496 5928872 CTCCAGTTTCTGGTGATCTC 59 NA Mus musculus 50 Mcm9 ENSMUSG00000058298 ENSMUST00000075540 2 1 1 80 10 53260795 53260813 AGTGTGAACTCATTCTGGA 58 53258563 53260753 CATTCTGTAACCTTTCCAGTC 58 NA Mus musculus 50 Olfr1130 ENSMUSG00000059205 ENSMUST00000079711 3 1 1 66 2 87448105 87448123 ATACCACCCATTCTCAAGC 59 87448150 87448171 CCACTAAATAGACAGATAGCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc28a ENSMUSG00000059554 ENSMUST00000080860 2 1 2 172 10 17939435 17944708 CGTTTGGAAATGAATGTTCC 57 17936077 17939302 CAATTCTTCTAAGTCCGACAG 58 NA Mus musculus 50 Sfrs17b ENSMUSG00000059708 ENSMUST00000051906,ENSMUST00000101641 2 2 2 135 X 34152654 34154262 CTTGAACTGTCTGGGATCC 59 34152537 34152555 CCAATCTAGAAGATGCCGA 58 NA Mus musculus 50 Sntb1 ENSMUSG00000060429 ENSMUST00000039769 2 1 2 113 15 55474291 55474310 CCAAGACAATCATACAGTCC 57 55470970 55474215 GAAGGTCCAGTTGAATCTC 57 NA Mus musculus 50 Olfr726 ENSMUSG00000060523 ENSMUST00000072370 3 1 1 61 14 50704024 50704042 CATCAATTTGCTGGTGGTG 59 50703981 50703999 GCAACATAGCGATCATAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ifitm2 ENSMUSG00000060591 ENSMUST00000081649 2 1 1 151 7 148141062 148141576 CTGTGAAGTCTAGGGACAG 58 148140929 148140947 TACCACAGAGGTGGTAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 5730427N09Rik ENSMUSG00000060739 ENSMUST00000073456 3 1 2 106 13 97903568 97903586 AAGGCATGGAAGAGAATGG 59 97901977 97903498 TTGAAACGTAGACCCATGG 59 NA Nonspecific Mus musculus 50 Gmfg ENSMUSG00000060791 ENSMUST00000108292,ENSMUST00000078845 1 2 2 162 7 29226502 29226521 TGAGGAAATTTCGTTTCCGA 59 29228285 29229886 CTGTAGACCACAAACCTGG 59 NA Mus musculus 50 Arl1 ENSMUSG00000060904 ENSMUST00000080379,ENSMUST00000116234,ENSMUST00000095348 1 3 3 170 10 88198682 88198701 TCAAATTCCAAGTTTGGGAC 58 88199945 88204667 TTCTCAGCTCTTCTTCCTC 58 NA Mus musculus 50 1700029P11Rik ENSMUSG00000061633 ENSMUST00000074608 2 1 1 111 15 81811192 81811210 CACACTTCCATGGTTACGA 59 81811285 81811303 TAAGCCACAAAGGTAGTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 NM_146497.1 ENSMUSG00000061975 ENSMUST00000079865 2 1 1 61 7 115466790 115466809 TAGCAATCTGTAACCCACTG 59 115466748 115466767 CAACTGGATACAGGTTTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp13 ENSMUSG00000062012 ENSMUST00000057029 1 1 2 195 17 23718211 23718229 TAATGTGCAACACTGTGGA 59 23717819 23718053 AGAAGGAACAACTTTGTCCT 59 NA Mus musculus 50 Prl3d3 ENSMUSG00000062201 ENSMUST00000073601 2 1 1 62 13 27252942 27252963 GGCAGAAACCTTATAATTCTGG 59 27252986 27254142 AATGTTAGCCTGAGTCCTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Rapgef2 ENSMUSG00000062232 ENSMUST00000037943 3 1 2 80 3 78873367 78873926 TCAATACAGCTTAGGGTCG 58 78873305 78873323 CTAGGAGAAGAGATGACCG 58 NA Mus musculus 50 Olfr410 ENSMUSG00000063116 ENSMUST00000080365 2 1 1 60 11 74148484 74148503 ATCAGTGTCACTATTCCCTC 58 74148443 74148462 ATGGAATTGTACGCTTATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG625540 ENSMUSG00000063155 ENSMUST00000078925 1 1 1 69 5 130698088 130698106 TAGGAGGAGAAGCAGACTG 59 130698037 130698056 GATAAATTTCAGGCAGCTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-let-7g ENSMUSG00000065440 ENSMUST00000083506 3 1 1 60 9 106081185 106081204 TAGTTTGTACAGTTTGAGGG 57 106081227 106081245 TGGCCTGTACAGTTATCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Phactr4 ENSMUSG00000066043 ENSMUST00000102568,ENSMUST00000084170,ENSMUST00000084249 1 3 3 80 4 131917626 131919659 GCCTCACTAGAAAGCTCAG 59 131917564 131917583 CCACATACTCATTAAACCGC 58 NA Mus musculus 50 Trim12 ENSMUSG00000066258 ENSMUST00000106839,ENSMUST00000070943 3 2 3 60 7 111454513 111454533 AAGGATAGAACTTACTGGGAG 58 111452861 111452879 ACTCTGACCGAACATTCTG 59 NA DesignNoJunction Mus musculus 50 Olfr559 ENSMUSG00000066272 ENSMUST00000084816 2 1 1 88 7 109872133 109872151 GTATGTGTACCTTGTGGTG 57 109872063 109872081 GAACTTTGAACATGGCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 NM_001111282.1 ENSMUSG00000066530 ENSMUST00000085496 2 1 1 145 19 29235507 29235525 TAAAGCAGGTACTTGTTGG 57 29235633 29235652 GTATAAGCTGCATCAGAGAC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zbtb6 ENSMUSG00000066798 ENSMUST00000112932,ENSMUST00000053098 1 2 2 60 2 37285205 37285226 TCAGAATCACCATTCTACAGAG 59 37285166 37285184 GTATAGCAGGACAACAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Vmn2r37 ENSMUSG00000066828 ENSMUST00000072787 2 1 1 60 7 8962045 8967825 GAAGAAAGATGCCATCCTC 57 8967846 8967867 CATAATCTTCTGAATCCAGGAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 NP_001098541.1 ENSMUSG00000066836 ENSMUST00000074943 1 1 1 80 7 9152702 9152720 AGATGAATTTGCAGCAGGT 59 9152763 9154152 AGGAGTTTACCTTCAAGCAG 59 NA Nonspecific Mus musculus 50 4921513D11Rik ENSMUSG00000066944 ENSMUST00000086570 2 1 1 68 17 80026132 80026809 AAATGCTTAAGCTGCTGGA 59 80026841 80026859 TTGTGGAGTAACTGGATCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rpo1-1 ENSMUSG00000067148 ENSMUST00000087026 2 1 1 115 17 46383154 46384686 TTCGAGAAGAATTTCCGTG 57 46383057 46383075 TCAGCTAACAGGATTCTCC 58 NA Mus musculus 50 Olfr1453 ENSMUSG00000067484 ENSMUST00000087773 3 1 1 60 19 13102617 13102637 CTAGGTAACCTGTCTTTAGTG 57 13102577 13102597 CTATGACCTTTGGAGTTACTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rpl35a ENSMUSG00000067575 ENSMUST00000087940 1 1 1 60 17 29274145 29274163 AATTGAAGGCGTTTATGCC 59 29274103 29274121 ATAAGCACATCTCTTGCCT 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A430093F15Rik ENSMUSG00000067577 ENSMUST00000087947 2 1 1 110 19 10857564 10859733 ATGCTGAGGGAAATATGGC 59 10859806 10859825 AACTGAGCTTTGAGAGTCTG 59 NA Mus musculus 50 Cyp2d9 ENSMUSG00000068086 ENSMUST00000089129 3 1 1 105 15 82284864 82285515 TTCCTGAGGTTCTTAATGCA 58 82285582 82285601 AACAGGTTATCCAGTATGGC 59 NA Mus musculus 50 OTTMUSG00000015730 ENSMUSG00000068130 ENSMUST00000109916 1 1 1 83 2 150237002 150237021 CTTTGCTGGATTCTTCTCAG 58 150236729 150236956 AACTGTAGCCTATAGCAGC 58 NA Nonspecific Mus musculus 50 Lyz ENSMUSG00000069515 ENSMUST00000092162 1 1 1 139 10 116726249 116728098 GATCAATTGCAGTGCTCTG 59 116725659 116725678 TATACTGGGACAGATCTCGG 59 NA Nonspecific Mus musculus 50 Arid1b ENSMUSG00000069729 ENSMUST00000092723,ENSMUST00000115799 1 2 3 91 17 5337301 5339227 AGATATTGTTACTCCCGAGG 58 5339281 5339299 TATTGATGGTGTCCAGAGC 59 NA Mus musculus 50 Olfr894 ENSMUSG00000070311 ENSMUST00000093866 2 1 1 60 9 38027275 38027296 ACCCTCTTATTTATAGCCTCAG 58 38027316 38027335 TTCCAGGATTTCTTCATAGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Slc17a7 ENSMUSG00000070570 ENSMUST00000085374 2 1 1 109 7 52426107 52426225 TATGTCTATGGCAGCTTCG 59 52426298 52426316 TCAATGTATTTGCGCTCCT 59 NA Mus musculus 50 NP_001074794.1 ENSMUSG00000070810 ENSMUST00000076576 1 1 1 81 7 14835796 14838762 CAAAGCTAAGGTGATCTATCTC 58 14835736 14835754 AAGATTTGTGTTAGCCCAG 57 NA Mus musculus 50 V1rj3 ENSMUSG00000070817 ENSMUST00000094829 2 1 1 60 7 13669874 13669892 TCCTCTCAGAAGTCTCCAG 59 13669832 13669850 AGCAGTTTACAAGCAACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000072658 ENSMUSG00000072658 ENSMUST00000100773 3 1 1 60 15 10532901 10532920 CAGACAGCTATGGATCTGTC 59 10532941 10532961 CTTGATATTCGTCTGTAGGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC040756 ENSMUSG00000073390 ENSMUST00000097315 2 1 1 114 17 46487608 46491390 ATTATAACACGGCACAAGC 58 46491468 46491486 TCAAACTGATGTGACACCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Trim40 ENSMUSG00000073399 ENSMUST00000087158 3 1 1 122 17 37020994 37025798 ACTACAAGGAAAGACTCAACC 59 37020291 37020309 TGTGACACTCACAATCCAC 59 NA Mus musculus 50 Zfp414 ENSMUSG00000073423 ENSMUST00000073570 1 1 1 82 17 33767618 33768086 CTACTTCAAGTGTGAGAATTGC 59 33768126 33768147 CATGGTCTATACAAACATGCAG 59 NA Mus musculus 50 ENSMUSG00000073473 ENSMUSG00000073473 ENSMUST00000097433 2 1 1 114 17 4941868 4941886 AACTCATGGAAGAATGGCA 59 4941961 4941982 GCTCAGCATGTTTATTACAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1329 ENSMUSG00000073767 ENSMUST00000071979 3 1 1 60 4 118589172 118589191 AGGAACAAGGACATCAAGAG 59 118589131 118589151 ATGAATCTACCCTAGCATGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Iqck ENSMUSG00000073856 ENSMUST00000106547,ENSMUST00000106546 1 2 2 86 7 126021142 126021160 CATCTTTCCAGTTCTGCTC 58 126021209 126043160 AATTTGGTTCTCTTCCTCTC 57 NA Nonspecific Mus musculus 50 Iqck ENSMUSG00000073856 ENSMUST00000106547,ENSMUST00000106546 2 2 2 60 7 126043148 126043167 AGAGAACCAAATTCATTGCC 58 126043189 126043334 TTCGGATTCTGGTTGTACAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Olfr472 ENSMUSG00000073893 ENSMUST00000084760 1 1 1 60 7 115046569 115046587 TTCTTACTGGCTGCTATGG 59 115046610 115046629 AATAGAGGAGAGGTGAACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cyp2a4 ENSMUSG00000074254 ENSMUST00000098657 2 1 1 124 7 27093998 27094016 TTAGCTCAATCGTCTTCGG 59 27094103 27095739 AAACATCTCATAGACCTGCC 59 NA Mus musculus 50 EG667283 ENSMUSG00000074316 ENSMUST00000098729 2 1 1 71 7 22397913 22399690 GAGGCTCAGAAGATTTCCC 59 22399725 22399743 AAGTACCATGGAGACACTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 1500012F01Rik ENSMUSG00000074578 ENSMUST00000099074 1 1 1 105 2 166889220 166890670 GTCTTAAGGTTTGCTGACAG 58 166890954 166890972 AAGATCAGACCAACACCTG 59 NA InUTR Mus musculus 50 Defb23 ENSMUSG00000074681 ENSMUST00000099206 1 1 1 85 2 152285317 152290277 AAATCAGAATTTGCGACCG 59 152285250 152285268 TGCATCTGGGTTTCATCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1248 ENSMUSG00000075080 ENSMUST00000099770 3 1 1 60 2 89457805 89457824 TTGCTTGTGACATATACCCA 59 89457764 89457783 AGTCCAAGGAAGTAAGTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1221 ENSMUSG00000075102 ENSMUST00000099795 3 1 1 60 2 88952160 88952179 GCAATTACCATTCTGTGGAC 59 88952119 88952137 TAATGGGAACAAGTCACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1170 ENSMUSG00000075133 ENSMUST00000099831 3 1 1 60 2 88064666 88064686 CTCTCCTATTGTGAATATGGC 57 88064626 88064646 AGATGACAGCAGAATACTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1128 ENSMUSG00000075156 ENSMUST00000102624 1 1 1 72 2 87385640 87385658 GTTAGGACTTTCTGGCAGG 59 87385586 87385605 AGTTATGCCGTAAACAAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000011664 ENSMUSG00000075514 ENSMUST00000100373 3 1 1 61 2 20891731 20891750 AAGAAGAAACTGAACCTCAC 57 20891774 20891792 TGTAAATTCTGTCTGCCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sox19 ENSMUSG00000076431 ENSMUST00000067230,ENSMUST00000110326 1 2 2 66 13 29044558 29044576 GATTCCGTTCATCCAGGAG 59 29044510 29044529 CTTGTAGTCAGGGTAGTCAG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 TRBC1 ENSMUSG00000076490 ENSMUST00000103291 3 1 1 61 6 41488557 41488575 ACAGAACATCAGTGCAGAG 59 41489119 41489236 GATAGGATGCTGAGGTAATCC 59 NA DesignRelaxed Mus musculus 50 IGKV9-120 ENSMUSG00000076515 ENSMUST00000103316 2 1 1 113 6 68000020 68000159 TCTTGTTTCCAGGTACCAG 58 68000236 68000254 TACCAATGTCCTGACTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV5-37 ENSMUSG00000076571 ENSMUST00000103372 1 1 1 86 6 69913599 69913820 TTTCTGGATTTCAGCCTCC 59 69913531 69913549 AGACTGACTGTTTCTCCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV10-1 ENSMUSG00000076683 ENSMUST00000103492 2 1 1 61 12 115717420 115717438 TCAGCTTCAATACCTACGC 59 115717377 115717395 CCATTCCAAACCCTTTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV6-1 ENSMUSG00000076762 ENSMUST00000103571 1 1 1 61 14 53258219 53258347 GATGCTGTTTGTGTTTGGG 59 53258372 53258390 TCACTTGACCTTGCATCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV12D-3 ENSMUSG00000076785 ENSMUST00000103595 1 1 1 60 14 53549826 53549844 CTTCACAGACAACAAGAGG 57 53549868 53549886 GCTGCTCTTATGGAGAGTG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A2A592_MOUSE ENSMUSG00000078132 ENSMUST00000104931 1 1 1 67 11 99420748 99420766 TTCCTATCTGCAAGGATGC 59 99420699 99420717 ATATGTCAGAGGAGCAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000016789 ENSMUSG00000078337 ENSMUST00000105130 1 1 1 60 X 10902030 10902048 GGTACAGAACAACGAACAG 58 10902072 10902090 CTCATTCACTGATGTGCCA 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 4933403G17Rik ENSMUSG00000078387 ENSMUST00000105177 1 1 1 60 7 26183032 26183050 GACTACATCTACAGCCCAG 58 26182990 26183008 GTTAGTTTGGGTAGAGGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 4933403G17Rik ENSMUSG00000078387 ENSMUST00000105177 2 1 1 60 7 26182876 26182894 GTCAGGGTTTCTAACAAGG 57 26182834 26182852 CTTCCACTCTGGAGATGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2210404O07Rik ENSMUSG00000078439 ENSMUST00000105322 3 1 1 123 10 80856593 80856611 AGTCTTCATCCTCATGCTG 59 80856890 80857533 CTTGTCTGCTTTACTTGGC 59 NA Mus musculus 50 NM_198011.1 ENSMUSG00000078580 ENSMUST00000074249 3 1 1 80 7 134536023 134536526 AAGTCCACTCAGATTGCAG 59 134535961 134535982 GAGAAAGTATCTTCTTGGTTGC 59 NA Nonspecific Mus musculus 50 NP_001092785.1 ENSMUSG00000078626 ENSMUST00000106916 1 1 2 139 4 101640643 101640661 CACATGGTAGCAAATTGGC 59 101640376 101640540 AGTCTACACCTCTTAGGCC 59 NA Mus musculus 50 MGI:1922798 ENSMUSG00000078782 ENSMUST00000053562 2 1 1 63 7 28231061 28231079 CCAAGTATCCTCCATTGGG 59 28231016 28231035 GTGCTTTGATTTCCTTTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 LOC623198 ENSMUSG00000079094 ENSMUST00000110599 2 1 1 72 5 147303421 147303439 TATTTCTTGGCGTCTACCG 59 147303474 147304031 GATGCATACGTTCTCATCAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Rab9 ENSMUSG00000079316 ENSMUST00000049435,ENSMUST00000112189 3 2 2 68 X 162895724 162895742 AGTTCGAAGAATTCTGGCC 59 162895674 162895692 TGCAGATTGACTGTGTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zmiz1 ENSMUSG00000079331 ENSMUST00000100825 3 1 1 141 14 26280410 26280428 TCTGGTTTACAGTTCCACC 59 26280533 26280551 CATCGAAGCAGAGATCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cml3 ENSMUSG00000079495 ENSMUST00000087656 3 1 1 220 6 85759704 85759814 AGTCTAAATGTTCAGAGCTG 57 85759140 85759158 CGGATATGATAAGGAGCCA 58 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 mmu-mir-466i ENSMUSG00000080574 ENSMUST00000116924 1 1 1 109 13 17839311 17839329 ATCATGTCAGTGAACTGCC 59 17839401 17839420 TGTTGCATACATGTAGTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ins2 ENSMUSG00000000215 ENSMUST00000105934 3 1 4 94 7 149885397 149885415 TACAGCACCATTGTCTCTG 59 149865434 149885340 GCCATGTTGAAACAATAACC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Tspan32 ENSMUSG00000000244 ENSMUST00000009396,ENSMUST00000075172 1 2 7 173 7 150201494 150201512 TTGTGGGAAGAAATCTCCT 58 150203182 150203494 ATAGCATATACCGTGAGGG 57 NA Mus musculus 50 Rgs19 ENSMUSG00000002458 ENSMUST00000108778 3 1 5 124 2 181426427 181426445 CTAGGGATTCTCCACATGG 58 181426196 181426214 TGTTTCTCAGCCTCATGTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Tsc2 ENSMUSG00000002496 ENSMUST00000088420,ENSMUST00000097374,ENSMUST00000115292,ENSMUST00000115291,ENSMUST00000115290 3 5 7 82 17 24739087 24739106 GTACAAGTCATTGTCAGTGC 59 24738387 24739041 GAGGAGAAAGAAGCCACTG 59 NA Mus musculus 50 Zfp287 ENSMUSG00000005267 ENSMUST00000101061 3 1 4 85 11 62536425 62538306 TAATCCAGGACGACAAACC 59 62536358 62536376 AGCAGGAACAACTCATGAC 59 NA Mus musculus 50 AA536749 ENSMUSG00000005417 ENSMUST00000066330,ENSMUST00000116370 1 2 8 163 11 59574823 59577893 TCTCAAGGCTACATGTGAG 58 59578019 59578918 CTTCAATGGCTGATATGGTG 58 NA Mus musculus 50 Fcer2a ENSMUSG00000005540 ENSMUST00000074396 2 1 5 175 8 3688857 3689793 CACTGCAATTCAGAATGTCTC 59 3688147 3688165 GGAGTCTGTTCAGGTTCTG 59 NA Mus musculus 50 BC003331 ENSMUSG00000006010 ENSMUST00000111913,ENSMUST00000097547,ENSMUST00000094477 2 3 4 64 1 152227477 152227495 GGAAATACGCAAGCAACTG 59 152222744 152227449 GAATTCAGGAGCAACTGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 2310043J07Rik ENSMUSG00000006143 ENSMUST00000111137,ENSMUST00000006303 2 2 2 80 5 136536085 136536103 ATGACAACAACTGTTCCCT 59 136536144 136537066 CCAGGAATTTCACTCTATAGGG 59 NA Mus musculus 50 Tek ENSMUSG00000006386 ENSMUST00000102798,ENSMUST00000071168 1 2 3 81 4 94465958 94470981 CTGATTGTTCGGAGATGTG 58 94471026 94471044 AGACTCCATTGTTCTTGCA 59 NA Mus musculus 50 Nf2 ENSMUSG00000009073 ENSMUST00000109910,ENSMUST00000056290,ENSMUST00000053079,ENSMUST00000093374,ENSMUST00000109908 2 5 6 92 11 4699928 4699947 ATCTATGACCCTGAGAACAG 58 4694912 4699874 AATAGTAAACTCCTTGTCGC 57 NA Mus musculus 50 Tcfcp2 ENSMUSG00000009733 ENSMUST00000108921,ENSMUST00000009877 3 2 3 81 15 100336680 100342135 CAGCGATGAGATGGTACAG 59 100334855 100334874 ATAGCTGTCACTGGTTTCTG 59 NA Mus musculus 50 Brms1l ENSMUSG00000012076 ENSMUST00000059250,ENSMUST00000012220 1 2 2 80 12 56945442 56945460 AAGCACCAGAGTATTTGGA 58 56945502 56946282 CTCTATAGATTCCTGCTACCT 57 NA Mus musculus 50 Dhdds ENSMUSG00000012117 ENSMUST00000012262,ENSMUST00000105887,ENSMUST00000105889,ENSMUST00000105885 1 4 5 91 4 133548486 133550085 GGAAGAACAGGAGAAGCTG 59 133548413 133548431 CAATCTTCTCCTGGAGGTC 59 NA Mus musculus 50 Dguok ENSMUSG00000014554 ENSMUST00000113888,ENSMUST00000014698 1 2 3 104 6 83437050 83437068 CATCTATCAGGACTGGCAC 59 83431443 83436982 CTCTCCATACAAACCTGGG 59 NA Mus musculus 50 Slc12a5 ENSMUSG00000017740 ENSMUST00000017884,ENSMUST00000099092,ENSMUST00000109311 1 3 3 127 2 164801948 164801967 ACATGATTTCCAGGTCTCTG 59 164802057 164804790 GAAGAGATAAGCCAGCAGG 59 NA InUTR Mus musculus 50 1700081L11Rik ENSMUSG00000018412 ENSMUST00000106977,ENSMUST00000018556,ENSMUST00000106972,ENSMUST00000106971,ENSMUST00000106974,ENSMUST00000069188 2 6 7 84 11 104197585 104197604 AATGTGAGGAGATGGAAAGG 59 104196999 104197538 GATGACCTGTAAGACCTGC 59 NA Mus musculus 50 Adora2b ENSMUSG00000018500 ENSMUST00000018644 3 1 1 60 11 62079088 62079106 CCATTGTCTATGCCTACAG 57 62079130 62079148 CTGGAGATGATCTTGTGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cog1 ENSMUSG00000018661 ENSMUST00000106623,ENSMUST00000018805,ENSMUST00000063776 1 3 3 80 11 113522355 113522460 CAGTCAGATCAGGTTTGGA 58 113522504 113522522 GTTTCAACGCTTCTACTGG 58 NA Mus musculus 50 Tnfsf12 ENSMUSG00000018752 ENSMUST00000094070,ENSMUST00000108650,ENSMUST00000102587 2 3 5 189 11 69507033 69507130 TTATGAGGTTCATCCTCGG 58 69500573 69500591 CTTTCCCTCATCAAAGTGC 58 NA Mus musculus 50 Ush1g ENSMUSG00000018862 ENSMUST00000106543 1 1 2 107 11 115202362 115205613 GAAGTTCTCAGGTAACGGG 59 115205684 115205702 CAGTACTCAGTGCTGAAGG 59 NA Mus musculus 50 Epyc ENSMUSG00000019936 ENSMUST00000020094,ENSMUST00000105285 1 2 2 80 10 97112428 97112446 TGTATGATGCCATCTTGGA 58 97112489 97133141 CTTTCTCGTTCTCTACATGG 57 NA Mus musculus 50 Rhobtb1 ENSMUSG00000019944 ENSMUST00000067908 2 1 2 107 10 68742145 68742163 TCTACACCAAGCAGTTGTC 59 68742234 68751707 CATTGTGAAACTGGAGAGC 58 NA Mus musculus 50 Srgn ENSMUSG00000020077 ENSMUST00000105446,ENSMUST00000020271,ENSMUST00000105445 3 3 3 73 10 61960533 61960551 GCCCTCCCATGAATAATCC 59 61957806 61957827 CCCATAGTCATCATAATTGGAG 58 NA DesignNoJunction Mus musculus 50 Spnb2 ENSMUSG00000020315 ENSMUST00000006629,ENSMUST00000011877 3 2 5 82 11 30003296 30003314 GTTTGAAAGAGGCCATCTG 58 30001640 30003253 GTTTCCATCACTTAGTCTTAGC 58 NA Mus musculus 50 Zfp354a ENSMUSG00000020364 ENSMUST00000020628,ENSMUST00000102766 3 2 5 88 11 50873582 50873601 TCATCTTCACCCATCTTTGG 59 50873652 50874375 AATGTCAACGACACCTGAG 59 NA InUTR Mus musculus 50 Efemp1 ENSMUSG00000020467 ENSMUST00000020759 3 1 2 83 11 28815710 28815730 CATTCTTGGCTCATTCATCTG 59 28815775 28816862 CATTCGTCGATGTCTTCAC 58 NA Mus musculus 50 Tom1l1 ENSMUSG00000020541 ENSMUST00000020849,ENSMUST00000107868 2 2 4 83 11 90532511 90534161 TTAGTCCCAGAACAGATCG 58 90532446 90532466 CATCAATATGGCTGTCATCAC 59 NA Mus musculus 50 Acox1 ENSMUSG00000020777 ENSMUST00000066587,ENSMUST00000021129 2 2 3 82 11 116043329 116044790 GAGATGGGTCATGGAACTC 59 116043265 116043285 CTGTTGAGAATGAACTCTTGG 58 NA Mus musculus 50 Krt36 ENSMUSG00000020916 ENSMUST00000107416 2 1 3 89 11 99965800 99965818 TGACCAAGTCTGAGAATGC 59 99965503 99965747 ACTCCGTCTCATACTTGGT 59 NA Mus musculus 50 Acly ENSMUSG00000020917 ENSMUST00000100457,ENSMUST00000107387 1 2 5 80 11 100380478 100380942 GAGGACAAGAAAGAGGTCC 59 100380416 100380436 CTCAAGGTAGGTGAAGTACAG 59 NA Mus musculus 50 Nfkbia ENSMUSG00000021025 ENSMUST00000021413 1 1 1 62 12 56591418 56591436 ATGAGGAGAGCTATGACAC 58 56590938 56590956 CACAGTCATCATAGGGCAG 59 NA DesignNoJunction Mus musculus 50 Zkscan3 ENSMUSG00000021327 ENSMUST00000116433,ENSMUST00000019612 3 2 5 156 13 21486386 21486404 GCTCACATCGGAATTACAG 58 21485651 21485836 AATAGAAACCCTAACCAGGG 58 NA Mus musculus 50 Slc6a19 ENSMUSG00000021565 ENSMUST00000022048 1 1 2 80 13 73826599 73826961 TTTCACACCCAATATCACAG 57 73826538 73826557 AGTGAGAAGGAGTAGAAGAC 57 NA Mus musculus 50 Sfrs12ip1 ENSMUSG00000021716 ENSMUST00000022230 2 1 1 60 13 105617141 105617159 ACAAGGACAATGTCAGAGC 59 105622934 105622952 TCGAAAGTCAGATGACCAG 59 NA DesignNoJunction Mus musculus 50 Ktn1 ENSMUSG00000021843 ENSMUST00000111744,ENSMUST00000111743 3 2 6 167 14 48344359 48344377 GATGCACACTTTGCTACAG 59 48344643 48345917 TCTCTTTCTCTTCTCAGCTG 58 NA Mus musculus 50 Ppp3cc ENSMUSG00000022092 ENSMUST00000078434,ENSMUST00000022685 3 2 2 81 14 70656216 70656234 ATTGTTTCTGCTTCGAGGA 59 70647513 70656173 ATACTTGATCCGACATTCCTG 59 NA Mus musculus 50 Grhl2 ENSMUSG00000022286 ENSMUST00000022895,ENSMUST00000110353 3 2 3 99 15 37258057 37258076 ATTCAGATCGACACGTACAG 59 37258138 37265469 TTCTTTCTGCTCCCTTGTC 59 NA Mus musculus 50 5730410E15Rik ENSMUSG00000022340 ENSMUST00000090057,ENSMUST00000110267 1 2 4 112 15 44550523 44577801 TTCTGCTCAGATGACACAG 59 44550429 44550447 AAGTCTTCATCGCTTCCAG 59 NA Mus musculus 50 Il1rap ENSMUSG00000022514 ENSMUST00000023156 3 1 2 111 16 26712250 26712268 GAAGAGGAATTTGTGCTGC 59 26712342 26714801 TCTCATCTGTGACAATTCCC 59 NA Mus musculus 50 Gcet2 ENSMUSG00000022659 ENSMUST00000023339 1 1 2 152 16 45610665 45616074 GACAACCAGATACTTCAGGG 59 45618952 45619947 TTAGCATTGTCCTGAACGG 59 NA Mus musculus 50 Ivns1abp ENSMUSG00000023150 ENSMUST00000023918,ENSMUST00000111887 3 2 3 81 1 153201152 153201171 GACGCTTATATTCAGGAGCA 59 153201213 153201773 TTACCTCCAACTTTAGTCTCG 59 NA Mus musculus 50 A830023I12Rik ENSMUSG00000023284 ENSMUST00000112528,ENSMUST00000086686 1 2 3 80 5 110552892 110553384 CTTCTTGGGTAATCAAACCAC 59 110553423 110553444 CATTCTTCATCCATTATCCGTG 59 NA Mus musculus 50 Nfya ENSMUSG00000023994 ENSMUST00000046719,ENSMUST00000078800 3 2 2 83 17 48531365 48531674 AATGGTCATGATGGTACCAG 59 48531301 48531319 TCTTCTTCCAGCATCTCTG 58 NA Mus musculus 50 Epb4.1l3 ENSMUSG00000024044 ENSMUST00000024843 2 1 6 136 17 69615646 69615664 CTTCTCAGTACCATACGCC 59 69615764 69619960 CACTGTCAGTCTCTTCCTC 59 NA Mus musculus 50 Sfrs7 ENSMUSG00000024097 ENSMUST00000063417,ENSMUST00000112421,ENSMUST00000063403 3 3 3 85 17 80603703 80603721 ATCTAGATCCCATTCCCGA 59 80603556 80603655 GAGATGCTGATCTTGACCTC 59 NA Mus musculus 50 Gabbr1 ENSMUSG00000024462 ENSMUST00000025338 1 1 2 112 17 37207711 37208801 TATCTACAATGTTGCGGTCC 59 37208876 37208894 AGGAAGAGAACACAATGGC 59 NA Mus musculus 50 Ms4a4c ENSMUSG00000024675 ENSMUST00000099672 1 1 2 233 19 11490900 11490918 TCTGTGGTCTTAATGGCTC 58 11493602 11500697 CACTACAAGAACCTTGGTG 57 NA DesignRelaxed Mus musculus 50 Aldh3b1 ENSMUSG00000024885 ENSMUST00000051803,ENSMUST00000100035 3 2 2 162 19 3915382 3918049 GAAGCCAGGTTATCAAACAG 58 3914030 3914048 TTGGAGAAGGTGTCAAAGG 59 NA Mus musculus 50 Saps3 ENSMUSG00000024908 ENSMUST00000113997 3 1 2 84 19 3478353 3484840 GGTAGATCTAGTTACAACCTGC 59 3478290 3478308 GGAATCCTGTGAGAAACCC 59 NA Mus musculus 50 Cep55 ENSMUSG00000024989 ENSMUST00000116506 3 1 2 155 19 38145612 38145630 GTAGCTCTACTGGAACAGC 59 38146371 38147799 ATGTAGCTGCAAGGATTCC 59 NA Mus musculus 50 Aspscr1 ENSMUSG00000025142 ENSMUST00000026135,ENSMUST00000106159,ENSMUST00000106158 3 3 5 184 11 120534480 120535367 TGCAGGTACTAGAAGACAC 58 120538929 120539742 GATGCGAACTATGTTCTCAG 58 NA Mus musculus 50 Stra13 ENSMUSG00000025144 ENSMUST00000055424,ENSMUST00000106154,ENSMUST00000106155 1 3 4 120 11 120573067 120573172 ATTGCAAGACCAAAGTCAG 58 120572741 120572759 ACAACATCCAGGTCTTCTG 59 NA Mus musculus 50 Tro ENSMUSG00000025272 ENSMUST00000087253 1 1 5 166 X 147080658 147084022 TAACTGCCTAACAAGTGGTG 59 147080511 147080529 TATTTGGTCCTCCAAAGCC 59 NA Mus musculus 50 Tro ENSMUSG00000025272 ENSMUST00000087253 2 1 5 167 X 147080659 147084022 TAACTGCCTAACAAGTGGT 58 147080510 147080528 GTATTTGGTCCTCCAAAGC 58 NA Mus musculus 50 Crisp3 ENSMUSG00000025433 ENSMUST00000116593,ENSMUST00000026499 3 2 2 91 17 40372893 40376139 TAACTCTCAGGAGAACAGTC 58 40372821 40372839 TTCGTCTCAATTGGTTGTG 58 NA Mus musculus 50 Tm9sf2 ENSMUSG00000025544 ENSMUST00000100295 3 1 2 80 14 122554589 122554609 TTCACAGCTGTTCTTCCTG 59 122554653 122554671 AGGATTGTACTTGCTGTCC 59 NA Mus musculus 50 Tspan17 ENSMUSG00000025875 ENSMUST00000026993,ENSMUST00000099503 1 2 2 80 13 54897377 54897395 TGAGAAGTGGCTACAAGAC 58 54897438 54897531 CAGAGGCCAAATATCTGGAG 59 NA Mus musculus 50 Gria4 ENSMUSG00000025892 ENSMUST00000063508 2 1 2 182 9 4427138 4456018 GGTTCCTCATTAAGAACTCCT 59 4424401 4424419 CAGAATGTAGAAGACGCCT 59 NA Mus musculus 50 Sgk3 ENSMUSG00000025915 ENSMUST00000097826 3 1 2 96 1 9875824 9876135 GTACACCAGAGTACCTTGC 59 9876194 9876213 AGCATCTCATACAGAACAGC 59 NA Mus musculus 50 Nif3l1 ENSMUSG00000026036 ENSMUST00000064224 1 1 2 102 1 58514625 58514643 GTCCCAAGTCAAAGTTGTG 58 58537831 58537850 CTGTTTCCAAGAGACACTG 57 NA Mus musculus 50 Spata17 ENSMUSG00000026611 ENSMUST00000110950,ENSMUST00000027908 2 2 4 83 1 188872358 188921663 CTGACAAGGATTTCCAGAC 57 188872293 188872311 CAATTTCTCCAGCTTTCGA 58 NA Mus musculus 50 Frmd4a ENSMUSG00000026657 ENSMUST00000091497,ENSMUST00000115042,ENSMUST00000075767 3 3 5 81 2 4515744 4515762 AATGCAATCAACGAGAACC 58 4515804 4518395 CGATATTTCCATCATCGATGAC 59 NA Mus musculus 50 Dnm1 ENSMUSG00000026825 ENSMUST00000091089,ENSMUST00000035664 2 2 9 83 2 32179182 32179200 AGACTTCATAGGCTTTGCC 59 32176127 32178949 TTTCGAATGACCTGGTTCC 59 NA Mus musculus 50 D730039F16Rik ENSMUSG00000026870 ENSMUST00000113068,ENSMUST00000028228,ENSMUST00000047447 3 3 3 60 2 34737916 34737934 TGTCAACTGTCCCAATGAG 59 34741391 34741409 CTTCTTATCCAGGATGGCC 59 NA DesignNoJunction Mus musculus 50 Strbp ENSMUSG00000026915 ENSMUST00000072186,ENSMUST00000028279 3 2 2 80 2 37442067 37446187 TATAGCTCCAGGTTACGGA 59 37439602 37439621 AACAGAACCATTCTCTTGGG 59 NA Mus musculus 50 Inpp5e ENSMUSG00000026925 ENSMUST00000116559 1 1 3 80 2 26254129 26254147 TGGGATCAAGACTTCAGAC 58 26252409 26254085 GGACAGTACTTGTCTCGTC 59 NA Mus musculus 50 Pmpca ENSMUSG00000026926 ENSMUST00000076431 2 1 2 125 2 26248857 26248876 TATGAAGATACAGGCCTCCT 59 26249094 26250556 CTCTAGCTCCACCAAATCC 59 NA Mus musculus 50 Camsap1 ENSMUSG00000026933 ENSMUST00000114167,ENSMUST00000091268 3 2 5 103 2 25791445 25791463 GGCAAACCTAAATCAAAGC 57 25791072 25791380 CTCAAGTTATGGGTAGAAGAG 57 NA Mus musculus 50 Lrp4 ENSMUSG00000027253 ENSMUST00000111341,ENSMUST00000028689 3 2 2 80 2 91326052 91326071 ACGTGTATTGGACAGATGTC 59 91326114 91326257 TATCCACTACCACCTCCTG 59 NA Mus musculus 50 Gabpb1 ENSMUSG00000027361 ENSMUST00000103228 1 1 10 103 2 126479364 126479382 TAAGTAGAGATGCCAGGAC 57 126475906 126479298 CTCCTGTTTCATCTTAAGCA 57 NA Mus musculus 50 1700030G11Rik ENSMUSG00000027517 ENSMUST00000029022,ENSMUST00000109112 3 2 2 115 2 173398078 173398096 AGTTCTACGATGTCATCCC 58 173396700 173397999 AAGACATGACATCTTGCTG 57 NA Mus musculus 50 Lmna ENSMUSG00000028063 ENSMUST00000029699,ENSMUST00000036252 3 2 2 153 3 88290547 88290742 CATTTACAGCGAGGAACTG 58 88290412 88290431 CTTATACTGTTCCACCTGGT 58 NA Mus musculus 50 Dclk2 ENSMUSG00000028078 ENSMUST00000029719,ENSMUST00000098983,ENSMUST00000094144 3 3 3 82 3 86635703 86635721 TCAGCTGCGAAGTATTCTG 59 86628637 86635657 CTGGGAGTTCCATTCACTG 59 NA Mus musculus 50 Asph ENSMUSG00000028207 ENSMUST00000108337,ENSMUST00000084915,ENSMUST00000108335,ENSMUST00000108334,ENSMUST00000108333 3 5 17 160 4 9525429 9525447 GGAAGTAAGACACCAAGAC 57 9504112 9510969 TTTAAGTATCTGGTGGTGTG 57 NA Mus musculus 50 Cdh17 ENSMUSG00000028217 ENSMUST00000029871,ENSMUST00000108303 3 2 2 82 4 11731258 11734586 CTGACTGTGAGTTATTCACTG 58 11734629 11734648 GCAGCACTAAATATCTCACC 58 NA Mus musculus 50 2410005O16Rik ENSMUSG00000028229 ENSMUST00000029888 2 1 2 81 4 19528552 19528570 GTGCTGTTTGCAAATCCTC 59 19529812 19532561 AGTTTGGATCCACTTCTTCTG 59 NA Mus musculus 50 Ccnc ENSMUSG00000028252 ENSMUST00000065928,ENSMUST00000051664,ENSMUST00000102997,ENSMUST00000108240,ENSMUST00000029916 2 5 5 84 4 21670448 21673501 CATGATCGCTTTAGCTTGC 59 21673549 21673567 ATCCACAGAAAGTTCTGCA 59 NA Mus musculus 50 1300002K09Rik ENSMUSG00000028327 ENSMUST00000107783,ENSMUST00000107782,ENSMUST00000030011,ENSMUST00000095099 1 4 4 80 4 45886663 45890787 GCGTTACTAAAGGAGTCTG 57 45890831 45890849 AGGCTAGAATGTGGAAGAG 58 NA Mus musculus 50 Kif24 ENSMUSG00000028438 ENSMUST00000108055,ENSMUST00000051409 3 2 3 87 4 41356821 41356839 GAAGATAGCAAGCATGTGG 58 41351819 41356772 CCTTTAAGATCACCTGTAGGA 58 NA Mus musculus 50 Clta ENSMUSG00000028478 ENSMUST00000107845,ENSMUST00000107846,ENSMUST00000107851,ENSMUST00000107849,ENSMUST00000107847,ENSMUST00000078664 2 6 6 85 4 44031710 44032751 TGAATACTACCAGGAGAGC 57 44032800 44032818 TACTTTCAGGCTCTGACTG 58 NA Mus musculus 50 Usp24 ENSMUSG00000028514 ENSMUST00000094933,ENSMUST00000106798 1 2 2 81 4 106013913 106013931 GGTCTATCCCGTACAAGAG 58 106013976 106014956 TCTGAAAGACCAAGTCTGG 58 NA Mus musculus 50 Trit1 ENSMUSG00000028653 ENSMUST00000102649,ENSMUST00000082012 1 2 2 110 4 122724159 122724177 AATTCCTTCATCGTCAGCA 59 122724251 122726020 CATCTAGAACTGCCTGGTC 59 NA Mus musculus 50 Capzb ENSMUSG00000028745 ENSMUST00000102507,ENSMUST00000102508,ENSMUST00000030519,ENSMUST00000116268,ENSMUST00000030518,ENSMUST00000042675 2 6 6 92 4 138813287 138817906 GACTCCTATAGGTCACCGT 59 138817962 138817980 CTCTACCTCCAGCTTTCTG 59 NA Mus musculus 50 Srrm1 ENSMUSG00000028809 ENSMUST00000105861,ENSMUST00000084846,ENSMUST00000105862,ENSMUST00000030613,ENSMUST00000097847 1 5 5 80 4 134900578 134902661 CTGGAAGTGAAGAACCCAG 59 134900516 134900537 GAATTCTCTAGCATTCTTCCCA 59 NA Mus musculus 50 Eya3 ENSMUSG00000028886 ENSMUST00000105926,ENSMUST00000020197 1 2 6 121 4 132226162 132245629 TTCTGCAAACTTCAAGCAC 59 132248882 132248903 TCCAAGAATAGTATAGGTGGGA 59 NA Mus musculus 50 Inpp5b ENSMUSG00000028894 ENSMUST00000094782,ENSMUST00000106196 2 2 3 87 4 124461597 124461615 GTCAAACAGGAACATGCAG 59 124461666 124462429 CTCCTTTGTTACCCATCCT 58 NA Mus musculus 50 Ptpru ENSMUSG00000028909 ENSMUST00000105987,ENSMUST00000030741,ENSMUST00000105986,ENSMUST00000105985,ENSMUST00000105984 1 5 6 88 4 131379798 131379816 TATGACGACTTCCAATGGG 59 131376876 131376894 TTGACCATCAAGTAGGCAC 59 NA DesignNoJunction Mus musculus 50 Wdr8 ENSMUSG00000029029 ENSMUST00000030895 2 1 2 141 4 153525796 153525816 GACTATGTCAGCATCTTTGTG 59 153526525 153526679 GAACCTTGTACTCCAAGCA 59 NA Mus musculus 50 Ttll10 ENSMUSG00000029074 ENSMUST00000051509,ENSMUST00000105577,ENSMUST00000097731,ENSMUST00000030951 3 4 4 81 4 155421308 155421470 CGGAGCATCAATAATCAGC 58 155421245 155421263 TAGCTTGTAGTCCTCACAG 57 NA Mus musculus 50 Guf1 ENSMUSG00000029208 ENSMUST00000087228 3 1 3 105 5 69954371 69954390 GAAGCACAAATAGGAGACAC 58 69954458 69955777 CTATAGGGTACACTCCTGC 58 NA Mus musculus 50 Clock ENSMUSG00000029238 ENSMUST00000031148,ENSMUST00000113499,ENSMUST00000075159 1 3 4 80 5 76664842 76664862 GTTGGTCCATCATTAACACAG 59 76660565 76664801 AAACTGAAACTGTGACATGC 59 NA Mus musculus 50 Pxn ENSMUSG00000029528 ENSMUST00000067268,ENSMUST00000086523,ENSMUST00000112060 3 3 3 80 5 116002218 116002237 TACTGTGAGAAGGACTACCA 59 116002280 116002784 TGTCACCACTTTATCCAGG 58 NA Mus musculus 50 St7 ENSMUSG00000029534 ENSMUST00000115419 3 1 7 87 6 17872051 17872069 TGAAGCGATAGCATATGCA 59 17872120 17880779 GATCATCCGGAAAGAATGC 58 NA Mus musculus 50 Arpc1b ENSMUSG00000029622 ENSMUST00000110660,ENSMUST00000085679 3 2 2 64 5 145887792 145888513 ACAGTGTCAGCCAAATCTC 59 145888541 145888559 TGTAGTGCAGAACTGTGAG 59 NA DesignRelaxed Mus musculus 50 Tsc22d4 ENSMUSG00000029723 ENSMUST00000100540 3 1 4 82 5 138192585 138199918 CGATGACGATAGTGGTTCC 59 138203607 138203625 CTAGGTGTTTCCAGAACGG 59 NA Mus musculus 50 Ergic2 ENSMUSG00000030304 ENSMUST00000032447 2 1 2 155 6 148138035 148138056 CCGGGAATTATTAATCCTTTGG 59 148132688 148136564 AAGAGATCGCCTTTCTGTC 59 NA Mus musculus 50 Dyrk4 ENSMUSG00000030345 ENSMUST00000078521 3 1 3 85 6 126849893 126866316 CACCTCTGTGAAGGTTGAG 59 126849826 126849844 GACATCGGTTCACTCTCAG 59 NA Mus musculus 50 Psd3 ENSMUSG00000030465 ENSMUST00000059374 1 1 3 144 8 70237698 70237716 CTGAAGTCCCATGAAAGCA 59 70237249 70237591 GACCTAAACTCTCGAACTCC 59 NA Mus musculus 50 Prmt3 ENSMUSG00000030505 ENSMUST00000085271 1 1 3 83 7 57082192 57082210 AAGCAGTTATACCGGAAGC 59 57082255 57084311 TCCCATCCATCTTGATATCAC 59 NA Mus musculus 50 Unc45a ENSMUSG00000030533 ENSMUST00000107368,ENSMUST00000032748 1 2 2 81 7 87472516 87472534 AGGACTGCAGAACTTTGAG 59 87471297 87472471 CTTCAGGATCTTCTGCCTG 59 NA Mus musculus 50 Zranb1 ENSMUSG00000030967 ENSMUST00000106157,ENSMUST00000033265 1 2 2 80 7 140158311 140158330 CTACACTCTGGTACATCTGG 58 140158373 140162882 GCTTGCTGAGATACCTCTG 59 NA Mus musculus 50 Rbm3 ENSMUSG00000031167 ENSMUST00000115619 3 1 7 117 X 7718321 7720380 AAATGTAGGTGGATGAAGACTC 59 7718225 7718243 CTTCCTCTGACCAAGTACC 58 NA InUTR Mus musculus 50 Gpm6b ENSMUSG00000031342 ENSMUST00000112236,ENSMUST00000060210,ENSMUST00000112228,ENSMUST00000112229 3 4 12 81 X 162821867 162821887 TTCTACATGTCCTATCACCTG 58 162821930 162824899 TCATGAGGAAGTGGATCAG 58 NA Mus musculus 50 Rbbp7 ENSMUSG00000031353 ENSMUST00000033720,ENSMUST00000112326,ENSMUST00000112321 2 3 4 130 X 159206917 159207701 AGTGACAAGGGAGAATTCG 59 159207795 159207813 TTTGTGGCAATGATGTGAG 58 NA Mus musculus 50 1810037C20Rik ENSMUSG00000031399 ENSMUST00000114141 2 1 6 134 X 71633014 71633032 GAGCTTTCGAATAGTCAGC 58 71632435 71632785 GAAAGAACTGCATTCACCA 58 NA Mus musculus 50 Atp11a ENSMUSG00000031441 ENSMUST00000091237,ENSMUST00000033818 2 2 2 81 8 12828578 12828597 ATGTTTGATGAGGAAATGGG 58 12828641 12831097 AGATGTATTCCACCTGTCC 58 NA Mus musculus 50 Nr3c2 ENSMUSG00000031618 ENSMUST00000109915 1 1 4 107 8 79609465 79609483 TTCCAAGATCTGCTTGGTG 59 79609554 79679113 TAGTTGTGTTGTACGGCTC 59 NA Mus musculus 50 Mbtps1 ENSMUSG00000031835 ENSMUST00000081381,ENSMUST00000098362 1 2 2 80 8 122062856 122065500 CTTTACCAACAATCAGGTGTC 59 122062796 122062816 AGAACGTCCATCTTCTTTAGG 59 NA Mus musculus 50 Pgr ENSMUSG00000031870 ENSMUST00000098986,ENSMUST00000070463,ENSMUST00000098987 2 3 3 83 9 8903679 8903697 CATCTGGCTGTCACTATGG 59 8903743 8922613 AATAGTTATGCTGCCCTTCC 59 NA Mus musculus 50 Wdr59 ENSMUSG00000031959 ENSMUST00000038193,ENSMUST00000109151 2 2 3 95 8 113982941 113984492 TGGAACATAGCAGGAAGAG 58 113982864 113982882 GTCACTGTAGGTCAGACTC 58 NA Mus musculus 50 Mapkapk3 ENSMUSG00000032577 ENSMUST00000035194 3 1 3 80 9 107159467 107159757 CCTTGGATCAATCAATCCA 57 107159405 107159423 CCAGTGATCTTTGTCTTCC 57 NA Mus musculus 50 Nicn1 ENSMUSG00000032606 ENSMUST00000035227 2 1 1 65 9 108197279 108197297 GATGATTCGGGCTAGTCAC 59 108197399 108197418 AGATCATAACAGCCATCCAC 59 NA DesignNoJunction Mus musculus 50 Usp37 ENSMUSG00000033364 ENSMUST00000044260 3 1 2 99 1 74508209 74508227 TCATCCCAAGATTCCTGAC 58 74506543 74508147 AATGGTCTAGAAATTGCCAC 58 NA Mus musculus 50 Rbm9 ENSMUSG00000033565 ENSMUST00000063150,ENSMUST00000096360 2 2 5 95 15 76929737 76929755 CTTTCAAGCTGATGTGTCC 58 76928505 76929679 AAAGGGAGACTGATTAGAGG 58 NA Mus musculus 50 Igf2bp2 ENSMUSG00000033581 ENSMUST00000100052,ENSMUST00000115379 1 2 3 173 16 22161361 22162859 GGTAAAGTGGAATTGCATGG 59 22084050 22087608 ATCTGTGTTGACTTGCTCC 59 NA Mus musculus 50 Rpap2 ENSMUSG00000033773 ENSMUST00000112650,ENSMUST00000112651,ENSMUST00000112654,ENSMUST00000065422,ENSMUST00000112653,ENSMUST00000112655 3 6 6 119 5 108032599 108032618 ATCAAACTCTGTGGCTATCC 59 108032895 108035932 GCAGAAAGACTTCCTTTCAG 58 NA Mus musculus 50 Tesk2 ENSMUSG00000033985 ENSMUST00000106459,ENSMUST00000068353 1 2 5 80 4 116474343 116474361 GATGCTTTCCAGAACATGG 58 116474404 116477455 ATAGCCTCGAGAATTACAGC 59 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111696,ENSMUST00000111695,ENSMUST00000111694,ENSMUST00000111678,ENSMUST00000111677,ENSMUST00000111676,ENSMUST00000111687,ENSMUST00000111685,ENSMUST00000111684,ENSMUST00000111672 1 10 23 80 2 84443394 84443412 CTTTGGAGGAAGAGTTGGA 58 84443048 84443350 GCTAAATCTTCTGCATGGG 58 NA Mus musculus 50 Cd300a ENSMUSG00000034652 ENSMUST00000106582 3 1 2 118 11 114754899 114755980 GAGGACCCAGTTTCATCTC 59 114756061 114756080 GAATAGTCATGTTCACGGTG 58 NA Mus musculus 50 Mdga2 ENSMUSG00000034912 ENSMUST00000101379 2 1 2 80 12 67607799 67612986 CCTCATTTGAGGGAATTTCAC 59 67607739 67607759 GTCAAAGTTATCCGTATCGTC 58 NA Mus musculus 50 Tjp3 ENSMUSG00000034917 ENSMUST00000092280 3 1 2 114 10 80740786 80740806 TAAGAAGATGGCAGTCTCG 58 80740690 80740708 ACTACGTGGAAGACATCAC 59 NA Mus musculus 50 Midn ENSMUSG00000035621 ENSMUST00000042057,ENSMUST00000099492 1 2 2 80 10 79617210 79617889 CTTCTCTGGCACACTACAC 59 79617933 79617951 AGTATCTGCAGAATGGTGC 59 NA Mus musculus 50 H2-Q1 ENSMUSG00000035929 ENSMUST00000081435,ENSMUST00000113887,ENSMUST00000078205 1 3 3 103 17 35517034 35517052 GAAACACAGAAAGCCAAGG 59 35517306 35517324 ACCTGAATAGTGTGAGAGC 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Fmnl2 ENSMUSG00000036053 ENSMUST00000090952 3 1 3 100 2 52985926 52985944 ATTGCGGAATTAAGAAGGC 58 52986006 52990889 GGTTGGTTTCTAAGATCTGTG 58 NA Mus musculus 50 Cd200r3 ENSMUSG00000036172 ENSMUST00000114612,ENSMUST00000114613 1 2 6 81 16 44957882 44957900 GTGAAACTGGCTGTAACTG 58 44957944 44964775 TTGGTTCCTCATTTGATCTG 57 NA Mus musculus 50 Gng12 ENSMUSG00000036402 ENSMUST00000043148,ENSMUST00000114228,ENSMUST00000114227,ENSMUST00000114226,ENSMUST00000114225,ENSMUST00000114224,ENSMUST00000114222 3 7 7 125 6 66965821 66967462 CCATCGAAAGAATAAAGGTCTC 58 66967547 66967566 TCTTCTTATCCTTGAACGGG 59 NA Mus musculus 50 Nudt1 ENSMUSG00000036639 ENSMUST00000071881,ENSMUST00000050205,ENSMUST00000110827,ENSMUST00000110826 3 4 4 135 5 140811402 140813554 AGAAAGTGAAGAAATGCGC 59 140813653 140813671 ATCCTGGAACTTGAAGTGC 59 NA Mus musculus 50 2310002J15Rik ENSMUSG00000036731 ENSMUST00000043379,ENSMUST00000114356 3 2 2 60 2 25094902 25094921 TTCCTTCTTCATCTTCCTCC 58 25094861 25094879 TCTGGGATACATGTTCCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Abcc12 ENSMUSG00000036872 ENSMUST00000109667,ENSMUST00000080115,ENSMUST00000074742,ENSMUST00000109665,ENSMUST00000109663 2 5 5 80 8 89067781 89067799 AAGGTCTTGGGAATATGCG 59 89065352 89067737 CTGTAACTGCATCTGTCCT 58 NA Mus musculus 50 Abcc12 ENSMUSG00000036872 ENSMUST00000109667,ENSMUST00000080115 3 2 5 81 8 89031864 89032987 ACAGTAAGGTACAACTTGGA 58 89031802 89031821 CTCTCATGAACGTTCTTTCC 58 NA Mus musculus 50 Spryd3 ENSMUSG00000036966 ENSMUST00000044757 3 1 2 122 15 101948562 101948581 TCCGAAATGTCATGTACCTG 59 101948132 101948477 GAGTGAAGAAGACCACCAC 59 NA Mus musculus 50 Arhgap10 ENSMUSG00000037148 ENSMUST00000081524 1 1 3 80 8 79889048 79908658 CGGAAGGAGGTATAAATGACC 59 79888988 79889009 TCAACATACTCAGAAGTCTCTG 59 NA Mus musculus 50 BC061194 ENSMUSG00000037708 ENSMUST00000095132,ENSMUST00000035389 3 2 2 188 2 18664483 18667090 GACAGTTCAGTAAGGTGCT 59 18671098 18671118 GTATGTCTGAGTATCCAGGAG 58 NA Mus musculus 50 Rtkn2 ENSMUSG00000037846 ENSMUST00000105437 1 1 2 116 10 67468341 67468359 TAAGAAGCTGAAGACGTCC 59 67476655 67480565 TACTTTGCACCCAGAACTG 59 NA Mus musculus 50 Sbno1 ENSMUSG00000038095 ENSMUST00000065263 3 1 2 84 5 124863294 124864421 CTTCAGTTCAACAGTCGGT 59 124863228 124863246 TCTGGCTCTTGTTTGACAG 59 NA Mus musculus 50 Mphosph9 ENSMUSG00000038126 ENSMUST00000031344,ENSMUST00000072862 2 2 2 102 5 124765461 124765479 TCTCTAAAGGAAGACGGCT 59 124762832 124765394 GACTTACCACTATTTGCTTTCC 59 NA Mus musculus 50 Dcun1d2 ENSMUSG00000038506 ENSMUST00000110839 3 1 4 111 8 13261455 13271597 GGGCTTAGATTTAGAAATGGC 59 13257956 13257974 CTATAAGGACAGGCCATGC 59 NA Mus musculus 50 C030046E11Rik ENSMUSG00000038658 ENSMUST00000043610 1 1 2 80 19 29650378 29652077 AAGATCAACTCCATGAGCTG 59 29652120 29652138 AATCTGAGTGTGCTGAGAG 58 NA Mus musculus 50 Akap2 ENSMUSG00000038729 ENSMUST00000098066,ENSMUST00000030049 3 2 14 80 4 57701393 57702404 CTTGCAGAAGAGTTTCTCCA 59 57770503 57770521 TCTGCAGTCAGTTCATCTC 58 NA Mus musculus 50 Runx2 ENSMUSG00000039153 ENSMUST00000113576,ENSMUST00000113572,ENSMUST00000113571,ENSMUST00000077846,ENSMUST00000113568 1 5 5 117 17 44861777 44861795 ATGATGAGAACTACTCCGC 58 44854230 44861696 AAGGTGAAACTCTTGCCTC 59 NA InUTR Mus musculus 50 Runx2 ENSMUSG00000039153 ENSMUST00000113572,ENSMUST00000113571,ENSMUST00000113568 3 3 5 119 17 44776703 44776721 CCTATCTGAGCCAGATGAC 58 44747031 44776623 CAGTGTCATCATCTGAAATACG 59 NA Mus musculus 50 Tbcd ENSMUSG00000039230 ENSMUST00000103013 2 1 3 80 11 121464616 121464637 GATTGCCTACCTATAGATACCA 58 121464678 121464938 AATGTCTGACCGTAGACTC 58 NA Mus musculus 50 Il22ra2 ENSMUSG00000039760 ENSMUST00000105526,ENSMUST00000036564 2 2 2 146 10 19341903 19344224 GAAATACAACCAGCTCGTG 58 19344332 19346444 CTGTCCATACATCTTGTACTG 57 NA Mus musculus 50 Azi1 ENSMUSG00000039781 ENSMUST00000106227 3 1 2 242 11 119935150 119935168 ATCCATCAGGTAAACCAGG 58 119934279 119934449 TTTCTGTTGTTCCTGAATGG 58 NA DesignRelaxed Mus musculus 50 Tera ENSMUSG00000039985 ENSMUST00000081956,ENSMUST00000054080,ENSMUST00000111562 1 3 3 80 6 148874682 148877046 GAATTTAAACGCCACAACTC 57 148874621 148874639 CTGGTTACTGTAGCATGGA 58 NA Nonspecific Mus musculus 50 Orc3l ENSMUSG00000040044 ENSMUST00000048706,ENSMUST00000108144 2 2 3 117 4 34527077 34527096 TACTTCAGCGCTGTATTGAG 59 34525269 34526998 TCTTTGCTATCTGCATCGAG 59 NA Mus musculus 50 Orc3l ENSMUSG00000040044 ENSMUST00000048706,ENSMUST00000108144 3 2 3 118 4 34527077 34527096 TACTTCAGCGCTGTATTGAG 59 34525268 34526997 CTCTTTGCTATCTGCATCGA 59 NA Mus musculus 50 Gbp5 ENSMUSG00000040264 ENSMUST00000065526 3 1 3 106 3 142163700 142166792 GAAGGAGAAGGACTTGGTG 59 142166861 142166880 TCAGCTTCAGTGAATTCTCC 59 NA Mus musculus 50 Vprbp ENSMUSG00000040325 ENSMUST00000055009 1 1 2 85 9 106766067 106766857 GTATGGAGCAATGTTGCAG 59 106766906 106766924 ATGTTCGAAAGGATGACCC 59 NA Nonspecific Mus musculus 50 Aqr ENSMUSG00000040383 ENSMUST00000043160 1 1 2 82 2 113929845 113931546 CCTCCAGAAAGAATGGAGAG 59 113929782 113929800 GTTGTACACAAAGTTCGCC 59 NA Mus musculus 50 Pogk ENSMUSG00000040596 ENSMUST00000079972,ENSMUST00000111411 1 2 2 95 1 168338591 168338609 AGGAAGAGGTTGAGATCCA 59 168333740 168338532 CAAATAGAGCTGGTACCCA 58 NA Mus musculus 50 Lat2 ENSMUSG00000040751 ENSMUST00000036362 3 1 2 115 5 135081821 135081924 TCTACAAAGGAAGTAACCAGG 59 135079331 135079349 GTAGGAGTTGGAATCGTCG 59 NA Mus musculus 50 Tardbp ENSMUSG00000041459 ENSMUST00000055827,ENSMUST00000095719 1 2 6 90 4 147992817 147992837 GCTGAACCTAAGCATAATAGC 58 147991806 147992765 TGAGATGAACCTGATTCCC 58 NA Mus musculus 50 Gpx2 ENSMUSG00000042808 ENSMUST00000082431 1 1 1 62 12 77896254 77896272 GTGCTGATTGAGAATGTGG 58 77896210 77896228 ATTGAGCTGGTTGTAGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp513 ENSMUSG00000043059 ENSMUST00000114590,ENSMUST00000031562,ENSMUST00000087992 1 3 3 60 5 31504088 31504107 TACTGAAGATTCCTTCGACG 59 31504047 31504065 TAGTAGCAAATCGCTCTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Liph ENSMUSG00000044626 ENSMUST00000074230 2 1 2 91 16 21976369 21976388 TTTATTCAACGGGAGACCTC 59 21968217 21976317 ACTTTATACCGTCAGTGTCAG 59 NA Mus musculus 50 Lcn6 ENSMUSG00000045684 ENSMUST00000114199,ENSMUST00000114198,ENSMUST00000114197 3 3 4 140 2 25536307 25536326 ATGAGGTCTTCAACACAGTG 59 25536548 25536779 CACAAGTGAGGTCCTTCTG 59 NA Mus musculus 50 Pofut1 ENSMUSG00000046020 ENSMUST00000049863,ENSMUST00000099192,ENSMUST00000109794 3 3 4 105 2 153075518 153085342 ATGGACCCAGAGATTTCCT 59 153085411 153085429 CATGTACTTCTGGAGCTCC 59 NA Mus musculus 50 Zfp322a ENSMUSG00000046351 ENSMUST00000110436 3 1 3 194 13 23449575 23454460 GAGTTACAGAAGGTTTGGAG 57 23449400 23449421 GTGTACATCTTCTATGGTTCTC 58 NA InUTR Mus musculus 50 Tmem164 ENSMUSG00000047045 ENSMUST00000112891,ENSMUST00000112892 2 2 9 145 X 139186622 139205520 GTCATCTTCAAGTTACAGATGC 59 139267093 139267111 AAAGAACATGAGGCCAGTC 59 NA Mus musculus 50 Taf9b ENSMUSG00000047242 ENSMUST00000113495,ENSMUST00000055497 1 2 2 123 X 103414928 103414946 CTATCAAGAACGCTCCGAG 59 103413773 103414242 GTAGTCACATATCGGAAAGCA 59 NA Mus musculus 50 Gpr82 ENSMUSG00000047678 ENSMUST00000053659 1 1 1 147 X 13239534 13242150 TACTCAGACAGACGAAGGA 59 13242353 13242371 ATGGTTGAATGCATGTCGA 59 NA InUTR Mus musculus 50 Zcchc5 ENSMUSG00000047686 ENSMUST00000062010 1 1 1 60 X 104033847 104033865 GAGCAATTTGAAAGGCTCC 59 104033805 104033823 CCAAGCTTTCTGGATTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lonp2 ENSMUSG00000047866 ENSMUST00000034141 3 1 1 80 8 89158747 89158768 CTTGTTAGACAGATTGAAGGTC 58 89158809 89160386 TGCTATAACCCTCTTGTCG 58 NA Mus musculus 50 Frmd6 ENSMUSG00000048285 ENSMUST00000057859,ENSMUST00000061386 3 2 2 147 12 71994924 71995877 ATGAGGAAATCGAGATGCTG 59 71995986 71998338 ACAATTAACCCTGAGTGTCC 59 NA Mus musculus 50 Insc ENSMUSG00000048782 ENSMUST00000106620,ENSMUST00000060351 2 2 2 81 7 121972711 121978276 CCCTTATCAAACTGTGCCA 59 121978320 121978339 AAGAAGGTGATATTGGCGAG 59 NA Mus musculus 50 Rnf24 ENSMUSG00000048911 ENSMUST00000110194,ENSMUST00000059372 1 2 2 80 2 131130035 131130054 GTCTAGAAGACTTCAAGCCT 58 131129303 131129993 ACTTAACAAGGCACTTTCTG 58 NA Mus musculus 50 4930401F20Rik ENSMUSG00000049952 ENSMUST00000068750 2 1 2 108 7 4709400 4709418 GACAGAGATGCAGAAGAGG 59 4709308 4709328 ATCTTCATCTTGAAGGGCG 59 NA Mus musculus 50 Pard3b ENSMUSG00000052062 ENSMUST00000075374,ENSMUST00000094906,ENSMUST00000046673 1 3 5 83 1 61814550 61814571 ACTTAGAATACACAGATGGAGG 59 61814612 62056890 CAGCAATCAGCTTATCTTTGTC 59 NA Mus musculus 50 Il1rapl1 ENSMUSG00000052372 ENSMUST00000113966,ENSMUST00000078875 2 2 4 87 X 83993739 83993757 AAATCCTCCCTGATATGCT 57 83993290 83993689 TCAATGTATGTTCCAGTTGG 57 NA Mus musculus 50 Prmt1 ENSMUSG00000052429 ENSMUST00000107842,ENSMUST00000107841 2 2 4 126 7 52238948 52241661 ATCATGGAGGTTTCCTGTG 59 52237248 52238858 CATCCTTCAGCATCTCCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Mdm4 ENSMUSG00000054387 ENSMUST00000067398 3 1 3 88 1 134909286 134915367 AACAAATTAGTCAGCAGGTG 58 134909217 134909236 TTTCATGGTGAATACTTCCC 57 NA Mus musculus 50 OTTMUSG00000019350 ENSMUSG00000055109 ENSMUST00000112542,ENSMUST00000068500 1 2 2 161 X 152735575 152735593 CTGAGTTTCCTGGTAGCAG 59 152737829 152777616 ACACAAAGAAACCTCAGGG 59 NA Nonspecific Mus musculus 50 Ntrk2 ENSMUSG00000055254 ENSMUST00000078541,ENSMUST00000109840,ENSMUST00000109839 2 3 5 107 13 58962853 58962872 GAGTATGGGAAGGATGAGAG 58 58973122 58975696 GGTCCAGTCTTCATAGAGG 58 NA Mus musculus 50 Chd6 ENSMUSG00000057133 ENSMUST00000039782,ENSMUST00000039749 3 2 3 81 2 160838809 160838827 ACAAAGTGCTCATCTTCTC 57 160834275 160838765 TCATAGGTGTATCTCCTCTG 57 NA Mus musculus 50 Ceacam13 ENSMUSG00000057195 ENSMUST00000108488,ENSMUST00000108489 2 2 3 81 7 18598742 18604435 ACCTCCAAGTAAATACACCT 57 18604479 18604497 CTTTGATTCTTCAAGGGCC 58 NA InUTR Mus musculus 50 Armc7 ENSMUSG00000057219 ENSMUST00000035240 3 1 1 169 11 115337555 115337574 GAAACCCTAATCAAGTTTGC 57 115350153 115350171 GAGCTCAGGTACATGAGAG 58 NA DesignNoJunction Mus musculus 50 Sh3rf2 ENSMUSG00000057719 ENSMUST00000072008 1 1 2 80 18 42261390 42261410 CTCTACAACTTTGACCTTCGA 59 42261450 42263730 TGTGATGACATCATCCTTGAG 59 NA Mus musculus 50 Lepr ENSMUSG00000057722 ENSMUST00000102777,ENSMUST00000037552,ENSMUST00000106921,ENSMUST00000084387 2 4 4 81 4 101443983 101444001 TCTTTCCGGAGAATAACCT 57 101444045 101445454 AATACCTCATGTGTCTTCCA 58 NA Mus musculus 50 Unc13d ENSMUSG00000057948 ENSMUST00000106450,ENSMUST00000106451,ENSMUST00000075036 3 3 4 81 11 115931066 115931085 TAAATCTGGTACAGGACGTC 58 115930920 115931022 ATCTTGAGGACATTGTGGA 58 NA Mus musculus 50 Rpl30 ENSMUSG00000058600 ENSMUST00000079735,ENSMUST00000009039 1 2 3 80 15 34371035 34371054 TAATATTGAACTGGGCACAG 57 34370347 34370992 ATATCAGAATCACCTGGGT 57 NA Nonspecific Mus musculus 50 Lin9 ENSMUSG00000058729 ENSMUST00000085803 3 1 2 149 1 182618262 182618405 CAAATTAAGTGTCTGGCAGAG 59 182619423 182619441 CTGGATATGTGCAACATGG 58 NA Mus musculus 50 EG624681 ENSMUSG00000058762 ENSMUST00000114163,ENSMUST00000075483 2 2 2 112 17 34651004 34651022 TTCAGAAGGGAACGTTCTG 59 34650703 34650930 ATGAGTGCATCAATAGTCCTC 59 NA Mus musculus 50 Zfp422 ENSMUSG00000059878 ENSMUST00000057540,ENSMUST00000112880,ENSMUST00000079749 2 3 3 63 6 116576622 116576640 TACTGCTGTGATGAGTGTG 59 116576577 116576595 TTCTCTGGTGCTGAATGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr151 ENSMUSG00000061165 ENSMUST00000072430 1 1 1 60 9 37537944 37537963 GCTGGATTTGACATTATCGT 58 37537903 37537921 ACAGGATGAATGCATAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 1810073N04Rik ENSMUSG00000061306 ENSMUST00000103018,ENSMUST00000045402,ENSMUST00000076697,ENSMUST00000053692 2 4 4 83 11 119990567 119990585 ACTCCGGTTTAAAGTCCTC 58 119989831 119990520 AGGATGGTTTCCACATTGG 59 NA Mus musculus 50 Flot2 ENSMUSG00000061981 ENSMUST00000073660 3 1 4 91 11 77866878 77866896 GTTATGACCATCCTGTGTC 57 77866951 77869272 GTCATGATCTTCACCTGTG 57 NA Mus musculus 50 A130090K04Rik ENSMUSG00000064065 ENSMUST00000105617,ENSMUST00000105618,ENSMUST00000078070 2 3 5 104 10 3426732 3426751 ACTTGTTGTCTAGTGATGAC 57 3426817 3445786 TTATTTCTTCTCTGTCTGCC 57 NA Mus musculus 50 Cntn4 ENSMUSG00000064293 ENSMUST00000089208,ENSMUST00000113264,ENSMUST00000113261,ENSMUST00000113260,ENSMUST00000079416 2 5 6 80 6 106568390 106605501 TGTGATTGTGAAAGACCCA 59 106605544 106605563 GGAAGAACAATGCTTTCTCC 59 NA Mus musculus 50 Cntn4 ENSMUSG00000064293 ENSMUST00000089208,ENSMUST00000113264 1 2 6 139 6 106624634 106625734 GTTATAACCTGGGAGACAGTC 59 106625835 106625853 CTGAACACGTATCTGGAGG 59 NA Mus musculus 50 Lyar ENSMUSG00000067367 ENSMUST00000087514,ENSMUST00000114106 1 2 2 172 5 38617187 38617205 AAGGCTATGAAGCCAAGAC 59 38619191 38619297 CATCCAGTTCTGAAACTTCG 58 NA Mus musculus 50 Gpr113 ENSMUSG00000067642 ENSMUST00000088117,ENSMUST00000114774 2 2 2 81 5 30529543 30529561 AGATTCCTGTATGTGTCGC 59 30528981 30529499 TATCAGGTTTGCAGGAACAG 59 NA Mus musculus 50 Cd59b ENSMUSG00000068686 ENSMUST00000090429 3 1 4 105 2 103911235 103919022 CCTTGGATCAGATTTGGTG 58 103919091 103921169 CATTTGAGGCTAACAGCTG 58 NA InUTR Mus musculus 50 C330046G03Rik ENSMUSG00000069581 ENSMUST00000105402,ENSMUST00000092368,ENSMUST00000092366 3 3 3 142 10 77329107 77330428 CTATTCACAGGTGTGATAAGG 57 77330532 77330550 TTATCATCAGGCTTCCCTG 58 NA Mus musculus 50 Es31 ENSMUSG00000069922 ENSMUST00000093223 3 1 2 81 8 107577336 107579485 CCTTATCACGAAGTTCTGGA 59 107579529 107579547 TAAGGGCCTTGAATTCTCC 58 NA Mus musculus 50 Rabepk ENSMUSG00000070953 ENSMUST00000113086,ENSMUST00000113088 3 2 3 102 2 34641242 34650703 CCATGGACTTGGAAGACAG 59 34641158 34641176 AGTTGGTTTCCGATAGCTG 59 NA Mus musculus 50 Ott ENSMUSG00000072925 ENSMUST00000112761,ENSMUST00000101184,ENSMUST00000112763,ENSMUST00000112765,ENSMUST00000112769 3 5 5 80 X 145555165 145564372 AAATTGACAGATCGTCTGCA 59 145564412 145564433 GTTCAACTGTCTCATTTCTTCG 59 NA Nonspecific Mus musculus 50 Rmcs2 ENSMUSG00000073421 ENSMUST00000040828,ENSMUST00000114196 3 2 2 280 17 34401779 34401797 ATACATCTACAACCGGGAG 58 34404343 34404361 AATCTGTCACTGAGCAGAC 59 NA DesignNoJunction Mus musculus 50 ENSMUSG00000074919 ENSMUSG00000074919 ENSMUST00000099552 2 1 1 137 10 76479471 76479489 AGGAGCTGTCGAATAATGG 59 76483999 76484018 CCTTAGACAGAAGGAACCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Gal3st4 ENSMUSG00000075593 ENSMUST00000110922,ENSMUST00000100530,ENSMUST00000110921 3 3 3 94 5 138707524 138712004 CTCAAAGAGGTACTTCAGGT 58 138707449 138707467 TAATAGGAGAAGGCAGAGC 58 NA Mus musculus 50 NM_001101804.1 ENSMUSG00000078863 ENSMUST00000108939,ENSMUST00000108940 1 2 3 80 2 177569271 177569290 ATCCTTCTCAGAAGAGTCTC 57 177569002 177569231 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 Apoo ENSMUSG00000079508 ENSMUST00000113898,ENSMUST00000113897,ENSMUST00000113896,ENSMUST00000113895 1 4 4 119 X 91612840 91625283 GGTAATTCAGAGATCTGTGG 57 91625365 91627460 TAGAGTGAAAGCTCATCGA 57 NA Nonspecific Mus musculus 50 mmu-mir-297a-5 ENSMUSG00000076983 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Klf6 ENSMUSG00000000078 ENSMUST00000000080 1 1 1 91 13 5865999 5866486 ACTGTGACAGGTGTTTCTC 59 5866541 5866559 TTAGCCTACAGGATTCGTC 58 NA InUTR Mus musculus 50 Krit1 ENSMUSG00000000600 ENSMUST00000080085,ENSMUST00000115493 2 2 2 80 5 3807451 3809647 GATTAAAGGGAAACGAGTGG 58 3809690 3809708 ATAAACAGTGCTGCTTCTC 57 NA Mus musculus 50 0610031J06Rik ENSMUSG00000001418 ENSMUST00000001454 2 1 1 114 3 88130453 88130471 TTTGGTCTAGAGGTAGCCA 59 88130549 88131794 ATAACAGCTGGTTCAGCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Tat ENSMUSG00000001670 ENSMUST00000001720 3 1 1 90 8 112516537 112517727 CTCTGGAAGCTAAGGATGTC 59 112517780 112517798 ATGTTCTGTCCAGGATTGG 59 NA Mus musculus 50 Ndufb2 ENSMUSG00000002416 ENSMUST00000002490 3 1 1 75 6 39548302 39548320 ATGAAGAACTGGGAATCCC 58 39548359 39549407 AATGTCTCACCTTGCTCTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Tiam1 ENSMUSG00000002489 ENSMUST00000114124,ENSMUST00000114122,ENSMUST00000002588 2 3 4 80 16 89812179 89812197 ACTTAAACTGCCTCATGGA 58 89811828 89812136 AAAGTACATCAAGCTCATCC 57 NA Mus musculus 50 Etv3 ENSMUSG00000003382 ENSMUST00000061033 2 1 1 95 3 87331944 87331962 AAGGATCCAGATGAAGTGG 58 87332020 87333155 GTAATAGTATCTGAGGGCCC 58 NA Mus musculus 50 Dgcr6 ENSMUSG00000003531 ENSMUST00000076757,ENSMUST00000066027 3 2 2 65 16 18066902 18066920 AGAAGAGCCTCTACAACCA 59 18066949 18069534 TTAGAGTCTGTCTGAGCAC 58 NA DesignNoJunction Mus musculus 50 Clec11a ENSMUSG00000004473 ENSMUST00000004587 2 1 1 67 7 51561689 51561707 TTCTTCTAGTCCCAACCCT 59 51561388 51561659 CCAAGATGTAAGTGACAGTG 58 NA DesignNoJunction Mus musculus 50 Ddx39 ENSMUSG00000005481 ENSMUST00000019576,ENSMUST00000116451,ENSMUST00000109810 3 3 3 80 8 86246863 86246881 TAATGATGTTCAGGACCGG 59 86246924 86247033 CTCTGCTCAATGTATGTGGA 59 NA Mus musculus 50 Snx6 ENSMUSG00000005656 ENSMUST00000005798 1 1 1 80 12 55864701 55866578 GAGTAAAGGATGTAGACGAC 57 55864640 55864658 CAGATGCATCCTTAACTCG 57 NA Mus musculus 50 Ranbp1 ENSMUSG00000005732 ENSMUST00000052325,ENSMUST00000115645 2 2 2 88 16 18245441 18247389 TTTAAGATGCGTGCAAAGC 59 18245371 18245389 AGAAGCTTGACATCTCCAG 58 NA Mus musculus 50 Atp6v1b2 ENSMUSG00000006273 ENSMUST00000006435 3 1 1 80 8 71625354 71625845 GTGGTTCAGGTATTTGAAGG 58 71625887 71625906 TGTTCGGAGAATATCTCCAG 58 NA Mus musculus 50 Hfe ENSMUSG00000006611 ENSMUST00000095678 1 1 4 112 13 23798002 23799911 ATAACCACAGTAAGGTGCC 59 23797908 23797927 CCTCATAGTGATGTTCTGGG 59 NA Mus musculus 50 Tcap ENSMUSG00000007877 ENSMUST00000008021 3 1 1 65 11 98245185 98245203 CAAGTGTCTGAGGAGAACC 59 98245232 98245250 CAGAGTCAGGTCTTTCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Arpc5 ENSMUSG00000008475 ENSMUST00000077755 3 1 2 174 1 154618609 154618627 ATAAAGGCTTTGAGAGCCC 59 154621484 154621502 TTTATACCAGCAACTCCCA 58 NA DesignNoJunction, InUTR Mus musculus 50 Zmat5 ENSMUSG00000009076 ENSMUST00000009220 2 1 1 69 11 4628632 4628650 AGGAAATTCCTGCTGACAG 59 4630222 4630240 CTTGTTCTGACATGTGGGA 59 NA DesignNoJunction Mus musculus 50 Derl3 ENSMUSG00000009092 ENSMUST00000009236 2 1 1 80 10 75356792 75357182 GTGTTCTTATGACTCTGCTG 58 75357225 75357243 ATACATAGACCAGCATGGC 59 NA Mus musculus 50 Srp14 ENSMUSG00000009549 ENSMUST00000009693 2 1 2 141 2 118304759 118305121 CAAGAAATATGACGGTCGC 58 118302575 118302593 GTTCACTTCTTTGGAGCTC 58 NA Mus musculus 50 Fpgs ENSMUSG00000009566 ENSMUST00000113253,ENSMUST00000028148 3 2 2 102 2 32547980 32547999 TTATTCATGTCACTGGGACC 59 32543546 32546719 TGAGGAGAGCTAAAGAAGC 58 NA Mus musculus 50 Vps4b ENSMUSG00000009907 ENSMUST00000112736,ENSMUST00000094646 1 2 2 100 1 108679316 108679334 GAAGTGGAGTGATGTTGCT 59 108677229 108679252 TCCGCTTTCCTGTAAACAG 59 NA Mus musculus 50 Atad1 ENSMUSG00000013662 ENSMUST00000070210 3 1 1 81 19 32770331 32770349 CTACAGCGATGATGAAAGC 58 32761799 32770287 CCCATTACTATAACCTGGCA 58 NA Mus musculus 50 Ndufa2 ENSMUSG00000014294 ENSMUST00000014438 2 1 1 148 18 36903929 36904079 TGTGAGGGATTTCATCGTG 59 36902277 36902295 GATTGTTCAGAGACACCGT 59 NA DesignNoJunction Mus musculus 50 Msh3 ENSMUSG00000014850 ENSMUST00000022220,ENSMUST00000109520 2 2 3 101 13 92993134 92993152 GGTTATCCTGGATGAGCTG 59 92991027 92993071 GTTAAGGATTTCACGTCTCTG 58 NA Mus musculus 50 Endog ENSMUSG00000015337 ENSMUST00000015481 3 1 1 64 2 30028434 30028452 AATGTCTATGTCTGCACGG 59 30029219 30029237 ACATAGGACTTCCCATCAG 58 NA DesignNoJunction Mus musculus 50 Qdpr ENSMUSG00000015806 ENSMUST00000015950 2 1 1 72 5 45829122 45829140 AGGAAATCAATGCCTGAGG 59 45825904 45829086 AGTCATGGAAGGTTTCCAC 59 NA DesignRelaxed Mus musculus 50 Nkap ENSMUSG00000016409 ENSMUST00000016553 3 1 1 82 X 34681730 34681837 AAGGATCGATCAAAGGCAG 59 34681883 34681901 GGCTTATCATCTTGGGAGG 59 NA Mus musculus 50 Bik ENSMUSG00000016758 ENSMUST00000016902 1 1 1 116 15 83373584 83374019 CTATACACAGACTCGCTGTC 59 83374098 83374116 GAGTCAAGACTCTCCAGGA 59 NA Mus musculus 50 Zc3h18 ENSMUSG00000017478 ENSMUST00000017622,ENSMUST00000093073 1 2 3 118 8 124923052 124925498 AGAGACACAACACTTGAGC 59 124925580 124925598 TGATACGGTTCTGCTTCTG 59 NA Mus musculus 50 Rab11fip4 ENSMUSG00000017639 ENSMUST00000017783,ENSMUST00000092864 3 2 2 81 11 79505329 79505347 GAAGAACCTCTTTGCAACC 58 79505392 79506233 CTCCATTAGCTCATCTCGA 58 NA Mus musculus 50 1700001P01Rik ENSMUSG00000018543 ENSMUST00000018687 2 1 2 107 11 97632976 97632995 ATCACTACGGGCTTAAATGG 59 97632887 97632908 GTCTTCAGAAATGGGAAATGG 59 NA Mus musculus 50 Rai12 ENSMUSG00000018565 ENSMUST00000108595,ENSMUST00000108594,ENSMUST00000018709 3 3 3 81 11 69788587 69788605 CACATTCCCTGTGTTACAC 58 69784227 69788544 CTACTAGGGAGTTATCACCTG 58 NA Mus musculus 50 Ikzf1 ENSMUSG00000018654 ENSMUST00000109674,ENSMUST00000018798,ENSMUST00000048122 3 3 9 179 11 11600254 11607798 AGTTTCAGGAAAGGAGAGC 59 11654043 11654061 CCTTTCTGGGTAAAGGAGG 59 NA Mus musculus 50 Smyd4 ENSMUSG00000018809 ENSMUST00000044530 2 1 1 81 11 75195828 75195848 TACAGAGAAGAAGGAAACAGG 59 75195890 75200925 AATGAGACACTCCCTTAGAG 58 NA Mus musculus 50 Fndc8 ENSMUSG00000018844 ENSMUST00000018988 2 1 1 85 11 82712257 82712275 GTCAAACACGAGTTACTGC 59 82712324 82713031 CGGTTGCAAACTTATAGGG 58 NA Mus musculus 50 Smpd2 ENSMUSG00000019822 ENSMUST00000019965 2 1 1 92 10 41207620 41207806 TTTACAAGGCAGTCTCTGAG 59 41207547 41207565 GATCAGAGAAGGGCTTGTC 59 NA Mus musculus 50 Lama4 ENSMUSG00000019846 ENSMUST00000019992 2 1 1 80 10 38808247 38808575 TACTTTACCAGGTTGGATAGAG 58 38808615 38808634 CTCATAGAGTGAAGTGTGGA 58 NA Mus musculus 50 Nts ENSMUSG00000019890 ENSMUST00000020040 3 1 1 84 10 101947560 101947578 TTTAGCTTGGAAGCAATGC 59 101945108 101947512 CCTGGATTATCTCCCAGTG 58 NA Mus musculus 50 Fgd6 ENSMUSG00000020021 ENSMUST00000020208 1 1 1 80 10 93587638 93587656 TTTCTTAAAGAAGGCACCC 57 93587700 93588308 AAGAGCATCGTTAAACAGG 57 NA Mus musculus 50 Ndufa12 ENSMUSG00000020022 ENSMUST00000020209 1 1 1 242 10 93661781 93661799 CAGATGAGAATGGAGCTGG 59 93666079 93666097 ATCCACATCCCAGAATGTG 59 NA DesignNoJunction Mus musculus 50 Rufy2 ENSMUSG00000020070 ENSMUST00000092458,ENSMUST00000062600,ENSMUST00000020264 3 3 3 94 10 62453821 62455877 GCTCCTAAGTGAGTTCTATGAG 59 62455932 62455950 CATCAATCACGTTCAAGCC 59 NA Mus musculus 50 1700021K02Rik ENSMUSG00000020096 ENSMUST00000105457,ENSMUST00000035894,ENSMUST00000079235,ENSMUST00000092492 2 4 6 115 10 60638621 60638639 CAAACATCACAACCAACAC 57 60638715 60642002 CTTCCTGTAACTTGGATATGAG 57 NA Mus musculus 50 Srgap1 ENSMUSG00000020121 ENSMUST00000081688,ENSMUST00000020322 1 2 2 80 10 121363028 121368384 CCATCAACAGTTCAAGAAAGAC 59 121362969 121362988 TCTCTTCTCACTTGGTTCAG 58 NA Mus musculus 50 E2f7 ENSMUSG00000020185 ENSMUST00000073781 1 1 1 81 10 110204235 110204253 GTTCACGTAACAGAAGAGC 58 110204297 110211706 GTTCTTCATCAATGGAGCTG 58 NA Nonspecific Mus musculus 50 Hcfc2 ENSMUSG00000020246 ENSMUST00000020478 2 1 1 81 10 82163742 82163763 GGACTAGAATCCTAGTGTTTGG 59 82163804 82165198 CAACGACTTGCTTGTAACTC 59 NA Mus musculus 50 Zfp354a ENSMUSG00000020364 ENSMUST00000020628,ENSMUST00000102766,ENSMUST00000109122,ENSMUST00000109119,ENSMUST00000109121 2 5 5 138 11 50874368 50874386 TTGACATTTGAAGACGTGG 58 50874488 50874922 GTTTGGTAAACGGGAATCC 58 NA DesignNoJunction Mus musculus 50 9530066K23Rik ENSMUSG00000020411 ENSMUST00000020679 3 1 1 100 11 45964268 45964772 AAAGACACAGGGTTCATCG 59 45964186 45964205 ATGAGGATATTCCTTTGCCC 59 NA Mus musculus 50 Prpsap2 ENSMUSG00000020528 ENSMUST00000004955 2 1 1 203 11 61554475 61554493 ATAGGAATGCAGTCATCGT 58 61548572 61550427 GAATCAGCATCGGGATCTC 59 NA DesignRelaxed Mus musculus 50 Laptm4a ENSMUSG00000020585 ENSMUST00000020909 1 1 1 83 12 8938546 8941511 GAATGGCTGATAATGCCTG 58 8941558 8941576 AAATGGCTCCATAAACCAG 57 NA Mus musculus 50 Slc9a3r1 ENSMUSG00000020733 ENSMUST00000021077 1 1 1 109 11 115037817 115038546 AATTGTGGAGGTCAATGGT 59 115038619 115038637 TTTCCTTGTCTACCACCAG 58 NA Mus musculus 50 Pafah1b1 ENSMUSG00000020745 ENSMUST00000102520,ENSMUST00000021091 3 2 2 106 11 74493037 74493055 GTTGTGCTGATGACAAGAC 59 74491234 74492969 CTTATGGAAATCCAAGGAGGT 59 NA Mus musculus 50 2310004N24Rik ENSMUSG00000020778 ENSMUST00000021130 2 1 1 80 11 116066227 116066245 ATTACTTTCCCTGGGAGGT 59 116066288 116066938 CATAGAGATACAACCTGCCA 58 NA Mus musculus 50 Ankfy1 ENSMUSG00000020790 ENSMUST00000102548 3 1 1 80 11 72527972 72536134 GATAGACTTGTCAGATGCG 57 72536176 72536196 TCTCTGAACTCTAACTCATCC 58 NA Mus musculus 50 Fdft1 ENSMUSG00000021273 ENSMUST00000054963 1 1 1 126 14 63770077 63770097 CAGGTATTCAAAGGAGTAGTG 57 63765790 63769989 GGATCCGGTGATAAATCTC 57 NA Mus musculus 50 Aoah ENSMUSG00000021322 ENSMUST00000086503 2 1 2 103 13 20942960 20942978 TATGAAGGCTGATGTGGTG 59 20943045 20943524 AGATGAGTTGGTTGTCCTG 59 NA Mus musculus 50 Tbc1d7 ENSMUSG00000021368 ENSMUST00000021797 2 1 1 80 13 43260824 43264150 GCTTCTAGGCATCTTACCTC 59 43260763 43260781 AGGATGTCATGGTACTGGT 59 NA Mus musculus 50 Vdac2 ENSMUSG00000021771 ENSMUST00000022293 3 1 1 178 14 22652164 22653030 CAAAGGATTTGGCTTTGGG 59 22657065 22657083 TATCGGTGTTCCACTTCTC 58 NA Mus musculus 50 Nid2 ENSMUSG00000021806 ENSMUST00000022340 2 1 1 80 14 20608971 20608990 GAACAGGTGTAGACTACACC 59 20609033 20609514 CACACTCATTGACATCCAC 58 NA Mus musculus 50 Lats2 ENSMUSG00000021959 ENSMUST00000077981 1 1 3 116 14 58352802 58352820 AATCCGATATTCCCTCCTG 58 58341378 58352722 GGAATATGCATCTGGTCAC 57 NA Mus musculus 50 6030458C11Rik ENSMUSG00000022195 ENSMUST00000057256,ENSMUST00000022804 2 2 2 86 15 12745721 12746087 TAACCTTCCTGAGGATGGT 59 12745653 12745671 CACAAGTCAGCAAAGACTG 58 NA Mus musculus 50 Q8VHV1-3 ENSMUSG00000022296 ENSMUST00000022905 2 1 1 196 15 38764857 38765463 CTACAAATCAGGTGTGCTG 58 38780664 38780682 GCTTAGCATCCCTCTTAGC 59 NA DesignNoJunction Mus musculus 50 Cacna1i ENSMUSG00000022416 ENSMUST00000075442 2 1 1 80 15 80186637 80189220 ATCCTGCTCATCATAGTGG 58 80189264 80189282 CTTGGTCTCAGAGAACTGG 59 NA Mus musculus 50 Xrcc6 ENSMUSG00000022471 ENSMUST00000069530 1 1 1 80 15 81849516 81852885 GCATCCAGTGTATCCAGAG 59 81852929 81852947 TTCCATAGAACACCACTGC 59 NA Mus musculus 50 Ercc4 ENSMUSG00000022545 ENSMUST00000023206 2 1 1 83 16 13125511 13126492 TGGTCAGAATTCAGGTTGG 59 13126539 13126557 TCTGGAACTCGGTAAACTC 58 NA Mus musculus 50 Gpihbp1 ENSMUSG00000022579 ENSMUST00000023243 2 1 1 84 15 75427511 75427530 TACAACTACGATGATGACGA 58 75427577 75427954 ATTGTAGAGGTGCTCTGTC 58 NA Mus musculus 50 Prkdc ENSMUSG00000022672 ENSMUST00000023352 2 1 1 80 16 15713810 15713829 GAAAGCTCTTAGGAAGTCCC 59 15713870 15714249 TCTTCAACACTCTGTACTGTC 59 NA Mus musculus 50 Cdgap ENSMUSG00000022799 ENSMUST00000023487 1 1 1 80 16 38625742 38637025 CTATGAGAAATTCACGGAAGC 59 38625682 38625701 AGCTCCAGGATAACATTCTG 59 NA Mus musculus 50 Cd86 ENSMUSG00000022901 ENSMUST00000089620,ENSMUST00000023618 2 2 2 82 16 36621115 36629063 GATCTCAGATGCTGTTTCC 57 36621051 36621070 TTTGAGCCTTTGTAAATGGG 58 NA Mus musculus 50 Enpp5 ENSMUSG00000023960 ENSMUST00000024756 2 1 2 90 17 44219795 44219813 ACAGAGTTCAACCAATCGT 59 44219866 44222169 TAACCATGGTTGCCTAACAG 59 NA Mus musculus 50 Wiz ENSMUSG00000024050 ENSMUST00000064694,ENSMUST00000114463,ENSMUST00000114462,ENSMUST00000087703,ENSMUST00000003725 1 5 6 138 17 32493472 32493490 ACAGAAGCTGGAAGAAGTG 59 32492113 32493370 TTCCACTTCACAGAACCTG 59 NA Nonspecific Mus musculus 50 Mapk8ip3 ENSMUSG00000024163 ENSMUST00000115229,ENSMUST00000088345,ENSMUST00000115228 1 3 3 80 17 25041757 25041863 CATCTGGCAGTTCTTTAGTC 58 25041696 25041714 ATGTTCACAGATGGGTAGG 58 NA Mus musculus 50 Apom ENSMUSG00000024391 ENSMUST00000025249 1 1 1 81 17 35267115 35267362 CTCCTCTACAATCGGTCAC 59 35267052 35267071 CTTTGAAGTCCAAGCAAGAG 59 NA Mus musculus 50 4833403I15Rik ENSMUSG00000024481 ENSMUST00000025358 3 1 1 95 18 47033484 47033502 TTTGCTGCAAACATCACAG 59 47033560 47036553 AGGCAAGGCAACTATATCTG 59 NA Mus musculus 50 Zfpl1 ENSMUSG00000024792 ENSMUST00000025707 3 1 1 99 19 6084012 6084033 CTACAAGATAGTGACTACAACC 57 6082764 6083954 CCCAATGAAAGAGATCATAGC 58 NA Mus musculus 50 Cyp2c55 ENSMUSG00000025002 ENSMUST00000025966 1 1 1 83 19 39108796 39108814 TAGCTGGAACAGAAACCAC 59 39108861 39109943 GGACTTTAGCTGTGACCTC 59 NA Mus musculus 50 Gli1 ENSMUSG00000025407 ENSMUST00000026474,ENSMUST00000105252 3 2 2 81 10 126775530 126775549 GTCAATAGCTATAGTGAGCC 57 126775212 126775486 CAGAAAGTCCTTCTGTTCC 57 NA Mus musculus 50 Stag2 ENSMUSG00000025862 ENSMUST00000115073,ENSMUST00000115072,ENSMUST00000069619 3 3 3 80 X 39607015 39610039 TAGTAATAGTGCAGATGGTCAG 59 39610078 39610098 GCTGCAAGTAAATTTCTCCTC 59 NA Mus musculus 50 Unc50 ENSMUSG00000026111 ENSMUST00000027285,ENSMUST00000114925 1 2 2 85 1 37489440 37489458 GAGACAATAAAGCTGCTGC 59 37489507 37494015 GAGACGAACCACATTAACG 58 NA Mus musculus 50 Capn10 ENSMUSG00000026270 ENSMUST00000027488 3 1 1 80 1 94843539 94843798 CAGAATCGATAGGCAGTCC 59 94844089 94844108 TTCATCACTGCCATAAAGGA 59 NA Mus musculus 50 Asb1 ENSMUSG00000026311 ENSMUST00000027538,ENSMUST00000086843 3 2 3 107 1 93443796 93448637 GGCTCTTATCAGGTATGGG 58 93448708 93448726 TATAGAGGACAGACCACCA 58 NA Mus musculus 50 Dclre1c ENSMUSG00000026648 ENSMUST00000115066,ENSMUST00000100463,ENSMUST00000115067,ENSMUST00000102988,ENSMUST00000100462,ENSMUST00000061852 1 6 7 145 2 3355357 3358040 GAGTTCAGGTTCATGTGGA 59 3360941 3360961 ACAGGGTAGTTTATTCCACTG 59 NA Mus musculus 50 3110001A13Rik ENSMUSG00000026655 ENSMUST00000115055,ENSMUST00000115054,ENSMUST00000115053,ENSMUST00000027965,ENSMUST00000115052 3 5 5 90 2 3695765 3695783 GAAGGAGGAAGAAGCTCAG 59 3695837 3696787 CTTCTCAAGTTCAAGCTGC 59 NA Mus musculus 50 Acvr1c ENSMUSG00000026834 ENSMUST00000028178,ENSMUST00000112608,ENSMUST00000112607,ENSMUST00000100085 2 4 4 82 2 58132770 58134015 AGTTGGAGGAGTTGTTGAG 59 58132706 58132727 CCTTCCTCATTTCTTCTATCGA 59 NA Mus musculus 50 Hmgcs2 ENSMUSG00000027875 ENSMUST00000090746 3 1 1 65 3 98106662 98107097 ACCACAAGGTGAACTTCTC 59 98107126 98107144 CAAGGTACCAAGTACCTGG 59 NA DesignRelaxed Mus musculus 50 Npr1 ENSMUSG00000027931 ENSMUST00000029540 2 1 1 80 3 90262647 90262975 CTTAAACATATGCGGGATGTG 59 90262587 90262605 GATACAGATGTTGGGAGGG 59 NA Mus musculus 50 Neurog2 ENSMUSG00000027967 ENSMUST00000029587 3 1 1 120 3 127337321 127337339 ATACAGCTGCACTTTATCG 57 127337423 127337441 GCTCTAGATACAGTCCCTG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Larp7 ENSMUSG00000027968 ENSMUST00000029588 1 1 1 83 3 127249450 127249468 AAGAAGCACCTAGAAAGCC 59 127249313 127249404 TCTTCTCTTCTGCTACTCGT 59 NA Mus musculus 50 Pitx2 ENSMUSG00000028023 ENSMUST00000029657,ENSMUST00000106382,ENSMUST00000042587 1 3 3 136 3 128918642 128918660 TCATTTCACTAGCCAGCAG 59 128918760 128921267 GATTCTTGAACCAAACCCG 59 NA Mus musculus 50 Ifi44 ENSMUSG00000028037 ENSMUST00000029671 1 1 1 80 3 151402446 151408464 CAGATACCAGTTCGATTCCA 59 151402385 151402403 ATTCTGTCCTTCAGCAGTG 59 NA Mus musculus 50 4921539E11Rik ENSMUSG00000028520 ENSMUST00000030245,ENSMUST00000097944 1 2 2 96 4 102915435 102915453 AAATCAGCGGAGTCTTCAG 59 102909597 102915378 CATGTTGATCTGTAAATGGAGG 59 NA Mus musculus 50 2310026E23Rik ENSMUSG00000028545 ENSMUST00000030274,ENSMUST00000106583 3 2 2 61 4 111103742 111105779 TTAGACACATCAAGAGACCG 59 111105803 111105821 CTCGATACTCTTGTGAGCC 59 NA DesignRelaxed Mus musculus 50 0610037L13Rik ENSMUSG00000028608 ENSMUST00000106727,ENSMUST00000106726,ENSMUST00000030347,ENSMUST00000106725 1 4 5 130 4 107562798 107564080 GTACCTGAAGATGAAATGTGG 58 107564605 107564623 CACATAGCTTGCACTTCTG 58 NA Mus musculus 50 Fusip1 ENSMUSG00000028676 ENSMUST00000105853 3 1 4 117 4 135419110 135419449 CCTAGAAACAGTAGACCGAC 59 135419681 135419699 ACCGTGATCTTGAATTGGA 58 NA DesignRelaxed Mus musculus 50 Ptch2 ENSMUSG00000028681 ENSMUST00000030443 1 1 1 80 4 116777640 116777659 GGGATTTGAACAAGATCTGC 59 116777702 116777854 ACAGCTTCTCAATCATCCG 59 NA Mus musculus 50 Nsun4 ENSMUSG00000028706 ENSMUST00000030475,ENSMUST00000106509,ENSMUST00000030474 3 3 3 92 4 115712738 115712757 GATATTAGGGAAGGGAACCA 58 115708473 115712686 TACTAACACCCTATCATAGGTG 58 NA Mus musculus 50 Pdzk1ip1 ENSMUSG00000028716 ENSMUST00000106548 2 1 2 84 4 114761810 114763758 TCAACAAGGTCTAGGAAACC 59 114763805 114763823 GAAGACGATTGCAACAAGG 59 NA Mus musculus 50 Fgr ENSMUSG00000028874 ENSMUST00000030693 3 1 1 81 4 132554339 132554358 CCTAATATGCAAGATCGCTG 58 132554402 132555833 GAACTTGGTTCCTTGTTGG 58 NA Mus musculus 50 Tmub1 ENSMUSG00000028958 ENSMUST00000030799,ENSMUST00000115033,ENSMUST00000115036 2 3 3 114 5 23952396 23952414 TCTCAATGACTCTGAGCAG 58 23952040 23952058 TTGACCTTGGTAGATGAGC 58 NA DesignNoJunction Mus musculus 50 Abcb8 ENSMUSG00000028973 ENSMUST00000115077,ENSMUST00000073076,ENSMUST00000035362 1 3 3 60 5 23912602 23913126 ATAGGTTTCATCAGCCAGG 59 23913148 23913168 ATCGGATATTCTCCATGATGG 59 NA DesignNoJunction Mus musculus 50 Gtf3c2 ENSMUSG00000029144 ENSMUST00000101411,ENSMUST00000088010 1 2 5 90 5 31476201 31476219 AGTCTCCACATCCAAAGAG 58 31475423 31476147 TATAGAAGTGCCACTTGGG 58 NA Mus musculus 50 Emilin1 ENSMUSG00000029163 ENSMUST00000031055 1 1 1 93 5 31222582 31222997 CAGAGACAGGTGTATTCAC 57 31223053 31223072 AATACTGCTTCCACTTTCTC 57 NA Mus musculus 50 D5Ertd579e ENSMUSG00000029190 ENSMUST00000066244 3 1 3 61 5 37064020 37064040 TATATCCTCAGTCTTCTGCTG 58 37063979 37063997 ATACCTACCTGTTCCTGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rfc1 ENSMUSG00000029191 ENSMUST00000031092 2 1 1 80 5 65665706 65666638 CGAGTTGAACAGATTAAGAGTG 59 65665647 65665665 TTCATTCATAGCTGGAGGG 58 NA Mus musculus 50 Iqcd ENSMUSG00000029601 ENSMUST00000069259,ENSMUST00000094391 1 2 2 115 5 121050749 121050767 TTCATACAGGACATCAGCC 59 121050846 121052351 AAGTTCTCCTTCTCCACCT 59 NA DesignNoJunction Mus musculus 50 Erp29 ENSMUSG00000029616 ENSMUST00000111802 3 1 1 82 5 121895571 121897157 GATCTCAGACTATGGCGAC 59 121895507 121895525 GGTAGAAGACTGGGTAGCT 59 NA Mus musculus 50 Gnb2 ENSMUSG00000029713 ENSMUST00000031726,ENSMUST00000111027 1 2 2 117 5 137970990 137971088 TACACCACTAACAAGGTCC 58 137970891 137970909 AGATGGAGCAGATGTTGTC 59 NA Nonspecific Mus musculus 50 Moxd2 ENSMUSG00000029885 ENSMUST00000031937 3 1 1 82 6 40834058 40834076 AATGCTATGGATCAGACCC 58 40833820 40834012 AAACTGGTAACTAAGGCCC 59 NA Mus musculus 50 Csda ENSMUSG00000030189 ENSMUST00000081659 2 1 4 180 6 131334581 131338050 AGAAGAAAGTTCTCGCCAC 59 131330916 131330936 AACTCTACAGTTTCTCCATCC 59 NA Mus musculus 50 Vasp ENSMUSG00000030403 ENSMUST00000032561 2 1 1 84 7 19850056 19850074 GTCCAGATCTACCACAACC 59 19849907 19850008 AGTTGATAACCACCTGCTG 59 NA Mus musculus 50 Mrps11 ENSMUSG00000030611 ENSMUST00000032840 2 1 1 61 7 85936787 85936806 ATCAGAGTCGTAGTGAAAGG 58 85937532 85937550 ATGGTCAGTCCTTTGATGG 59 NA DesignNoJunction Mus musculus 50 Pold3 ENSMUSG00000030726 ENSMUST00000107079,ENSMUST00000032969 1 2 2 83 7 107238253 107241889 AGATGAAGTCTTCGAAGACTC 59 107238190 107238208 ATAGGATCAGGAGGTGGAG 59 NA Mus musculus 50 Phca ENSMUSG00000030760 ENSMUST00000033020 3 1 1 80 7 105372517 105374917 TTCACTGAGGAACTTTCGA 58 105372455 105372474 GTTAGAATATGCCACCATGC 59 NA Mus musculus 50 Itgax ENSMUSG00000030789 ENSMUST00000033053 1 1 1 80 7 135285496 135285705 CTTCCCAGACTTGAAGACC 59 135285747 135285767 TCTTCTCCATCATTAGACACC 58 NA Mus musculus 50 A930008G19Rik ENSMUSG00000030956 ENSMUST00000097999,ENSMUST00000065371,ENSMUST00000106169,ENSMUST00000106168,ENSMUST00000106165,ENSMUST00000106166 2 6 8 174 7 139951850 139963279 CTTTCCTGTGGAATTATGGA 57 139951695 139951713 CTTTGATTAGGCTGGTCAC 58 NA DesignNoJunction Mus musculus 50 Figf ENSMUSG00000031380 ENSMUST00000033751 2 1 1 82 X 160833897 160833915 ACATGCTGTGGGATAACAC 59 160833960 160838608 GAGGTAAGAGTGGTCTTCTG 59 NA Mus musculus 50 Mt1 ENSMUSG00000031765 ENSMUST00000034215 1 1 2 257 8 96703172 96703190 CTCACTTACTCCGTAGCTC 58 96704108 96704126 TATTTACACGTGGTGGCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Ccdc135 ENSMUSG00000031786 ENSMUST00000058479 2 1 1 82 8 97595505 97595523 CACATCAACAAGACCACAG 58 97595569 97596657 GACTTGTATGAGTGCACAC 58 NA Mus musculus 50 Gtl3 ENSMUSG00000031796 ENSMUST00000034249 3 1 1 85 8 97946790 97948530 GGGACAAATGTCAGTACCA 59 97946723 97946741 ATCATGACAAGGAAAGGCA 59 NA Mus musculus 50 2310079N02Rik ENSMUSG00000031851 ENSMUST00000065135 3 1 2 162 8 128260076 128260094 TAGGATTCGATGTCGTCAC 58 128261310 128261965 GCTTCTTGATGGTTTCTTAGG 58 NA Mus musculus 50 Pbx4 ENSMUSG00000031860 ENSMUST00000081503 2 1 1 106 8 72388438 72388729 AAGTATGAACAGGCCTGTC 59 72388798 72388817 TTCACCATGTGTTCCATCTC 59 NA Mus musculus 50 Pts ENSMUSG00000032067 ENSMUST00000034570 2 1 1 80 9 50334995 50335013 AATGCAACAATCCGAATGG 59 50332866 50333369 TTCCTGTAACAGGATCAATCTC 59 NA Mus musculus 50 Smad3 ENSMUSG00000032402 ENSMUST00000113931,ENSMUST00000034973,ENSMUST00000113930 2 3 3 123 9 63503561 63511481 AATAACTTGGACCTACAGCC 59 63503457 63503475 CTACTGTCATGGATGGCTG 59 NA Mus musculus 50 Arpp21 ENSMUSG00000032503 ENSMUST00000111872,ENSMUST00000062476,ENSMUST00000035085,ENSMUST00000070218,ENSMUST00000084898,ENSMUST00000027590 1 6 6 98 9 112086079 112086781 AAATCCAAGTCAGGAGCAG 59 112085999 112086017 CTGATCCTGGTGACTTTCC 59 NA Mus musculus 50 Arhgef5 ENSMUSG00000033542 ENSMUST00000031750 1 1 1 80 6 43230953 43230972 ATACTGAAGAGAACTCAGCC 58 43231015 43231430 TCGAATCAGCTTCTCTAGG 58 NA Mus musculus 50 6330416L07Rik ENSMUSG00000033972 ENSMUST00000041281 1 1 3 118 17 22492078 22492096 GACATCCAGTTAGACCAGC 59 22478047 22480611 AATGTTAACTGACCCTGGG 59 NA Mus musculus 50 Tmem109 ENSMUSG00000034659 ENSMUST00000038128 3 1 1 136 19 10948734 10948753 GACCATGCATGTGATTTCAG 59 10946628 10947083 TGAGTTGTTCACCATCCAG 59 NA Mus musculus 50 4930579J09Rik ENSMUSG00000035179 ENSMUST00000038842 3 1 1 98 19 10551585 10551603 GGGTTCACTCTTAACAACC 57 10549579 10551523 ATTCTCGAAGTACCCTTGG 58 NA Mus musculus 50 B020004J07Rik ENSMUSG00000035201 ENSMUST00000106919,ENSMUST00000084386 2 2 2 85 4 101508535 101509437 TTGTTCAGATGCCTGAAGAG 59 101508469 101508488 TCTGACATGTGTCTCAAGTC 59 NA Mus musculus 50 Hoxc9 ENSMUSG00000036139 ENSMUST00000001706 2 1 1 128 15 102812588 102812606 AAGCACAAAGAGGAGAAGG 59 102814402 102814420 AAACTCCTTCTCCAGTTCC 58 NA DesignNoJunction Mus musculus 50 Ube2r2 ENSMUSG00000036241 ENSMUST00000040008 1 1 1 80 4 41121097 41121115 TTACCCATATTCACCACCT 57 41121158 41130294 ATGCATACATCTCCATTCTC 57 NA Mus musculus 50 Ube2r2 ENSMUSG00000036241 ENSMUST00000040008 2 1 1 81 4 41136249 41136268 GATGCTTCAGTCATGTTCAG 58 41136309 41137648 AGACCTGTTTCCTAATGATCTC 59 NA Mus musculus 50 Edc4 ENSMUSG00000036270 ENSMUST00000040254 3 1 1 80 8 108416266 108416286 GTTCTCCTTTCCCTAATCCAG 59 108416328 108416585 AGCTTCTTCCAAGTAGCTG 59 NA Mus musculus 50 Tacc3 ENSMUSG00000037313 ENSMUST00000079534,ENSMUST00000114426,ENSMUST00000114422,ENSMUST00000074849 3 4 4 82 5 34003963 34003983 GCAGATCATCTGTTCTTTGTC 59 34004027 34004181 CTGGAACGTCACATTTGTG 59 NA Mus musculus 50 2410018C17Rik ENSMUSG00000037339 ENSMUST00000045329,ENSMUST00000065119,ENSMUST00000065162 3 3 4 63 5 33957282 33957300 GAACCAGAGTTTGGATGAC 58 33953121 33957255 CTTCTCAGCAGAATACGGG 59 NA DesignRelaxed Mus musculus 50 Taf2 ENSMUSG00000037343 ENSMUST00000041733 2 1 1 80 15 54885871 54887357 CCATTGGATTAAAGAGGAGC 58 54885810 54885828 CCAAATATGGGATGAAGCA 57 NA Mus musculus 50 Hhat ENSMUSG00000037375 ENSMUST00000044190,ENSMUST00000097435,ENSMUST00000085565 1 3 4 90 1 194552538 194553487 GGAAGTTAAGAGAAGGTGGT 58 194552467 194552485 GAAGCTGGTGTAGTACAGG 59 NA Mus musculus 50 Ranbp10 ENSMUSG00000037415 ENSMUST00000041400 2 1 1 83 8 108298009 108298200 TATACACAACACAGGAGCA 58 108297944 108297963 GGGTATTTACTGTGGTTCTG 57 NA Mus musculus 50 Arid5a ENSMUSG00000037447 ENSMUST00000115032,ENSMUST00000115031,ENSMUST00000097779,ENSMUST00000097778,ENSMUST00000115030 2 5 8 73 1 36374467 36374485 AGATCTACAAGGCAGTGGA 59 36374943 36374961 ATACACGTTCTTCCAGAGG 58 NA DesignNoJunction Mus musculus 50 Rapgef6 ENSMUSG00000037533 ENSMUST00000101206,ENSMUST00000102743,ENSMUST00000050145,ENSMUST00000108894,ENSMUST00000094536,ENSMUST00000041060 2 6 7 121 11 54492823 54492841 TAAAGTCCACTTGCATCAG 57 54492925 54497408 GAGGTAAACTTGTACTCAGC 57 NA InUTR Mus musculus 50 Atoh8 ENSMUSG00000037621 ENSMUST00000042646 2 1 1 122 6 72157143 72173747 AAGAAACGGAAGGAGTGAC 59 72157039 72157057 GAAGACAAGGAATGAGGCT 59 NA InUTR Mus musculus 50 Rfxdc2 ENSMUSG00000037674 ENSMUST00000093820 1 1 1 88 9 72459561 72459580 ACTTCCTTGTAAAGAGTCAC 57 72459631 72462857 AATTCCTTTAAGTCCTGCC 57 NA Mus musculus 50 2810032G03Rik ENSMUSG00000037735 ENSMUST00000037953 1 1 1 88 12 5421828 5421846 TTGCAGAAGGAAGAGACAC 59 5421897 5421916 CATTTATGAGTTTGCACGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gdf5 ENSMUSG00000038259 ENSMUST00000040162,ENSMUST00000109628 2 2 2 65 2 155770238 155770256 GAAAGGGAGGTAACAGCAG 59 155770191 155770210 CAATAAAGCTGGTGATGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2810022L02Rik ENSMUSG00000038305 ENSMUST00000041978 2 1 1 80 1 57912357 57936361 ATCAAAGAGAAGATCTACGCAG 59 57936402 57936420 AAACTGTTGGAGTACCAGC 59 NA Mus musculus 50 Setd1b ENSMUSG00000038384 ENSMUST00000056053 2 1 1 81 5 123611861 123611879 AAGGACAAGCTGAGATACC 58 123611924 123613178 CTGGGATACTCATACCCTG 58 NA Mus musculus 50 Tbc1d17 ENSMUSG00000038520 ENSMUST00000047085 3 1 1 81 7 52097663 52098003 TGTGATTTCCTGGATTCTCAG 59 52097602 52097620 GGAATTCCCTCTTGAACCA 59 NA Mus musculus 50 C030046E11Rik ENSMUSG00000038658 ENSMUST00000043610 1 1 2 114 19 29607743 29607761 GTACCATGATAGCAGTGTC 57 29615822 29636489 ATTTGTGGACTTCCTTTGG 57 NA Mus musculus 50 Gcnt1 ENSMUSG00000038843 ENSMUST00000067276 3 1 1 161 19 17404965 17407607 TCTAAACGTGATATCTTGTCCC 59 17404825 17404844 TCCTCCGAAACAAGTTTCTC 59 NA InUTR Mus musculus 50 Ncoa7 ENSMUSG00000039697 ENSMUST00000105514,ENSMUST00000068567,ENSMUST00000092610,ENSMUST00000099982 1 4 4 89 10 30368338 30372754 CATGGATAACCAGATATTTGGG 58 30368270 30368288 GTGTAGAGAAACGTTTCGC 59 NA Mus musculus 50 Dock3 ENSMUSG00000039716 ENSMUST00000044532 2 1 1 80 9 106891790 106891809 AAATACTTCCACTTCCGACC 59 106888397 106891748 GATGAGCTCCTTATATGCCA 59 NA Mus musculus 50 4932438H23Rik ENSMUSG00000039851 ENSMUST00000035689,ENSMUST00000114076 1 2 2 60 16 91056313 91056332 GGAAATACCATTCGCAACTG 59 91056272 91056290 CCAAACTGTAGTCACAGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Disp2 ENSMUSG00000040035 ENSMUST00000063975,ENSMUST00000110846,ENSMUST00000110843,ENSMUST00000037547 3 4 4 83 2 118612455 118612614 ATGCCGAAGAGCTATTCTC 59 118612660 118612679 GGTACAGAGGAAGATGAAGG 59 NA Mus musculus 50 Gas8 ENSMUSG00000040220 ENSMUST00000093043 2 1 1 83 8 126048165 126048183 TCATAAAGAACCTGTGCCT 58 126049563 126050373 CCTCAATTTCTCGAACTTGC 59 NA Mus musculus 50 Dnm3 ENSMUSG00000040265 ENSMUST00000086074,ENSMUST00000070330 1 2 2 80 1 164285535 164285556 GCGTAACAGGAATGAATAAAGG 59 164283840 164285495 GCGTTAGATTTAACACGTGG 59 NA Mus musculus 50 Bach2 ENSMUSG00000040270 ENSMUST00000095131 2 1 4 80 4 32588777 32588795 GAATACTTCTGGCAAGCAC 58 32588838 32603790 CCTGTGGAGGTATATCTCCT 59 NA Mus musculus 50 Nlrp4a ENSMUSG00000040601 ENSMUST00000068767 1 1 1 80 7 27235826 27238382 AACACAGCTATATGGAAAGG 57 27238424 27238443 GTTCCTGAATGTCCTTACTG 57 NA Mus musculus 50 1700063H04Rik ENSMUSG00000040657 ENSMUST00000043553 1 1 1 60 6 122342231 122342251 CATTATGATCTGGGAGATTGG 57 122342270 122342291 TTTGTATGAGTGAGTTCTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ints8 ENSMUSG00000040738 ENSMUST00000044616,ENSMUST00000108319,ENSMUST00000108318 2 3 3 80 4 11143717 11145772 TCTTCCATACCTAACCTCCA 59 11143656 11143677 ACTGAGTGTATATCGAACTAGC 59 NA Mus musculus 50 4930505A04Rik ENSMUSG00000040919 ENSMUST00000041763 3 1 1 89 11 30326353 30327061 AAGGAAAGAAACATGGAACC 58 30326283 30326302 TGTTCAATAATACCTCCGGT 58 NA Mus musculus 50 Tcl1 ENSMUSG00000041359 ENSMUST00000041316 2 1 2 67 12 106456490 106456877 CATATCAAGTTTAGAGACGTGG 58 106456444 106456462 TATTCATCGTTGGACTCCG 59 NA DesignRelaxed Mus musculus 50 Rbm45 ENSMUSG00000042369 ENSMUST00000046389 3 1 1 83 2 76213463 76213483 GAACAAGATGATTACAGCAGC 59 76213528 76214386 CTGTTCTCCAACAAAGGGA 59 NA Mus musculus 50 Dmrt3 ENSMUSG00000042372 ENSMUST00000048935 2 1 1 90 19 25685744 25696756 GCTTGCTAAACCAGATCTG 58 25696810 25696828 ATCGGTGTCTTTGTCACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Crtac1 ENSMUSG00000042401 ENSMUST00000048630 1 1 1 82 19 42362352 42362370 CAAACTTCAGAACACAGCC 59 42358745 42361669 ATTCATTGGTGTCCATGCA 59 NA Mus musculus 50 Hoxd4 ENSMUSG00000042464 ENSMUST00000047904 3 1 2 94 2 74563953 74563971 ATGAGGGAACTCATTGCTG 59 74564028 74564944 TGAATTCTCCTACAAGCCTG 59 NA InUTR Mus musculus 50 Dcst1 ENSMUSG00000042672 ENSMUST00000070820,ENSMUST00000039572 1 2 2 85 3 89158104 89160168 TCTTCCATTCAGCCTTCTC 58 89158037 89158055 CTGACAGAAGTAGGTGCTG 59 NA Mus musculus 50 Zfp513 ENSMUSG00000043059 ENSMUST00000114590,ENSMUST00000031562,ENSMUST00000087992 2 3 3 95 5 31504023 31504043 CAAGATCTGGAGTTTGAAGAG 58 31503188 31503967 AGAGTCTCCTTCAGAGTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930486G11Rik ENSMUSG00000043289 ENSMUST00000057067 3 1 1 81 9 81821229 81872739 AGTATAAACCGGTTCCAGG 58 81872783 81872802 TAGACTTCCTCAACAAGCTG 59 NA Mus musculus 50 Tmem130 ENSMUSG00000043388 ENSMUST00000061446 3 1 1 86 5 145513210 145513228 CTTTCTTCTCCATGACCCA 58 145511837 145513160 GTTATCAACAAGGTCCCGT 59 NA Mus musculus 50 E130012A19Rik ENSMUSG00000043439 ENSMUST00000052281 1 1 1 76 11 97489685 97489703 CTACATCGAGCACCTTCAG 59 97489627 97489645 TAGGTCTCCGTTCTCTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Edg5 ENSMUSG00000043895 ENSMUST00000054197 1 1 1 60 9 20772201 20772219 CCTTCTCTTAGACTCCACC 58 20772159 20772177 ATAGTGGGCTTTGTAGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 2810474C18Rik ENSMUSG00000044194 ENSMUST00000060568 3 1 1 72 11 97606463 97606481 TGGAACATACCATCTCCAC 58 97606517 97606535 TTTCTAGGCAGGACTTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Defb13 ENSMUSG00000044222 ENSMUST00000060587 2 1 1 85 8 23057305 23058960 ATTCAACTTTACCCAGCCT 58 23059009 23059027 GTAAAGCACTCAGCTTCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1514 ENSMUSG00000044286 ENSMUST00000052560 2 1 1 60 14 52655601 52655619 CACACGCCTATGTACTCTC 59 52655559 52655580 TAGAAGAGTAGCAGAAATCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1514 ENSMUSG00000044286 ENSMUST00000052560 3 1 1 60 14 52655135 52655156 GTACTCTCACCATCTTGATCTC 59 52655096 52655114 GAACGCATTTGTAGGATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Asah3 ENSMUSG00000045019 ENSMUST00000056113 3 1 1 80 17 57098452 57098557 ATGCTCATAGGTCTGTTCTC 58 57098391 57098409 CAGGATGGAGATCTCATCC 58 NA Mus musculus 50 Magi1 ENSMUSG00000045095 ENSMUST00000055224,ENSMUST00000089317,ENSMUST00000093769 1 3 4 80 6 93649791 93651291 GGGAACCCATTTATATCGGT 59 93649730 93649751 TTAATTCATCTCCAGACCTCAG 59 NA Mus musculus 50 Sys1 ENSMUSG00000045503 ENSMUST00000109352 2 1 3 93 2 164283587 164286270 CTAGAGTCCAGGAATGGAC 58 164286327 164286345 GAAGGCAAACGGAAATGAG 59 NA InUTR Mus musculus 50 9930021D14Rik ENSMUSG00000045744 ENSMUST00000054946 2 1 1 107 17 24611411 24611429 CTACTCTAGTGGATGTGGC 58 24611500 24611596 AACAGATGTAGCCGTTCTG 59 NA DesignRelaxed Mus musculus 50 Serpinb9 ENSMUSG00000045827 ENSMUST00000063191,ENSMUST00000006391 2 2 2 86 13 33100003 33100646 AGTCCTCCAAACCTTTAAGG 59 33100695 33100713 GACACCTCTGCTTCTTCAG 59 NA Mus musculus 50 Hs3st2 ENSMUSG00000046321 ENSMUST00000106476 3 1 2 74 7 128536688 128536706 TTCTTCGACAGGAACTACG 59 128540883 128540901 GCTTGTCTTACACAGTCCT 59 NA DesignNoJunction Mus musculus 50 Gprc5a ENSMUSG00000046733 ENSMUST00000050104 1 1 1 96 6 135029492 135033468 AATCACCCAAGGTCTTGAG 59 135033776 135033794 CCTCGGGATAGAGAAATCC 58 NA Mus musculus 50 Tmem162 ENSMUSG00000046826 ENSMUST00000058093 1 1 1 154 7 31762782 31773999 CTTGGCTTCCATCTACAGG 59 31774117 31774135 AACATCTGTAAGTGGCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pcdhb15 ENSMUSG00000047033 ENSMUST00000050034 3 1 1 60 18 37634372 37634390 TGTAGAGGTAATGGACGTG 58 37634412 37634432 GCTATTAAGTGACGACAAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 A530098C11Rik ENSMUSG00000047343 ENSMUST00000061421 1 1 1 81 1 44070612 44074042 GACCCTCAGTAGAGTTCGA 59 44070549 44070567 GTGTAGCTGGCATAGTCTG 59 NA Mus musculus 50 A730013G03Rik ENSMUSG00000047384 ENSMUST00000057543 3 1 1 60 1 194659870 194659889 ATGAACTCTACTGCAGACTG 59 194659829 194659849 CTGATCTCAATCACTCTCCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ifnb1 ENSMUSG00000048806 ENSMUST00000055671 2 1 1 60 4 88168518 88168537 AAGATCAACCTCACCTACAG 58 88168477 88168495 GCATCTTCTCCGTCATCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2810453I06Rik ENSMUSG00000048910 ENSMUST00000067145 3 1 1 102 5 144324261 144324279 TCTCACCGATACTTTGAGC 59 144324345 144324363 GATTGAAACGGTCAAGGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr788 ENSMUSG00000049217 ENSMUST00000056961 2 1 1 60 10 128910570 128910588 TCAATACCTCTGTTGTCCC 58 128910612 128910630 ACTTGCTGGTTCCTTAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NM_147013.2 ENSMUSG00000050577 ENSMUST00000059398 1 1 1 65 2 85960432 85962055 TCAACATAAGGAGCTATGCT 58 85962083 85962101 GAGATGTTCACTTCAGCCA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 BC062109 ENSMUSG00000050640 ENSMUST00000063192,ENSMUST00000100989 3 2 2 152 5 100522118 100524633 TGGATAGTGTACTTTATAGCCG 59 100521796 100521815 GGCCATGTTCATTACTTGAC 59 NA Mus musculus 50 Cited1 ENSMUSG00000051159 ENSMUST00000050551,ENSMUST00000113622,ENSMUST00000101336 3 3 3 85 X 99443946 99443964 GAAATGCCAACTATGTCGA 57 99443325 99443343 GAGTTCATCTCCTGGTTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 EG328354 ENSMUSG00000051729 ENSMUST00000060526 2 1 1 81 14 14117063 14117081 GCAACAGTGGACTAATGTC 58 14003185 14096536 CTTGAACACCTTTAGTTCAGAG 58 NA InUTR Mus musculus 50 Spats2 ENSMUSG00000051934 ENSMUST00000063517 1 1 1 80 15 99016464 99016482 AAAGAAGAGATGGATGCGT 58 99016523 99029657 CACTTCTCGATCCATTAAACAG 59 NA Mus musculus 50 Rnf133 ENSMUSG00000051956 ENSMUST00000063548,ENSMUST00000115354 3 2 2 60 6 23599247 23599266 GCCTAATGAAATAGTTCGGA 57 23599206 23599224 GTCAATGCAATTCTTGTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Serpinb6c ENSMUSG00000052180 ENSMUST00000110273 3 1 2 82 13 33989362 33991146 GATCCAGATAACTCAGGCAC 59 33989299 33989317 GAAGTAACTGGAAGCCCTG 59 NA Mus musculus 50 Slc39a1 ENSMUSG00000052310 ENSMUST00000015467 1 1 1 90 3 90053069 90053249 TAACCATGAAGCTTCAGCC 59 90053303 90053321 GTCCAGAAGACATGTAGCC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Cx3cr1 ENSMUSG00000052336 ENSMUST00000064165 1 1 1 60 9 119960562 119960580 CTTTATCTACGCCTTTGCC 58 119960520 119960538 CTTCCTATACAGGTGTCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Atp6v1a ENSMUSG00000052459 ENSMUST00000114666,ENSMUST00000063661 3 2 2 80 16 44101922 44101940 CTCTACCTCTAGATGGGCT 59 44101777 44101878 GCAGGGTATCCACTATCTG 58 NA Mus musculus 50 ENSMUSG00000052469 ENSMUSG00000052469 ENSMUST00000080075,ENSMUST00000097403 3 2 2 92 17 13549342 13549360 AAGACCTTGAAGAAGCAGG 59 13549416 13552623 TATGTACACTGGCAGAGTG 58 NA Nonspecific Mus musculus 50 Atp6v1e2 ENSMUSG00000053375 ENSMUST00000065758 2 1 1 60 17 87343673 87343692 AGAAGATGCCAGAAATACGA 58 87343632 87343652 GTAAAGAACTTTCTGCTGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trim60 ENSMUSG00000053490 ENSMUST00000048565 2 1 1 60 8 67524812 67524831 CTGTTAGACCATGTTTCCAC 58 67524771 67524789 TTTCATGTATGGCCTCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Exoc6 ENSMUSG00000053799 ENSMUST00000066439 2 1 1 80 19 37656683 37656704 GTCTTAACTGTTCAAGATCTCG 58 37656745 37660312 TTCTTCATCACCCAAAGCA 59 NA Mus musculus 50 A130066N16Rik ENSMUSG00000053889 ENSMUST00000066604 2 1 1 75 9 34729290 34730462 GACATCTATCACGAGTGGG 59 34729233 34729252 GGATACTCCAATTCAATCCC 57 NA DesignNoJunction, InUTR Mus musculus 50 Ercc6 ENSMUSG00000054051 ENSMUST00000066807 2 1 1 83 14 33354531 33359942 AGCTCTTTAAGTATCAGCAGAC 59 33359986 33360004 TTTCGTCTCCCAGAATTCC 59 NA Mus musculus 50 4930517O19Rik ENSMUSG00000054391 ENSMUST00000067431 2 1 1 162 14 100612730 100612750 TCGTGAGATTCAGAGTAATCC 59 100631983 100643836 GTAGAAGCTGTGACCTTGG 59 NA InUTR Mus musculus 50 Ugt1a1 ENSMUSG00000054545 ENSMUST00000073772 3 1 11 255 1 89968232 89968251 CCAGAAGAAGTCACTTTCCA 59 90112453 90112726 AGTCTTTGGATGACCAAGC 59 NA DesignRelaxed Mus musculus 50 Zscan22 ENSMUSG00000054715 ENSMUST00000055528 1 1 1 79 7 13489409 13489427 TATGACTCAACTGCTGGAC 58 13491618 13491636 CTGTATTGCTCTGTTTGCA 58 NA DesignNoJunction Mus musculus 50 ENSMUSG00000055048 ENSMUSG00000055048 ENSMUST00000085241 1 1 1 88 7 64659314 64659333 GAACAAGACACAATAAGGCA 58 64659386 64664140 AAGAGAAGACTGCTCTTGG 58 NA Mus musculus 50 EG546166 ENSMUSG00000055185 ENSMUST00000068626 2 1 1 63 9 120044845 120044863 AAATCAAGGACAACGGAGG 59 120044800 120044818 GGTATGTGTCTCCACTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pcdh9 ENSMUSG00000055421 ENSMUST00000068992,ENSMUST00000074766 2 2 2 82 14 93725953 93725971 ACAGGACGAATTCTACGAC 59 93415096 93725907 GAGGTCCATCAGAATTGGG 59 NA Mus musculus 50 Tmem191c ENSMUSG00000055692 ENSMUST00000069420 1 1 1 75 16 17278266 17278284 CTAGAGTGCATCATGTCGG 59 17278323 17278341 TTCATATAAGCAGGCACCC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Gm1045 ENSMUSG00000055801 ENSMUST00000069543 1 1 1 60 5 92417186 92417204 ATTGGATTTCAAGTCCCTG 57 92417227 92417246 CCTTCCTATTCCTTTCTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Trim34 ENSMUSG00000056144 ENSMUST00000060315,ENSMUST00000106848,ENSMUST00000106854,ENSMUST00000106850,ENSMUST00000106851,ENSMUST00000106849,ENSMUST00000106847 3 7 8 89 7 111396657 111397212 AATGTCAGGAGAATCTCCAG 58 111397263 111397282 TGTCTTCTTTGATGTCAGCT 59 NA Mus musculus 50 Dnahc9 ENSMUSG00000056752 ENSMUST00000080665,ENSMUST00000108691 3 2 4 80 11 65958788 65958806 GATTTCCAAGCATCTCTGG 58 65947204 65958744 TGTCTTCAGAAGATCCTCC 57 NA Mus musculus 50 Bcl2 ENSMUSG00000057329 ENSMUST00000080103 1 1 2 74 1 108608920 108608938 ATGACTGAGTACCTGAACC 58 108439958 108608882 TAGTTCCACAAAGGCATCC 59 NA DesignNoJunction Mus musculus 50 Zfp75 ENSMUSG00000057551 ENSMUST00000079042,ENSMUST00000074379 1 2 2 60 9 19449731 19451146 GCATCTGATGATGTAAGATTGG 59 19451166 19451185 GGCTGAATTCAGAAGATGTC 58 NA DesignNoJunction Mus musculus 50 Rpl32 ENSMUSG00000057841 ENSMUST00000081840 3 1 1 103 6 115755695 115757011 TGCAACAAATCTTACTGTGC 59 115755611 115755629 GGATTGGTGACTCTGATGG 59 NA Nonspecific Mus musculus 50 Cryzl1 ENSMUSG00000058240 ENSMUST00000073466,ENSMUST00000114023 3 2 2 83 16 91707519 91707538 GAATTCTGCCTTTGGATTCC 59 91701436 91707474 TTTCTGGCTTATGAACCAGG 59 NA Mus musculus 50 Olfr798 ENSMUSG00000058304 ENSMUST00000079810 2 1 1 60 10 129062886 129062907 CATTTACCACAGTTTCCATTCC 59 129062847 129062866 ATGGTCATATCTCCTGTCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr698 ENSMUSG00000059087 ENSMUST00000074981 1 1 1 60 7 113896663 113896682 CACATCAGTTATCACTCCCA 59 113896622 113896643 GGATATGGTATTGTCTTTGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 2610301B20Rik ENSMUSG00000059482 ENSMUST00000072099 2 1 3 149 4 10801782 10801800 ACTTCTGGATGAAGTCGAG 58 10801913 10806682 TGTTTCTGTTGATCTGAGAG 57 NA DesignRelaxed Mus musculus 50 C030014I23Rik ENSMUSG00000060380 ENSMUST00000080911 1 1 1 77 9 44287200 44287218 AAACTCCTTTCCCTTTCCG 59 44287259 44287277 CCTGAACTTGGAATTTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 C030014I23Rik ENSMUSG00000060380 ENSMUST00000080911 2 1 1 77 9 44287199 44287217 CAAACTCCTTTCCCTTTCC 58 44287258 44287276 CTGAACTTGGAATTTGGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 4921513D23Rik ENSMUSG00000060657 ENSMUST00000090300,ENSMUST00000078747 2 2 2 80 16 14129787 14129805 CAGGGTTTCAGACTATGGT 58 14128973 14129743 CCCATACCAAGAATCTGCA 59 NA Mus musculus 50 Hist4h4 ENSMUSG00000060981 ENSMUST00000078578,ENSMUST00000102972 1 2 2 96 13 23622927 23622945 TAAGTAATGTGCCTGTGCC 59 23623005 23623023 CTTTGCCAAGACCTTTACC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Myl4 ENSMUSG00000061086 ENSMUST00000018800,ENSMUST00000106957 1 2 3 100 11 104438880 104441728 AGTGTGAAGATAGACTTCAGTG 59 104445336 104445355 CCGTAGGTGATCTTCATCTC 59 NA Mus musculus 50 Mdc1 ENSMUSG00000061607 ENSMUST00000082337 3 1 1 80 17 35991863 35991882 GAAGAACTTTAGCTTCAGCC 58 35991923 35992061 ACATGAATCTCATAGTCCTCC 58 NA Mus musculus 50 5730460C07Rik ENSMUSG00000062046 ENSMUST00000081193 1 1 1 60 3 153453749 153454270 TTGACACTGTCACTGTGAG 59 153453707 153453727 ATCTTGTTATCCTGGGTTCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Btbd9 ENSMUSG00000062202 ENSMUST00000079924,ENSMUST00000114635 3 2 3 85 17 30654103 30654121 GCATTGAGATCAAGCTTGG 59 30650608 30654054 GTAGGAATAAGACCGGCTG 59 NA Mus musculus 50 Opcml ENSMUSG00000062257 ENSMUST00000115243,ENSMUST00000073822 3 2 2 84 9 28482938 28620877 TCTCATAGTGCAAGTTCCTC 59 28620924 28620942 ACATAACAGGGTCACACTG 59 NA Mus musculus 50 Olfr1129 ENSMUSG00000062272 ENSMUST00000081034 3 1 1 88 2 87415568 87415586 TCTTCCTTATGCTTGGAGC 59 87415638 87415656 ATAGTGCAGAGGGTTACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Stk24 ENSMUSG00000063410 ENSMUST00000079817 1 1 1 80 14 121736697 121736715 CAACAAGAGATCACAGTGC 58 121707285 121736658 CTTAGTATCCTTGAGATAGGATCC 59 NA Mus musculus 50 Muc10 ENSMUSG00000064156 ENSMUST00000078656 2 1 1 81 5 88757115 88757250 CTACCACAAATGCAACCAC 59 88757294 88757313 GTAGTTCTGTTGTTTGGTGC 59 NA Mus musculus 50 mmu-mir-30b ENSMUSG00000065476 ENSMUST00000083542 2 1 1 60 15 68169031 68169049 AAACATCCTACACTCAGCT 58 68168989 68169007 AGCTGACGTAAACATCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-let-7c-2 ENSMUSG00000065608 ENSMUST00000083674 1 1 1 60 15 85537046 85537065 TGAGGTAGTAGGTTGTATGG 57 85537085 85537106 GTAGATTGTATAGTTACCGCAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Hnrnpr ENSMUSG00000066037 ENSMUST00000105850,ENSMUST00000084219 1 2 3 80 4 135870102 135870120 ACAAGACACTGATAGAGGC 58 135870164 135872287 AAGCTACCAATCCTGTCTG 58 NA Mus musculus 50 Impad1 ENSMUSG00000066324 ENSMUST00000084949 2 1 1 82 4 4705385 4705403 GAGGTACCAGCAGAAAGTG 59 4703538 4705342 ACATACTTTCGAAGATCCTCTG 59 NA Mus musculus 50 Serpina1a ENSMUSG00000066366 ENSMUST00000072876,ENSMUST00000085056 3 2 2 137 12 105094020 105094038 CTGATGGATTATGCAGGCA 59 105093016 105093919 GATCTGGGCTAACCTTCTG 59 NA Nonspecific Mus musculus 50 Zbtb16 ENSMUSG00000066687 ENSMUST00000093852 2 1 1 288 9 48467938 48473270 CTCACATACAGGTGACCAC 59 48465367 48465385 GATGGTACACTGGTATGGC 59 NA DesignRelaxed Mus musculus 50 Olfr130 ENSMUSG00000067187 ENSMUST00000087129 2 1 1 78 17 38204141 38204159 TGGTGATTTCATCCTGGTG 59 38204201 38204219 GTAGGAGATTAGCACCAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tuba3b ENSMUSG00000067338 ENSMUST00000087445 2 1 1 72 6 145568320 145568338 TATTGCCACCATCAAGACC 59 145568371 145569619 AATACCCACCTTAAATCCAGTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Macrod2 ENSMUSG00000068205 ENSMUST00000110064,ENSMUST00000078027,ENSMUST00000110058,ENSMUST00000110059 3 4 10 89 2 142035869 142043320 AAGAAGATTCAGAAGGGCC 59 142043370 142043391 TGGAGTCTTTAGAACTTTCTGG 59 NA Mus musculus 50 Pdxp ENSMUSG00000068221 ENSMUST00000089378 1 1 1 73 15 78748649 78748667 ATCACAGAAGACTTCAGCG 59 78748704 78748722 AAGAGTATGTCGGTCTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000068601 ENSMUSG00000068601 ENSMUST00000090237 2 1 1 68 6 39370650 39370755 AGGAACTGTCAGAATCCCT 59 39370787 39370805 TGGGATTCCAAGATGTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Actc1 ENSMUSG00000068614 ENSMUST00000090269,ENSMUST00000116448 1 2 2 112 2 113873334 113873866 AGATCAAGATTATTGCTCCC 57 113873241 113873259 ATCATACTCTTGCTTGCTG 57 NA Mus musculus 50 Taar7b ENSMUSG00000069705 ENSMUST00000092658 1 1 1 60 10 23720220 23720239 TTACTGCATTTGTTTCTGGC 59 23720262 23720280 CCATAAATGGTGGACAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxo47 ENSMUSG00000070336 ENSMUST00000093939 1 1 1 80 11 97729975 97734183 ATACTCTCAGAAGTATCCTGC 58 97729915 97729935 CATGCCGTAACATGATAATCC 59 NA Mus musculus 50 Art5 ENSMUSG00000070424 ENSMUST00000106940,ENSMUST00000106934,ENSMUST00000106935 3 3 7 135 7 109246755 109246773 CAACACCTTGTACTGGGAG 59 109245676 109245695 TGTCTTTCCTGATTGCAGAG 59 NA DesignNoJunction Mus musculus 50 Olfr290 ENSMUSG00000070459 ENSMUST00000073468 3 1 1 61 7 92065046 92065065 TGGCACCACTATATTTACCT 58 92065089 92065107 TGTCTCTACCAGGAGAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000010747 ENSMUSG00000070609 ENSMUST00000094510 3 1 1 100 4 144207857 144207875 GACTATTCCAGCCTAAGGC 59 144207939 144209570 ATTGTGGTAACAGTCCAGG 59 NA Mus musculus 50 ENSMUSG00000072655 ENSMUSG00000072655 ENSMUST00000100766 2 1 1 60 6 149234636 149234656 TCATGGACCCTAAAGAATACG 59 149234596 149234617 TTCTACATGTTTCAGTAGAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG666105 ENSMUSG00000073090 ENSMUST00000101425 2 1 1 146 6 48812835 48812853 TATGTGTCGGAGTGTTCTG 59 48814309 48814327 CATGACAGATGCTTTGCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 ENSMUSG00000073551 ENSMUSG00000073551 ENSMUST00000097557 1 1 1 137 18 62900758 62900776 ATTAAGGATTTGGCGTGGA 59 62768469 62774564 TGTGATCTGATAAGCGCTG 59 NA InUTR Mus musculus 50 Pramel4 ENSMUSG00000073724 ENSMUST00000105759,ENSMUST00000084191 1 2 6 88 4 143656669 143656688 TATTATTGGGCCAAGCAGAG 59 143656738 143656802 AATTCCTGGATTGAGGAGTG 59 NA Nonspecific Mus musculus 50 EG625321 ENSMUSG00000073929 ENSMUST00000098177 3 1 1 125 7 111682715 111682982 GAAACACTGGGTTCATGTG 58 111682608 111682628 TACACTCAAATGGTAGGTCTC 58 NA InUTR Mus musculus 50 Wdr57 ENSMUSG00000074088 ENSMUST00000105994,ENSMUST00000098405 3 2 2 90 4 130039995 130042330 CGGCTAATACTGTTGTGGA 59 130042384 130042402 TATAGTGCAGCTCCATCAC 58 NA Mus musculus 50 Slc4a11 ENSMUSG00000074796 ENSMUST00000099362 2 1 1 80 2 130512946 130512964 TGTGGAACAGTTTCTTCCT 58 130512683 130512905 CCTCTGTAGACCTCTTAAAGAG 59 NA Mus musculus 50 Lcmt2 ENSMUSG00000074890 ENSMUST00000099486 2 1 2 68 2 120964409 120964427 CATTAATGCTGCACAACCA 59 120954334 120964377 GACCTCCAATAAGCAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1247 ENSMUSG00000075081 ENSMUST00000111532,ENSMUST00000111531 2 2 4 71 2 89450249 89450268 CAGATGACTAAATGGGAGAG 57 89450197 89450215 CAGTAGGATCCTGAGTGAG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Olfr1110 ENSMUSG00000075159 ENSMUST00000099861 3 1 1 60 2 86976175 86976193 TTGCCTGTATTCTGCAGAG 59 86976133 86976151 AGGAGGATTACTTCTGTCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1053-ps1 ENSMUSG00000075192 ENSMUST00000099897 2 1 1 61 2 86154744 86154762 GAATGCATTCTGCAGAAGG 59 86154701 86154719 CACTGTCAAATGAGACCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 6430510M02Rik ENSMUSG00000075371 ENSMUST00000100138 2 1 1 60 2 37433492 37433511 TACCTTATTTCATGCTGGGA 58 37433451 37433469 GGCATCATATGCTGATGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG432867 ENSMUSG00000075574 ENSMUST00000100493 3 1 1 68 14 63603284 63603302 GAGACTGTATCTGCTCCTC 58 63596692 63603252 ATCCCACTTCTAACTTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ly6a ENSMUSG00000075602 ENSMUST00000023248 1 1 1 84 15 74826932 74826950 CTTGCCCATCAATTACCTG 58 74825894 74826885 TTCCTTGTTTGAGAATCCAC 58 NA Mus musculus 50 IGHV5-15 ENSMUSG00000076648 ENSMUST00000103457 2 1 1 67 12 115065050 115065068 TTCAGTGACTACGGAATGG 58 115065001 115065019 ATGAATGCTACCCACTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-16 ENSMUSG00000076694 ENSMUST00000103503 1 1 1 60 12 115904152 115904173 CACATTGACTGTAGACATATCC 58 115904113 115904133 AGATGTCAATCTGCTAAGCTC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A2A4R7_MOUSE ENSMUSG00000078130 ENSMUST00000104929 2 1 1 91 11 99511530 99511548 ATTCACTGCACTCACTCTC 59 99511457 99511475 CTCTTCAGAGCAGACAGAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Klhl17 ENSMUSG00000078484 ENSMUST00000105569,ENSMUST00000105568 2 2 2 87 4 155606795 155606813 AGAGGAAGATGTGTACCGT 59 155606498 155606744 ACACTTCATCAACCTTGGT 59 NA Mus musculus 50 NP_001079007.1 ENSMUSG00000078662 ENSMUST00000107320 2 1 2 65 4 73535364 73535382 ATCCTGTACGAGATCTTGG 58 73533374 73535335 ATTATACAGAGCACCTGGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 NP_001079007.1 ENSMUSG00000078662 ENSMUST00000107320 3 1 2 80 4 73535377 73535397 TCGACTTATGAATGGATCCTG 59 73533374 73535335 ATTATACAGAGCACCTGGC 59 NA Nonspecific Mus musculus 50 Zfp566 ENSMUSG00000078768 ENSMUST00000088785 1 1 1 62 7 30866136 30866154 ACAGAGATGTGATGTTGGA 58 30863620 30866110 CACATCTTGACTCCAGGAC 59 NA DesignNoJunction Mus musculus 50 MGI:3650082 ENSMUSG00000078862 ENSMUST00000108932,ENSMUST00000108930,ENSMUST00000099000,ENSMUST00000108928 1 4 5 80 2 177683188 177683207 ATCCTTCTCAGAAGAGTCTC 57 177682921 177683148 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 NP_001074884.1 ENSMUSG00000079003 ENSMUST00000095228 3 1 1 145 8 86523518 86523626 CAAGAGCAGGAAATTGATGG 59 86523734 86523752 TCATCATCCTCAAAGTGGC 59 NA Mus musculus 50 Mmrn1 ENSMUSG00000079549 ENSMUST00000114267 1 1 1 121 6 60879294 60894321 ATTTCCAGCTTCTCAGAGG 58 60894406 60894424 GGTTTCTGTGTTTGCAGTG 59 NA InUTR Mus musculus 50 LOC436420 ENSMUSG00000079558 ENSMUST00000088537 2 1 1 166 9 51829125 51829143 CAACAACCAACACCAACTG 59 51811293 51811311 CAACAATCTCCACTTTGCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Q3U0W5_MOUSE ENSMUSG00000079643 ENSMUST00000115260 3 1 1 106 5 20291154 20291172 TTCTCCTGCCTAGACTCTC 59 20291066 20291086 AATAACTACGCACTCTAAGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ddb2 ENSMUSG00000002109 ENSMUST00000111352,ENSMUST00000099721,ENSMUST00000028696 3 3 3 81 2 91052661 91052679 AGATGTGTTTGATGGAAGC 58 91052474 91052618 CTCATTGAGCGAAGTAATACC 58 NA Mus musculus 50 4930432K09Rik ENSMUSG00000002240 ENSMUST00000002310 1 1 2 80 5 88264751 88270293 CAAAGAGGAAATCACCCTC 57 88271685 88271703 ACGGGATATTCAGAGATGG 58 NA Mus musculus 50 Ebi3 ENSMUSG00000003206 ENSMUST00000003274 3 1 1 134 17 56093422 56093441 TCCTTCATTGCCACTTACAG 59 56093822 56093840 ATTTAGCATGTAGGGCACC 59 NA DesignNoJunction Mus musculus 50 Csnk1g2 ENSMUSG00000003345 ENSMUST00000019676 2 1 3 169 10 80100915 80100933 CTCAGGTCTACTACTTCGG 58 80101150 80101951 GTAGTCAAACACGTAGTCC 57 NA Mus musculus 50 Nfat5 ENSMUSG00000003847 ENSMUST00000075922,ENSMUST00000077440,ENSMUST00000109265 3 3 3 84 8 109879707 109882537 GGAGTTATTCCATCAGAACC 57 109882584 109882602 TATTCCCACTGATACAGGC 58 NA Mus musculus 50 Tfam ENSMUSG00000003923 ENSMUST00000105432,ENSMUST00000092430 3 2 2 73 10 70697617 70697636 AAGAAAGCACTGGTAAAGAG 57 70696151 70696170 ATGTTATATGCTGAACGAGG 57 NA DesignNoJunction Mus musculus 50 Psap ENSMUSG00000004207 ENSMUST00000105465,ENSMUST00000004316 2 2 2 161 10 59758733 59761846 CAGATGTTGATGCACATGC 59 59761970 59762223 GACCAGATTCTGCTCATAGG 59 NA Mus musculus 50 Clcn3 ENSMUSG00000004319 ENSMUST00000110302,ENSMUST00000004430 3 2 6 108 8 63393619 63398149 TAACTCACAACGGGATTGTC 59 63391953 63391971 TTATAATGCCAAGGAGGCG 59 NA Mus musculus 50 Cd44 ENSMUSG00000005087 ENSMUST00000005218,ENSMUST00000111200,ENSMUST00000111199,ENSMUST00000111198,ENSMUST00000111197,ENSMUST00000111196,ENSMUST00000060516,ENSMUST00000111195,ENSMUST00000111194,ENSMUST00000111191,ENSMUST00000111190 1 11 15 88 2 102671684 102672648 CATCTAGCACTAAGAGCGG 59 102671614 102671633 AAAGGTGTAGCCTTCTACAG 59 NA Mus musculus 50 AA536749 ENSMUSG00000005417 ENSMUST00000116371,ENSMUST00000108751,ENSMUST00000072031,ENSMUST00000108753,ENSMUST00000108750 3 5 8 113 11 59555560 59555578 CCAAGTCATTGGACAGGAG 59 59557327 59558269 ACCAGTGTTTCTTCCACTG 59 NA Mus musculus 50 Eif4g2 ENSMUSG00000005610 ENSMUST00000005750 3 1 2 87 7 118219851 118219869 CTTATCCCAGCTACAAGGA 58 118219215 118219802 CCTCAAACTAATCTCATCTGC 58 NA Mus musculus 50 Scnm1 ENSMUSG00000005629 ENSMUST00000107226,ENSMUST00000005770 3 2 2 85 3 94937024 94937130 ATTTGTCCAGTCTGAAGCT 58 94936957 94936976 CTTCAATTCGTTCTGCTGTC 59 NA Mus musculus 50 Med8 ENSMUSG00000006392 ENSMUST00000084319,ENSMUST00000073881,ENSMUST00000019229,ENSMUST00000106384 3 4 4 99 4 118084321 118084341 GTCTTAAAGCATGAGAAGACG 59 118084402 118084969 CTTCAGTTTGACGCATGAG 59 NA Mus musculus 50 Hnrph1 ENSMUSG00000007850 ENSMUST00000109142,ENSMUST00000069304 2 2 3 135 11 50197389 50197408 TATGGTAGCCAAATGATGGG 59 50198229 50198651 AAACTTGGTCATATCCGCT 58 NA Mus musculus 50 Prpf31 ENSMUSG00000008373 ENSMUST00000108635 2 1 3 112 7 3582340 3582455 AGATGGTGAGTTTGCTGAG 59 3584293 3584311 CAATGACTCGGTACTCAGG 59 NA Mus musculus 50 Nfib ENSMUSG00000008575 ENSMUST00000107246,ENSMUST00000107250 1 2 8 84 4 81973681 81973701 CTGAATCCTCAGGATACTCTG 59 81956280 81973635 AGTCACAAATCCTCAGCTG 59 NA Mus musculus 50 Man1a2 ENSMUSG00000008763 ENSMUST00000008907 3 1 2 82 3 100448533 100450922 TCAGTGTGAATTCAGAAGTG 57 100448470 100448488 TCCTGACAGGTAATATGCA 57 NA Mus musculus 50 Lnp ENSMUSG00000009207 ENSMUST00000064503,ENSMUST00000111993,ENSMUST00000102676 3 3 3 84 2 74386035 74386054 ATCCAGACTCAAAGAAAGCA 59 74375549 74385903 TGACGAATCTCTTGTCCTG 59 NA Mus musculus 50 Taf7l ENSMUSG00000009596 ENSMUST00000113223 1 1 2 83 X 131004700 131005034 TCCTGAAGTTACTCCACCA 59 131002459 131002478 ACTTGTTTCACATCTGGGAG 59 NA Mus musculus 50 Adam19 ENSMUSG00000011256 ENSMUST00000011400,ENSMUST00000101315 1 2 3 83 11 45952405 45952423 GTCACTGCTACAGACAGAG 59 45952470 45953205 TGAAGGGACAACTGAACTG 59 NA Mus musculus 50 Ttll5 ENSMUSG00000012609 ENSMUST00000110219,ENSMUST00000040273,ENSMUST00000040179 2 3 6 60 12 87260138 87260159 GAGTCTAAATTCAACCTGATGC 59 87260178 87263918 CCTGTACTTTGCTTAGATTGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Nit1 ENSMUSG00000013997 ENSMUST00000111289,ENSMUST00000014141,ENSMUST00000111295 3 3 3 97 1 173273948 173274202 CAGCAAGGGATCAGTAGTG 59 173273869 173273889 GCTTGGTATAGTTGCTTTCTC 59 NA Nonspecific Mus musculus 50 Cd40 ENSMUSG00000017652 ENSMUST00000109305 2 1 4 131 2 164882312 164887796 TATCCCAGGTCCATCTAGG 59 164888187 164888205 ATTGGGTCTTCTCAAGAGC 59 NA Mus musculus 50 5830472M02Rik ENSMUSG00000017679 ENSMUST00000109408 1 1 2 90 2 163433335 163433353 GTTCTCAACTCTGGATTCC 57 163433407 163437509 TTGGTATCCATCTGTCTGG 58 NA Mus musculus 50 Rhot1 ENSMUSG00000017686 ENSMUST00000077451,ENSMUST00000055056,ENSMUST00000017831,ENSMUST00000092857 2 4 4 80 11 80064617 80066475 AAATACTTGTTGCTGCACG 59 80066518 80066537 TACCAGGCATACAACATCAC 59 NA Mus musculus 50 Nkiras2 ENSMUSG00000017837 ENSMUST00000107376,ENSMUST00000051947,ENSMUST00000017981 1 3 3 60 11 100485569 100485588 AAACTTCAATCCTTGAGCAG 58 100485611 100486272 TCGATCATCTCAGAACCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Cdk5rap3 ENSMUSG00000018669 ENSMUST00000107640 1 1 3 76 11 96769769 96769787 AATTAGCTTCCTGAGCCTC 59 96769711 96769729 CATACCTGTGCAGATGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sema6a ENSMUSG00000019647 ENSMUST00000019791,ENSMUST00000115449 1 2 4 131 18 47409229 47430271 ACAAGAAGGGAGTGATTCG 59 47409116 47409134 CACAATACACGATGATGCC 58 NA Mus musculus 50 Lama2 ENSMUSG00000019899 ENSMUST00000092639,ENSMUST00000092638 2 2 3 80 10 26951504 26955532 CAGGAGAATGTCTGAACTG 57 26951442 26951461 TAGGATCACCATAGAAACCA 57 NA Mus musculus 50 Herc4 ENSMUSG00000020064 ENSMUST00000092452 1 1 2 86 10 62761977 62766600 CCTATGGAGTGGATGTCAG 58 62769128 62769147 GGGCATCAAATACAAATGGA 58 NA Mus musculus 50 Papolg ENSMUSG00000020273 ENSMUST00000020513,ENSMUST00000102863 1 2 2 81 11 23785563 23790240 AGTGAAAGTAAGAATCTCCCAC 59 23785503 23785521 CTCCAAGCCTGTAAGATCC 59 NA Mus musculus 50 Xpo1 ENSMUSG00000020290 ENSMUST00000020538,ENSMUST00000109551,ENSMUST00000102870,ENSMUST00000102869 2 4 5 88 11 23185141 23185159 AGTTGGAGAAGTAATGCCG 59 23185211 23185810 ATGTATGAACCTGCTGAGG 59 NA Mus musculus 50 Hmmr ENSMUSG00000020330 ENSMUST00000109303,ENSMUST00000020579 3 2 3 107 11 40535219 40535237 TGATGGTCAAACAGGAAGG 59 40529435 40535151 CTATTGAAACAAGCTTTCCCTC 59 NA Mus musculus 50 Hmmr ENSMUSG00000020330 ENSMUST00000109303 2 1 3 83 11 40523463 40523481 GTTGGAAAGTGTGCAAGAG 59 40523303 40523416 TTACGGTAATGGCTTTCCA 58 NA Mus musculus 50 Galnt10 ENSMUSG00000020520 ENSMUST00000066987,ENSMUST00000108846 1 2 2 118 11 57459216 57534812 TCAGGAATTACACAGTCGAC 59 57534893 57539036 GTTCTCCATATCCTACGCG 59 NA Mus musculus 50 Galnt10 ENSMUSG00000020520 ENSMUST00000066987,ENSMUST00000108846 3 2 2 119 11 57459216 57534811 TCAGGAATTACACAGTCGA 57 57534894 57539037 TGTTCTCCATATCCTACGC 58 NA Mus musculus 50 Pum2 ENSMUSG00000020594 ENSMUST00000111123,ENSMUST00000020915 2 2 3 81 12 8740301 8750570 CCAGTTTGCATTTAGGAGG 58 8750615 8750633 CTTCGGTACTTTGCTTCTG 58 NA Mus musculus 50 Spag9 ENSMUSG00000020859 ENSMUST00000024979 3 1 8 81 11 93973389 93973408 TTATGGTGTCTTGCAATCGT 59 93973451 93974586 AGGATTACGGTTTCTGTCAG 59 NA Mus musculus 50 Sgpp1 ENSMUSG00000021054 ENSMUST00000021450,ENSMUST00000110428 1 2 2 83 12 76817640 76823646 CTATCCTGGATGTCATTGCT 59 76817576 76817594 AGTTGTCAATCAGGTCCAC 59 NA Mus musculus 50 Trip11 ENSMUSG00000021188 ENSMUST00000110038 3 1 3 187 12 103133890 103133909 ACAAAGCTCTGATCAAACTG 58 103128820 103131996 TTTCAGCATCGTAACTCCT 58 NA Mus musculus 50 Hspg2 ENSMUSG00000021589 ENSMUST00000022078 1 1 2 80 13 76016408 76030362 AAATACAAGGAGCAACTGTG 58 76016347 76016365 TACCATTAAACATGGCAGC 58 NA Mus musculus 50 Gfm2 ENSMUSG00000021666 ENSMUST00000042084 3 1 3 179 13 97925547 97930984 ATTGAACAATTACAGGCTGC 59 97932810 97932828 CAAGTCACCCTCATACCAC 59 NA Mus musculus 50 1700049K14Rik ENSMUSG00000021966 ENSMUST00000111173,ENSMUST00000022537 3 2 2 73 14 64728477 64728495 GAGTGGTGGGTTCTATCTG 59 64729477 64729495 GTGCCATGAATGATCTCCA 59 NA DesignNoJunction Mus musculus 50 Tnfsf11 ENSMUSG00000022015 ENSMUST00000022592,ENSMUST00000110858 1 2 2 91 14 78699659 78699677 ATGAAACAAGCCTTTCAGG 58 78684132 78684232 CCTTCCATCATAGCTGGAG 59 NA Mus musculus 50 Tnk2 ENSMUSG00000022791 ENSMUST00000115124,ENSMUST00000115123,ENSMUST00000023480,ENSMUST00000115122 1 4 6 80 16 32681070 32681244 CAGTATCTGAAGGTGGAGC 59 32681288 32681306 GTCGAACATCTCTAGGACC 58 NA Nonspecific Mus musculus 50 Atp6v0c ENSMUSG00000024121 ENSMUST00000024932,ENSMUST00000098862 2 2 2 62 17 24301745 24301763 ATCATCCCAGTGGTTATGG 58 24301701 24301719 GATAAGTACTGCCACCACC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Atp9b ENSMUSG00000024566 ENSMUST00000025458 3 1 3 100 18 80932881 80933561 CGCTTTCTTAGATGTTGCC 59 80932799 80932817 AGTACTTGAGCACGTAGAG 58 NA Mus musculus 50 Slc18a2 ENSMUSG00000025094 ENSMUST00000026084 2 1 2 81 19 59348886 59348994 GGATGGAGCTATTCAGCTC 59 59349117 59349135 CAAGGTCGTAAGAGGTGTC 59 NA Mus musculus 50 Anapc11 ENSMUSG00000025135 ENSMUST00000026128,ENSMUST00000093140 3 2 2 150 11 120460672 120466602 CTGTCCAGACTGTAAGGTG 59 120466716 120466734 TTTGAACTTCCACTCCTGG 59 NA Nonspecific Mus musculus 50 Ptprj ENSMUSG00000025314 ENSMUST00000111495,ENSMUST00000026352,ENSMUST00000111493 2 3 3 82 2 90298582 90299614 AATCTGTTCTGTACGGAACC 59 90298519 90298537 CACTTGAGAACCAATGCTG 59 NA Mus musculus 50 Gaa ENSMUSG00000025579 ENSMUST00000106259,ENSMUST00000106258,ENSMUST00000026666 2 3 4 83 11 119131920 119131938 CTTCTTCCCAAAGGATGTG 58 119131983 119134194 GGATCTTTGATCTTGAAGTGG 58 NA Mus musculus 50 Dach2 ENSMUSG00000025592 ENSMUST00000113380,ENSMUST00000113378,ENSMUST00000067219,ENSMUST00000113381 1 4 6 109 X 110931344 110931362 TACATCTGGTGACAGTGGA 59 110933614 110949016 AGTTACCTCCTTGCATAGC 59 NA Mus musculus 50 Idh1 ENSMUSG00000025950 ENSMUST00000027087 3 1 2 111 1 65207625 65207643 TGCATTAAAGGCTTACCCA 59 65206036 65206056 ACCTTAAAGTTTGCTGAGC 58 NA Mus musculus 50 Dtymk ENSMUSG00000026281 ENSMUST00000027503,ENSMUST00000112894 2 2 3 171 1 95697415 95697433 AACTAGAGGATCACTCCGT 59 95691475 95691493 TGTTTACACCAATCCAGGG 59 NA DesignNoJunction Mus musculus 50 Pctk3 ENSMUSG00000026437 ENSMUST00000027697 2 1 2 106 1 134015514 134015688 CTATTCGAGAGGTGTCTCTG 58 134015427 134015445 CAGGTACTCAAACACCAGG 59 NA Mus musculus 50 Nfasc ENSMUSG00000026442 ENSMUST00000043189 2 1 2 91 1 134498611 134498629 TATGAGATCCGAGTCCAGG 59 134496782 134498556 GCCCTGGGATAATCTTCTC 59 NA Mus musculus 50 Pfkfb3 ENSMUSG00000026773 ENSMUST00000091464,ENSMUST00000114846,ENSMUST00000114845,ENSMUST00000028114,ENSMUST00000114844,ENSMUST00000100411,ENSMUST00000049849 2 7 7 84 2 11405608 11405626 GAGATACCTACCCTGAGGA 58 11404188 11405560 AGATCCTGGTAGGACTCTC 59 NA Mus musculus 50 Acvr1 ENSMUSG00000026836 ENSMUST00000112599,ENSMUST00000090935,ENSMUST00000112601,ENSMUST00000056376 1 4 5 80 2 58311344 58311365 TATAAGAGGGTCGATATTTGGG 58 58300845 58311305 TTCCACTATACCATTGCTCAC 59 NA Mus musculus 50 Wdr5 ENSMUSG00000026917 ENSMUST00000113953 2 1 2 80 2 27380657 27380676 TTTCCAGTAGCTATGATGGC 59 27383830 27386480 TCACAAACACAATGAGTGTC 58 NA Mus musculus 50 Neb ENSMUSG00000026950 ENSMUST00000028320 1 1 6 80 2 52076508 52077167 TCAGTGAGCCATTGTATCG 59 52076446 52076464 GCAACATCACAGGTATGTC 58 NA Mus musculus 50 Grin1 ENSMUSG00000026959 ENSMUST00000114318,ENSMUST00000114314,ENSMUST00000114310,ENSMUST00000028335 1 4 8 103 2 25150058 25151320 AACCTGCAGGATAGAAAGAG 59 25149974 25149992 CTACGTCTCTTGAAGCTGG 59 NA Mus musculus 50 Arrdc1 ENSMUSG00000026972 ENSMUST00000028349,ENSMUST00000114414 2 2 4 162 2 24782192 24782211 TATAAGCTGGTGAAGACTGG 58 24781953 24782071 CCTTATAGGATACCTTCTGTAGC 59 NA Mus musculus 50 Wdr85 ENSMUSG00000026975 ENSMUST00000028351,ENSMUST00000116576 2 2 2 102 2 24824451 24824469 CACACCTGTCTTCACTAGC 59 24824629 24825038 ATGCTCATCATAGCTTCCAG 59 NA Mus musculus 50 Ssfa2 ENSMUSG00000027007 ENSMUST00000028393,ENSMUST00000111788,ENSMUST00000111785,ENSMUST00000111784 2 4 4 80 2 79498499 79500403 TTTCACAGTATCCTATGACGAG 59 79500444 79500462 AAAGAGGTAGGACAGACGA 59 NA Mus musculus 50 Nat10 ENSMUSG00000027185 ENSMUST00000090447 1 1 2 111 2 103566905 103566923 TTGTACTTCCTGAACCAGC 59 103565910 103566830 CATTGAACAGCAACAGCTC 59 NA Mus musculus 50 Adam33 ENSMUSG00000027318 ENSMUST00000077541 3 1 4 129 2 130879228 130879246 CACAATTCTCCTAGAGGGC 59 130877278 130879137 GGTATGTCTCATTCTAGGTCC 59 NA Mus musculus 50 Prei4 ENSMUSG00000027346 ENSMUST00000063729,ENSMUST00000028822,ENSMUST00000060955,ENSMUST00000110136,ENSMUST00000110137,ENSMUST00000110142 3 6 7 88 2 132368032 132368050 GATGTCCACCTTTCAAAGG 58 132366082 132367982 GGATCAGCTTCATATTTCCTC 58 NA Mus musculus 50 Prei4 ENSMUSG00000027346 ENSMUST00000028822,ENSMUST00000060955,ENSMUST00000110136,ENSMUST00000110142 2 4 7 87 2 132376279 132379701 GAGATTTAGGGTAAAGCTCAC 58 132376212 132376230 TTTGTGAAGAACAGTGGGA 58 NA Mus musculus 50 Bcl2l11 ENSMUSG00000027381 ENSMUST00000110341,ENSMUST00000103210,ENSMUST00000050696 2 3 6 130 2 127954746 127972834 AATGGCTTCCATACGACAG 59 127972927 127983982 AATCATTTGCAAACACCCTC 59 NA Mus musculus 50 Bfsp1 ENSMUSG00000027420 ENSMUST00000099296,ENSMUST00000028907 2 2 2 91 2 143674727 143674745 CTTATTGCGTAACCTGCAC 59 143671717 143674675 CCAGAAGATTCTTCTTGTACCT 59 NA Mus musculus 50 Lime1 ENSMUSG00000027582 ENSMUST00000029105,ENSMUST00000108807,ENSMUST00000116366,ENSMUST00000108806,ENSMUST00000108805,ENSMUST00000087416 1 6 8 84 2 181113147 181113165 TAAGCTTACTGCAGACTGG 58 181113213 181113465 TTGTCCACATCAGTGATCC 59 NA Mus musculus 50 2610304G08Rik ENSMUSG00000027651 ENSMUST00000109517,ENSMUST00000109519,ENSMUST00000029180,ENSMUST00000103123,ENSMUST00000099135,ENSMUST00000109518 2 6 6 83 2 157873697 157873716 AAGAGGAGGAAGATGATGAC 58 157873759 157875838 TGATTAACTCCTCAGTCAAGAG 59 NA Mus musculus 50 Mbnl1 ENSMUSG00000027763 ENSMUST00000029327,ENSMUST00000099087 1 2 3 136 3 60425349 60425367 AATATTGTGCATGACACCC 58 60426154 60429055 TTATGGGTATCTGGTTGGC 59 NA Mus musculus 50 Adar ENSMUSG00000027951 ENSMUST00000098924,ENSMUST00000107405,ENSMUST00000107404 1 3 4 92 3 89549514 89549750 TCCAAAGACACTTCCTCTC 58 89549806 89549824 TGGAAACTGTTGGTCAGAG 59 NA Mus musculus 50 Olfm3 ENSMUSG00000027965 ENSMUST00000081752,ENSMUST00000051309 2 2 2 82 3 114804874 114804895 CTATGAAGAACTTCATCAACGG 59 114804937 114823826 TCAATTTGCCACATGTTAGC 59 NA Mus musculus 50 Lrat ENSMUSG00000028003 ENSMUST00000029632 3 1 1 60 3 82707111 82707129 GATATGGCTCTCGGATCAG 59 82701025 82701044 ATGATTATCTTCACGGTGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pip5k1a ENSMUSG00000028126 ENSMUST00000107235 2 1 3 194 3 94875859 94875877 ATCATTAAGACCGTCCAGC 59 94869356 94874823 GAACACTGTGTTGACTGAC 58 NA Mus musculus 50 Fktn ENSMUSG00000028414 ENSMUST00000107638 3 1 3 80 4 53750464 53750485 TTCTAGAAGAAGTACCTCACTC 58 53750526 53757503 CATCAATGTACTGCTGGAG 57 NA Mus musculus 50 Cpt2 ENSMUSG00000028607 ENSMUST00000030345,ENSMUST00000106720,ENSMUST00000106719 2 3 4 86 4 107586923 107586944 CTATCCCTAAACTTGAAGACAC 58 107585342 107586876 CTTCTGTCTTCCTGAACTG 57 NA Mus musculus 50 Nsun4 ENSMUSG00000028706 ENSMUST00000030474 3 1 3 81 4 115712825 115713492 GGTACCACAGGTAATCTAGC 59 115712763 115712781 GCACATAACTGTGAAGGAC 58 NA Mus musculus 50 Dmbx1 ENSMUSG00000028707 ENSMUST00000064806 3 1 2 134 4 115596355 115596373 ACGCTATGAACTCACTCAG 59 115593317 115596257 CTTGAAATGTACAGCCAGC 59 NA Mus musculus 50 Capzb ENSMUSG00000028745 ENSMUST00000102507,ENSMUST00000116268 1 2 6 139 4 138842958 138842976 AACTGTGAGTGACTGTTCC 59 138843740 138844786 CATCAAGAGATCTCAGCCC 59 NA Mus musculus 50 Clcn6 ENSMUSG00000029016 ENSMUST00000105711,ENSMUST00000030879 2 2 3 81 4 147391656 147391675 TTCAACTGTCTGAACAAGAG 57 147391077 147391612 TCTCTAAGACTCTGACGAG 57 NA Mus musculus 50 Ccnl2 ENSMUSG00000029068 ENSMUST00000030944,ENSMUST00000030945,ENSMUST00000116250 2 3 3 87 4 155189397 155189418 GAACCAGATTATAAAGGCAGAG 58 155189463 155192043 CATAACGATTATCTTGTGAGGG 58 NA Mus musculus 50 Agbl5 ENSMUSG00000029165 ENSMUST00000069705,ENSMUST00000061213,ENSMUST00000031057,ENSMUST00000114696,ENSMUST00000046182 3 5 6 102 5 31193051 31193069 AGCAAACTGTATTCCCAGG 59 31193134 31193442 TCTCTGTCATCTCAAAGGTG 59 NA Nonspecific Mus musculus 50 Gnrhr ENSMUSG00000029255 ENSMUST00000094654 3 1 2 60 5 86614321 86614340 AAATCATCTTTGCTCTCACG 58 86614280 86614299 CTAAGGAATACCGTACTGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Vps29 ENSMUSG00000029462 ENSMUST00000111729,ENSMUST00000031418 1 2 2 80 5 122810152 122810172 GCTACGACTATCTCAAGACTC 59 122810211 122812063 GTTCTGGGTAATTCAGATTCTC 58 NA Mus musculus 50 Atp2a2 ENSMUSG00000029467 ENSMUST00000100740 2 1 2 164 5 122907534 122907552 ACTTCTTGATCCTCTACGT 57 122906971 122907322 TAATTATGTCGGGTTGTTCC 57 NA Mus musculus 50 Fbxl10 ENSMUSG00000029475 ENSMUST00000046073,ENSMUST00000086200 1 2 3 125 5 123382574 123382592 GAATTTGAACTGAAGGGCT 57 123371472 123382488 CAGTACATTCTTTACACCTTCC 58 NA Mus musculus 50 Calu ENSMUSG00000029767 ENSMUST00000090481 3 1 2 97 6 29306612 29306630 GACTATGACCATGATGCCT 58 29306690 29311571 TCTACAATCATTCCAAGCCT 58 NA Mus musculus 50 Itpr1 ENSMUSG00000030102 ENSMUST00000032192,ENSMUST00000113208,ENSMUST00000113207,ENSMUST00000113204 3 4 4 80 6 108330997 108331016 CCTTTCAGACATATTTGCCG 59 108331057 108331190 TATGTACTCCTGGTTCTTCCT 59 NA Mus musculus 50 Gas2 ENSMUSG00000030498 ENSMUST00000107592,ENSMUST00000051912,ENSMUST00000107591 1 3 3 89 7 59208659 59248666 CCTCTTCATCAGGATGCTG 59 59248719 59248737 TCATGCTTGAGCAGATAGC 59 NA Mus musculus 50 Pex11a ENSMUSG00000030545 ENSMUST00000032761,ENSMUST00000098352 1 2 2 80 7 86885103 86885121 TAAAGCTGACAAAGAGGCC 59 86882787 86885059 AGTCTGAACCATTTACGGC 59 NA Mus musculus 50 Smarca1 ENSMUSG00000031099 ENSMUST00000115040,ENSMUST00000115035 1 2 6 81 X 45211482 45211500 ATTATTGTATGTGGCGTGG 57 45208777 45211437 TCCAGGAACTTATCCTCTC 57 NA Mus musculus 50 Prickle3 ENSMUSG00000031145 ENSMUST00000033485,ENSMUST00000115710 3 2 2 89 X 7242179 7242197 TACTTCTATCATGCTGGCA 58 7242249 7242361 GAAGATGATCTCATCACACG 58 NA Mus musculus 50 Rbm3 ENSMUSG00000031167 ENSMUST00000040010,ENSMUST00000115619,ENSMUST00000115621,ENSMUST00000115617,ENSMUST00000115616,ENSMUST00000115615,ENSMUST00000115620 2 7 7 60 X 7720874 7720988 GCAGTTACTCTAGAGGTGG 58 7720832 7720851 GGACGACTGTCATATCTTCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ftsj1 ENSMUSG00000031171 ENSMUST00000033513 2 1 3 150 X 7822776 7823477 CTGAACCACTCATATGATACAG 58 7822568 7822589 GAGTATATTTGTACTCAGAGCC 57 NA Mus musculus 50 Irak1 ENSMUSG00000031392 ENSMUST00000114352,ENSMUST00000068286,ENSMUST00000114360,ENSMUST00000114714,ENSMUST00000114347,ENSMUST00000114344,ENSMUST00000114334,ENSMUST00000033769,ENSMUST00000114354,ENSMUST00000073369,ENSMUST00000101458 2 11 13 132 X 71265706 71265724 GGAGTACATCAAGACAGGC 59 71263697 71265251 CAGGTCTTTCAAATACTTGGTC 59 NA Mus musculus 50 Kirrel3 ENSMUSG00000032036 ENSMUST00000077837,ENSMUST00000045091 1 2 5 80 9 34831167 34831187 GACCATATACAACTGTACAGC 58 34831229 34835926 GGTACAGACTCTTGTTCCT 58 NA Mus musculus 50 Impg1 ENSMUSG00000032343 ENSMUST00000113250,ENSMUST00000085289 3 2 2 80 9 80231341 80234706 CCGTGTATTAGGATTTAGACCA 59 80229643 80229663 CTCTTAAAGATGGCCATAAGC 58 NA Mus musculus 50 Mtap4 ENSMUSG00000032479 ENSMUST00000065171 2 1 3 149 9 109971356 109971374 CTTCCACTAAGCCTAGCTC 59 109971487 109980522 TGTTCTGAATCTGAACCCG 59 NA Mus musculus 50 Stac ENSMUSG00000032502 ENSMUST00000098332,ENSMUST00000035083 1 2 2 98 9 111465221 111474775 AGAACCAGATATGCGTGAC 59 111465141 111465159 CTACCAGTACATCCAGTGG 58 NA Mus musculus 50 Eml4 ENSMUSG00000032624 ENSMUST00000049503,ENSMUST00000112363 1 2 4 85 17 83827351 83839376 TCATCGTCAATCAAGAAGGAG 59 83839423 83839441 GTTGTCAACATCCGAAGGA 59 NA Mus musculus 50 Mier3 ENSMUSG00000032727 ENSMUST00000109270,ENSMUST00000109271,ENSMUST00000047412 2 3 4 122 13 112500004 112501903 AGGCATCTCAAGGAATGAC 59 112504449 112504467 CAACCGTTCTAGACCTCAC 59 NA Mus musculus 50 Centd2 ENSMUSG00000032812 ENSMUST00000107011,ENSMUST00000107010,ENSMUST00000098246,ENSMUST00000084896 2 4 6 177 7 108533547 108534076 TGAGTTTGACGACTCTGAC 59 108534749 108534767 ATGGTCATCGTCATCTTCC 59 NA Mus musculus 50 D030074E01Rik ENSMUSG00000033382 ENSMUST00000025177 3 1 2 80 18 21000077 21000096 CATCTGTAAAGTACGGTCCT 58 20995678 21000035 GTATAAAGAACACCTCCAGC 57 NA Mus musculus 50 4930481F22Rik ENSMUSG00000033409 ENSMUST00000098387,ENSMUST00000095173,ENSMUST00000034219 1 3 3 60 8 116175524 116175542 AGATTGAGGACCTGATCCA 59 116175644 116175662 GATCTCTTCTTTGCTGGAC 57 NA DesignNoJunction Mus musculus 50 Prickle4 ENSMUSG00000033475 ENSMUST00000113302 2 1 2 97 17 47824207 47824225 CAATTTGGGACTCTTTGCT 58 47823949 47824146 TTCCATTCTCTGGCTACAC 58 NA InUTR Mus musculus 50 Bai3 ENSMUSG00000033569 ENSMUST00000115218,ENSMUST00000115223,ENSMUST00000115225,ENSMUST00000041838 2 4 4 80 1 25188236 25278613 CACAATAAGAGCATCTGCAC 59 25188175 25188193 CTCTGTCAAGACCCAACAG 59 NA Mus musculus 50 Acbd6 ENSMUSG00000033701 ENSMUST00000035560,ENSMUST00000097529,ENSMUST00000080138 1 3 3 113 1 157411793 157411812 GTTGGAAATTGCAATACTCC 57 157414751 157414769 ATATTCCTGCATTGCTTGG 58 NA DesignNoJunction Mus musculus 50 Zcchc11 ENSMUSG00000034610 ENSMUST00000043368 1 1 3 83 4 108230068 108231326 TCTATGCTCAAGCAGACAG 59 108231373 108231391 ATTACTCGGACACGTTTCC 59 NA Mus musculus 50 Grip1 ENSMUSG00000034813 ENSMUST00000077871,ENSMUST00000041962,ENSMUST00000105262 3 3 5 94 10 119423460 119423478 TACCTCGAAGCCTCTACTC 59 119423536 119436821 GGAGGCTAAAGACAGTGAG 59 NA Mus musculus 50 Ncapd3 ENSMUSG00000035024 ENSMUST00000086198 3 1 2 87 9 26890941 26890961 AGCACAGATGAAGATCATCTC 59 26893569 26902311 TTTACGTTCCACTGTGGAG 59 NA Mus musculus 50 Ap2b1 ENSMUSG00000035152 ENSMUST00000018875,ENSMUST00000065692 3 2 2 83 11 83135507 83135527 CCTCTATCTGATGAACTATGC 57 83135571 83138026 GGATCTTCACAATCCTTCAC 58 NA Mus musculus 50 Ccdc98 ENSMUSG00000035234 ENSMUST00000055245,ENSMUST00000044535 3 2 2 84 5 101241213 101244191 ATGTCAGAAAGACTGTGGTG 59 101241148 101241166 CTGTGGAGTAACTGCTCTC 59 NA Mus musculus 50 Rsf1 ENSMUSG00000035623 ENSMUST00000042399,ENSMUST00000107153 2 2 2 81 7 104827587 104827606 TGATCTTGACAGTGATAGCA 58 104827650 104829144 AAACTCATCCTGAGATCCG 58 NA Mus musculus 50 Mlc1 ENSMUSG00000035805 ENSMUST00000109368,ENSMUST00000042594 3 2 2 80 15 88795921 88796383 CTAAAGTCCTACTCTGTGGT 58 88795860 88795878 TTCCTCTACGTTTAGAGCG 58 NA Mus musculus 50 Arhgap26 ENSMUSG00000036452 ENSMUST00000115575,ENSMUST00000097593,ENSMUST00000077134 1 3 6 82 18 39309765 39364948 GGGAACCTGTGTACAACTC 59 39387040 39387059 CCTTATTATGCTGAAGCCGA 59 NA Mus musculus 50 Trim3 ENSMUSG00000036989 ENSMUST00000106791,ENSMUST00000106792 3 2 4 184 7 112761132 112761153 GTAGTAACGGATTTCCATAACC 58 112753183 112759850 ATCCTCCAAACCTGTATGC 59 NA Mus musculus 50 Snf1lk2 ENSMUSG00000037112 ENSMUST00000041375,ENSMUST00000068484 1 2 2 97 9 50806671 50806690 TGGATGCAGTAAACCTTGAG 59 50803765 50806613 GGTCTCCATTACCTGATACAG 59 NA Mus musculus 50 Elf2 ENSMUSG00000037174 ENSMUST00000062009,ENSMUST00000108051 3 2 4 87 3 51070730 51070748 TAAGACCATTGAAGCTGCT 58 51068915 51070680 AGCATGGATAAACTCAGGAC 59 NA Mus musculus 50 Akap2 ENSMUSG00000038729 ENSMUST00000102905,ENSMUST00000102904,ENSMUST00000098066,ENSMUST00000030049 1 4 14 80 4 57660981 57701294 TAACATTCAGAGGCTGGAG 58 57701338 57701356 AGGATGATCTGCTCTTTGG 59 NA Mus musculus 50 Cpeb3 ENSMUSG00000039652 ENSMUST00000079754 2 1 2 99 19 37213565 37213584 TCGCTGATATAATGTGGAGG 59 37180295 37200830 TAGCTCCTGGTGTTAAGTG 58 NA Mus musculus 50 Timeless ENSMUSG00000039994 ENSMUST00000105244,ENSMUST00000055539,ENSMUST00000105245,ENSMUST00000105241 3 4 8 95 10 127687157 127687349 TTCTTGCATGCAGAATGGA 59 127687408 127687426 TCTTCACTTTCGTCCTCTG 58 NA Mus musculus 50 Cacna2d1 ENSMUSG00000040118 ENSMUST00000115281 2 1 3 107 5 15846532 15846551 TTGGTATTGCCAACCTACAG 59 15847826 15848517 CTTCAGGGTTTCTGAATCCT 59 NA Mus musculus 50 2610203E10Rik ENSMUSG00000040272 ENSMUST00000111246,ENSMUST00000068513,ENSMUST00000041593 2 3 3 87 2 93682080 93682098 CTTACTACGGAGCCATCAC 59 93681533 93682030 AATCCAGTTACCTTGCTGTC 59 NA Mus musculus 50 Cbln3 ENSMUSG00000040380 ENSMUST00000063871 1 1 1 72 14 56502339 56502357 GTCTACAGCTTCCGATTCC 59 56501996 56502014 TGTTCAGCATCAGACTCAC 59 NA DesignNoJunction Mus musculus 50 Bptf ENSMUSG00000040481 ENSMUST00000106762 1 1 4 198 11 106948196 106957032 AGGAAGACTCTAACAGGAC 57 106944005 106948036 CTGAAATCACCTATCTCTTCG 57 NA Mus musculus 50 Adam22 ENSMUSG00000040537 ENSMUST00000115386,ENSMUST00000088752 2 2 13 117 5 8092341 8092361 GACCTCGATCTAACTCAACTG 59 8082261 8087992 GACAGGGTCCTAAAGTATGG 59 NA Mus musculus 50 Wdr7 ENSMUSG00000040560 ENSMUST00000072726 1 1 2 110 18 63951534 63953886 TAGTAAATGAAGGCTGGAGC 59 63953959 63953977 ATCTTCGAGCTAGCATCTC 58 NA Mus musculus 50 Zfp598 ENSMUSG00000041130 ENSMUST00000047179,ENSMUST00000088395 3 2 2 90 17 24814122 24814364 CACCTCAAGATCTTCACCT 58 24814418 24814436 GGGATGTATCATCAGGGTC 58 NA Mus musculus 50 Mbp ENSMUSG00000041607 ENSMUST00000062446,ENSMUST00000114674,ENSMUST00000114673,ENSMUST00000080658 2 4 10 102 18 82731238 82742225 CATGTACAAGGACTCACAC 57 82742291 82742309 GAAGAAATGGACTACTGGG 57 NA Mus musculus 50 Myo3b ENSMUSG00000042064 ENSMUST00000060208,ENSMUST00000100044,ENSMUST00000112243 1 3 5 80 2 70094567 70094586 GGTGTAAGTTCTTCTGGAGG 59 70094629 70096032 CATCGTATAACACCGGTCC 59 NA Mus musculus 50 Dmtf1 ENSMUSG00000042508 ENSMUST00000095017,ENSMUST00000115353 2 2 5 81 5 9124519 9127966 TCATTTCCTGCTTCAACAG 57 9124456 9124475 ATGTTTGTAGTGTTCCACTG 58 NA Mus musculus 50 2410025L10Rik ENSMUSG00000043323 ENSMUST00000086653 1 1 3 196 5 110803530 110805035 GAAGATGAAGATGCAGCTG 58 110800583 110803129 GAAGATGAGAGTCCCAGTG 59 NA Nonspecific Mus musculus 50 Rhbdl2 ENSMUSG00000043333 ENSMUST00000053202,ENSMUST00000106204 1 2 2 103 4 123502157 123504091 TCTGATAGTTGCGTCAGAC 59 123506792 123506810 CAAATCCACCTGCAATGTG 59 NA Nonspecific Mus musculus 50 Klhl15 ENSMUSG00000043929 ENSMUST00000096369,ENSMUST00000113911,ENSMUST00000113915 1 3 5 91 X 91487327 91497765 GTTCATTTGTGATTCATGGC 57 91497819 91497837 TCATACAGTGCTCTGAACC 58 NA InUTR Mus musculus 50 Uqcrq ENSMUSG00000044894 ENSMUST00000109021 1 1 3 85 11 53244086 53244104 TATTTCAGCAAAGGCATCC 58 53242634 53242652 AGGTAGACCACTACAAACG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 E130009J12Rik ENSMUSG00000045036 ENSMUST00000086722,ENSMUST00000062161 3 2 2 80 17 65833767 65833786 TTTATATCGACTCTGTTGCG 57 65827798 65833725 AAATAGCCAATCTTCACCAG 57 NA Mus musculus 50 Zfp688 ENSMUSG00000045251 ENSMUST00000106300,ENSMUST00000051352 3 2 2 73 7 134562939 134562957 CAAACACCGATATTCAGGC 58 134562884 134562902 AGATGGATAGGTAAACCGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp629 ENSMUSG00000045639 ENSMUST00000058038 2 1 2 128 7 134756281 134757478 TACTTGTCCTAGAGACCCT 58 134756067 134756189 CTTCCAGCACCTCTATGAG 59 NA InUTR Mus musculus 50 Eif4g1 ENSMUSG00000045983 ENSMUST00000115463,ENSMUST00000044783,ENSMUST00000073840,ENSMUST00000115457,ENSMUST00000115461,ENSMUST00000115460 1 6 6 80 16 20686991 20687226 CCAGTACTATCAAGGGCTG 59 20687269 20687288 AGGTAAAGCCATACATGAGG 59 NA Mus musculus 50 4930533K18Rik ENSMUSG00000047692 ENSMUST00000058942 3 1 1 91 10 70334922 70334940 TCTCAAGCCCAACTTAACC 59 70334995 70337988 TTTCTGTGGGAGAAGTGTG 59 NA Mus musculus 50 Rgmb ENSMUSG00000048027 ENSMUST00000057264 3 1 1 147 17 15944761 15957647 CTGCTACAAACAAGGTCAC 58 15944632 15944650 ATGTGAAGACTCTTCACGT 58 NA Mus musculus 50 Cdk5r1 ENSMUSG00000048895 ENSMUST00000053413,ENSMUST00000116355 2 2 2 60 11 80291799 80291819 AGTTATCAACCTCATGAGCTC 59 80291841 80291859 TGTGAAATAGTGTGGGTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tada3l ENSMUSG00000048930 ENSMUST00000043333,ENSMUST00000032410 2 2 4 78 6 113320982 113321000 ATGTCTGGGAAAGAGTCAG 58 113320391 113320940 TATGTGGCACACTGAAAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ogfr ENSMUSG00000049401 ENSMUST00000029087,ENSMUST00000078560,ENSMUST00000098985 2 3 3 82 2 180325693 180325711 CTAGGATGACAAGGTACCG 58 180325757 180326336 TTGATCTGTCAAATCCGGG 59 NA Mus musculus 50 Grm5 ENSMUSG00000049583 ENSMUST00000061910 3 1 2 99 7 95223554 95223572 AGATGGCAAGTCATCATCC 59 95223634 95264715 CCTGTCTTTGTACCTTAGGG 59 NA Mus musculus 50 5730508B09Rik ENSMUSG00000050549 ENSMUST00000057198 2 1 1 60 3 127573780 127573798 TTTGGAGAACGAATTGTGG 58 127573738 127573756 GGAACCATAGCATAAGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000099981,ENSMUST00000070199 3 2 14 84 2 76674645 76674666 CCAAACAGTTGTTACAGAAGAG 59 76674462 76674602 GGTTGTTTCAGACTCTTTGAG 59 NA Mus musculus 50 Zfp217 ENSMUSG00000052056 ENSMUST00000109155,ENSMUST00000063710 3 2 2 80 2 169941642 169941660 CATCTCAGAACGCATACAG 57 169941011 169941029 CCTCAGAGATGTCTTCTGG 58 NA DesignNoJunction Mus musculus 50 Bre ENSMUSG00000052139 ENSMUST00000080598,ENSMUST00000063813,ENSMUST00000071531,ENSMUST00000114507,ENSMUST00000078891,ENSMUST00000114511 2 6 7 105 5 32359943 32359961 CACTTTACCAACAGTGGAC 58 32360029 32386964 TGAAATAAGCCTTTGCTCTC 58 NA Mus musculus 50 Ezr ENSMUSG00000052397 ENSMUST00000064234,ENSMUST00000085833,ENSMUST00000097429 2 3 3 84 17 6951662 6951681 AGTGAGATCAGGAACATCTC 58 6947187 6951615 CGTAGAACACAAAGTCAGG 58 NA Mus musculus 50 Rxfp2 ENSMUSG00000053368 ENSMUST00000065745,ENSMUST00000110496 3 2 2 80 5 150862692 150866257 AACAACTTCAGTCTCTAGACC 59 150866299 150866317 AAAGGTTCTTCATTGGCTG 58 NA Mus musculus 50 Tcf4 ENSMUSG00000053477 ENSMUST00000066717,ENSMUST00000114985,ENSMUST00000078486,ENSMUST00000114978 1 4 7 99 18 69837693 69837711 ATGAGAACCTGCAAGACAC 59 69837771 69841231 TCGTTATTGCTAGATCTTGACC 59 NA Mus musculus 50 Srcap ENSMUSG00000053877 ENSMUST00000084563 1 1 3 81 7 134696266 134696384 TCCACATCTATAGGCTTATCAG 58 134696425 134696444 TCTCCCAACATTCTCTTCTG 59 NA Mus musculus 50 Krt15 ENSMUSG00000054146 ENSMUST00000107411 3 1 2 80 11 99993439 99993919 CAGAGAAGTATCCCTGGGA 59 99993377 99993395 TCCTCCACACTGATATGGA 59 NA Mus musculus 50 Oscar ENSMUSG00000054594 ENSMUST00000108645,ENSMUST00000039507 1 2 2 81 7 3562505 3562682 TCAGTTTCGAAGGTTCTGG 59 3562442 3562460 CAGATGAGGACCATTCCTG 59 NA Mus musculus 50 Grik2 ENSMUSG00000056073 ENSMUST00000105483,ENSMUST00000095710 3 2 6 97 10 49243558 49243576 AAGTCTCCTCCATCATCGA 59 49215958 49243499 CAATCTGTCCGTCATAAATCC 58 NA Mus musculus 50 Npm1 ENSMUSG00000057113 ENSMUST00000075641,ENSMUST00000109354,ENSMUST00000101375 2 3 4 74 11 33056094 33056671 GATCAAAGGGTCAAGAGTC 57 33056038 33056057 CTTCTACAGAACTAGGTCCT 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Atpbd4 ENSMUSG00000057147 ENSMUST00000028640 3 1 3 130 2 114361276 114361294 AACCCTGGTTGAAATGGAG 59 114344020 114345457 TGACGACACTTTCTCTTCC 59 NA Mus musculus 50 Prdm2 ENSMUSG00000057637 ENSMUST00000105778,ENSMUST00000075322 2 2 3 83 4 142701675 142721626 CTGAAGGACTTGAGCTACAG 59 142701611 142701629 CTTTCTGCATTGTCTGGTG 59 NA Mus musculus 50 Eml1 ENSMUSG00000058070 ENSMUST00000054955,ENSMUST00000109860 3 2 3 84 12 109740617 109744695 CATTCAGTCCAGAAGAAGG 57 109744743 109744761 GAATCCACTTGGTCTTTGG 58 NA Mus musculus 50 Tnip2 ENSMUSG00000059866 ENSMUST00000030991 3 1 2 88 5 34846239 34846257 CAACATCTGGCCAAATGTC 59 34844153 34846188 CAGATCCATCTTACCTCCTC 58 NA Mus musculus 50 Unc5c ENSMUSG00000059921 ENSMUST00000106236,ENSMUST00000075282 1 2 3 80 3 141341165 141377620 AACCTCTGGTCTAATTGTGAG 59 141377661 141377680 TAATCTTCAGGCCCAAACAG 59 NA Mus musculus 50 Zfp462 ENSMUSG00000060206 ENSMUST00000098070 2 1 3 80 4 55020643 55021136 AGGATTTACCAGGTCAAAGTG 59 55021176 55021196 TATGCTGACCGTAATATCCTG 59 NA Mus musculus 50 Hist4h4 ENSMUSG00000060832 ENSMUST00000082036,ENSMUST00000102984 1 2 2 60 13 21827629 21827648 TCAGTTGTGTAGAATGAGGT 58 21827671 21827689 TTTATTGCATCCGAGACAG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Hist4h4 ENSMUSG00000060981 ENSMUST00000078578,ENSMUST00000102972 2 2 2 97 13 23622926 23622944 ATAAGTAATGTGCCTGTGC 57 23623005 23623023 CTTTGCCAAGACCTTTACC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zfp143 ENSMUSG00000061079 ENSMUST00000084727 2 1 2 80 7 117215708 117217592 CCTCGAAAGACAGTTATGAC 57 117217635 117217653 CTGCATGGTGGATATAAGC 58 NA Mus musculus 50 Pclo ENSMUSG00000061601 ENSMUST00000071768 2 1 3 80 5 14680010 14680029 ACAGGTCAGTATGATGTAGC 58 14680071 14680094 GGGATACTGTTCTGAAACGA 59 NA Mus musculus 50 Dlgap4 ENSMUSG00000061689 ENSMUST00000000094,ENSMUST00000070782,ENSMUST00000109568,ENSMUST00000109567 2 4 6 85 2 156536990 156571581 GCTTCCAAGTTCATCATGC 59 156571630 156571648 CTGAGATGAACGGTTTCGA 59 NA Mus musculus 50 Nsl1 ENSMUSG00000062510 ENSMUST00000078259 1 1 2 122 1 192893947 192893966 GAAGGATCCTTGAGAGTGTC 59 192895108 192904382 CTTCTACACGAGAAGCTGG 59 NA Mus musculus 50 Actg1 ENSMUSG00000062825 ENSMUST00000062147,ENSMUST00000089616,ENSMUST00000071555,ENSMUST00000106215,ENSMUST00000106216 3 5 5 114 11 120207836 120207960 GAAGATTAAGATCATTGCTCCC 58 120207743 120207761 ATCATACTCCTGCTTGCTG 59 NA Nonspecific Mus musculus 50 Nrg1 ENSMUSG00000062991 ENSMUST00000073884 3 1 2 200 8 32959895 33028010 TTCCACATCTACATCCACG 59 32941691 32948150 CCAAGATGCTTGTAGAAGC 58 NA Mus musculus 50 Kcnma1 ENSMUSG00000063142 ENSMUST00000112423,ENSMUST00000065788,ENSMUST00000100831 3 3 4 106 14 24282324 24282342 TCCTTCCCTACTGTTTGTG 58 24261284 24270824 CCAGGGTTAATTAATATTCGGC 59 NA Mus musculus 50 Krr1 ENSMUSG00000063334 ENSMUST00000099281 1 1 2 80 10 111420103 111421604 GCCAAATAAACTTCTACCGA 57 111421647 111421665 CAGTTTCTTCGTCTTTGCT 58 NA Mus musculus 50 Gm1631 ENSMUSG00000064263 ENSMUST00000112111,ENSMUST00000079720 3 2 2 81 2 71561545 71568418 TCTCTAAAGGAATGTGAGAGG 58 71568461 71568479 AGTGATTCTCCAACACCAG 59 NA Mus musculus 50 Wdr35 ENSMUSG00000066643 ENSMUST00000085745 2 1 2 80 12 8996830 8996849 CATTTCTATCACCACGTGTG 58 8996891 9002459 ATTTCATTCTCCTCCTGAGG 58 NA Mus musculus 50 Klra3 ENSMUSG00000067591 ENSMUST00000111998,ENSMUST00000088017 3 2 2 106 6 130283224 130283242 CAAGCAATGAAACTCTGGA 57 130280263 130283155 GTATTTAACACCTCTGCCTG 58 NA Mus musculus 50 Klra7 ENSMUSG00000067599 ENSMUST00000112013,ENSMUST00000049304,ENSMUST00000112012,ENSMUST00000088011,ENSMUST00000032286 1 5 5 80 6 130176509 130176528 TGGAGTGGATGTAAACAGAC 59 130174198 130176468 AAGGAACTTCAGTTCATCCTC 59 NA Nonspecific Mus musculus 50 Ankrd23 ENSMUSG00000067653 ENSMUST00000054665,ENSMUST00000045120 2 2 2 79 1 36589152 36589170 GCTGCTATAGAAGTACGGG 59 36589000 36589018 TTGAGAATGTCCAGGTGTC 59 NA DesignNoJunction Mus musculus 50 Tcl1b3 ENSMUSG00000068940 ENSMUST00000090991,ENSMUST00000090990 3 2 2 60 12 106431782 106432660 CTGGATCATTCCCAGATGG 59 106432682 106432702 CCTCGCATATTACTATGTCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Prl2b1 ENSMUSG00000069258 ENSMUST00000102954 3 1 2 138 13 27475498 27476992 TTCAAAGCATGATTGGAGAG 58 27475379 27475397 TTTCGAGAATCTCTGAGCA 58 NA Mus musculus 50 Rnf213 ENSMUSG00000070327 ENSMUST00000093902 1 1 2 80 11 119333116 119334690 GCTATCAGAAACAATGAGGAC 58 119334731 119334750 AGATACTTCTGCTACACCAC 58 NA Mus musculus 50 9030025P20Rik ENSMUSG00000073455 ENSMUST00000097397 3 1 3 92 17 15150643 15150661 TACTGGTTGGGAAAGAGTG 58 15150714 15151234 CTAGAATATTCACAGCATGTCC 58 NA Nonspecific Mus musculus 50 2610002J02Rik ENSMUSG00000073684 ENSMUST00000105627,ENSMUST00000097747,ENSMUST00000105628,ENSMUST00000105626 2 4 4 122 4 154625046 154625065 TAAATTCTGGTCGAACTCCC 59 154630248 154630266 TATCCACATCTAGCTGGGT 59 NA DesignNoJunction Mus musculus 50 OTTMUSG00000012686 ENSMUSG00000075425 ENSMUST00000113810,ENSMUST00000113809,ENSMUST00000113808,ENSMUST00000100229 3 4 4 80 2 29618998 29619017 TCTCATTAGTCGGGTATCAC 58 29619305 29619423 GATGAGAAAGTCTTGGTCTC 57 NA Mus musculus 50 Sult2a1 ENSMUSG00000078798 ENSMUST00000108522 1 1 1 68 7 14421332 14421350 TCCATCTCTTCTCCAAGTC 57 14418025 14418043 CTCTGGGATTTCTCACGAG 59 NA DesignNoJunction Mus musculus 50 A2BHX7_MOUSE ENSMUSG00000078876 ENSMUST00000108978 1 1 1 60 2 176619677 176619695 AGATGTGATGCTAGAGACC 58 176619911 176619930 ATGTTCTTCCCAAATGTACC 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A2APR4_MOUSE ENSMUSG00000079326 ENSMUST00000112339 2 1 1 60 X 157738855 157738874 GGTTCTGATATTGAGGACAC 57 157738896 157738915 CTTCAAGTTCAGAGTCTACG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rab7 ENSMUSG00000079477 ENSMUST00000113598,ENSMUST00000113597,ENSMUST00000113596,ENSMUST00000113600,ENSMUST00000095048 2 5 5 61 6 87950518 87954176 GCCCTTAAACAGGAAACAG 58 87950475 87950493 TCCAGTTTGATGGGTTCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 4933440N22Rik ENSMUSG00000042087 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Gmpr ENSMUSG00000000253 ENSMUST00000000260 3 1 1 94 13 45609803 45609822 CAAACCTACTCAGGGATTCC 59 45609879 45612381 GTAAACATGGCATGCTGTG 59 NA Mus musculus 50 Arvcf ENSMUSG00000000325 ENSMUST00000115613,ENSMUST00000115618,ENSMUST00000090103,ENSMUST00000115614,ENSMUST00000115612,ENSMUST00000115610,ENSMUST00000115611 3 7 7 112 16 18397107 18397125 TACTGGAGGAGACAGTGAC 59 18397198 18397398 CTTAGTGACCTTAGTCTCAGTC 59 NA Mus musculus 50 Myf5 ENSMUSG00000000435 ENSMUST00000000445 1 1 1 117 10 106921257 106921710 TATCAAATGCATGTGCTGC 59 106921158 106921176 GAAGCTGTGTCCTGAAGAG 59 NA Mus musculus 50 Dpp9 ENSMUSG00000001229 ENSMUST00000038794,ENSMUST00000113056 3 2 2 122 17 56345040 56345133 AGAATGGCTTTATGGTGTC 57 56344936 56344954 CACTGTTGTTGATGAAGGA 57 NA Mus musculus 50 Fbxo9 ENSMUSG00000001366 ENSMUST00000001402,ENSMUST00000085311 2 2 2 80 9 77943055 77943682 CATATCAGTCCTGCCTATGG 59 77942994 77943012 TCTAACGATCTGAGGTCCA 59 NA Mus musculus 50 Tspan33 ENSMUSG00000001763 ENSMUST00000115250,ENSMUST00000046750 3 2 2 85 6 29663459 29663480 GATCATCAACAATGCTATCGTG 59 29663526 29666714 AGCAGCTGAACTTCTTCTG 59 NA Mus musculus 50 Ddr1 ENSMUSG00000003534 ENSMUST00000003628,ENSMUST00000097333 3 2 2 97 17 35822005 35822024 GTGACTTCCCTATCAGTGTG 59 35821246 35821945 CAGGAAATCATTCCTGGCA 59 NA Mus musculus 50 Ier3 ENSMUSG00000003541 ENSMUST00000003635 1 1 1 192 17 35959028 35959046 GTCCTCTTTCTCCTGTTCG 59 35959202 35959220 TAAGATCCAGCGCATAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mef2c ENSMUSG00000005583 ENSMUST00000109560,ENSMUST00000005722 2 2 3 122 13 83795229 83795830 ACATATGGTACTGAGTACTCTC 58 83795913 83795931 CATGTTATGTAGGTGCTGC 58 NA Mus musculus 50 Mpl ENSMUSG00000006389 ENSMUST00000102671,ENSMUST00000006556,ENSMUST00000106375 1 3 3 98 4 118116275 118116629 TAAGTCCTTCTAAGGCCAC 58 118116195 118116213 GAGGTAAAGGAGTGCTCTC 59 NA Mus musculus 50 Mgst1 ENSMUSG00000008540 ENSMUST00000008684 2 1 1 83 6 138096255 138096274 CTTTACCTCCTATGCAACGA 59 138096319 138099290 ACCTTGTTGGTTATCCTCTG 59 NA DesignNoJunction Mus musculus 50 Fxyd5 ENSMUSG00000009687 ENSMUST00000009831 1 1 1 80 7 31820291 31820413 TCTACTACGATGATACTACCC 57 31820231 31820250 TGAGAATGATAATTCCCGTG 57 NA Mus musculus 50 Mett10d ENSMUSG00000010554 ENSMUST00000010698,ENSMUST00000092912,ENSMUST00000100858 1 3 3 80 11 74597747 74601064 GGAATTGACATAGGTACTGGG 59 74601106 74601124 TGTTGCCAGGAAATACCAG 59 NA Mus musculus 50 Adam19 ENSMUSG00000011256 ENSMUST00000109251 2 1 3 132 11 45874744 45874762 CATCCAGAGGATGGTTCAC 59 45958309 45958328 ATTGCCTCTGTCTCTTTCAC 59 NA DesignNoJunction, InUTR Mus musculus 50 Tctex1d2 ENSMUSG00000014075 ENSMUST00000014220 2 1 2 115 16 32425387 32426952 AAGGAGTATTCATGGCTGC 59 32428864 32428883 GTAGAAACACCCAAATGCTG 59 NA Mus musculus 50 Pdzd11 ENSMUSG00000015668 ENSMUST00000015812,ENSMUST00000059099 2 2 2 84 X 97819290 97819880 ATCTCCAAGGTGATTCCAG 58 97819224 97819242 AATCCACATCATTCACAGC 58 NA Mus musculus 50 2700038C09Rik ENSMUSG00000016344 ENSMUST00000016488,ENSMUST00000108841,ENSMUST00000116367 1 3 3 169 2 180922426 180922516 CATGACTACTATCGGCGAC 59 180922766 180922784 GTAGTCATGAACGGGAGTG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Gdap1l1 ENSMUSG00000017943 ENSMUST00000018087,ENSMUST00000109421 3 2 3 93 2 163273400 163276311 AGATCCGCAGACATTTAGC 59 163276367 163276386 TGTTTAGAAAGGTAGGGCTC 59 NA Mus musculus 50 Stk4 ENSMUSG00000018209 ENSMUST00000109382,ENSMUST00000018353,ENSMUST00000088291 1 3 3 80 2 163943852 163977419 ACTATGAGTTTCTCAAGAGCTG 59 163977460 163977478 TTTCCTGTTCCATCATGGG 59 NA Mus musculus 50 Cldn7 ENSMUSG00000018569 ENSMUST00000108597,ENSMUST00000108596,ENSMUST00000018713 3 3 4 134 11 69780573 69780591 ATAGCTATGACTGGAGGCA 59 69780800 69781069 TCCAAACTCGTACTTAACGT 58 NA Mus musculus 50 Copz2 ENSMUSG00000018672 ENSMUST00000107650 2 1 3 74 11 96712022 96712040 CTTAGATAATGACGGGCGA 58 96712078 96712096 CATATGGCACTGTCTTCGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gyg ENSMUSG00000019528 ENSMUST00000019672 2 1 1 81 3 20022738 20025152 CTAATGATGGAACATGTCTCAG 58 20022678 20022696 AGGACATAGAAGGTTGTGG 58 NA Mus musculus 50 Egfr ENSMUSG00000020122 ENSMUST00000020329,ENSMUST00000102884,ENSMUST00000020325 1 3 3 80 11 16759039 16760078 TCCTTCTTAAAGACCATCCA 57 16760121 16760139 GTTCTCCAAAGGGATTCTC 57 NA Mus musculus 50 Apc2 ENSMUSG00000020135 ENSMUST00000020349 2 1 1 60 10 79764963 79765068 CAACTGAAAGCTCTTCAGAC 58 79765091 79765109 CTGGAGCATGAAACTTGAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Glipr1l1 ENSMUSG00000020213 ENSMUST00000073617 1 1 1 82 10 111509327 111509345 GTGCAGTTTCAAATTGTCC 57 111509391 111513173 TATAAAGTTTCCTGCTGGC 57 NA Mus musculus 50 Rnf130 ENSMUSG00000020376 ENSMUST00000054684,ENSMUST00000102776 1 2 2 80 11 49899303 49900887 AAGGGCGATAAGGAAACAG 59 49900931 49900949 CCGAACAACATCATTCTGC 59 NA Mus musculus 50 Cdkn2aipnl ENSMUSG00000020392 ENSMUST00000102763 2 1 1 107 11 51783652 51783671 TAAAGACCTTCTGGACAAGG 58 51783739 51789415 CCTTAGCTTTGATGCTTTCTC 59 NA InUTR Mus musculus 50 Vdac1 ENSMUSG00000020402 ENSMUST00000102758,ENSMUST00000020673,ENSMUST00000109065 2 3 3 106 11 52188460 52189904 GAATGGATTGGAATTTACCAGC 59 52189971 52189989 TAAACGTCAGCCCATACTC 59 NA Mus musculus 50 Mmp28 ENSMUSG00000020682 ENSMUST00000108137,ENSMUST00000103209,ENSMUST00000021020,ENSMUST00000100710 2 4 4 105 11 83264966 83264984 GATACTGACAGTCATGCCA 59 83261238 83264897 ATTTGTTACCTGGCTTTGC 58 NA Mus musculus 50 Sel1l ENSMUSG00000020964 ENSMUST00000021347 3 1 1 80 12 93054259 93054277 GCTTTCTATAACCTCGCAC 58 93053571 93054215 CTTAAACAACTCCACTGCA 57 NA Mus musculus 50 Fos ENSMUSG00000021250 ENSMUST00000021674 3 1 1 111 12 86816128 86816551 GTAGAGCAGCTATCTCCTG 58 86816626 86816644 GGAGTGTATCTGTCAGCTC 59 NA Mus musculus 50 Vash1 ENSMUSG00000021256 ENSMUST00000021681 3 1 1 80 12 88029229 88029862 CTGGGAATTTACCTCACCA 58 88029903 88029924 GTAGTTCCCTGAGAAATAGGTC 59 NA Mus musculus 50 Pcbd2 ENSMUSG00000021496 ENSMUST00000021958 3 1 1 85 13 55834417 55876735 AATTTCAATCAGGCGTTTGG 59 55876783 55876801 TAGACGTTGAACCATTCCG 59 NA Mus musculus 50 Mterfd1 ENSMUSG00000021519 ENSMUST00000021991 2 1 1 87 13 67023750 67023768 GAAGATAACCAGCTGGGAC 59 67018099 67023703 GATAAGCTACTCTGGTCTTAAGG 59 NA Mus musculus 50 Slc30a5 ENSMUSG00000021629 ENSMUST00000067246,ENSMUST00000022129 2 2 2 86 13 101573409 101573828 ATTGTACAGCAGGTTACAGG 59 101573342 101573360 ATGCTGAAAGTATGCCTCC 59 NA Mus musculus 50 Slc4a7 ENSMUSG00000021733 ENSMUST00000057015,ENSMUST00000090583,ENSMUST00000074344 1 3 3 80 14 15569957 15569975 TTCACAGAGATGGATGAGC 59 15570019 15570713 TTCAAATTTCAGCCACCTG 58 NA Mus musculus 50 2310021P13Rik ENSMUSG00000021819 ENSMUST00000022358,ENSMUST00000112490 3 2 2 82 14 21531511 21531529 GATGAGTCAACACTCACTG 57 21531574 21532206 TTTACATCACTGAAGACCAC 57 NA Mus musculus 50 Tnfrsf10b ENSMUSG00000022074 ENSMUST00000022663 1 1 1 80 14 70173223 70173241 AGGGTATTGACTACACCAG 57 70173282 70174901 CGACTTTATCTTCCTTACAGAC 58 NA Mus musculus 50 Gpr172b ENSMUSG00000022560 ENSMUST00000023220 2 1 1 92 15 76371175 76371193 TTAAGTCCCTGTCCTCCTC 59 76371367 76371385 GATATACGAGAACGTGCCT 58 NA DesignNoJunction Mus musculus 50 Epb4.2 ENSMUSG00000023216 ENSMUST00000102490,ENSMUST00000023987 2 2 2 80 2 120855750 120855768 AGAACGGCTTTATCTACCT 57 120854877 120855706 TGACGTCTTTCTCAAACTG 57 NA Mus musculus 50 Twf2 ENSMUSG00000023277 ENSMUST00000024047 3 1 1 96 9 106114595 106114614 GAAGATGCTATATGCAGCCA 59 106114672 106115071 GAGGTCATCCTTTACTGTCC 59 NA Mus musculus 50 Pgc ENSMUSG00000023987 ENSMUST00000097312,ENSMUST00000024782 3 2 2 81 17 47865783 47865801 GCCAGAAATACCACTTTGG 58 47865846 47866214 CCATAGTAGGAAGCATCCA 58 NA Mus musculus 50 Ppil1 ENSMUSG00000024007 ENSMUST00000024802 2 1 1 109 17 29398702 29398721 AAGGACTTCATGATCCAAGG 59 29388670 29389212 CCAGTGAACTTCAGGTCTG 59 NA DesignNoJunction Mus musculus 50 Glo1 ENSMUSG00000024026 ENSMUST00000024823 1 1 1 86 17 30733399 30734758 GTGGATTTGGTCACATTGG 59 30733331 30733350 TCTTCACAAACTTGACACCT 59 NA Nonspecific Mus musculus 50 Glo1 ENSMUSG00000024026 ENSMUST00000024823 2 1 1 60 17 30734780 30734798 GACGAGACTCAGAGTTACC 58 30733397 30734756 TCCCAATGTGACCAAATCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Clip4 ENSMUSG00000024059 ENSMUST00000024854,ENSMUST00000112611 1 2 2 80 17 72152944 72152962 TTGCAGCACATAACTTGTG 58 72153005 72155854 CTTTGTCATTCCTAAAGGCA 58 NA Mus musculus 50 AW548124 ENSMUSG00000024247 ENSMUST00000025094 1 1 1 115 17 83619483 83620310 AGGATCGATTCCGAATCTG 58 83620389 83620407 GTTCACTAGCACAAACTGC 59 NA Mus musculus 50 Gypc ENSMUSG00000024380 ENSMUST00000025238 2 1 1 71 18 32692388 32692406 GAGATTGCCATCATTGCAG 59 32689803 32689821 AAGCATGAGAAAGAGGAGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Rcl1 ENSMUSG00000024785 ENSMUST00000064393 3 1 1 81 19 29208921 29208939 TAGTTCTGCTGCTCATGAC 59 29208982 29217640 AATTCTATCGTGTAGGGTGAG 59 NA Mus musculus 50 Cst6 ENSMUSG00000024846 ENSMUST00000025764 3 1 1 106 19 5348431 5348449 GAGAACACATGGACCTCAC 59 5347996 5348015 CTGAGTAGTGTTCTTCCAGG 59 NA DesignNoJunction Mus musculus 50 Pacs1 ENSMUSG00000024855 ENSMUST00000025786 3 1 1 80 19 5160764 5160783 AATGAGATCATCCTTCCAGC 59 5160079 5160721 AAGGAAATGAGGGTACTGG 58 NA Mus musculus 50 Aspscr1 ENSMUSG00000025142 ENSMUST00000026135,ENSMUST00000106159,ENSMUST00000106158,ENSMUST00000103016,ENSMUST00000106160 1 5 5 109 11 120548004 120549849 ATGAGGAATGAGGTGACTG 58 120550230 120550249 GTGTCACACTGCTTTATGAC 59 NA Mus musculus 50 Tyms ENSMUSG00000025747 ENSMUST00000026846 1 1 1 82 5 30395173 30398185 TGGTTTATCAAGGGATCCAC 59 30395110 30395128 AAATCTCGGGATCCATTGG 59 NA Mus musculus 50 2310038H17Rik ENSMUSG00000025956 ENSMUST00000053469,ENSMUST00000114079 1 2 2 115 1 64661750 64661768 ATGTATCTGGAGATGGGTG 58 64654693 64654711 GTGATAGTCACCTGAGCAC 59 NA DesignNoJunction Mus musculus 50 Il18rap ENSMUSG00000026068 ENSMUST00000027237 2 1 1 80 1 40599910 40599929 GGTACTGGATTGAAGTTGTC 58 40599970 40604629 CATCGAATTCCTTCTTATCCC 58 NA Mus musculus 50 Cd55 ENSMUSG00000026399 ENSMUST00000027650 2 1 1 82 1 132344953 132344971 CCTGTTACCAAGACAACAG 57 132344201 132344907 ATATAACGGTCACCACCTG 58 NA Mus musculus 50 Spna1 ENSMUSG00000026532 ENSMUST00000027817 2 1 1 80 1 176135526 176137172 GTTCCATCAACAAGGACTG 58 176137215 176137234 CCAGTTTCCTGACATAAACC 58 NA Mus musculus 50 Scyl3 ENSMUSG00000026584 ENSMUST00000027876 1 1 1 80 1 165863755 165863773 AGATGGGAAATGTGCTTCC 59 165863817 165864773 GTCTTTAAGTGCTTGGCAG 59 NA Mus musculus 50 Lmx1a ENSMUSG00000026686 ENSMUST00000111377,ENSMUST00000028003 3 2 2 117 1 169760821 169760839 TTGAAGTATCCTCCAAGCC 58 169763018 169771044 AGCTTCTTCATCTTGGCTC 59 NA Mus musculus 50 Acvr1c ENSMUSG00000026834 ENSMUST00000028178,ENSMUST00000112608,ENSMUST00000112607,ENSMUST00000100085 3 4 4 83 2 58132770 58134015 AGTTGGAGGAGTTGTTGAG 59 58132705 58132726 ACCTTCCTCATTTCTTCTATCG 59 NA Mus musculus 50 Gpsm1 ENSMUSG00000026930 ENSMUST00000066936,ENSMUST00000078616,ENSMUST00000114135,ENSMUST00000066914,ENSMUST00000066889 1 5 6 86 2 26179550 26179949 GAGAGGAACCTGTCTTTGG 59 26179999 26180017 TAGGTAGTGGGTGTTACCC 59 NA DesignNoJunction Mus musculus 50 D230010M03Rik ENSMUSG00000027243 ENSMUST00000111323 3 1 3 63 2 91552983 91553001 CAGTTTGAAACTGGGATGC 59 91558805 91558823 ACAACAATGCTTGTGTAGC 58 NA DesignNoJunction Mus musculus 50 Rpusd2 ENSMUSG00000027324 ENSMUST00000028796 3 1 1 156 2 118862810 118862828 ATCTTCATCCTAGGCAAGG 58 118862948 118863791 CATACTCCTTCTCCAGCTG 59 NA Mus musculus 50 5830467P10Rik ENSMUSG00000027356 ENSMUST00000038280 1 1 1 80 2 132758840 132758858 CATTCAGGAGGATGAGCAG 59 132751517 132758798 CTGACAGCGTCATATTTAGGA 59 NA Mus musculus 50 2310007D09Rik ENSMUSG00000027654 ENSMUST00000029183 1 1 1 60 2 158605715 158605735 CATGGATCTGAGAGTTCATCC 59 158608876 158608895 TCCTGTAATTGTCCGAACTG 59 NA DesignNoJunction Mus musculus 50 Gstm4 ENSMUSG00000027890 ENSMUST00000116285,ENSMUST00000029489,ENSMUST00000106670 3 3 3 80 3 107845100 107845118 TTATATTCGAACCCACGTG 57 107844228 107845056 AGATCCTCTTCAGTACCTC 57 NA Mus musculus 50 Lce1m ENSMUSG00000027912 ENSMUST00000029520 2 1 1 63 3 92822962 92822981 AATCCATTACTCGCTGAGTG 59 92822541 92822559 GACAGGACATCTCCAAAGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Cryz ENSMUSG00000028199 ENSMUST00000029850 2 1 1 80 3 154284668 154284686 AGATAAACCCAAGGGACAC 58 154284730 154285070 GAAATTCCTCCTTGGTGGA 59 NA Mus musculus 50 Map3k7 ENSMUSG00000028284 ENSMUST00000037607,ENSMUST00000080933,ENSMUST00000108184,ENSMUST00000108183 3 4 4 80 4 32065443 32066721 TGTATAATGTGCTGCATGGT 59 32066764 32066782 GGGAACACTGTAAACACCA 59 NA Mus musculus 50 Wdr31 ENSMUSG00000028391 ENSMUST00000107451 1 1 3 62 4 62116885 62116903 TATGATTGCTACCTCTGCA 58 62116500 62116859 AAATCTCCAGTATCCTGGT 57 NA DesignNoJunction Mus musculus 50 1110017D15Rik ENSMUSG00000028441 ENSMUST00000095126,ENSMUST00000030152 2 2 2 82 4 41458517 41458538 GGACTACACCTATAAGAGTTCC 59 41455654 41458476 ATTTGTCCTCTTCATCTGGAG 59 NA Mus musculus 50 Glipr2 ENSMUSG00000028480 ENSMUST00000107855 3 1 2 105 4 43970640 43983384 AATCAGGAAAGGATGTGGC 59 43990337 43990356 CATACCATGGCTGTAAAGTG 58 NA DesignNoJunction Mus musculus 50 Hook1 ENSMUSG00000028572 ENSMUST00000107083,ENSMUST00000030306 1 2 2 82 4 95656329 95656347 TGATGTAGCTTGGTTCAGC 59 95656390 95658849 GGTTACTAGCCTTTATTCTCCA 59 NA Mus musculus 50 Hook1 ENSMUSG00000028572 ENSMUST00000107083,ENSMUST00000030306 3 2 2 100 4 95662512 95663457 CAATTCAGGAGCTGATGAG 57 95665394 95665412 CTGAAGCTCTTCTAAAGCC 57 NA Mus musculus 50 Tcfap2c ENSMUSG00000028640 ENSMUST00000030391,ENSMUST00000099058 1 2 2 91 2 172379050 172379068 AAAGTAACTGTGGCTGAGG 59 172379123 172379549 GACTTTGCTCTTCTGAGCA 59 NA Mus musculus 50 Nudc ENSMUSG00000028851 ENSMUST00000030665 3 1 1 80 4 133090196 133090214 AATGAAGTCAAGGTGGAGG 59 133089396 133090155 CTTATTGATCTTCTCCAGATGC 58 NA Nonspecific Mus musculus 50 Kcnab2 ENSMUSG00000028931 ENSMUST00000030768,ENSMUST00000105648 2 2 2 81 4 151767230 151767865 ATTGGAGCAATACAGGTCC 59 151767167 151767185 TGTAGGGTTTATTGCCCAG 59 NA Mus musculus 50 Tas1r1 ENSMUSG00000028950 ENSMUST00000030792 1 1 1 108 4 151406096 151406114 TATGAGGCTGTGTATGCTG 59 151405627 151406024 AGATCTGCTGAAGAAGCTG 59 NA Mus musculus 50 Clcn6 ENSMUSG00000029016 ENSMUST00000105711,ENSMUST00000030879,ENSMUST00000094479 2 3 3 81 4 147391011 147391029 ATGGTGTTAGGAGAATGCC 59 147388724 147390966 CTTCTGATGTGACCTGGAG 59 NA Mus musculus 50 Sfrs9 ENSMUSG00000029538 ENSMUST00000031513 3 1 1 128 5 115782186 115782205 TCTGTTATGCAGACGTACAG 59 115782296 115782600 TGTAGGAAGTCTCACCCTC 59 NA Mus musculus 50 Tmem168 ENSMUSG00000029569 ENSMUST00000031554 3 1 1 127 6 13541363 13541382 TTCCAAACTGAAAGCTTTCC 58 13533320 13541273 GAAGTATGTCTCCACCTGC 59 NA Mus musculus 50 Wipi2 ENSMUSG00000029578 ENSMUST00000036872 2 1 1 279 5 143140436 143141390 CTAACCACAATTCAGAAGATCC 58 143142193 143142819 TGTAGGCTTCTAAGTTGGC 59 NA DesignRelaxed Mus musculus 50 Ezh2 ENSMUSG00000029687 ENSMUST00000114618,ENSMUST00000081721,ENSMUST00000114623 3 3 3 168 6 47508196 47508214 TAATGTACTCTTGGTCGCC 59 47504254 47506038 AATCCACATTCTCTGTCACC 59 NA Mus musculus 50 Klrd1 ENSMUSG00000030165 ENSMUST00000112063 2 1 1 60 6 129543762 129543782 CATTCAATCAACACCTTCTCC 59 129543804 129545441 ACAGCATTCAGAAACTTCC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Ddx47 ENSMUSG00000030204 ENSMUST00000032326 3 1 1 80 6 134967185 134967203 CTGTGTCCTCTAAGTACCA 57 134967245 134968078 GGTAGGTATCCTTGAATTTCG 58 NA Mus musculus 50 Pik3c2g ENSMUSG00000030228 ENSMUST00000111868 3 1 2 80 6 139845362 139848806 TCTCCCAGAATTTCCTCAC 58 139848850 139848868 ACGTAGTGACTCAGATCTC 57 NA Nonspecific Mus musculus 50 Cmas ENSMUSG00000030282 ENSMUST00000032419 3 1 1 81 6 142713164 142713184 GATATGACTCTGTCTTCTCCG 59 142713227 142716339 TCAGTCACTTCACGAACTC 59 NA Mus musculus 50 Vps33b ENSMUSG00000030534 ENSMUST00000032749 1 1 1 80 7 87428898 87428916 GGAAGAAGACAGTGAAACC 57 87428960 87429185 GTCACAAAGTCCACATCTC 58 NA Mus musculus 50 Psmc4 ENSMUSG00000030603 ENSMUST00000032824 1 1 1 80 7 28832094 28832205 AGCTGTACAAGCAGATTGG 59 28832032 28832052 CTAACATTGTCTTTCCACAGC 59 NA Mus musculus 50 Dgat2 ENSMUSG00000030747 ENSMUST00000033001 2 1 1 60 7 106306837 106307360 AGTACCTGATGTCTGGAGG 59 106306795 106306814 GAGAGCAAGTAGTCTATGGT 58 NA DesignNoJunction Mus musculus 50 Lcmt1 ENSMUSG00000030763 ENSMUST00000033025 1 1 1 81 7 130547989 130554249 CTTCAAATGGATAGTCACATGC 59 130554291 130554309 CTTCCAGCTCAGAAAGGTC 59 NA Mus musculus 50 Ndufb11 ENSMUSG00000031059 ENSMUST00000116621 3 1 1 91 X 20192657 20192847 GATTACAGGATGCAAGAGTG 58 20192585 20192604 TAGTTGGATTCCATGATGGG 59 NA Nonspecific Mus musculus 50 Fgf15 ENSMUSG00000031073 ENSMUST00000033389 2 1 1 83 7 152083111 152085558 AGATATACGGGCTGATTCG 58 152085605 152085623 ATCTGTACTGGTTGTAGCC 58 NA Mus musculus 50 Eras ENSMUSG00000031160 ENSMUST00000033500 1 1 1 60 X 7502066 7502086 CACTATCCAAGATTCCTACTG 57 7502026 7502045 ATTTAGAATGTAGCCTCCGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pgr15l ENSMUSG00000031212 ENSMUST00000033556 3 1 1 84 X 94272515 94272535 ATGATCTGGAGTATTGCAGTG 59 94272580 94273004 TATCACCATCCATGTTGACG 59 NA Mus musculus 50 2610029G23Rik ENSMUSG00000031226 ENSMUST00000033577 2 1 1 70 X 102276769 102277295 ACTGATTTCATCAGTTGACC 57 102277327 102277346 GGAACTCAGAGTAGATTTGG 57 NA DesignNoJunction Mus musculus 50 Nlgn3 ENSMUSG00000031302 ENSMUST00000113671,ENSMUST00000065858 1 2 2 80 X 98502462 98504103 ATGAAGATGAAGACATCCGA 58 98504145 98504164 CTGTTCCTTCCATGTAAGAG 57 NA Mus musculus 50 Gpm6b ENSMUSG00000031342 ENSMUST00000112235,ENSMUST00000112236,ENSMUST00000112233,ENSMUST00000060210,ENSMUST00000112228,ENSMUST00000112224,ENSMUST00000112223,ENSMUST00000112229,ENSMUST00000112227,ENSMUST00000112226,ENSMUST00000073975,ENSMUST00000112215 2 12 12 81 X 162813652 162813670 CACAAGTGCAGTGAAAGAG 58 162813715 162817931 GAGGAACACGAACATTCCA 59 NA Mus musculus 50 Gabra3 ENSMUSG00000031343 ENSMUST00000114554,ENSMUST00000055966 1 2 2 81 X 69785446 69785467 TCTTCACTAGAATCTTGGATCG 59 69756696 69785404 ACTTCAGTCACTGCATCTC 59 NA Mus musculus 50 Rbm41 ENSMUSG00000031433 ENSMUST00000113007,ENSMUST00000113011,ENSMUST00000033810,ENSMUST00000096311,ENSMUST00000087400 1 5 5 104 X 136529728 136529746 TGAAGAACATGTCCTGGAG 58 136528635 136529662 GAGACACATTCTTCAATGGAG 58 NA Mus musculus 50 Mt4 ENSMUSG00000031757 ENSMUST00000034207 3 1 1 214 8 96661164 96662140 GTATGTCTGGAGGGATCTG 58 96662797 96662815 TACTGTGTAGTCACTTCCC 57 NA DesignNoJunction, InUTR Mus musculus 50 1700055M20Rik ENSMUSG00000031794 ENSMUST00000034247,ENSMUST00000109487,ENSMUST00000098480 1 3 3 132 8 97843629 97843895 CAATGCCTGGATTTCACAG 59 97843991 97844009 TAGACCAATCTTCGATGGC 59 NA Mus musculus 50 Dpep3 ENSMUSG00000031898 ENSMUST00000034371 3 1 1 80 8 108502090 108502109 GCAGATTGATCTCATTCGTC 58 108501929 108502048 GTGTTATTCAGACCATCAGC 58 NA Mus musculus 50 Ddx25 ENSMUSG00000032101 ENSMUST00000034612 3 1 1 81 9 35359044 35360436 TTCGAGGAAACCGAATTCC 59 35358981 35358999 CACCAATCTAGGACAGTCC 59 NA Mus musculus 50 Plscr2 ENSMUSG00000032372 ENSMUST00000034932 2 1 1 100 9 92182561 92182580 TATAGTCCTTGCAAACACTC 57 92182640 92184519 GAATCAGAAGCTGATCTATCTG 58 NA Mus musculus 50 Pik3cb ENSMUSG00000032462 ENSMUST00000035037 3 1 1 80 9 99005992 99006011 CCACCGGGATTTATATCCAG 59 99001801 99005952 GAACTTGCTTCCATAACATCTG 59 NA Mus musculus 50 Lyzl4 ENSMUSG00000032530 ENSMUST00000077706 1 1 1 80 9 121493239 121493257 CCTCTTTCAGATTCGTGAC 57 121492165 121493195 GGATTCAGTAAAGCAGTGC 58 NA Mus musculus 50 Ankrd15 ENSMUSG00000032702 ENSMUST00000049400,ENSMUST00000078392 1 2 2 97 19 25505559 25507362 TGGAAGACAATGATGGCAG 59 25507423 25507441 TTTCGAGAAGTTGAGGTGG 59 NA Mus musculus 50 Trpa1 ENSMUSG00000032769 ENSMUST00000041447 3 1 1 80 1 14863801 14864455 CAGAAATATCGGCTGAAGGA 59 14863740 14863760 CTCCATCTTCTGGATGATGAG 59 NA Mus musculus 50 Camkv ENSMUSG00000032936 ENSMUST00000035700 1 1 1 80 9 107847701 107847826 AAGTCATCAAGACTGAGGAG 58 107847869 107847887 ACTTCTTACAGGTGTGCAG 59 NA Mus musculus 50 Slc35a4 ENSMUSG00000033272 ENSMUST00000036158 2 1 1 235 18 36841934 36841952 GTTACTCACTGAGCTGACC 59 36842151 36842169 AGAGGCAGTACAATAGAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ptplad1 ENSMUSG00000033629 ENSMUST00000036615 3 1 1 87 9 64838880 64840075 TGAAATCTTCAGGTATCCCT 57 64838812 64838831 AATCCACATAGTGTAACGGA 58 NA Mus musculus 50 AK129128 ENSMUSG00000033991 ENSMUST00000091466 1 1 1 80 13 76294756 76294775 TTACTCAATAACACTCAGCC 57 76294817 76310777 TTTGTCCTTAAGTGAAGCAG 58 NA Mus musculus 50 Zxdc ENSMUSG00000034430 ENSMUST00000113539,ENSMUST00000045740,ENSMUST00000075117 2 3 3 62 6 90322640 90322658 CAATATGACAAAGCCTGCC 59 90322684 90322794 AAATGGTCTTTCACCTGTG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Spert ENSMUSG00000034913 ENSMUST00000035243 2 1 1 60 14 75983849 75983867 TGGAACTAGACTACAACCC 57 75983807 75983826 TCCTGGAAGACAAACATCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nkx6-1 ENSMUSG00000035187 ENSMUST00000044125 1 1 1 110 5 102090909 102090927 CAAACGAAGTACTTGGCAG 59 102088652 102088670 CTTTCTCCACTTGGTCCTG 59 NA DesignNoJunction Mus musculus 50 Tmem16d ENSMUSG00000035189 ENSMUST00000070175,ENSMUST00000045601 1 2 2 80 10 88415127 88417424 ATCATTGTGTTTGAGCACC 58 88415065 88415083 CCTTAGATCTTTCGGGAGG 58 NA Mus musculus 50 Reep6 ENSMUSG00000035504 ENSMUST00000105358,ENSMUST00000105355,ENSMUST00000105354 3 3 3 81 10 79796269 79796289 TGTATCTTCTGTTCGGTTACG 59 79796331 79796442 GCTTTGACTGAAGCATATGC 59 NA Nonspecific Mus musculus 50 Bbs10 ENSMUSG00000035759 ENSMUST00000040454 1 1 1 62 10 110735956 110736279 TTAGCCAGGATGATAGTGG 58 110736305 110736323 CTTAGCACCATCTCCTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mospd3 ENSMUSG00000037221 ENSMUST00000111007,ENSMUST00000037620 1 2 2 113 5 138041041 138041213 CATTGACATTGTGATACGGC 59 138040947 138040965 TTTCTTCCAACCACTCGTC 59 NA Mus musculus 50 Slc12a9 ENSMUSG00000037344 ENSMUST00000039991 1 1 1 80 5 137773402 137773420 GCACTAACAGTCCTCTCAG 59 137772289 137773359 CCTGCTGATCATGAAGTAGG 59 NA Mus musculus 50 BC022687 ENSMUSG00000037594 ENSMUST00000037014 1 1 1 112 12 114052779 114053766 ATTCAGACCAAGCTCTCAG 58 114053842 114053860 TGTGGAATGGTGATGTAGC 59 NA Mus musculus 50 Bank1 ENSMUSG00000037922 ENSMUST00000041577,ENSMUST00000106270 1 2 2 84 3 135718756 135720368 ATCCAAGTGGTAATACTGCC 59 135717412 135717430 TCAACTTGGATTCGAGCAG 59 NA Mus musculus 50 Smg6 ENSMUSG00000038290 ENSMUST00000045281,ENSMUST00000108443 2 2 3 81 11 74867455 74952703 CCTCGGATAAGGTTATTGCA 59 74952747 74952765 TCTTCTTGTCCACAAAGGG 59 NA Mus musculus 50 Foxq1 ENSMUSG00000038415 ENSMUST00000042118 3 1 1 85 13 31651136 31651154 ATACTCCTACATCGCTCTC 57 31651203 31651221 TGAGGTACTCGTTGATCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC028528 ENSMUSG00000038543 ENSMUST00000090476,ENSMUST00000036360 1 2 2 100 3 95692213 95692791 GAGGATAGGTTGAACAGGT 58 95692131 95692149 TGAGGGTCCATAAGTTCTG 58 NA Mus musculus 50 Wdr26 ENSMUSG00000038733 ENSMUST00000036329,ENSMUST00000111053 1 2 2 80 1 183139392 183139411 GATGTCGTTTAGAGCATCCT 59 183139226 183139350 GGTCATTCTCTGCCTTATCC 59 NA Mus musculus 50 Ppp1r9b ENSMUSG00000038976 ENSMUST00000038696,ENSMUST00000107748 2 2 2 94 11 94862657 94863162 GATGATGAGGAGACAGGAG 58 94863220 94863238 AGTTCAAACACCTCAATGG 57 NA Mus musculus 50 1700019L03Rik ENSMUSG00000038987 ENSMUST00000102813 2 1 1 86 2 32633532 32633650 CTATCCAAAGAAAGCCAACG 59 32633465 32633483 ATAGGTTGTGATGGTCGAG 58 NA Mus musculus 50 Zzz3 ENSMUSG00000039068 ENSMUST00000106106 2 1 5 235 3 152083094 152109773 CACTTCAACAGTTATCAGAGAC 58 152111810 152111828 AAGTTCCCAAGGCTATTGG 59 NA DesignRelaxed Mus musculus 50 Hlx ENSMUSG00000039377 ENSMUST00000048572 3 1 1 133 1 186553920 186554584 AAGACACATTTCCAGGTCC 59 186553805 186553824 GATCTCAAACCTCTTCTCCA 58 NA Mus musculus 50 Zer1 ENSMUSG00000039686 ENSMUST00000113677,ENSMUST00000044751 1 2 2 80 2 29956605 29956623 CCAGGGTATTTCTCCAGTC 59 29955924 29956562 CAGTACTTGTCAGGGTAGAC 59 NA Mus musculus 50 Azi1 ENSMUSG00000039781 ENSMUST00000106229 3 1 2 73 11 119934277 119934445 TCAGGTACTACAACAGAAACG 59 119934224 119934242 TCTCTGGTCTGTCCTTAGG 59 NA DesignRelaxed Mus musculus 50 Defb5 ENSMUSG00000039785 ENSMUST00000110763 3 1 2 61 8 19247598 19247617 ATCCATTACCTTCTCTTTGC 57 19247641 19250701 CTAAAGACACCTGCAAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 NM_019540.2 ENSMUSG00000040065 ENSMUST00000045624 1 1 1 60 19 12504367 12504385 CCCAACCAGTTACTTTCCT 59 12504408 12504427 ATCCAGAGAAACACATACCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ranbp17 ENSMUSG00000040594 ENSMUST00000102815,ENSMUST00000037522 3 2 2 80 11 33404730 33404749 CACTCTTGGAACTGATTGAC 58 33400758 33404687 GAGCATAGGATGTTGTTCC 57 NA Mus musculus 50 Cyp2b23 ENSMUSG00000040650 ENSMUST00000077356 2 1 1 81 7 27458236 27459385 TCATGTTGCAGAGAAAGTC 57 27458173 27458191 TTTGATTCGGTCTTCAAGG 57 NA Mus musculus 50 Rbm35a ENSMUSG00000040728 ENSMUST00000108313,ENSMUST00000043781,ENSMUST00000108310,ENSMUST00000108311,ENSMUST00000108312,ENSMUST00000041113 1 6 6 80 4 11306488 11306507 AAAGAGTTCAAGAAGTGCTG 58 11294320 11306445 AAAGTTCAGGCTTTCTGTC 57 NA Mus musculus 50 Sox16 ENSMUSG00000041287 ENSMUST00000047373 1 1 1 85 11 69469322 69469340 TACACAACTACCCAAGGGA 59 69469389 69469960 GAAGAGGTGTAACTGCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Wdr79 ENSMUSG00000041346 ENSMUST00000048139 2 1 1 81 11 69391178 69391197 TGTCCTTCGGATTTACAACC 59 69377438 69391134 AAGGACAGGAACCATTTCG 59 NA Mus musculus 50 Tardbp ENSMUSG00000041459 ENSMUST00000084125,ENSMUST00000055827,ENSMUST00000105699,ENSMUST00000105700,ENSMUST00000095719,ENSMUST00000045180 1 6 6 97 4 147996126 147996144 CTCATAGTGTTGGGTCTCC 59 147994831 147996065 TCTTTCTTGACCTGAACCA 58 NA Mus musculus 50 Btbd7 ENSMUSG00000041702 ENSMUST00000045652 1 1 1 80 12 104028963 104028982 GCTATGAAATCCAGATCCGA 59 104026582 104028921 ACTTGTGAGGATTCTGTAGG 58 NA Mus musculus 50 Hnrpf ENSMUSG00000042079 ENSMUST00000035493 2 1 1 60 6 117874456 117874474 CTGGATAGGATGAGGTCTG 58 117874497 117874516 CACTGTATTCTTCATAGCCC 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Arsb ENSMUSG00000042082 ENSMUST00000091403,ENSMUST00000109482 1 2 2 80 13 94560168 94563989 GATACCTACTTCGGATACCT 57 94564031 94564050 ACCATTCAAAGACTCAATCG 58 NA Mus musculus 50 Ugcgl2 ENSMUSG00000042104 ENSMUST00000046196,ENSMUST00000022732 2 2 3 80 14 119402098 119402117 TGGATGGATATCGTTTCTGG 59 119401097 119402057 CATACAAGGCACTGATATGGT 59 NA Mus musculus 50 Dzip1 ENSMUSG00000042156 ENSMUST00000004055,ENSMUST00000110728 3 2 2 80 14 119301282 119301300 GGTAGAAGAGTTAGGCCAG 58 119300755 119301240 CTGGCAAATTCTCTAATCTGC 59 NA Mus musculus 50 Hsd3b7 ENSMUSG00000042289 ENSMUST00000046863,ENSMUST00000106272,ENSMUST00000106271 1 3 3 78 7 134945108 134945126 CATCCACAAAGTCAACGTG 59 134945385 134945403 GTAGACCAGGTACTGAGTG 58 NA DesignNoJunction Mus musculus 50 Olfr1370 ENSMUSG00000042869 ENSMUST00000058168 2 1 1 60 13 21164274 21164292 AGGAACAAGGACATGAAGG 59 21164232 21164251 CTCCCTTGTGATACAATGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Sbk1 ENSMUSG00000042978 ENSMUST00000056028 1 1 1 105 7 133433527 133433545 CAAGCACTATGAGCTTGTG 58 133434567 133434585 ATTCACAAATTTCAGGGCC 58 NA DesignNoJunction Mus musculus 50 Synpo ENSMUSG00000043079 ENSMUST00000097566,ENSMUST00000031639,ENSMUST00000115318 3 3 3 60 18 60762271 60762290 CTTCATCCTGGAAGTACACC 59 60762230 60762248 GGACTTAAGGATGCCACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A830043J08Rik ENSMUSG00000043230 ENSMUST00000058748 1 1 1 68 1 80197121 80209523 TAAGATTCTGCTGCAGGTC 59 80197071 80197089 TTCAAGAAGGGATGCTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hexim2 ENSMUSG00000043372 ENSMUST00000107037,ENSMUST00000062530 1 2 2 139 11 102995408 102995426 CATACCAACTGCAACACAG 59 102999574 102999592 GATTGGATCTCCTGTCCTG 59 NA DesignNoJunction Mus musculus 50 Casc1 ENSMUSG00000043541 ENSMUST00000111728,ENSMUST00000111727,ENSMUST00000060797,ENSMUST00000057366 1 4 4 80 6 145131788 145131806 GTACCACCTGGATGTTCTG 59 145130422 145131744 CCTTCCTGGAGTATCTCCA 59 NA Mus musculus 50 Pura ENSMUSG00000043991 ENSMUST00000051301 3 1 1 98 18 36447539 36447557 TTTATGCGAGTGAGTGAGG 59 36447619 36447637 GGAGTACTTGCAGAAGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 C130050O18Rik ENSMUSG00000044092 ENSMUST00000052176 1 1 1 60 5 139890851 139890870 TTCTATTGCTCCTGTATGCT 58 139890893 139890911 GTGTCCCTTTGAGAAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Il20rb ENSMUSG00000044244 ENSMUST00000093793 1 1 3 80 9 100368862 100373430 TAACCGAAATGCAACTGTC 58 100368800 100368818 TCTTCCAGCTCAATAACCA 58 NA Mus musculus 50 Lingo4 ENSMUSG00000044505 ENSMUST00000050975 3 1 1 60 3 94207202 94207221 CTGTGTAGTCAGTAATGTCG 57 94207244 94207262 TTGGATAACTTCCAGCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 B530045E10Rik ENSMUSG00000044633 ENSMUST00000060657 3 1 1 60 10 98884894 98884912 CCATCCTTGAAGAGGTACG 59 98884935 98884954 ATTAGTAGTCACCAAGGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1110033F04Rik ENSMUSG00000044649 ENSMUST00000058987 1 1 1 73 11 99496358 99496376 ATCTTGTAAGCCTACCCAG 58 99496303 99496321 CTCTTCAGAGCAGACAGAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Uqcrq ENSMUSG00000044894 ENSMUST00000109021 1 1 3 79 11 53242635 53244038 CCGTTTGTAGTGGTCTACC 59 53242574 53242592 TACATGGCTGGATTCTTCC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Insig1 ENSMUSG00000045294 ENSMUST00000059155 3 1 1 110 5 28401087 28401105 GTGGACATTTGATCGTTCC 58 28401179 28401610 GACGTGTACTGGTAGACAC 59 NA Mus musculus 50 Tnfrsf26 ENSMUSG00000045362 ENSMUST00000055723 2 1 1 116 7 150797700 150797718 TGTGGTTATCATAGCTGCT 58 150795950 150797524 CATAGCATAGTGGAGGAGAG 58 NA Mus musculus 50 Akr1e1 ENSMUSG00000045410 ENSMUST00000091848,ENSMUST00000110691 3 2 2 81 13 4598062 4598080 ACCATGAACAGCTTGAGAG 59 4596812 4598019 TATGGGTGACATTCAATCTGG 59 NA Nonspecific Mus musculus 50 Olfr984 ENSMUSG00000045812 ENSMUST00000056795 3 1 1 60 9 39908734 39908752 GGAGGCATCAAGATATTCC 57 39908692 39908711 GAGAAATGGCTATGTAACGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 A530057A03Rik ENSMUSG00000046338 ENSMUST00000062211,ENSMUST00000110373 1 2 2 80 2 127253094 127253233 ACAATGGTCAAGAGACCAG 59 127253275 127253295 GATACTTTCCCAGGAATGGAG 59 NA Mus musculus 50 Hnrnpa1 ENSMUSG00000046434 ENSMUST00000036004 1 1 2 60 15 103073460 103073481 TATGACAGCTATAACAACGGAG 59 103073502 103074064 AATTGCTTCCACTACCACC 59 NA DesignRelaxed Mus musculus 50 Tmem41b ENSMUSG00000047554 ENSMUST00000094097 1 1 1 161 7 117124625 117126181 TCAGCTTAGTGAGGAAGAG 57 117122976 117122994 GGGATAGCAAATGTTTGCA 58 NA Nonspecific Mus musculus 50 C030019I05Rik ENSMUSG00000048721 ENSMUST00000060185 3 1 1 60 11 46051244 46051264 TATTATGTACAGGCCCAACTG 59 46051286 46051304 ATGGAAGTTATAGCGCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Centb2 ENSMUSG00000049076 ENSMUST00000058033,ENSMUST00000100008 3 2 2 83 16 31127509 31131353 AGCAGAAGGATTTCTCCAG 58 31127444 31127462 ACAGATACCCTTCCATGAC 58 NA Mus musculus 50 Kcnk3 ENSMUSG00000049265 ENSMUST00000066295 3 1 1 84 5 30924647 30924665 TTCAGCTTCGTGTACATCC 59 30924713 30924731 CGTTCATGGTCATGAATCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gm711 ENSMUSG00000049897 ENSMUST00000055406 2 1 1 80 2 26796565 26796585 ATTACTCCCAAGGAACATTCC 59 26796627 26798660 TATGCATCCACTCAGTGTC 59 NA Mus musculus 50 Tmem151b ENSMUSG00000050405 ENSMUST00000052694 2 1 1 237 17 45682896 45683720 CTACTACCCAGGTCTACCA 58 45682677 45682695 TCCATGTAGTCATCCAAGC 59 NA DesignRelaxed Mus musculus 50 Olfr164 ENSMUSG00000050742 ENSMUST00000056727 3 1 1 60 16 19285985 19286004 GTCAGCTTTCTACACTATCC 57 19285944 19285964 GTTCCGGAGACTATAAATGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr330 ENSMUSG00000050818 ENSMUST00000062869 3 1 1 101 11 58343148 58343166 CTATGTGACACTAGCAGGT 58 58343065 58343083 TTCATGAGGACAGGATACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG331392 ENSMUSG00000051537 ENSMUST00000089189 3 1 1 60 X 20938212 20938231 CCTCTTGGACATCTATAGCT 57 20938254 20938272 CTGTAATTTCACCGTTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Krt71 ENSMUSG00000051879 ENSMUST00000023710 1 1 1 80 15 101568425 101568443 TGAAATCACTGAGCTGACC 59 101567185 101568381 TCTAGGTTAGAAGCCTGCT 59 NA Mus musculus 50 Pfdn4 ENSMUSG00000052033 ENSMUST00000075087,ENSMUST00000063682,ENSMUST00000109148 1 3 4 65 2 170341346 170342070 GAAACATCTCCAGAACTTAGAG 58 170342096 170342114 ATTAAGCAGTCGTCATCTG 57 NA DesignNoJunction Mus musculus 50 Adarb2 ENSMUSG00000052551 ENSMUST00000110670,ENSMUST00000110669,ENSMUST00000064473 2 3 3 90 13 8700902 8700921 CTCTTCCATCTCTACGTGAG 58 8700974 8712860 GTTTGCTGCTGTTCAAGTC 59 NA Mus musculus 50 A530023O14Rik ENSMUSG00000052749 ENSMUST00000064767 3 1 1 109 7 111506491 111506987 ACAATCATTTCAAGGGCTC 57 111505351 111505370 GGTGCTACTTCTTCTAAAGG 57 NA InUTR Mus musculus 50 Nebl ENSMUSG00000053702 ENSMUST00000028080,ENSMUST00000095135 3 2 4 81 2 17270487 17272339 CACATCTAAGGACCTACCG 58 17270424 17270442 ATGTAGTCACCATCTCGGA 59 NA Nonspecific Mus musculus 50 Vmn2r43 ENSMUSG00000053720 ENSMUST00000066317 3 1 1 80 7 9872298 9872316 AGATGAATTTGCAGCAGGT 59 9872359 9873728 AGGAGTTTACCTTCAAGCAG 59 NA Nonspecific Mus musculus 50 H2-T18 ENSMUSG00000054128 ENSMUST00000025312,ENSMUST00000102675,ENSMUST00000097329,ENSMUST00000095300 3 4 5 78 17 36323601 36323619 ATGAGAGGGAACACTTGTC 58 36323541 36323559 GGAAGATCCTTCATCCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mdm4 ENSMUSG00000054387 ENSMUST00000067398,ENSMUST00000067429,ENSMUST00000112313 3 3 3 90 1 134891152 134893149 TAACAAGAAGACGGTGGAG 58 134891080 134891098 CTCAGAGGTAAGTTCCACG 59 NA Mus musculus 50 Olfr63 ENSMUSG00000054666 ENSMUST00000067840 3 1 1 60 17 33406504 33406523 CACCTATACAGTCTTCACCC 59 33406546 33406564 CTCCTTATTCCTGAGGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000000421 ENSMUSG00000054931 ENSMUST00000062609 2 1 1 61 13 21573259 21573279 ATCTCAGGAATCTTTGGAGTG 59 21575739 21575757 TCTCAGGCTTCATTTCCAG 59 NA DesignNoJunction Mus musculus 50 Irs1 ENSMUSG00000055980 ENSMUST00000069799 1 1 1 60 1 82285477 82285495 CATCTCCTACCATTTCCCA 58 82285435 82285453 TCCTCAATAGAAGCCACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 B930037P14Rik ENSMUSG00000056185 ENSMUST00000070172 1 1 1 80 19 5498503 5498735 CACTGTTCAAACCAAGAGTG 59 5498442 5498460 CAGATGAACTCTTCGTGCT 59 NA Mus musculus 50 Olfr315 ENSMUSG00000056959 ENSMUST00000081533 2 1 1 60 11 58591667 58591686 ATTCTTCTCGGTCTCTTCAG 58 58591708 58591727 CTAACACAACAGAAAGCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Yipf1 ENSMUSG00000057375 ENSMUST00000106747,ENSMUST00000075693,ENSMUST00000106744 3 3 3 80 4 107009117 107013596 CCAGATCTCTATGGTCCCT 59 107013638 107013658 TAGGAAGTTAGAAAGGTTCCC 58 NA Mus musculus 50 Tas2r131 ENSMUSG00000057699 ENSMUST00000082085 1 1 1 60 6 132907539 132907557 CAAAGTAGCCCACATTTCC 58 132907497 132907515 CACACCTCTCAATCTCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr25 ENSMUSG00000058270 ENSMUST00000071449 3 1 1 60 9 38137565 38137583 AGCCTTTACTGTACAAGGC 59 38137607 38137625 GACACAAACATCAGCAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr69 ENSMUSG00000058662 ENSMUST00000080910,ENSMUST00000106878 3 2 2 63 7 110916430 110916449 CTCTCATTACCACATTTCCA 57 110916386 110916407 GTAGTTCGAAAGTACTTAAGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tubb2a ENSMUSG00000058672 ENSMUST00000056427 1 1 1 113 13 34168498 34168516 TGATAAGCGATGAGCATGG 59 34168143 34168423 GTACATATTTGTTGCCAGCAG 59 NA Mus musculus 50 Sohlh1 ENSMUSG00000059625 ENSMUST00000076989 1 1 1 102 2 25700782 25700800 TTGTCATTCAGTGAGCCAG 59 25700109 25700127 GAACAATGTCACTTGCCTC 59 NA DesignNoJunction Mus musculus 50 Cdh24 ENSMUSG00000059674 ENSMUST00000067784 2 1 1 85 14 55255228 55255246 CACTATCCGTACAGCAGTG 59 55252600 55255180 CAGAGCTATCCAACTCTGTG 59 NA Mus musculus 50 Dbp ENSMUSG00000059824 ENSMUST00000080885,ENSMUST00000107741,ENSMUST00000107740 2 3 3 60 7 52963792 52963810 AACCAATCATGAAGAAGGC 57 52963832 52965045 TACTTCTCATCCTTCTGTTCC 58 NA DesignRelaxed Mus musculus 50 1700129I15Rik ENSMUSG00000060726 ENSMUST00000113154,ENSMUST00000113152 1 2 3 60 X 132255146 132255164 CCTGAAGCTAACTGAAGAC 57 132254308 132255124 GACTATCAGACTAACAGCTCC 59 NA DesignNoJunction Mus musculus 50 4931433A01Rik ENSMUSG00000061298 ENSMUST00000106592,ENSMUST00000106591,ENSMUST00000097920,ENSMUST00000080744 1 4 6 93 4 110252767 110628176 TGAAAGAATTGCAGAGGGT 59 110628232 110628251 GTAGATTTCACCATTGGTGC 59 NA Mus musculus 50 1810013D10Rik ENSMUSG00000061461 ENSMUST00000073903 2 1 1 83 5 53658590 53668392 GGAATACCAGAAGGAGCAG 59 53669136 53669154 TCAGACCACACTTTCAACC 59 NA DesignNoJunction Mus musculus 50 Gmfb ENSMUSG00000062014 ENSMUST00000111817 1 1 2 111 14 47435881 47435899 AGATTGACAAGGATGAACG 57 47434648 47435278 CTATACACAATGAAGCGAGG 58 NA Mus musculus 50 Olfr495 ENSMUSG00000062147 ENSMUST00000071505 3 1 1 60 7 115539136 115539155 TTCCTTGATCTTCTGTGGAC 59 115539178 115539196 CAAAGGAGCCAAATCACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1465 ENSMUSG00000062199 ENSMUST00000080142 1 1 1 60 19 13388406 13388424 CATATGATCGCTATGCAGC 58 13388364 13388382 CCTGAAGTCATAGTGGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Glrp1 ENSMUSG00000062310 ENSMUST00000067625 2 1 1 71 1 90406481 90406499 AAAGTTTCACCAAACGACC 58 90406428 90406447 TAGCAACATCTCTGAAGAGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 ENSMUSG00000062319 ENSMUSG00000062319 ENSMUST00000076071 3 1 1 60 2 6871856 6871877 CTAAGTTCAACTTCCATGATGC 59 6871817 6871836 CCTTGAGCTTCACTTTACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ifit3 ENSMUSG00000062488 ENSMUST00000076249 3 1 1 104 19 34687522 34687540 CTTAAAGCTCACAGACCAC 58 34687608 34687626 GCAACTACAGTGAAATGGA 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 D130040H23Rik ENSMUSG00000062632 ENSMUST00000078257 3 1 1 107 11 121769519 121769540 TGTGATGTTGCAGATCTATAGG 59 121768136 121769273 CTTTCATGCCTTCCATGTC 58 NA Mus musculus 50 Psg20 ENSMUSG00000063305 ENSMUST00000108482 1 1 3 126 7 19268112 19269781 TTTCTTCAGGTGTACTCCG 58 19268004 19268022 GAAGATTGTGGACAAGGAG 57 NA DesignNoJunction Mus musculus 50 Olfr293 ENSMUSG00000063394 ENSMUST00000081474 3 1 1 60 7 93812955 93812975 ATGTGTATCTAAGACCTCCAG 58 93812997 93813015 ACAGAAAGTGTCATCTCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Stk24 ENSMUSG00000063410 ENSMUST00000079817 2 1 1 84 14 121691258 121691276 CATCTACTTGGCGGAAGAG 59 121686577 121691211 CAGAGAATATCTCTGCAGCC 59 NA Mus musculus 50 mt-Cytb ENSMUSG00000064370 ENSMUST00000082421 1 1 1 60 MT 15015 15039 GTCCTAGCCTTAATCTTATCTATCC 59 15056 15075 TTGAGGTATGAAGGAAAGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tacc1 ENSMUSG00000065954 ENSMUST00000084030,ENSMUST00000084512 3 2 2 121 8 26276084 26277842 AAATGATTGAGGACGAGCA 59 26275981 26275999 GAGATCAGAAAGGGACCTC 58 NA Mus musculus 50 OTTMUSG00000010173 ENSMUSG00000066009 ENSMUST00000091878,ENSMUST00000105728,ENSMUST00000105729 1 3 3 96 4 146085298 146089290 AAATACACCACAGGGTCTG 59 146089350 146089368 GTACAATGACCTCTGAGCA 58 NA Nonspecific Mus musculus 50 2610044O15Rik ENSMUSG00000066057 ENSMUST00000084298 3 1 1 83 17 95160906 95163832 GGTCTACAAATCTTGCAATCTG 59 95160844 95160864 TGTACAAGGTAGATGAGTCCA 59 NA Mus musculus 50 Olfr538 ENSMUSG00000066125 ENSMUST00000084457 1 1 1 103 7 147760554 147760572 ATTCTGTGGTCCAAAGGTC 59 147760639 147760657 CCACAAGAGTCATAACGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr514 ENSMUSG00000066241 ENSMUST00000084754 1 1 1 60 7 115969122 115969140 AATCTGCTACCCTCTAACC 58 115969080 115969099 CACCAATTTCACAAAGATCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Abpg ENSMUSG00000066586 ENSMUST00000085623 3 1 1 94 7 34729332 34729350 AATCCAGGATTGCTTTCGT 59 34728247 34728265 ATTTCTTGCATTCTGGGCT 59 NA DesignNoJunction Mus musculus 50 Hmcn1 ENSMUSG00000066842 ENSMUST00000074783 2 1 2 80 1 152503874 152503894 CAGGCCAGTATGTATGTAGAG 59 152503707 152503835 TAGGAGGCACATATACATTGAG 59 NA Mus musculus 50 Oas1g ENSMUSG00000066861 ENSMUST00000086368 2 1 1 133 5 121335883 121335901 TCAAGTTTGAGGTCCAGAG 58 121332065 121335786 GATACTACCATGACCCAGG 58 NA Mus musculus 50 Bub3 ENSMUSG00000066979 ENSMUST00000084502 3 1 1 134 7 138709856 138711706 GAACAAGCAGGGTTATGTG 58 138711803 138711822 ATCTGCTCAATGTTGTTCTC 58 NA Mus musculus 50 1700010H22Rik ENSMUSG00000067101 ENSMUST00000112955 2 1 2 69 5 98995457 98995475 CTAAAGAGACTGCTCTGCA 58 98993219 98993237 GAATCCACATCCTTTCGGT 59 NA DesignNoJunction, InUTR Mus musculus 50 Cnga1 ENSMUSG00000067220 ENSMUST00000087213 1 1 1 88 5 72996761 73000704 AACAAGGACAGGTTACCTG 59 72996691 72996710 GTTTAAACTGCAGGTTTGCT 59 NA Mus musculus 50 Olfr458 ENSMUSG00000068574 ENSMUST00000090156 2 1 1 60 6 42410143 42410161 AATCCTCTCGTCTACAGTC 57 42410101 42410119 TCAGAACTCGACTGAAAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nlrp1a ENSMUSG00000069830 ENSMUST00000108519 2 1 3 80 11 70937769 70955732 GGAACTTGAAGCTAAGAACC 58 70937708 70937727 ATGACCATGTTAGAAGAGGG 58 NA Mus musculus 50 Ifna1 ENSMUSG00000070903 ENSMUST00000107133,ENSMUST00000094972 1 2 2 64 4 88496058 88496076 GATGTGACCTTCCTCAGAC 59 88496104 88496122 CATTTGTACCAGGAGTGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr275 ENSMUSG00000070984 ENSMUST00000095085 3 1 1 60 4 52838369 52838389 GATGTATCTGATCACCTTGCT 59 52838408 52838429 AGAATCAAGGATAGTGATGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 7420416P09Rik ENSMUSG00000071235 ENSMUST00000095551 1 1 1 60 12 85991548 85991566 CTCCTACAAGGAGTTCCAG 58 85991590 85991608 CCACATGTAGTAGGTGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp817 ENSMUSG00000071291 ENSMUST00000076123 2 1 1 175 13 67595036 67595554 CATCTGGATTTCCTGGGTC 59 67593023 67593041 TGAGTAAGCAGTGACTTGC 59 NA DesignNoJunction Mus musculus 50 2410022M11Rik ENSMUSG00000071354 ENSMUST00000095785 2 1 1 60 14 57431663 57431682 CTATACCCATGTCTTTGGCA 59 57431705 57431723 TTAGGTTACAGGGAGTCCT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 A830039N20Rik ENSMUSG00000071567 ENSMUST00000096098 3 1 1 60 14 24111679 24111699 TATGTAACCAGACAGGAACTG 59 24111639 24111657 GGGTAGGTCATTTCAGAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG434172 ENSMUSG00000072259 ENSMUST00000097044 1 1 1 60 7 48542172 48542191 TATTCCACATCTGCTCAGTC 59 48542214 48543452 ATGTCTCCATTTGAACCAC 57 NA Nonspecific, DesignNoJunction Mus musculus 50 1700049E17Rik ENSMUSG00000072613 ENSMUST00000100701 1 1 1 83 14 42388611 42389309 AGGATTCCTACAGCTTCAC 58 42389356 42389374 TCTCATTCAGCAACATCCT 58 NA Nonspecific Mus musculus 50 ENSMUSG00000072614 ENSMUSG00000072614 ENSMUST00000100702 2 1 1 75 15 40964959 40964977 GTAGGCATTGTGGGTAGAG 59 40964902 40964920 AACAACTGCAAAGAAGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gdf2 ENSMUSG00000072625 ENSMUST00000100720 2 1 1 60 14 34754676 34757868 GAAGATGCTATATCGACAGCT 59 34757890 34757908 AGATCAGGATGTGCTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 D14Ertd449e ENSMUSG00000072680 ENSMUST00000100819,ENSMUST00000022417,ENSMUST00000100818 2 3 3 60 14 26745061 26745296 TCCTAAGGAATGGGTATTGG 58 26745020 26745038 AAGGCATACAAGGACTCTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 A730089K16Rik ENSMUSG00000072855 ENSMUST00000086909 3 1 1 60 5 77086192 77086210 TGAGGACAATAATGACCGA 57 77086233 77086252 CGATTGTATTGCTGAGTTCC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 EG545861 ENSMUSG00000072952 ENSMUST00000101222 1 1 2 63 6 85068619 85068637 TTGAGGTTGAAATGCACCT 59 85068570 85068592 CTCCTCTTCCTCCTAAAGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Vamp5 ENSMUSG00000073002 ENSMUST00000101285 3 1 1 131 6 72319296 72319316 GGGACAGTAGTAAACCATAGG 59 72319185 72319203 CAAACACCAGGATTCTCTG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 6530411M01Rik ENSMUSG00000073467 ENSMUST00000097416 3 1 1 159 17 9340930 9341987 CTTTAATAAGATCCAGGCTTGG 58 9340792 9340810 ATGTTGACCAAACCTTTCC 58 NA InUTR Mus musculus 50 ENSMUSG00000073551 ENSMUSG00000073551 ENSMUST00000097557 3 1 1 199 18 62900820 62900838 AGACATTGTGATGGCTTCC 59 62768469 62774564 TGTGATCTGATAAGCGCTG 59 NA InUTR Mus musculus 50 Gm833 ENSMUSG00000073699 ENSMUST00000097769 2 1 1 74 4 152073096 152073114 CTTTGACTTTCAGCTGGAG 58 152073152 152073170 CACCTTTCCCATCAGAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_996858.1 ENSMUSG00000073812 ENSMUST00000102809 1 1 3 95 4 88203976 88203994 CCTGAAGGACAGAAAGGAC 59 88203899 88203917 GTCAGCTCTTGTAGGACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc22a13 ENSMUSG00000074028 ENSMUST00000084797 2 1 1 92 9 119105150 119105168 AGCTTTGAGCTCTACTTGG 59 119104877 119105094 CACCCACTCTGAAATCAGG 59 NA Mus musculus 50 ENSMUSG00000074728 ENSMUSG00000074728 ENSMUST00000099256 3 1 1 60 3 5214855 5214874 GGAGTTGTTCTTGAACTGGA 59 5214897 5214915 CAAGTCGCTAATAATGCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG630579 ENSMUSG00000074867 ENSMUST00000099449 2 1 1 189 13 62270813 62270831 TTATAGGGACGTGCATGTG 59 62271169 62272522 ACTCCTTTCACACCTTCTG 59 NA Mus musculus 50 EG433024 ENSMUSG00000075038 ENSMUST00000099713 3 1 1 80 16 49929619 49955002 AAGAACAAGTCCTACACAGC 59 49929558 49929577 ACTCAGGGAAATTATGAGGC 59 NA Mus musculus 50 Olfr1252 ENSMUSG00000075076 ENSMUST00000099766 3 1 1 72 2 89561784 89561804 CTGCTTCAAGTTATCTCTGTG 58 89561732 89561750 TGTCACATCCAAAGTGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1006 ENSMUSG00000075211 ENSMUST00000099919,ENSMUST00000099917 3 2 2 60 2 85515183 85515201 TTGTTGACATTGTCAGGGA 59 85515141 85515160 GCAGTCTAGAATCAATTCGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Crebbp ENSMUSG00000075417 ENSMUST00000100216 1 1 1 66 16 4082499 4082517 GAAGGACTATCACCACTGG 59 4082451 4082469 AAGAGGAGGACAGGAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRBV12-1 ENSMUSG00000076466 ENSMUST00000103267 3 1 1 82 6 41063642 41063789 CAAGTTCAGCAGATTCTGG 58 41063835 41063853 AATACACGTCAGAACGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV6-23 ENSMUSG00000076585 ENSMUST00000103386 3 1 1 76 6 70210907 70210925 GGAGACACATTCTCAGGTC 59 70210671 70210689 ACTGGGTCATCACAATGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV13-1 ENSMUSG00000076671 ENSMUST00000103480 2 1 1 60 12 115505928 115505947 TTATGCAACGTACTATGCAG 58 115505887 115505905 GGAATCATCTCTTGAGACG 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRGV7 ENSMUSG00000076744 ENSMUST00000103553 1 1 1 60 13 19270155 19270173 TTACATCCACTGGTACCGA 59 19270193 19270215 GTTATAGTAGAGAAGGTGCTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV7-6 ENSMUSG00000076854 ENSMUST00000103666 1 1 1 60 14 54336833 54336852 ATCCATCTTCTCTAATGGCA 58 54336874 54336893 GGCTCTATTGAGGTAAACTG 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Rex2 ENSMUSG00000078499 ENSMUST00000116265,ENSMUST00000105732 2 2 3 60 4 145881344 145884373 GTGTCTATTAACCTTCAAGGAC 58 145884394 145884412 GAGACATTCCCATTCCTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 NP_001091447.1 ENSMUSG00000078661 ENSMUST00000107318 2 1 2 65 4 73550205 73550223 ATCCTGTACGAGATCTTGG 58 73548215 73550176 ATTATACAGAGCACCTGGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Atp11a ENSMUSG00000079149 ENSMUST00000066838 3 1 1 89 8 12861648 12861666 CAAGTGCCTTTCTGTTGAG 58 12861716 12864932 GATGTTGTATGTTCTGTTGGTC 59 NA InUTR Mus musculus 50 Mphosph8 ENSMUSG00000079184 ENSMUST00000116468,ENSMUST00000022503 3 2 2 80 14 57315513 57315531 TTCATTCAGTCCTGTTGCT 59 57315574 57315981 ATTAGCAACTTAACCTTGGC 58 NA Mus musculus 50 EG434459 ENSMUSG00000079244 ENSMUST00000096170 2 1 1 82 14 52275599 52277385 TTGAACTACAGCATCAGGC 59 52277430 52277449 TTCTCATTCAGCAACATCCT 59 NA Nonspecific Mus musculus 50 Cntf ENSMUSG00000079415 ENSMUST00000025599 2 1 2 93 19 12839886 12844674 CAGAACGGTTGATTTAGGG 58 12839811 12839829 CTTGCTAGCCAGATAGAGC 59 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 Atg4a ENSMUSG00000079418 ENSMUST00000112971 3 1 1 80 X 137530111 137530130 AAGATGCCACAGTCTTTAGG 59 137530171 137593280 GAGCTCATCTCCTAAGAATCC 59 NA Nonspecific Mus musculus 50 Hoxa3 ENSMUSG00000079560 ENSMUST00000114434 1 1 2 80 6 52133786 52150851 CTCCCTCCATGTTAAGAGTG 59 52133725 52133743 CTGAACCAGGAATGGTCTC 59 NA InUTR Mus musculus 50 Ttll2 ENSMUSG00000079722 ENSMUST00000115747 3 1 1 69 17 7555311 7555329 CTACTTTCAGAGCCTCCAG 59 7555260 7555279 TTCATTAGCTTCTGGAGCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Myo18a ENSMUSG00000000631 ENSMUST00000108375,ENSMUST00000108376,ENSMUST00000000645,ENSMUST00000092884 3 4 10 81 11 77667385 77668189 CATCAACAGTTTGCAGGAC 59 77671234 77671252 CTCTGAGTCCACATCTGAG 58 NA Mus musculus 50 Scin ENSMUSG00000002565 ENSMUST00000078481 2 1 2 142 12 40799997 40800016 TGTTCAAAGACAAACCACTC 58 40789862 40799892 CGGAACTTCTTCAATCTCC 57 NA Mus musculus 50 Pnkp ENSMUSG00000002963 ENSMUST00000107876,ENSMUST00000003044,ENSMUST00000098478 2 3 4 82 7 52115100 52115118 CCTTTGACCTAGATGGGAC 59 52115163 52115267 GTACAGAATCCTCCAGTCAC 59 NA Mus musculus 50 Pscd2 ENSMUSG00000003269 ENSMUST00000107729,ENSMUST00000056820 2 2 2 61 7 53066256 53066274 CCTTTGCCCAGAGATACTG 59 53066079 53066231 GTAGCAGGTGTCTGTAGAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Cacna1b ENSMUSG00000004113 ENSMUST00000102939,ENSMUST00000070864 3 2 7 81 2 24504042 24504061 AACGTCTTTGACTTTGTCAC 58 24494718 24503999 TGATGAAGTTGTTCGTTTCC 58 NA Mus musculus 50 Cd44 ENSMUSG00000005087 ENSMUST00000111197,ENSMUST00000111194 3 2 15 80 2 102682525 102693181 TTGGCCACCAATATAGACAG 59 102682464 102682483 GTTATTGAAAGGAGGCTGTG 58 NA Mus musculus 50 Sqrdl ENSMUSG00000005803 ENSMUST00000005953,ENSMUST00000110506 2 2 2 81 2 122613299 122613317 ATTCAAGATAGAGTGGCGG 59 122613360 122618101 GGTATCTGTAGGAGATCTCCT 59 NA Mus musculus 50 Zfp179 ENSMUSG00000010086 ENSMUST00000060255 3 1 4 81 11 61264529 61264834 GGCTATCTAGAGATGTTCGT 58 61264467 61264488 GAAATTGTCTTACCTGGATTGG 59 NA Mus musculus 50 1700021C14Rik ENSMUSG00000010538 ENSMUST00000107556,ENSMUST00000010682 3 2 2 93 3 88099318 88099338 CACTAGTAACCCTACTAAGGA 57 88091072 88091091 TGGAAGATCAATGTAACTGG 57 NA DesignNoJunction Mus musculus 50 Rbm25 ENSMUSG00000010608 ENSMUST00000048155 2 1 2 102 12 84987244 84989156 AGCTCTTAGCTAAATGTGGT 58 84992249 84992270 GATTCAGGCTCTTTATACTCAC 58 NA Mus musculus 50 Zfp715 ENSMUSG00000012640 ENSMUST00000012796,ENSMUST00000107986,ENSMUST00000086011 3 3 4 89 7 50566450 50566468 CTGCAGATCCAAATTTCCA 57 50557086 50557104 CATCCTCAAAGGACATCCA 58 NA DesignNoJunction Mus musculus 50 Arnt ENSMUSG00000015522 ENSMUST00000015666 2 1 4 107 3 95271119 95274132 CACTAAGTTCCACAGACGG 59 95274202 95274221 AAGATGGTTAGCTTGTCTGG 59 NA Mus musculus 50 Nlrp5 ENSMUSG00000015721 ENSMUST00000086341 3 1 3 80 7 24195025 24202314 CAGACATCAGATAATGGAGG 57 24202357 24202375 GTGTAGATCCACACTTGTG 57 NA Mus musculus 50 Abo ENSMUSG00000015787 ENSMUST00000102900,ENSMUST00000114045,ENSMUST00000015931 3 3 3 99 2 26703802 26703820 TTCCTAAGCTTCAGAAGCC 59 26701597 26702099 GAACATCTTTCCTAGTGGGT 59 NA Mus musculus 50 H2afy ENSMUSG00000015937 ENSMUST00000016081 2 1 3 166 13 56185640 56191131 AAAGATGACCTAGGAAACAC 57 56184592 56184611 CAGACAGGACTATTACAGTG 57 NA Mus musculus 50 Wt1 ENSMUSG00000016458 ENSMUST00000016602,ENSMUST00000111101,ENSMUST00000111100,ENSMUST00000111099,ENSMUST00000111098 3 5 5 93 2 105009201 105009220 ATACCAGTGTGACTTCAAGG 59 105009276 105010096 GAATGGTTTCACACCTGTG 58 NA Mus musculus 50 Med24 ENSMUSG00000017210 ENSMUST00000017354,ENSMUST00000021257,ENSMUST00000100500 3 3 3 80 11 98568192 98568210 TGAGCTCTTACTCTTCCCA 59 98567783 98568149 TGACATAGTCCTCAATGTCC 58 NA Mus musculus 50 Taok1 ENSMUSG00000017291 ENSMUST00000058496,ENSMUST00000017435 3 2 2 80 11 77355328 77358800 GAGTCTGAAGTCTAAAGAACTC 57 77355269 77355287 AATGCTTTGTACTGTCTGG 57 NA Mus musculus 50 Slc12a5 ENSMUSG00000017740 ENSMUST00000017884,ENSMUST00000099092,ENSMUST00000109311 2 3 3 128 2 164801947 164801967 TACATGATTTCCAGGTCTCTG 59 164802057 164804790 GAAGAGATAAGCCAGCAGG 59 NA Mus musculus 50 Zbtb4 ENSMUSG00000018750 ENSMUST00000108642 2 1 7 60 11 69589928 69589947 CCTAGAACAGATGGAGAGTG 58 69595312 69595330 TTCTAAATCTTGCGTGCTG 58 NA DesignNoJunction Mus musculus 50 Atp5g3 ENSMUSG00000018770 ENSMUST00000111996,ENSMUST00000018914 1 2 2 80 2 73746754 73747248 TATGCCAGAAACCCTTCAC 59 73746692 73746710 GAGACCCATAGCTTCAGAC 59 NA Mus musculus 50 Ahr ENSMUSG00000019256 ENSMUST00000116436,ENSMUST00000110811,ENSMUST00000019400 2 3 3 81 12 36199793 36211368 AAGAGCTTCTTTGATGTTGC 59 36199731 36199750 CTCTGATTTGTGCTCTACAC 58 NA Mus musculus 50 Tmpo ENSMUSG00000019961 ENSMUST00000105293 1 1 6 91 10 90621556 90621574 GAAGCTTGAGAAGAGGGAG 59 90614533 90621501 TTTCTCCCACCTGATTGTG 59 NA Mus musculus 50 Usp15 ENSMUSG00000020124 ENSMUST00000020334,ENSMUST00000105258,ENSMUST00000105259 1 3 3 82 10 122608211 122608229 AGAACTGAAGCTCTGTGAG 58 122605420 122608168 CAATCGTATCTATTGTGTCAGC 59 NA Mus musculus 50 Ccdc139 ENSMUSG00000020280 ENSMUST00000020520,ENSMUST00000109525,ENSMUST00000058163,ENSMUST00000109524 2 4 4 130 11 23567298 23567316 CTGACTGAGGAGAACAAGC 59 23567410 23572521 TCATTGAGCAACTCCTTGG 59 NA Mus musculus 50 Kremen1 ENSMUSG00000020393 ENSMUST00000020662,ENSMUST00000072714 2 2 2 82 11 5138494 5143785 TATTGCAGAAATCCAGATGG 57 5138431 5138450 TCACAGTACTTCCAGTAGAC 58 NA Mus musculus 50 Dbnl ENSMUSG00000020476 ENSMUST00000109845,ENSMUST00000020769,ENSMUST00000102928 2 3 3 136 11 5695548 5695566 TCCATAAGGAAAGCACCTC 58 5696816 5697035 TTCTTCCTTCTCAGCTTTGG 59 NA Mus musculus 50 Srebf1 ENSMUSG00000020538 ENSMUST00000108737,ENSMUST00000020846,ENSMUST00000064158 3 3 3 80 11 60014183 60014201 GTTTCCAACATGACCTGAG 58 60014024 60014139 CCTCATGTAGGAATACCCT 57 NA Mus musculus 50 Tyki ENSMUSG00000020638 ENSMUST00000020969,ENSMUST00000085526 1 2 3 110 12 27162004 27162023 ACTGTGAATTCTGAGGAGAG 58 27162096 27162886 CATTTCCACCTTCTGACGA 59 NA Mus musculus 50 Nf1 ENSMUSG00000020716 ENSMUST00000071325,ENSMUST00000108251,ENSMUST00000108248,ENSMUST00000097941 3 4 4 80 11 79248356 79248377 GTCCTTCATCAGTTAGATAGCA 59 79248417 79250201 CATTTGTGAGCTGATTTCCC 59 NA Mus musculus 50 Ddx5 ENSMUSG00000020719 ENSMUST00000021062,ENSMUST00000106778 2 2 3 252 11 106646256 106646274 TATTGGTGCACTGGAACTG 59 106645416 106645434 ATTTAGAACCCAGTCACGT 58 NA DesignNoJunction Mus musculus 50 Rhbdf2 ENSMUSG00000020806 ENSMUST00000103028,ENSMUST00000103029,ENSMUST00000092408 2 3 3 130 11 116466473 116466569 CAAGATGCCCAAGATTGTG 59 116466361 116466379 CACTGGTGAAGGATGTGAG 59 NA Mus musculus 50 Ubtf ENSMUSG00000020923 ENSMUST00000107121,ENSMUST00000107119,ENSMUST00000006754,ENSMUST00000107117,ENSMUST00000107115 2 5 7 117 11 102172776 102172796 TATCCAGAATGCCAAGAAGTC 59 102171876 102172697 GTCCCGCATAATCTCATCC 59 NA Mus musculus 50 Papola ENSMUSG00000021111 ENSMUST00000109901 1 1 3 106 12 107047908 107056587 GTAGACACGTACTTCTAGCA 58 107057026 107057044 ATTCTTCTCCAAGCTTCCA 58 NA Mus musculus 50 9330134C04Rik ENSMUSG00000021470 ENSMUST00000095724,ENSMUST00000109778,ENSMUST00000067821 3 3 7 84 13 63959626 63967275 TGTTGACAGAGCGTATAGG 58 63967323 63967341 CATGATCTCCTCCACTGTG 59 NA Mus musculus 50 Fgf10 ENSMUSG00000021732 ENSMUST00000022246 2 1 1 61 13 119570380 119570399 CTTAGCCATGAACAAGAAGG 58 119577929 119577950 GCTTACAGTCGTTGTTAAACTC 59 NA DesignNoJunction Mus musculus 50 6330409N04Rik ENSMUSG00000021930 ENSMUST00000022497 2 1 2 137 14 62164628 62164646 TGAACCAGATTCCTCTTGG 58 62159067 62164530 ATGTTATACCCACTACATCTCC 58 NA Mus musculus 50 Lcp1 ENSMUSG00000021998 ENSMUST00000110915,ENSMUST00000022575,ENSMUST00000110916,ENSMUST00000110913 1 4 4 93 14 75608362 75610256 ACATCAAGGACTCCAAAGC 59 75610313 75610331 GACATGTCAATCACAACCG 59 NA Mus musculus 50 Fyb ENSMUSG00000022148 ENSMUST00000090461 1 1 2 135 15 6593749 6594765 AGATGATGACGATGGATCC 58 6594861 6594882 GTCTGATTCAGAGACTTTAGGT 59 NA Mus musculus 50 Sqle ENSMUSG00000022351 ENSMUST00000022977,ENSMUST00000100640 2 2 2 81 15 59155210 59155228 CTCCAAGTTCAGGAAGAGC 59 59155273 59155370 TGGTGCATCCTTCATAAGG 59 NA Mus musculus 50 Nell2 ENSMUSG00000022454 ENSMUST00000023090,ENSMUST00000075275 1 2 2 80 15 95129401 95177203 CTCATGTACAGAACATGATGAG 58 95129342 95129360 CCTCCAACAGTGTTAAAGC 58 NA Mus musculus 50 Parp9 ENSMUSG00000022906 ENSMUST00000114880,ENSMUST00000114877 2 2 3 82 16 35943526 35943544 CTTTGCTGAGCTCTTTCCT 59 35943590 35947598 GAGAATTGTTGGCTGAACC 59 NA Mus musculus 50 Sfrs7 ENSMUSG00000024097 ENSMUST00000063417,ENSMUST00000112421,ENSMUST00000063403 3 3 3 83 17 80603703 80603721 ATCTAGATCCCATTCCCGA 59 80603558 80603656 GATGCTGATCTTGACCTCC 59 NA Mus musculus 50 Taf11 ENSMUSG00000024218 ENSMUST00000114848,ENSMUST00000025057 1 2 2 86 17 28042257 28042278 GCTGAAACTAGACATTAAGGAC 58 28040119 28042210 GAAGAGACCAGGATTTGCA 59 NA Mus musculus 50 Smad4 ENSMUSG00000024515 ENSMUST00000025393,ENSMUST00000114939 2 2 2 81 18 73818275 73818293 CTAATTTGCCTCACCACCA 59 73816890 73818230 TGAACTGGCCAGTAATGTC 59 NA Mus musculus 50 Csf1r ENSMUSG00000024621 ENSMUST00000025523,ENSMUST00000115268 2 2 4 80 18 61283911 61283930 CCTTCATTGACCCTACTCAG 59 61283971 61284142 CTAGAGTCTTACCAAACTGCA 59 NA Mus musculus 50 Ms4a4c ENSMUSG00000024675 ENSMUST00000072729 3 1 2 80 19 11493541 11493560 TAATGGGTGTAGTCAGTGTG 59 11493602 11495760 AAATATCCAAACCCTTGGTG 58 NA Nonspecific Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000086848,ENSMUST00000111651 2 2 15 97 19 55937963 55937981 CCTCAGACTTCACTGTCAG 59 55938041 55982921 TTTGTTCGACTCCAGATACC 59 NA Mus musculus 50 Aspscr1 ENSMUSG00000025142 ENSMUST00000026135,ENSMUST00000106159,ENSMUST00000103016,ENSMUST00000106160 2 4 5 106 11 120564972 120565397 TTACCTATTCATCGCTCCAC 59 120569999 120570017 GTTCTTCAGCTCCAAAGTG 58 NA Mus musculus 50 Btrc ENSMUSG00000025217 ENSMUST00000111940,ENSMUST00000065601 3 2 3 123 19 45497722 45531032 GCTTTCCAGAATTCCTCAG 58 45545523 45545541 CTTGGTTTATGCAAAGCCT 58 NA Mus musculus 50 4930579G22Rik ENSMUSG00000025535 ENSMUST00000111312 1 1 2 60 5 130386805 130386961 CTGGGCATTATTGAAACCT 57 130386985 130387003 GATCTTGGTTACAGCTGGA 58 NA DesignRelaxed, InUTR Mus musculus 50 Eif4a3 ENSMUSG00000025580 ENSMUST00000026667,ENSMUST00000106254,ENSMUST00000106253 1 3 3 244 11 119157402 119157420 CACCTTCAGTGTCTCAGTG 59 119155711 119155894 GGATCATATCAAAGACGCG 58 NA DesignRelaxed Mus musculus 50 Lrrfip1 ENSMUSG00000026305 ENSMUST00000068116,ENSMUST00000097649 2 2 4 80 1 93003958 93008741 GATGCTCGAGAAACATGGA 59 93008784 93008803 CCAACGTCATTTACTGTGTC 59 NA Mus musculus 50 Mki67ip ENSMUSG00000026377 ENSMUST00000027626 2 1 2 82 1 120220289 120224206 CTAGAAGTAAGCGGACTGG 59 120224252 120224270 TTCTGCAACTATCTTGGCA 59 NA Mus musculus 50 Mpzl1 ENSMUSG00000026566 ENSMUST00000111435,ENSMUST00000068705 2 2 2 90 1 167535801 167535819 CACCTATATCTGCGATGTC 57 167534863 167535748 CAACAGGTTGTCTATTTCCA 57 NA Mus musculus 50 Ush2a ENSMUSG00000026609 ENSMUST00000061932,ENSMUST00000060479,ENSMUST00000027905 3 3 3 89 1 190142894 190142915 GCATTTGATACAAGAACTCTCC 59 190142962 190174926 CTGCTCTGAACCATTTAAACTC 59 NA Mus musculus 50 Dclre1c ENSMUSG00000026648 ENSMUST00000115066,ENSMUST00000115067,ENSMUST00000061852 1 3 7 80 2 3370455 3374819 AGAGATGAAATCACAGTGGA 58 3375968 3375986 CTTCAGACTCCATTGACCA 58 NA Mus musculus 50 Odf2 ENSMUSG00000026790 ENSMUST00000113763,ENSMUST00000028128,ENSMUST00000113764 1 3 13 100 2 29747778 29747796 ACCCAGTGTAACTGTTACG 59 29749027 29756609 AATGAGGTGGATTCTTGGT 58 NA Mus musculus 50 Lcn5 ENSMUSG00000026937 ENSMUST00000100313,ENSMUST00000028306,ENSMUST00000100312 3 3 3 112 2 25515641 25516160 GTCACCAGAATATCAGGAGAG 59 25516234 25516252 TTCATGGCTCGATGTACTG 59 NA Mus musculus 50 Grin1 ENSMUSG00000026959 ENSMUST00000114312,ENSMUST00000114307,ENSMUST00000114318,ENSMUST00000114314,ENSMUST00000114317,ENSMUST00000114310,ENSMUST00000028335,ENSMUST00000114308 3 8 8 81 2 25159300 25159318 TGACAGGAAGATCATCTGG 58 25154047 25159258 TGTCACTATCTTTAGTCTGGTG 59 NA Mus musculus 50 4930571C24Rik ENSMUSG00000026963 ENSMUST00000028340 1 1 1 157 2 25143983 25144001 TATTGCCCTCATTGTGGTG 59 25144495 25144513 CTATGCGATCTTCCTGGAC 59 NA DesignNoJunction Mus musculus 50 Nckap1 ENSMUSG00000027002 ENSMUST00000111760,ENSMUST00000028386 2 2 3 80 2 80385299 80388072 AGAAATGGATCATCTTTGGC 58 80385238 80385256 CTAGCTTCCAAAGGTTCAG 57 NA Mus musculus 50 Lrrc57 ENSMUSG00000027286 ENSMUST00000102499,ENSMUST00000102498,ENSMUST00000102496,ENSMUST00000090011,ENSMUST00000028742,ENSMUST00000102497 3 6 6 81 2 120434455 120434473 ACCGCCTCTGATAATAGGA 59 120433787 120434412 TTCATCAGGTAGAACAGTCAG 59 NA Mus musculus 50 Rasgrp1 ENSMUSG00000027347 ENSMUST00000028823,ENSMUST00000102534 1 2 3 80 2 117114459 117115095 CAAAGGATGGTGGATTCTG 58 117114397 117114416 GATCTTCTCAAACTCCTCCT 58 NA Mus musculus 50 Cst12 ENSMUSG00000027443 ENSMUST00000028932 1 1 1 61 2 148618190 148618208 ACAATTGTCCATTGCAGGA 59 148618978 148618996 CTCCACAATGTAAGTGCAG 58 NA DesignNoJunction Mus musculus 50 1700058C13Rik ENSMUSG00000027482 ENSMUST00000109746,ENSMUST00000028984 2 2 2 91 2 153961350 153962005 ACATTGAATTCAAACTGCCC 59 153962059 153962077 CTCATCTTTCTCCAGCCAG 59 NA Mus musculus 50 1700030G11Rik ENSMUSG00000027517 ENSMUST00000029022,ENSMUST00000109112 1 2 2 142 2 173398105 173403491 GGAATTCTGATGGATGATGC 58 173396701 173398000 AGACATGACATCTTGCTGG 59 NA Mus musculus 50 Zbtb46 ENSMUSG00000027583 ENSMUST00000029106,ENSMUST00000087409 1 2 2 80 2 181146673 181158131 AGACTCAAATGTAGACCTGAC 59 181146613 181146631 ATGTGAGCATAGAGCTCTG 58 NA Mus musculus 50 Ghrh ENSMUSG00000027643 ENSMUST00000029172,ENSMUST00000109536 1 2 2 85 2 157159161 157159179 CTACAGGAAACTCCTGAGC 59 157157586 157157604 TTTGTTCCTGGATCCTCTC 58 NA DesignNoJunction Mus musculus 50 Ppm1l ENSMUSG00000027784 ENSMUST00000029355,ENSMUST00000068481 2 2 2 60 3 69301845 69301865 GACAGTCTCCTATGATGAAGC 59 69353264 69353285 GTCTTTATCTGAGAGTAGAGCG 59 NA DesignNoJunction Mus musculus 50 G430022H21Rik ENSMUSG00000028114 ENSMUST00000090371 2 1 2 180 3 123068057 123075489 TTCCAGAGAACAAAGTACCC 59 123067896 123067914 CTGAGGTCACATTCCTGAG 59 NA Mus musculus 50 Bnipl ENSMUSG00000028115 ENSMUST00000107195,ENSMUST00000029760 3 2 3 84 3 95048955 95048973 TTGCTTCCTGCTATCTACC 58 95048178 95048909 AAAGTTCCCACCATATACCTG 59 NA Mus musculus 50 4930547C10Rik ENSMUSG00000028314 ENSMUST00000029995,ENSMUST00000107671,ENSMUST00000107673 3 3 3 60 4 52623697 52623718 TTACAACATGGAGACCTATGAC 59 52623738 52623757 CGAACTCTTTGAAACAGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmod1 ENSMUSG00000028328 ENSMUST00000107773,ENSMUST00000030012 3 2 2 81 4 46105132 46106789 CAACATCCGGAATATTCCC 57 46106833 46106852 GCTGAACTTCTTCACATAGG 58 NA Mus musculus 50 Unc13b ENSMUSG00000028456 ENSMUST00000107955,ENSMUST00000084655,ENSMUST00000107952,ENSMUST00000107953 3 4 6 162 4 43272335 43272353 AATACTTCCATGCAGGAGG 59 43272479 43273880 CCTTTCCCATCATGTACCT 58 NA Mus musculus 50 Tln1 ENSMUSG00000028465 ENSMUST00000030187,ENSMUST00000102947,ENSMUST00000107901 2 3 3 94 4 43557350 43557455 CTATGCAGGTATTGCAGCT 59 43557274 43557292 CTGCAGGATCTGATGTCAG 59 NA InUTR Mus musculus 50 2310009E04Rik ENSMUSG00000028573 ENSMUST00000107085,ENSMUST00000043335,ENSMUST00000107089 2 3 8 116 4 95467314 95467332 TTCTGGTTGAATGAAGGTG 57 95478855 95487585 TTTCTGTAGGTTTCTGGCT 58 NA Mus musculus 50 Orc1l ENSMUSG00000028587 ENSMUST00000102744,ENSMUST00000075835 2 2 2 80 4 108270070 108271934 GTATACATTAGGAGGAAGGCA 58 108271974 108271994 AGAACTCTTTCTATGGACACG 59 NA Mus musculus 50 Macf1 ENSMUSG00000028649 ENSMUST00000082108,ENSMUST00000084301,ENSMUST00000097899,ENSMUST00000097898,ENSMUST00000106214,ENSMUST00000097897,ENSMUST00000106224 3 7 12 80 4 123213496 123213514 TGATGACATCACAGATGGC 59 123191234 123213453 ATGTCAGAGATCTGGAAGTG 58 NA Mus musculus 50 Mutyh ENSMUSG00000028687 ENSMUST00000102699,ENSMUST00000030449 3 2 3 154 4 116488609 116488630 CAGTGATCGACTATTATACTCG 57 116489103 116489196 CTCTACCACCTTCCTAGCT 59 NA DesignRelaxed Mus musculus 50 Pomgnt1 ENSMUSG00000028700 ENSMUST00000106498,ENSMUST00000106496,ENSMUST00000079561,ENSMUST00000079267,ENSMUST00000106494 2 5 5 83 4 115824468 115824486 TCAAGTTGATCCTGGACAC 59 115824533 115824693 CTAGGGCCTCATCATAGTC 58 NA Mus musculus 50 Trspap1 ENSMUSG00000028898 ENSMUST00000030730,ENSMUST00000105962,ENSMUST00000105959,ENSMUST00000105960 2 4 5 75 4 131877714 131881130 GACAATAGCCCTGAGTACTC 59 131877658 131877676 AGAACTCATACAGCATGCC 59 NA DesignRelaxed Mus musculus 50 Ptpru ENSMUSG00000028909 ENSMUST00000105987,ENSMUST00000030741,ENSMUST00000105986,ENSMUST00000105985,ENSMUST00000105984 3 5 6 89 4 131379799 131379817 GTATGACGACTTCCAATGG 57 131376876 131376894 TTGACCATCAAGTAGGCAC 59 NA DesignNoJunction Mus musculus 50 Ablim2 ENSMUSG00000029095 ENSMUST00000114205,ENSMUST00000114206,ENSMUST00000101280,ENSMUST00000114204 2 4 7 104 5 36200518 36200536 CTAACTCTCCAGACCTGGA 59 36200601 36217482 TCTTATACTGTGAGTAGAGGCT 59 NA Mus musculus 50 St7 ENSMUSG00000029534 ENSMUST00000115419,ENSMUST00000081635,ENSMUST00000077080,ENSMUST00000053148 2 4 7 116 6 17796284 17796302 GATTCAGATCATCTTCGCC 58 17798068 17800366 GGACCTAATTTCGTTTATCTCC 58 NA Mus musculus 50 Phf14 ENSMUSG00000029629 ENSMUST00000115511,ENSMUST00000115510,ENSMUST00000115514,ENSMUST00000090632 1 4 4 80 6 11912718 11912737 ATGTGTAGAGCCTATTTCCA 58 11912779 11936350 TGCTATATCCTCTTCTGCTG 58 NA Mus musculus 50 Dync1i1 ENSMUSG00000029757 ENSMUST00000115558,ENSMUST00000115554 2 2 5 83 6 5719717 5719735 TCCCTCTTCGAAATCAGTG 58 5719781 5750783 AGTCGTCTCCTTGTTAATGG 59 NA Mus musculus 50 Dmpk ENSMUSG00000030409 ENSMUST00000032568,ENSMUST00000108475,ENSMUST00000108473,ENSMUST00000108472,ENSMUST00000108474 2 5 6 149 7 19673563 19673581 AATTTCGATGTGGTGGAGG 59 19674339 19676290 GACCTGATTGTCTCTGAAGG 59 NA Mus musculus 50 Tdrd12 ENSMUSG00000030491 ENSMUST00000108043 1 1 2 80 7 36276247 36276265 TTGACCTGTCTGAACTCAG 58 36275120 36276204 GTTTCTTTGAAGAGCCTCTG 58 NA Mus musculus 50 Pde2a ENSMUSG00000030653 ENSMUST00000098240 3 1 4 94 7 108651080 108651098 AGACAAGCAGTGTATCCAG 58 108651365 108656224 TGAAGTTCATGTCCTGCAG 59 NA Mus musculus 50 Acsm3 ENSMUSG00000030935 ENSMUST00000098081,ENSMUST00000106527,ENSMUST00000106528,ENSMUST00000063770,ENSMUST00000106529,ENSMUST00000106526 2 6 6 80 7 126924515 126924534 CCTCATAGAACATCCTTCCA 58 126924576 126927377 AAAGCCTTTACTACCTCTCC 58 NA Mus musculus 50 Rbmx ENSMUSG00000031134 ENSMUST00000033470,ENSMUST00000114730,ENSMUST00000114726 1 3 4 90 X 54641300 54641318 ATAGAGATGGCTATGGTCG 57 54640561 54641247 CGTGAGTTACCATAACTCTC 57 NA Mus musculus 50 Acsl4 ENSMUSG00000031278 ENSMUST00000033634,ENSMUST00000112904,ENSMUST00000112903,ENSMUST00000112907 3 4 4 80 X 138768260 138768278 ACACTACTGGAAGAGTTGG 58 138766912 138768217 GAACTGTATAACCACCTTCC 57 NA Mus musculus 50 Irak1 ENSMUSG00000031392 ENSMUST00000114347 3 1 13 184 X 71262620 71262639 AAAGTGATGAGAGTGTTCCC 59 71260827 71262474 TTCTAAATCCAAGCCTTCCA 58 NA Mus musculus 50 F10 ENSMUSG00000031444 ENSMUST00000063820,ENSMUST00000033821 3 2 2 103 8 13039561 13039582 GAGTTCAAGAAAGGAAATCTGG 59 13039644 13045086 CAGTATTCTTTCGTCTTCTCG 58 NA Mus musculus 50 Birc3 ENSMUSG00000032000 ENSMUST00000013949,ENSMUST00000115674 1 2 4 80 9 7854416 7854434 CTTACTCGATGCAGAAGAC 57 7851159 7854373 AGTGCTAGATCATCTGACTC 58 NA Mus musculus 50 Gnb5 ENSMUSG00000032192 ENSMUST00000076889 1 1 2 102 9 75182016 75182034 GACAAGAACGAGAACATGG 58 75182100 75183467 CTGTCAGAATCTGCATGTC 58 NA Mus musculus 50 Stac ENSMUSG00000032502 ENSMUST00000098332,ENSMUST00000035083 3 2 2 100 9 111465223 111474777 AGAGAACCAGATATGCGTG 59 111465141 111465159 CTACCAGTACATCCAGTGG 58 NA Mus musculus 50 Cck ENSMUSG00000032532 ENSMUST00000060307 2 1 2 165 9 121402602 121402621 GTTAACCTGGACCAGTAGAG 59 121399289 121399307 TTCTTAAGAACGGACATGC 57 NA DesignNoJunction, InUTR Mus musculus 50 Pwp2 ENSMUSG00000032834 ENSMUST00000105392 3 1 2 198 10 77636749 77644333 GACAACCTCATCTTCTCCC 59 77636460 77636590 CTACCTCAATTTCATTCTGTGG 59 NA Mus musculus 50 Nfatc1 ENSMUSG00000033016 ENSMUST00000078049 2 1 2 81 18 80846625 80846643 GTCAGTTTCTATGTCTGCA 57 80832807 80846580 TAATTGGAACATTGGCAGG 57 NA Mus musculus 50 Klrc3 ENSMUSG00000033027 ENSMUST00000053164 2 1 2 110 6 129592118 129592737 GTTTCTCCATATGCTGAACTG 59 129591564 129591582 TGCTGAAGATAGACTGTGG 58 NA Mus musculus 50 Mtap9 ENSMUSG00000033900 ENSMUST00000091014 3 1 2 160 3 82184019 82184037 TTAAAGAGATCCGGTCCCA 59 82184158 82185826 TCTAACCACTCCTGATAAACAG 59 NA Mus musculus 50 Mapkbp1 ENSMUSG00000033902 ENSMUST00000102506,ENSMUST00000066058 3 2 2 80 2 119843380 119843502 CACAGAAGTCTGGAGAAGG 59 119843546 119843564 CCACGTCCATGTCATAGAG 59 NA Mus musculus 50 Zxdc ENSMUSG00000034430 ENSMUST00000113539,ENSMUST00000045740,ENSMUST00000075117 1 3 3 138 6 90328823 90328842 CTAAGAAACATCTGCAGGAC 58 90328943 90331838 TGAGGTACAAGATCTTGGC 58 NA Nonspecific Mus musculus 50 Vps13c ENSMUSG00000035284 ENSMUST00000057972 1 1 6 99 9 67747816 67749271 ATTTAAACTGTCAGGAGGAC 57 67749333 67749351 CTGTGGCAAAGGTATACTG 57 NA Mus musculus 50 Mid1 ENSMUSG00000035299 ENSMUST00000112104,ENSMUST00000112107,ENSMUST00000112108,ENSMUST00000036753,ENSMUST00000112105,ENSMUST00000078947 1 6 7 156 X 166404083 166414865 ATGTTGAAGTCAATGCATCC 58 166419839 166419857 CAGTTTGCAATCTGCTGAG 59 NA Mus musculus 50 Pet2 ENSMUSG00000035395 ENSMUST00000113959,ENSMUST00000113960 2 2 3 86 X 86653381 86653494 AAGTTACCTGAAGAGGTTTCTC 59 86653316 86653334 GACACAGGAGAAGAACCAC 59 NA InUTR Mus musculus 50 Midn ENSMUSG00000035621 ENSMUST00000042057,ENSMUST00000099492 3 2 2 80 10 79617210 79617889 CTTCTCTGGCACACTACAC 59 79617933 79617951 AGTATCTGCAGAATGGTGC 59 NA Mus musculus 50 Hmha1 ENSMUSG00000035697 ENSMUST00000099501,ENSMUST00000105373,ENSMUST00000043311 2 3 3 107 10 79489941 79490292 ATGTGAAGAGTGCTGTCTG 59 79490363 79490381 AAGTCTTGTCCAAAGAGCT 58 NA Mus musculus 50 1100001E04Rik ENSMUSG00000036198 ENSMUST00000114904 3 1 2 147 X 46851803 46852170 CTGATGTAATCCCAGGTCC 59 46852281 46852299 GCAAATTTGCCCTTCTTCC 59 NA Mus musculus 50 Elf1 ENSMUSG00000036461 ENSMUST00000040131,ENSMUST00000110835 2 2 3 122 14 79960623 79960641 TATGCTGGTCTAGCTTGTG 59 79960727 79965279 AGAAGCCTCAACTGTAAGG 58 NA Mus musculus 50 Cab39 ENSMUSG00000036707 ENSMUST00000113360,ENSMUST00000113363,ENSMUST00000097666,ENSMUST00000082149 3 4 4 81 1 87744923 87744943 CCTCAAGCTAATGATGAACCT 59 87744986 87745616 CACAAACACCTTGAACACG 59 NA Mus musculus 50 Klhl13 ENSMUSG00000036782 ENSMUST00000115313,ENSMUST00000035973,ENSMUST00000115319,ENSMUST00000115317,ENSMUST00000115316 2 5 5 81 X 22797975 22805717 GAGTGATGTATATTTCAGGAGG 57 22797915 22797934 CATTTGTCAGTATCAGGGTC 57 NA Mus musculus 50 AY078069 ENSMUSG00000036931 ENSMUST00000108176,ENSMUST00000108175,ENSMUST00000046177 3 3 3 100 7 31211199 31211217 TCCAAGGATGCAGAATTCC 59 31211281 31212102 TGTTGCTCTTGATCTCCTG 59 NA Mus musculus 50 Lphn3 ENSMUSG00000037605 ENSMUST00000072521,ENSMUST00000036068,ENSMUST00000113424,ENSMUST00000113420 1 4 4 80 5 81989902 81989921 GGACAAGTCTCCTACATCTC 58 81989964 82075448 TGTGGTAGAAATCCCTCTG 58 NA Mus musculus 50 Ahdc1 ENSMUSG00000037692 ENSMUST00000105916,ENSMUST00000105915,ENSMUST00000044521,ENSMUST00000105914 3 4 4 87 4 132622121 132622139 AGGACACATTTACCGTCAC 59 132622190 132632917 ATTGCTCTTCTGAAAGCCA 59 NA InUTR Mus musculus 50 Ahdc1 ENSMUSG00000037692 ENSMUST00000105916,ENSMUST00000105915,ENSMUST00000044521,ENSMUST00000105914 2 4 4 85 4 132622123 132622141 GACACATTTACCGTCACCT 59 132622190 132632917 ATTGCTCTTCTGAAAGCCA 59 NA InUTR Mus musculus 50 Ppp1r16b ENSMUSG00000037754 ENSMUST00000052927,ENSMUST00000045503 3 2 3 91 2 158576859 158576879 GATGATTTCAGACATCCACTG 58 158576932 158580895 CTCCAGCTATGTGTAGCAG 59 NA Mus musculus 50 A630055G03Rik ENSMUSG00000037991 ENSMUST00000100183 1 1 2 60 16 10839994 10840013 CGGATCTTTCTGACAATCCT 59 10840036 10840054 TGTAAATCTTCCACCTCCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Aof1 ENSMUSG00000038080 ENSMUST00000037025,ENSMUST00000064564 1 2 2 80 13 47160001 47162818 ACTTTGGGATGAAGGTGAC 59 47162862 47162880 CGCCTTTAAAGGACTTGTC 58 NA Mus musculus 50 Hoxa5 ENSMUSG00000038253 ENSMUST00000048794 1 1 1 60 6 52152750 52152768 GAGCTGGAGAAAGAATTCC 57 52152708 52152727 CTATTTCGATCCTTCTTCGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mtmr7 ENSMUSG00000039431 ENSMUST00000048898 1 1 2 80 8 41643560 41643580 CAGCATCATGTTTATTCCTGC 59 41641877 41643520 TCCATTCTCATTGAGTTCTCG 59 NA Mus musculus 50 Ppp2r4 ENSMUSG00000039515 ENSMUST00000042055 2 1 3 87 2 30287593 30291088 CCAAACTTGATCAGGAAGC 58 30291139 30291157 AGGTAAACTGCCACTTCAG 59 NA Mus musculus 50 Foxp3 ENSMUSG00000039521 ENSMUST00000115740,ENSMUST00000115739,ENSMUST00000115738,ENSMUST00000045566 2 4 4 129 X 7168645 7169295 CTTCCCAGAGTTCTTCCAC 59 7169800 7169820 GATTTCATTGAGTGTCCTCTG 58 NA Mus musculus 50 D330017J20Rik ENSMUSG00000039629 ENSMUST00000046028 3 1 2 82 6 29903446 29905442 GGACCATGATGTTAGTGGT 58 29905487 29905506 ATAAAGTTGTAGCATGGCCT 59 NA Mus musculus 50 Coro7 ENSMUSG00000039637 ENSMUST00000038552,ENSMUST00000090480 3 2 2 91 16 4661907 4668753 AGCATGTAAGGACAAGCAG 59 4655604 4655623 TGTCTCTGTTGTTCTCATGG 59 NA Mus musculus 50 4833442J19Rik ENSMUSG00000039958 ENSMUST00000047531,ENSMUST00000111551 1 2 4 60 6 149095775 149095793 GAGCATCAAAGATCTTGGC 58 149098869 149098888 TTTAGTGTAATCGCCATTCC 57 NA DesignNoJunction Mus musculus 50 Pitpnc1 ENSMUSG00000040430 ENSMUST00000040380,ENSMUST00000059162 1 2 3 94 11 107095664 107095682 AGTGGAACAATTTGTGCAC 59 107073964 107087554 TTGTCATGTCGTACCACTC 59 NA Mus musculus 50 Mthfd1l ENSMUSG00000040675 ENSMUST00000105585,ENSMUST00000043735 2 2 2 81 10 6328106 6329728 TGTGCCCAGTGATATTGAG 59 6328043 6328061 TGCAAGCAATCCTATCTCC 59 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000066420,ENSMUST00000111367 2 2 17 192 2 91002348 91002368 CCGACAGAGAATGTAAATACC 58 91001660 91002194 CAGTCAAGTCAACAGATGC 58 NA Mus musculus 50 Siah1b ENSMUSG00000040749 ENSMUST00000037928,ENSMUST00000071667 2 2 2 216 X 160511246 160511265 ACTCAAGACCTAGAATGACC 58 160509987 160510005 ATAATGCTGTAGCAGCCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Yeats2 ENSMUSG00000041215 ENSMUST00000090052,ENSMUST00000115560,ENSMUST00000041176 3 3 3 81 16 20213453 20214467 ATGCCTGTGAATAAAGTGGT 59 20214508 20214529 CTTGATTTGGAACACTTATGGG 59 NA Mus musculus 50 Rap1gap ENSMUSG00000041351 ENSMUST00000105835,ENSMUST00000047243,ENSMUST00000105834 3 3 6 146 4 137237670 137239393 GGGTGGACAAATCCTTCTC 59 137260077 137265817 CAAACAGATCTGTGTTCTTAGG 58 NA Mus musculus 50 Mbp ENSMUSG00000041607 ENSMUST00000047865,ENSMUST00000091789 1 2 10 119 18 82691507 82691525 CTCAGAGGACAGTGATGTG 59 82723789 82723808 CCTTGCCAGTTATTCTTTGG 59 NA DesignNoJunction Mus musculus 50 Golt1a ENSMUSG00000041717 ENSMUST00000094557,ENSMUST00000097033,ENSMUST00000007433 1 3 3 176 1 135215942 135216740 TTGGAAATCTGCTGTTCCT 59 135216880 135216898 TAATGAAGCCATAGGCCTC 58 NA Mus musculus 50 Abca9 ENSMUSG00000041797 ENSMUST00000066516 1 1 2 88 11 110020363 110024495 ATTCATGAAAGCTCCTTGTG 58 110020294 110020312 CTTGAAAGGCTACAAAGCC 59 NA Mus musculus 50 4833418A01Rik ENSMUSG00000041966 ENSMUST00000064155,ENSMUST00000112167,ENSMUST00000102701,ENSMUST00000064141 2 4 6 85 2 70916148 70916167 CACATGGAATCCTGATTGTG 58 70916215 70916542 CTGTTGCATGAACTGTTCG 59 NA Mus musculus 50 Pbrm1 ENSMUSG00000042323 ENSMUST00000022471,ENSMUST00000022474 2 2 11 141 14 31920482 31930203 AAGCAGAATATGAAGGTGTG 57 31930423 31930441 TGAGGACCAGGATATGGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Frmpd3 ENSMUSG00000042425 ENSMUST00000050767 3 1 2 81 X 136953669 136962141 TAAAGGCAGATCACATGCA 59 136962185 136962204 CTGCCCACATAACTACTCTC 59 NA Mus musculus 50 Adora1 ENSMUSG00000042429 ENSMUST00000086465 2 1 2 249 1 136130711 136130729 TATCAACATTGGGCCACAG 59 136100056 136100074 CTCACTCAGGTTGTTCCAG 59 NA DesignNoJunction Mus musculus 50 Mum1l1 ENSMUSG00000042515 ENSMUST00000113045,ENSMUST00000113043,ENSMUST00000046931,ENSMUST00000113042,ENSMUST00000113041 3 5 6 96 X 135768376 135769047 TGACAGAGGTATCTTCCAG 57 135769107 135769125 TTTATGGCTTATGTGCACC 58 NA InUTR Mus musculus 50 D330038O06Rik ENSMUSG00000043090 ENSMUST00000039786,ENSMUST00000110201,ENSMUST00000098687,ENSMUST00000110197,ENSMUST00000039427 3 5 5 81 8 72290670 72291545 GGAAGAATTCAAAGGCATGTC 59 72290609 72290628 AATCGTATGGCTTGTTTCCA 59 NA Mus musculus 50 Unc5cl ENSMUSG00000043592 ENSMUST00000074574 1 1 2 103 17 48602701 48602719 GATGATAGCAGTAGCCAGC 59 48602786 48602917 TCTTCATTCCCATTGGCTG 59 NA Mus musculus 50 Cage1 ENSMUSG00000044566 ENSMUST00000110233 2 1 3 80 13 38124282 38124302 CAAGACTTCTCCTACTCAGAC 59 38120048 38124241 CTTTGTTTCACTCTGAAGCA 58 NA Mus musculus 50 4933400C05Rik ENSMUSG00000044787 ENSMUST00000054954,ENSMUST00000103076 1 2 2 96 11 103071175 103072059 GAAAGACAGAGTGACCACC 59 103070835 103070853 CTGTCCTTGGTAACTCTGC 59 NA Mus musculus 50 Zfp444 ENSMUSG00000044876 ENSMUST00000108567,ENSMUST00000108566 1 2 3 103 7 6125619 6125637 TTGTTCTTTGACCGAGGAC 59 6135464 6135482 AGGTTTGAGTTACCAGCAC 59 NA DesignNoJunction, InUTR Mus musculus 50 BC023882 ENSMUSG00000045102 ENSMUST00000101334 2 1 3 98 5 34375458 34375477 GAAGGACATTCCCATAGAGC 59 34356987 34375397 ATGGATGTCACATAGCCAG 59 NA Mus musculus 50 Cldn12 ENSMUSG00000046798 ENSMUST00000115446,ENSMUST00000060947,ENSMUST00000115445 2 3 3 153 5 5511078 5511096 GGAGAAACGCTGATTACCT 59 5508327 5508345 CCAGTTAGGAAGCAGAGTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Bex4 ENSMUSG00000047844 ENSMUST00000116527,ENSMUST00000059397 2 2 2 60 X 132674538 132674557 GAAATGTCCGAAGGAAAGTC 58 132674579 132674598 CTATTTGGTATGGCCCAGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Socs4 ENSMUSG00000048379 ENSMUST00000065562,ENSMUST00000111789 2 2 2 60 14 47909686 47909706 CTCAGATTTAGCCTTTAGGTG 58 47909727 47909746 GTTGGGACTCATAGGAACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tob2 ENSMUSG00000048546 ENSMUST00000050467 1 1 1 60 15 81681658 81681676 TCACCTTTACTACTGCCTC 58 81681616 81681635 CCCTTCTTCATCTTAGTGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG622976 ENSMUSG00000048621 ENSMUST00000060013 2 1 1 60 X 106393378 106393399 CAAATCTATGGATGAGCTACCT 59 106393419 106393438 TACATTTCCTGGAAGAGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Insc ENSMUSG00000048782 ENSMUST00000106620,ENSMUST00000060351 1 2 2 80 7 121972711 121978276 CCCTTATCAAACTGTGCCA 59 121978320 121978338 AGAAGGTGATATTGGCGAG 59 NA Mus musculus 50 Zfp2 ENSMUSG00000049321 ENSMUST00000116378,ENSMUST00000077686 2 2 5 163 11 50724024 50724223 CATATGGAATACACAGGGCA 59 50719602 50719620 AACCCAGTCTAGGAGATCC 59 NA InUTR Mus musculus 50 Zfp161 ENSMUSG00000049672 ENSMUST00000112674,ENSMUST00000062369,ENSMUST00000112676 2 3 3 199 17 69734829 69736654 GCCTGAATTGTTCATGGAG 58 69736817 69736835 TCTTAAAGTACGTGCTGCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Tmsb4x ENSMUSG00000049775 ENSMUST00000056887,ENSMUST00000112172,ENSMUST00000112176,ENSMUST00000112175 1 4 4 137 X 163645920 163645939 CGAGAAATTCGATAAGTCGA 57 163645401 163645419 ATGTACAGTGCATATTGGC 57 NA DesignNoJunction, InUTR Mus musculus 50 C77080 ENSMUSG00000050390 ENSMUST00000052602,ENSMUST00000097873,ENSMUST00000106051 1 3 3 129 4 128899160 128899178 CTCTTACTGCTCCATCCAC 59 128898712 128899067 TTCTGTGGATCTGAACCAG 58 NA Mus musculus 50 Plagl2 ENSMUSG00000051413 ENSMUST00000109795,ENSMUST00000056924,ENSMUST00000068166 2 3 3 80 2 153058452 153061551 AGTACAAGCTGTATAGGCAC 59 153058391 153058410 GGTGAAACATCTTGTCACAG 59 NA Mus musculus 50 Nrk ENSMUSG00000052854 ENSMUST00000113052,ENSMUST00000064937 2 2 2 80 X 135538568 135538587 CTATTCTCGAGAATGAGCTG 57 135538629 135541631 CAAAGAACATCTTGTCACCA 58 NA Mus musculus 50 Rnf157 ENSMUSG00000052949 ENSMUST00000100202,ENSMUST00000021144 3 2 4 171 11 116208408 116208669 CTTCAGAAGGAGAGGAGAC 58 116205577 116205595 TTATTGTCACACTCCATGC 57 NA Mus musculus 50 Cntn2 ENSMUSG00000053024 ENSMUST00000086521,ENSMUST00000086522 1 2 2 80 1 134414920 134414938 CAGAGATGAACGTAAGCTG 57 134413649 134414876 CTTTCCAGTAGCGAATCTC 57 NA Mus musculus 50 ENSMUSG00000053178 ENSMUSG00000053178 ENSMUST00000065462,ENSMUST00000115464 1 2 2 60 5 4196412 4196430 GATTTAAGAGGCTGGATGC 58 4196453 4196472 TGAATGAAATCGACTTGAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mapk14 ENSMUSG00000053436 ENSMUST00000114754,ENSMUST00000062694,ENSMUST00000114752 1 3 6 108 17 28865901 28865919 GTTGTTTCCTGGTACAGAC 57 28874026 28878741 GTTTCTTGCAGACTCTGAG 58 NA Mus musculus 50 Hs6st3 ENSMUSG00000053465 ENSMUST00000065904,ENSMUST00000110724 2 2 2 60 14 119537644 119537662 AAAGGTTCAACAAGTGGCT 59 119537685 119537704 TACATGATGACCACGAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Grwd1 ENSMUSG00000053801 ENSMUST00000066438,ENSMUST00000107723,ENSMUST00000098448,ENSMUST00000098449 2 4 4 103 7 53082585 53082604 TGTTAATGTCATCAGCTGGA 59 53081454 53082519 GGGAGCCAGACTTAAACTG 59 NA Mus musculus 50 9430031J16Rik ENSMUSG00000054976 ENSMUST00000113491,ENSMUST00000068297,ENSMUST00000113494 3 3 4 118 1 81265721 81265740 CAGTGAAAGCTCAAGAATGG 59 81265819 81294547 TACTTTAGGTTCTGAGCTGTG 59 NA Mus musculus 50 Lrtm2 ENSMUSG00000055003 ENSMUST00000068351,ENSMUST00000112756 3 2 2 125 6 119270456 119270474 AATTCAAACACTGGCTGGA 59 119267439 119267460 AGTAGTTAAACATCTCCATGGG 59 NA DesignNoJunction Mus musculus 50 Lair1 ENSMUSG00000055541 ENSMUST00000086401,ENSMUST00000108600 2 2 6 82 7 4014681 4014701 TCACTTCATCCAGTTATCCTG 59 3980623 4007522 ATATCAGGCAGAGAACCCT 59 NA Mus musculus 50 1700008F21Rik ENSMUSG00000056018 ENSMUST00000026912 2 1 3 99 8 131634089 131634761 TCAACCAAATAGAGGAGATAGG 58 131634821 131634839 ATGAGCCTTGCAATTTGTG 59 NA Mus musculus 50 Grik2 ENSMUSG00000056073 ENSMUST00000105487,ENSMUST00000105485,ENSMUST00000078692,ENSMUST00000079751 2 4 6 60 10 48852514 48852534 GATTGGTGGCCTTATAGACTC 59 48833416 48852492 ATATGGAGAACCCATGGGA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 OTTMUSG00000001305 ENSMUSG00000057534 ENSMUST00000061938,ENSMUST00000077519 2 2 2 65 11 88826346 88826364 CACTAGTCAGGTAGCAAGG 59 88826299 88826317 ACATCTCCTGTTCTGAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Xlr5a ENSMUSG00000058328 ENSMUST00000078574,ENSMUST00000114520 1 2 4 122 X 70354045 70355274 TTTGAAGAAAGCCAACGAC 58 70353845 70353959 TCTTGATCTTGGGTTTCCA 58 NA Nonspecific Mus musculus 50 Nrf1 ENSMUSG00000058440 ENSMUST00000115212,ENSMUST00000115211,ENSMUST00000115206,ENSMUST00000115209,ENSMUST00000115200,ENSMUST00000115199,ENSMUST00000069808,ENSMUST00000069831,ENSMUST00000004761 3 9 10 80 6 30066223 30066242 CTCATCTCGTACCATCACAG 59 30066285 30067065 CTGTACCAACCTGGATGAG 59 NA Nonspecific Mus musculus 50 Col13a1 ENSMUSG00000058806 ENSMUST00000092484,ENSMUST00000105454 1 2 4 110 10 61424044 61424062 GTCTCCAGGATGTAACTGC 59 61368015 61371434 TGACCTTTGATACCCACAC 59 NA Nonspecific Mus musculus 50 Tnfrsf19 ENSMUSG00000060548 ENSMUST00000111236,ENSMUST00000111234,ENSMUST00000077444 2 3 3 102 14 61624084 61643017 GAGTTGTCCAAGGAATGTG 58 61624000 61624018 GCTTACACTTCTGGAAACC 58 NA Mus musculus 50 Ppm1b ENSMUSG00000061130 ENSMUST00000112307,ENSMUST00000112306,ENSMUST00000112305,ENSMUST00000112304,ENSMUST00000080217 2 5 5 60 17 85402715 85404262 GGGTTGAAGAAATCATGCAG 59 85404285 85404303 ATCACATGGGCAAGATCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Sfmbt2 ENSMUSG00000061186 ENSMUST00000114868,ENSMUST00000114867,ENSMUST00000041105,ENSMUST00000116594 1 4 8 80 2 10367397 10378539 GGAAGTATTTAAGGACCATGC 58 10378580 10378599 TCGCTTATATGCAATGTCTC 57 NA Mus musculus 50 Cxcl12 ENSMUSG00000061353 ENSMUST00000112866,ENSMUST00000073043,ENSMUST00000112871 1 3 3 71 6 117121586 117121604 CTCAACACTCCAAACTGTG 58 117123531 117123549 GTCAATGCACACTTGTCTG 59 NA DesignNoJunction Mus musculus 50 Armc9 ENSMUSG00000062590 ENSMUST00000027434 2 1 3 156 1 88153924 88158623 CACGTCCTCTTCATTTATGGA 59 88170958 88170976 AAAGGCTGGTACGAATTCC 59 NA Mus musculus 50 Eno1 ENSMUSG00000063524 ENSMUST00000051986 2 1 3 190 4 149613649 149613667 TTGAGGTCGATCTGTACAC 58 149615925 149618122 ATTCACTTTCTGAGTGCAC 57 NA Mus musculus 50 Cryba4 ENSMUSG00000066975 ENSMUST00000112385,ENSMUST00000112383,ENSMUST00000086629,ENSMUST00000086631 1 4 4 99 5 112677197 112677215 CTTCCATGTTCAATCTGGG 58 112675760 112675778 CTTGTAGTCACCTGAGTGG 59 NA DesignNoJunction Mus musculus 50 Syt11 ENSMUSG00000068923 ENSMUST00000107505,ENSMUST00000090945 3 2 2 84 3 88552818 88565659 AGGAACATTCAGAAGTGCA 59 88552752 88552770 CCACCACTGTCATTCTCTG 59 NA Mus musculus 50 Nlrp1b ENSMUSG00000070390 ENSMUST00000108516,ENSMUST00000094046 2 2 3 110 11 71041896 71041916 GGGTCAACTAAATTTGAACCC 59 71032012 71041824 TTTGGAATTGTCCCTAGCT 58 NA Mus musculus 50 Crygb ENSMUSG00000073658 ENSMUST00000027090 1 1 1 99 1 65128540 65128558 AGAGTACCCTGACTACCAG 59 65127112 65127133 GTAGATCCTCATTCTGTAAGTG 57 NA DesignNoJunction Mus musculus 50 Pira7 ENSMUSG00000074417 ENSMUST00000070639 2 1 5 60 7 3838378 3838396 GAACCATTGAATCCTCCAC 58 3836020 3838354 TTCTCTGTGGGAATTGGTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Scn9a ENSMUSG00000075316 ENSMUST00000100063 1 1 4 90 2 66381319 66385040 GGACAAAGGATTATGGGAC 57 66381247 66381266 TCTTTCTTCGGTTTCTTCTC 57 NA Mus musculus 50 Rc3h2 ENSMUSG00000075376 ENSMUST00000112936,ENSMUST00000100143 1 2 3 80 2 37230945 37232176 AGACCATGTGATTCTGGAG 58 37230883 37230902 CTAATAGACATTGGACGTGG 57 NA Mus musculus 50 1700113I22Rik ENSMUSG00000075528 ENSMUST00000107257,ENSMUST00000107259,ENSMUST00000107252,ENSMUST00000103102,ENSMUST00000093933,ENSMUST00000080965 2 6 7 98 11 101283263 101285108 AAGGAGGATATAAAGCCTGTG 59 101283185 101283203 ATAATGTTCCACCTGAGCC 59 NA Mus musculus 50 OTTMUSG00000006457 ENSMUSG00000075576 ENSMUST00000100494 2 1 1 60 11 98663280 98663298 TAAACTCAGAACATGGCAG 57 98660506 98660524 ATAACGAGAAGGAAAGGCA 58 NA DesignNoJunction Mus musculus 50 Ifna5 ENSMUSG00000076440 ENSMUST00000107136,ENSMUST00000107135,ENSMUST00000102804 3 3 3 113 4 88481755 88481773 CAATGAAGTCCATCAGCAG 58 88481849 88481868 AAGTATTTCCTCACAGCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Klhl17 ENSMUSG00000078484 ENSMUST00000105569 3 1 2 152 4 155605238 155605256 GAACATGGACATCCATTGC 59 155604780 155605012 GTGTCCATGAATTCACCTG 58 NA Mus musculus 50 G6pc ENSMUSG00000078650 ENSMUST00000019469 3 1 1 64 11 101234076 101234095 CTCTTGCTATCTTTCGAGGA 58 101235904 101235922 CAAGATGACGTTCAAACAC 57 NA DesignNoJunction Mus musculus 50 Psme3 ENSMUSG00000078652 ENSMUST00000019470,ENSMUST00000107268,ENSMUST00000107267 3 3 3 80 11 101178973 101178991 CACTCAGACATGAACCTCC 59 101179035 101180781 CTTGTAAGTGGGACCATCC 59 NA Mus musculus 50 Mup1 ENSMUSG00000078675 ENSMUST00000107483,ENSMUST00000095051 1 2 2 81 4 61179104 61179893 CCATACTGTAAGAGATGAAGAG 57 61179044 61179062 CGTCACAGAATATTCACCA 57 NA Nonspecific Mus musculus 50 A2ARV8_MOUSE ENSMUSG00000078872 ENSMUST00000108970,ENSMUST00000108969,ENSMUST00000108968 3 3 3 138 2 176859063 176868968 GGATTTAGTCACCTATGATGAC 58 176869064 176869291 CCAAATGTAACCTATAGCTGTG 58 NA Nonspecific Mus musculus 50 ENSMUSG00000048936 ENSMUSG00000079351 ENSMUST00000112564 2 1 1 78 19 29860755 29860773 CAGGAAGAACAGCTGAGAG 59 29829464 29829482 TTTGACAAGCTTCTTCTGC 58 NA DesignNoJunction Mus musculus 50 EG653016 ENSMUSG00000079471 ENSMUST00000113529 3 1 1 203 17 45738928 45738946 CAAGAAGTTCAGGCTTCAG 58 45738450 45738468 GAGGACAAAGAGCAGACAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rab7 ENSMUSG00000079477 ENSMUST00000113598,ENSMUST00000113597,ENSMUST00000113596,ENSMUST00000113600,ENSMUST00000095048 3 5 5 90 6 87954227 87954245 CCTTACTTCGAGACCAGTG 59 87950515 87954175 CTTCTGTTTCCTGTTTAAGGG 58 NA Nonspecific Mus musculus 50 ENSMUSG00000054714 ENSMUSG00000054714 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-136 ENSMUSG00000070129 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Pbsn ENSMUSG00000000003 ENSMUST00000000003 1 1 2 82 X 75090409 75093315 AAGAAAGGGACTAAGTGCC 59 75088334 75090363 ATGCTCCCTTCATACTGTG 59 NA Mus musculus 50 Snapin ENSMUSG00000001018 ENSMUST00000001044 1 1 2 81 3 90293511 90294089 TACAGAATGCACAGGAACG 59 90293448 90293466 GAATCCAGCATAGCTCTCC 59 NA Nonspecific Mus musculus 50 Nkx2-1 ENSMUSG00000001496 ENSMUST00000001536 2 1 1 60 12 57634081 57634099 CTATCCCATCTGAACTCCT 57 57634039 57634058 AAAGCAAGGTAGAACAAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Snrpd1 ENSMUSG00000002477 ENSMUST00000002551 1 1 1 110 18 10623697 10626834 CAATCACAGGTGTAGATGTC 57 10626906 10626925 TGTTATTGCCTCGAATACTC 57 NA Mus musculus 50 Jag2 ENSMUSG00000002799 ENSMUST00000075827 3 1 1 81 12 114151935 114152159 CTCTGTGACATCAATCCCA 58 114151872 114151890 AGAAGTCATTGACCAGGTC 58 NA Mus musculus 50 Keap1 ENSMUSG00000003308 ENSMUST00000049567 3 1 1 61 9 21036153 21036171 ACACCGATGAATACCATCC 59 21035840 21035859 GCATAGATACAGTTGTGCAG 58 NA DesignNoJunction Mus musculus 50 Sec14l2 ENSMUSG00000003585 ENSMUST00000003681 3 1 1 81 11 4009196 4009216 TTTATGACTGTGAAGGACTCG 59 4009011 4009154 TCAAACATGGTGAGGAACTC 59 NA Mus musculus 50 Ly9 ENSMUSG00000004707 ENSMUST00000068878,ENSMUST00000004827,ENSMUST00000111277 3 3 3 129 1 173530038 173531122 CTTGTCTACAAGAGACTGGA 58 173529928 173529946 GCATCCATGTGTATGTCAC 58 NA Mus musculus 50 Chmp2b ENSMUSG00000004843 ENSMUST00000004965 2 1 1 89 16 65547155 65547174 AAAGTCACCTCTATGTCCAC 59 65545616 65547103 TTGCATTGTCTTTGCAGTG 59 NA Mus musculus 50 Man2b1 ENSMUSG00000005142 ENSMUST00000034121 2 1 1 80 8 87620940 87621305 GATGACAAATACTGGTCCC 57 87621349 87621367 ATTTCCATAGGCTTCAGTG 57 NA Mus musculus 50 Epha2 ENSMUSG00000006445 ENSMUST00000006614 1 1 1 88 4 140880224 140880242 TCAAGATGCAACAGTACAC 57 140880294 140884337 TTTGATGTCTTCGTTGGAC 57 NA Mus musculus 50 Id3 ENSMUSG00000007872 ENSMUST00000008016 1 1 1 151 4 135700236 135700254 ATCTCCAAGGACAAGAGGA 59 135700872 135700890 TAAGATCGAAGCTCATCCA 57 NA DesignNoJunction, InUTR Mus musculus 50 Crlf1 ENSMUSG00000007888 ENSMUST00000008032 3 1 2 80 8 73023105 73023230 CTCAAGTACAAGCTGAGGT 58 73023274 73023292 GATATGGCATGAGTGAGGG 59 NA DesignNoJunction Mus musculus 50 1700109F18Rik ENSMUSG00000009206 ENSMUST00000009350 3 1 1 60 2 74551774 74551793 GGGAATGTTTCCTCTTACTC 57 74551733 74551752 TATCTTGTAAGCAGTTCCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tex15 ENSMUSG00000009628 ENSMUST00000009772 3 1 2 98 8 34688015 34688034 AATACAGACACTGTTCCCAG 59 34689467 34691996 AGATCCTGTAGTGCTTGGA 59 NA Mus musculus 50 Git1 ENSMUSG00000011877 ENSMUST00000037285,ENSMUST00000100812 2 2 2 83 11 77319495 77319513 TAAAGACAGAGCAGGTCAC 58 77319560 77319694 AACAGGGTACAAAGCTGTC 59 NA Mus musculus 50 4933405L10Rik ENSMUSG00000013158 ENSMUST00000013302 3 1 1 89 8 108232905 108233312 CAAGAGAAAGTCAGAAGTTGAG 58 108233362 108233380 GAGGACAGTGAGGATTCAC 59 NA Mus musculus 50 Ehmt2 ENSMUSG00000013787 ENSMUST00000114033,ENSMUST00000078061,ENSMUST00000114028,ENSMUST00000013931,ENSMUST00000097342 3 5 5 93 17 35040028 35040132 AAGGTGACTTCAGATGTGG 59 35040291 35040310 GGATTATATCTCCTGAGCCC 58 NA Mus musculus 50 Pdcd2 ENSMUSG00000014771 ENSMUST00000054450 3 1 1 81 17 15659812 15659830 CGAATCCAAGGAAGATCAC 57 15658976 15659769 TCTTCCATACCTGAGAATCTG 58 NA Mus musculus 50 Mov10l1 ENSMUSG00000015365 ENSMUST00000109364,ENSMUST00000015509 1 2 2 80 15 88826618 88827112 CTGGATAGAGAATAAAGGGAAGG 59 88827150 88827170 CTAAACTGGTGTGCTTTATCC 58 NA Mus musculus 50 Matn4 ENSMUSG00000016995 ENSMUST00000103104,ENSMUST00000103103,ENSMUST00000059332,ENSMUST00000109360 3 4 8 86 2 164223017 164225244 AAGAATTGTTTGGCCTTGG 58 164222949 164222967 ACAGAAATACGAGTCCACG 59 NA Mus musculus 50 Acot8 ENSMUSG00000017307 ENSMUST00000017451,ENSMUST00000103094 1 2 2 80 2 164621299 164625227 TACTTAAGGGACCCTAACC 57 164621237 164621256 GATCTCAATAGGTACCTCCT 57 NA Mus musculus 50 Crlf3 ENSMUSG00000017561 ENSMUST00000061283 2 1 2 86 11 79862196 79869964 CTGACATTCAGAGTTGAAACTG 59 79862131 79862149 AGATTCGTAGCCATTCTGC 59 NA Mus musculus 50 Tmem49 ENSMUSG00000018171 ENSMUST00000018315 2 1 1 80 11 86420785 86424852 TGTGCTTCTATTCCAAACC 57 86420723 86420741 AAAGAAGGTCCAGAAAGGT 58 NA Mus musculus 50 Dhx40 ENSMUSG00000018425 ENSMUST00000018569,ENSMUST00000081401 2 2 2 80 11 86598428 86598446 ACTGTGAAGATTTGCTGCT 59 86590217 86598384 GGTACTCTGGATCAACAGG 59 NA Mus musculus 50 Agxt2l1 ENSMUSG00000019232 ENSMUST00000072271 2 1 1 83 3 130334268 130334286 CATCGATTTGGTGAAGGAC 58 130334333 130334652 CCCTTTCCTTTCATCTCGT 59 NA Mus musculus 50 Wasf1 ENSMUSG00000019831 ENSMUST00000019975,ENSMUST00000105509 1 2 2 80 10 40640143 40640161 GCATTAAGAACGAACTGGA 57 40640202 40646298 CATACTTACTTAGGCTACTCAG 57 NA Mus musculus 50 Lrriq1 ENSMUSG00000019892 ENSMUST00000020043 2 1 1 85 10 102683924 102683942 GGAAGACGAGAAGAGACAG 59 102680774 102683875 TGTCTTGGTCTTGCTTCTG 59 NA Mus musculus 50 Rfxdc1 ENSMUSG00000019900 ENSMUST00000105477,ENSMUST00000050455 2 2 2 97 10 51433314 51435706 GCCTGAAAGTTTGTTAGCAG 59 51435766 51435784 TATCAATGAGGGCTTCTGG 58 NA Mus musculus 50 Stc2 ENSMUSG00000020303 ENSMUST00000020546 1 1 1 80 11 31267771 31267790 AAATCCAGGGTTTACATGGG 59 31265528 31267729 TGATGAATGACTTTCCCTGG 59 NA Mus musculus 50 Ascc2 ENSMUSG00000020412 ENSMUST00000109932,ENSMUST00000070257,ENSMUST00000109930 2 3 3 80 11 4568362 4568381 AGCTAATGGAGGTGTTTCAC 59 4568423 4568599 CTTGAATGTTGTCACAGCTG 59 NA Mus musculus 50 Arf5 ENSMUSG00000020440 ENSMUST00000020717 3 1 1 83 6 28374363 28374734 CACTATAGGCTTCAATGTGGA 59 28374779 28374797 CGAATCTTATCCTGGCCTC 59 NA Mus musculus 50 Ern1 ENSMUSG00000020715 ENSMUST00000001059,ENSMUST00000106801 2 2 4 126 11 106298426 106320228 AAAGAAGATCCAGTCCTGC 59 106290388 106296235 TAAAGGGAAGTTTCGTCAGG 59 NA Mus musculus 50 Ern1 ENSMUSG00000020715 ENSMUST00000106799 1 1 4 64 11 106320251 106320269 ATGCTGTTAGCAAGAGGAC 59 106320205 106320223 AGAACGATCCGAATTACCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cacng4 ENSMUSG00000020723 ENSMUST00000021066 2 1 1 191 11 107603252 107603270 ATGATTACGACCACGACAG 59 107596618 107598044 TGATATTACTGAGGCCTGC 58 NA Mus musculus 50 Tsen54 ENSMUSG00000020781 ENSMUST00000021134,ENSMUST00000106480 2 2 3 92 11 115683346 115683364 CTTCGATGTTTACCAGGCT 59 115683419 115683905 TCATCAAACCCACTAATGCA 59 NA Mus musculus 50 Ptpn21 ENSMUSG00000021009 ENSMUST00000085116 1 1 1 80 12 99949101 99953246 AGGAGATTACCAGGTATCAG 57 99949040 99949058 CGTGTTCTAATGTACAGGG 57 NA Mus musculus 50 Smoc1 ENSMUSG00000021136 ENSMUST00000110347,ENSMUST00000021564 2 2 2 81 12 82251682 82253666 GTTCGATGGAGATGAAATCAC 59 82253706 82253727 GTTGGTGTTATTCAACTTGGAG 59 NA Mus musculus 50 Sdha ENSMUSG00000021577 ENSMUST00000022062 3 1 1 82 13 74480833 74480851 GGCAGGGTTTAATACTGCA 59 74477148 74480787 CAGCATTGATACCTCCCTG 59 NA Mus musculus 50 Opn4 ENSMUSG00000021799 ENSMUST00000022331 3 1 1 89 14 35410603 35410621 TTCCTCATGTCAGTCACTC 58 35410378 35410550 ATAGAACTCGCAACCTGTC 59 NA Mus musculus 50 Zmynd17 ENSMUSG00000021815 ENSMUST00000022353 3 1 1 81 14 21302859 21303868 CATTCCATCCAGGTTTCCA 59 21302796 21302816 ATCTCATAGTCACGAAGTAGC 59 NA Mus musculus 50 Entpd4 ENSMUSG00000022066 ENSMUST00000064846 3 1 2 109 14 69967320 69967811 TTTCAAAGAGGTAACTCACG 57 69967882 69967901 TACAGCCATATGTTCCTGTG 59 NA DesignRelaxed Mus musculus 50 4930455B06Rik ENSMUSG00000022155 ENSMUST00000045736 2 1 1 80 15 4875713 4880992 TGGTCAATGTTGTCAGACTC 59 4881033 4881053 GTGATGCTTCTTGTGAAACTC 59 NA Mus musculus 50 Bcl2l2 ENSMUSG00000022194 ENSMUST00000022806 3 1 2 115 14 55503555 55503573 AAAGAAATGGAGCCTTTGG 58 55504222 55504240 TATAGAGCTGTGAACTCCG 58 NA DesignNoJunction Mus musculus 50 Parvg ENSMUSG00000022439 ENSMUST00000023074 3 1 1 82 15 84171344 84171776 GTCAACCCTGAAGATATTGTG 58 84171820 84171838 CTCAGTGAATGCTTCTGGA 59 NA Mus musculus 50 Rpl24 ENSMUSG00000022601 ENSMUST00000114450,ENSMUST00000023269 1 2 2 96 16 55967200 55967218 GAGTCAGCATTCCTTTCCA 59 55967277 55969635 TTTGAATTTCTTCCGACTGC 59 NA Nonspecific Mus musculus 50 Ptk2 ENSMUSG00000022607 ENSMUST00000110036,ENSMUST00000110033,ENSMUST00000080736,ENSMUST00000068756,ENSMUST00000057684 2 5 5 80 15 73151541 73156190 TTCTATCAACAGGTGAAGAGTG 59 73151482 73151500 ACAACCCAACTTCAAAGCT 59 NA Mus musculus 50 Cldnd1 ENSMUSG00000022744 ENSMUST00000023426 3 1 1 106 16 58729767 58729785 GTTCTGTTCCGATACAACG 58 58729854 58731427 ACATCAAATGACTCTGTCCT 58 NA Mus musculus 50 Pak2 ENSMUSG00000022781 ENSMUST00000023467 3 1 1 80 16 32031780 32033883 TTCTTGGACAGTTACCTGG 58 32031718 32031736 TACAACATCAGTGAGGGAC 58 NA Mus musculus 50 Btg3 ENSMUSG00000022863 ENSMUST00000023570 2 1 1 79 16 78365099 78365117 ATGAAGACACAAGCAAGGA 59 78360775 78365057 TTCTGAAATCTGGTACACGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 ORF9 ENSMUSG00000022938 ENSMUST00000049721 3 1 1 81 16 97697390 97697409 AAGTTCATTCAGAGCACTCC 59 97696974 97697346 CTTGAGCCTTCAGTTTGGA 59 NA Mus musculus 50 Slc4a8 ENSMUSG00000023032 ENSMUST00000023776 3 1 1 94 15 100626288 100626306 TTCCTGTTCCTGTACTGTG 58 100626364 100626949 GACTCAATCGCACTTATGC 58 NA Mus musculus 50 Rgn ENSMUSG00000023070 ENSMUST00000023832 3 1 1 81 X 20129615 20134643 GAGATACTTTGCTGGTACCA 59 20134687 20134705 AAAGAGGGAGTACAAGGAC 58 NA Mus musculus 50 Sult1c2 ENSMUSG00000023122 ENSMUST00000023886 3 1 1 82 17 53972542 53976242 GGACAAACAACTGTAAGTTCC 59 53972480 53972498 GCTCATCCTGTAGAAGTGG 59 NA Mus musculus 50 Nfatc4 ENSMUSG00000023411 ENSMUST00000024179 2 1 1 107 14 56449394 56449412 CTGCCAGACTCTAAAGTGG 59 56450539 56450796 AGTCAATGTCACCTCACTG 59 NA Mus musculus 50 Celsr3 ENSMUSG00000023473 ENSMUST00000024238 2 1 1 82 9 108739937 108739955 CTGCAACTGTGATGTTCAC 59 108740001 108740310 GATAGTGGAACTCCTTGCA 58 NA Mus musculus 50 Nfya ENSMUSG00000023994 ENSMUST00000046719,ENSMUST00000078800 3 2 2 83 17 48531365 48531674 AATGGTCATGATGGTACCAG 59 48531301 48531319 TCTTCTTCCAGCATCTCTG 58 NA Mus musculus 50 Tmprss3 ENSMUSG00000024034 ENSMUST00000114549,ENSMUST00000024833 1 2 2 123 17 31325404 31326092 TGTTTATGACCTGTACCACC 59 31325300 31325318 CTTTGGCTTGTACTTGCTG 59 NA Mus musculus 50 Ehd3 ENSMUSG00000024065 ENSMUST00000024860 1 1 1 168 17 74165736 74169824 CTTCCTGAACAGGTTTGTG 58 74176530 74176548 TAGGATAATTCGGTCCACC 58 NA Mus musculus 50 Smad2 ENSMUSG00000024563 ENSMUST00000025453,ENSMUST00000091831 2 2 2 80 18 76459634 76461738 ACAAGAAGACATATAGGAAGGG 59 76461779 76461797 TGCACTATCACTTAGGCAC 59 NA Mus musculus 50 Ms4a8a ENSMUSG00000024730 ENSMUST00000025636 3 1 1 83 19 11142258 11142873 TACAACAATCCAGGTGTGG 59 11142193 11142211 ACTTGGTATTGGGTTTGGT 59 NA Mus musculus 50 Aldh1a7 ENSMUSG00000024747 ENSMUST00000025656 2 1 1 80 19 20774434 20774454 GAGTCTTCACTAAAGACCTGG 59 20770887 20774392 AATAGCAGTTCACCCACAC 59 NA Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000041717,ENSMUST00000111662,ENSMUST00000086848,ENSMUST00000061496,ENSMUST00000078917,ENSMUST00000111659,ENSMUST00000111651,ENSMUST00000111649,ENSMUST00000111653,ENSMUST00000111656 2 10 15 153 19 55817316 55817564 GGAAAGTTTGGAAGAAGCG 59 55817680 55892265 CATCTGAAGATAGGTTCGGG 59 NA Mus musculus 50 Prim1 ENSMUSG00000025395 ENSMUST00000026461 1 1 1 80 10 127463629 127464112 TGTCCCAACTATAAGTGCC 58 127464156 127464174 TCAGCTTCATTCTCCTCCT 59 NA Mus musculus 50 Paip1 ENSMUSG00000025451 ENSMUST00000109203,ENSMUST00000026520 2 2 2 84 13 120226947 120229569 CTTATCTACCAACAGGCCA 58 120229617 120229635 TTGTCAGATGATGGGACAG 58 NA Mus musculus 50 Hras1 ENSMUSG00000025499 ENSMUST00000026572,ENSMUST00000093979,ENSMUST00000097957 1 3 3 80 7 148378515 148378744 TGATCCCACTATAGAGGACTC 59 148378455 148378473 GCTGTGTCTAAGATGTCCA 58 NA Mus musculus 50 Cd151 ENSMUSG00000025510 ENSMUST00000106000,ENSMUST00000058746 2 2 2 80 7 148655549 148655847 TACGCTTGTACTTCATCCTG 59 148655888 148655908 GCTGATAATAGACATAGGCCA 59 NA Mus musculus 50 Lypla1 ENSMUSG00000025903 ENSMUST00000027036 2 1 1 174 1 4820388 4822402 GCCTTCTTGGTTTGATATCG 58 4829470 4829488 GTATAAAGACAAGGCGCCT 59 NA Mus musculus 50 Rb1cc1 ENSMUSG00000025907 ENSMUST00000027040 1 1 1 80 1 6224416 6224437 TTGAAGAGTCTCTTATGATGCC 59 6224476 6228358 CAACGTCATACATTTCCACTG 59 NA Mus musculus 50 Pip5k3 ENSMUSG00000025949 ENSMUST00000114042,ENSMUST00000097708,ENSMUST00000081154,ENSMUST00000097707 3 4 4 80 1 65268885 65268905 GTTGGTTGGATTGTGTTAGTC 59 65268945 65270088 ATTCTGTACTCTGAAGTGGTC 59 NA Mus musculus 50 Il18r1 ENSMUSG00000026070 ENSMUST00000087983,ENSMUST00000097771 2 2 2 80 1 40535385 40537777 GGCTGTATAAGAACTGTAAGGA 59 40537818 40537836 AGTAGTAGCCCTCATCTCC 59 NA Mus musculus 50 Fbxo3 ENSMUSG00000027180 ENSMUST00000028603,ENSMUST00000111135,ENSMUST00000111136,ENSMUST00000102565 2 4 4 83 2 103891342 103891360 AGTGTCCACATCGTTTCTG 59 103891405 103893533 GACATTTCAATCCTGATTCGG 59 NA Mus musculus 50 Chst1 ENSMUSG00000027221 ENSMUST00000065797 1 1 2 157 2 92451966 92453303 GTTGAATTCCAGAAGACCC 58 92453424 92453442 CAAGTGTGGAAAGACTTGG 58 NA InUTR Mus musculus 50 Hdc ENSMUSG00000027360 ENSMUST00000028838 1 1 1 81 2 126430101 126432103 TCTTACAGAGCACTGTCAG 58 126430038 126430056 CATGCTTTCATTGCTAGGA 57 NA Mus musculus 50 2410001C21Rik ENSMUSG00000027502 ENSMUST00000029005,ENSMUST00000109132 2 2 2 257 2 172291778 172291796 CAAAGAAACCGAAGACAGC 59 172294183 172294203 TGGTGAAGATAGACTTGTAGG 58 NA DesignNoJunction Mus musculus 50 Edn3 ENSMUSG00000027524 ENSMUST00000029030 1 1 1 82 2 174587254 174587272 CGTGCTTCACTTACAAGGA 59 174587318 174604098 CACAGTCTGTTCAGGAGTG 59 NA Mus musculus 50 Samhd1 ENSMUSG00000027639 ENSMUST00000109550,ENSMUST00000057725,ENSMUST00000088523,ENSMUST00000109549,ENSMUST00000099138 3 5 5 80 2 156952577 156955600 AGATCTGGGAGTAAGTTCC 57 156952515 156952533 AGATCAATCCGAGACTGAC 58 NA Mus musculus 50 Kcnc4 ENSMUSG00000027895 ENSMUST00000009617 1 1 1 91 3 107248408 107248426 GACAGAAACAAGAAGGCAG 58 107242382 107248353 TCAACATTGCCTTCTTTCC 58 NA Mus musculus 50 Ndst3 ENSMUSG00000027977 ENSMUST00000106420,ENSMUST00000029602,ENSMUST00000106419,ENSMUST00000106418 1 4 4 84 3 123255591 123259720 GGGATTGATTGGTACATGG 57 123255525 123255546 GGAAGTAATTAGCACTCTTCTC 58 NA Mus musculus 50 Orm3 ENSMUSG00000028359 ENSMUST00000006687 3 1 1 81 4 63017737 63017953 TATCACACCAAAGATGACCA 58 63017997 63018015 CATACTTGAAGAGGGTCCC 59 NA Mus musculus 50 Gpatch3 ENSMUSG00000028850 ENSMUST00000030662 1 1 1 119 4 133134240 133135709 CTCAGAAGAGGACGATGAC 59 133135789 133135810 CACTTAAGTTCAATCTCCTCCT 59 NA Mus musculus 50 Mtf1 ENSMUSG00000028890 ENSMUST00000106193,ENSMUST00000106191,ENSMUST00000030723 1 3 3 80 4 124482291 124482310 ATGCCAAGAAACATTGAAGG 59 124482352 124497460 GTACCGCTTTACTTCTTTCC 58 NA Mus musculus 50 Dffa ENSMUSG00000028974 ENSMUST00000030816,ENSMUST00000103216 3 2 2 105 4 148491699 148491891 CCAGAAAGAGTCCAAAGCT 59 148491960 148491978 GGTAAGGATCTGGCTTCTG 59 NA Mus musculus 50 Nmnat1 ENSMUSG00000028992 ENSMUST00000030845,ENSMUST00000105693 2 2 2 143 4 148847509 148847527 AAGAAGAAAGGGCTCATCC 59 148843882 148847402 CTGATGGTATCTGAGCACC 59 NA Mus musculus 50 Gabrb1 ENSMUSG00000029212 ENSMUST00000031122 1 1 1 80 5 72500005 72500024 ACTGATTACAATCCTGTCCT 58 72500067 72513197 GTAGTGATTCCTAGTGCGA 58 NA Mus musculus 50 Cxcl9 ENSMUSG00000029417 ENSMUST00000113093,ENSMUST00000031365 2 2 2 62 5 92754158 92755777 ATTGCTACACTGAAGAACG 57 92754114 92754132 CTTCTTCACATTTGCCGAG 59 NA DesignNoJunction Mus musculus 50 Limk1 ENSMUSG00000029674 ENSMUST00000015137,ENSMUST00000100642,ENSMUST00000111233 3 3 3 80 5 135140180 135141089 ATTCCTCAAGGAGGTAAAGG 58 135140119 135140137 TTGTCCTTGTAGAGCACTC 58 NA Mus musculus 50 Mkrn1 ENSMUSG00000029922 ENSMUST00000031985,ENSMUST00000051671,ENSMUST00000114822 1 3 4 148 6 39360200 39370101 GCAGATACTTTATGCATGGG 58 39355944 39360089 CTTGCTGTGTTCGTATCTG 58 NA Mus musculus 50 Eif4e3 ENSMUSG00000030068 ENSMUST00000032151 3 1 1 103 6 99589161 99589180 ATGAAAGTTCCCAAGGACAG 59 99582394 99586108 ATGATCTCGTCATCTGCTG 59 NA Mus musculus 50 Dmpk ENSMUSG00000030409 ENSMUST00000032568,ENSMUST00000108475,ENSMUST00000108473,ENSMUST00000108472,ENSMUST00000108471,ENSMUST00000108474 2 6 6 83 7 19672976 19672994 AGATGTTCTATGGGCAGAC 58 19673041 19673359 ACAAGTGTTCCCTGTAGTG 59 NA Mus musculus 50 Mesp1 ENSMUSG00000030544 ENSMUST00000032760 2 1 1 97 7 86937795 86937813 TTCCTGTACGCAGAAACAG 59 86937443 86937461 GTTTCTAGAAGAGCCAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Syt3 ENSMUSG00000030731 ENSMUST00000032980 3 1 1 83 7 51641424 51641445 TACCAATGATAGGTGTCAAGAG 59 51641489 51645881 AGGCTCACGGAAATATCTG 59 NA Mus musculus 50 Prss8 ENSMUSG00000030800 ENSMUST00000098016 1 1 3 95 7 135069917 135069935 CATCCTGTCTTCAGCTCAG 59 135069839 135069858 TTCAAGCCAAGACAAGAGG 59 NA Mus musculus 50 Fgf3 ENSMUSG00000031074 ENSMUST00000033392,ENSMUST00000105898 2 2 2 118 7 152024830 152026593 ATAGCATCCTGGAGATTACTG 58 152026673 152028491 GTTGTAGTGATCCGAAGCA 59 NA Mus musculus 50 Timm17b ENSMUSG00000031158 ENSMUST00000033498,ENSMUST00000115651 3 2 2 165 X 7478094 7478112 CGAATTGTGGATGATTGCG 59 7480853 7483205 CAAAGCTTCCTCCAATCTG 58 NA DesignRelaxed Mus musculus 50 Slc38a5 ENSMUSG00000031170 ENSMUST00000115591,ENSMUST00000033512,ENSMUST00000115590 2 3 3 80 X 7856121 7856230 GTTTATTGGGTCCACTTCAG 58 7856272 7856291 ACCTCAGTAGGTACAATACG 58 NA Mus musculus 50 Arhgap6 ENSMUSG00000031355 ENSMUST00000033721,ENSMUST00000112131,ENSMUST00000112127,ENSMUST00000112126 1 4 6 80 X 165739697 165739716 AGGAGCCTTTCAATATCTGG 59 165739758 165740257 CATAAGAGCCTGTCATTCCT 59 NA Mus musculus 50 Kir3dl1 ENSMUSG00000031424 ENSMUST00000113105,ENSMUST00000033799 3 2 2 81 X 133059701 133059719 GCTTCCATCCTCAATATGC 58 133059764 133060941 GGCTTCATGTAGATTCCTG 57 NA Nonspecific Mus musculus 50 Cntnap4 ENSMUSG00000031772 ENSMUST00000034225,ENSMUST00000079307 2 2 2 80 8 115382183 115383015 CTTCGTGGAGATTGATGAG 57 115383059 115383077 ACCAAAGATTTGACTGCAC 58 NA Mus musculus 50 Ccl17 ENSMUSG00000031780 ENSMUST00000034232 1 1 1 100 8 97335115 97335134 TGCCTGGATTACTTCAAAGG 59 97335197 97335671 ACAGTCAGAAACACGATGG 59 NA Mus musculus 50 Abcb10 ENSMUSG00000031974 ENSMUST00000075578 1 1 1 80 8 126484182 126485907 ACCCTAATTCTGGAACAGTC 59 126484121 126484139 TCCCAATCTTGGATCTCAG 58 NA Mus musculus 50 Srpr ENSMUSG00000032042 ENSMUST00000034541 2 1 1 103 9 35023387 35023529 ATTGATGACAAGGTGGGAG 59 35023596 35023614 TTAAGACTGCGTAGGTCAC 59 NA Mus musculus 50 Olfm2 ENSMUSG00000032172 ENSMUST00000034692 2 1 1 104 9 20477147 20477165 ATCTCCAGTATGTTCGCAG 59 20476789 20477079 CCTTCAGTTCCTGAAAGCT 59 NA Mus musculus 50 Tcf12 ENSMUSG00000032228 ENSMUST00000034755,ENSMUST00000113549,ENSMUST00000064957 3 3 3 92 9 71706353 71706372 AACCTCCTTCATCAGATGAC 59 71704334 71706299 CATTGGTACTGCTTGTTCTG 59 NA Mus musculus 50 Tspan3 ENSMUSG00000032324 ENSMUST00000034876,ENSMUST00000098723 2 2 2 100 9 55995262 55995280 ATCATAGCTGTAGGAGCCT 59 55994954 55995198 AGGATGAAGACAAACGTGG 59 NA Mus musculus 50 2310046A06Rik ENSMUSG00000032355 ENSMUST00000034910 3 1 2 135 9 77038142 77038160 CAGACAATGTTGGGTTCTG 58 77012685 77021768 TTACTCCAGGCTTAGTCAG 57 NA Mus musculus 50 Aste1 ENSMUSG00000032567 ENSMUST00000035181 1 1 1 82 9 105305914 105307340 CTAACTTGGTTGTACAACGG 58 105307385 105307403 CTCAGGAGGCTTTCTACAG 59 NA Mus musculus 50 Glt25d2 ENSMUSG00000032649 ENSMUST00000044311 3 1 1 80 1 154351264 154351283 GCATCAGTTTAAGAGGAAGC 58 154351324 154353931 CCGATGTAAATTAGTTCCCAG 58 NA Mus musculus 50 Ank2 ENSMUSG00000032826 ENSMUST00000043741,ENSMUST00000090335,ENSMUST00000043779 2 3 5 80 3 126751146 126751166 CTATGGGAATGTAAATGTGGC 59 126749728 126751104 GGAGTGATTCCATTCCTGG 59 NA Mus musculus 50 Emr4 ENSMUSG00000032915 ENSMUST00000025004 1 1 1 80 17 55959956 55959974 TCACCATCATCAATGTCCT 58 55960018 55982485 TATATTCCATCCGCACCTG 58 NA Mus musculus 50 Rasgrp2 ENSMUSG00000032946 ENSMUST00000113476,ENSMUST00000113475,ENSMUST00000113472,ENSMUST00000035716,ENSMUST00000113471 3 5 5 80 19 6402507 6402525 CGCATGTTTCTCATGATGC 59 6402568 6403036 GGATTGCTGATAGAAGTGGA 59 NA Nonspecific Mus musculus 50 Pfkm ENSMUSG00000033065 ENSMUST00000051226 1 1 1 80 15 97962131 97962356 GACTTTGAACACCGAATCC 58 97962400 97962418 AATCTCGTACTTGGCTAGG 58 NA Mus musculus 50 Ptprf ENSMUSG00000033295 ENSMUST00000049074,ENSMUST00000106394 3 2 2 82 4 117884477 117884580 CTTGAGTTCAAGTTGCTGG 58 117884413 117884431 TTCTTGAACTTGTTGCAGG 58 NA Mus musculus 50 Otud7a ENSMUSG00000033510 ENSMUST00000058476 2 1 1 143 7 70880825 70899526 AGAGAACAAGCTGTGATCC 59 70899802 70899820 TTCTAGGGACAGGATGAGG 59 NA Mus musculus 50 AW554918 ENSMUSG00000033632 ENSMUST00000097643 1 1 2 91 18 25362467 25448447 AGAAAGGGAAGCTCTTCAG 58 25448502 25448520 TAAGCTTCTCTTGCTGCTC 59 NA Mus musculus 50 Gadd45gip1 ENSMUSG00000033751 ENSMUST00000036734 2 1 1 74 8 87358181 87358200 CCAGGAACTATTACAGGACC 59 87358237 87358255 TCCTTCTTCTGTCGTTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Asb13 ENSMUSG00000033781 ENSMUST00000042288 2 1 1 76 13 3648755 3649442 AAAGACACCTCTTAGCCTC 58 3649482 3649500 CTTTCTCTAGTCCTCGGAC 58 NA DesignNoJunction Mus musculus 50 Gm239 ENSMUSG00000034057 ENSMUST00000048229 1 1 1 80 10 116259788 116259806 GCAACATGAAAGTGATGGG 59 116254836 116259744 CATTTGTGTCAACCTCCTG 58 NA Mus musculus 50 Ktelc1 ENSMUSG00000034064 ENSMUST00000036210 3 1 1 81 16 38545879 38545899 AATGTCCGAGATTATCCTCAG 59 38543029 38545837 GGTACTCCGATGTCTTACTG 59 NA Mus musculus 50 Zdhhc5 ENSMUSG00000034075 ENSMUST00000035840,ENSMUST00000111645 3 2 2 85 2 84532548 84532566 GACCAGAAGTGTCAGATGG 59 84532158 84532501 TCCTTTAGACTTAGTCCTCCT 59 NA Mus musculus 50 Senp6 ENSMUSG00000034252 ENSMUST00000037484 1 1 1 80 9 79951505 79951524 GAATACCCACCTTATGTCCA 58 79951564 79959131 CTTCATTATATGGTCTCCACCT 59 NA Mus musculus 50 Elmod2 ENSMUSG00000035151 ENSMUST00000053902 1 1 1 80 8 85846655 85853022 TCCAAGAATAAGGTCCTACAG 58 85846595 85846613 TTCCTTCATGATGTTCGCT 59 NA Mus musculus 50 Ints6 ENSMUSG00000035161 ENSMUST00000053959 2 1 1 80 14 63328454 63332537 GAATTCTCCAACACTACCAC 58 63328393 63328411 TCAATAACCATTGGCTCAC 57 NA Mus musculus 50 Tubg1 ENSMUSG00000035198 ENSMUST00000043680 2 1 1 87 11 100984048 100984741 GTCTAGAGGGATTTGTACTGTG 59 100984789 100984807 CTGTCATTTAGCCGTTCCA 59 NA Mus musculus 50 Nfkbiz ENSMUSG00000035356 ENSMUST00000114457,ENSMUST00000114458,ENSMUST00000036273 1 3 4 80 16 55815802 55815821 CTAAGGAATAAGAGCCTGGT 58 55814453 55815759 ACTCTTACGATCCTTTGCC 59 NA Mus musculus 50 Trpm8 ENSMUSG00000036251 ENSMUST00000113114,ENSMUST00000040210 3 2 2 80 1 90276379 90276397 CAAGATCAACACGAAAGCC 59 90277569 90281248 AGGTCGTTAAGCTTTGAGTC 59 NA Mus musculus 50 P2ry12 ENSMUSG00000036353 ENSMUST00000050360 2 1 1 82 3 59024008 59024148 CACAGAAGAACACTCAAGG 57 59023944 59023962 GTGACTTGCATAAGTTCCC 58 NA InUTR Mus musculus 50 Gpr101 ENSMUSG00000036357 ENSMUST00000057645 1 1 1 60 X 54754874 54754893 CCTATTAGTGTAGCTCACGG 59 54754833 54754851 CTACACCAAGGATGACGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Arhgap21 ENSMUSG00000036591 ENSMUST00000114594,ENSMUST00000045258,ENSMUST00000114592 3 3 3 80 2 20774689 20776574 GGAGATGTATCAGATTCAGCT 59 20771977 20771996 CCTGCTATACTGATCCTTCC 59 NA Mus musculus 50 Dennd3 ENSMUSG00000036661 ENSMUST00000043414 2 1 1 80 15 73397588 73398862 TATGGTGTTGTACAGTCCAC 59 73398905 73398923 CATCTTTCGGATGCTTCAG 58 NA Mus musculus 50 Cyb561d2 ENSMUSG00000037190 ENSMUST00000041459 1 1 1 88 9 107443850 107443869 GCTTTACCATCTTTGTTGCT 59 107442708 107443343 GAAGGAGAAAGCCAGAGAC 59 NA Mus musculus 50 Vnn1 ENSMUSG00000037440 ENSMUST00000041416 3 1 1 80 10 23620681 23620699 GCAGATGAGGTTTATGCCT 59 23620743 23623203 CAGGATGCAGATCTGTAGG 59 NA Mus musculus 50 Phc3 ENSMUSG00000037652 ENSMUST00000046624 2 1 2 80 3 30847672 30847690 TGTACAGTCTGACATCCCT 59 30841561 30847631 GTTAAATTCTGAACCTGAGCAG 59 NA Mus musculus 50 Ppm1k ENSMUSG00000037826 ENSMUST00000042766 1 1 1 80 6 57465018 57465037 AAGGAGTATCGGAGATTTGG 58 57464060 57464976 GCATGGTAGAGCTTAATCCT 59 NA Mus musculus 50 Socs1 ENSMUSG00000038037 ENSMUST00000038099 1 1 1 82 16 10784340 10784358 GACTACCTGAGTTCCTTCC 58 10784276 10784294 AAGAAATAATAAGGCGCCC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ptpdc1 ENSMUSG00000038042 ENSMUST00000035824 2 1 1 80 13 48686070 48687868 GTATACTCATCCTGGGTCAC 58 48686009 48686028 GATGATGCGATACTTCTCCA 59 NA Mus musculus 50 Crygn ENSMUSG00000038135 ENSMUST00000047119 3 1 1 276 5 24262088 24263645 GAAAGATCACTCTGTACGAGG 59 24260075 24260093 TCTATGCGGAAATGCTCTC 59 NA DesignNoJunction Mus musculus 50 Tcte2 ENSMUSG00000038347 ENSMUST00000053376 3 1 2 74 17 13850186 13850987 AATTCTAAGAACCAGGTGACC 59 13850132 13850150 CTACCCATTCTCCAAGCTG 59 NA DesignRelaxed Mus musculus 50 Tmepai ENSMUSG00000038400 ENSMUST00000109115,ENSMUST00000036248 1 2 2 282 2 173059886 173059904 TATGATTACGTGCCTGCTG 59 173053710 173053728 ATCAGACAGTGAGATGGTG 58 NA DesignNoJunction Mus musculus 50 Scaf1 ENSMUSG00000038406 ENSMUST00000085383 1 1 1 83 7 52258990 52260787 GGACACTGACAAGTACCTG 59 52258925 52258943 TGGTAGTATGGCTTGATGG 58 NA Mus musculus 50 Dock10 ENSMUSG00000038608 ENSMUST00000077946,ENSMUST00000097681,ENSMUST00000057520 3 3 3 80 1 80569112 80570063 CCCATGAAGTGTATTTATGGGA 59 80569053 80569072 TTGAGAATGGTGTAGCACAG 59 NA Mus musculus 50 Nfe2l1 ENSMUSG00000038615 ENSMUST00000081775,ENSMUST00000107658,ENSMUST00000107655,ENSMUST00000107659,ENSMUST00000048638,ENSMUST00000107657,ENSMUST00000107656 1 7 7 97 11 96682630 96682648 CTATCTCCTCTTCTGACGG 58 96681817 96682569 TTTACTTCCATAGCCTGCA 58 NA Mus musculus 50 Tm6sf1 ENSMUSG00000038623 ENSMUST00000041890 1 1 1 80 7 89018651 89018671 AGAAGACCGTTTGACTTAGTG 59 89018713 89020618 CAAAGCAATCAAGCCTCTG 59 NA Mus musculus 50 Rtel1 ENSMUSG00000038685 ENSMUST00000054622,ENSMUST00000098971,ENSMUST00000048608,ENSMUST00000108815,ENSMUST00000108814 1 5 7 80 2 181083946 181083964 TTCGTACCCTTATCCTCAC 58 181084008 181084181 AGACTGGGAATGGAATCTG 58 NA Mus musculus 50 Elovl3 ENSMUSG00000038754 ENSMUST00000043739 2 1 1 91 19 46207665 46207683 CCAGACCTACATGAGAACG 59 46207735 46208501 TACCCAGGATACTGAATATTGC 59 NA Mus musculus 50 Zfp653 ENSMUSG00000038895 ENSMUST00000043922 1 1 2 129 9 21862113 21862256 CCAAGAAAGAGAAGGAGGA 58 21862002 21862020 TCTTCTCCATCCACTTCTG 58 NA Nonspecific Mus musculus 50 Stx11 ENSMUSG00000039232 ENSMUST00000042861 1 1 1 129 10 12664031 12664049 GAATGAGGTGTCTTCACAC 58 12661750 12661768 CAATTCTTGAAGCTCTGCA 58 NA DesignNoJunction, InUTR Mus musculus 50 Uhrf1bp1 ENSMUSG00000039512 ENSMUST00000114849,ENSMUST00000097359,ENSMUST00000088043 1 3 3 70 17 28017106 28017124 CAAGTTGACCTTCCTCCTG 59 28017158 28017176 ACTTCATCATCGCCTTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc25a28 ENSMUSG00000040414 ENSMUST00000046038 3 1 1 99 19 43740313 43741417 CATATTGCCAATGGTGCAG 59 43739104 43739123 AGTTGTACATCTGCATCCTC 59 NA Mus musculus 50 4921522P10Rik ENSMUSG00000040467 ENSMUST00000048606 3 1 1 60 8 8663324 8663342 AATGCTAACCAGTTTGGTC 57 8663366 8663384 ATTTGGAGCTGTTAGTGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Eif4h ENSMUSG00000040731 ENSMUST00000078220 1 1 2 136 5 135097950 135101247 CTGATGACAGAGGCTACAG 59 135097832 135097850 TCTGAAGTCCATGTTGGAG 58 NA Mus musculus 50 3300001G02Rik ENSMUSG00000040767 ENSMUST00000039601 1 1 1 80 11 32108338 32108356 TATGTATGGCGGACATACC 58 32108400 32108694 GATGCCATAATCTCTGAGC 57 NA Mus musculus 50 Nbeal1 ENSMUSG00000041003 ENSMUST00000035569 3 1 1 80 1 60281565 60287454 AGAACTGCAAGGTATTCCAG 59 60287496 60287515 AACTCTTCATCACTGCTGTC 59 NA Mus musculus 50 Slc7a13 ENSMUSG00000041052 ENSMUST00000035890 1 1 1 81 4 19751132 19751151 AACTGTCGTGTACTTACTGG 59 19751195 19766379 AGCAACAGCATCTGAAGAG 59 NA Mus musculus 50 Gpr45 ENSMUSG00000041907 ENSMUST00000039328,ENSMUST00000114761 1 2 2 60 1 43090027 43090045 GATCAAGAAATTCCGCGAG 58 43090069 43090087 AGGGAGGATTTGGAAAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rnpep ENSMUSG00000041926 ENSMUST00000077340,ENSMUST00000074357 1 2 2 80 1 137174108 137175355 GCTCTTATTGAGGTTCCAG 57 137174046 137174067 GAAGAACTTATTTGGTCCTCTC 58 NA Mus musculus 50 Mfsd9 ENSMUSG00000041945 ENSMUST00000039672 1 1 1 80 1 40838279 40838297 ATCTGACTGAACTGGATGG 58 40831383 40838235 AGACTAGACCAGCATTGAG 58 NA Mus musculus 50 Pigs ENSMUSG00000041958 ENSMUST00000048073 1 1 1 80 11 78150324 78151304 GACTCTCAGATCCTATACTATGC 59 78151344 78151362 CATAGCCAAGGAGTAGCTG 59 NA Mus musculus 50 S100a10 ENSMUSG00000041959 ENSMUST00000045756 3 1 1 151 3 93364960 93364978 CTTGACAAAGGAGGACCTG 59 93368238 93368258 CTAGTGATAGAAAGCTCTGGA 58 NA DesignNoJunction Mus musculus 50 Rptn ENSMUSG00000041984 ENSMUST00000045912 2 1 1 127 3 93198923 93198941 TTCTCAACGTAAGCAAGGT 59 93199032 93199433 ATCATTTGGTCTCCGAAGG 59 NA Mus musculus 50 Mat2b ENSMUSG00000042032 ENSMUST00000101347,ENSMUST00000040167 2 2 3 81 11 40493690 40494172 AGCCACTTAAGACCTATTACTG 59 40493630 40493648 CCAATTTGGAGCAATCGAG 59 NA Mus musculus 50 Olfr1414 ENSMUSG00000042849 ENSMUST00000062353 2 1 1 60 1 94407820 94407838 CTCTTCATGTATGTGAGGC 57 94407778 94407797 CAGAGATGAGTTTGTTGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1260 ENSMUSG00000042894 ENSMUST00000111512,ENSMUST00000061830 3 2 2 60 2 89818647 89818666 CTGTGCCTCCCATATTACAG 59 89818688 89818707 AAGGTAAACGAATATGCAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Sbk1 ENSMUSG00000042978 ENSMUST00000056028 3 1 1 109 7 133433523 133433541 TTACCAAGCACTATGAGCT 58 133434567 133434585 ATTCACAAATTTCAGGGCC 58 NA DesignNoJunction Mus musculus 50 A830010M20Rik ENSMUSG00000044060 ENSMUST00000100951,ENSMUST00000112671 3 2 4 60 5 107939775 107939795 GTTTCTTCCACAGATTGTTCG 59 107939817 107939835 GCTGAGTTTCCAATTCCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG329541 ENSMUSG00000044083 ENSMUST00000055893 3 1 1 112 2 153613386 153613405 CTTCATCAGGATCATGAAGG 57 153613480 153614901 CATACTTCTGCCAAGTGAC 58 NA Mus musculus 50 Olfr868 ENSMUSG00000044106 ENSMUST00000050227 3 1 1 60 9 19905385 19905405 CCGATGTATTTCTTCCTCTCC 59 19905426 19905445 CTGTTGTAGAAATGAAGCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp758 ENSMUSG00000044501 ENSMUST00000088764 1 1 3 82 17 22511814 22511840 GTCCATGAGGAATATCAAACTG 58 22511883 22511901 AAGGTGTACTTTGACTGGA 58 NA Mus musculus 50 Cd300d ENSMUSG00000044811 ENSMUST00000061637,ENSMUST00000092464 1 2 2 76 11 114861957 114861975 TTGAGTTGTCTGTGGTTCC 59 114859606 114859626 GGATTCCAGGATATCTCTACC 58 NA DesignNoJunction Mus musculus 50 C230013L11Rik ENSMUSG00000045873 ENSMUST00000056274 3 1 1 60 17 28313632 28313652 ACAGCATTATGAAGGATGGAG 59 28313592 28313610 TACTGCAGGGAGAATTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ard1b ENSMUSG00000046000 ENSMUST00000060265 3 1 1 68 5 97820894 97820913 CCAAGTACTATGCTGATGGT 59 97820845 97820864 GCTCATCAGTCATCTGAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC087945 ENSMUSG00000046034 ENSMUST00000059662 1 1 1 80 15 27541384 27546089 AGCTCATACTGTTACCAGAG 58 27541323 27541342 TCCCATCAAATTTCAGTCCA 59 NA Mus musculus 50 Olfr1444 ENSMUSG00000046272 ENSMUST00000059675 1 1 1 60 19 12936367 12936386 TCATCTACCTTGTCACTCTG 58 12936408 12936427 GAATCCGAGAAGATGATGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ppargc1a ENSMUSG00000046379 ENSMUST00000053488 2 1 1 60 5 51847173 51847192 GGAGTCACTAAACTTTGGAG 57 51847132 51847151 CCAAACAGTAAATGCATCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 BC022623 ENSMUSG00000046546 ENSMUST00000059078 2 1 1 60 16 30601700 30601718 ACATCACTTCCTCTGTCAG 58 30601741 30601760 TAATAAGCTGTGACAGTTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 1810007E14Rik ENSMUSG00000046804 ENSMUST00000094697 3 1 2 225 2 118603489 118603507 CTGTCATGAGGGACATCAC 59 118603758 118603777 GATTTCTCAGTGATGTGGAC 58 NA DesignNoJunction, InUTR Mus musculus 50 Hectd3 ENSMUSG00000046861 ENSMUST00000050067 3 1 1 80 4 116675404 116675544 AATTTCACCAATGAGGACC 57 116675587 116675606 GTAAATGTAGATCCGAGCAG 57 NA Mus musculus 50 1110002N22Rik ENSMUSG00000046909 ENSMUST00000050207 3 1 1 103 11 79950770 79951428 CTGGAAGAGATTTCTTCAGTC 58 79950687 79950707 AGTATAGGAAGCAGAGATGTG 58 NA Mus musculus 50 Smgc ENSMUSG00000047295 ENSMUST00000072327,ENSMUST00000100293,ENSMUST00000088555,ENSMUST00000051539 2 4 6 142 15 91672445 91672463 TCTGTTAGGTTACCTGGGA 59 91672938 91674793 CACTTGAGTCACCTGACAG 59 NA Mus musculus 50 Rexo1 ENSMUSG00000047417 ENSMUST00000057910,ENSMUST00000038670,ENSMUST00000051918 1 3 3 100 10 80012961 80012979 AGTATGACGTGGAAGACCT 59 80012879 80012897 GACCCTAGCATCTTGAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lxn ENSMUSG00000047557 ENSMUST00000058981 3 1 1 83 3 67264893 67264911 TAATGTGGCAGAATTCGAC 57 67262563 67264846 AGTCATCGTTTCTTTGCAC 58 NA Mus musculus 50 4930539E08Rik ENSMUSG00000048905 ENSMUST00000062357 1 1 1 87 17 29042435 29042648 ACTGGAAGAAGAGCAAGTG 59 29042366 29042384 CTCCTGGGATTTCTTCCTG 59 NA Mus musculus 50 Gm534 ENSMUSG00000049178 ENSMUST00000051102 3 1 1 62 14 49501442 49501460 GAATCTGTGCAAAGATGGT 58 49501398 49501416 TGTTTCTCTTGGAAGACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trappc1 ENSMUSG00000049299 ENSMUST00000102602,ENSMUST00000060956,ENSMUST00000102601 1 3 4 86 11 69137752 69137908 GGAAGAGGAGTACAAGCTG 59 69137958 69138334 CCATCCTTCATGTCTAGCG 59 NA Mus musculus 50 4921525H12Rik ENSMUSG00000049565 ENSMUST00000062935 1 1 3 92 3 108559785 108560159 CTGACCAACTGAAGAATAAGG 58 108560210 108568037 CCTTGTTCATCAGTCTTATGTC 58 NA Mus musculus 50 Bdp1 ENSMUSG00000049658 ENSMUST00000038104 3 1 1 80 13 100819639 100819658 TGTTTGTACCTGTTGGTCTC 59 100816782 100819597 TGGTTATCTCAAGCTCTTCC 59 NA Mus musculus 50 V1rf2 ENSMUSG00000050102 ENSMUST00000060603 2 1 1 60 17 21398762 21398780 CATCACAATCAGCAACAGG 59 21398804 21398822 GAACTTGGATGATTTGGCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cdh20 ENSMUSG00000050840 ENSMUST00000062528 2 1 1 80 1 106850646 106867404 AACAACTCAATCAGGTACTCC 59 106867444 106867464 TAGAGCACCTGTTGTAATGTC 59 NA Mus musculus 50 March10 ENSMUSG00000050879 ENSMUST00000049995 2 1 1 114 11 105233256 105233274 ATGAACTCAGGCTTGTACC 59 105225857 105233181 GGTAATTTCTTGACAACCTCTC 58 NA Mus musculus 50 Olfr1325 ENSMUSG00000051706 ENSMUST00000054541 3 1 1 60 X 71840362 71840380 AATCCATCCAACTAAGGCC 59 71840404 71840422 CACAATCAAGTGAGAGGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000052629 ENSMUSG00000052629 ENSMUST00000064591 3 1 1 112 7 85723850 85723871 GATCTGAATGACACTCATTTGG 59 85723944 85723962 CAAGAAGGAGCAATAGGCT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Prkg1 ENSMUSG00000052920 ENSMUST00000065067,ENSMUST00000073581 1 2 2 80 19 30646165 30653115 ACATTCAGAAACACAAGTGG 58 30646104 30646123 TTGGAATTATGGGAGGTGTC 59 NA Mus musculus 50 Nebl ENSMUSG00000053702 ENSMUST00000100384 2 1 4 85 2 17301435 17301453 AAACCTATAAGGCCACTCC 58 17298334 17301386 ATAATAAACCGCACTCAGC 57 NA Mus musculus 50 NP_001025461.1 ENSMUSG00000053773 ENSMUST00000066387 3 1 1 91 9 20627220 20627757 ATGTGCTAGTGAACAATGC 58 20627812 20627830 AAAGTTGGTGTTGAACACG 59 NA Mus musculus 50 Mill1 ENSMUSG00000054005 ENSMUST00000066780 2 1 1 80 7 18848482 18848501 CTTGGATGACATATGTCCTG 57 18848543 18849943 TTTGGGAAACCTGTATTCAG 57 NA Mus musculus 50 ENSMUSG00000054061 ENSMUSG00000054061 ENSMUST00000098303 1 1 2 184 7 100228565 100228583 AAACCGAAGGGTATGAAGG 59 100201529 100228418 TCAAGATCTAATGAGCTCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Iigp1 ENSMUSG00000054072 ENSMUST00000032473,ENSMUST00000066912 3 2 2 60 18 60550336 60550359 CTAGTGAATATCATCCCTTCTCTG 59 60550376 60550396 TCTTCAGAGTCTCCAAATCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1810037I17Rik ENSMUSG00000054091 ENSMUST00000106429 1 1 1 68 3 122627494 122627512 GAAACACTCCTACTGGCTG 59 122627544 122627562 TACACGAAGACGAACAAGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Gzmm ENSMUSG00000054206 ENSMUST00000020549 3 1 1 108 10 79156910 79156928 ATGATCTCCAAGATCCTGG 58 79156999 79157106 CGTCTATCTAGCTTAAGCAG 57 NA Mus musculus 50 Ceacam2 ENSMUSG00000054385 ENSMUST00000044547,ENSMUST00000066503,ENSMUST00000064862 2 3 3 170 7 26305891 26305909 ATCATAACTGGAGCTGTGG 59 26303196 26304187 GTCATCCACCTTGTTAGGA 58 NA Mus musculus 50 Rnd1 ENSMUSG00000054855 ENSMUST00000109149,ENSMUST00000003451 1 2 2 80 15 98506962 98506981 AATTACACAGCCTGTTTGGA 59 98504370 98506922 GTCATAGTAAGGAGAACCTGAG 59 NA Mus musculus 50 A430033K04Rik ENSMUSG00000056014 ENSMUST00000032590,ENSMUST00000069862 2 2 2 65 5 139077492 139077510 AGAACTATAGGAGCCTGGT 58 139080664 139080682 CCAACTTGGAGATCAACTC 57 NA DesignNoJunction Mus musculus 50 D830013O20Rik ENSMUSG00000056359 ENSMUST00000070425 3 1 1 107 12 74472467 74497324 AAGACCAAGTTGTAAGGAGC 59 74472379 74472397 GTAGATGGTTCCTTTGGCT 59 NA InUTR Mus musculus 50 Higd1c ENSMUSG00000056487 ENSMUST00000075675,ENSMUST00000088142 2 2 3 96 15 100183688 100183706 GTTTCCCATGTTTCTGCTG 59 100183765 100183784 ATTGTATATCATGGCGAACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ptprn2 ENSMUSG00000056553 ENSMUST00000070733 3 1 2 81 12 118508052 118508073 GCTAAAGAGATTGATATCGCAG 59 118508115 118515041 CAAACTGCTCCTTTGTCTG 58 NA Mus musculus 50 Zfp558 ENSMUSG00000056712 ENSMUST00000034647 2 1 1 60 9 18261111 18261129 ATGAATGTTCTCAGTGTGG 57 18261069 18261087 CTATTATGTCCAGTGAGCG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rbm4 ENSMUSG00000056951 ENSMUST00000006628 2 1 1 129 19 4788036 4792409 CAGAGTTTCAAGGCAAACG 59 4787925 4787943 ATTGGACACTCTTTGGACC 59 NA Mus musculus 50 Txnl4a ENSMUSG00000057130 ENSMUST00000025464 3 1 1 84 18 80404046 80404064 GAAGATGGACGAGGTTCTG 59 80415470 80415490 AGGCACTTCTGTAATATCCAC 59 NA DesignNoJunction Mus musculus 50 Saa2 ENSMUSG00000057465 ENSMUST00000075982,ENSMUST00000094404 2 2 2 220 7 54008849 54008867 CAAATACTTCCATGCTCGG 58 54009465 54009483 ACTCTCAGTATTTGGCAGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Cyb5d2 ENSMUSG00000057778 ENSMUST00000087640,ENSMUST00000079681 2 2 2 114 11 72596327 72602588 GTATTTGTCGGAAGACTGGT 59 72596232 72596250 GTTCCTGTTCATTTGCCTC 59 NA InUTR Mus musculus 50 Panx2 ENSMUSG00000058441 ENSMUST00000096304 3 1 2 152 15 88899310 88899329 GTGCATCCCTATATCCTAGG 58 88899444 88899972 GTGGAGCATTTCTTTGGTG 59 NA Mus musculus 50 Rnase11 ENSMUSG00000059648 ENSMUST00000076106 3 1 1 60 14 51669623 51669641 GAATCAGCAAACTCAACCC 59 51669581 51669600 TCACATGTTTGGATATGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Suv420h2 ENSMUSG00000059851 ENSMUST00000098853,ENSMUST00000108582,ENSMUST00000076059,ENSMUST00000108583 1 4 4 87 7 4697528 4697684 ATACCTGTGAGAGGAAAGG 57 4697735 4697753 AGCTCATACTTGTCTAGGG 57 NA Mus musculus 50 Olfr960 ENSMUSG00000059867 ENSMUST00000077060 3 1 1 61 9 39431461 39431479 TCTATGGACCAGTCATCGT 59 39431504 39431522 AATTGCACTAAGCAATGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ptp4a3 ENSMUSG00000059895 ENSMUST00000053232 1 1 1 203 15 73582268 73582286 GATCTCACTGGACTTGGTG 59 73582453 73584199 TACTTCTTCAGGTCCTCGA 59 NA DesignRelaxed, InUTR Mus musculus 50 Zfp128 ENSMUSG00000060397 ENSMUST00000081891 3 1 1 65 7 13470071 13470089 TGTATCGTGATGTGATGCT 58 13470118 13470389 GTTTGGGAAGATCAGGACC 59 NA DesignNoJunction Mus musculus 50 Ddhd2 ENSMUSG00000061313 ENSMUST00000033975,ENSMUST00000098860 1 2 2 80 8 26849986 26850006 GACTTGAAGAAGCTTCAACTC 59 26848771 26849945 ACATAAAGCCAGAGCTTCTC 59 NA Mus musculus 50 Kalrn ENSMUSG00000061751 ENSMUST00000114973,ENSMUST00000076810,ENSMUST00000074924,ENSMUST00000114968,ENSMUST00000099959,ENSMUST00000114961 3 6 13 80 16 34049998 34053653 ATGAGATGTCGTCTTTGCT 58 34049936 34049955 TTTCTATTGCACTGACAAGG 58 NA Nonspecific Mus musculus 50 Olfr99 ENSMUSG00000061972 ENSMUST00000077585 3 1 1 61 17 37417256 37417275 TTATCTACTTGCTGGGTCTC 58 37417214 37417232 GACATCAGTGCCAATAGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Serpinb2 ENSMUSG00000062345 ENSMUST00000009356,ENSMUST00000064916 2 2 2 80 1 109419320 109419338 GACTTCCTTGAATGTGCTG 58 109419381 109419655 GTTTGGGATTTCACCTTTGG 59 NA Mus musculus 50 Tmem65 ENSMUSG00000062373 ENSMUST00000110159,ENSMUST00000072113 1 2 2 139 15 58654465 58654483 CGACTTCATCTACAGCCTG 59 58625956 58628768 GGAAGAATACATATCTCAGCTG 58 NA DesignRelaxed Mus musculus 50 Olfr527 ENSMUSG00000062782 ENSMUST00000072606 2 1 1 60 7 147521783 147521801 CACTGAGTTCCTCATCCTG 59 147521825 147521843 GAAGAGAAGAGGTACCCGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tas2r110 ENSMUSG00000062952 ENSMUST00000082014 1 1 1 60 6 132818106 132818125 AGGAAATGGATTCATAGCAC 57 132818147 132818166 TGAAATGCTTCTTCTCTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nol7 ENSMUSG00000063200 ENSMUST00000071926 1 1 1 81 13 43496779 43496881 GGACTACTGTAAACAAGTTCCT 59 43496923 43496941 GTGCTAGTCAGAAACTGGG 59 NA Mus musculus 50 9830134C10Rik ENSMUSG00000064147 ENSMUST00000087942 1 1 1 152 17 29282927 29282945 CAAGATGGACTGTGAGGAG 59 29284366 29285144 TGCATCTTAAGTGACCGAG 59 NA Mus musculus 50 mmu-mir-199b ENSMUSG00000065554 ENSMUST00000083620 2 1 1 60 2 32174003 32174023 TACCCAGTGTTTAGACTACCT 59 32174045 32174063 ACCAATGTGCAGACTACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rps13 ENSMUSG00000066362 ENSMUST00000085049 3 1 1 60 7 95679058 95679076 TAAATTCCGCCTGATTCTG 57 95679016 95679035 AGTCTTATAGTATCGAGCCA 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Serpinb7 ENSMUSG00000067001 ENSMUST00000112710,ENSMUST00000086690 1 2 2 80 1 109346834 109346853 CTTGAGCTCCAATATCATGG 58 109346895 109348200 CAGCTTGCTTTCAATTTCAC 58 NA Mus musculus 50 Asb18 ENSMUSG00000067081 ENSMUST00000086882,ENSMUST00000097656,ENSMUST00000113098 3 3 3 60 1 91911041 91911059 GTACAGAAGCTGATCTGCA 59 91910999 91911020 CATTAGCAAGTTCTATTACGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tspan6 ENSMUSG00000067377 ENSMUST00000087557 1 1 1 80 X 130429598 130429989 CAAGATCCAAAGTACGTTGC 59 130429537 130429558 CCTGTTTCTGAGTAATAGTTCG 58 NA Mus musculus 50 Olfr1424 ENSMUSG00000067528 ENSMUST00000087830 3 1 1 60 19 12134169 12134187 CCAAAGTCAGCAAGTAAGC 59 12134127 12134145 AGTTGTCACATACACCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cma2 ENSMUSG00000068289 ENSMUST00000089555 3 1 1 149 14 56592115 56592529 GTATACATGGGAGACTCTGG 58 56592641 56592659 CTTGCCCTCTATGACTCTG 59 NA Mus musculus 50 Olfr742 ENSMUSG00000068431 ENSMUST00000089836 1 1 1 60 14 51135098 51135116 TGGAGATCTGGTATGTCAC 58 51135140 51135158 GTGTCTGAAAGGAAGTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hist1h2bn ENSMUSG00000069268 ENSMUST00000105106 2 1 1 183 13 23665854 23665872 TGAACTCGTTTGTGAACGA 59 23665689 23665707 CTGGTGTACTTGGTGACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dazap1 ENSMUSG00000069565 ENSMUST00000105362,ENSMUST00000092305,ENSMUST00000105361 3 3 3 109 10 79736785 79737203 CACTCAAGAGACTCTACGC 59 79737276 79737294 ACTTGACAAATCCAAAGCC 58 NA Mus musculus 50 NM_001011810.1 ENSMUSG00000070411 ENSMUST00000094105 2 1 1 60 7 115302786 115302804 CTGTTCTGATGTGAGTGTC 57 115302744 115302762 CATAGAGATCGAACCAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:2442344 ENSMUSG00000070689 ENSMUST00000094609 1 1 1 199 1 128425321 128592271 AGTCTTGTGGAATACATGGAC 59 128425142 128425160 CTTGACTGTCCAAGGACTG 59 NA InUTR Mus musculus 50 ENSMUSG00000070717 ENSMUSG00000070717 ENSMUST00000094662 3 1 1 229 4 131630685 131630703 TTCAGTTACGTAAGGACCC 58 131630896 131630914 TTCTGGAGTCACAAAGTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 A430090E18Rik ENSMUSG00000070868 ENSMUST00000038455 1 1 1 80 4 111928490 111950162 AGTATTGTCCTAACAGTCCC 58 111950202 111950223 CAGGATCACACTAATATCTTCC 57 NA Mus musculus 50 3830408D24Rik ENSMUSG00000071001 ENSMUST00000095109 3 1 1 106 4 43740329 43740347 TTTCCACAGATCACAGGAG 58 43740417 43740435 GATGGTGAACAAGTCTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000071302 ENSMUSG00000071302 ENSMUST00000079272 2 1 1 88 13 66139447 66139667 CTTCTATAGGCTACAAATGGG 57 66140911 66140929 CCTATGACTTCTTCCATGC 57 NA Nonspecific Mus musculus 50 Dtnb ENSMUSG00000071454 ENSMUST00000101637,ENSMUST00000077930,ENSMUST00000057982 1 3 3 109 12 3589219 3589238 GCAGCTCTTCATAGAAATGC 59 3591977 3596657 CAAGATGAAGGTTGCATCG 59 NA Mus musculus 50 V1rh18 ENSMUSG00000071490 ENSMUST00000095960 3 1 1 60 13 22975843 22975862 CTTCTTGCAAAGAGATTGCC 59 22975802 22975823 CATCTAGGAAGTTTCTCAAACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Akr1c19 ENSMUSG00000071551 ENSMUST00000081326 2 1 1 98 13 4235495 4236292 CTACAAAGCTTTGGTGCAC 59 4236352 4236372 GATAGAGGTCAGCATAATCCA 58 NA Mus musculus 50 Ttc9c ENSMUSG00000071660 ENSMUST00000096751 3 1 2 81 19 8886325 8890360 CAATAGGCAACCTAAAGATGC 59 8886264 8886282 CTCCTTCCTATGGTAGCTG 58 NA Mus musculus 50 ENSMUSG00000072579 ENSMUSG00000072579 ENSMUST00000100658 2 1 1 60 15 55763206 55763225 AGTCTTGTCATCCTCTACCA 59 55763248 55763266 CAAAGAACAAAGAGCAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 4930428D18Rik ENSMUSG00000073085 ENSMUST00000101419 3 1 1 83 X 73641477 73641495 TTGCTGTATTGCACATAGC 58 73641541 73642469 CAGTGAATATTCAGCAACCT 57 NA InUTR Mus musculus 50 Prr16 ENSMUSG00000073565 ENSMUST00000116639,ENSMUST00000097576 2 2 2 60 18 51277685 51277704 TGGAGGATCTGGAATTAGTC 58 51277726 51462265 ACCTCCTTAAGTTCTTTGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073682 ENSMUSG00000073682 ENSMUST00000088499 3 1 1 60 4 154988440 154988458 AGACAGAGTAGTGATGAGG 57 154988398 154988416 AGATGCTCTTGATTCACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 4931408C20Rik ENSMUSG00000073722 ENSMUST00000097801 2 1 1 60 1 26740138 26740156 CTCCACCTACACTTCTGAG 58 26740096 26740114 CATTCTTCTTGCTGGTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1700029G01Rik ENSMUSG00000073758 ENSMUST00000094760,ENSMUST00000097891,ENSMUST00000027786 1 3 3 80 4 125829628 125829650 GCCTAAATCATCTCTACCTACTG 59 125829488 125829588 GGTGTTGAAAGTGTCTTGG 58 NA Mus musculus 50 Ttpa ENSMUSG00000073988 ENSMUST00000098245,ENSMUST00000098244 2 2 2 80 4 19951033 19955563 TAAGGACCGGATTCATCTG 58 19955606 19955625 TATTCCCGAGGAAGAATGTC 58 NA Mus musculus 50 7420426K07Rik ENSMUSG00000074123 ENSMUST00000098460 3 1 1 95 9 98803946 98803964 GACTTGGAATACGCCTCTC 59 98804020 98804041 ACCATCTAGTGAAGAAGATGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bcl2a1b ENSMUSG00000074145 ENSMUST00000068569 1 1 1 60 9 89094578 89094597 CAATAACACAGGAGAATGGA 57 89094617 89102440 CTTCTTTATGAAGCCATCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 4930579C12Rik ENSMUSG00000074146 ENSMUST00000098484 3 1 1 188 9 89072692 89072710 TTTGCCCAAAGTACATGTC 58 89066670 89069325 TTGTAAATATGTTCCGGCG 58 NA InUTR Mus musculus 50 EG622139 ENSMUSG00000074196 ENSMUST00000098551 3 1 1 108 3 144542783 144552552 GCATGAAGGAAATGGTGAC 59 144542693 144542712 CTGTCTTTCCAACTCTCAGG 59 NA Mus musculus 50 Zfp568 ENSMUSG00000074221 ENSMUST00000074322 2 1 1 85 7 30802212 30802230 GTCTCCCTTCTAGAACAGG 58 30802279 30807252 GTCCTAGACACCCAATCAG 59 NA Mus musculus 50 EG667283 ENSMUSG00000074304 ENSMUST00000098717 3 1 1 80 7 23545500 23547294 TGAGGCTCAGAAGATTTCC 58 23547338 23547356 AGGAGGAGAAGTACCATGG 59 NA Nonspecific Mus musculus 50 9530015I07Rik ENSMUSG00000074472 ENSMUST00000091508 2 1 1 77 9 22001879 22003879 GTGCTCATGTAGAACAGAG 57 22003920 22003938 GTTTAAGAGCTGGAAGCTG 58 NA DesignNoJunction Mus musculus 50 ENSMUSG00000074573 ENSMUSG00000074573 ENSMUST00000099064 1 1 1 60 3 68212292 68212313 GTAGGGAAAGGTACATTCAGAG 59 68212334 68212352 GATTCTCAAACCCTGTGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rdh1 ENSMUSG00000074640 ENSMUST00000073639 3 1 1 96 10 127201835 127201853 AAGATGATCTGGGACAAGG 58 127202387 127202406 TCTTGTCCAATTCGTTTAGG 57 NA DesignNoJunction Mus musculus 50 ENSMUSG00000074728 ENSMUSG00000074728 ENSMUST00000099256 2 1 1 60 3 5214856 5214875 GAGTTGTTCTTGAACTGGAG 58 5214898 5214916 CCAAGTCGCTAATAATGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 1810034E14Rik ENSMUSG00000074861 ENSMUST00000099440 3 1 1 89 13 64367849 64368338 GGAGAAACACTTTGACCCT 59 64368390 64368409 CTTACAACGACAGACATGGA 59 NA InUTR Mus musculus 50 Chrm5 ENSMUSG00000074939 ENSMUST00000099589 2 1 1 60 2 112320586 112320604 CACTCGACTATGTAGCCAG 59 112320544 112320562 CGATCAAAGCTAATCACCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075240 ENSMUSG00000075240 ENSMUST00000099954 3 1 1 77 19 5740183 5740202 AGTGAAGGGAAGTAATGAGG 58 5740125 5740143 CAAGACTCATTGCAGTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bex6 ENSMUSG00000075269 ENSMUST00000058964 3 1 2 126 16 32184056 32184077 TCTGTTGGAATCTACAGAAGAC 59 32184163 32186280 GACAGTGCCAATTTGTAGTC 59 NA InUTR Mus musculus 50 ENSMUSG00000075295 ENSMUSG00000075295 ENSMUST00000100033 1 1 1 98 10 22124539 22124557 TTCTTTGTGGACCTCTGTC 59 22124619 22124637 GAGACTGTGTTCCTGAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A630010A05Rik ENSMUSG00000075395 ENSMUST00000100165 3 1 1 97 16 14589477 14609738 CCATAAAGCCTCCATCTGAG 59 14609795 14609816 TAATCTTTCCTTGAGGTACTGG 59 NA Mus musculus 50 D730005E14Rik ENSMUSG00000075541 ENSMUST00000100430 2 1 1 64 15 79721288 79721307 TGTACAAGGGTCATAGTGTG 59 79721243 79721261 ATAGGGAAATGGATCCGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRBV13-2 ENSMUSG00000076469 ENSMUST00000103270 1 1 1 60 6 41071752 41071770 AAGCCAAGAGAACTTCTCC 59 41071793 41071812 GTACACTGATGTCTGAGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRBV17 ENSMUSG00000076474 ENSMUST00000103275 1 1 1 60 6 41113473 41113494 CCTAACAATTCTTTCTGCTCTC 59 41113514 41113533 ACATGGCAGAATACTCTAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHD ENSMUSG00000076616 ENSMUST00000103424 2 1 1 88 12 114652543 114652562 ACTTGACACTTACACATGTG 58 114647847 114652492 TGGTAGCATCACTAATTGC 57 NA Mus musculus 50 IGHV1S5 ENSMUSG00000076726 ENSMUST00000103535 1 1 1 62 12 116745891 116745910 GGATTGGAATGATTCATCCT 57 116745848 116745866 CCTTGCTCTTGAACTTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Klhdc7a ENSMUSG00000078234 ENSMUST00000105031 1 1 1 60 4 139523422 139523443 CTTACAAACTCTACAAGTCCAG 58 139523383 139523401 TCCTTGTTGTTTCTCCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001091447.1 ENSMUSG00000078661 ENSMUST00000107319 2 1 2 60 4 73548561 73548579 CTGGAAAGGATCTTCGACC 59 73548214 73548538 AATTATACAGAGCACCTGGA 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Fcgbp ENSMUSG00000078775 ENSMUST00000098633 2 1 1 221 7 28944525 28944543 TGGCTGCTTCTACAATGAC 59 28947782 28947800 CCATCAAAGGTGATGAGGT 59 NA DesignNoJunction, InUTR Mus musculus 50 Trim71 ENSMUSG00000079259 ENSMUST00000111816 2 1 1 116 9 114424937 114424955 GAACAGGTGGAGATGAAGG 59 114423203 114424857 GATCTTCTCCACCTTCCAC 59 NA DesignRelaxed Mus musculus 50 Trappc2 ENSMUSG00000079317 ENSMUST00000116495,ENSMUST00000112196,ENSMUST00000112194 3 3 4 138 X 162884827 162887731 AATCCAAAGATGATCACCGT 59 162887831 162887850 AAGGCTGATACAAACCACTC 59 NA Mus musculus 50 Nat6 ENSMUSG00000079334 ENSMUST00000093785 1 1 1 60 9 107486110 107486128 CTCAAAGCCCACTAGAGAC 59 107486151 107486170 TCCATCCAGAATATAGGGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 St3gal6 ENSMUSG00000079552 ENSMUST00000023427 1 1 1 77 16 58507600 58507619 CTCCTCACTACATTCTTCAG 57 58503341 58503359 GAACTGACTTGTCATTCCC 58 NA DesignNoJunction Mus musculus 50 NP_001095927.1 ENSMUSG00000079636 ENSMUST00000115188,ENSMUST00000115189 3 2 3 134 X 34885097 34885115 ACCATAGATTCACCCAGTG 58 34887080 34888245 GAAACCATCTCTTCACTATGG 58 NA Nonspecific Mus musculus 50 MGI:2147116 ENSMUSG00000079729 ENSMUST00000115767 2 1 1 62 17 6822284 6822302 ATTCTTGATAGTGCGAGCA 59 6821834 6822258 TTTAACCTGAGATCCACGT 58 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 NP_001103384.1 ENSMUSG00000080033 ENSMUST00000116148 1 1 1 62 6 134934187 134934208 CAAGATTCAGAAACTGTCAGAG 59 134934231 134934249 TCACTAAGTTCATCCAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1300007F04Rik ENSMUSG00000000686 ENSMUST00000093352 3 1 3 74 11 77332291 77332310 CTTCTTCCAATCTGGAGGAG 59 77351744 77351762 AGCCAGAGAAATTGAAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fmr1 ENSMUSG00000000838 ENSMUST00000114655,ENSMUST00000114654 1 2 8 80 X 65966430 65966448 TCCCGAACAGATAATCGTC 58 65966492 65968700 GTTAACTGTGATCTGCAGG 58 NA Mus musculus 50 Slc26a3 ENSMUSG00000001225 ENSMUST00000001254,ENSMUST00000110854 2 2 2 83 12 32134095 32135684 TCTGGAATCATTCAGTTGCT 59 32135730 32135748 GAAGCCACTGATTAGGGAC 59 NA Mus musculus 50 Slc26a3 ENSMUSG00000001225 ENSMUST00000001254 1 1 2 80 12 32150707 32151267 ACAGATGACACCTAAAGGG 58 32151311 32151329 TCTATCTGGTTGTTGTCCA 57 NA Mus musculus 50 Clpb ENSMUSG00000001829 ENSMUST00000106998 3 1 3 123 7 108855087 108859929 CCATTCTCTGGAAGATGGG 59 108871220 108871238 ATCCTCTCGAGTGACTAGG 59 NA Mus musculus 50 Rps11 ENSMUSG00000003429 ENSMUST00000003521,ENSMUST00000051978 1 2 2 103 7 52378598 52378797 CCTAAAGAGGCTATTGAGGG 59 52378310 52378328 TTCATCTTCGTCACGACAC 59 NA Mus musculus 50 Ikbkg ENSMUSG00000004221 ENSMUST00000114129,ENSMUST00000114133,ENSMUST00000064407 1 3 7 158 X 71679338 71682509 GAAGAAATGCCAACAGATGG 59 71684254 71684272 CTGACCTGCTCACTAACTG 59 NA Mus musculus 50 Atp6v1f ENSMUSG00000004285 ENSMUST00000004396 3 1 1 109 6 29417823 29417841 GGCAGAGGTAAGCTAATCG 59 29417913 29417932 ACTACCAGGAAATTAGGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Dtx2 ENSMUSG00000004947 ENSMUST00000111144,ENSMUST00000005072,ENSMUST00000111145,ENSMUST00000111142 3 4 5 60 5 136504395 136504414 CAGGTGATCAGAAAGTACAC 57 136504435 136504946 AGATAATGCAGTCCTCTTCAG 59 NA DesignRelaxed Mus musculus 50 Msh4 ENSMUSG00000005493 ENSMUST00000005630 3 1 2 110 3 153532723 153535243 TCTTTCTGACTACGTTCGAC 59 153532632 153532650 TAGGTATTGTTGGCGACAG 59 NA Mus musculus 50 Rad51c ENSMUSG00000007646 ENSMUST00000007790,ENSMUST00000067692 1 2 2 80 11 87208894 87211138 AGATCATCCAAAGGTGCAG 59 87208832 87208852 CGAAGGGATAGATCTTCAAGG 59 NA Mus musculus 50 Ankrd26 ENSMUSG00000007827 ENSMUST00000007971 2 1 3 121 6 118473822 118473840 TACGACTGGAAATGGACAC 59 118473650 118473738 CATTGTGTTCTTGACCATCC 59 NA Mus musculus 50 Arid1a ENSMUSG00000007880 ENSMUST00000105897,ENSMUST00000105896 3 2 3 92 4 133242399 133242417 AAATCTCATGCCTTCCACC 59 133242232 133242343 GAATCATGTTGTTGCTGCT 59 NA Mus musculus 50 Crlf1 ENSMUSG00000007888 ENSMUST00000008032 3 1 2 60 8 73023087 73023106 TTACATACCAACTACTCCCT 57 73023236 73023254 CACATGTGTTATCCTGACC 57 NA DesignNoJunction Mus musculus 50 Hdac5 ENSMUSG00000008855 ENSMUST00000107152,ENSMUST00000107151 2 2 3 68 11 102060152 102060170 ATCACAGCTAAACTCCTGC 59 102059091 102060120 GTGAATATCCCAGTCCACG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Nav1 ENSMUSG00000009418 ENSMUST00000067414 1 1 3 80 1 137361325 137364225 CAACATAGTTCATGGCTCG 58 137360496 137360514 GATTGCATCCTCTCCTCAG 59 NA Mus musculus 50 Vav2 ENSMUSG00000009621 ENSMUST00000056176 2 1 2 90 2 27141216 27141234 CAGCTATGAGCTGAAGGAG 59 27138930 27141164 ATAGGACCACTTCTTGATGTC 59 NA Mus musculus 50 Taz ENSMUSG00000009995 ENSMUST00000114182,ENSMUST00000069722,ENSMUST00000077311 2 3 4 82 X 71533368 71533386 CTACCAGAAAGGGATGGAC 59 71533431 71533528 TGTTTACTTTCCCTTCTGGG 59 NA Mus musculus 50 Ptprs ENSMUSG00000013236 ENSMUST00000067538,ENSMUST00000113012 3 2 5 101 17 56567428 56567446 CTACCAGGTCCACTATGTG 58 56565911 56567364 TTCGTTATCACCATTTCCTG 57 NA Mus musculus 50 Pkd2l2 ENSMUSG00000014503 ENSMUST00000097629 2 1 2 94 18 34576619 34576637 ACAACTGGATTAGCAGAGG 58 34576694 34577157 GAAATTGCTCCTGATGATGC 59 NA Mus musculus 50 Setdb1 ENSMUSG00000015697 ENSMUST00000015841,ENSMUST00000107171 2 2 3 80 3 95144133 95144151 CTACAGCCTATAGCTCCAC 58 95143975 95144091 GCTTTCTAAGCTTTCAGTGTC 59 NA Mus musculus 50 Nt5c3l ENSMUSG00000017176 ENSMUST00000107398,ENSMUST00000107399,ENSMUST00000092688,ENSMUST00000092689,ENSMUST00000107397 3 5 6 89 11 100292583 100294241 CAGTGAGGATGGATTCCTG 59 100292512 100292530 AAGTAGCTGGAGTTCTCAC 58 NA Mus musculus 50 Cacnb4 ENSMUSG00000017412 ENSMUST00000078324,ENSMUST00000102760,ENSMUST00000102761 3 3 3 81 2 52290262 52292416 CTGGATTACAGAGTCAGCG 59 52290199 52290217 GAGGTCATTAGGCTTCGTC 59 NA Mus musculus 50 Cadps2 ENSMUSG00000017978 ENSMUST00000115358,ENSMUST00000115362,ENSMUST00000115361 2 3 8 85 6 23279075 23279093 GTTGACCTGATGGAGTCTG 59 23273424 23279026 GTTGAGCCATTGTTGACAG 59 NA Mus musculus 50 Akap1 ENSMUSG00000018428 ENSMUST00000018572,ENSMUST00000107904,ENSMUST00000107903 2 3 4 90 11 88700361 88700946 CATAGAAGGCTCTCAGCAC 59 88700289 88700307 TGGCGCATAGATATTGGTG 59 NA Mus musculus 50 Rfx4 ENSMUSG00000020037 ENSMUST00000060397,ENSMUST00000095388 2 2 3 139 10 84358714 84358734 CTATAACTACGGGAGCTATGG 58 84358835 84367712 TATTGAAAGGGTACTGGGC 58 NA Mus musculus 50 Vps54 ENSMUSG00000020128 ENSMUST00000109578 3 1 3 84 11 21163345 21164674 AAGGAACCCACAGTTACAG 59 21164719 21164740 GTGTAGGATCATTTAATGCTGC 59 NA Mus musculus 50 Tcn2 ENSMUSG00000020432 ENSMUST00000109993,ENSMUST00000109991,ENSMUST00000020710,ENSMUST00000109990,ENSMUST00000109988,ENSMUST00000109992,ENSMUST00000109989 2 7 7 96 11 3822083 3822101 TGTCACCATACGAACAGAC 59 3819400 3822023 GTCCCATACGTGAATCCTC 59 NA Mus musculus 50 Butr1 ENSMUSG00000020490 ENSMUST00000108818 1 1 3 126 11 58733935 58733953 ACTTCTCAGTTTCAGCCAG 59 58734043 58740284 AATCCAGTGTCCTGTTCTG 59 NA Nonspecific Mus musculus 50 1200011M11Rik ENSMUSG00000020495 ENSMUST00000020801 3 1 1 62 11 86893677 86893697 GCTCCTTTGCAGATAATACTG 58 86891620 86891639 AAATACTGGACATGGTGGTG 59 NA DesignNoJunction Mus musculus 50 Cox11 ENSMUSG00000020544 ENSMUST00000020851,ENSMUST00000099960 2 2 2 239 11 90501774 90501792 TAAGGTCACCTTCAATGCT 58 90505705 90505724 TCTTCTTGTGGATTAAGCCT 58 NA DesignNoJunction Mus musculus 50 Ncoa1 ENSMUSG00000020647 ENSMUST00000072464,ENSMUST00000085814 2 2 2 80 12 4313114 4315698 GAAGATGGTGAAGATTTCCAG 58 4313054 4313072 TTCTACACCTGTAATGGCT 57 NA Mus musculus 50 Exoc7 ENSMUSG00000020792 ENSMUST00000021147,ENSMUST00000106413 1 2 6 117 11 116156998 116158897 ATTCCTCTGGAAGGGAGAG 59 116156899 116156917 GGATGATCTCCATCAGCAG 59 NA Mus musculus 50 0610010K14Rik ENSMUSG00000020831 ENSMUST00000108579 2 1 9 106 11 70048967 70049540 AGAAACAGAAGGCTGACAG 59 70048879 70048897 GAACAATGAGGGTCAGAGG 59 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 Usp43 ENSMUSG00000020905 ENSMUST00000021288,ENSMUST00000108676 3 2 3 120 11 67690025 67693307 CATTACACAGCCTATTGCC 58 67689923 67689943 GGTAGAATAGGATGTAAGCCC 59 NA Mus musculus 50 Ppp1r13b ENSMUSG00000021285 ENSMUST00000084938 3 1 2 117 12 113076901 113076920 CCTTATATCCAGGTTCCCAG 58 113075309 113076821 TGTAGCCATCAGATTTGGA 58 NA Mus musculus 50 Fancc ENSMUSG00000021461 ENSMUST00000021916,ENSMUST00000073029,ENSMUST00000099444 3 3 3 87 13 63431921 63433160 TGAAATGTTCAGGTTTGTGC 59 63431853 63431871 TTCTACCAAGCACGATGTG 59 NA Mus musculus 50 Slc35f4 ENSMUSG00000021852 ENSMUST00000074368,ENSMUST00000022400 3 2 2 81 14 49920619 49920637 GAGTGGTACTGACATACCC 58 49918620 49920575 TTAAGGAGATCTACAGCTGC 58 NA Mus musculus 50 Rcbtb2 ENSMUSG00000022106 ENSMUST00000022702,ENSMUST00000110952 2 2 2 80 14 73578304 73578322 CAAGCAAGGAATCTGTGAG 58 73578366 73582279 AACTCTTCTAAGTCCTGGG 57 NA Mus musculus 50 Scel ENSMUSG00000022123 ENSMUST00000110760 3 1 3 198 14 103959540 103964012 GACTAATAGGACTGAGGATCTC 58 103971231 103971249 GATCAGGCTTTCAAGACTC 57 NA Mus musculus 50 Efcab6 ENSMUSG00000022441 ENSMUST00000109466,ENSMUST00000016589 1 2 4 80 15 83863567 83874619 GACCCTCTTCATCAACCAC 59 83863505 83863526 AAATCTTCTGAGCTAGAATCCG 59 NA Mus musculus 50 1500032L24Rik ENSMUSG00000022452 ENSMUST00000023086 2 1 1 129 15 82178371 82178390 CTTTCTCTATGTCGGGACAC 59 82179284 82179302 ATCAGTGCTTTCTCCTGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Mgrn1 ENSMUSG00000022517 ENSMUST00000023159 3 1 3 122 16 4926367 4927685 GGGAAACAAGTTCTGACAG 58 4927770 4927789 AGGTGATTTCCTCATAGAGG 58 NA Mus musculus 50 Bfar ENSMUSG00000022684 ENSMUST00000023365 3 1 2 80 16 13689005 13692531 AGAGTAAATGGAAGGTTGCT 58 13692573 13692592 GTGGCTACTGTTCTCTATGG 59 NA Mus musculus 50 Nat13 ENSMUSG00000022698 ENSMUST00000063520,ENSMUST00000063542,ENSMUST00000023382,ENSMUST00000114661 2 4 5 81 16 44158046 44159583 GACAATATCTATCTGCATGTCC 58 44159624 44159643 TCTCGATAATCTCAAAGCCA 58 NA Mus musculus 50 Serping1 ENSMUSG00000023224 ENSMUST00000111642,ENSMUST00000023994 1 2 3 92 2 84607495 84607513 AAATTCCTGCCCACTTACC 59 84605974 84607442 GTCAAAGAATTCCAGTTTCTCC 59 NA Mus musculus 50 Tbc1d5 ENSMUSG00000023923 ENSMUST00000024717 1 1 3 80 17 50935313 50939206 TACAGTTGAACAAAGGCGA 59 50935251 50935269 CTTGGAGGTCAGTTAGAGC 59 NA Mus musculus 50 Nfya ENSMUSG00000023994 ENSMUST00000046719,ENSMUST00000078800 1 2 2 82 17 48531365 48531673 ATGGTCATGATGGTACCAG 58 48531301 48531319 TCTTCTTCCAGCATCTCTG 58 NA Mus musculus 50 1300018I05Rik ENSMUSG00000024019 ENSMUST00000087910 1 1 3 80 17 29772900 29772921 TAAGATGGTGGATAACCTAAGC 59 29772962 29811096 CTTGTAGCAGATGCTCTCC 59 NA Mus musculus 50 Sfrs7 ENSMUSG00000024097 ENSMUST00000063403 1 1 3 192 17 80605350 80605908 GGAAACCAAGGTATATGTTGG 58 80604769 80605197 ACAAATCACTTTCCCATCCA 59 NA Mus musculus 50 Esco1 ENSMUSG00000024293 ENSMUST00000025142,ENSMUST00000115863 3 2 5 88 18 10588539 10593752 CCAGATCAGAATTTCAGCA 57 10588469 10588487 TGACTGAGAAGAGTTGAGG 58 NA Mus musculus 50 Dtna ENSMUSG00000024302 ENSMUST00000115834,ENSMUST00000115833,ENSMUST00000115832,ENSMUST00000025156,ENSMUST00000075123,ENSMUST00000047954 2 6 7 88 18 23704257 23728070 GAAATGCAATTTGCACCTG 58 23728122 23728140 GTTCTATGTTTGGGTCCAG 57 NA Mus musculus 50 2610110G12Rik ENSMUSG00000024426 ENSMUST00000061052,ENSMUST00000077494,ENSMUST00000025296,ENSMUST00000056034 3 4 5 180 17 36041245 36041263 CTTTGAAGGCTTCTTTGCC 59 36038546 36038937 TACCTTCAGGAATTCTCTGTC 58 NA Mus musculus 50 Diap1 ENSMUSG00000024456 ENSMUST00000115634,ENSMUST00000115631,ENSMUST00000025337,ENSMUST00000115630,ENSMUST00000080033 1 5 5 80 18 38060345 38060366 CCCAATATGATGATTGATGCAG 59 38057244 38060305 AACTCGTTCATTCATGTCCT 59 NA Nonspecific Mus musculus 50 Lgals12 ENSMUSG00000024972 ENSMUST00000051105 1 1 3 102 19 7672524 7672544 AATGTCCACCTACTGTGTC 58 7672438 7672456 AGAATGGGCTGTAACTGTG 59 NA Mus musculus 50 Eif4a3 ENSMUSG00000025580 ENSMUST00000026667,ENSMUST00000106254,ENSMUST00000106253 3 3 3 183 11 119157402 119157420 CACCTTCAGTGTCTCAGTG 59 119155709 119155892 GCGGATCATATCAAAGACG 58 NA DesignRelaxed Mus musculus 50 Pigq ENSMUSG00000025728 ENSMUST00000097368 3 1 2 113 17 26071787 26071806 TTTCTGTGCTACTGGATGTG 59 26071209 26071711 TGCTTTGACTATCAGCCAC 59 NA Mus musculus 50 Plekhb2 ENSMUSG00000026123 ENSMUST00000027297,ENSMUST00000115060 2 2 2 80 1 34926184 34926203 GGAACTCAAGTTGTCTATGC 58 34926246 34933769 TTGTCCATAAACTCCTGCA 58 NA Mus musculus 50 Plekhb2 ENSMUSG00000026123 ENSMUST00000027297,ENSMUST00000115060 3 2 2 81 1 34926186 34926204 AACTCAAGTTGTCTATGCC 57 34926248 34933772 CTGTTGTCCATAAACTCCTG 58 NA Mus musculus 50 Plcd4 ENSMUSG00000026173 ENSMUST00000067916,ENSMUST00000113749,ENSMUST00000113750,ENSMUST00000113747,ENSMUST00000113745,ENSMUST00000113748,ENSMUST00000027362 2 7 7 87 1 74602586 74602604 TTATCATGGGCATACCCTG 58 74602654 74604305 GTAGTCTGATGACTGGAAGG 59 NA Mus musculus 50 Iqca ENSMUSG00000026301 ENSMUST00000113094,ENSMUST00000080298 2 2 3 81 1 92041443 92041463 TGGTAGAGTTGGAAATGACAG 59 92039354 92041400 ACATCCAACTGTTGAGGAG 59 NA Mus musculus 50 Fcamr ENSMUSG00000026415 ENSMUST00000112477,ENSMUST00000027670 3 2 2 81 1 132701253 132707958 CCTTTCAGGTACAAATGCA 57 132708003 132708021 GTAATGGCAATGGATGGTG 58 NA Mus musculus 50 Prrx1 ENSMUSG00000026586 ENSMUST00000027878,ENSMUST00000075805 2 2 2 64 1 165187918 165187936 CAGACCAACCGATTATCTC 57 165178508 165178526 CAGAATAAGTAGCCATGGC 57 NA DesignNoJunction Mus musculus 50 Odf2 ENSMUSG00000026790 ENSMUST00000113759 3 1 13 83 2 29759617 29768094 ACTGCAAAGAGAAGGATTCC 59 29768140 29768158 CTTTCTCTGAGTCTGCCTC 59 NA Mus musculus 50 Tsc1 ENSMUSG00000026812 ENSMUST00000028155,ENSMUST00000113869,ENSMUST00000113870,ENSMUST00000113868 3 4 5 80 2 28531217 28531236 GAGGAATCTACCTGATTTCC 57 28531279 28531529 GATATTGCAGCTTCTTCCT 57 NA Mus musculus 50 Gapvd1 ENSMUSG00000026867 ENSMUST00000113103,ENSMUST00000113101 1 2 7 92 2 34551121 34556293 TATGCCTAAAGATGAGCCC 58 34551047 34551065 GTCCGTTTAATGGCATTCC 59 NA Mus musculus 50 Dab2ip ENSMUSG00000026883 ENSMUST00000112997,ENSMUST00000112987,ENSMUST00000091010,ENSMUST00000112992,ENSMUST00000112980,ENSMUST00000095461,ENSMUST00000112989 3 7 13 122 2 35517137 35563177 CAATGAGAGGTCCCATCTG 59 35563262 35563281 GGCTTGATAATCACCTCCTC 59 NA Mus musculus 50 Brd3 ENSMUSG00000026918 ENSMUST00000113941,ENSMUST00000077737,ENSMUST00000028282 2 3 3 80 2 27319460 27319479 AGACACTCTGGAAACATCAG 59 27319103 27319420 TATGATAATCAGGCAGGTTCAG 59 NA Mus musculus 50 Lrp2 ENSMUSG00000027070 ENSMUST00000080953,ENSMUST00000100051 2 2 3 80 2 69351427 69352204 ATCGATTGGAGTACTTCCC 58 69351365 69351384 GTCTAAACCATCAAGGTTGC 59 NA Mus musculus 50 Mfap1b ENSMUSG00000027238 ENSMUST00000110593,ENSMUST00000077436,ENSMUST00000110592,ENSMUST00000110591,ENSMUST00000110590 3 5 5 97 2 121399400 121402072 CCTATATCCTTCAAGCGGAG 59 121399322 121399341 TTTCTCTGAATGTTTCGGGA 59 NA Mus musculus 50 Pacsin3 ENSMUSG00000027257 ENSMUST00000059566,ENSMUST00000028694,ENSMUST00000111349 3 3 3 85 2 91103326 91103451 CACAGTTTGAGGAATGGTC 58 91103500 91103518 CAGAGTAACCTCATCTGGG 58 NA Mus musculus 50 Necab3 ENSMUSG00000027489 ENSMUST00000000895,ENSMUST00000109716 3 2 3 94 2 154381379 154381398 AGAATTACTTTGCTGATGGG 57 154380646 154381325 CTCTGTCTCTAAATTGTCAGTG 58 NA Mus musculus 50 Ctnnbl1 ENSMUSG00000027649 ENSMUST00000029178,ENSMUST00000103125 3 2 2 125 2 157614758 157614776 CATCATTCAGGAGATGCAC 58 157614865 157625178 ACAGCTATGGACACATCTG 59 NA Mus musculus 50 Gdap2 ENSMUSG00000027865 ENSMUST00000029459,ENSMUST00000106997 3 2 2 81 3 99995611 99998416 GATAGATATGGACAAGGCCC 59 99998458 99998478 GAAATACACCAGCACATACTC 58 NA Mus musculus 50 Adar ENSMUSG00000027951 ENSMUST00000098924,ENSMUST00000107405,ENSMUST00000029563,ENSMUST00000107404 3 4 4 81 3 89540131 89540150 CAGTTCACTAGTCAGACCTG 59 89540191 89541928 CAACCTGGAATTTAAATCGAGG 59 NA Mus musculus 50 Trim2 ENSMUSG00000027993 ENSMUST00000107692,ENSMUST00000107691,ENSMUST00000107695,ENSMUST00000107693,ENSMUST00000107694,ENSMUST00000065380,ENSMUST00000054990 3 7 7 103 3 83994504 83994522 CAGAAGGCTGTGAAGAGAC 59 83982085 83994438 TTTCTTCCTTTGGTACCGAC 59 NA Mus musculus 50 Spata1 ENSMUSG00000028188 ENSMUST00000029839 2 1 2 81 3 146132764 146138235 TCGAAACGATATCATGCCTC 59 146132702 146132721 AAACTTCCTCCAATGATGCT 59 NA Mus musculus 50 Cpne3 ENSMUSG00000028228 ENSMUST00000029885,ENSMUST00000108254 3 2 2 81 4 19479441 19479462 GTTTCCAGTAAGAAGCTAACTC 58 19477797 19479401 CTGCTGAAATCGTAATACTCC 58 NA Mus musculus 50 Cga ENSMUSG00000028298 ENSMUST00000108130,ENSMUST00000029975 3 2 2 82 4 34851345 34852335 TATTATTCAGGGTTGCCCAG 59 34852380 34852398 CCATACACTGGTAGATGGG 58 NA Mus musculus 50 Rnf20 ENSMUSG00000028309 ENSMUST00000029989 1 1 2 80 4 49654990 49655008 AGAGAATGTGAGGCTTCAG 58 49655052 49657369 TGCAACTTACAGAACTCCT 58 NA Mus musculus 50 1110017D15Rik ENSMUSG00000028441 ENSMUST00000095126,ENSMUST00000030152 2 2 2 82 4 41458517 41458538 GGACTACACCTATAAGAGTTCC 59 41455654 41458476 ATTTGTCCTCTTCATCTGGAG 59 NA Mus musculus 50 Pum1 ENSMUSG00000028580 ENSMUST00000030315,ENSMUST00000097863,ENSMUST00000097864,ENSMUST00000097862 1 4 6 81 4 130274105 130274123 GAATCCAGCAAAGATGGAC 58 130274167 130275096 CTGAATGATCTGATGTTCCC 58 NA Mus musculus 50 Trim63 ENSMUSG00000028834 ENSMUST00000105875 2 1 2 133 4 133881577 133881596 CTTAGAACACATAGCAGAGG 57 133883687 133884828 ATTGGTGTTCTTCTTTACCC 57 NA Mus musculus 50 Sfrs4 ENSMUSG00000028911 ENSMUST00000053819 3 1 2 169 4 131429773 131447127 ATCTGAAGAACGGGTATGG 58 131447260 131448009 ATAACCATATCCACTGCGT 58 NA Mus musculus 50 Fastk ENSMUSG00000028959 ENSMUST00000030800,ENSMUST00000115041 1 2 2 281 5 23947471 23947558 ACTGCACAGACTTTCTACTC 59 23947058 23947076 ACTCCAGCTCTTCAAATGG 59 NA DesignRelaxed Mus musculus 50 Abcb8 ENSMUSG00000028973 ENSMUST00000115077,ENSMUST00000073076,ENSMUST00000035362 3 3 3 98 5 23912600 23912619 TCATAGGTTTCATCAGCCAG 59 23913186 23913204 TGTACACCTCTTCATCGGA 59 NA DesignNoJunction Mus musculus 50 Fbxo44 ENSMUSG00000029001 ENSMUST00000057907,ENSMUST00000105704 2 2 3 96 4 147530754 147530773 AATGGAAGGTAGAGGATCTC 57 147530588 147530695 TTGAGGCAGGTGTAATAGG 58 NA Mus musculus 50 Gnb1 ENSMUSG00000029064 ENSMUST00000030940,ENSMUST00000105616 3 2 2 85 4 154917231 154917249 TCTGCTCCATTTACAACCT 58 154917298 154925777 ACAGGACAGATAACCTGTG 58 NA Mus musculus 50 Gpr125 ENSMUSG00000029090 ENSMUST00000030971,ENSMUST00000087390 3 2 2 81 5 50404679 50404697 GACGAACAACCGAATAGGT 59 50402786 50404635 ATTCCCTGAAAGGTTTAGCC 59 NA Mus musculus 50 Rufy3 ENSMUSG00000029291 ENSMUST00000087029 2 1 4 105 5 89013301 89013319 ATGACATCTCCCTTACACC 58 89027505 89043975 TAATTGGGATCTTCTGGGTC 58 NA Mus musculus 50 A230097K15Rik ENSMUSG00000029314 ENSMUST00000112887,ENSMUST00000031255,ENSMUST00000092990 2 3 3 80 5 101286163 101286181 GGCCACATTACGAATTCAG 58 101286222 101312224 TCTCTTTGGATAATACCCACAG 59 NA Mus musculus 50 Rbm19 ENSMUSG00000029594 ENSMUST00000031590,ENSMUST00000111903 2 2 2 83 5 120574712 120574732 ATTGAATTCCTAGCTCCTCTG 59 120574777 120576196 CACGAAGACATACCCTGTC 59 NA Mus musculus 50 Gcc1 ENSMUSG00000029708 ENSMUST00000090511,ENSMUST00000064377 1 2 2 60 6 28369040 28369059 CCAGTCTGGATATCAATGTC 57 28368999 28369018 ACCTGTAGTAGCTTCTTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rab43 ENSMUSG00000030055 ENSMUST00000032134 3 1 3 198 6 87744775 87759615 CTGTTACAGATTTGGGACAC 58 87742823 87744614 CTGACTTGTTCCCAATCAG 58 NA Mus musculus 50 Erc1 ENSMUSG00000030172 ENSMUST00000032279,ENSMUST00000071356,ENSMUST00000079582,ENSMUST00000112732 1 4 4 68 6 119729520 119729538 AAATGGAGGTGTACAGGAG 58 119723895 119723913 ACAGTTCCTGTTTCACCTG 59 NA DesignNoJunction Mus musculus 50 Abcc9 ENSMUSG00000030249 ENSMUST00000087527,ENSMUST00000111771,ENSMUST00000073173 2 3 4 97 6 142542659 142543243 GTCGTAACCATAGCTCACC 59 142542580 142542599 TTTGGACCAGTATCACACTC 59 NA Mus musculus 50 Cib1 ENSMUSG00000030538 ENSMUST00000065163,ENSMUST00000071457 2 2 2 80 7 87372962 87373061 AGCTGATTGACAATATCCTGG 59 87372902 87372920 AGATGACATGCTGGAACTC 59 NA Mus musculus 50 Mef2a ENSMUSG00000030557 ENSMUST00000032776,ENSMUST00000076325 3 2 4 90 7 74413085 74440273 GGATATCGTTGAGGCTCTG 59 74413013 74413033 TTCTGTATGTGGAGTTAGCAC 59 NA Mus musculus 50 Sytl2 ENSMUSG00000030616 ENSMUST00000032846,ENSMUST00000107211,ENSMUST00000107210 2 3 4 82 7 97524632 97524650 CATCAATGGGCAACAAGAG 59 97524696 97528023 GAGTCAGTTCATCGGAAGG 59 NA Mus musculus 50 Il4ra ENSMUSG00000030748 ENSMUST00000106428 1 1 2 116 7 132714997 132715015 TCAACATCCTGATGTCAGG 58 132715094 132715456 CATTACTTGGGTTGTACCAC 58 NA Mus musculus 50 Tial1 ENSMUSG00000030846 ENSMUST00000106226 1 1 2 87 7 135592278 135598461 ATGATAACAGAGCAACCCG 59 135592209 135592227 AGCAATATGGGTCATTGCT 59 NA Mus musculus 50 Igsf1 ENSMUSG00000031111 ENSMUST00000114893,ENSMUST00000033442 1 2 5 80 X 47138200 47138220 GTGTCTACTATGAGACAACCA 58 47137962 47138158 GGAATGTATCAGTCACCCA 58 NA Mus musculus 50 Mcf2l ENSMUSG00000031442 ENSMUST00000095456 3 1 12 150 8 12880012 12880030 AAGGAACACGTTAGAAGCA 59 12880144 12963175 GCATGATTTCATCTGAGGC 58 NA Mus musculus 50 Dbndd1 ENSMUSG00000031970 ENSMUST00000074879,ENSMUST00000066198 2 2 2 163 8 126039226 126039244 GACTCAGTAGTCACCAGAG 58 126033843 126033861 TGAGCTGAAACATTCAGGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ilf3 ENSMUSG00000032178 ENSMUST00000067646 1 1 3 80 9 21207936 21208513 AGCAAATTCAACTACAGTGG 58 21208556 21208574 TGTGTTGTAGGACGATGAC 59 NA Mus musculus 50 Nptn ENSMUSG00000032336 ENSMUST00000034887,ENSMUST00000074429 2 2 3 60 9 58471652 58475651 ATGGAGTACAGGATCAATAAGC 59 58475670 58475690 GATATACACAGTGGTATTCGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Slco2a1 ENSMUSG00000032548 ENSMUST00000035148 1 1 2 89 9 102976821 102976840 CTCCATAATCCTATGTGCCC 59 102976892 102979268 ATAGAACTTGGTGTGCTGG 59 NA Mus musculus 50 Sfrs12 ENSMUSG00000032621 ENSMUST00000109322,ENSMUST00000074616 3 2 2 81 13 104548310 104548328 CTCAAAGTCCAGGTCTAGC 59 104543206 104548268 CCTATTATGGGATCTACTCCTG 58 NA Mus musculus 50 Ank2 ENSMUSG00000032826 ENSMUST00000043741,ENSMUST00000044443 3 2 5 80 3 126658838 126658859 GATGACAAAGTAGATAAGACCC 57 126658019 126658797 TTCCAATACCTCCACATCC 58 NA Mus musculus 50 Phldb2 ENSMUSG00000033149 ENSMUST00000077934 2 1 3 156 16 45780405 45780424 GGGAACAAGATCACTTTGTG 59 45772378 45777836 CTTCTAAAGTGCTCTTTCAGAG 58 NA Mus musculus 50 BC059842 ENSMUSG00000033253 ENSMUST00000075406 3 1 3 80 4 118070765 118070783 GCTGGTCAGTATGATTCGT 59 118070309 118070722 GTGATCACAATGATACCTGC 58 NA Mus musculus 50 Map2k4 ENSMUSG00000033352 ENSMUST00000046963,ENSMUST00000108694 2 2 2 60 11 65509822 65509841 AAGACAAGGGTATGATGTCC 59 65507064 65509800 CAACTCGTACAATGTGATCC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Prickle4 ENSMUSG00000033475 ENSMUST00000113301 1 1 2 62 17 47824158 47824176 GACATTGATTTGATGGCCC 59 47823989 47824007 AAACACAGGAGAACTGCTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Phka1 ENSMUSG00000034055 ENSMUST00000052012,ENSMUST00000113611 1 2 3 87 X 99752605 99754915 CAACAAGTAATGCTCGCTG 59 99752536 99752554 GGAGCTAGTTTAGGATGGG 58 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111696,ENSMUST00000111695,ENSMUST00000111694,ENSMUST00000111678,ENSMUST00000111677,ENSMUST00000111676,ENSMUST00000111687,ENSMUST00000111685,ENSMUST00000111684,ENSMUST00000111672 2 10 23 71 2 84443385 84443403 AAGAGTTGGATGTGTTGGT 59 84443048 84443350 GCTAAATCTTCTGCATGGG 58 NA DesignRelaxed Mus musculus 50 Ssh3 ENSMUSG00000034616 ENSMUST00000113852 2 1 2 116 19 4265893 4265914 TACTTACTACCAGGAGAAACTC 58 4265704 4265816 CTGGTAGTGATCTGTCCAG 58 NA Mus musculus 50 Setmar ENSMUSG00000034639 ENSMUST00000049246 3 1 1 60 6 108026026 108026044 GGGAAGATTTGTCTGTGAG 57 108026068 108026086 TCTTCTTTGCACTTCAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem106a ENSMUSG00000034947 ENSMUST00000100403,ENSMUST00000039581 1 2 3 126 11 101450197 101450215 TATCCCATCACAGTGACAC 58 101450305 101450427 CAACTTCGTAAGGCATCTG 58 NA Mus musculus 50 Mitf ENSMUSG00000035158 ENSMUST00000043637,ENSMUST00000113342,ENSMUST00000101123,ENSMUST00000113339,ENSMUST00000043628 1 5 7 111 6 97946456 97953891 CAAATACGTTACCCGTCTC 57 97953966 97953984 TTTATGTTGGGAAGGTTGG 57 NA Mus musculus 50 2410004L22Rik ENSMUSG00000035439 ENSMUST00000110071,ENSMUST00000035960 3 2 2 103 8 73778495 73778513 GAATACATGACACTGGGCA 59 73777144 73778428 TCCAGATCATCTAGGAGCT 58 NA Mus musculus 50 6330514A18Rik ENSMUSG00000035486 ENSMUST00000105351,ENSMUST00000039836 3 2 2 164 10 79823077 79823096 GCAAGATGACTTCTTCAGTC 58 79823308 79823446 TTTGAGGTAAAGGGACAAGG 59 NA Mus musculus 50 Tsga8 ENSMUSG00000035522 ENSMUST00000049420 3 1 1 78 X 80732975 80732993 GATTCTCAGGAGGTGAAGC 59 80732915 80732933 CACAAAGAATGTGAGGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Caps2 ENSMUSG00000035694 ENSMUST00000092176 3 1 2 150 10 111620108 111620128 GATGATGGACCACTTATCCAG 59 111628116 111631993 GGTTCTTATCTTCGTTTCATGC 59 NA Mus musculus 50 Dnajc12 ENSMUSG00000036764 ENSMUST00000043317 2 1 1 71 10 62858591 62858609 ATCCTGAGAACTCCAAAGC 59 62860019 62860037 CTGCATTGCACAGAATCTC 59 NA DesignNoJunction Mus musculus 50 Trim17 ENSMUSG00000036964 ENSMUST00000075141 3 1 2 103 11 58783942 58784052 CCTTGAACAGGAAGGAGAG 59 58784118 58784137 TTTGAGCACCTCTATCTGTC 59 NA Mus musculus 50 Xpnpep2 ENSMUSG00000037005 ENSMUST00000115000,ENSMUST00000077775,ENSMUST00000114998 3 3 3 81 X 45483228 45483248 CCTATACTCGAGTGCTAATGG 59 45483291 45483871 GCTTCTATCACTCTCCCTG 58 NA Mus musculus 50 A230067G21Rik ENSMUSG00000037110 ENSMUST00000109986,ENSMUST00000048623,ENSMUST00000109982 3 3 3 80 2 146254387 146254405 AGAAGCCAAAGGATAAGCA 58 146250575 146254343 AAGCCACAATAAGTGTCCT 58 NA Mus musculus 50 4932438A13Rik ENSMUSG00000037270 ENSMUST00000039493 1 1 3 80 3 36921940 36925016 GAAGGGTACTTTCAGTTTCC 58 36925058 36925077 TGATGAATAATGCGATGGAC 58 NA Mus musculus 50 Hand1 ENSMUSG00000037335 ENSMUST00000108845 1 1 2 269 11 57646271 57646289 CTAGAGGAGCAGAGATCAG 57 57645249 57645267 GATGATGGTGATGATGTGC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Pank2 ENSMUSG00000037514 ENSMUST00000041233,ENSMUST00000103185,ENSMUST00000079386 3 3 4 86 2 131099927 131099946 CTTCTCAAGTCTCCACACTG 59 131099994 131105906 TGAAGGTCACCTATTGTGAG 59 NA Mus musculus 50 Atp8a1 ENSMUSG00000037685 ENSMUST00000037380,ENSMUST00000072971,ENSMUST00000113656 2 3 5 80 5 68039034 68039776 CTATTGGACATGGTTCAGC 58 68038972 68038990 AGAGATGAGTAGATCCCGA 58 NA Mus musculus 50 Slc32a1 ENSMUSG00000037771 ENSMUST00000045738,ENSMUST00000109483,ENSMUST00000099132 1 3 3 60 2 158440002 158440020 GGTCATCGCTTACTGTCTC 59 158440043 158440062 GTAGAACTTCACCTTCTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Atp13a4 ENSMUSG00000038094 ENSMUST00000039090 2 1 2 167 16 29422687 29422705 GAAGAGAAGAAACCTGGTC 57 29421025 29421753 GTTCATAACTAGCTTTGGCA 58 NA Mus musculus 50 Tmem16b ENSMUSG00000038115 ENSMUST00000067267,ENSMUST00000041000,ENSMUST00000100935 1 3 3 93 6 125986960 125989268 ATCATCTTCCAGAACCTAGTG 58 125989323 125989341 CTTTCTTGATCTGGTCGCT 59 NA Mus musculus 50 Gngt2 ENSMUSG00000038811 ENSMUST00000107712,ENSMUST00000107714,ENSMUST00000107711,ENSMUST00000100532,ENSMUST00000036088,ENSMUST00000107709,ENSMUST00000107708 3 7 7 96 11 95706447 95706809 GTGATCTGATTTCCAAGACAG 58 95706867 95706885 TTCTTGTCTTCTGGGATGC 59 NA Mus musculus 50 Sptlc3 ENSMUSG00000039092 ENSMUST00000110083,ENSMUST00000047370 1 2 2 80 2 139421791 139451545 GGAACATTGGAGGTATGGA 58 139451589 139451607 ATCCCATCTCTTTCAGTCG 58 NA Mus musculus 50 Cdc123 ENSMUSG00000039128 ENSMUST00000100445 2 1 3 83 2 5742326 5742344 ATCACCCATGACTTCACAC 59 5731053 5731850 AACTAGATTTGGCTCGTACTC 59 NA Mus musculus 50 Akap7 ENSMUSG00000039166 ENSMUST00000095779 2 1 3 119 10 25003713 25003731 TATTTCCTGTCCATTCCGA 57 24999524 24999543 TGTATCCTGGTTCAATCCTC 58 NA DesignNoJunction Mus musculus 50 Wdr45 ENSMUSG00000039382 ENSMUST00000043045,ENSMUST00000116634,ENSMUST00000115689,ENSMUST00000115690,ENSMUST00000115687 1 5 8 80 X 7304141 7304160 TCTCTTTGATACCCAATCCA 58 7304202 7304304 AAGTTAATGCAGTACAGGGT 58 NA Mus musculus 50 Mtmr7 ENSMUSG00000039431 ENSMUST00000048898 2 1 2 93 8 41643576 41643594 TTCTGACTCACATTCAGCA 58 41641878 41643520 CCATTCTCATTGAGTTCTCG 58 NA Mus musculus 50 AA536717 ENSMUSG00000039599 ENSMUST00000090499,ENSMUST00000037698 2 2 5 101 14 21179128 21182492 CACACGGATATGGAAGAGG 59 21182557 21182575 TTTCATGCAGTGAAATGGC 59 NA Mus musculus 50 Dnajc11 ENSMUSG00000039768 ENSMUST00000103200,ENSMUST00000062904,ENSMUST00000105666 2 3 3 160 4 151342712 151342730 AATGCACATATCCCAGTCC 59 151344072 151344978 CTCCAAACTCCAACTCTCC 59 NA Mus musculus 50 Zfp800 ENSMUSG00000039841 ENSMUST00000115320,ENSMUST00000115321,ENSMUST00000035930 3 3 3 80 6 28206515 28210725 CGAACCAGTTTATATCCTGG 57 28206454 28206472 TGCTGAATACCAGATTTGG 57 NA Mus musculus 50 Adam22 ENSMUSG00000040537 ENSMUST00000115388 3 1 13 82 5 8111945 8111964 TAATAGGAATAATTGCCGGC 57 8092819 8111903 GAGTCCATTTGACTTATAACCC 58 NA Mus musculus 50 Ckap5 ENSMUSG00000040549 ENSMUST00000046769 2 1 4 101 2 91456604 91459914 TCCTACTTCAACAGGTAACAC 59 91459977 91459995 TTTGTGTTGTCAAGACCAC 58 NA Mus musculus 50 Ulk4 ENSMUSG00000040936 ENSMUST00000098284,ENSMUST00000051479,ENSMUST00000098283 1 3 4 90 9 121175728 121182005 GAAATAACCAACTGGGTCC 57 121175656 121175674 AGAGATGATTGCTGGTCTC 58 NA Mus musculus 50 Sytl3 ENSMUSG00000041831 ENSMUST00000097430,ENSMUST00000075075,ENSMUST00000115762,ENSMUST00000115761,ENSMUST00000115760,ENSMUST00000080509 1 6 7 80 17 6919847 6919866 GAGATATGCATCAAGACCTG 57 6919909 6932603 GTAGGTCTTGACATACGGA 58 NA Mus musculus 50 Ugcgl2 ENSMUSG00000042104 ENSMUST00000046196 2 1 3 119 14 119406455 119406473 ATCAACAGACTGACAAGCA 59 119402196 119406372 CATGTCTCACGATCTGGTC 59 NA Mus musculus 50 Sestd1 ENSMUSG00000042272 ENSMUST00000102660,ENSMUST00000044107,ENSMUST00000102659 3 3 3 81 2 77030629 77034890 AGGAAACAAAGATGTGAGGA 58 77030567 77030588 CCTCTTCACACTTAAACAACTG 59 NA Mus musculus 50 4933432B09Rik ENSMUSG00000042564 ENSMUST00000109648 2 1 3 81 15 79470487 79470505 CGAATAGCCCGAAATTACG 58 79467558 79470442 ACGAGAGCCTCTTTAAGAG 58 NA Mus musculus 50 Gjc2 ENSMUSG00000043448 ENSMUST00000075445,ENSMUST00000108793,ENSMUST00000069642,ENSMUST00000108790,ENSMUST00000108792 3 5 5 61 11 58990993 58991012 GATGAGCAATCCAAGTTCAC 59 58990951 58990969 TCATAGCAGACGTTGTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC054059 ENSMUSG00000044405 ENSMUST00000109484,ENSMUST00000059889 3 2 2 122 2 158331545 158331564 TCAGATTTGTGCTTCAACTG 58 158331649 158333700 CAGATGGTACCTGGTAGAG 58 NA Mus musculus 50 Dnd1 ENSMUSG00000044595 ENSMUST00000061522,ENSMUST00000089458 3 2 2 135 18 36924133 36924759 CTGGTAGAAGGTCAGTCAC 59 36924016 36924034 TTAGTTGGCTGACATCTGG 59 NA Nonspecific Mus musculus 50 2900010J23Rik ENSMUSG00000044627 ENSMUST00000113400,ENSMUST00000113395,ENSMUST00000050410 3 3 4 188 2 32136316 32137217 GTTAATAGCAGAGGGCTACC 59 32134570 32134588 AATCTCCAAGAAGCTGCTC 59 NA InUTR Mus musculus 50 BC030307 ENSMUSG00000044937 ENSMUST00000075632,ENSMUST00000061458 3 2 2 111 10 86182400 86186953 CCATTCTCAGAATCAATTCCC 58 86187024 86187044 CTTTGGAAATTACTGACCCAG 58 NA Mus musculus 50 Sbsn ENSMUSG00000046056 ENSMUST00000080518 3 1 1 93 7 31539829 31539847 GGTCTCATCAAGGTCAAGG 59 31540025 31540043 ATAAATGGCTTGTTGACCG 58 NA DesignNoJunction Mus musculus 50 5830418K08Rik ENSMUSG00000046111 ENSMUST00000059410 3 1 4 81 9 15140060 15140080 TTCTGATGAAGACTCTCACAG 59 15139734 15140017 AGTCTCCTTGTGTAACCTG 58 NA Mus musculus 50 Ccdc66 ENSMUSG00000046753 ENSMUST00000050480,ENSMUST00000112290 3 2 2 80 14 28311960 28311978 GAGTGAACATGAGCATGTC 58 28311719 28311916 CATTCATTCTCTGTGGCAG 58 NA Mus musculus 50 Tnrc15 ENSMUSG00000048000 ENSMUST00000027475,ENSMUST00000097662 1 2 2 80 1 89337432 89337450 TGATGCAGTGAAAGAGGTG 59 89337491 89338600 ACACCTACAGATTTACTGAGAC 59 NA Mus musculus 50 Olfr1496 ENSMUSG00000048356 ENSMUST00000057390 1 1 1 60 19 13855990 13856008 ATAAGGACATGAAAGGTGC 57 13856032 13856050 ATCAAAGGGAGCAAATGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 A730037C10Rik ENSMUSG00000048655 ENSMUST00000052904,ENSMUST00000061099 3 2 2 86 3 54954670 54954688 AGCTGAATGACCAATTGGA 59 54954736 54954838 AAGACAGTCTATCTGAAGGGT 59 NA Mus musculus 50 Rapgef4 ENSMUSG00000049044 ENSMUST00000102698 2 1 3 92 2 71975310 71975328 GTATATGGCCGGACTTCTG 59 71979222 72012869 TCTGAAGGGACATTCTCCT 59 NA Mus musculus 50 Ppm2c ENSMUSG00000049225 ENSMUST00000108297,ENSMUST00000108299,ENSMUST00000108302,ENSMUST00000095144,ENSMUST00000108301,ENSMUST00000056050 1 6 6 60 4 11888123 11888142 CCAGAGGTAACTTATCACAG 57 11888082 11888101 CATCAGTTGCTAACACTAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem67 ENSMUSG00000049488 ENSMUST00000108293,ENSMUST00000050686,ENSMUST00000108291 2 3 4 85 4 11989002 11990195 CAGATTTCACTGAGCATACG 58 11988936 11988954 ATGTCACTGTAGGCAATGG 59 NA Mus musculus 50 C77080 ENSMUSG00000050390 ENSMUST00000052602,ENSMUST00000097873,ENSMUST00000106051 3 3 3 130 4 128899160 128899178 CTCTTACTGCTCCATCCAC 59 128898711 128899066 CTTCTGTGGATCTGAACCA 58 NA Mus musculus 50 Btla ENSMUSG00000052013 ENSMUST00000063654,ENSMUST00000102802 3 2 3 92 16 45239397 45239416 GTGATAATGGGTCGTATAGC 57 45239471 45242830 TTTGAGTCCTTTCTGTCAC 57 NA Mus musculus 50 Rps10 ENSMUSG00000052146 ENSMUST00000114881 2 1 3 204 17 27773511 27773529 CAGACAACTGTAGACCTGC 59 27771154 27771172 AACTGTTCCTTCACGTAGC 59 NA DesignNoJunction, InUTR Mus musculus 50 Arhgef15 ENSMUSG00000052921 ENSMUST00000065040,ENSMUST00000108671 3 2 3 98 11 68758327 68759882 ACAAGAATCCAGAAGGTTGG 59 68758248 68758266 GAAGATGCTTCCTCCTCTC 59 NA Mus musculus 50 Rnf26 ENSMUSG00000053128 ENSMUST00000065379,ENSMUST00000056328,ENSMUST00000093858 1 3 3 60 9 43920656 43920674 TGAACATGGTCTCCAATGG 59 43920614 43920634 GCAATAGCACATATGTCACAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Camk2d ENSMUSG00000053819 ENSMUST00000066466,ENSMUST00000066452 3 2 9 102 3 126504672 126513568 GGGTAAAGGAGTCAACTGAG 59 126537519 126537537 GCTTCAATCAGTTGCTCAG 59 NA Mus musculus 50 Mat2a ENSMUSG00000053907 ENSMUST00000059472 1 1 2 125 6 72385066 72385084 CATCCATTGTCGATCTCCA 59 72384374 72384977 CTTCAGATCCAGATCCCTG 58 NA Mus musculus 50 H2-T18 ENSMUSG00000054128 ENSMUST00000025312,ENSMUST00000102675,ENSMUST00000095300 3 3 5 125 17 36323647 36323960 AAAGAACAATGGTGGAAACG 59 36323541 36323559 GGAAGATCCTTCATCCCAG 59 NA Mus musculus 50 Nkx2-4 ENSMUSG00000054160 ENSMUST00000067020 1 1 1 108 2 146910040 146910058 TTCAAGCAGCAGAAGTACC 59 146909950 146909968 TCTTGTAGCGATGGTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp819 ENSMUSG00000055102 ENSMUST00000032661,ENSMUST00000116324 2 2 2 60 7 50867978 50867996 GGTTGATTTCCCACATCAG 58 50871767 50871785 CATTTGGTGTGAGTCATGC 59 NA DesignNoJunction Mus musculus 50 Six3os1 ENSMUSG00000056364 ENSMUST00000070429 2 1 1 77 17 86014935 86014954 GGAATAGAAGAACTGCAGAG 57 86007182 86007200 TTCTTAGGAAACTCCGTCC 58 NA DesignNoJunction, InUTR Mus musculus 50 Ebf1 ENSMUSG00000057098 ENSMUST00000081265 2 1 3 83 11 44697446 44721415 ATCTGGAACATGCTACTCC 58 44721462 44721480 CTATGATGATCACAGTCGC 57 NA Mus musculus 50 Yipf1 ENSMUSG00000057375 ENSMUST00000106747 1 1 3 131 4 107013698 107017101 TTCCAGAAAGATGGAACCG 59 107017196 107017214 CATGCTCATCACTTTGCTG 59 NA Mus musculus 50 Lce1a1 ENSMUSG00000057609 ENSMUST00000074142 2 1 1 183 3 92452185 92452205 CAAAGATCTTGTGTACCTGGA 59 92450954 92450972 CTACAGCAGGAAGACACAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Mex3b ENSMUSG00000057706 ENSMUST00000082237 2 1 1 71 7 90017432 90017450 TAACAAGAACACGGCTCTC 59 90017485 90017503 ACTTGGATAGTGGTCTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rhox3 ENSMUSG00000059626 ENSMUST00000115203,ENSMUST00000081327 1 2 2 134 X 34795595 34795613 ACCATAGATTCACCCAGTG 58 34797585 34798752 GAAACCATCTCTTCACTATGG 58 NA Nonspecific Mus musculus 50 Dbp ENSMUSG00000059824 ENSMUST00000107741 3 1 3 223 7 52961131 52963646 CTGCTTGACATCTAGGGAC 59 52963832 52965044 ACTTCTCATCCTTCTGTTCC 59 NA DesignRelaxed Mus musculus 50 OTTMUSG00000002349 ENSMUSG00000060288 ENSMUST00000106317 2 1 5 60 4 118984036 118984149 GAGGAAGATCGAGTTCCAG 59 118983994 118984012 TAATGAATGGGTCCAAGCT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Rpl35a ENSMUSG00000060636 ENSMUST00000115075 1 1 5 286 16 33057157 33057175 GAAATAGTGACAGGTGGGA 58 33058772 33058790 GTTTACCTCCAGGAGTCAC 59 NA DesignNoJunction, InUTR Mus musculus 50 Cd302 ENSMUSG00000060703 ENSMUST00000074606 1 1 2 82 2 60095143 60095161 CCAAGACAGGTGAATGGAG 59 60093144 60095097 GTCATATGGGATTGCTGCT 59 NA Mus musculus 50 Olfr151 ENSMUSG00000061165 ENSMUST00000072430 3 1 1 60 9 37537941 37537962 CTGGATTTGACATTATCGTCAC 59 37537902 37537920 GACAGGATGAATGCATAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 4931433A01Rik ENSMUSG00000061298 ENSMUST00000080744 2 1 6 164 4 111289829 111289849 CTTCTACAGCTACATCATTGG 58 111329017 111329705 AACCTAAATCGAAGTCTTGG 57 NA Mus musculus 50 Pclo ENSMUSG00000061601 ENSMUST00000071768 1 1 3 80 5 14680009 14680029 TACAGGTCAGTATGATGTAGC 58 14680070 14680093 GGATACTGTTCTGAAACGAG 57 NA Mus musculus 50 Ctnna2 ENSMUSG00000063063 ENSMUST00000079296,ENSMUST00000075340 1 2 2 88 6 76869933 76869951 GATGTCATTAATGCTGCCA 58 76865852 76869881 GAATCAGGACACTGATCAG 57 NA Mus musculus 50 Ptpmt1 ENSMUSG00000063235 ENSMUST00000111461,ENSMUST00000077874 1 2 2 60 2 90757614 90757633 ACTATGAACGAGGAGTACGA 59 90754320 90757592 CTTTCTTCCATTCCTTCGAG 58 NA DesignRelaxed Mus musculus 50 Cd209b ENSMUSG00000065987 ENSMUST00000111014 2 1 3 81 8 3918822 3918933 CATTCTGGAAGGAGATTCCA 59 3918760 3918778 CAGCAAATTCGACACAGTC 59 NA Mus musculus 50 OTTMUSG00000015846 ENSMUSG00000068062 ENSMUST00000089083 1 1 1 79 2 152196648 152196666 GAGTGACCCTTTAGTGCAG 59 152199538 152199556 CTACAGTGCTGACTCATGG 59 NA DesignNoJunction, InUTR Mus musculus 50 1200003I07Rik ENSMUSG00000068134 ENSMUST00000109931,ENSMUST00000094538 2 2 3 142 2 149945675 149962310 CGACATGGATATAGTGACCT 58 149943928 149945570 CTTTCATGCCTATAGCAGC 58 NA Mus musculus 50 Dap3 ENSMUSG00000068921 ENSMUST00000090938,ENSMUST00000107491 1 2 2 84 3 88734454 88734472 GAAAGACCCTCAGTCTCTG 58 88733439 88734406 CAAAGATGAGCATCTGGGA 59 NA Mus musculus 50 Pde7a ENSMUSG00000069094 ENSMUST00000091314 3 1 2 83 3 19160288 19164833 GGATCACCTCTAAGAGACG 58 19156853 19160241 GGACATCTCCTAGCATACG 59 NA Mus musculus 50 Zbtb10 ENSMUSG00000069114 ENSMUST00000091353 2 1 1 94 3 9280089 9280108 ATTATTGCCAGAATCTTGGC 58 9280323 9280341 CATAGCTACAATGAGGGCA 59 NA DesignNoJunction Mus musculus 50 Prl2b1 ENSMUSG00000069258 ENSMUST00000102954 2 1 2 137 13 27475498 27476992 TTCAAAGCATGATTGGAGAG 58 27475380 27475398 TTCGAGAATCTCTGAGCAG 58 NA Mus musculus 50 Sco1 ENSMUSG00000069844 ENSMUST00000092996,ENSMUST00000108690 3 2 2 100 11 66869423 66870030 GGAGATAGACAGTATTCCATCC 59 66870089 66870109 CTTTCACATAAGTCGCAATGG 59 NA Mus musculus 50 9530015I07Rik ENSMUSG00000074472 ENSMUST00000091508 2 1 1 108 9 22001609 22001627 GGAAACCGTTGATAACCTG 58 22003862 22003880 TCTCTGTTCTACATGAGCA 57 NA DesignNoJunction Mus musculus 50 Tox2 ENSMUSG00000074607 ENSMUST00000109428 2 1 3 80 2 163028995 163073518 CAAGTTTGATGGTGACAGTG 59 163073561 163101715 CTGTTATAGGTCTGGCTGG 59 NA Mus musculus 50 OTTMUSG00000010207 ENSMUSG00000078514 ENSMUST00000061572,ENSMUST00000105776 2 2 2 68 4 143145629 143146123 TTTCACCCAAGAAAGAGGA 58 143146155 143146173 AACATCCCAGAAGTGATGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Mup2 ENSMUSG00000078680 ENSMUST00000060932,ENSMUST00000098047 1 2 2 83 4 60592928 60593561 TTCTGTGACGTATGATGGA 57 60592863 60592881 TCGTTAATGAGATGAGCCA 58 NA Nonspecific Mus musculus 50 Pms2 ENSMUSG00000079109 ENSMUST00000085710,ENSMUST00000110710,ENSMUST00000110709 2 3 3 66 5 144680470 144682895 CAGCAAAGGTCTCTAAGCT 59 144682925 144682943 ACAAATGGGTACTGATGCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Mphosph8 ENSMUSG00000079184 ENSMUST00000116468,ENSMUST00000022503 2 2 2 80 14 57315512 57315530 ATTCATTCAGTCCTGTTGC 58 57315574 57315980 TTAGCAACTTAACCTTGGC 57 NA Mus musculus 50 3110007F17Rik ENSMUSG00000079450 ENSMUST00000113343,ENSMUST00000113348,ENSMUST00000113345 3 3 4 75 X 120231145 120231164 AGTGATGTAAACCAGATCCA 58 120256242 120256260 GACTTGTTTAGCAGGACCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Rab7 ENSMUSG00000079477 ENSMUST00000113597 3 1 5 167 6 87965703 87969638 AAAGTGGAGGCTTTAGGAC 59 87962417 87963639 TCTTTCCAACACCAGAGTC 59 NA InUTR Mus musculus 50 A2AMP4_MOUSE ENSMUSG00000079483 ENSMUST00000113635 1 1 2 137 X 99045165 99045184 GAGGATGATGAAGAATTGCT 57 99271529 99271547 GTTAAACAACGAGTGTCGA 57 NA DesignNoJunction Mus musculus 50 Rpl41 ENSMUSG00000069648 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-466b-1 ENSMUSG00000077060 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-511 ENSMUSG00000077897 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Zfp385a ENSMUSG00000000552 ENSMUST00000087898 1 1 1 83 15 103146369 103146387 CTAAGCGTCTGCTCTACTG 59 103146219 103146325 GCTTAGTACCTTTGTTATGTGC 59 NA Mus musculus 50 Col6a1 ENSMUSG00000001119 ENSMUST00000001147 2 1 1 62 10 76173712 76173730 ACATAACAGCCCAGATCTG 59 76172918 76173100 AGAATGTGATTGGACAGGT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Pfdn5 ENSMUSG00000001289 ENSMUST00000001335 3 1 1 134 15 102157272 102158962 ACGAGTTCTATGTACGTCC 58 102159174 102159193 GGTGAGGAAGTCTATCTTCC 58 NA Mus musculus 50 Ccne1 ENSMUSG00000002068 ENSMUST00000108023 2 1 1 60 7 38884292 38884313 CTGCTTTGTATCATTTCTCCTC 59 38884156 38884272 CACCACTGATAACCTGAGAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Mrpl2 ENSMUSG00000002767 ENSMUST00000002844,ENSMUST00000113429,ENSMUST00000113430 1 3 3 115 17 46785317 46785428 GATCCTTGTAGGTCTGCAG 59 46785504 46785525 CCTATGTGATTAGAGTTCAGGA 58 NA Mus musculus 50 D10Bwg1364e ENSMUSG00000003346 ENSMUST00000095435,ENSMUST00000003436 1 2 2 168 10 80047028 80047047 GTATCATCCTGTATGGCCAG 59 80046800 80046898 TTCTCGATGTTAGGGAAAGC 59 NA Mus musculus 50 Prkcsh ENSMUSG00000003402 ENSMUST00000115331,ENSMUST00000003493 2 2 2 82 9 21816680 21816698 TCTCCTTTGATTTCGGTCC 59 21816743 21817132 GTAGACGTACTCATTGGTGG 59 NA Mus musculus 50 Ctse ENSMUSG00000004552 ENSMUST00000073350,ENSMUST00000116536 1 2 2 80 1 133568909 133569027 CCATTGATGGAGAATATGCA 57 133569070 133569088 ATGAAACCTCGTTGATGAG 57 NA Mus musculus 50 Nes ENSMUSG00000004891 ENSMUST00000090973 1 1 1 194 3 87777029 87778733 CTACATACAGGACTCTGCTG 59 87779435 87779453 CAAGGGTATTAGGCAAGGG 59 NA Mus musculus 50 Msh6 ENSMUSG00000005370 ENSMUST00000005503 1 1 1 80 17 88386252 88386270 CGCTTGTTCTGTAACTTCG 59 88386313 88387536 CAGTAAGACATCCAACACTG 58 NA Mus musculus 50 Psmd4 ENSMUSG00000005625 ENSMUST00000107237,ENSMUST00000071664 1 2 2 80 3 94839207 94839225 GGCAAGAATCACAAGATGC 59 94838918 94839163 AGCTAGTTTCACCAGATCC 58 NA Mus musculus 50 Kctd20 ENSMUSG00000005936 ENSMUST00000057174 2 1 1 85 17 29100240 29100258 TATCCCAGACCTCAGAGAC 59 29100307 29100914 GTAGAGCACTCAGATCCTG 58 NA Mus musculus 50 Prg4 ENSMUSG00000006014 ENSMUST00000006171,ENSMUST00000111902,ENSMUST00000111901 1 3 3 80 1 152300664 152301193 CCATGCTTTCAGATGAGAC 58 152300602 152300620 CAACTAATGTCCCATTGCG 59 NA Mus musculus 50 Slc5a6 ENSMUSG00000006641 ENSMUST00000080431,ENSMUST00000114668,ENSMUST00000114665,ENSMUST00000006817 1 4 4 129 5 31345425 31345443 GATCTTCCGATTTGGAACC 58 31345009 31345332 CTCTAGGTACTCATAGGCG 58 NA Mus musculus 50 B4galnt1 ENSMUSG00000006731 ENSMUST00000006914 1 1 1 123 10 126604589 126604767 GATATACCAGGTGAACCTGAG 59 126604852 126604870 TTTATCCAGAACTGGGCTG 59 NA Mus musculus 50 Mettl1 ENSMUSG00000006732 ENSMUST00000006915 3 1 1 112 10 126482176 126482345 AAGAGCTAAGTGAAGACCC 58 126482421 126482439 CTGTATTCTTCGGAAGACG 57 NA Mus musculus 50 Ddah2 ENSMUSG00000007039 ENSMUST00000007255 2 1 1 149 17 35198481 35198499 AGTGACTGTCTCTTTCTGC 59 35198777 35198795 CTTCTCCAGTTCTGAGCAG 59 NA DesignNoJunction Mus musculus 50 Clstn3 ENSMUSG00000008153 ENSMUST00000008297 1 1 1 160 6 124414448 124414466 CTGCTTCAAATCAGCTCTG 58 124411736 124412136 CAGATCTCACCTGCATAGC 59 NA DesignRelaxed Mus musculus 50 Lmbr1 ENSMUSG00000010721 ENSMUST00000055195 1 1 2 80 5 29619416 29619434 TGATTCTTGGGATGGTGTG 59 29618752 29619376 CCCAGAGATCATATAAAGACTCC 59 NA Mus musculus 50 Sf4 ENSMUSG00000011306 ENSMUST00000011450 2 1 1 100 8 72572568 72576496 TCATCCTGGAGAAATTGCT 58 72576560 72576578 GTGCCTTCTGTAACTTCAG 58 NA Mus musculus 50 Atad1 ENSMUSG00000013662 ENSMUST00000070210 1 1 1 80 19 32770330 32770348 TACAGCGATGATGAAAGCT 59 32761799 32770287 CCCATTACTATAACCTGGCA 58 NA Mus musculus 50 Cnksr3 ENSMUSG00000015202 ENSMUST00000015346,ENSMUST00000105621 2 2 2 62 10 3217473 3217492 TGGATCTATACATCCCTCCC 59 3217517 3219714 AACTCACATTCTCATCCCG 59 NA DesignNoJunction Mus musculus 50 Pcolce2 ENSMUSG00000015354 ENSMUST00000015498 1 1 1 80 9 95587252 95593290 AACTACAGGTCTAAAGCCC 58 95593333 95593352 GAACAGTAATTGCTCTCCAG 58 NA Mus musculus 50 Clpx ENSMUSG00000015357 ENSMUST00000015501,ENSMUST00000113824 1 2 2 80 9 65166487 65166508 GAAGTAGATAAGATTGGCAGTG 58 65166548 65168634 TAATAAACCTTGCTGAACGC 58 NA Mus musculus 50 Kctd2 ENSMUSG00000016940 ENSMUST00000103035,ENSMUST00000106534,ENSMUST00000106533 1 3 3 80 11 115288779 115288797 GTGTCAAGAGGAAGAGCTC 59 115288840 115290610 GAGCCAATGCTGATTAACTG 59 NA Mus musculus 50 Nt5c3l ENSMUSG00000017176 ENSMUST00000107398,ENSMUST00000107399,ENSMUST00000092688,ENSMUST00000092689,ENSMUST00000107397 1 5 6 82 11 100301392 100301510 CTTCTTCCCACAATATTCTGG 58 100297531 100297549 ATAGTGGTGAAAGAGCTCG 59 NA Mus musculus 50 Crk ENSMUSG00000017776 ENSMUST00000108426 2 1 4 87 11 75493101 75493119 ACTACATCATCAACAGCAG 57 75516871 75516889 TAACCTTTACCAGCTCACC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Syne1 ENSMUSG00000019769 ENSMUST00000056571,ENSMUST00000116266,ENSMUST00000041639 2 3 5 80 10 4987531 4987549 TCGAGACCTTAAACAGCAG 59 4987592 4988065 GCTCTTGCATATTGCTTGAC 59 NA Mus musculus 50 Sgk1 ENSMUSG00000019970 ENSMUST00000100036,ENSMUST00000092673,ENSMUST00000020145 1 3 3 81 10 21715853 21715874 GCAGAAGAAGTATTCTATGCAG 58 21715913 21716047 CTGACATAATATGCTTCTCCTC 58 NA Mus musculus 50 Rad50 ENSMUSG00000020380 ENSMUST00000020649,ENSMUST00000102756,ENSMUST00000108933 3 3 3 87 11 53511809 53512331 GCAACAAGGTACATTAAAGC 57 53511741 53511759 TCAATTCCGTTTGACACTC 57 NA Mus musculus 50 1700086D15Rik ENSMUSG00000020548 ENSMUST00000108696,ENSMUST00000020855 1 2 2 100 11 64966495 64966513 ATGCTCATTGAGGATCGTC 59 64966131 64966431 TCTCTTTCTGCTGAAGCTC 59 NA Mus musculus 50 Sec14l1 ENSMUSG00000020823 ENSMUST00000090433,ENSMUST00000021177,ENSMUST00000103026 2 3 3 92 11 116978558 117002742 ATTATGGCTGCCTATGAGAG 59 117002797 117002815 ATCCTCACTCTTGAACTCG 58 NA Mus musculus 50 Pole2 ENSMUSG00000020974 ENSMUST00000021359 2 1 1 80 12 70313974 70313992 ACTGGACCTTAGTAAAGCT 57 70312420 70313215 TCTTCAAACCAACCTTCTG 57 NA Mus musculus 50 Agtpbp1 ENSMUSG00000021557 ENSMUST00000022040,ENSMUST00000091573,ENSMUST00000109830 2 3 3 83 13 59596999 59598344 AACCCTACCTATACCACTCC 59 59596935 59596954 AATTACTTTGCGCAGATTCC 59 NA Mus musculus 50 Vcl ENSMUSG00000021823 ENSMUST00000022369 1 1 2 100 14 21848593 21849013 CTCTTACAGGTATGCGAGC 59 21849077 21849095 TCATCACTGATGTTGGTCC 59 NA Mus musculus 50 Vcl ENSMUSG00000021823 ENSMUST00000090432 1 1 2 199 14 21848592 21849012 TCTCTTACAGGTATGCGAG 58 21850876 21850895 TTTGATTGAAGCAGCTCAG 58 NA Mus musculus 50 Glt8d1 ENSMUSG00000021916 ENSMUST00000022476 2 1 1 80 14 31824199 31824310 GATGAAGCTCAATGTAGAAGAG 58 31824350 31824369 AATACGATAAGCAGAGGAGG 58 NA Mus musculus 50 Lats2 ENSMUSG00000021959 ENSMUST00000038381 3 1 3 81 14 58341585 58341606 CTTCATAAGGAAGGTATCAGTG 57 58341377 58341544 AGGAATATGCATTGTTGACC 58 NA Mus musculus 50 Ccdc25 ENSMUSG00000022035 ENSMUST00000022614 2 1 1 81 14 66475719 66479011 AATGGATGAACTTAGGAGCT 58 66483969 66483987 CTCATCGGAATCGTTACCA 59 NA Mus musculus 50 Dad1 ENSMUSG00000022174 ENSMUST00000022781 2 1 1 209 14 54862527 54873308 GGTTTGCCTGAGAATACAG 58 54855351 54855369 CTCAAGAATGCTGATCCAG 57 NA DesignNoJunction, InUTR Mus musculus 50 Gsdmd ENSMUSG00000022575 ENSMUST00000023238 3 1 1 107 15 75695537 75695860 TATGCTTGAAGGGTGAAGG 59 75695930 75695949 TAGAGCCAATAAGCAGTTGG 59 NA Mus musculus 50 Ly6c1 ENSMUSG00000022584 ENSMUST00000100542 1 1 1 194 15 74942072 74942090 GTACTCACGCTACAAAGTC 57 74939167 74940944 TCCTTCTTTGAGAGTCCTC 57 NA Mus musculus 50 Kng1 ENSMUSG00000022875 ENSMUST00000023589 2 1 3 148 16 23077627 23079050 GCCAAGCATTAGATATGACTG 58 23079160 23079178 TTCAGTTTCTGCATCCCTC 59 NA DesignRelaxed Mus musculus 50 Pcdhgc5 ENSMUSG00000023036 ENSMUST00000061279 3 1 9 122 18 37918009 37984680 GACAGATATTCAGCAAGCC 58 37992950 37992969 GTATCAAACTGGTTGTTGGG 59 NA DesignNoJunction Mus musculus 50 Gnb3 ENSMUSG00000023439 ENSMUST00000024206 2 1 1 109 6 124787843 124787861 AGATCTATGCCATGCACTG 59 124787560 124787692 GATTGCATGCACCTTATTGG 59 NA Mus musculus 50 Tiam2 ENSMUSG00000023800 ENSMUST00000072156 3 1 1 80 17 3503046 3505713 AAGTCTTACGTGAAGGATCTG 59 3505753 3505773 ATCTTGGGTAAGAAAGGTCTC 59 NA Mus musculus 50 Riok2 ENSMUSG00000023846 ENSMUST00000024620 3 1 1 80 17 17522623 17524033 CTTCAGTGATATCAGGAAGGA 58 17524075 17524093 TCATCTGCTTGCATTTCCT 59 NA Mus musculus 50 1500032D16Rik ENSMUSG00000024038 ENSMUST00000064798 2 1 3 64 17 31658575 31658593 CAGAGTCAGAGAAGAGTGC 59 31658620 31668056 CTCTTTGAGCACACTTTGTG 59 NA DesignNoJunction Mus musculus 50 Galnt14 ENSMUSG00000024064 ENSMUST00000024858,ENSMUST00000112591 2 2 2 93 17 73924209 73924227 TCCCTACAAACTGTATGCT 57 73894454 73924153 CAGCGAACATCTCTTATGAC 58 NA Mus musculus 50 Cyp1b1 ENSMUSG00000024087 ENSMUST00000024894 1 1 1 89 17 80112664 80112682 ATTACGGACATCTTCGGAG 58 80110006 80112611 CTGAACATCCGGGTATCTG 59 NA Mus musculus 50 9130404H23Rik ENSMUSG00000024105 ENSMUST00000024914 1 1 1 102 17 66905597 66908897 AAATCTGCTAGGTGAGACC 58 66905513 66905531 TTGTCTCATCGTTGTCCTG 59 NA Mus musculus 50 Sbp ENSMUSG00000024125 ENSMUST00000024939 2 1 1 60 17 24090700 24091571 AAGTTCATCAAGGGCTTCC 59 24090658 24090677 GGGATCCATAGACATCAGTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Srbd1 ENSMUSG00000024135 ENSMUST00000024951 2 1 3 80 17 86538582 86541712 TCTTCTCTGAGTTGTCATCTG 59 86538522 86538542 TTCTGGGAACTTTCTTCTGAG 59 NA Mus musculus 50 Gbl ENSMUSG00000024142 ENSMUST00000070888 1 1 1 81 17 24615097 24615272 AGGACTCTCAGGTAAATGC 58 24614949 24614967 TACATGCGGATATGTTGGT 58 NA Mus musculus 50 Pot1b ENSMUSG00000024174 ENSMUST00000086876 2 1 1 80 17 55832070 55832088 CAGCTACAGAATCTGGTGG 59 55827245 55832027 AAAGCTTCCGATCTTTAGGG 59 NA Mus musculus 50 Bat3 ENSMUSG00000024392 ENSMUST00000087274,ENSMUST00000025250 3 2 2 93 17 35282100 35282118 CCAGGTGTGGATATCATCC 59 35282175 35282282 ATCCACTGTCTGTACAGTG 58 NA Mus musculus 50 Centd3 ENSMUSG00000024451 ENSMUST00000042944,ENSMUST00000115603 3 2 2 91 18 38141672 38141690 CTCAAACGCTTCTTTCGAG 59 38141053 38141617 TTCTTCTGGGAAAGCTCTG 59 NA Mus musculus 50 Txnl4a ENSMUSG00000024571 ENSMUST00000025463 1 1 1 125 18 80406864 80408164 TTTAAAGCAAACGGTGCTG 59 80408253 80408271 TGTTCATCAGGTCATCTGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Adrbk1 ENSMUSG00000024858 ENSMUST00000088737,ENSMUST00000113837,ENSMUST00000025791 1 3 3 80 19 4288497 4288599 TACAGAAGTACCCTCCTCC 59 4288435 4288453 CATCAAAGGAGCCAATGTC 58 NA Mus musculus 50 2700046G09Rik ENSMUSG00000024893 ENSMUST00000025824 1 1 1 69 19 32464300 32464318 GAAAGATGTTTGGACAGCC 59 32464351 32464369 ATCACCATCCAAGCTAACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000041717,ENSMUST00000111662,ENSMUST00000086848,ENSMUST00000061496,ENSMUST00000078917,ENSMUST00000111659,ENSMUST00000111651,ENSMUST00000111649,ENSMUST00000111653,ENSMUST00000111656,ENSMUST00000111646 3 11 15 91 19 55985160 55987055 GTTAGTACCACAGCAAGGT 59 55987110 55987128 TAGATGCGTTGACTGTCAG 59 NA Mus musculus 50 Sectm1a ENSMUSG00000025165 ENSMUST00000026162,ENSMUST00000106119,ENSMUST00000100126 2 3 4 84 11 120930352 120930370 ACGCTCTTTACATCCTTCC 59 120929584 120930007 CCACCTTACCTCAAGTCAG 59 NA InUTR Mus musculus 50 St8sia5 ENSMUSG00000025425 ENSMUST00000075290,ENSMUST00000079618 2 2 2 80 18 77484884 77484902 CAGGTATGAGGTGGAATCC 59 77484946 77487189 TAGTAGGGCATTTCCTTGG 58 NA Mus musculus 50 Apool ENSMUSG00000025525 ENSMUST00000113415 3 1 3 158 X 109425016 109425034 GAGAGGGTCATAGGTATGG 57 109459957 109463418 ATAAATGCTCTTGCACCAG 58 NA InUTR Mus musculus 50 4930412O13Rik ENSMUSG00000025783 ENSMUST00000026889 1 1 2 94 2 9804683 9804701 TTAATTCGATTCCGTGCAC 58 9804758 9805431 GTATTTCAGCTTCACAACCA 58 NA Mus musculus 50 Creb1 ENSMUSG00000025958 ENSMUST00000049932,ENSMUST00000087366,ENSMUST00000027097 1 3 4 134 1 64597533 64605083 ACATTAGCCCAGGTATCCA 59 64605181 64605199 CTGGATAACTGATGGCTGG 59 NA Mus musculus 50 Inpp4a ENSMUSG00000026113 ENSMUST00000027287 3 1 3 81 1 37426262 37426281 AGATTGTCACCCAGTATCAG 58 37426324 37428556 AAGGAAGGACCTTTGTACTG 59 NA Mus musculus 50 1110058L19Rik ENSMUSG00000026154 ENSMUST00000027338 1 1 1 88 1 24010051 24010069 TAAGAAGTCAAAGCTGCCA 59 24003185 24009999 CATCATCCGGAAACTTCTG 58 NA Mus musculus 50 Bcs1l ENSMUSG00000026172 ENSMUST00000027358,ENSMUST00000113732,ENSMUST00000113733 1 3 3 82 1 74636379 74636397 TACCTTCAGCATGAAAGTG 57 74636442 74636542 CCCTGATACCAAATGAAGTG 58 NA Mus musculus 50 Pecr ENSMUSG00000026189 ENSMUST00000027381,ENSMUST00000097698 1 2 2 91 1 72316909 72316928 GAAGGTGTTTACAACCTCAC 58 72314078 72316855 GAGTAAATGGTCCCAGGAG 59 NA Mus musculus 50 Atic ENSMUSG00000026192 ENSMUST00000027384 1 1 1 80 1 71617490 71619487 ACTGTGTTCTTCAGATGGAC 59 71619530 71619548 TCTGGCTTAAACGAAGACC 59 NA Mus musculus 50 Nr5a2 ENSMUSG00000026398 ENSMUST00000027649 2 1 1 80 1 138787370 138836994 GAACTGAAGGTTGATGACC 58 138787308 138787326 TTGTCGGTAAATGTGATCG 57 NA Mus musculus 50 Ube2t ENSMUSG00000026429 ENSMUST00000027687 1 1 1 80 1 136865820 136865841 ATACTAGGTGGAGCTAATACAC 58 136865881 136867839 TTCAAATGGGTACCTCTCAG 59 NA Mus musculus 50 Olah ENSMUSG00000026645 ENSMUST00000027955,ENSMUST00000115087 2 2 2 82 2 3265564 3265582 TAGCTGAGGAAGTTGTGAC 58 3264156 3265518 GTAGGATCCGAAACTGTGG 59 NA Mus musculus 50 Usp20 ENSMUSG00000026854 ENSMUST00000102849,ENSMUST00000061544 1 2 2 118 2 30854380 30855586 AAATCTAAGGGAACCTGCC 59 30858113 30858131 TGAATGCTGCTATGGTCAG 59 NA Mus musculus 50 Cd82 ENSMUSG00000027215 ENSMUST00000028644,ENSMUST00000099696,ENSMUST00000111257,ENSMUST00000111256,ENSMUST00000116457 3 5 5 81 2 93274082 93277554 GCTGTTCTTTATCCTGGGT 59 93274019 93274037 TAGGACGGAAATGAAGCTG 59 NA Mus musculus 50 Itpka ENSMUSG00000027296 ENSMUST00000028758 2 1 1 80 2 119575304 119575416 ATGGGTGTCAGAACTTACC 58 119575458 119575478 CTTCTTATACATGTCCTTCCG 57 NA Mus musculus 50 2610510H03Rik ENSMUSG00000027349 ENSMUST00000028825 3 1 1 81 2 117093613 117093634 AAGATCTGTCCAAGATCATCAG 59 117093673 117096352 CCCATAAGCACCTTATTAATGG 58 NA Mus musculus 50 Cst3 ENSMUSG00000027447 ENSMUST00000028938 2 1 1 74 2 148698580 148698599 CAAATTTGACTGACTGTCCT 58 148697752 148697770 TGTAGATCTGGAAGGAGCA 59 NA DesignNoJunction Mus musculus 50 Rab22a ENSMUSG00000027519 ENSMUST00000029024,ENSMUST00000109110 1 2 2 106 2 173520775 173520793 CTGAAGAACTGGGTGAGAG 59 173520862 173521405 CTCTCCATGACTTCTCTGAC 59 NA Mus musculus 50 Slc7a11 ENSMUSG00000027737 ENSMUST00000029297 1 1 1 86 3 50185856 50185874 ATTCTCATTAGCAGTCCCG 59 50184982 50185807 TAGAATAACCTGGAGACAGC 58 NA Mus musculus 50 Slc7a11 ENSMUSG00000027737 ENSMUST00000029297 2 1 1 87 3 50185856 50185874 ATTCTCATTAGCAGTCCCG 59 50184981 50185807 GTAGAATAACCTGGAGACAGC 59 NA Mus musculus 50 Schip1 ENSMUSG00000027777 ENSMUST00000029346,ENSMUST00000044717 2 2 2 92 3 68400180 68420370 CTTTCTGCAAGACTACAGAG 57 68420425 68420443 CTTACTGTCATCTGCATCG 57 NA Mus musculus 50 Pmf1 ENSMUSG00000028066 ENSMUST00000056370,ENSMUST00000075250,ENSMUST00000090958 3 3 3 228 3 88199925 88199943 CATCAAGTACGGAAACAGG 58 88198381 88198399 CATTACTGCCTGGAAACTG 58 NA DesignNoJunction, InUTR Mus musculus 50 Tnrc4 ENSMUSG00000028137 ENSMUST00000029784 1 1 1 146 3 94293395 94293414 TTTGTGAGTTTCGACAATCC 58 94293523 94295066 GTATCTCCAGACCTGAAGC 59 NA InUTR Mus musculus 50 Map3k7 ENSMUSG00000028284 ENSMUST00000037607,ENSMUST00000080933,ENSMUST00000108184,ENSMUST00000108183 2 4 4 80 4 32065444 32066722 GTATAATGTGCTGCATGGTG 59 32066765 32066783 TGGGAACACTGTAAACACC 59 NA Mus musculus 50 Jak1 ENSMUSG00000028530 ENSMUST00000102781 3 1 1 85 4 100854545 100856956 TATCTGTTTGCACAGGGAC 59 100854478 100854497 ATATCATGTCCGTCTTGCTC 59 NA Mus musculus 50 Rragc ENSMUSG00000028646 ENSMUST00000072215,ENSMUST00000030399 1 2 2 262 4 123602132 123607095 GATTAAAGGAAGATGGAAGTGG 58 123612875 123612893 TTTCAGACTTGGAGCACTG 59 NA DesignNoJunction Mus musculus 50 Pnrc2 ENSMUSG00000028675 ENSMUST00000030436 3 1 1 126 4 135428365 135428823 AAGCAAACTGAAAGGTGAC 58 135428257 135428275 TGATCCTTGCTCTTCTGTC 58 NA InUTR Mus musculus 50 Pla2g2e ENSMUSG00000028751 ENSMUST00000030531,ENSMUST00000105803,ENSMUST00000105804 2 3 3 99 4 138436675 138438331 AGACAACATCTTCTGTGCT 58 138438394 138438412 GTAAGTGTTCAGGTTGTGG 58 NA DesignNoJunction Mus musculus 50 Cda ENSMUSG00000028755 ENSMUST00000030535 2 1 1 182 4 137899471 137907108 CCATCTCTAGTGACTTGCA 58 137894801 137894819 ACTGAATCTTCTGCAGGTC 59 NA Mus musculus 50 Rhd ENSMUSG00000028825 ENSMUST00000030627 2 1 1 94 4 134440589 134441175 ATCAACATGGTTCACATCCA 59 134441232 134441250 ACCATGGAAATCCAAGGTG 59 NA Mus musculus 50 Arhgef19 ENSMUSG00000028919 ENSMUST00000006618,ENSMUST00000105792 1 2 3 84 4 140805054 140805151 CAGTGAGAGGTTCCTTCAC 59 140805199 140805217 ATGGTGTAGAACCACATCG 59 NA Mus musculus 50 Galntl5 ENSMUSG00000028938 ENSMUST00000030778 1 1 1 121 5 24692003 24692021 GCACCTTGAACAAGAAGAC 58 24692105 24695656 TAACCTCATCATGAGTGACG 59 NA Mus musculus 50 Slc25a33 ENSMUSG00000028982 ENSMUST00000105686 1 1 1 80 4 149130254 149136489 CTACAGGTTCTGAAATCAATCC 58 149130195 149130214 AACTCCAACCAAATTTGGAC 58 NA Nonspecific Mus musculus 50 Sorcs2 ENSMUSG00000029093 ENSMUST00000037370,ENSMUST00000070720 3 2 2 100 5 36496570 36571810 GAAAGTTCTCTGTGGAGGT 58 36496488 36496507 GGGCAGATATAGAAGTTGTC 57 NA DesignNoJunction Mus musculus 50 Stx18 ENSMUSG00000029125 ENSMUST00000031008,ENSMUST00000114126,ENSMUST00000042146 1 3 3 80 5 38519283 38519301 GCAAATCGAAGGGAAAGTC 59 38519345 38526471 ATCTCAGTTTCCTGTTGCA 59 NA Mus musculus 50 Gtf3c2 ENSMUSG00000029144 ENSMUST00000067186,ENSMUST00000114632,ENSMUST00000114631 2 3 5 98 5 31447117 31447628 CAACTACTATCTCTGGCCT 57 31444188 31444206 TTCCAGACAATAGCAACAC 57 NA Mus musculus 50 Dhx15 ENSMUSG00000029169 ENSMUST00000031061 1 1 1 80 5 52553851 52557954 GCAATTGGAAGAAAGGTGG 59 52553789 52553809 GTCAATTACAAACACCACACC 59 NA Mus musculus 50 Pdcl2 ENSMUSG00000029235 ENSMUST00000031145 1 1 1 92 5 76741613 76746836 CAAGCTAGAAGAACTTGAATGG 59 76741542 76741560 ATCATATCTGCAATGCCCT 58 NA Mus musculus 50 Cds1 ENSMUSG00000029330 ENSMUST00000031273 2 1 1 80 5 102226050 102226068 CATGAGATCATCACCATCG 57 102226111 102227405 GAGGAAGTACCAACTTAGTG 57 NA Mus musculus 50 Prkg2 ENSMUSG00000029334 ENSMUST00000031277 2 1 1 81 5 99395581 99395601 GACTAGGCATCATCTACAGAG 59 99376543 99395540 CCAAAGTCAACCAACTTAAGG 59 NA Mus musculus 50 Snx8 ENSMUSG00000029560 ENSMUST00000031539 2 1 1 95 5 140820802 140822241 AGTCCTACAAAGACCTGTG 58 140820725 140820743 TCATCTGCCTCTTCATCAG 58 NA Mus musculus 50 Erp29 ENSMUSG00000029616 ENSMUST00000111802 1 1 1 80 5 121895571 121897157 GATCTCAGACTATGGCGAC 59 121895509 121895528 TAGAAGACTGGGTAGCTCTC 59 NA Mus musculus 50 Foxp1 ENSMUSG00000030067 ENSMUST00000113326,ENSMUST00000113328,ENSMUST00000113324,ENSMUST00000113322,ENSMUST00000074346,ENSMUST00000113329,ENSMUST00000092485,ENSMUST00000075832,ENSMUST00000113319 2 9 10 75 6 99112987 99113006 CAAGAATCTGGGTCTGAGAC 59 99112931 99112949 CTAGTAAGTGGTTGCCACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ret ENSMUSG00000030110 ENSMUST00000032201,ENSMUST00000088790 3 2 2 82 6 118114792 118114810 CTGAACGACTCTTCAACCT 59 118113293 118114747 CATCAGACGGTACATTTCCT 59 NA Mus musculus 50 Erp27 ENSMUSG00000030219 ENSMUST00000032343 3 1 1 82 6 136868436 136868454 CAACCATTCTGAGGTCCTG 59 136860148 136868393 GTAGTTGTTGATCATCAACCAG 59 NA Mus musculus 50 Pzp ENSMUSG00000030359 ENSMUST00000112132 2 1 1 154 6 128435659 128435677 TAACCAATCAAACCCTCGG 59 128433734 128434889 TTGTTCAGAGCCATCACTG 59 NA Mus musculus 50 Zfp606 ENSMUSG00000030386 ENSMUST00000098822 1 1 1 80 7 13075385 13077715 GTTGTCCAGAGTGGATGAG 59 13077759 13077777 TGCTGGATTGTTCTTCCTC 59 NA Mus musculus 50 SGK69_MOUSE ENSMUSG00000030433 ENSMUST00000032598 1 1 1 130 7 4910436 4910454 TAATCACCTTCATCCAGCC 59 4909208 4909226 ATTCTCTGGCTTCAAGTCC 59 NA DesignNoJunction Mus musculus 50 Asb7 ENSMUSG00000030509 ENSMUST00000078538 3 1 2 104 7 73792807 73804549 ACAAGACGTCACAAGACAG 59 73792721 73792739 ATTGGTAGCTCATCAAGCA 58 NA Mus musculus 50 Lrfn1 ENSMUSG00000030600 ENSMUST00000108288 3 1 2 60 7 29245038 29245056 CCAAGTGCAATACAACAGC 59 29245080 29251623 GGTAGAAGGGATCATCCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hapln3 ENSMUSG00000030606 ENSMUST00000032827 3 1 1 60 7 86262754 86262772 TCGTTATGATGTGTTCTGC 57 86262357 86262375 GTTCTCCAGGTAGTACACC 58 NA DesignNoJunction Mus musculus 50 Mrgprf ENSMUSG00000031070 ENSMUST00000033386 1 1 1 80 7 152489824 152493664 CCAGAACAAGATGTGTCCT 59 152493708 152493726 GTAGCAATCTGCTCAATGG 58 NA Mus musculus 50 Enox2 ENSMUSG00000031109 ENSMUST00000114914,ENSMUST00000114912,ENSMUST00000114918,ENSMUST00000033437,ENSMUST00000114916,ENSMUST00000114911 1 6 6 89 X 46378512 46393701 AGGAATCAGCCTTAGTGTC 58 46378441 46378459 CTACCTCATTCCGGTATGC 59 NA Mus musculus 50 Hcfc1 ENSMUSG00000031386 ENSMUST00000114372,ENSMUST00000033761 3 2 2 81 X 71201960 71201978 ATGGACGATGTCAAAGTGG 59 71200965 71201915 CCATGGTATCCAGGTTGAG 59 NA Mus musculus 50 Atp11a ENSMUSG00000031441 ENSMUST00000091237,ENSMUST00000033818 2 2 2 81 8 12828578 12828597 ATGTTTGATGAGGAAATGGG 58 12828641 12831097 AGATGTATTCCACCTGTCC 58 NA Mus musculus 50 Vegfc ENSMUSG00000031520 ENSMUST00000033919 3 1 1 93 8 55244754 55244772 GTGTCCGTCTACAGATGTG 59 55244828 55254388 TTTCAAACAACGTCTTGCTG 59 NA Mus musculus 50 Glb1l3 ENSMUSG00000031966 ENSMUST00000034448 2 1 1 80 9 26626072 26626090 GATATTGGGACATTGGACC 57 26625882 26626028 ACACGATAACCTCATTGTC 57 NA Mus musculus 50 2410004A20Rik ENSMUSG00000032214 ENSMUST00000034737 1 1 1 101 9 72950725 72950743 GATTTGGATATTCGGACCG 58 72950807 72951032 AGAGCCTCTATTTCCATCAG 58 NA Mus musculus 50 Fem1b ENSMUSG00000032244 ENSMUST00000034775 2 1 1 60 9 62644432 62644452 CTATACCTTTCTGTACCTCGT 58 62644392 62644410 CTGATCTTCTTCGCTACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Phip ENSMUSG00000032253 ENSMUST00000034787 1 1 1 80 9 82770844 82770865 GAGTTATGTAAAGATGTCAGGC 58 82770485 82770806 CATGCTGTAAATCCTTGATCTC 59 NA Mus musculus 50 Tbx18 ENSMUSG00000032419 ENSMUST00000034991 2 1 1 81 9 87602686 87608340 AGGAACAGAATGGGTTTGG 59 87602623 87602643 TATCTTCAAAGGTGAGAGTCC 58 NA Mus musculus 50 1700102P08Rik ENSMUSG00000032611 ENSMUST00000035234 1 1 1 115 9 108297702 108299527 TGCTAGACATGATTGACCA 58 108299606 108299624 CTTGAAGGGTGAATCTTGG 58 NA Mus musculus 50 Gpr19 ENSMUSG00000032641 ENSMUST00000066107 3 1 4 129 6 134827334 134837649 AGAGGAGGTGATATTCATGTG 58 134820491 134827243 CCACTTAGTTCTGAAAGCC 58 NA InUTR Mus musculus 50 Lmo2 ENSMUSG00000032698 ENSMUST00000111143,ENSMUST00000111140,ENSMUST00000040619 1 3 4 112 2 103816331 103816349 CTCTACTACAAGCTGGGAC 58 103821079 103821097 ATCGTCATCTCATAGGCAC 58 NA DesignNoJunction Mus musculus 50 Loxhd1 ENSMUSG00000032818 ENSMUST00000035501 2 1 1 65 18 77620373 77620732 ATAACAACGCCACTATGAC 57 77620761 77620779 GCTAATGCATGAAGATCGA 57 NA DesignRelaxed Mus musculus 50 Acsm1 ENSMUSG00000033533 ENSMUST00000047929,ENSMUST00000098083 1 2 2 80 7 126799528 126799548 CAACACTGAAGGATACATTGG 58 126799588 126801824 TCTGGGCTATTCTCATATTCC 58 NA Mus musculus 50 Zdhhc5 ENSMUSG00000034075 ENSMUST00000035840,ENSMUST00000111645 2 2 2 81 2 84532537 84532555 TCAGATGGGCAGATAACTG 58 84532151 84532496 CTAGGCTTCCTTTAGACTTAGTC 59 NA Mus musculus 50 Atm ENSMUSG00000034218 ENSMUST00000037440 1 1 1 80 9 53294204 53294932 GAGAGCGTCTCAAGATAACC 59 53294143 53294162 ACTGCCATCTTGGATAACTG 59 NA Mus musculus 50 Diap2 ENSMUSG00000034480 ENSMUST00000113320,ENSMUST00000037854,ENSMUST00000096329,ENSMUST00000031135 1 4 4 96 X 126824518 126862512 AAACAAAGAGGGTGATGAG 57 126862572 126862590 TCTTGGAATTCGCTTTCTG 58 NA Mus musculus 50 Daam1 ENSMUSG00000034574 ENSMUST00000085299,ENSMUST00000095639,ENSMUST00000045448 2 3 3 80 12 73043247 73045051 CCCATGAGGTTTGTAACCA 59 73045093 73045113 CTCATAGTCCATGGTCTTCAG 59 NA Mus musculus 50 Rnf185 ENSMUSG00000034587 ENSMUST00000044742 2 1 1 195 11 3371433 3371451 CACCAATGGTGATCAAAGC 59 3379283 3379301 GACTATGGATGTTGGGACC 59 NA DesignNoJunction, InUTR Mus musculus 50 Gpatch8 ENSMUSG00000034621 ENSMUST00000069673,ENSMUST00000047539 2 2 2 89 11 102343397 102348827 AAACAAGCTGAATGTGCAC 59 102343326 102343346 ATCTTTATCCTCTTCTCCACC 58 NA Mus musculus 50 Ttc22 ENSMUSG00000034919 ENSMUST00000047922 2 1 1 118 4 106306816 106307023 ACACTCTTTATCAGGCTGG 58 106307105 106307123 GAGTCTGAGGACTTGAGGA 59 NA Mus musculus 50 Slc24a5 ENSMUSG00000035183 ENSMUST00000070353 1 1 1 80 2 124906562 124906580 AGCACCATACTAGGATCTG 57 124906624 124906971 TGTTGAAACCATGTTGGAC 58 NA Mus musculus 50 Tk2 ENSMUSG00000035824 ENSMUST00000050211 3 1 1 82 8 106755138 106760681 TGTATAGAAGTGGGAAGATGC 59 106755076 106755094 GACATCAATGTTCCTGACG 58 NA Mus musculus 50 Lysmd3 ENSMUSG00000035840 ENSMUST00000049055 3 1 1 154 13 81804125 81804143 GAAGTCTACGAACTTCGGT 59 81804261 81808170 ATATCTGCTACCGTACAGC 58 NA Mus musculus 50 C630028N24Rik ENSMUSG00000035878 ENSMUST00000039742 3 1 1 80 9 54768623 54770013 TATCCATTGACAGTGGATCTG 59 54770055 54770073 CCTCAGCTATTGGTCTTCC 59 NA Mus musculus 50 Rab3gap1 ENSMUSG00000036104 ENSMUST00000037649 2 1 1 80 1 129787664 129798164 TGGTAAGATGGTATGGCCT 59 129798206 129798226 ACTTGGATTCACTGAGAACTG 59 NA Mus musculus 50 Sh3bp4 ENSMUSG00000036206 ENSMUST00000066279 1 1 1 70 1 91048919 91048937 TATGAGTCTCCTCACCGAG 59 91049709 91049727 AAGTCATAGGCAGGTTTCC 59 NA DesignNoJunction Mus musculus 50 Pnpla8 ENSMUSG00000036257 ENSMUST00000043082 3 1 1 84 12 45409033 45409052 ATACCTCAACATACACGAGC 59 45409096 45412327 AGCATGATATGAACTTCCTCTG 59 NA Mus musculus 50 9030025P20Rik ENSMUSG00000036552 ENSMUST00000080150 3 1 5 106 17 15184613 15186434 GATATTCCTCCAAAGTGTGAC 58 15186502 15186520 CTGCCATTTCCCAATATGG 58 NA Nonspecific Mus musculus 50 Rbm42 ENSMUSG00000036733 ENSMUST00000042726,ENSMUST00000108143 3 2 2 88 7 31426228 31426335 AGATGAATGGGAAGTATGTGG 59 31426160 31426178 CTTCTTACGGACCACATCC 59 NA Nonspecific Mus musculus 50 Hhat ENSMUSG00000037375 ENSMUST00000044190,ENSMUST00000097435,ENSMUST00000085565 2 3 4 91 1 194552539 194553488 AGGAAGTTAAGAGAAGGTGG 58 194552467 194552485 GAAGCTGGTGTAGTACAGG 59 NA Mus musculus 50 D14Ertd436e ENSMUSG00000037526 ENSMUST00000042988 3 1 1 89 14 48168651 48168670 GATTAGCCTACCAAACAACG 58 48167021 48168599 TTATGCTCCATGTCAGGTC 59 NA Mus musculus 50 Shank2 ENSMUSG00000037541 ENSMUST00000105900,ENSMUST00000084391,ENSMUST00000097929 1 3 3 172 7 151584158 151591244 AGAAGAAGGATAAACCGGA 57 151593040 151593058 CATTACAGCAATCCCTTGG 58 NA Mus musculus 50 1700090G07Rik ENSMUSG00000037689 ENSMUST00000042172 2 1 1 134 17 87317803 87317821 CATGGAGTTTGAACTGACG 58 87317919 87321536 CTTCCTGAGAACTGGTGAG 59 NA Nonspecific Mus musculus 50 Arpm1 ENSMUSG00000037737 ENSMUST00000047630 1 1 1 62 3 30497662 30498586 ATCCATCAGCTATCCAGTG 58 30497618 30497636 CACATGATCTCCATGTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 AW551984 ENSMUSG00000038112 ENSMUST00000042485,ENSMUST00000086047 3 2 2 82 9 39398238 39398259 GGGATATGAATGAGGATTTAGC 58 39397346 39398195 TTCTAACACCTCAGTAGGG 57 NA Mus musculus 50 C030046E11Rik ENSMUSG00000038658 ENSMUST00000043610 3 1 2 116 19 29607742 29607761 AGTACCATGATAGCAGTGTC 58 29615822 29636490 CATTTGTGGACTTCCTTTGG 59 NA Mus musculus 50 Akap2 ENSMUSG00000038729 ENSMUST00000102903 1 1 14 177 4 57869767 57869785 GATCGAAGAAGAGATCCGG 59 57905757 57905775 CTCTTCCTCCGATTAACCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Rccd1 ENSMUSG00000038930 ENSMUST00000047362 3 1 1 193 7 87465044 87465062 CTAGAGCCAAGACTGTTGG 59 87463900 87464137 TTCAATTCTGTGGCTTCCT 59 NA Mus musculus 50 Camk1d ENSMUSG00000039145 ENSMUST00000044009,ENSMUST00000114987 1 2 3 109 2 5366183 5486707 CCGTGCTTAGAAAGATTAAGC 59 5283152 5283170 GAAGAGTTCTCCACCAGAC 59 NA Mus musculus 50 Dap ENSMUSG00000039168 ENSMUST00000044524 3 1 1 65 15 31165594 31165613 ACAAGGATGACCAAGAATGG 59 31202160 31202178 TAACGCCAGAGATGAACAC 59 NA DesignNoJunction Mus musculus 50 B3galnt2 ENSMUSG00000039242 ENSMUST00000099747 1 1 1 80 13 14083121 14083640 CTACACTGTTCAGGAAGGT 58 14083683 14083702 AGATCCTGTATGTGATCTGC 58 NA Mus musculus 50 Heatr5b ENSMUSG00000039414 ENSMUST00000097281 1 1 1 80 17 79194678 79195173 CAGCTTCTAGTGATATGAGTG 57 79194618 79194639 CATCCATCTCATCTTTCTTCTC 58 NA Mus musculus 50 Foxp3 ENSMUSG00000039521 ENSMUST00000115740,ENSMUST00000115739,ENSMUST00000115738,ENSMUST00000045566 3 4 4 133 X 7168645 7169295 CTTCCCAGAGTTCTTCCAC 59 7169803 7169824 GGTAGATTTCATTGAGTGTCCT 59 NA Mus musculus 50 Cylc2 ENSMUSG00000039555 ENSMUST00000041392 1 1 1 136 4 51241308 51241326 CTTCAGATTCTGAAGGCGA 59 51241426 51242173 TTTAGTGGTCTTGGCTTCC 59 NA Mus musculus 50 Kcne2 ENSMUSG00000039672 ENSMUST00000047383,ENSMUST00000113971 1 2 2 64 16 92297080 92297098 GTACCACCAGTACATCGTG 59 92297126 92297144 CTTCCAGATGCAGGATCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc39a5 ENSMUSG00000039878 ENSMUST00000042666 3 1 1 114 10 127835613 127836337 GAATGAGGATTGTCTGAATGG 58 127835519 127835537 AATCTGATAAAGCAGGGCT 58 NA Mus musculus 50 Clstn1 ENSMUSG00000039953 ENSMUST00000084120,ENSMUST00000039144,ENSMUST00000105691 2 3 3 80 4 149017772 149017791 CCTACCTTAACTCAAGGCAG 59 149017834 149018094 CCTCGTTGAAACACTTGAC 58 NA Mus musculus 50 Tdrd6 ENSMUSG00000040140 ENSMUST00000045717 3 1 1 88 17 43757437 43757455 TTTCAAATGGTGTGGAGGA 59 43754174 43757385 GAATACAGCCTCAGAAGGT 58 NA Mus musculus 50 Tm7sf3 ENSMUSG00000040234 ENSMUST00000037709 3 1 2 81 6 146570513 146572100 CCTACTCAGAAAGAGATCCC 58 146570451 146570470 TAGTCCAAATAGAGGTTGGG 58 NA Mus musculus 50 Cdc2l5 ENSMUSG00000041297 ENSMUST00000042365 2 1 1 80 13 17831023 17842107 TATAGCTCAGAAGAAAGTCGC 59 17830963 17830982 TTCTCCCAAGAGCAATTCAG 59 NA Mus musculus 50 Wdr79 ENSMUSG00000041346 ENSMUST00000048139 3 1 1 83 11 69377101 69377119 AGAACCCGATTCACATCTG 59 69376926 69377054 CTGTCAACTCATCCAGGTG 59 NA Mus musculus 50 Cacna2d4 ENSMUSG00000041460 ENSMUST00000037434 2 1 1 80 6 119220781 119220799 TACGTCCACTACATTGAGC 59 119220842 119221248 CAACTGCTTGAAATGCTCTC 59 NA Mus musculus 50 Tram2 ENSMUSG00000041779 ENSMUST00000037998 1 1 1 80 1 20996311 20996947 CATGTGTACCTCTCCTTCC 59 20996249 20996269 GTAGAGTTCAGGTAGTGAGTG 59 NA Mus musculus 50 Nfrkb ENSMUSG00000042185 ENSMUST00000086167 2 1 1 80 9 31216916 31216935 TGAAATATGACATCGGTCGG 59 31216975 31217444 CTTGATGAATCCGTTCAAACTC 59 NA Mus musculus 50 Hsd3b7 ENSMUSG00000042289 ENSMUST00000046863,ENSMUST00000106272,ENSMUST00000106271 2 3 3 80 7 134945108 134945126 CATCCACAAAGTCAACGTG 59 134945387 134945405 GTGTAGACCAGGTACTGAG 58 NA DesignNoJunction Mus musculus 50 Dlgap3 ENSMUSG00000042388 ENSMUST00000046659,ENSMUST00000106094,ENSMUST00000106092 1 3 3 96 4 126892160 126892178 ATCATCAAGACCATCCCTG 58 126892238 126892557 CTGAGATTGTCTCCACCTG 59 NA Mus musculus 50 Crtac1 ENSMUSG00000042401 ENSMUST00000048630 2 1 1 83 19 42362352 42362370 CAAACTTCAGAACACAGCC 59 42358744 42361668 CATTCATTGGTGTCCATGC 59 NA Mus musculus 50 Wdr74 ENSMUSG00000042729 ENSMUST00000049424 1 1 1 82 19 8812678 8812696 TTGGGACCAAGATACACAG 58 8812742 8813771 GATCATAGACACGGACCTG 59 NA Mus musculus 50 Dpy19l1 ENSMUSG00000043067 ENSMUST00000086251,ENSMUST00000034446,ENSMUST00000115277 1 3 3 80 9 24252279 24252297 ATTTGCCGTGTATGTTGTG 59 24245272 24252236 AGCACAAGAGAAATCATGTG 58 NA Mus musculus 50 Il17re ENSMUSG00000043088 ENSMUST00000058548,ENSMUST00000062146,ENSMUST00000113073,ENSMUST00000101065,ENSMUST00000053569 1 5 5 108 6 113413984 113414002 ATGAATTCCTTCTGCCCTG 59 113414813 113415718 TCTGAGCCATAAGCTTCAG 59 NA Mus musculus 50 Olfr544 ENSMUSG00000043925 ENSMUST00000051201 3 1 1 60 7 109632974 109632992 ATATGCTCCTGTTAGGTGC 59 109632932 109632950 GATGAGATCCTGAAGGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Muc19 ENSMUSG00000044021 ENSMUST00000088547 2 1 1 80 15 91758456 91758474 ATTCCTGCTGTGAGATTGG 59 91758816 91760755 CAAAGGATGAACCAATCGC 59 NA Mus musculus 50 Olfr1442 ENSMUSG00000044441 ENSMUST00000057924 3 1 1 60 19 12749048 12749066 TATGATCGCTATGCAGCAG 59 12749090 12749108 CAGTTGGAGTCATGATGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC030476 ENSMUSG00000044726 ENSMUST00000060894 1 1 1 116 15 34401232 34401250 AAGTAACAGGTGGAAACAG 57 34401330 34402573 CTGTCTCACCTTCAATGTG 58 NA Mus musculus 50 Zfp367 ENSMUSG00000044934 ENSMUST00000059817 3 1 1 157 13 64245578 64246852 AAAGGACTCATACAGGTGAG 58 64243632 64243650 ATGGGTGAATCTGCTTAGG 59 NA Mus musculus 50 D19Ertd652e ENSMUSG00000044948 ENSMUST00000096002 2 1 1 80 19 47814210 47814228 GAGATGGAGGACCTAAACC 58 47813337 47814167 TTCGTTTAGGTACTTCTGCC 59 NA Mus musculus 50 Zfp629 ENSMUSG00000045639 ENSMUST00000084564,ENSMUST00000058038 2 2 2 111 7 134756264 134756282 CTGGAACCTTCACAGTCTG 59 134756067 134756189 CTTCCAGCACCTCTATGAG 59 NA DesignRelaxed, InUTR Mus musculus 50 Basp1 ENSMUSG00000045763 ENSMUST00000058845 1 1 1 262 15 25294145 25294163 GACTCTAAACCTAGCAGCG 59 25293901 25293920 GGACAGAGTGAGAAACAGAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Adamts6 ENSMUSG00000046169 ENSMUST00000043424,ENSMUST00000065766 3 2 2 80 13 105084838 105084856 ATTCTGAGCCTCATCATGG 59 105084899 105087255 AGTCAGGAATTCCTCTTGAG 58 NA Mus musculus 50 Tusc5 ENSMUSG00000046275 ENSMUST00000062024 2 1 1 88 11 76507784 76509732 CTGTCAATTTCACAGTTCCG 59 76509783 76509801 TAGGTTCGGAGATCTCCAG 59 NA InUTR Mus musculus 50 Mospd4 ENSMUSG00000046487 ENSMUST00000061488 3 1 1 60 18 46625060 46625078 GATTCGAAACTGAGGTGTG 58 46625018 46625036 AGCCATCTTCCAGTTTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Atp10d ENSMUSG00000046808 ENSMUST00000094710 2 1 1 81 5 72671394 72673347 TTCTACAAGAATGTGGCCT 58 72673390 72673410 AGTCTGTCATAGATGTTCCTG 58 NA Mus musculus 50 Slc26a1 ENSMUSG00000046959 ENSMUST00000051757 3 1 1 113 5 109102536 109102554 AACAACTCAGCTACAACAC 57 109101751 109102459 CATGAGGACCTGATAAAGC 57 NA Mus musculus 50 D330028D13Rik ENSMUSG00000047115 ENSMUST00000060561 3 1 1 81 6 49333071 49335384 TAATGAAGTAGGTCCAAGCAC 59 49335424 49335445 GTACTGTCTTTCAAAGTATGCC 59 NA Mus musculus 50 Ticam1 ENSMUSG00000047123 ENSMUST00000058136 2 1 1 60 17 56410593 56410612 CAGAGTTGTCTACAAACTCC 57 56410552 56410570 TGCTTTCCAACACTTTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Smgc ENSMUSG00000047295 ENSMUST00000072327,ENSMUST00000100293,ENSMUST00000088555,ENSMUST00000051539 3 4 6 143 15 91672444 91672462 GTCTGTTAGGTTACCTGGG 58 91672938 91674793 CACTTGAGTCACCTGACAG 59 NA Mus musculus 50 A430005L14Rik ENSMUSG00000047613 ENSMUST00000058393 2 1 1 190 4 153331428 153333872 GAAGCTTACAGGTGGAGTG 59 153334694 153334712 TCACAAGGTGACCTTTGTC 59 NA DesignNoJunction Mus musculus 50 Fbxo30 ENSMUSG00000047648 ENSMUST00000070300 2 1 1 83 10 11011300 11011319 GAATGGTAATCTTGCAGTGG 58 11011365 11015027 TGAATCGCCATACCTTCTC 59 NA Mus musculus 50 E130114P18Rik ENSMUSG00000048747 ENSMUST00000107067,ENSMUST00000107068 3 2 3 151 4 97241604 97251248 GACACAGGAGGTGATTGAC 59 97235931 97235950 TCTCTATCTTGGCATCTTGC 59 NA DesignNoJunction Mus musculus 50 Ccr2 ENSMUSG00000049103 ENSMUST00000055918 3 1 1 60 9 124021349 124021367 CACACTGCTGCATTAATCC 59 124021390 124021409 AGATACCTTCGGAACTTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem200a ENSMUSG00000049420 ENSMUST00000066049 2 1 1 60 10 25713989 25714009 GACTTTATTCTCCATCTGGCT 59 25713949 25713968 ATTCCTATGATGGACACCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp260 ENSMUSG00000049421 ENSMUST00000050735,ENSMUST00000108200 3 2 2 62 7 30884720 30884738 GAGAAGCAGCATCAATCTG 58 30889271 30889292 TTTCATCCTGTGTCCTTATCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Lrrc4 ENSMUSG00000049939 ENSMUST00000062304 3 1 1 60 6 28779707 28779725 CACCACTATCTCTGAACCT 57 28779665 28779683 AGTTTCCTGTACCTTGTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr371 ENSMUSG00000051952 ENSMUST00000070849 3 1 1 60 8 87754789 87754808 TATACAGTGCTCATGAACCC 59 87754831 87754849 TTATAAGCCATGCCAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nfib ENSMUSG00000052757 ENSMUST00000064785 3 1 1 98 4 81938475 81938494 GTTTAGAGACTGGACTCGAG 59 81938396 81938417 CAAGAACCTGTGAAATATCTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 9230110C19Rik ENSMUSG00000053070 ENSMUST00000115670 3 1 3 232 9 8042717 8042735 ATTCCTGCCTCATAGAACC 58 8022536 8037469 AACAGAGTCCTAATGTGGT 57 NA DesignRelaxed Mus musculus 50 2700023E23Rik ENSMUSG00000053656 ENSMUST00000066220 3 1 1 80 5 74489662 74489680 CTGGAGTCACAAATGAACC 58 74489724 74489742 ATCACTACCTAGCAATCGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000053821 ENSMUSG00000053821 ENSMUST00000066461 2 1 1 129 14 102128995 102129013 TGGTCAGAATTATCTGGGC 59 102128884 102128903 CTATTCCTGGTATGTCAGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG380907 ENSMUSG00000053868 ENSMUST00000066558 3 1 1 60 14 59797249 59797268 CCTTCACATTTGTCTACCCT 59 59797208 59797226 GGTATCTATCCATCGGTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ech1 ENSMUSG00000053898 ENSMUST00000066264 2 1 1 80 7 29611229 29611248 ATATCCAAAGACTCGGACTG 58 29611290 29614835 GTCCATGAGGTCAATACCTG 59 NA Mus musculus 50 Taf4b ENSMUSG00000054321 ENSMUST00000067347 1 1 1 80 18 15017723 15017741 AATCTCACAGCTCTTGCAG 59 15017783 15056490 AGGGTTATCTTTGAAGCTCTC 59 NA Mus musculus 50 9130230L23Rik ENSMUSG00000054598 ENSMUST00000067737 3 1 1 82 5 66379762 66381085 CAATTACAGGACTCTCAGGG 59 66379699 66379717 CTGATAAGAAGCCGAAGCT 59 NA Mus musculus 50 Sgol2 ENSMUSG00000054770 ENSMUST00000114410,ENSMUST00000068000 2 2 2 69 1 58020087 58022173 GGCTTTAACAGACTTCTGTG 58 58020037 58020056 ATAGTGGAGAACCCAAACTG 59 NA DesignNoJunction Mus musculus 50 AV320801 ENSMUSG00000054994 ENSMUST00000068340 3 1 1 80 X 132035926 132035944 TATGAACCACCTGAAGGAG 58 132035987 132036583 GCAGATAGTACTCTCAGGAC 58 NA Nonspecific Mus musculus 50 A830031A19Rik ENSMUSG00000055010 ENSMUST00000068360 3 1 1 225 11 23949547 23958783 ACTCTTCATCCTAGCAGGA 59 23949340 23949358 ATCAACATTCTCGTGGTCC 59 NA DesignRelaxed Mus musculus 50 Sertad3 ENSMUSG00000055200 ENSMUST00000068641 1 1 1 60 7 28261420 28261443 GAAGAAGATTTCTCCCTATCTACC 59 28261462 28261480 TGGATGTATCTAGCTCCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 NM_001101433.1 ENSMUSG00000055538 ENSMUST00000069180 3 1 1 87 14 26588112 26588131 ATCTTAACAGCGTCTTCCAG 59 26576645 26576663 TTATTGAGGGAACCGTAGG 58 NA DesignNoJunction Mus musculus 50 Apobec4 ENSMUSG00000055547 ENSMUST00000068875 3 1 1 60 1 154604008 154604026 TGGCTGACAGGTATAACAC 58 154604050 154604068 GTGAAGTAAGGCTTTGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 9330182L06Rik ENSMUSG00000056004 ENSMUST00000115343,ENSMUST00000115348,ENSMUST00000069538 1 3 3 80 5 9399369 9410595 TGTAACAACTCTTCTTGGCT 59 9410637 9410656 AGCGTAGATCAAAGACACAG 59 NA Mus musculus 50 OTTMUSG00000003456 ENSMUSG00000056687 ENSMUST00000070956 3 1 1 200 11 109224547 109224565 ATCACGTTGCTGTAGATGG 59 109218253 109218271 GATAAGCTGAGGTTTCAGC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Setd3 ENSMUSG00000056770 ENSMUST00000071095,ENSMUST00000099383 3 2 4 296 12 109396052 109396070 AAGAAGAGGAAGTACGCTG 59 109351588 109356455 TATAGCCAGTTGTGATCAGG 58 NA DesignRelaxed Mus musculus 50 Myh4 ENSMUSG00000057003 ENSMUST00000018632 1 1 1 80 11 67055656 67055767 GTCCATCCTGATTACTGGAG 59 67055809 67055828 GCAATTGTTGCAAAGTACTG 58 NA Mus musculus 50 Skap1 ENSMUSG00000057058 ENSMUST00000100521,ENSMUST00000103154,ENSMUST00000071510 2 3 7 145 11 96351235 96387367 AAATCCAGGTACTGTTGGG 59 96402792 96563932 TCTTCTATTCCCTCGTCCT 58 NA Mus musculus 50 Gja5 ENSMUSG00000057123 ENSMUST00000107063 2 1 3 145 3 96841682 96841700 ACTCTGAGCTCTAAACGTG 59 96854626 96854644 AATGAACAGGACAGTGAGC 59 NA DesignNoJunction, InUTR Mus musculus 50 1700042B14Rik ENSMUSG00000057402 ENSMUST00000112556 3 1 2 157 X 151560394 151569611 TTCATTCTCACCAAGTTCTC 57 151560256 151560274 GATCTTCATAGTGCCACAC 57 NA InUTR Mus musculus 50 Zfp329 ENSMUSG00000057894 ENSMUST00000072222 1 1 1 60 7 13395530 13395549 TGTCTGAAGTGTGGAAAGTC 59 13395489 13395509 GAAGTCTCTGATGTACTACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 1700008I05Rik ENSMUSG00000058252 ENSMUST00000078605 1 1 1 80 X 132193584 132193602 GTGCTATACCAAGGGTACC 59 132193426 132193542 TTTATCCATCAGCAGAGTCTC 59 NA Mus musculus 50 5830415L20Rik ENSMUSG00000058503 ENSMUST00000095034 3 1 1 80 5 3564304 3564322 CTGTCAGAGTCAGACTGTG 59 3565741 3568995 GGCTTTGTCTGTTGTTCTC 58 NA Nonspecific Mus musculus 50 Zfp708 ENSMUSG00000058883 ENSMUST00000109743,ENSMUST00000091527 2 2 3 186 13 67175889 67198740 GAAATGACCAAGGACCCTC 59 67172417 67172437 TCCTATCAAAGGATTTCCCAC 59 NA DesignNoJunction Mus musculus 50 Sh2d3c ENSMUSG00000059013 ENSMUST00000074248,ENSMUST00000113242,ENSMUST00000113240 2 3 3 108 2 32600305 32600323 CAGAGAAACTGCACAAGGA 59 32600395 32601368 AGAGTCTCAGAGACCTCAC 59 NA Mus musculus 50 NM_146333.1 ENSMUSG00000059259 ENSMUST00000071176 3 1 1 61 2 90241661 90241680 ACCCTATCATCTACTCCCTG 59 90241702 90241722 GGTCCATAGAATCTTAATGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sclt1 ENSMUSG00000059834 ENSMUST00000026866 2 1 1 80 3 41486254 41486272 GTTGCAGTATCGAAAGTGG 58 41485698 41486213 AATATCTTCCTCCTTCTTCAGC 59 NA Mus musculus 50 Ptp4a3 ENSMUSG00000059895 ENSMUST00000053232 3 1 1 205 15 73582268 73582286 GATCTCACTGGACTTGGTG 59 73582455 73584201 CGTACTTCTTCAGGTCCTC 59 NA DesignRelaxed, InUTR Mus musculus 50 D10627 ENSMUSG00000059897 ENSMUST00000078275 1 1 2 113 8 71752226 71752499 CAACATAGTAGTCTCCAAATGC 59 71752572 71752591 TCTCTTATGCTTTCGAAGAC 57 NA DesignNoJunction Mus musculus 50 Hnt ENSMUSG00000059974 ENSMUST00000075069,ENSMUST00000115237 1 2 2 92 9 28804214 28816823 ATCATGCTATTTGGTCCCG 59 28804140 28804158 TAAGACCAGAAGAGGGAGG 59 NA Nonspecific Mus musculus 50 Olfr1337 ENSMUSG00000061075 ENSMUST00000077247 3 1 1 60 4 118454766 118454786 TATACTGTCATCCTCAACTGG 58 118454726 118454744 CACATATCCAAGACCCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr153 ENSMUSG00000061520 ENSMUST00000077471 3 1 1 60 2 87372493 87372511 TCATTTCCTGTACCTTTGC 57 87372535 87372553 CTATCAAAGGCCATGACTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1457 ENSMUSG00000061637 ENSMUST00000075170 1 1 1 60 19 13169594 13169613 TTCATCATTTCTTCTGCGAC 58 13169553 13169573 AAGTATCTGTCTGAGCAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Med9 ENSMUSG00000061650 ENSMUST00000081980 2 1 1 191 11 59761975 59774073 CAAATGCATGGACAAGGAC 59 59774228 59774246 CTCTTGTACTTCTGCAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem65 ENSMUSG00000062373 ENSMUST00000110159,ENSMUST00000072113 2 2 2 141 15 58654465 58654483 CGACTTCATCTACAGCCTG 59 58625954 58628766 GTGGAAGAATACATATCTCAGC 58 NA DesignRelaxed Mus musculus 50 NP_001098671.1 ENSMUSG00000062432 ENSMUST00000073391 2 1 1 157 19 37763331 37763349 CAGGGACCAGTTGTATGAG 59 37763470 37765212 CTACAGCCAACTCCTTCAG 59 NA Mus musculus 50 4930512M02Rik ENSMUSG00000062511 ENSMUST00000081896 2 1 1 83 11 11490119 11524661 TATGATGGGAGTCAGATGGA 59 11490055 11490073 CTCATGTGGATGATTGGCT 59 NA Mus musculus 50 Cyp26b1 ENSMUSG00000063415 ENSMUST00000077705 3 1 1 88 6 84525059 84525078 CATCAAGGAGGTCATGAGAC 59 84524641 84525008 GGATCTGGAAACCATCCAG 59 NA Mus musculus 50 Tas2r114 ENSMUSG00000063478 ENSMUST00000080619 2 1 1 60 6 131640048 131640066 GAAGGTGTCCTCCTTTCAG 59 131640006 131640024 ATGTGTTCCCTACAATGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2010109I03Rik ENSMUSG00000063522 ENSMUST00000077004 2 1 1 80 15 74710459 74711119 TGACCAACTGGTATACACC 58 74710397 74710416 CATGATTAATGTCAGGGCAG 58 NA Mus musculus 50 Rhox2 ENSMUSG00000063709 ENSMUST00000072167 1 1 1 61 X 34945586 34945604 AACTACAAGAGCTGGAGAG 58 34945629 34953800 ATTTGCCTCCTTAGTGCTG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 EG216818 ENSMUSG00000063789 ENSMUST00000081940 1 1 1 94 8 73032419 73033204 ATCCAGAAAGAGTCCACCT 59 73032343 73032361 TCACAGTTGTACTTCTGGG 58 NA Nonspecific Mus musculus 50 Olfr96 ENSMUSG00000064121 ENSMUST00000078209 3 1 1 60 17 37362837 37362858 CTCATGGTATTGTACATTGTGC 59 37362879 37362897 CAATGACCTTGGAGAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-let-7c-1 ENSMUSG00000065557 ENSMUST00000083623 3 1 1 64 16 77599917 77599936 TGAGGTAGTAGGTTGTATGG 57 77599962 77599981 AAAGCTAGAAGGTTGTACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Slc31a1 ENSMUSG00000066150 ENSMUST00000084526 2 1 1 104 4 62047186 62048907 ATACACCTGGAGAAATGGC 59 62048975 62048993 CTTGAGACTTTCGAAGCAG 58 NA Mus musculus 50 Slc31a2 ENSMUSG00000066152 ENSMUST00000107468,ENSMUST00000107469,ENSMUST00000084530,ENSMUST00000107467 1 4 4 67 4 61957086 61957104 CTTCAGACAATAGGACCCG 59 61958033 61958051 AATGACATGGACTAGGGAC 58 NA DesignNoJunction Mus musculus 50 Spag8 ENSMUSG00000066196 ENSMUST00000084646,ENSMUST00000107870 1 2 2 85 4 43665229 43665247 CTCCCAAGACACATCTGTC 59 43664906 43664999 ACCTCTTTACAGATCTGGTG 58 NA Mus musculus 50 Ccl27 ENSMUSG00000066202 ENSMUST00000107988 2 1 3 127 4 42664589 42664818 GAGGAGGATATCTACTGGG 57 42665023 42665041 GACAAACAGCTCATTAGGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 EG629678 ENSMUSG00000067973 ENSMUST00000088880 2 1 1 80 14 77880977 77880996 ACCATTTGAAGTTCTGTACC 57 77879963 77880936 CTTTGATCCTTACCTTCAACC 58 NA Mus musculus 50 Il3ra ENSMUSG00000068758 ENSMUST00000090591 3 1 2 83 14 15183473 15183574 GAATACAATGTCTCCATCCC 57 15183620 15183638 GTAAACCTCTGACCTCGAC 59 NA DesignRelaxed Mus musculus 50 OTTMUSG00000003605 ENSMUSG00000069609 ENSMUST00000092460,ENSMUST00000100240,ENSMUST00000100239 1 3 4 60 11 114896470 114896490 GAATTACGAAAGCTGGAACTG 59 114894914 114896449 ATTTCTGGGTCAATGTTCAC 58 NA Nonspecific, DesignNoJunction Mus musculus 50 2610019A05Rik ENSMUSG00000069631 ENSMUST00000106867 1 1 5 63 11 106048394 106048412 GAGTGTTCCCAGTCTTCTG 59 106048349 106048368 TGTAATACCAACCCAAACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Taar8c ENSMUSG00000069701 ENSMUST00000092654 2 1 1 60 10 23821175 23821196 GGGATTGAAAGCTTAGTAAGTG 59 23821136 23821155 GATTGACAACAACTTGGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rbm44 ENSMUSG00000070732 ENSMUST00000094698 3 1 1 80 1 93065354 93065372 AACCTTCGTAGTTTCACCA 58 93065413 93065552 AGCCTCTATAATGTGATCTCTG 58 NA Mus musculus 50 Rasgrp3 ENSMUSG00000071042 ENSMUST00000095204 2 1 1 80 17 75899561 75899986 AATGTAGCCCAGAAACTCC 59 75900030 75900048 AATGGAGCTGTGACTAAGG 58 NA Mus musculus 50 Treml2 ENSMUSG00000071068 ENSMUST00000095248 1 1 1 82 17 48448481 48448499 TTGACATTTCTTCCAGCAC 58 48448545 48448744 CCCAAGTTGTATCTTCCCA 58 NA Mus musculus 50 Ptgdr ENSMUSG00000071489 ENSMUST00000095959 2 1 1 70 14 45473124 45478098 CCTGCCTTTAATTTATCGTGC 59 45473074 45473092 CTTCTGAGTCTCCTTCAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Eef1g ENSMUSG00000071644 ENSMUST00000052248 3 1 1 80 19 9044466 9047007 CTCTATAAACAGGTCTTAGAGCC 59 9047046 9047065 CTGGTTAATGCAGGTAAGGA 59 NA Nonspecific Mus musculus 50 Tuba1a ENSMUSG00000072235 ENSMUST00000097014 2 1 1 81 15 98781954 98781972 TTCTTCAGTGAGACAGGAG 58 98781759 98781909 GAACTTCATCGATGACCGT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 EG546250 ENSMUSG00000072574 ENSMUST00000100643 1 1 1 128 14 44327686 44328389 AGGATTCCTACAGCTTCAC 58 44328481 44328499 CATAGGATGCTTCCTGGTC 59 NA Mus musculus 50 OTTMUSG00000018988 ENSMUSG00000072922 ENSMUST00000101180 2 1 1 60 X 146239652 146252674 CCAGAAATTGACAGATCGT 57 146252695 146252716 GTTCCTGTACCCATAAATAGTC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Adam4 ENSMUSG00000072972 ENSMUST00000085319 1 1 1 60 12 82522054 82522073 AGTGGATTGATTGTGTATGC 58 82522013 82522031 CAGTATGCAGGTTCTTCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 P14576-2 ENSMUSG00000073079 ENSMUST00000110703 1 1 1 69 12 56340371 56341247 CCACCATTATCAATGAAGAGG 58 56341278 56341296 TCTGCTTCCAATAATGCTG 57 NA Nonspecific, DesignNoJunction Mus musculus 50 ENSMUSG00000073257 ENSMUSG00000073257 ENSMUST00000101657 1 1 1 80 X 29152847 29152866 GTCCGAATGTAGTCAGAGTC 59 29152908 29153246 TCCATGTTCATCAAACCCTC 59 NA Nonspecific Mus musculus 50 Eme2 ENSMUSG00000073436 ENSMUST00000097372 2 1 1 226 17 25031615 25031633 CTCTGACATCCTGATGGAG 58 25030572 25031078 AAGGTGGATCTGTGATCTG 58 NA DesignRelaxed Mus musculus 50 Pramel4 ENSMUSG00000073724 ENSMUST00000105761,ENSMUST00000105760,ENSMUST00000105759,ENSMUST00000084191,ENSMUST00000091676,ENSMUST00000094520 1 6 6 61 4 143656989 143657010 GCATCTCTATGTGAATGATGTC 59 143657032 143657839 AACACCTGAGCATTAGGTC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 OTTMUSG00000008953 ENSMUSG00000073763 ENSMUST00000097904 3 1 1 121 4 121656775 121668722 GAGATCACTCTATTCGCGA 58 121656010 121656028 TCCAGGACTTCTTTCTCCA 59 NA DesignNoJunction Mus musculus 50 Olfr633 ENSMUSG00000073937 ENSMUST00000098188 3 1 1 60 7 111095919 111095937 TATCTTCTGGTACCACCGA 59 111095961 111095979 GAATCTGCCTGTTCTTAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 2210011C24Rik ENSMUSG00000074217 ENSMUST00000056686 3 1 1 66 8 86534360 86534378 GAGGTCTATGAAGGTTGGG 59 86534312 86534330 TAACCCTACCCTGGTTCTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 EG632778 ENSMUSG00000074261 ENSMUST00000098663 1 1 1 60 7 26400735 26400753 CAGGCCCTTATGTCTTCAG 59 26400693 26400712 AGATCCATAGAATCAGCTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 C230081A13Rik ENSMUSG00000074305 ENSMUST00000061552 3 1 1 113 9 56075643 56088976 AGCAACCTAGGACAATCTC 58 56075548 56075566 CAGTCCTTCTTGGTCTGTC 59 NA Mus musculus 50 Obox3 ENSMUSG00000074369 ENSMUST00000036575 1 1 1 265 7 16066102 16066597 AGGGAGATCAAGATCTGGT 59 16065855 16065873 CACATGTCCCTATCACAGG 59 NA DesignRelaxed Mus musculus 50 Fkhl18 ENSMUSG00000074676 ENSMUST00000099200 2 1 1 61 2 152758324 152758342 AACATGAGCTCAACAACCA 59 152758281 152758299 CACATCTCTTTGGGTCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm904 ENSMUSG00000074902 ENSMUST00000099519 1 1 1 60 13 50740100 50740629 AAAGGTTGTACAGATTCAGG 57 50740652 50740670 CATAGGTTGTGATGGTGTC 57 NA Nonspecific, DesignNoJunction Mus musculus 50 Chst14 ENSMUSG00000074916 ENSMUST00000110837,ENSMUST00000099546 3 2 2 64 2 118753402 118753420 CACTTGTGCAATGTTCCAC 59 118753444 118753466 GAGAAGTCCAGGATATACTTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1310 ENSMUSG00000074949 ENSMUST00000099602 3 1 1 60 2 111849225 111849245 ATATTCTACGTGGCAAGTCTG 59 111849185 111849204 GGTCTGAGGTTACAGTTAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Prdm11 ENSMUSG00000075028 ENSMUST00000111274,ENSMUST00000099700,ENSMUST00000111272,ENSMUST00000111273 1 4 4 83 2 92853525 92853544 AAGTTGAACCCAAGAAACTG 58 92853038 92853479 ACTCACAGAACCAGAAGTC 58 NA Mus musculus 50 Olfr1253-ps1 ENSMUSG00000075075 ENSMUST00000099765 2 1 1 63 2 89592639 89592657 TATTGTCATTCTCGTGGCA 58 89592594 89592612 ATAATGCAGTGGCTTACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1247 ENSMUSG00000075081 ENSMUST00000111532,ENSMUST00000111531 3 2 4 71 2 89450249 89450269 TCAGATGACTAAATGGGAGAG 58 89450198 89450216 AGTAGGATCCTGAGTGAGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Kbtbd10 ENSMUSG00000075307 ENSMUST00000100050 2 1 1 93 2 69516240 69516258 AAAGGCAAGATTGTGATCG 58 69516315 69517751 TCACTTCCCACTTATTGGT 58 NA Mus musculus 50 EG669998 ENSMUSG00000075404 ENSMUST00000100186 1 1 1 75 16 10490909 10490927 TTGGAAATCTTCTGGGAGG 58 10490968 10490986 GAACTAGGGACCTTGAGTG 58 NA DesignNoJunction Mus musculus 50 IGKV9-120 ENSMUSG00000076515 ENSMUST00000103316 3 1 1 114 6 68000019 68000158 CTCTTGTTTCCAGGTACCA 58 68000236 68000254 TACCAATGTCCTGACTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV1-99 ENSMUSG00000076525 ENSMUST00000103326 1 1 1 85 6 68491683 68492104 TATTGTTCACGAGTCCAGC 59 68492151 68492171 GGCTTGATCTCCAATATTGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV8-27 ENSMUSG00000076580 ENSMUST00000103381 1 1 1 279 6 70122102 70122222 GTATCTGGTACCTGTGGGA 59 70121841 70121859 CTTCAGCTTGTACACTGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S53 ENSMUSG00000076737 ENSMUST00000103546 3 1 1 119 12 117107279 117107376 TAACTACAGGTGTCCACTC 57 117107178 117107197 TAGTATGGTCAGTGAAGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV7-1 ENSMUSG00000076763 ENSMUST00000103572 1 1 1 69 14 53274829 53274847 TGGTACAGACAGCATTCTG 59 53274880 53274898 CCTTCTTGTCACCATTGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Wdfy3 ENSMUSG00000078188 ENSMUST00000104987 1 1 1 65 5 102263261 102263279 CTGAAGAGCTTTGCTTTGC 59 102263214 102263235 CCTTCTAAAGAAACAATCAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000010207 ENSMUSG00000078514 ENSMUST00000061572,ENSMUST00000105776 2 2 2 68 4 143145629 143146123 TTTCACCCAAGAAAGAGGA 58 143146155 143146173 AACATCCCAGAAGTGATGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 0610010B08Rik ENSMUSG00000078897 ENSMUST00000109046,ENSMUST00000109045,ENSMUST00000099013 3 3 3 80 2 175250576 175250595 ATCCTTCTCAGAAGAGTCTC 57 175250310 175250536 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 Mef2b ENSMUSG00000079033 ENSMUST00000072500,ENSMUST00000110143,ENSMUST00000110146,ENSMUST00000110141,ENSMUST00000110140 2 5 5 180 8 72688981 72688999 AGAAGGCTTATGAGCTGAG 58 72689143 72689439 CTCTTCAGTGTCTGAAGGA 58 NA Mus musculus 50 Lemd1 ENSMUSG00000079330 ENSMUST00000112357 2 1 1 81 1 134125603 134153281 TGACAGTGAAGGTATGCTG 59 134153326 134153344 TGTTGCATCGAGAGTAGTC 59 NA Mus musculus 50 ENSMUSG00000068790 ENSMUSG00000079373 ENSMUST00000112750,ENSMUST00000112749 2 2 2 62 14 5928111 5928129 TTGGTTCCATGCAGTACTC 59 5927392 5928085 CCTCCTTAATGCTGTAGGA 58 NA Nonspecific, DesignRelaxed Mus musculus 50 NP_001092776.1 ENSMUSG00000079532 ENSMUST00000114117 1 1 1 160 X 71986598 71986616 TAGAAATCGACACCTGGAG 58 71987050 71987244 TAGTCCATCTAACAGCCAG 58 NA Mus musculus 50 Hoxa3 ENSMUSG00000079560 ENSMUST00000114434,ENSMUST00000048882 3 2 2 127 6 52122763 52133720 AAACATCTTTGGAGGTTTGC 59 52122655 52122673 GTTTCACGATCGTGATCAC 58 NA InUTR Mus musculus 50 Smok4a ENSMUSG00000079711 ENSMUST00000115649 2 1 1 245 17 13720327 13720345 ATGAGAGTACAGAAGGCCA 59 13720554 13721002 ATCCTCTGGTGATCTTCTG 58 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 Scmh1 ENSMUSG00000000085 ENSMUST00000000087,ENSMUST00000064991,ENSMUST00000106301 2 3 4 81 4 120187807 120187826 ATTGACTGTGCTTATCACCA 59 120187870 120189499 CAAACACGGCTGAAATGAC 59 NA Mus musculus 50 Tpd52l2 ENSMUSG00000000827 ENSMUST00000000844 3 1 6 137 2 181237614 181237632 GAATGAGAAAGTGACGCAG 58 181242963 181246287 GAGTAGCTGCTCATGTCTC 59 NA Mus musculus 50 Pnck ENSMUSG00000002012 ENSMUST00000114473,ENSMUST00000114472,ENSMUST00000002087 1 3 3 80 X 70902622 70902641 AACTCTTCAGCCAGATTCTG 59 70902480 70902580 AGTCTTTGGCTGATTCTGAG 59 NA Mus musculus 50 Lmf1 ENSMUSG00000002279 ENSMUST00000063344,ENSMUST00000116641,ENSMUST00000115111 1 3 4 86 17 25782189 25782207 TCTTGTGCCTTTCTTCCTG 59 25782257 25791378 ATGATGAGGATCACCTGGA 59 NA Mus musculus 50 Use1 ENSMUSG00000002395 ENSMUST00000110054,ENSMUST00000019169 2 2 3 82 8 73891950 73891969 TGTACATTTGCAGTCTAGGG 59 73892452 73892757 CCTCACATTCTCCAGATGG 59 NA Mus musculus 50 Mrpl2 ENSMUSG00000002767 ENSMUST00000002844,ENSMUST00000113429,ENSMUST00000113430 1 3 3 115 17 46785317 46785428 GATCCTTGTAGGTCTGCAG 59 46785504 46785525 CCTATGTGATTAGAGTTCAGGA 58 NA Mus musculus 50 Map2k7 ENSMUSG00000002948 ENSMUST00000062686,ENSMUST00000110999,ENSMUST00000110998,ENSMUST00000052385,ENSMUST00000003027,ENSMUST00000110995,ENSMUST00000110994,ENSMUST00000110996 2 8 8 80 8 4244003 4244022 TGGATGTAGTACTCAAGAGC 58 4244065 4244241 TAAAGACGTCTGTGTTGGT 58 NA Mus musculus 50 Mical3 ENSMUSG00000003178 ENSMUST00000077159 1 1 2 98 6 120957441 120959024 ACATCGAGGATGAGTTCTC 58 120957361 120957379 GGTACAGAAGGCACATAGG 59 NA Mus musculus 50 D10Bwg1364e ENSMUSG00000003346 ENSMUST00000003436 3 1 2 198 10 80047056 80048359 GTACCAGGTATGGCATCAG 59 80046797 80046894 ACCTTCTCGATGTTAGGGA 59 NA Mus musculus 50 Cugbp1 ENSMUSG00000005506 ENSMUST00000005643,ENSMUST00000068747,ENSMUST00000111452,ENSMUST00000111455,ENSMUST00000111449 2 5 6 126 2 90844908 90844926 AGAACAGAAGAGAATGGCC 59 90845016 90846791 GAGCTGCAAATAAAGTGCT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Susd2 ENSMUSG00000006342 ENSMUST00000095541,ENSMUST00000077610 3 2 2 90 10 75103264 75103282 CCAACTACCCAACTTCCTG 59 75103011 75103210 ATAGTCAGTGAAGAAGCGG 59 NA Mus musculus 50 Med8 ENSMUSG00000006392 ENSMUST00000084319,ENSMUST00000073881,ENSMUST00000019229,ENSMUST00000106384 2 4 4 152 4 118084959 118084977 TCAAACTGAAGGACGAGTG 59 118085093 118085282 CTCTGGATCTGCTTCTGAG 59 NA DesignRelaxed Mus musculus 50 Cdc42 ENSMUSG00000006699 ENSMUST00000051477,ENSMUST00000030417 2 2 2 121 4 136891904 136891922 ACAAACAAATTCCCATCGG 58 136885024 136888324 TCATAATCCTCTTGCCCTG 58 NA Mus musculus 50 Tinf2 ENSMUSG00000007589 ENSMUST00000100536,ENSMUST00000007733 3 2 3 179 14 56298998 56299018 GCTCAAGACTTATCTAACCCT 58 56298755 56298857 ATTCACACTGTTCTCCTGC 59 NA Mus musculus 50 Rassf1 ENSMUSG00000010067 ENSMUST00000093786 3 1 2 93 9 107456563 107459789 GGATACGAACGTGGATGAG 59 107459846 107459864 GATCTGGCCATTGTAGTCC 59 NA Mus musculus 50 Cdh23 ENSMUSG00000012819 ENSMUST00000073242,ENSMUST00000105462 1 2 5 107 10 59845482 59845500 GTGATCACAGTCAAAGGCT 59 59842086 59845413 GATGTAGACCACAGTAGAGTC 59 NA Mus musculus 50 Pax5 ENSMUSG00000014030 ENSMUST00000107827,ENSMUST00000107826,ENSMUST00000014174,ENSMUST00000102932,ENSMUST00000107825 3 5 5 80 4 44692432 44695550 CACAGCATAGTGTCTACAG 57 44692370 44692388 ACTGATGGAGTATGAGGAG 57 NA Mus musculus 50 BC039210 ENSMUSG00000014444 ENSMUST00000064316 3 1 3 99 8 125019706 125019724 GATCAACCAGTCTTTGCTG 58 125019509 125019644 CAGGTGGTTCTGGATATAGC 59 NA Mus musculus 50 Adam28 ENSMUSG00000014725 ENSMUST00000111072,ENSMUST00000022642 3 2 3 80 14 69251213 69251234 GCATGATTCATGACTACTTGAG 59 69248826 69251174 TAGGCATATGGAACCTTAGTG 58 NA Mus musculus 50 Lrrk1 ENSMUSG00000015133 ENSMUST00000077207 3 1 3 92 7 73426570 73426588 CAGAGATGAGGGACTTCTC 58 73404909 73426515 ACTCTGTGTTTGTAAGAGCA 59 NA Mus musculus 50 Gnrh1 ENSMUSG00000015812 ENSMUST00000111095,ENSMUST00000015956 3 2 2 101 14 68365866 68365884 AAGGAGGTGGATCAAATGG 59 68365948 68367318 AATCAGACTTTCCAGAGCTC 59 NA Mus musculus 50 Cdc6 ENSMUSG00000017499 ENSMUST00000092706,ENSMUST00000093937 1 2 2 91 11 98775314 98776406 GATCGACTTAGTCAGGTGTC 59 98776460 98776478 ATGTCTCCTGAAACAGCAG 59 NA Mus musculus 50 Slc35c2 ENSMUSG00000017664 ENSMUST00000109300,ENSMUST00000109299,ENSMUST00000109298,ENSMUST00000017808 1 4 5 110 2 165108295 165108313 ACGGACTACCTCAGAAGAG 59 165106865 165107583 TTTGGTCATCGTGTACAGG 59 NA Mus musculus 50 Rhot1 ENSMUSG00000017686 ENSMUST00000077451,ENSMUST00000017831 3 2 4 85 11 80068294 80068312 TTCACTTGCAATACTGCTG 58 80068361 80069378 CTGTAATGATCCTCTGGGT 58 NA Mus musculus 50 Pscd3 ENSMUSG00000018001 ENSMUST00000018145,ENSMUST00000116456 1 2 2 208 5 144383427 144383445 GACCACTTCTCTTAGTCCC 58 144445339 144447351 ATTTCAGCCTCTCAATGTC 57 NA DesignRelaxed Mus musculus 50 Lhx1 ENSMUSG00000018698 ENSMUST00000018842,ENSMUST00000108082 3 2 3 148 11 84333901 84333919 AAGGATGAAACAGCTAAGC 57 84333416 84333789 ACTCACTCTGGTAATCTCC 57 NA Mus musculus 50 Ndel1 ENSMUSG00000018736 ENSMUST00000018880,ENSMUST00000101017,ENSMUST00000108672 2 3 3 80 11 68657469 68658840 GTATAAGCAAAGCTTCCAGG 58 68657408 68657427 TCCAACTCTGCTTCTAACTC 59 NA Mus musculus 50 Lsp1 ENSMUSG00000018819 ENSMUST00000105968,ENSMUST00000018963,ENSMUST00000038946 2 3 5 84 7 149674353 149674371 AGTCAAACCTGAGCTACAG 58 149674418 149674769 TGATGACGTATCAGATGCTC 59 NA Mus musculus 50 Zfyve27 ENSMUSG00000018820 ENSMUST00000018964 1 1 2 100 19 42258667 42260115 AGATGCAATTGAGGAGACC 59 42260343 42260361 TGAGGAATCCATTGTCCTG 58 NA Mus musculus 50 Akt3 ENSMUSG00000019699 ENSMUST00000019843,ENSMUST00000111159,ENSMUST00000111160 1 3 3 80 1 178973984 178980177 AAATAAACGCCTTGGTGGA 59 178973922 178973940 TCTTGCCAGTTTACTCCAG 59 NA Mus musculus 50 P4ha1 ENSMUSG00000019916 ENSMUST00000009789,ENSMUST00000105466 3 2 3 92 10 58811090 58811108 GATTACCTGAGCTATGCGG 59 58811162 58813165 CTGATGTTCAGGATCTAGCTC 59 NA Mus musculus 50 Sgk1 ENSMUSG00000019970 ENSMUST00000100036 3 1 3 166 10 21648201 21648219 CAACTTGAAGTACACTGGC 58 21648349 21689264 GTTCTTTCACTTCACACCC 58 NA Mus musculus 50 Epb4.1l2 ENSMUSG00000019978 ENSMUST00000053748,ENSMUST00000092645,ENSMUST00000092644,ENSMUST00000061084,ENSMUST00000068469,ENSMUST00000020151,ENSMUST00000053095,ENSMUST00000061367 3 8 8 82 10 25189012 25189030 GCTGTTCACTTTCAATGTG 57 25189075 25191241 GAAGGCACAAGAAGTATCTG 58 NA Mus musculus 50 Rab1 ENSMUSG00000020149 ENSMUST00000020358,ENSMUST00000074741 3 2 4 81 11 20123112 20123130 TTCGAACAATCACTTCCAG 57 20123175 20124380 TTGAAGGACTCCTGATCTG 58 NA Mus musculus 50 Madcam1 ENSMUSG00000020310 ENSMUST00000105382 2 1 2 136 10 79128488 79130985 GAAAGGAGATTCCAGCCTC 59 79131084 79131103 TGTACATGAGCTAGTGTCTG 58 NA Mus musculus 50 Rasgef1c ENSMUSG00000020374 ENSMUST00000093142,ENSMUST00000109172,ENSMUST00000063444 2 3 4 129 11 49770603 49770622 CAGAATCCACAGAAGGAGAG 59 49770714 49770878 AAGATGTAGGCTTTCTCGG 59 NA Mus musculus 50 Gabra6 ENSMUSG00000020428 ENSMUST00000109286 3 1 2 91 11 42131268 42133177 TGGAGATGGAGTATACAATGG 58 42131197 42131215 TAAGCTCAGAATCTCAGCA 57 NA Mus musculus 50 Allc ENSMUSG00000020636 ENSMUST00000110917,ENSMUST00000020965 1 2 2 80 12 29240244 29242217 GTACTTTAAAGGCAACTGTCC 59 29240184 29240204 CTGATCATGTCTTCCTCTTCC 59 NA Mus musculus 50 Cacna1g ENSMUSG00000020866 ENSMUST00000107790,ENSMUST00000107789,ENSMUST00000103166,ENSMUST00000107786,ENSMUST00000050636,ENSMUST00000021234 2 6 14 87 11 94285025 94287106 GAGAAGGAATCTAATGTTGGAC 58 94280259 94280277 AGAGTAGTAGGGTTTGCAC 58 NA Mus musculus 50 Gfap ENSMUSG00000020932 ENSMUST00000067444 3 1 2 122 11 102753234 102753252 CAGACTTTCTCCAACCTCC 59 102750027 102750759 CTTAATGACCTCACCATCCC 59 NA Mus musculus 50 Esr2 ENSMUSG00000021055 ENSMUST00000110421,ENSMUST00000101291,ENSMUST00000076634,ENSMUST00000110419 3 4 6 85 12 77224306 77234807 CCTCAACTCCAGTATGTACC 59 77224240 77224258 TCACTGCGTTCAATAGGTG 59 NA Mus musculus 50 Nin ENSMUSG00000021068 ENSMUST00000085314,ENSMUST00000021468 3 2 3 122 12 71141857 71143129 GAACTCCTGAGATATGAATCTG 57 71141756 71141775 AGAGCCATTTAATTCCTCCA 58 NA Mus musculus 50 Smoc1 ENSMUSG00000021136 ENSMUST00000110347,ENSMUST00000021564 1 2 2 80 12 82251683 82253666 TTCGATGGAGATGAAATCAC 57 82253708 82253727 GTTGGTGTTATTCAACTTGG 57 NA Mus musculus 50 Cideb ENSMUSG00000022219 ENSMUST00000001497,ENSMUST00000100533 3 2 2 152 14 56376803 56376821 CAGTATCCACTGTGAGCTC 59 56374099 56376688 TCTCCAGGACCTTATCTAGC 59 NA Mus musculus 50 Ctnnd2 ENSMUSG00000022240 ENSMUST00000110415,ENSMUST00000081728 1 2 3 186 15 30835492 30835510 CAAACCCTACCTCACACTG 59 30850537 30851624 GATATACACGGACCACTGTG 59 NA Mus musculus 50 Wnt7b ENSMUSG00000022382 ENSMUST00000023015,ENSMUST00000109424 2 2 2 111 15 85374367 85389347 AAGAACTCCGAGTAGGGAG 59 85374274 85374292 CCACAATTGCTCAGATTGC 59 NA Mus musculus 50 Scrib ENSMUSG00000022568 ENSMUST00000002603,ENSMUST00000109946 2 2 4 87 15 75878097 75878364 GTATGACATCCAGTCACCA 58 75877945 75877963 TTCTCCATCTTCTTCCTGG 58 NA Mus musculus 50 Lztr1 ENSMUSG00000022761 ENSMUST00000115681,ENSMUST00000023444 2 2 2 80 16 17524245 17524263 TGTGACATCACACTACTGC 59 17524306 17524410 CTCAAAGTAGCTAGAACGGG 59 NA Mus musculus 50 Jmjd2b ENSMUSG00000024201 ENSMUST00000025036 3 1 2 161 17 56539245 56539263 TACAGTGACAACCTGTACC 58 56539480 56540654 AAACTCTACCTGGTAGATGAG 58 NA Mus musculus 50 Clps ENSMUSG00000024225 ENSMUST00000025062 2 1 1 111 17 28695779 28695797 AGTGTAAGAGCAGATGCTG 59 28695366 28695385 TAGTAGATCCCATAGAGGGT 57 NA DesignNoJunction Mus musculus 50 Csf1r ENSMUSG00000024621 ENSMUST00000025523,ENSMUST00000115268 1 2 4 80 18 61283910 61283928 ACCTTCATTGACCCTACTC 58 61283971 61284141 TAGAGTCTTACCAAACTGCA 58 NA Mus musculus 50 Cd7 ENSMUSG00000025163 ENSMUST00000026159 1 1 1 75 11 120898994 120899012 CATGCTGAGGAAGATACAG 57 120898408 120898426 GTCTTCATACACTACGCAC 57 NA DesignNoJunction Mus musculus 50 Pias2 ENSMUSG00000025423 ENSMUST00000114777,ENSMUST00000080968 3 2 3 148 18 77383785 77383803 ACTTCAGTTGATCCTGCTG 59 77388833 77391367 ATAGGAGGACAGTACTGGG 59 NA Mus musculus 50 Usp33 ENSMUSG00000025437 ENSMUST00000026507 2 1 2 81 3 152036390 152036409 ATACAGAAGTGTCATCTCCG 58 152036453 152037592 TATAGACACCCTATCGCAC 57 NA Mus musculus 50 Dach2 ENSMUSG00000025592 ENSMUST00000113379,ENSMUST00000067219,ENSMUST00000113382 1 3 6 101 X 110928591 110928734 CAACATTCAGGGTCTACTG 57 110928798 110928817 TCTCTGAAGAGCTCTATTCG 58 NA Mus musculus 50 Klhl4 ENSMUSG00000025597 ENSMUST00000113371 1 1 3 107 X 111656688 111656708 GTATCATCTCTTGCCTGAGAG 59 111656777 111662977 TCAATTGTAGTGGTGCCTC 59 NA Mus musculus 50 Pfkfb4 ENSMUSG00000025648 ENSMUST00000026738 1 1 3 124 9 108919630 108927570 GAATTCAAAGGCGTCTGTG 59 108927658 108930044 TCTTCATAGGACTCACCCT 58 NA Mus musculus 50 Inpp4a ENSMUSG00000026113 ENSMUST00000027287 3 1 3 80 1 37423057 37423077 CCCTTATCAATCAGATGACCC 59 37423117 37423396 CCAGTAAGTACATTGTTCCCT 59 NA Mus musculus 50 4921533L14Rik ENSMUSG00000026153 ENSMUST00000027337 3 1 2 119 1 24033537 24033555 TACAGTGATGTTCCTCTGC 58 24031702 24033455 TGCACTGTTTCCATCTAGAC 59 NA Mus musculus 50 Copa ENSMUSG00000026553 ENSMUST00000027833 3 1 2 80 1 174042144 174042261 AGAAAGTATGATGAGGTACTCC 58 174042301 174042320 CTTCTTCTGGAGATAAGCGA 58 NA Mus musculus 50 Prkcq ENSMUSG00000026778 ENSMUST00000102970,ENSMUST00000028118 1 2 3 85 2 11201144 11205379 AATTGTCTACAGGGACCTG 58 11205428 11205446 CTTTGCACATCCCAAAGTC 59 NA Mus musculus 50 Acvr1c ENSMUSG00000026834 ENSMUST00000028178,ENSMUST00000112608,ENSMUST00000100085 1 3 4 81 2 58137404 58140106 CAGCTGACAACAAAGATAATGG 59 58137344 58137362 TAGTCATACAAGGAGCCCT 59 NA Mus musculus 50 Abca2 ENSMUSG00000026944 ENSMUST00000102919,ENSMUST00000114269,ENSMUST00000095124 3 3 3 80 2 25301855 25301966 TCATCTTTCTAGATGAGCCC 58 25302009 25302027 TGATGAGGTCCAGAATGAG 58 NA Mus musculus 50 4930571C24Rik ENSMUSG00000026963 ENSMUST00000028340 2 1 1 158 2 25143982 25144000 TTATTGCCCTCATTGTGGT 59 25144495 25144513 CTATGCGATCTTCCTGGAC 59 NA DesignNoJunction Mus musculus 50 Ola1 ENSMUSG00000027108 ENSMUST00000028517 2 1 4 93 2 72937412 72937431 TCATTAAGGCTGGATTTGCA 59 72935314 72937356 TTCGTTCCTTTCCTGATGG 59 NA Mus musculus 50 Ttc17 ENSMUSG00000027194 ENSMUST00000111238,ENSMUST00000111237,ENSMUST00000055081 3 3 4 83 2 94164569 94164587 CTGGACCACTTACATGGAG 59 94163315 94164523 AAGATTCTGCAGTACCTCTG 59 NA Mus musculus 50 Cops2 ENSMUSG00000027206 ENSMUST00000110463,ENSMUST00000110466,ENSMUST00000028635 2 3 4 86 2 125666111 125666130 AGCACTCTATGAGCAATCAC 59 125665205 125666062 ATCTTACCACCGCATTCTC 59 NA Mus musculus 50 Mfap1b ENSMUSG00000027238 ENSMUST00000110593,ENSMUST00000077436,ENSMUST00000110592,ENSMUST00000110591,ENSMUST00000110590 2 5 5 96 2 121399401 121402072 CCTATATCCTTCAAGCGGA 58 121399323 121399341 TTCTCTGAATGTTTCGGGA 58 NA Mus musculus 50 Adal ENSMUSG00000027259 ENSMUST00000028702,ENSMUST00000066155 3 2 3 80 2 120971787 120971806 AAGGAATTTGCAGATGATGG 58 120971849 120973987 CCTAGTCATTCCAGTAGCA 58 NA Nonspecific Mus musculus 50 Smox ENSMUSG00000027333 ENSMUST00000110189,ENSMUST00000110186,ENSMUST00000028806,ENSMUST00000110188,ENSMUST00000110180 1 5 10 171 2 131345994 131346155 AGTACCTGAAGGTGGAGAG 59 131346290 131346308 AACTGGATGACATGTGGAG 59 NA Mus musculus 50 Oprl1 ENSMUSG00000027584 ENSMUST00000071585,ENSMUST00000108765,ENSMUST00000108764,ENSMUST00000108768,ENSMUST00000108767 3 5 6 80 2 181453425 181453524 GTGGAGGATGAAGAGATCG 59 181453567 181453586 GATGCAGATGGCAAATACAG 59 NA Nonspecific Mus musculus 50 B230339M05Rik ENSMUSG00000027652 ENSMUST00000046274,ENSMUST00000109485 1 2 3 85 2 158266637 158266655 TGTGGGACATTATGTAGGA 57 158266703 158269054 GAGTTTAGAATAACGCTGGA 57 NA Mus musculus 50 Notch2 ENSMUSG00000027878 ENSMUST00000107028 2 1 2 189 3 97935198 97935216 ATTGGAGGCTACACTTGTC 59 97938491 97941229 CTTTGAAGTGGTAGGTTTCAC 59 NA Mus musculus 50 Notch2 ENSMUSG00000027878 ENSMUST00000079812 3 1 2 98 3 97939666 97939684 TACATCAACAACCAGTGTG 57 97939746 97941207 TTTGTCATACTTGCACGTC 58 NA Mus musculus 50 Ak3l1 ENSMUSG00000028527 ENSMUST00000102780,ENSMUST00000106946,ENSMUST00000030252,ENSMUST00000106945,ENSMUST00000106948,ENSMUST00000106947 2 6 6 61 4 101135659 101136162 ATCGAACTGTACAAGAGCC 59 101136187 101136205 ATTCTGTTAGTCTCCGTCC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Pla2g2e ENSMUSG00000028751 ENSMUST00000030531,ENSMUST00000105803,ENSMUST00000105804 3 3 3 152 4 138436345 138436363 TGACTATGGCTGCTATTGC 59 138436657 138436677 TCTCGAGTGATAGAGAAGAGG 59 NA DesignNoJunction Mus musculus 50 Trim63 ENSMUSG00000028834 ENSMUST00000105875 3 1 2 133 4 133881578 133881597 TTAGAACACATAGCAGAGGC 59 133883687 133884829 CATTGGTGTTCTTCTTTACCC 59 NA Mus musculus 50 Inpp5b ENSMUSG00000028894 ENSMUST00000094782,ENSMUST00000106196 3 2 3 88 4 124461597 124461615 GTCAAACAGGAACATGCAG 59 124461667 124462430 CCTCCTTTGTTACCCATCC 59 NA Mus musculus 50 Sfrs4 ENSMUSG00000028911 ENSMUST00000053819 2 1 2 169 4 131429772 131447127 GATCTGAAGAACGGGTATGG 59 131447259 131448008 TAACCATATCCACTGCGTC 59 NA Mus musculus 50 Ugt2b34 ENSMUSG00000029260 ENSMUST00000031181 1 1 2 80 5 87321816 87321835 CTGGACTTTCTCACAATGTC 58 87320494 87321775 ATTCTCCTTATAGGAAGGGTC 58 NA Mus musculus 50 Fbxl10 ENSMUSG00000029475 ENSMUST00000046073,ENSMUST00000086200,ENSMUST00000031435 1 3 3 80 5 123332490 123333341 CTGGATGCCTTAAGATTAAGGA 59 123332431 123332449 GGTTACACTTCGGACACTC 59 NA Mus musculus 50 Glcci1 ENSMUSG00000029638 ENSMUST00000050350 3 1 2 182 6 8377169 8487818 AACTTGTCCCGATTCTGTG 59 8487964 8508513 CAGCAACTAGGTGTCTGAG 59 NA Mus musculus 50 4631427C17Rik ENSMUSG00000029772 ENSMUST00000102995,ENSMUST00000115242,ENSMUST00000064872,ENSMUST00000115238 3 4 5 83 6 29844822 29844840 GGATGGATTCCGACTAGTG 59 29844887 29846337 ACCACATTCTTGTTCCCTG 59 NA Mus musculus 50 Klra2 ENSMUSG00000030187 ENSMUST00000032306 1 1 2 81 6 131178278 131178296 CATACTGGATTGCACTGAC 58 131170274 131178234 GCTGAAACAGGTTTAGATGG 58 NA Mus musculus 50 Bcl2l14 ENSMUSG00000030200 ENSMUST00000032321,ENSMUST00000111960 2 2 2 114 6 134374072 134377324 AGAGTGAAGTTGTGGATTCC 59 134377401 134377419 TCTTTGAGCTTGCTTCCTC 59 NA Mus musculus 50 Ptpro ENSMUSG00000030223 ENSMUST00000077115 2 1 2 80 6 137391235 137392052 ATATTCCTGGATACAACTCACC 59 137392091 137392111 TCTTCCAGAAGTCATTTCTGG 59 NA Mus musculus 50 Ttll3 ENSMUSG00000030276 ENSMUST00000032414,ENSMUST00000067255 1 2 3 80 6 113348863 113349665 AAGAAAGCCTTCATAGAGGAC 59 113349705 113349725 TGACTTCTCTTCCAACTTCAC 59 NA Mus musculus 50 Itgam ENSMUSG00000030786 ENSMUST00000098015,ENSMUST00000106242,ENSMUST00000064821 3 3 4 92 7 135229506 135229525 TATCAGCATATTGGCTTGGT 59 135229580 135244941 ATAAGAGCCAATCTGGCTG 59 NA Mus musculus 50 Ush1c ENSMUSG00000030838 ENSMUST00000107685,ENSMUST00000078680 2 2 4 103 7 53471441 53474678 AAGCCCAAGTATGATCAGG 59 53457013 53457031 GGATCAAAGCCTTCTTCGT 59 NA Mus musculus 50 Cckbr ENSMUSG00000030898 ENSMUST00000069707,ENSMUST00000033189 2 2 2 128 7 112582649 112582667 TCTGGATTGCTTATGGTCC 59 112583034 112583052 TATTAGCAGAAGCACGGAC 59 NA DesignNoJunction Mus musculus 50 2310007H09Rik ENSMUSG00000030946 ENSMUST00000106170 2 1 2 135 7 139834228 139834246 CTGCTCTACAAGCCATAGG 59 139842023 139862057 CATCTGGGTCTGAACTTCC 59 NA Mus musculus 50 Atrx ENSMUSG00000031229 ENSMUST00000113573,ENSMUST00000113574,ENSMUST00000033580,ENSMUST00000087810,ENSMUST00000101305 3 5 5 81 X 103083173 103084345 TCAAGGTCAAAGAGGAAACC 59 103083111 103083131 CATTTACATTCTCATCCGTGG 59 NA Mus musculus 50 Flna ENSMUSG00000031328 ENSMUST00000114299,ENSMUST00000033699,ENSMUST00000101454,ENSMUST00000114288,ENSMUST00000114289,ENSMUST00000114298 1 6 7 80 X 71475726 71475853 CAAGTTACAGCTTTGGCTG 59 71475664 71475684 ATAGTTATACTGTGGAGCCAG 58 NA Mus musculus 50 Atp2b3 ENSMUSG00000031376 ENSMUST00000114480,ENSMUST00000114479 2 2 4 87 X 70800499 70800517 AATTGACCATGCTGAACGA 59 70800568 70805214 CACTACCTCCATCTGTGTC 59 NA Mus musculus 50 Renbp ENSMUSG00000031387 ENSMUST00000114379 1 1 4 83 X 71175764 71175782 TTTCTGGATGGAGCATTCC 59 71175406 71175574 CAATACATCCATACCTTCCCA 59 NA Mus musculus 50 Sorbs2 ENSMUSG00000031626 ENSMUST00000037085,ENSMUST00000098788 1 2 4 91 8 46905117 46909125 AGAACCGAACGAAGATGAG 59 46909180 46911107 TTGAAGTTCCCACAAACCA 59 NA InUTR Mus musculus 50 Mlf1ip ENSMUSG00000031629 ENSMUST00000034045 1 1 2 93 8 47645245 47645263 TATCTACGCAGAAGACGAG 58 47645320 47647144 AGAAGGGTCCAAGTTTCTG 59 NA Mus musculus 50 Slc10a7 ENSMUSG00000031684 ENSMUST00000034111,ENSMUST00000109899,ENSMUST00000093416 2 3 4 95 8 81221147 81221165 TCATCTACACCACCTTCTG 58 81221221 81222430 GAACGGAGACTATTATGAACAG 58 NA Mus musculus 50 Mt4 ENSMUSG00000031757 ENSMUST00000034207 1 1 1 179 8 96662155 96662173 ATTGCAAATGCACAACCTG 59 96662795 96662813 CTGTGTAGTCACTTCCCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Bckdhb ENSMUSG00000032263 ENSMUST00000116537,ENSMUST00000034801 3 2 3 96 9 83882430 83882448 GGATTTGGCATTGGAATCG 59 83882506 83882757 CGTTGACAATCTGATCAAAGG 59 NA Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113685,ENSMUST00000050905,ENSMUST00000113684,ENSMUST00000030185 1 4 16 82 9 66877542 66878846 TGACTTAGAAGACGAGCTG 58 66877478 66877496 TCATATCGTTGAGAGCGTG 59 NA Mus musculus 50 Mier3 ENSMUSG00000032727 ENSMUST00000109270,ENSMUST00000109271,ENSMUST00000047412 1 3 4 109 13 112498555 112498573 CACCAGGGATAATGAACAG 57 112500006 112501905 CTGTCATTCCTTGAGATGC 58 NA Mus musculus 50 Centd2 ENSMUSG00000032812 ENSMUST00000107011,ENSMUST00000107010,ENSMUST00000098246,ENSMUST00000084896 1 4 6 167 7 108533547 108534076 TGAGTTTGACGACTCTGAC 59 108534739 108534757 TCATCTTCCGAATCATCCC 58 NA Mus musculus 50 Myh2 ENSMUSG00000033196 ENSMUST00000018640 1 1 2 91 11 67004886 67004906 TGGTATCTCAGTTATCAAGGG 58 67004959 67005109 GTTCTTGGCCTTTACTTCC 58 NA Mus musculus 50 Dnm2 ENSMUSG00000033335 ENSMUST00000091087 3 1 3 106 9 21294226 21298954 CATACCCAATCAGGTGATCC 59 21299023 21299041 ACAATGACTCAGCTGTCAG 59 NA Mus musculus 50 D030074E01Rik ENSMUSG00000033382 ENSMUST00000025177 2 1 2 80 18 21002745 21004091 AGAATCTAAAGTGGCAAGAC 57 21002684 21002704 CCAAGATTATACACAACTCCC 58 NA Mus musculus 50 Tubgcp5 ENSMUSG00000033790 ENSMUST00000032627,ENSMUST00000068721 1 2 4 80 7 63072018 63072619 CTTTGCAAGGTTGTATTTGG 57 63072662 63072680 TCTGATGATCTATCCACGC 58 NA Mus musculus 50 Fancd2 ENSMUSG00000034023 ENSMUST00000036340,ENSMUST00000101051 1 2 2 70 6 113485847 113485865 TTAAGGCTTCAGGACTCAC 58 113486708 113486727 GAAGATTACCTGATCCACAC 57 NA DesignNoJunction Mus musculus 50 Faah ENSMUSG00000034171 ENSMUST00000049095 2 1 2 97 4 115672202 115672662 GAGATTGAGATGTATCGCCA 59 115672124 115672142 TTCAAATCCAGAGCAGGAC 59 NA Mus musculus 50 Usp54 ENSMUSG00000034235 ENSMUST00000035340,ENSMUST00000112526,ENSMUST00000022356 3 3 4 80 14 21396199 21396220 TTTAGTAAGGACAGAAGGAAGC 59 21395910 21396160 CGGTGTAAATTCTTTAGCTGC 59 NA Mus musculus 50 Iqsec1 ENSMUSG00000034312 ENSMUST00000043863,ENSMUST00000101153 3 2 2 83 6 90618784 90619287 GAACCAGTACTATCCCAATGG 59 90618721 90618741 GGAGCGTTGAAGTTTATTAGC 59 NA Mus musculus 50 Brip1 ENSMUSG00000034329 ENSMUST00000044423,ENSMUST00000100673 3 2 3 81 11 85948917 85952278 TCAGTAACTCACAGGTTTGG 59 85948855 85948874 TCAGTATGCTGAAAGGTAGC 59 NA Mus musculus 50 Lif ENSMUSG00000034394 ENSMUST00000066283,ENSMUST00000109953,ENSMUST00000109951,ENSMUST00000040750 3 4 4 69 11 4168314 4168332 CAAGAATCAACTGGCACAG 59 4168364 4168941 CCCTTGAGCTGTGTAATAGG 59 NA DesignRelaxed Mus musculus 50 Ggta1 ENSMUSG00000035778 ENSMUST00000044232,ENSMUST00000113002 2 2 8 94 2 35269793 35277707 GTCAACAGAATTCCAGAGGT 59 35268927 35268947 TCTTCTTGATAACTGTGGGTC 59 NA Mus musculus 50 Ddx26b ENSMUSG00000035967 ENSMUST00000039374 2 1 2 98 X 53758189 53758207 TCAATGCAAATCACTCCTG 58 53758269 53759560 CCTTTCATACTTTCGTCCA 57 NA Mus musculus 50 Exoc1 ENSMUSG00000036435 ENSMUST00000113493 1 1 3 97 5 76966798 76966816 TTCATCTCCTGCATTTGGA 58 76966877 76969784 ACTTTAGGCAGTTCTTCCA 58 NA Mus musculus 50 Pml ENSMUSG00000036986 ENSMUST00000085673,ENSMUST00000114136,ENSMUST00000041209 2 3 3 93 9 58082730 58094789 CTGACTGACATCTACTGCC 59 58082655 58082674 CAATATCGCAATGGAGATGG 58 NA Mus musculus 50 Larp2 ENSMUSG00000037814 ENSMUST00000048490 3 1 2 189 3 40767893 40767913 CAGAGTGTTATCAACCAAGGA 59 40768062 40771304 CCCATTTGTGCTTATTAGCTC 59 NA Mus musculus 50 4921517L17Rik ENSMUSG00000038085 ENSMUST00000073942 3 1 4 80 2 156179034 156182269 TTCATGACAATGGGTTTCTC 58 156182312 156182330 TCCTCAGATTGATTGACCA 57 NA Mus musculus 50 Gabpb2 ENSMUSG00000038766 ENSMUST00000107209,ENSMUST00000098873,ENSMUST00000070774 2 3 5 80 3 94994527 94994545 CATCCAAACATCACTCCCT 59 94993197 94994484 ACAGTTAGAACTTGCTGTCC 59 NA Mus musculus 50 Ncam1 ENSMUSG00000039542 ENSMUST00000053131,ENSMUST00000114483,ENSMUST00000114481 3 3 4 81 9 49375579 49376448 GTGAAGATCTTCCAGAAGCT 59 49375517 49375535 AGACAATCACAGCATCCTC 59 NA Mus musculus 50 Tspan10 ENSMUSG00000039691 ENSMUST00000044105,ENSMUST00000106212,ENSMUST00000100155 1 3 3 106 11 120306043 120307403 CAGAACCTGTACTTTAACTGC 58 120307471 120307489 CATTGGGTGTTCACTACAG 58 NA Mus musculus 50 Nploc4 ENSMUSG00000039703 ENSMUST00000044271 2 1 2 86 11 120245966 120247094 GTGAAACACAGGACTTCCA 59 120245898 120245916 GATGGAAGTCGGAAATGGT 59 NA Mus musculus 50 Stk32a ENSMUSG00000039954 ENSMUST00000064055 1 1 2 152 18 43449712 43464657 TTACTTGATGAACATGCACC 58 43470094 43470112 TTCCTTGCTGGAAGTACTG 59 NA Mus musculus 50 Orc3l ENSMUSG00000040044 ENSMUST00000108142 3 1 3 80 4 34525268 34526999 CCTCGATGATAGCAAAGAG 57 34525206 34525224 TGAAGGTGATACAGGTCTG 58 NA Mus musculus 50 Myd116 ENSMUSG00000040435 ENSMUST00000042105,ENSMUST00000098456 2 2 2 85 7 52779154 52779172 GCTCAGATTGTTCAAAGCC 59 52778671 52778689 TGACTTTCTCAGCGAAGTG 59 NA DesignNoJunction Mus musculus 50 Myd116 ENSMUSG00000040435 ENSMUST00000042105,ENSMUST00000098456 1 2 2 84 7 52779153 52779171 CTCAGATTGTTCAAAGCCC 58 52778671 52778689 TGACTTTCTCAGCGAAGTG 59 NA DesignNoJunction Mus musculus 50 Mybbp1a ENSMUSG00000040463 ENSMUST00000100899 3 1 2 127 11 72258216 72258235 AAGTACATACGTGGGTACCT 59 72258325 72262668 TGGAGAAGAGGAAGGTAGG 59 NA Mus musculus 50 Cblc ENSMUSG00000040525 ENSMUST00000043822 2 1 2 190 7 20371655 20374328 AAGTGTCAGAGGAACAACTG 59 20370701 20370719 ACCTTTGATCTCACAACGG 59 NA Mus musculus 50 Adam22 ENSMUSG00000040537 ENSMUST00000115386,ENSMUST00000088752 1 2 13 116 5 8092341 8092360 ACCTCGATCTAACTCAACTG 58 8082261 8087992 GACAGGGTCCTAAAGTATGG 59 NA Mus musculus 50 Abcb1b ENSMUSG00000040584 ENSMUST00000115373,ENSMUST00000047753 2 2 2 80 5 8726966 8732300 GTTCTGGAAAGATTGCTACG 58 8732343 8732361 TGGTTTCAAACTTCTGCTC 58 NA Mus musculus 50 Phc1 ENSMUSG00000040669 ENSMUST00000079560,ENSMUST00000081849 1 2 3 88 6 122270327 122270963 CTCTGTAGAGTTAGAGAAGAAGG 59 122270261 122270279 TCTTAGAGCCTCGAAACTG 58 NA Mus musculus 50 Iqsec3 ENSMUSG00000040797 ENSMUST00000046373,ENSMUST00000051049 3 2 2 82 6 121336642 121336660 CGATGTGAACAAGCTACAG 58 121334307 121336597 ATAGCTTGAGAATCACAAGC 57 NA Mus musculus 50 Dlk1 ENSMUSG00000040856 ENSMUST00000056110,ENSMUST00000109844,ENSMUST00000109843,ENSMUST00000109846,ENSMUST00000109841 2 5 5 111 12 110696416 110697825 TGATCAATGGTTCTCCCTG 58 110697900 110697918 ATCTCACAGAAGTTGCCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Yeats2 ENSMUSG00000041215 ENSMUST00000090052,ENSMUST00000115560 2 2 3 81 16 20228829 20229574 GGACATGATCTTAAAGGCCA 59 20229618 20229636 AGATGCTGTCTGGTATCCA 59 NA Mus musculus 50 Phf8 ENSMUSG00000041229 ENSMUST00000046950,ENSMUST00000046962 3 2 6 93 X 148034048 148034066 AAACGAGAGTGAAGAGGAG 58 148034118 148055420 CAGAGATGGATAGATATACTCAGC 59 NA Mus musculus 50 BC055324 ENSMUSG00000041406 ENSMUST00000097493,ENSMUST00000045876,ENSMUST00000111491 3 3 3 80 1 165887669 165887688 TGATCGTCAACAAGAATTGG 58 165887024 165887626 CTTCATGCTTTGTTCCCTC 58 NA Mus musculus 50 Stx3 ENSMUSG00000041488 ENSMUST00000069285,ENSMUST00000112965,ENSMUST00000112964 1 3 5 97 19 11857586 11857604 AGTTGAATGTCATGCACAC 58 11856162 11857526 TATCAATTTCTTCCGAGCCT 58 NA Mus musculus 50 Serpina3a ENSMUSG00000041536 ENSMUST00000109965,ENSMUST00000021496 1 2 2 90 12 105357917 105357935 GCTGGGTATCAAGGAAGTC 59 105357989 105359539 CTGGTGGATCATCTGAGAG 58 NA Mus musculus 50 Arhgef11 ENSMUSG00000041977 ENSMUST00000090982 2 1 2 81 3 87537357 87537375 CTGGATAGGAATCCAGCTG 59 87537420 87539278 AGAAACAGTTCCCTTTCCT 58 NA Mus musculus 50 Zmym4 ENSMUSG00000042446 ENSMUST00000106108 1 1 2 92 4 126584472 126588043 ATACAAGCAGAAATCAGCC 57 126584398 126584417 CCCAAGCTATTGGTATTCTC 57 NA Mus musculus 50 Abcb4 ENSMUSG00000042476 ENSMUST00000003717 2 1 2 80 5 8946048 8946067 AACTGTTGTATCCTTGACCC 59 8946110 8947305 ACCGAATTCCTGTAAGGTC 58 NA Mus musculus 50 C130039O16Rik ENSMUSG00000042507 ENSMUST00000110294,ENSMUST00000046266 3 2 2 81 12 85503259 85503277 TATCAACCAGCAACATCCC 59 85501486 85503214 TCAGAGCTATTAGAGCGGA 59 NA Mus musculus 50 Ypel3 ENSMUSG00000042675 ENSMUST00000038614,ENSMUST00000106357,ENSMUST00000106356 2 3 3 89 7 133921603 133921830 CAACTCTGTAGTGAATGTGG 58 133921882 133921900 TTCTCACAGTGGATGTCAG 58 NA Mus musculus 50 Zmym1 ENSMUSG00000043872 ENSMUST00000055013,ENSMUST00000106102,ENSMUST00000106099 3 3 3 80 4 126728663 126731464 GAAGACATCTACTAAACCGC 58 126728602 126728620 ATCGCAATCATCTCATCTG 57 NA Mus musculus 50 Trp53bp1 ENSMUSG00000043909 ENSMUST00000065020,ENSMUST00000110648,ENSMUST00000064996 3 3 6 83 2 121033858 121034101 ACTGGAACCAGAGAAACAG 59 121033793 121033811 GAAGGACTTGTCATCTGGT 58 NA Mus musculus 50 Olfr649 ENSMUSG00000044899 ENSMUST00000106859,ENSMUST00000060440 3 2 2 60 7 111338302 111338324 GAGGTATACCACTATTCTCACAC 59 111338264 111338282 GAAAGAGATTCCCACAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sys1 ENSMUSG00000045503 ENSMUST00000109352,ENSMUST00000072452,ENSMUST00000054527 2 3 3 94 2 164288836 164288854 AATGATGTCCTTCGTCCTC 59 164289901 164289919 CAGTGACAGTGAAATCCAG 58 NA DesignNoJunction Mus musculus 50 Adamts6 ENSMUSG00000046169 ENSMUST00000065766 3 1 2 86 13 105234963 105234982 TGGAGATAATGAAGTTGGCT 58 105235031 105252323 TCTTGTCTTTGGACACCTC 59 NA Mus musculus 50 ENSMUSG00000046262 ENSMUSG00000046262 ENSMUST00000105754,ENSMUST00000105756,ENSMUST00000105757,ENSMUST00000105753 1 4 5 111 4 143798726 143799257 AGGTTCAAACCAGTAGGTG 59 143798633 143798651 TTCTCTGTCGTGAACTCTG 58 NA Mus musculus 50 Zbtb44 ENSMUSG00000047412 ENSMUST00000115222 3 1 3 93 9 30869698 30871824 ATGACGATGACAGTACAGAG 58 30871880 30871898 TTCTGAATACGGGTGAAGC 59 NA Mus musculus 50 Samd9l ENSMUSG00000047735 ENSMUST00000096130 3 1 2 151 6 3323973 3323991 TTAGCACTGCTTTAGTCTG 57 3323786 3323804 CTGAGACTCTTTGAAGGCT 58 NA DesignNoJunction Mus musculus 50 Krt35 ENSMUSG00000048013 ENSMUST00000103127,ENSMUST00000038839 3 2 2 84 11 99955965 99956176 TCAGGACCAAGTATGAGAC 57 99955899 99955917 AGATCATCCAGGATTCTGC 58 NA Mus musculus 50 Rgmb ENSMUSG00000048027 ENSMUST00000057264 2 1 1 146 17 15944761 15957647 CTGCTACAAACAAGGTCAC 58 15944633 15944651 TGTGAAGACTCTTCACGTC 59 NA Mus musculus 50 Selplg ENSMUSG00000048163 ENSMUST00000063167 1 1 3 97 5 114269250 114269269 GCTGATTATCCTCATCTTGG 57 114268835 114268853 CAAGGACAGGTATCCAGTG 59 NA DesignNoJunction Mus musculus 50 NP_001013772.1 ENSMUSG00000048411 ENSMUST00000059937 1 1 1 60 1 28833694 28833715 CAAGAGGATAAGACAGAATCAG 57 28833655 28833673 CAGAGTAGTGAGAAGAGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Duxbl ENSMUSG00000048502 ENSMUST00000049793 1 1 1 155 14 26803744 26803762 ACATCTGGCTAAGGAACTC 58 26806342 26806972 CTCCTTCTAGCTTCTTTAACTC 57 NA Nonspecific Mus musculus 50 Frmpd4 ENSMUSG00000049176 ENSMUST00000112147,ENSMUST00000112149,ENSMUST00000112146 2 3 3 60 X 163953828 163960029 CCTATCCATCTCCCAAATCAG 59 163953788 163953806 TTGGACTTCAATCTTGCCT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 A230107C01Rik ENSMUSG00000049676 ENSMUST00000069861 3 1 3 164 7 29995541 29995773 TCGAGAAGAACTATTTGAGC 57 29987352 29987370 GAATGAAGAGTGTGCTCTC 57 NA Mus musculus 50 Armcx6 ENSMUSG00000050394 ENSMUST00000052431,ENSMUST00000113194 3 2 2 125 X 131285489 131285507 GAAGGTGGGATTCATCCTG 59 131284747 131285092 GCGATTCTTGTCATGAATCTC 59 NA InUTR Mus musculus 50 Bpi ENSMUSG00000052922 ENSMUST00000065039 2 1 3 143 2 158100570 158101658 CTTGGCATGGTAAGAAGGA 59 158102732 158107202 CAGGTACTCCACCTTAAAGG 59 NA Mus musculus 50 Brsk2 ENSMUSG00000053046 ENSMUST00000075528 2 1 4 169 7 149184442 149184463 GTCACATTCACTTTACTCTCAG 58 149186785 149187977 TTCTTCTCGTCACATTTGGA 59 NA Mus musculus 50 Nrd1 ENSMUSG00000053510 ENSMUST00000102736,ENSMUST00000106644,ENSMUST00000065977 1 3 3 84 4 108730893 108730911 TCTTATGGAGCTGCTTGTG 59 108731234 108731602 GTAGACATGGTACCCAAGG 59 NA Mus musculus 50 Umodl1 ENSMUSG00000054134 ENSMUST00000066554,ENSMUST00000087861,ENSMUST00000066981,ENSMUST00000114555 1 4 4 81 17 31103653 31103671 CTCTGGACTTCAGAAGTGC 59 31103715 31105409 CATGCTCTTCTCTGTACCTG 59 NA Mus musculus 50 Pprc1 ENSMUSG00000055491 ENSMUST00000111900,ENSMUST00000062322 1 2 4 96 19 46135982 46136000 GATACTGCAGGATGAGACC 59 46136060 46136642 TAATCTGCTCTGCTCTCCA 59 NA Mus musculus 50 Pprc1 ENSMUSG00000055491 ENSMUST00000111900,ENSMUST00000062322 3 2 4 98 19 46135981 46135999 TGATACTGCAGGATGAGAC 58 46136061 46136643 ATAATCTGCTCTGCTCTCC 58 NA Mus musculus 50 Car10 ENSMUSG00000056158 ENSMUST00000042943,ENSMUST00000107863 3 2 5 84 11 93351922 93351940 GCTACACTTTGGGAGTGAG 59 93351988 93439994 GTGGATGAGTTGTACCTCC 59 NA Mus musculus 50 Pign ENSMUSG00000056536 ENSMUST00000073314 3 1 4 124 1 107462817 107465361 CTGATGATGCCTCTTCTCTG 59 107454655 107462730 GAGAGCTTCATACCCAGTG 59 NA Mus musculus 50 BC051142 ENSMUSG00000057246 ENSMUST00000078615,ENSMUST00000097348,ENSMUST00000114173 3 3 7 81 17 34558862 34558881 TGTTATCAATGAGGACCCTC 58 34558924 34577822 TTGAGTCAGTTCGCTATCTG 59 NA Mus musculus 50 Lepr ENSMUSG00000057722 ENSMUST00000102777,ENSMUST00000037552,ENSMUST00000106921,ENSMUST00000084387 1 4 4 80 4 101443983 101444001 TCTTTCCGGAGAATAACCT 57 101444045 101445453 ATACCTCATGTGTCTTCCA 57 NA Mus musculus 50 Rp2h ENSMUSG00000060090 ENSMUST00000115391,ENSMUST00000115387,ENSMUST00000033372 1 3 5 80 X 19974363 19974383 GGAATTTAATGGAGATGACGC 59 19974423 19974788 GATACAAACATCTTTGTCCCG 59 NA Mus musculus 50 Hist4h4 ENSMUSG00000060639 ENSMUST00000102977 3 1 2 258 13 22132864 22132883 TAAGCTGCTCAGTTTCTTCC 59 22132625 22132643 AAGCAGAAGGCTCTATTGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 1810073N04Rik ENSMUSG00000061306 ENSMUST00000103018,ENSMUST00000045402,ENSMUST00000076697,ENSMUST00000053692 3 4 4 84 11 119990568 119990586 CACTCCGGTTTAAAGTCCT 59 119989831 119990520 AGGATGGTTTCCACATTGG 59 NA Mus musculus 50 Tnnt3 ENSMUSG00000061723 ENSMUST00000073821,ENSMUST00000105958,ENSMUST00000078497,ENSMUST00000105950,ENSMUST00000105954,ENSMUST00000105953 2 6 20 182 7 149691424 149693662 AAGTCCAAGAAGATGCTGTC 59 149697210 149697228 CAAAGTGGCTGTCAATGAG 59 NA Mus musculus 50 Scfd2 ENSMUSG00000062110 ENSMUST00000072857 2 1 3 110 5 74608390 74621352 CATGTTCATGAAGGTGAGC 58 74608298 74608316 GCTACAAGGTCTTTGACCA 59 NA Mus musculus 50 Otof ENSMUSG00000062372 ENSMUST00000114747,ENSMUST00000074171 3 2 2 80 5 30674357 30675974 AAACCCAAGAAGTACGAGC 59 30674295 30674313 TCCCGTGAAGAAATCATCG 59 NA Mus musculus 50 Actg1 ENSMUSG00000062825 ENSMUST00000071555,ENSMUST00000106216 1 2 5 114 11 120209031 120209049 CACCTTCTACAATGAGCTG 57 120208649 120208954 GGTTTCAAACATTATCTGCG 57 NA Nonspecific Mus musculus 50 Vrk2 ENSMUSG00000064090 ENSMUST00000109504,ENSMUST00000078362,ENSMUST00000109505 3 3 3 81 11 26435587 26435606 TTTACAGAAACTCCTGGACC 59 26434292 26435543 CAGTACATCCAGCATCCTG 59 NA Mus musculus 50 Asb18 ENSMUSG00000067081 ENSMUST00000086882,ENSMUST00000097656 1 2 3 145 1 91849428 91850971 TATACCAGATGCACAAGCC 59 91849301 91849319 CTCAGGTAATGGTAGCTGG 59 NA Mus musculus 50 Uty ENSMUSG00000068457 ENSMUST00000044500 3 1 2 120 Y 525832 560956 AGACTGACTACTGGAAGCA 59 513014 523222 GAATGGTATTTCCTCTGGGT 59 NA Mus musculus 50 Zfyve19 ENSMUSG00000068580 ENSMUST00000090174,ENSMUST00000102519 2 2 2 155 2 119036560 119036927 TATAAGAAGCGTGTGGCAG 59 119037144 119037162 CTCTATCTCGGCTTGTGAG 59 NA Mus musculus 50 Itgad ENSMUSG00000070369 ENSMUST00000106237,ENSMUST00000033051 3 2 3 91 7 135329810 135332752 CTCTCAATGGATGGACCAG 59 135332804 135332825 AAGGTGGATCTCATATTTGAGG 59 NA Mus musculus 50 EG214403 ENSMUSG00000070594 ENSMUST00000111986 2 1 3 81 1 141628931 141628949 TTTGGAATTGATGGACCAG 57 141598547 141628886 TCCCTCTTGAGTTTATGCA 58 NA Mus musculus 50 Pramel4 ENSMUSG00000073723 ENSMUST00000097802,ENSMUST00000097800,ENSMUST00000097799 1 3 3 63 4 143697787 143697805 TACTTCCTGAAAGAACGCC 59 143698621 143698639 TAAGGGTCTCTAATGGACG 57 NA Nonspecific, DesignNoJunction Mus musculus 50 Bglap-rs1 ENSMUSG00000074489 ENSMUST00000107543,ENSMUST00000107542,ENSMUST00000075523 1 3 3 92 3 88172801 88173025 CTACCTTGGAGCTTCAGTC 59 88172727 88172745 TGGTTTGATAGCTCGTCAC 59 NA Nonspecific Mus musculus 50 Ddc8 ENSMUSG00000076433 ENSMUST00000103024 3 1 1 103 11 118202919 118202937 GTAATGTGTCCTCATTGGC 58 118195276 118195294 CTTCATCTTCGGAAGAAGG 57 NA DesignNoJunction, InUTR Mus musculus 50 IGKV9-120 ENSMUSG00000076515 ENSMUST00000103316 3 1 1 60 6 68000209 68000228 GGAGAAAGAGTCAGTCTCAC 59 68000250 68000269 GCCAGTTTAAGCTACTACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV15-1/DV6-1 ENSMUSG00000076841 ENSMUST00000103653 1 1 1 60 14 54179739 54179758 TACAAGCACCTTCTTAGTGG 59 54179778 54179799 CAATAGTAGAAGGCATTTGTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 0610010B08Rik ENSMUSG00000078890 ENSMUST00000109031,ENSMUST00000109030,ENSMUST00000109029 1 3 3 80 2 175650198 175650217 ATCCTTCTCAGAAGAGTCTC 57 175650257 175650483 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 0610010B08Rik ENSMUSG00000078890 ENSMUST00000109031,ENSMUST00000109030,ENSMUST00000109029 3 3 3 80 2 175650198 175650217 ATCCTTCTCAGAAGAGTCTC 57 175650257 175650483 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 2210418O10Rik ENSMUSG00000078894 ENSMUST00000099009 2 1 2 93 2 175459298 175459317 CCTATAGGAATCTCACAGCT 57 175457864 175459037 CTTTCATGCCTTCCATGAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 A2BE20_MOUSE ENSMUSG00000078896 ENSMUST00000109042 1 1 3 80 2 175303886 175305056 CTTGGAAGGCATGAAAGAC 58 175305100 175305118 ACTCTGATATGCAAAGGCT 58 NA Nonspecific Mus musculus 50 Mef2b ENSMUSG00000079033 ENSMUST00000072500,ENSMUST00000110143,ENSMUST00000110146,ENSMUST00000110141,ENSMUST00000110140 1 5 5 179 8 72688980 72688999 AAGAAGGCTTATGAGCTGAG 59 72689138 72689437 CTTCAGTGTCTGAAGGATATCC 59 NA Mus musculus 50 Rbm35b ENSMUSG00000079864 ENSMUST00000115979 2 1 2 60 8 108656932 108656953 CGATACATTGAACTCTTCAGGA 59 108656792 108656911 CATAGCGGTTAAGGACCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 NP_001094972.1 ENSMUSG00000080228 ENSMUST00000116477 3 1 1 142 8 28008361 28008380 CCTTGAGTCTTCCAAATCGT 59 28087985 28088003 TCTTCAGGACCCTGATAGG 59 NA DesignNoJunction Mus musculus 50 mmu-mir-201 ENSMUSG00000065404 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-24-2 ENSMUSG00000065541 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 ENSMUSG00000074924 ENSMUSG00000074924 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-669f ENSMUSG00000077038 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Cdc45l ENSMUSG00000000028 ENSMUST00000000028,ENSMUST00000115586,ENSMUST00000096990 2 3 3 81 16 18807424 18807445 AGAGGATGAAGATCTTTCAGAC 59 18805522 18807384 CACTATCTCCTCTTCTAACCG 59 NA Mus musculus 50 Tspan32 ENSMUSG00000000244 ENSMUST00000009396,ENSMUST00000075172,ENSMUST00000082008,ENSMUST00000105922,ENSMUST00000105924 1 5 7 85 7 150200893 150200911 CTTCGTGTATGATCAGGCA 59 150200960 150201498 CACAACACAGAAACGTGTC 59 NA Mus musculus 50 Dbh ENSMUSG00000000889 ENSMUST00000000910 3 1 1 91 2 27036617 27037001 GTAAACAGGTTCAGCAGTG 58 27037056 27037074 CGATTGAAAGAGTTCCAGG 58 NA Mus musculus 50 Bcl2l12 ENSMUSG00000003190 ENSMUST00000003290 2 1 1 91 7 52248148 52248166 GTGTTGAGCATGTACACAG 58 52246786 52246804 CAAGTTCAAGTCCACAGGT 59 NA DesignNoJunction Mus musculus 50 Rab3b ENSMUSG00000003411 ENSMUST00000106651,ENSMUST00000106650 2 2 3 85 4 108563129 108596517 CTGCAGATATGGGACACAG 59 108596566 108596584 ATGAGAATGAAGCCCATGG 59 NA Mus musculus 50 Rnf215 ENSMUSG00000003581 ENSMUST00000003677 1 1 1 82 11 4039795 4039813 TACAGGACTTGTGGTTCAG 58 4039858 4039953 GTTTGAACAAATCCTCCTGG 59 NA Nonspecific Mus musculus 50 Eif2ak4 ENSMUSG00000005102 ENSMUST00000005233,ENSMUST00000102527,ENSMUST00000110877,ENSMUST00000110874,ENSMUST00000110872,ENSMUST00000110875,ENSMUST00000110870 1 7 8 85 2 118248221 118252305 GACTTCCTGAAGAAGTGTG 57 118252353 118252372 TGAGGGTTTATAAAGCTGTG 57 NA Mus musculus 50 Corin ENSMUSG00000005220 ENSMUST00000005352 3 1 1 81 5 72826520 72826541 TATCAACATATCCTGCTCTTCG 59 72813435 72826478 GTAGAAGACCATGCCTGTC 59 NA Mus musculus 50 Tomm40l ENSMUSG00000005674 ENSMUST00000111327,ENSMUST00000005817 1 2 2 80 1 173150545 173150686 GGGAATCAGTGATCATGGT 59 173150483 173150502 GGTGATAAACTAGCTCTCCT 58 NA Nonspecific Mus musculus 50 Smpd4 ENSMUSG00000005899 ENSMUST00000006053,ENSMUST00000090159 3 2 2 87 16 17621606 17624003 TAGTTTCCTTCTGGCTAGC 58 17624053 17624072 ATCCTCAATGACTTTCACCA 58 NA Mus musculus 50 Aamp ENSMUSG00000006299 ENSMUST00000006462 3 1 1 85 1 74328642 74328660 ACTGTAAGACCTTTCAGGG 58 74328368 74328386 TTCATACCCTACCACAGCT 59 NA DesignNoJunction Mus musculus 50 Arpc2 ENSMUSG00000006304 ENSMUST00000113820,ENSMUST00000006467 3 2 2 80 1 74301521 74301539 CAATTCCAAGAAGAGGGCA 59 74301581 74302544 AGATTCCACATACATGGTCTC 59 NA Nonspecific Mus musculus 50 Rtl1 ENSMUSG00000006551 ENSMUST00000053088 1 1 1 60 12 110829753 110829773 CTAAGGTACTTTGACAGATCC 57 110829713 110829732 CCTCCTCTTCTTCATCATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mgst1 ENSMUSG00000008540 ENSMUST00000008684 1 1 1 82 6 138096256 138096274 TTTACCTCCTATGCAACGA 58 138096319 138099290 ACCTTGTTGGTTATCCTCTG 59 NA DesignNoJunction Mus musculus 50 Zmat5 ENSMUSG00000009076 ENSMUST00000009220 3 1 1 70 11 4628632 4628650 AGGAAATTCCTGCTGACAG 59 4630223 4630241 TCTTGTTCTGACATGTGGG 59 NA DesignNoJunction Mus musculus 50 6330409D20Rik ENSMUSG00000009551 ENSMUST00000009695 2 1 1 80 2 32593066 32593084 GCCTACCTTCACATAGTCC 59 32588544 32593022 TCCTGAAGGTGAAGTTCTC 58 NA Mus musculus 50 Oit3 ENSMUSG00000009654 ENSMUST00000009798 1 1 1 123 10 58901383 58901401 CAAAGGAAACTGCTGTCTG 58 58900555 58901296 GTCATAGAAATGGCCACAG 58 NA Mus musculus 50 Zfp179 ENSMUSG00000010086 ENSMUST00000060255,ENSMUST00000054927,ENSMUST00000102661,ENSMUST00000058348 2 4 4 80 11 61265246 61265264 GATGCTCAGTTCCTACCAG 59 61264526 61264833 TGAACGAACATCTCTAGATAGC 59 NA Mus musculus 50 Eya4 ENSMUSG00000010461 ENSMUST00000074366,ENSMUST00000092665 3 2 2 82 10 22875772 22875793 CACCATCGTCTACTATTTATGC 58 22871889 22875729 GTAGGATGGGTAATCCTGC 59 NA Mus musculus 50 Cdh23 ENSMUSG00000012819 ENSMUST00000073242,ENSMUST00000105462,ENSMUST00000105464,ENSMUST00000105463,ENSMUST00000105461 3 5 5 81 10 59839754 59840449 TGAATGAGAATGTGGGTGG 59 59839691 59839709 GACAGGACACTGTTGATCC 59 NA Mus musculus 50 Chfr ENSMUSG00000014668 ENSMUST00000112519,ENSMUST00000014812,ENSMUST00000100932 2 3 3 80 5 110572614 110572633 AGACTTACCCTTTACAGAGC 58 110572676 110573624 AGAGGTATGCCACATTGTG 59 NA Mus musculus 50 Efr3a ENSMUSG00000015002 ENSMUST00000067248 3 1 3 240 15 65693298 65697450 ATGATGTGGTTAGCAACAC 58 65700524 65700545 GTCTTGTAGAGCATAGACTCTC 59 NA DesignRelaxed Mus musculus 50 Abr ENSMUSG00000017631 ENSMUST00000108408,ENSMUST00000072740,ENSMUST00000108407,ENSMUST00000094012,ENSMUST00000040910,ENSMUST00000065028,ENSMUST00000039558 1 7 7 80 11 76237581 76237601 TTGGCATCTACAGGATATCAG 59 76236670 76237539 GGATGTCCTTGTTATTGGC 58 NA Mus musculus 50 Mlx ENSMUSG00000017801 ENSMUST00000107302,ENSMUST00000017945,ENSMUST00000107303 1 3 3 106 11 100950334 100950540 GTTCTACAGAAGACCATTGAC 58 100950607 100950626 ATTATCTTCAAGGCTGTGAC 57 NA Mus musculus 50 1700081L11Rik ENSMUSG00000018412 ENSMUST00000106977,ENSMUST00000018556,ENSMUST00000106972,ENSMUST00000106971,ENSMUST00000106974,ENSMUST00000069188 2 6 7 84 11 104197585 104197603 ATGTGAGGAGATGGAAAGG 58 104196998 104197537 TGATGACCTGTAAGACCTG 58 NA Mus musculus 50 1700125H20Rik ENSMUSG00000018479 ENSMUST00000100681,ENSMUST00000018623 3 2 2 81 11 84991945 84994398 TCCAGAGGAGATTCTTTAAGG 58 84994440 84994459 TGGGAGATTCTAGTCTTTCC 58 NA Mus musculus 50 Pip4k2b ENSMUSG00000018547 ENSMUST00000018691 2 1 1 80 11 97588068 97588086 TCGTCATCAAGACTGTGTC 59 97585827 97588025 ATTCCACTATGAACTGGTGG 59 NA Mus musculus 50 Lsp1 ENSMUSG00000018819 ENSMUST00000105968,ENSMUST00000018963,ENSMUST00000105967,ENSMUST00000038946,ENSMUST00000105966 1 5 5 80 7 149675872 149675890 GTACCAAGACTCTTTGGGA 58 149675934 149676262 CAGCTACTATATCCTGGCA 57 NA Mus musculus 50 Aldh3a1 ENSMUSG00000019102 ENSMUST00000108716,ENSMUST00000019246 1 2 2 80 11 61029041 61029059 CCAGACTACATCCTCTGTG 58 61029100 61029792 CCCATAGAAATCTTTCAGTGAC 58 NA Mus musculus 50 Pdk4 ENSMUSG00000019577 ENSMUST00000019721 3 1 1 80 6 5441144 5441605 TAGCAGTAGTCCAAGATGC 58 5441082 5441100 TGAGGTTTAATTCTGGCGA 58 NA Mus musculus 50 Ccdc12 ENSMUSG00000019659 ENSMUST00000019803 2 1 1 84 9 110612447 110612636 CATTGAGGAAGTGGACCTG 59 110613608 110613626 CTTCTCTAGCTTCTTGGCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Syne1 ENSMUSG00000019769 ENSMUST00000056571,ENSMUST00000095899,ENSMUST00000092721 2 3 5 81 10 5305072 5305576 AGACAGCTGGTGTAATTGAC 59 5305620 5305638 TGAAGGTTCTGCTTCATCC 59 NA Mus musculus 50 Herc4 ENSMUSG00000020064 ENSMUST00000092452,ENSMUST00000020258 3 2 2 80 10 62750316 62750653 CTGGCTATTAGCAATGACG 58 62750697 62750715 GAATAAGAGTCTAGCAGCG 57 NA Mus musculus 50 Ube2b ENSMUSG00000020390 ENSMUST00000109086 3 1 2 83 11 51811391 51813803 TTTCAAGCGATTGCAAGAG 59 51811326 51811344 ATAACTGCATTCCACTGCA 59 NA Mus musculus 50 Ascc2 ENSMUSG00000020412 ENSMUST00000109932,ENSMUST00000070257,ENSMUST00000109930 1 3 3 80 11 4556276 4556294 CATATTTACCCAGCAGCCA 59 4556337 4558234 AGGATATTGCTGAAGACCTG 59 NA Mus musculus 50 Tubd1 ENSMUSG00000020513 ENSMUST00000020821,ENSMUST00000108030,ENSMUST00000069503 2 3 3 82 11 86366440 86366460 GCTACAAGATCAGTACTCCAG 59 86366504 86368590 AGTTCTGCACAATGACCTC 59 NA Mus musculus 50 Twistnb ENSMUSG00000020561 ENSMUST00000020877 1 1 1 60 12 34121964 34121982 ATTCTGCTGGAGTGTTCTG 59 34122006 34122572 TGCTTAAGTTGCAAACTGG 58 NA DesignRelaxed Mus musculus 50 AW125753 ENSMUSG00000020607 ENSMUST00000020926 2 1 1 64 12 14157409 14157427 ACTTCTTCTCGGATGAGGA 59 14157363 14157381 CTTCACACCAAACTTGTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mrc2 ENSMUSG00000020695 ENSMUST00000106926 3 1 3 60 11 105187167 105187185 ATTGGAACATCTATGGCAG 57 105187207 105188045 CTTCCTTCTCCATAGTAAGGT 58 NA DesignRelaxed Mus musculus 50 Psmd12 ENSMUSG00000020720 ENSMUST00000106752,ENSMUST00000021063,ENSMUST00000106750 3 3 3 101 11 107354737 107354755 CTATGTTATCCTGGCTCCT 57 107354820 107355952 AGCAGATCCTTGTATTTGG 57 NA Mus musculus 50 Itgb4 ENSMUSG00000020758 ENSMUST00000021107,ENSMUST00000106461,ENSMUST00000106460,ENSMUST00000068981,ENSMUST00000106458 2 5 5 89 11 115864831 115864928 CATGTCCATCCCTATCATCC 59 115864978 115864998 ACGTCATCACTGTACATAAGG 59 NA Mus musculus 50 Ccdc103 ENSMUSG00000020930 ENSMUST00000021307 2 1 1 84 11 102743996 102744391 CTATGAGGAGTTCAGAGGT 57 102744439 102744457 CACAAATCTCTTTCCTCCC 57 NA Mus musculus 50 Sel1l ENSMUSG00000020964 ENSMUST00000021347 1 1 1 80 12 93054257 93054276 CTTTCTATAACCTCGCACAG 58 93053570 93054214 TCTTAAACAACTCCACTGC 57 NA Mus musculus 50 9030205A07Rik ENSMUSG00000021198 ENSMUST00000101099,ENSMUST00000085079 1 2 2 80 12 104299716 104301322 TATGGTTCTTAGTGAGCCT 57 104301366 104301384 GAAATACCATAGCCACCAG 57 NA Mus musculus 50 Sfrp4 ENSMUSG00000021319 ENSMUST00000002883 1 1 1 92 13 19719092 19719110 TCATCACCAATTCCTCCTG 58 19719166 19721945 GAAGCATCATCCTTGAACG 58 NA Mus musculus 50 Prelid1 ENSMUSG00000021486 ENSMUST00000021942 2 1 1 96 13 55425720 55425738 TGAACTCTGACAATAGCGG 59 55425798 55425898 AGACCAAATTCCTGGACAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Kctd6 ENSMUSG00000021752 ENSMUST00000022272 3 1 1 98 14 9052727 9054713 GCTATATGATGAGTGACCCAG 59 9054773 9054791 CTCCAAGCATAGAATCCGG 59 NA Nonspecific Mus musculus 50 Sema3g ENSMUSG00000021904 ENSMUST00000090180 2 1 1 136 14 32035622 32035748 ACTTTGACCAGCTAGAGGA 59 32036139 32036157 CCAGATGTCTACCATGTGG 59 NA Mus musculus 50 Dnajc3b ENSMUSG00000022136 ENSMUST00000022734 2 1 1 83 14 119371683 119371925 TCTCTAAGGATGAGAAGCC 57 119371972 119371990 TCAGAGCATTCACATTGTC 57 NA Mus musculus 50 Fyb ENSMUSG00000022148 ENSMUST00000090461,ENSMUST00000110659 1 2 2 80 15 6598857 6598875 TGGGAGAAGAAGTTTACGA 57 6598918 6601820 CAACACTCATTCCTTGACTC 58 NA Mus musculus 50 Ttc33 ENSMUSG00000022151 ENSMUST00000022751,ENSMUST00000081640 1 2 2 80 15 5162120 5167158 AGATAGTTCTGGCAATTCGA 58 5167201 5167219 AAAGGTCTTCCTTCCAGAG 58 NA Mus musculus 50 4930455B06Rik ENSMUSG00000022155 ENSMUST00000045736 1 1 1 80 15 4867185 4867203 CACTTGTCGTCTCTACAGG 59 4867396 4868250 CCAGGATAGATATTACCAGTAGTC 59 NA Mus musculus 50 Rai14 ENSMUSG00000022246 ENSMUST00000090339 3 1 1 83 15 10519063 10519081 TAAGCTCAGAACGAAGTGG 59 10517664 10519016 AGGACACATCACTCAACTG 59 NA Mus musculus 50 5730410E15Rik ENSMUSG00000022340 ENSMUST00000090057,ENSMUST00000110269,ENSMUST00000110267 2 3 4 81 15 44509127 44509145 CCTTCTTCTCCAAGTAGCA 58 44507045 44509083 TGTATCTTCCAGACCTTCTC 58 NA Mus musculus 50 Eif4a2 ENSMUSG00000022884 ENSMUST00000077605,ENSMUST00000115341,ENSMUST00000023599 1 3 3 86 16 23110212 23110311 ACAGAAGATACCTTTCTCCA 57 23110360 23110378 TCTGATCCTTAAACCCTCG 58 NA Mus musculus 50 Pja2 ENSMUSG00000024083 ENSMUST00000024888,ENSMUST00000024889 3 2 2 92 17 64660572 64660590 CATGAAAGAAGCTTGGGTC 58 64658994 64660516 CAATGAACTGGAACCTGAG 58 NA Mus musculus 50 Ihpk3 ENSMUSG00000024210 ENSMUST00000025046 3 1 1 138 17 27285526 27285545 CATCCTGGATCTGAAGATGG 59 27282259 27285425 TTGATAAACCTGCATGCCA 59 NA Mus musculus 50 Rdbp ENSMUSG00000024369 ENSMUST00000097343 2 1 1 85 17 34989595 34990376 GGGAAGTTAAAGGACCCAG 59 34990425 34990443 TCCTGTAGGTCCTCATCAG 59 NA Mus musculus 50 1110032A13Rik ENSMUSG00000024570 ENSMUST00000025462 3 1 1 90 18 80394460 80394479 ACAAATCATTGACGGAACTG 58 80394088 80394407 GAAGTCACAGAGACCTTGG 59 NA Mus musculus 50 Ms4a1 ENSMUSG00000024673 ENSMUST00000025576 1 1 1 94 19 11326361 11327676 CCAAATCTAATGTGGTTCTGC 59 11326287 11326307 GGAAGATACTCCACTTAGCTC 59 NA Mus musculus 50 Aip ENSMUSG00000024847 ENSMUST00000025767 3 1 1 149 19 4115219 4115334 AATCTGCAGATGAAGGAGC 59 4115088 4115106 CTTGTTGAGGATGGAGGAG 59 NA Mus musculus 50 Cpn1 ENSMUSG00000025196 ENSMUST00000026210 3 1 1 97 19 44034540 44034559 GGTACTTACTCTGTCACTGC 59 44031113 44034480 AGTTGGAAGTCAACCACTG 59 NA Mus musculus 50 Cwf19l1 ENSMUSG00000025200 ENSMUST00000026218 3 1 1 80 19 44206644 44207498 AACTTTGATCTGCTGTTGTG 58 44206583 44206601 GTTGCCGGTCTTATACTCC 59 NA Mus musculus 50 Fgf8 ENSMUSG00000025219 ENSMUST00000026240 3 1 4 265 19 45816163 45816412 GTTTCCCAACAGGTAACTG 58 45812642 45812660 ATGTAGAGACCTGTCTCTG 57 NA DesignRelaxed Mus musculus 50 Ifitm1 ENSMUSG00000025491 ENSMUST00000106042,ENSMUST00000106040 1 2 3 145 7 148154326 148155394 TACTCCGTGAAGTCTAGGG 59 148155503 148155521 CTAATGGCACAGACAACGA 59 NA Mus musculus 50 Il6 ENSMUSG00000025746 ENSMUST00000026845 3 1 1 86 5 30340030 30340050 TCTATACCACTTCACAAGTCG 59 30340098 30341387 AATTGCCATTGCACAACTC 59 NA Mus musculus 50 D3Ertd751e ENSMUSG00000025766 ENSMUST00000108065,ENSMUST00000026867,ENSMUST00000026868 2 3 3 173 3 41550487 41550506 ATACACTTGGGATGGTTTCC 59 41550639 41552604 GCTTCCACAACTTCATAATTCC 59 NA Mus musculus 50 Hgs ENSMUSG00000025793 ENSMUST00000106205,ENSMUST00000106203,ENSMUST00000026900 3 3 3 105 11 120332823 120332842 GATCTTGTACCTGATCCAGG 59 120332909 120333927 GAAGACATGTCCTTCTACCT 58 NA Mus musculus 50 Smad7 ENSMUSG00000025880 ENSMUST00000026999 3 1 1 122 18 75530566 75530584 TACTCCAGATACCCAATGG 57 75535595 75553491 AAGTTGGGAATCTGAAAGC 57 NA Mus musculus 50 Pftk2 ENSMUSG00000026023 ENSMUST00000114248 3 1 2 87 1 59387833 59401100 CTTCCTGATGAGGAGTCTC 58 59401151 59401169 GTCTCTTCCTGTAGGAAGC 59 NA Mus musculus 50 Ppil3 ENSMUSG00000026035 ENSMUST00000114348,ENSMUST00000081677,ENSMUST00000114345 3 3 3 83 1 58497738 58497758 GTAATTACTACAACGGCTGTG 59 58495244 58497693 CTCTTCCAGTACCTGTTGG 59 NA Mus musculus 50 Slc9a2 ENSMUSG00000026062 ENSMUST00000027231 1 1 1 81 1 40775836 40775854 TTCACGTCAATGAACAGCT 59 40775899 40783066 AAGTTGTACAGGACCACTG 59 NA Mus musculus 50 Inpp4a ENSMUSG00000026113 ENSMUST00000027287,ENSMUST00000114933,ENSMUST00000058307 3 3 3 82 1 37449815 37449834 TATCAATGTGGAGAGCTTGG 59 37449879 37452926 ATCGAGGTAGACAGTCCTC 59 NA Mus musculus 50 Prim2 ENSMUSG00000026134 ENSMUST00000027312,ENSMUST00000097795 2 2 2 83 1 33541643 33568870 CCCAGACAAGTTTGATAAAGG 58 33541580 33541598 AAAGGCGTATAGTCTGTCC 58 NA Mus musculus 50 Vil1 ENSMUSG00000026175 ENSMUST00000027366 2 1 1 83 1 74466244 74466379 CTGGAGAGGTGGAAATGTC 59 74466424 74466444 TCCACTGGATAATAAGCTTCC 59 NA Mus musculus 50 Dnajb10 ENSMUSG00000026203 ENSMUST00000116582,ENSMUST00000055223,ENSMUST00000082158 1 3 3 81 1 75236196 75237475 GAGCTCTTTGATGACTTGG 58 75237519 75237538 AAGAGAAAGTGAAGAAAGGG 57 NA Mus musculus 50 Speg ENSMUSG00000026207 ENSMUST00000087122,ENSMUST00000038230 3 2 3 81 1 75415626 75415644 AGGAGACTACGTTCCTGAG 59 75415689 75416812 GTAGGTCTCAGTCGATCCT 59 NA Mus musculus 50 Mterfd2 ENSMUSG00000026273 ENSMUST00000027492 1 1 1 136 1 95199395 95199413 GAGTTGTGAAGGTCCTCAG 59 95198355 95199298 CATCCTGAAATATGCATACTGG 58 NA Mus musculus 50 Lrrfip1 ENSMUSG00000026305 ENSMUST00000068167,ENSMUST00000097650 3 2 4 160 1 93001867 93003885 AGAACAAGGAGTTCGAGAG 58 93005196 93005216 CTGAAGATCAGAAATCTCCCT 58 NA Mus musculus 50 Scly ENSMUSG00000026307 ENSMUST00000027532 3 1 1 93 1 93199363 93199382 ATTATAAATGCAGCTCGAGC 58 93199438 93201860 AATTATTTGACTCGGTGCC 58 NA Mus musculus 50 Nphs2 ENSMUSG00000026602 ENSMUST00000027896 1 1 1 118 1 158243202 158246954 GCATAAAGGTTGTGCAAGAG 59 158248838 158248856 GTGATAGGTGTCCAGACAG 59 NA Mus musculus 50 Plxna2 ENSMUSG00000026640 ENSMUST00000027952 3 1 1 80 1 196626100 196626700 CGAGTATAAGACTCTGATCCTG 59 196626738 196626759 CAGTTTAGTACTTTCACTGGGA 59 NA Mus musculus 50 Mgst3 ENSMUSG00000026688 ENSMUST00000028005 2 1 1 200 1 169307457 169308432 CAAGGTAGAGTACCCTGTC 58 169303938 169303956 CCATATGCGTAAAGGACTC 57 NA Mus musculus 50 Ermn ENSMUSG00000026830 ENSMUST00000090940 2 1 1 60 2 57900234 57900255 TTCCAGATACAACACGATATCC 59 57900195 57900214 AATTCTCTGTTTGGTGTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fibcd1 ENSMUSG00000026841 ENSMUST00000028188 2 1 1 160 2 31672749 31672768 CCTAGAAGACTTTGACAACG 58 31672182 31672200 TAAACCTCATGCCACTGTG 59 NA DesignNoJunction Mus musculus 50 Pmpca ENSMUSG00000026926 ENSMUST00000114093,ENSMUST00000076431 3 2 2 80 2 26247473 26247936 AGATGATTCATGAAGCTGC 57 26247980 26247998 CGATCTTCGCTATGTTCTC 57 NA Mus musculus 50 Pag1 ENSMUSG00000027508 ENSMUST00000108384 2 1 1 80 3 9694122 9696129 CAGAAGAGGAGATCTCAGC 58 9694060 9694079 CTTTCATACATGGTCCAGGT 59 NA Mus musculus 50 Sall4 ENSMUSG00000027547 ENSMUST00000075044,ENSMUST00000103074,ENSMUST00000029061,ENSMUST00000109167 2 4 5 127 2 168578051 168578069 GAAAGAACTTCTCGTCTGC 58 168575949 168577961 CATGTAGTGTACCTTCAGGT 58 NA Mus musculus 50 Trpc3 ENSMUSG00000027716 ENSMUST00000029271 1 1 1 80 3 36537538 36539518 CCAAGAGATCGAGGATGAC 59 36537476 36537496 TTTCCATCATCGAAGTAGGAG 59 NA Mus musculus 50 Stxbp3a ENSMUSG00000027882 ENSMUST00000102621,ENSMUST00000029481 2 2 4 80 3 108608205 108608223 GCAGTTCTTGAAGAAGACG 58 108608021 108608163 CTTTGGAATTTCCTCCAACAC 59 NA Mus musculus 50 Cd1d1 ENSMUSG00000028076 ENSMUST00000029717 2 1 3 260 3 86802268 86802570 TCACCTAAAGAAGACTATCCC 58 86802028 86802046 GAGACCACGGACAAATAGG 59 NA DesignRelaxed Mus musculus 50 Cpne3 ENSMUSG00000028228 ENSMUST00000029885,ENSMUST00000108254 1 2 2 80 4 19482555 19482573 TAACATCAAAGTCGGACCC 59 19481029 19482511 TTTCTGTCCGTTCAACCTC 59 NA Mus musculus 50 Tmem68 ENSMUSG00000028232 ENSMUST00000029891,ENSMUST00000108388 3 2 2 81 4 3496562 3496580 CATAACTTGTGGGATGGTG 58 3491393 3496517 GAACTTCATAACCATGCCA 57 NA Mus musculus 50 Sh3gl2 ENSMUSG00000028488 ENSMUST00000107188,ENSMUST00000030212 3 2 4 158 4 85025307 85027322 AGATGGATATAGAACAGGTGAG 58 85031722 85031740 GTTTGGGCTGATATTCCCT 59 NA Mus musculus 50 D530049N12Rik ENSMUSG00000028590 ENSMUST00000030324 1 1 1 60 4 143995965 143995985 GACTCCAATATCTCCTCTCAC 59 143996005 143996025 GATATGTCAGAAGGAAGAGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Scp2 ENSMUSG00000028603 ENSMUST00000106699,ENSMUST00000030340,ENSMUST00000106700 2 3 4 121 4 107770650 107770668 AGATGTTTGGGTATGCTGG 59 107763913 107765431 TTGGAACTGGGAATACGTG 59 NA Mus musculus 50 Akr1a4 ENSMUSG00000028692 ENSMUST00000030455 2 1 1 82 4 116310647 116311577 GATCTTGCTTAGATGGCAG 57 116310583 116310601 GAATGTTCTGAAGGATGCG 58 NA Mus musculus 50 D4Ertd196e ENSMUSG00000028857 ENSMUST00000105907 2 1 1 64 4 132822828 132824120 AGTATGTCAGTGTTGGAGC 59 132822782 132822800 GATAATGCCGAGGAGAAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Arhgef16 ENSMUSG00000029032 ENSMUST00000030898 3 1 1 85 4 153657010 153659102 CAGTCAGAAGTTCTTTGAAGC 59 153656945 153656963 CATGGTCCTCCAAGATGTC 59 NA Mus musculus 50 Morn1 ENSMUSG00000029049 ENSMUST00000030915 1 1 1 80 4 154463629 154463647 CTACGAAGGCGAATTTGTG 59 154463691 154465007 CCAGAGTAGGTGTTTCCTG 59 NA Mus musculus 50 Gabrd ENSMUSG00000029054 ENSMUST00000030925 1 1 1 80 4 154760090 154760108 ACTTCAATGCCGACTACAG 59 154759785 154760046 CGTTCCTCACATCCATCTC 59 NA Mus musculus 50 Gnpda2 ENSMUSG00000029209 ENSMUST00000031117 2 1 1 81 5 69969381 69970754 CTAGGGAGGTGATGATCCT 59 69969318 69969338 ATGTGATTGACTCCTTCTTCC 59 NA Mus musculus 50 Ddx54 ENSMUSG00000029599 ENSMUST00000111876,ENSMUST00000031598 3 2 2 85 5 121069644 121069781 GAACCCTGACATAATCATTGC 59 121069828 121069846 CATACTCCACACTCTGCAG 59 NA Mus musculus 50 4921520G13Rik ENSMUSG00000029607 ENSMUST00000110717 3 1 2 151 5 144655641 144655660 GTTACAGACTACTGAGCCAG 59 144652680 144652698 CATCAGGTGAAGGGTAGTG 59 NA DesignNoJunction Mus musculus 50 4930588N13Rik ENSMUSG00000029660 ENSMUST00000031667 3 1 1 80 5 150248420 150255878 ATTTAATACGCCCAAAGAGC 58 150255921 150255939 GGTACTGGGACTCATTCAG 59 NA Mus musculus 50 Ephb4 ENSMUSG00000029710 ENSMUST00000111055,ENSMUST00000061244,ENSMUST00000111054 1 3 3 80 5 137795787 137798779 TACATCAAGGTGGACACAG 58 137798821 137798841 GATATTAACTTTCCCTGTGGC 58 NA Mus musculus 50 Bmp10 ENSMUSG00000030046 ENSMUST00000032125 3 1 1 65 6 87379344 87383559 GAGCTTCAAGAACGAACTG 58 87383588 87383606 AGGAGAGGATATTTCCGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Copg ENSMUSG00000030058 ENSMUST00000049966,ENSMUST00000113607 2 2 2 60 6 87839713 87839951 CCTTTATCTCATAAACCAGGG 57 87839973 87839991 AAAGAAAGCCTCAGTTGCT 59 NA DesignNoJunction Mus musculus 50 Timp4 ENSMUSG00000030317 ENSMUST00000032462 2 1 1 105 6 115197319 115197337 CTGTGCAACTACATTGAGC 59 115196486 115197251 CATAGCAAGTGGTGATTTGG 59 NA Mus musculus 50 Dmpk ENSMUSG00000030409 ENSMUST00000032568,ENSMUST00000108475,ENSMUST00000108473,ENSMUST00000108472,ENSMUST00000108471,ENSMUST00000108474 1 6 6 82 7 19672977 19672995 GATGTTCTATGGGCAGACC 59 19673041 19673359 ACAAGTGTTCCCTGTAGTG 59 NA Mus musculus 50 p ENSMUSG00000030450 ENSMUST00000032633 3 1 1 80 7 63678686 63678704 ACCCTGAAATTAGTTTGCC 57 63678748 63684696 TAAGTGTCCCATTACCTCC 57 NA Mus musculus 50 Myst1 ENSMUSG00000030801 ENSMUST00000033070 2 1 1 80 7 135065698 135065716 CAGGGAAGGAGATCTATCG 58 135065757 135067907 GGTTCTGACAGTATATCTTGTG 58 NA Mus musculus 50 Mki67 ENSMUSG00000031004 ENSMUST00000033310 3 1 1 80 7 142896474 142897306 AGACAATCATCAAGGAACG 57 142896412 142896430 TTTGATCATTTGTCCTCGG 57 NA Mus musculus 50 Wee1 ENSMUSG00000031016 ENSMUST00000033326 2 1 1 81 7 117269674 117270224 TGTTGATGAGCAGAATGCT 59 117270269 117270287 AGAGAAATAGCGAACGACG 59 NA Mus musculus 50 Slc6a14 ENSMUSG00000031089 ENSMUST00000033414 3 1 1 80 X 21298770 21298788 TTCAAAGTGTATTGCCGTG 58 21298830 21299554 TACAGCCAGTTACTATTGGTG 59 NA Mus musculus 50 Ptpn7 ENSMUSG00000031506 ENSMUST00000049449 2 1 1 93 1 137033954 137033972 CACTGTAGCAGACTTCTGG 59 137034029 137034353 TACACATTTCTCCTTGCCC 59 NA Mus musculus 50 Gins4 ENSMUSG00000031546 ENSMUST00000033950 2 1 1 93 8 24343142 24343160 GATCTGAAGGTCAGCATCC 59 24340166 24343088 ACTTCTCTATCTTCATGAGTCG 59 NA Mus musculus 50 Setd6 ENSMUSG00000031671 ENSMUST00000034096 3 1 1 94 8 98242223 98242381 CACCACACTGAAGGTACTG 59 98242439 98242457 AACTGTCGTCTTCTGTCTC 58 NA Mus musculus 50 AA960436 ENSMUSG00000031792 ENSMUST00000034245 2 1 1 80 8 97857425 97862542 TACATACCGTATGAGGCGA 59 97862585 97862604 TCTCGGTACAAACATCTGAG 59 NA Mus musculus 50 Lsm4 ENSMUSG00000031848 ENSMUST00000034311 1 1 1 64 8 73201734 73201752 TGGATGAACATCAACCTCC 59 73201857 73201875 ATCCTCCAGAACTTGTCAC 58 NA DesignNoJunction Mus musculus 50 Tfdp2 ENSMUSG00000032411 ENSMUST00000034982,ENSMUST00000112962 3 2 2 99 9 96217911 96217930 CTTCTTGGTTAAATCAGGGA 57 96217992 96218215 TGGTTTACACTTGATTGGG 57 NA Mus musculus 50 Ihpk1 ENSMUSG00000032594 ENSMUST00000035214 1 1 1 80 9 107943408 107947066 AAACTCTACAAGTTCCTCCTG 59 107947108 107947126 GGTACCCATCTTCAAGTCC 59 NA Mus musculus 50 1810008A18Rik ENSMUSG00000032977 ENSMUST00000045454,ENSMUST00000099540 3 2 2 226 10 76960238 76960256 ATTGAAGCCATAAAGCTGG 58 76951210 76952752 TCTTCTTCAAGAAGCTGCT 58 NA DesignRelaxed Mus musculus 50 Dhrs7c ENSMUSG00000033044 ENSMUST00000040574 1 1 1 91 11 67626181 67626199 ATGATCTCCAGGAGAACAG 58 67626254 67628508 TTAGAAGCTGCATAAGCTG 57 NA Mus musculus 50 BC059842 ENSMUSG00000033253 ENSMUST00000075406,ENSMUST00000048347,ENSMUST00000048601 2 3 3 82 4 118042274 118042292 GGCTATCCTTGGAACAGAG 59 118042017 118042228 GAGTACTGGTGCTCTTTGG 59 NA Mus musculus 50 Upb1 ENSMUSG00000033427 ENSMUST00000039925 2 1 1 88 10 74900948 74902608 ACTTTCAAGATGACGGGAC 59 74902660 74902678 TCCTTCACAATGTTGGGAC 59 NA Mus musculus 50 Ppp3r1 ENSMUSG00000033953 ENSMUST00000102880 3 1 1 90 11 17094265 17094675 AACAGAAGTTGAGGTTTGC 58 17094729 17094747 ATCATCTTCAACACCTGGA 58 NA Mus musculus 50 Fstl5 ENSMUSG00000034098 ENSMUST00000038364 3 1 1 80 3 76340273 76392874 CTTCCAAGTGAATGTTCCTC 58 76392917 76392935 CTAAGGCTTGCAGTTACAC 58 NA Mus musculus 50 Ccdc15 ENSMUSG00000034303 ENSMUST00000037275 1 1 1 80 9 37155372 37155390 AGGCCATAATACCAGTTGG 59 37151606 37155328 CGTATGCTGAAGTATGTGC 58 NA Mus musculus 50 Pkd2 ENSMUSG00000034462 ENSMUST00000086831 2 1 1 80 5 104928335 104931314 CTATGAAGAGTTCCAAGTACTG 57 104931355 104931373 GCATCAATCTTGGAAACGA 58 NA Mus musculus 50 Galp ENSMUSG00000034660 ENSMUST00000037553 1 1 1 80 7 6162971 6165442 CTGTGGAAGATCATTGATGG 58 6165485 6165503 TTTGACAAACGTTTCTCCC 58 NA Mus musculus 50 Gns ENSMUSG00000034707 ENSMUST00000040344 3 1 1 81 10 120828529 120829746 GACCAGGAGGTATTTGTCG 59 120829791 120829809 CAGGGTCTATACTCTTGGC 58 NA Mus musculus 50 Rundc1 ENSMUSG00000035007 ENSMUST00000040561 2 1 1 160 11 101292713 101292731 ATCAGTTCCCTTTCCACTG 59 101292855 101293408 CTTCCCACTTCATCTTGGA 58 NA Mus musculus 50 Oaz1 ENSMUSG00000035242 ENSMUST00000060987 1 1 1 70 10 80291108 80291126 CAGCTAGCATCCTGTACTC 59 80291238 80291256 CCTGGTCTTGTCGTTAGAC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Frmpd1 ENSMUSG00000035615 ENSMUST00000044773,ENSMUST00000107804 1 2 2 80 4 45286313 45287189 ATGCCACTTTGATGTTACAG 58 45287232 45287250 TGATGATCTGGCTAATCCC 58 NA Mus musculus 50 Tmem59l ENSMUSG00000035964 ENSMUST00000045286 1 1 1 115 8 73008324 73008441 AAGTTCCAGCCTCTAACTG 58 73008227 73008245 AACTTGTAAGGAGGTGTGC 59 NA Mus musculus 50 6330500D04Rik ENSMUSG00000036006 ENSMUST00000110383,ENSMUST00000110384,ENSMUST00000038477 3 3 5 197 13 24786120 24787445 GGAAATCACCTGGTATCCC 59 24788374 24788392 GTGGCAAAGAAAGTGTCTC 58 NA Mus musculus 50 Card11 ENSMUSG00000036526 ENSMUST00000085786 2 1 1 80 5 141359718 141361443 TCAACCATGAAGGATACCG 59 141359656 141359674 GGCGGATATAGAACGAGTC 59 NA Mus musculus 50 Psma8 ENSMUSG00000036743 ENSMUST00000040860 2 1 1 97 18 14885128 14889499 GCTAAAGCAGAAATATACCCAG 58 14889557 14889575 GATACAATCTTGGGATGCC 57 NA Mus musculus 50 Entpd8 ENSMUSG00000036813 ENSMUST00000044078,ENSMUST00000114380,ENSMUST00000114378,ENSMUST00000114376 1 4 4 93 2 24937588 24937606 ATCCCTGTTTGTGTACCAG 59 24937661 24938458 GATTCCAGGTCCTTCTATCTG 59 NA Mus musculus 50 Sstr4 ENSMUSG00000037014 ENSMUST00000047292,ENSMUST00000109962 2 2 2 60 2 148221399 148221418 GTCATCTTCGTGATCCTACG 59 148221440 148221459 TGAGTAGGTAGATGTTGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Azgp1 ENSMUSG00000037053 ENSMUST00000035390 2 1 1 91 5 138428863 138428881 CAAGGCATACCTAGAGGAG 58 138428936 138430795 CAGTGGGAGGATCTATTCG 58 NA Mus musculus 50 Ppp1r14a ENSMUSG00000037166 ENSMUST00000048187 2 1 1 245 7 30076570 30076588 GGAATTGGACAGTGAAGAG 57 30078363 30078381 GAAACAATCTGGGCTTTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 4930427A07Rik ENSMUSG00000037466 ENSMUST00000049271 3 1 1 83 12 114399526 114399544 CTGGAGAGTGAGAACATCC 59 114399591 114399932 AACTGTATCCATCCACTGC 59 NA DesignRelaxed Mus musculus 50 Zdhhc18 ENSMUSG00000037553 ENSMUST00000084238 2 1 1 83 4 133169593 133169724 TGACCCTTCTTTCTCAAGG 58 133168915 133168933 AGAAGCAGATGACCAACTC 59 NA Mus musculus 50 Tob1 ENSMUSG00000037573 ENSMUST00000041589 1 1 1 60 11 94075175 94075193 GAGTGGTTTGGACATTGAC 58 94075217 94075235 GATCCAGACACTCAAATCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pcdh18 ENSMUSG00000037892 ENSMUST00000035931 2 1 1 87 3 49557260 49557278 GATTCTCCGATAGACAGGC 59 49549182 49557209 TACATAGCCTCATTGCTGC 59 NA Mus musculus 50 Bcl9 ENSMUSG00000038256 ENSMUST00000046521 2 1 1 81 3 97016890 97017621 GAGATGGCAAATAAGGCTG 58 97016827 97016846 TAGAGATGTTCTGGATGTGG 58 NA Mus musculus 50 Ostm1 ENSMUSG00000038280 ENSMUST00000040718 1 1 1 88 10 42418001 42418019 TTCATTCTCTTCCTGCCTG 59 42418070 42420298 AGACGTTTGGGTAGAATGAG 59 NA Mus musculus 50 Gcnt1 ENSMUSG00000038843 ENSMUST00000067276 1 1 1 157 19 17404965 17407607 TCTAAACGTGATATCTTGTCCC 59 17404829 17404847 CCGAAACAAGTTTCTCAGC 59 NA InUTR Mus musculus 50 Htr5a ENSMUSG00000039106 ENSMUST00000036227 1 1 1 75 5 28169727 28177309 GAGGTGAAGAATGCTACAC 57 28177348 28177366 CTTCTGTCTGGAAGGTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tekt5 ENSMUSG00000039179 ENSMUST00000043415,ENSMUST00000115831 2 2 2 80 16 10383018 10386166 TTCCAGATTCGAGATAACCG 59 10382957 10382977 GTCAATATACTGTGCAGAGCT 59 NA Mus musculus 50 Mocos ENSMUSG00000039616 ENSMUST00000068006 2 1 1 82 18 24851112 24854380 AGTTAAATGCCAGTGACGA 59 24854425 24854444 AATAATATTGGCACGGAAGC 58 NA Mus musculus 50 Nploc4 ENSMUSG00000039703 ENSMUST00000044271,ENSMUST00000103017 2 2 2 80 11 120270978 120270996 TTGGATGGATATTCACGGA 58 120270204 120270935 AATAGGTGTCCTTATTCCGA 57 NA Mus musculus 50 Flywch1 ENSMUSG00000040097 ENSMUST00000045517,ENSMUST00000115465,ENSMUST00000086325 3 3 3 84 17 23897214 23897233 TAGGATTGGAGACTCTGAGG 59 23893756 23893774 GTCTTTAGGAACTCAGGCC 59 NA DesignNoJunction Mus musculus 50 Btnl9 ENSMUSG00000040283 ENSMUST00000046522,ENSMUST00000066531 3 2 2 85 11 48996526 48996544 TCTGAAGCAAATACCTCGG 59 48994382 48996477 AGACCTTGTCTGAGTTCAC 58 NA Mus musculus 50 Aqr ENSMUSG00000040383 ENSMUST00000043160,ENSMUST00000102543 2 2 2 80 2 113953300 113953319 GCAAAGACCTTAATTGTGGA 58 113952752 113953258 GATTGTATTACGTTTGGGCT 58 NA Mus musculus 50 Rc3h1 ENSMUSG00000040423 ENSMUST00000035911 3 1 1 80 1 162893903 162893923 CAATTACGGCTAGAATTGCAG 59 162893963 162895092 GTTACTAACAGCCTCTAGTCC 59 NA Mus musculus 50 Mybbp1a ENSMUSG00000040463 ENSMUST00000100899 1 1 2 92 11 72258268 72258286 CAGTTGACTATGATGGTGG 57 72262667 72262771 ACAGATCACTGGGTATCTG 58 NA Mus musculus 50 BC018242 ENSMUSG00000040563 ENSMUST00000046371 2 1 1 116 9 21743808 21745132 TTCGTCTTTGTGGAGTCTG 59 21745212 21745230 ATAAGCGCTGTCATAGCAG 59 NA Mus musculus 50 Nrl ENSMUSG00000040632 ENSMUST00000062232 2 1 2 73 14 56141322 56142935 CATCACATAAAGAACACCTCTC 58 56141270 56141289 ATATTCCATAGCCAAGGGAC 58 NA DesignRelaxed, InUTR Mus musculus 50 Slco4c1 ENSMUSG00000040693 ENSMUST00000071985 2 1 1 80 1 98717885 98720281 ATTGCTAGGTACAATACCTGG 59 98717825 98717844 CATTCATTGACATCCCACAG 58 NA Mus musculus 50 Ddi2 ENSMUSG00000040715 ENSMUST00000038278 3 1 2 114 4 141245217 141245235 CCATGATGCATGTAGTGTG 58 141241483 141241501 TCAAACCCATCTGAAGTCG 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Kcna2 ENSMUSG00000040724 ENSMUST00000038695 1 1 1 260 3 106906399 106906417 AGAAGAGTACCTCAGGCTC 59 106907074 106907092 CATAGGTGTCTTGTGGGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Wdr25 ENSMUSG00000040877 ENSMUST00000047115 1 1 1 81 12 110263336 110264630 TCTTCCATGAGAGGTACAC 57 110264675 110264693 TAGTTGCCATTGGTTTGTG 58 NA Mus musculus 50 Oosp1 ENSMUSG00000041857 ENSMUST00000048214 3 1 2 81 19 11742896 11761832 ATGCACAATCAGAGTCCTC 59 11742833 11742852 TATCTTCTGTCCATCCAGGA 59 NA Mus musculus 50 Lce3b ENSMUSG00000042031 ENSMUST00000046234 1 1 1 157 3 92736942 92737517 CTAGTCAACTGACTCCTGC 59 92737638 92737656 AGAGTTTGTAGCACAGCAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Tbca ENSMUSG00000042043 ENSMUST00000046644 2 1 1 171 13 95602408 95607068 CATTAAGAAGCAGGCAGAG 58 95612658 95612676 TAGCTTTACGGAATCCAGC 59 NA DesignRelaxed Mus musculus 50 Olfr631 ENSMUSG00000042219 ENSMUST00000059011,ENSMUST00000106863 1 2 2 60 7 111077734 111077754 GTACTCCTCCATTATTACCGT 58 111077776 111077794 CCTGAGGATGACACATAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sestd1 ENSMUSG00000042272 ENSMUST00000102660,ENSMUST00000044107,ENSMUST00000102659 3 3 3 81 2 77030629 77034890 AGGAAACAAAGATGTGAGGA 58 77030567 77030588 CCTCTTCACACTTAAACAACTG 59 NA Mus musculus 50 A930021C24Rik ENSMUSG00000042655 ENSMUST00000043061 1 1 1 80 13 105636131 105648376 CCTAGAAGGCAACATAAACAG 58 105636071 105636090 TCAGCTTCATAGAAGGTCTC 58 NA Mus musculus 50 Obfc1 ENSMUSG00000042694 ENSMUST00000086929 2 1 3 95 19 47582360 47583225 ACACTAATCTTGTAACCACC 57 47576196 47582302 CCTTCTCCATATGGTTTGG 57 NA Mus musculus 50 Tom1 ENSMUSG00000042870 ENSMUST00000078847 3 1 1 81 8 77582735 77582754 TACTGACCTGATTGACATGG 59 77582797 77583098 CAGTCGATTGTTCATTCCTG 58 NA Mus musculus 50 Ccdc52 ENSMUSG00000043065 ENSMUST00000050897 3 1 1 80 16 44375892 44376916 TGTGGATAATGTAGAGGGTC 58 44376959 44376977 AATTCAACCACTTCTTCCC 57 NA Mus musculus 50 4631422O05Rik ENSMUSG00000043336 ENSMUST00000057595 1 1 1 60 16 57571588 57571607 GACTACAAGAGCCTCATTCC 59 57571629 57571648 TCTCCTCATAGAACTGACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 4932442L08Rik ENSMUSG00000043549 ENSMUST00000044989,ENSMUST00000113902 1 2 3 157 X 91602680 91604334 TAAAGCCGTCAACATCCTG 59 91602541 91602559 TTTGTCAGACGAAGTGTCC 59 NA InUTR Mus musculus 50 E430028B21Rik ENSMUSG00000043702 ENSMUST00000052932 3 1 1 70 14 27485437 27485867 AAAGGTGGATACATTCGTCTC 59 27485387 27485405 AGATCACGTGAGACATGTC 59 NA DesignNoJunction Mus musculus 50 Gpr75 ENSMUSG00000043999 ENSMUST00000109430,ENSMUST00000055730 2 2 2 60 11 30791969 30791988 TATCAACCAGATGCCAATCC 59 30792011 30792029 GAAGTTGATGGCTGATACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Arf6 ENSMUSG00000044147 ENSMUST00000050063 1 1 1 73 12 70473799 70473817 AAGATCTTCGGGAACAAGG 59 70473854 70473872 TACAGGATCGTTGTCTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 9130011J15Rik ENSMUSG00000044600 ENSMUST00000058733 3 1 1 61 8 75092792 75092811 GTATTTCCGGATCTTCATCG 58 75091703 75092768 ACAGTACGATCATGCAGAG 59 NA DesignNoJunction Mus musculus 50 Slc38a6 ENSMUSG00000044712 ENSMUST00000101313 2 1 2 113 12 74393169 74393187 CTCCTGGCTTCTTACTCAG 59 74411175 74411985 ATAACAGCTCTTTCCAGGT 58 NA Mus musculus 50 Ucn3 ENSMUSG00000044988 ENSMUST00000058610 1 1 1 60 13 3940801 3940819 CTACAACACTGGACCAGTC 59 3940759 3940780 GTTCTTCTTGACCTCAGATAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 AI467606 ENSMUSG00000045165 ENSMUST00000056288 1 1 1 60 7 134235855 134235873 CTGTGGACCTTGTATTCCC 59 134235895 134235915 TATGATGAAGAAGGCTGTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Morn2 ENSMUSG00000045257 ENSMUST00000061703 1 1 1 85 17 80693908 80694862 GATGACAAGATGAATGGCT 57 80694911 80694929 CCATGAAACATGTTGTCCT 57 NA InUTR Mus musculus 50 Olfr624 ENSMUSG00000045780 ENSMUST00000062144 3 1 1 61 7 110818985 110819004 GATTCGAATGGCTTGTTCAG 59 110818943 110818961 AAATCACCAGAGACAGAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cradd ENSMUSG00000045867 ENSMUST00000099332 3 1 3 99 10 94785268 94785287 GGAATTTCCCTGGGTAAGAG 59 94784544 94784562 TTTCAGATCACTGCTTCCA 58 NA DesignNoJunction Mus musculus 50 9930021J03Rik ENSMUSG00000046138 ENSMUST00000059484 3 1 1 60 19 29791738 29791759 ATACCTCTTCCAGAATTATGCC 59 29791699 29791717 TTCCCGAGATTTGATGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC025546 ENSMUSG00000046441 ENSMUST00000056972 2 1 1 60 8 112747023 112747041 TGGTTATCAGAACCTTCCA 57 112747063 112747083 CAAGAGGTCATGAACATTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Bst2 ENSMUSG00000046718 ENSMUST00000051672 2 1 1 137 8 74059714 74060265 GCTTGAGAATGAAGTCACG 58 74058602 74058620 AACAGTGACACTTTGAGCA 59 NA Mus musculus 50 4930432E11Rik ENSMUSG00000046958 ENSMUST00000053635 3 1 1 95 7 30359121 30359139 ATCACTTATGTCTGTGCCA 58 30359195 30359512 GTTCTTCTAACAATCTTCCTGG 58 NA Mus musculus 50 V1re9 ENSMUSG00000047031 ENSMUST00000058362 3 1 1 60 7 11165348 11165367 TCTCTTCCATCTTACAAGGC 59 11165307 11165325 TTTAGGAGCCACCAATTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nipa1 ENSMUSG00000047037 ENSMUST00000052204 2 1 1 106 7 63235266 63240784 GACCAATCCAGTGTTTGTG 58 63235178 63235197 TGTAGACCATGATGTTGGTG 59 NA Mus musculus 50 Ngrn ENSMUSG00000047084 ENSMUST00000061677 1 1 1 73 7 87406810 87409277 CAGATCCGGTATTTACATAAGG 58 87409311 87409329 CTGACATCAAAGCCTTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 V1ra9 ENSMUSG00000047203 ENSMUST00000058039 3 1 1 60 6 90219712 90219731 GGATACATGGTGACTTTCCT 59 90219752 90219772 TGGTGATATGGAGAAATTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc36 ENSMUSG00000047220 ENSMUST00000076592 3 1 1 90 9 108308995 108309013 ATGGTTGAGTCAGTGAGAG 58 108308167 108308944 CCATAAATTCTGCTTGTCTAGC 59 NA Mus musculus 50 Depdc2 ENSMUSG00000048960 ENSMUST00000027056 2 1 1 80 1 11100498 11102833 TCCTGGGAAGTGAATTTGTC 59 11102875 11102894 CTTGTCCTAAGTGAACACCT 59 NA Mus musculus 50 Olfr350 ENSMUSG00000050015 ENSMUST00000055130 3 1 1 60 2 36706266 36706284 GATCTGCAAAGCATTGTCC 59 36706307 36706326 ACCATAATACAGAGACACCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr745 ENSMUSG00000050028 ENSMUST00000062534 3 1 1 60 14 51262437 51262455 GATTTGTATCTGCTGGGTG 58 51262479 51262497 GGAGATGAGGACAATTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc25a44 ENSMUSG00000050144 ENSMUST00000057935 1 1 2 65 3 88220035 88224438 TACCACTTCTATGCAGAGC 58 88219988 88220006 TTGAAAGACAATGTGAGGG 57 NA DesignNoJunction Mus musculus 50 0910001L09Rik ENSMUSG00000050552 ENSMUST00000062067 1 1 1 123 5 138699891 138699909 GGACCTTGAGAACGATGAG 59 138699996 138700281 TTCACCAAAGACCACAGAC 59 NA Mus musculus 50 2310002B06Rik ENSMUSG00000050668 ENSMUST00000091915 2 1 1 80 17 79241554 79243162 GAGTGAAGATTTGAGTGTGC 59 79243204 79243223 CACCAAATGCAATACAGGTG 59 NA Mus musculus 50 9030420J04Rik ENSMUSG00000050730 ENSMUST00000034333 3 1 1 81 9 9148244 9155310 GTAGACTGGAGTGTGAGTG 59 9148181 9148200 AACTGGAATATGGTTCCGAC 59 NA Mus musculus 50 Taar8a ENSMUSG00000050804 ENSMUST00000051133 3 1 1 106 10 23797166 23797184 CATCACTCCTGCCTATGTC 59 23797254 23797272 TGGCTTTCTTAAACCAAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr832 ENSMUSG00000050884 ENSMUST00000060601 1 1 1 60 9 18749493 18749513 GTCATCATGAATCCCAAACTC 59 18749534 18749553 GGATACTTAGCAAGAAGGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tbc1d22a ENSMUSG00000051864 ENSMUST00000109385,ENSMUST00000063414 3 2 2 96 15 86130123 86130144 GGAAACAGAAGGAATACTTTGC 59 86130201 86131989 ATGTCGATATGGATCTGGC 58 NA Mus musculus 50 Epx ENSMUSG00000052234 ENSMUST00000049768 3 1 1 80 11 87678403 87678919 GAGATGGAGACAGATTCTGG 59 87678342 87678361 ATAAAGAGATTCGCCTCAGG 59 NA Mus musculus 50 2810055G20Rik ENSMUSG00000052450 ENSMUST00000068704 2 1 1 102 16 77501763 77501781 GTCCTGTCTTAACTGAGCA 58 77501844 77556176 TCAGGATAACAGAGATGAACAG 59 NA InUTR Mus musculus 50 1700030K09Rik ENSMUSG00000052794 ENSMUST00000064853 3 1 1 82 8 74969356 74973353 GAAAGGTGTTCTTGGATCC 58 74973399 74973417 AGGAGACTTTAAGCTGGAC 58 NA Mus musculus 50 Casc3 ENSMUSG00000052915 ENSMUST00000037915,ENSMUST00000107487,ENSMUST00000107485,ENSMUST00000037930 3 4 4 144 11 98660634 98660652 TCCAAGCCTTTCTCATGTG 59 98661396 98661414 TAATGGGAGAGTGCTTAGG 58 NA DesignNoJunction Mus musculus 50 OTTMUSG00000021246 ENSMUSG00000053049 ENSMUST00000065257 1 1 1 80 7 103944075 103944093 TTGGTTTGGAGGATGTGAG 59 103941323 103944031 ATGTCAAGGCAGAATCACC 59 NA Mus musculus 50 4930563E22Rik ENSMUSG00000053574 ENSMUST00000066087 1 1 1 185 11 72028898 72028916 CAAGGAGACATCGACTGTC 59 72029065 72029083 GACACCTCAAGGAACTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr112 ENSMUSG00000053852 ENSMUST00000114762,ENSMUST00000066533,ENSMUST00000096431 1 3 3 89 X 54226587 54226605 ATGAAGGAAAGTGTTCGGG 59 54226656 54230780 CCTAACATTTATCCAACCTGC 59 NA Mus musculus 50 ENSMUSG00000053980 ENSMUSG00000053980 ENSMUST00000066742 3 1 1 60 10 9254404 9254422 AGATCTACTCTGACACCTG 57 9254362 9254381 TAATATTCGCCCTTCTTTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tusc1 ENSMUSG00000054000 ENSMUST00000066774 2 1 1 62 4 93001163 93001181 AAAGTGTTGTGAGGACCAG 59 93001119 93001137 TCAAAGCATCAAAGATGGG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Kcmf1 ENSMUSG00000055239 ENSMUST00000068697 1 1 1 80 6 72800429 72800448 GGAGATCCTAATCATGTCAC 57 72799604 72800389 CGATTCATCTAAATCTCTAGGG 57 NA Mus musculus 50 Zfp101 ENSMUSG00000055240 ENSMUST00000038834 2 1 1 137 17 33523687 33523705 ACTTTGTTGGATTCCAGTC 57 33519516 33523371 CTCAATCACTTGAGTTCTGAG 58 NA Mus musculus 50 NM_001011753.1 ENSMUSG00000055340 ENSMUST00000075319 1 1 1 60 17 37746840 37746859 TACCTCCAACTATCAATCCT 57 37746799 37746818 ACAACCCTCTTTATTGTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Alk ENSMUSG00000055471 ENSMUST00000086639 2 1 1 80 17 72224329 72224348 AGGAAGTTCTGGAGTTTGTC 59 72223535 72224287 TCATTATCCGGTATACAGGC 58 NA Mus musculus 50 OTTMUSG00000015868 ENSMUSG00000055494 ENSMUST00000069111 1 1 1 141 2 156397633 156401121 GAATCTCACTAAGAAGCCCA 59 156401225 156401243 TATTTCAGGTTGGGCTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930572J05Rik ENSMUSG00000056665 ENSMUST00000070923 3 1 1 61 15 74552211 74552229 GTAGTACAGCACTTGTGCA 59 74553906 74553924 TGTTTCAAGTCTTCTGGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1383 ENSMUSG00000057767 ENSMUST00000077143,ENSMUST00000077164 3 2 2 87 11 49338006 49338024 ACCTGTCCATGTGTATTCC 58 49338074 49338093 ATAAATCAGAGGGTTCAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000057913 ENSMUSG00000057913 ENSMUST00000071522 2 1 1 60 14 67411338 67411356 GTGAGCAAGAACATAGACC 57 67411379 67411398 TTTGGTTACCTGATGAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mdn1 ENSMUSG00000058006 ENSMUST00000071642,ENSMUST00000108170 1 2 2 80 4 32854962 32854980 GCATCTCTTTCACAACAGC 59 32855022 32855637 ATAGTCTCCTCTTAGTTTGGC 58 NA Mus musculus 50 Gstm1 ENSMUSG00000058135 ENSMUST00000106671,ENSMUST00000004140 3 2 2 87 3 107817920 107817938 CTTGAAGACCATCCCTGAG 59 107817770 107817869 CACATAGGTGACCTTGTCC 59 NA Nonspecific Mus musculus 50 Osm ENSMUSG00000058755 ENSMUST00000075221 1 1 1 169 11 4138531 4139392 CTCTTGGAGCCCTATATCC 58 4139525 4139543 TCCAGTTGGTACAAGACTC 58 NA Mus musculus 50 Zfp422 ENSMUSG00000059878 ENSMUST00000057540,ENSMUST00000112880,ENSMUST00000079749 1 3 3 60 6 116576712 116576731 AAAGCCCTATAAGTGTGACG 59 116576671 116576689 CTGGATGAGATTGGAGCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG245174 ENSMUSG00000060336 ENSMUST00000073782,ENSMUST00000109924 1 2 2 89 2 150062810 150063981 CTAGAAGACATGGAAGGCT 58 150064034 150064052 GGCTCTGATATGCAATGAC 58 NA DesignNoJunction Mus musculus 50 Zfp143 ENSMUSG00000061079 ENSMUST00000084727,ENSMUST00000061729 1 2 2 122 7 117220681 117223790 TCACCTTAAGGTCCATGAG 58 117225321 117225342 CCAGTATGAGTTCTGAAATGAC 58 NA Mus musculus 50 MGI:99543 ENSMUSG00000061227 ENSMUST00000074086 3 1 1 80 X 28236597 28236616 GTCCGAATGTAGTCAGAGTC 59 28236217 28236555 TCCATGTTCATCAAACCCTC 59 NA Nonspecific Mus musculus 50 Tmem32 ENSMUSG00000061273 ENSMUST00000059899 1 1 1 95 X 53848603 53850963 GCATCGTTCTTATATGCGA 57 53844318 53844336 TAACAGGTAACTGCAAAGG 57 NA DesignNoJunction Mus musculus 50 Exosc5 ENSMUSG00000061286 ENSMUST00000079634 1 1 1 70 7 26451346 26452721 CTATTCTGACGCTGAGCTC 59 26452755 26452773 AGAATCGGAAGATGTGCTG 59 NA DesignNoJunction Mus musculus 50 Olfr320 ENSMUSG00000061344 ENSMUST00000082307 3 1 1 60 11 58498138 58498156 TGGACTCTCCACATATACC 57 58498180 58498198 CACTACTTTGTCCCTTCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC062115 ENSMUSG00000061371 ENSMUST00000085664 2 1 2 124 10 81522688 81523045 CAGAAGAATTCATACTGGAGAG 57 81523127 81523148 GACTACATTCATAGGGTTTCTC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Myt1l ENSMUSG00000061911 ENSMUST00000092649,ENSMUST00000076157 3 2 3 131 12 30539210 30540091 ACTTAATAACTCTGTCTGGCTG 59 30541044 30541062 AGTCACTGAACATGAGCAG 59 NA Mus musculus 50 NP_001104788.1 ENSMUSG00000061974 ENSMUST00000079639 2 1 1 60 8 48907558 48907578 GGGTTCTAGCCATTATTACCA 59 48907600 48907618 TTCAGCTCCAAGTTAAGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnj15 ENSMUSG00000062609 ENSMUST00000037154,ENSMUST00000113859 3 2 9 202 16 95479876 95479894 ACTTTGAAGAACCCTCAGC 59 95513496 95517208 CTTTGGACCACTCTGTAGG 59 NA DesignRelaxed, InUTR Mus musculus 50 BC050092 ENSMUSG00000062794 ENSMUST00000086281 1 1 1 135 9 22062589 22062610 GATATCATTTGAAGACGTAGCC 59 22058378 22062493 GTTCATACAGTGCCCTAGG 59 NA Nonspecific Mus musculus 50 4932422M17Rik ENSMUSG00000062946 ENSMUST00000081006 1 1 1 60 5 123590453 123590471 AATTCAGGACATCTCAGGC 59 123590495 123590513 CCATTCTGTCCTTAACTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr874 ENSMUSG00000063350 ENSMUST00000115004 1 1 1 123 9 37554549 37554567 TATATGATTGTGGTGCCCA 58 37554654 37554672 TCATGATACTGCTCCTCTG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Crem ENSMUSG00000063889 ENSMUST00000082141,ENSMUST00000025069,ENSMUST00000025070 1 3 6 86 18 3288079 3295046 GGCAATACATTGCTATAGCTC 58 3288013 3288031 TTGTTAATGCCTGGAGTCC 59 NA Mus musculus 50 Pepd ENSMUSG00000063931 ENSMUST00000075068 3 1 1 80 7 35754534 35754554 AAGACAGACATGGAACTAGAG 58 35754595 35756690 TACAGCCTTCATTACCTCAC 59 NA Nonspecific Mus musculus 50 Nr6a1 ENSMUSG00000063972 ENSMUST00000112877,ENSMUST00000076275 2 2 2 88 2 38740732 38740750 TCAGGATGAATTGGCAGAG 59 38615941 38728125 GGACGGAAACAGGTATATGG 59 NA Mus musculus 50 A130090K04Rik ENSMUSG00000064065 ENSMUST00000086896,ENSMUST00000058132,ENSMUST00000105617,ENSMUST00000105618,ENSMUST00000078070 3 5 5 111 10 3391833 3391851 CTTCTACTTTGCAGCAGAG 58 3409433 3411279 CTCACTGTAACATTCTTCATCC 58 NA Mus musculus 50 Fbln2 ENSMUSG00000064080 ENSMUST00000041544,ENSMUST00000113498 3 2 2 82 6 91216425 91218541 CATTGTGAAGATGTGAACGA 58 91218586 91218604 CAGTAGCACTGATAGGAGC 59 NA Mus musculus 50 Plcxd1 ENSMUSG00000064247 ENSMUST00000086687,ENSMUST00000112535 2 2 2 158 5 110529301 110529319 TAAGAACGTGTTGACCGTC 59 110530413 110530431 CAGTATGTCATCGTGTCGT 59 NA DesignNoJunction Mus musculus 50 Gpbar1 ENSMUSG00000064272 ENSMUST00000077985 2 1 1 64 1 74325908 74325926 GTCAGTCTTGGCCTATGAG 59 74325952 74325972 ATGAGATGAGCGATAACAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mt-Co1 ENSMUSG00000064351 ENSMUST00000082402 2 1 1 62 MT 5362 5381 ACAAAGATATCGGAACCCTC 59 5406 5424 GTGCAGTACCCACTATTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-199b ENSMUSG00000065554 ENSMUST00000083620 1 1 1 60 2 32174003 32174022 TACCCAGTGTTTAGACTACC 58 32174045 32174063 ACCAATGTGCAGACTACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem42 ENSMUSG00000066233 ENSMUST00000084733 2 1 1 194 9 122930688 122931304 GGTCAATATTGGCTTATGTGTC 59 122931984 122932003 CATAAGATCTCCTGGCACTC 59 NA DesignNoJunction Mus musculus 50 Cbln4 ENSMUSG00000067578 ENSMUST00000087950 3 1 1 95 2 171864539 171864557 GAATCTGTCTTTGTGGCAC 59 171863056 171864481 CATCAAGTTAACCTGGATGG 58 NA Mus musculus 50 Rya3 ENSMUSG00000068008 ENSMUST00000088950,ENSMUST00000109760 2 2 2 86 2 153751586 153751604 TCTATCTCTTCAGCACCGT 59 153751654 153753034 CATTCCTGGGAACCATCTC 59 NA Mus musculus 50 Slc4a5 ENSMUSG00000068323 ENSMUST00000113900 1 1 1 80 6 83214348 83214367 TTGCATTTGTTCGTCTTGTC 59 83214408 83215680 GTATGAACAGAAATCTGGTGG 58 NA Nonspecific Mus musculus 50 Olfr458 ENSMUSG00000068574 ENSMUST00000090156 1 1 1 60 6 42410143 42410162 GAATCCTCTCGTCTACAGTC 58 42410102 42410120 CAGAACTCGACTGAAAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 NM_001104618.1 ENSMUSG00000068999 ENSMUST00000049571 1 1 1 62 3 64295590 64295608 TCATCCTGTCCATCTTTGG 58 64295247 64295564 TACACAAATCTCCGACAGC 59 NA DesignRelaxed Mus musculus 50 Zfp748 ENSMUSG00000069204 ENSMUST00000053289 3 1 2 110 13 67647638 67647656 ATTTCTCTGCAGAGGAGTG 58 67646341 67647564 TAGAGAAAGCAAGACCCAG 58 NA Nonspecific Mus musculus 50 Prdm6 ENSMUSG00000069378 ENSMUST00000091900,ENSMUST00000115399 3 2 3 85 18 53696379 53699856 AGTAGTTCAGTACAGGTCGA 59 53699904 53699922 TGTCATTGTACCACACCAG 59 NA Mus musculus 50 Tmem19 ENSMUSG00000069520 ENSMUST00000092170 3 1 1 84 10 114784333 114784710 ATAAGGAAGGAGGACAGAG 57 114784267 114784285 TCTATCATGTAGAGCAGGG 57 NA Mus musculus 50 4930572O03Rik ENSMUSG00000069720 ENSMUST00000092696 3 1 1 80 5 15159398 15159416 TTTGGTGGAATTGAACCTG 58 15158593 15159357 GTTTCTGAGACCTGATATTCTG 58 NA Nonspecific Mus musculus 50 Slc25a16 ENSMUSG00000071253 ENSMUST00000044977 3 1 1 93 10 62405454 62407067 TTTGAGAAGTGCCTTACCA 58 62407124 62407142 AGTTCAGAGATAAGCCACG 59 NA Mus musculus 50 Vmn2r66 ENSMUSG00000072241 ENSMUST00000071867 2 1 1 63 7 92155243 92155261 TAGATGTTCTTTGCCACCA 58 92155198 92155217 AAATACAGTTGTGGTTGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 4933425L03Rik ENSMUSG00000073228 ENSMUST00000101609 1 1 1 80 12 13295599 13296694 TTACCTTGTCAGTGTTGGA 58 13296738 13296756 ATTCCATGCGGATAATGAC 57 NA Mus musculus 50 ENSMUSG00000073464 ENSMUSG00000073464 ENSMUST00000097412 1 1 1 60 17 11924602 11924622 TCTCAAACTGAGAGGAATGAC 59 11924562 11924581 GAATGCAATCCCAAGTTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 9630014M24Rik ENSMUSG00000073576 ENSMUST00000097595 2 1 1 90 18 38777382 38777400 CAGGTTCAGGAAGAGACAG 59 38802063 38802082 TCTGAAATGTCAAAGGACCC 59 NA DesignNoJunction Mus musculus 50 4933415F23Rik ENSMUSG00000073730 ENSMUST00000073179 1 1 1 60 1 23108918 23108937 ACAACCCGGATAAAGATGAC 59 23108877 23108897 TTGACGATGATCTTATCTGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000008953 ENSMUSG00000073763 ENSMUST00000097904 1 1 1 120 4 121656775 121668722 GAGATCACTCTATTCGCGA 58 121656011 121656029 CCAGGACTTCTTTCTCCAC 59 NA DesignNoJunction Mus musculus 50 Olfr1330 ENSMUSG00000073768 ENSMUST00000094830 2 1 1 60 4 118566144 118566162 GGGTCTGTGGTTTATTCTC 57 118566186 118566204 CAATATGGCAGACTCATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gm1966 ENSMUSG00000073902 ENSMUST00000098144 3 1 1 60 7 113745473 113745491 TACCTCAGAGAAACACAGC 58 113745431 113745449 CACCAGTAGCAATGGAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:96020 ENSMUSG00000073940 ENSMUST00000098192 3 1 1 178 7 110961298 110961970 GATCCTGAGAACTTCAGGC 59 110961138 110961158 CCTTTGTGCATAGACAATAGC 59 NA DesignNoJunction, InUTR Mus musculus 50 A930006D01Rik ENSMUSG00000074112 ENSMUST00000088866 3 1 1 71 8 108929712 108929730 CAGGAAGGGAACATTTCCA 59 108929659 108929677 CTGATGATGGCAGTTTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Defcr21 ENSMUSG00000074447 ENSMUST00000076754 3 1 1 60 8 22165346 22165366 AAGAGACTAATACTGAGGAGC 58 22165388 22165406 CCAAAGGAGACAGACACAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 1700034I23Rik ENSMUSG00000074619 ENSMUST00000099123 1 1 1 60 3 40706096 40706114 CTTATTGGAGGTGTCACTG 57 40706054 40706072 CCAGCTTTCCAACTTTCTG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Fkhl18 ENSMUSG00000074676 ENSMUST00000099200 3 1 1 61 2 152758765 152758783 ATGGCTATCCAGAGTTCAC 58 152758722 152758740 ATGATGTAGCGGTAGATGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1312 ENSMUSG00000074947 ENSMUST00000099600 2 1 1 60 2 111883065 111883083 CATGATGGGAAACTCACTG 58 111883023 111883041 AGGAGAGTGTAAGTGGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1295 ENSMUSG00000074959 ENSMUST00000099613 3 1 1 60 2 111404929 111404950 CATATACCTACATCCTTGTCAC 57 111404890 111404908 AAAGCCTTAGATGCTCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1164 ENSMUSG00000075136 ENSMUST00000099834 1 1 1 60 2 87933891 87933909 CAGGATGAATCCCAAACTC 57 87933849 87933867 AACAAAGGATAAGTGGCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1090 ENSMUSG00000075172 ENSMUST00000099875 3 1 1 60 2 86594452 86594471 TTGGGTTCTTATGTCAATGC 58 86594411 86594429 CACTGTGATGAGAAGAGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 AI790298 ENSMUSG00000075289 ENSMUST00000100021 3 1 1 60 19 4165780 4165798 ATGTGGAGCTCAAGATGAC 59 4165738 4165757 CCCATTCGAGGGTTAATCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV3-12 ENSMUSG00000076595 ENSMUST00000103396 1 1 1 76 6 70468261 70468279 CCTGTTATGGGTACTGCTG 59 70468560 70468578 CTAAGGAAGCAGGAGACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV14-2 ENSMUSG00000076847 ENSMUST00000103659 2 1 1 67 14 54260721 54260739 CATGGTACCATCAGTTCCC 59 54260770 54260788 TTTATTGGACACTGGACGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 A2A4M7_MOUSE ENSMUSG00000078256 ENSMUST00000105053 1 1 1 98 11 99776074 99776094 ATATCACCCTCTACTCCTGAC 59 99776154 99776172 AGAGTTGGATTCAGAGCTG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 A2A4U0_MOUSE ENSMUSG00000078261 ENSMUST00000105058 1 1 1 215 11 99654194 99654212 CCTGCTGTGATAGTTCCAG 59 99653997 99654015 AAGAACCACTAGAGCATGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp541 ENSMUSG00000078796 ENSMUST00000108509 2 1 1 81 7 16677645 16677664 AGACTCTGTTACTCAGAGGA 58 16677708 16678203 GTCCAGATGTCTGAACCTG 59 NA Mus musculus 50 Olfr1344 ENSMUSG00000078807 ENSMUST00000108558 3 1 1 162 7 6377561 6379800 ATGAGAAAGATCTGTCCTCC 58 6382048 6382067 ACCAAGAATAAGAACAGCAC 58 NA Mus musculus 50 Etohi1 ENSMUSG00000078891 ENSMUST00000109033 2 1 1 60 2 175597193 175597212 TCTCTACAAAGGTGTGATGG 59 175596941 175597171 CCAACTGTAACCTATAGCTG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 A2APL1_MOUSE ENSMUSG00000079001 ENSMUST00000109783 3 1 1 64 2 153318555 153318573 AGTGTATTCTGCAGGAGAC 58 153318601 153318619 AGAATGGAAAGTCAGGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700110I01Rik ENSMUSG00000079407 ENSMUST00000112812 1 1 1 82 14 3270801 3270819 CAGTGAATCAGAGCAGGAG 59 3270865 3304684 ATCAATGCTACTTGGTCCC 59 NA Nonspecific Mus musculus 50 A2ALC4_MOUSE ENSMUSG00000079476 ENSMUST00000113602 2 1 1 81 X 100104682 100104848 GTTCTTCAGGAGAGGATGC 59 100104893 100104911 TCTTGATCACTGTGCATGG 59 NA InUTR Mus musculus 50 Apoo ENSMUSG00000079508 ENSMUST00000113898,ENSMUST00000113897,ENSMUST00000113896,ENSMUST00000113895 2 4 4 64 X 91627519 91627537 AACATCTCACAACTCCGAC 59 91627563 91633017 TGGGAGTATATTTCCTGACAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 4933416I08Rik ENSMUSG00000079593 ENSMUST00000114828 3 1 1 152 X 50881417 50881834 CAACAGAAGTTTGTGTTTCC 57 50880385 50881302 TGGCTTTAGAAATGCTGTC 58 NA DesignRelaxed Mus musculus 50 Zbtb9 ENSMUSG00000079605 ENSMUST00000114926 3 1 1 60 17 27111454 27111474 CCAAAGTACTATCTGGAGAGG 59 27111495 27111514 GAGGACAGCAAGTATCTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Q99N48-5 ENSMUSG00000079730 ENSMUST00000115768 2 1 1 62 17 6673094 6673115 GTCCTATATCGTGATCAAACTG 58 6673138 6675372 TGATTTCAGTTTCCGGACC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Amy2 ENSMUSG00000079850 ENSMUST00000098667 3 1 1 80 3 113152360 113152486 CGTCAAATCAGGAACATGG 58 113152298 113152317 GTTGCTGTTATTATCCCACC 58 NA Nonspecific Mus musculus 50 Hoxa4 ENSMUSG00000000942 ENSMUST00000101395,ENSMUST00000070675 1 2 2 76 6 52140665 52140683 CTCCAGTTATAACGGAGGC 59 52140607 52140625 CCTTCTCCAGTTCCAAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Unc119 ENSMUSG00000002058 ENSMUST00000002127,ENSMUST00000100755 2 2 3 94 11 78161751 78162040 CGAGGAGCTAATCAGTGAG 59 78162097 78162116 CTTTGTTATGCATCACCAGC 59 NA Mus musculus 50 Peg3 ENSMUSG00000002265 ENSMUST00000051209,ENSMUST00000086313 2 2 2 60 7 6668772 6668790 CCATGGATTATGAGTCTCG 57 6665452 6665471 TTGAGTTCCACAACATTCTG 58 NA DesignNoJunction Mus musculus 50 Golga2 ENSMUSG00000002546 ENSMUST00000081670,ENSMUST00000113375 2 2 5 86 2 32147728 32152496 CAGAGAATAGCCATGATGCT 59 32152644 32152662 AAAGTTGTCGCAGACTCTC 59 NA Mus musculus 50 Hbp1 ENSMUSG00000002996 ENSMUST00000081639,ENSMUST00000019163 1 2 2 115 12 32625220 32625240 AATACTCACCGTGAAGATGAG 59 32622607 32625145 ATGTGTACAGGAGATGATCTG 59 NA Mus musculus 50 Ascc3l1 ENSMUSG00000003660 ENSMUST00000052695 2 1 2 94 2 127047518 127047536 TCTTAGAAGCTTTGGTGGC 59 127047594 127065849 ATAGTTGTGGAGGGTAGCA 59 NA Mus musculus 50 Mast2 ENSMUSG00000003810 ENSMUST00000003908,ENSMUST00000106484,ENSMUST00000106486,ENSMUST00000106485 3 4 5 80 4 116064229 116103018 CTGGCTTGAAGGAATTGAG 58 116025629 116025647 TGGAGGTTACAATCAAGCT 58 NA Mus musculus 50 Prkacb ENSMUSG00000005034 ENSMUST00000102515,ENSMUST00000005164,ENSMUST00000106140,ENSMUST00000106138,ENSMUST00000106137 2 5 5 80 3 146411008 146413462 GAATTGGAAGGTTCAGTGAG 58 146410947 146410965 CGAGGGAATGAAGGTACTC 59 NA Mus musculus 50 Scnm1 ENSMUSG00000005629 ENSMUST00000107226,ENSMUST00000005770 2 2 2 85 3 94937025 94937131 CATTTGTCCAGTCTGAAGC 58 94936958 94936976 TTCAATTCGTTCTGCTGTC 58 NA Mus musculus 50 Nr2c1 ENSMUSG00000005897 ENSMUST00000105290,ENSMUST00000092213,ENSMUST00000099343 2 3 3 86 10 93630397 93630416 TGGATTCAGGAATGTTTGTG 58 93630465 93633803 ACGATTCAGCCTTATCTGG 59 NA Mus musculus 50 Phyhd1 ENSMUSG00000007476 ENSMUST00000095078,ENSMUST00000113654 2 2 3 87 2 30112842 30117375 CAGCCAATAGGATTGAAGC 58 30117426 30117444 GACTGCAGTACATTGTTGC 59 NA DesignRelaxed Mus musculus 50 Tcfcp2 ENSMUSG00000009733 ENSMUST00000108921,ENSMUST00000100199 3 2 3 94 15 100358882 100358900 TTCAGTATGTGCTCTGTGC 59 100358365 100358826 TCGGATTTCATAAGACTGACC 59 NA Mus musculus 50 Tex14 ENSMUSG00000010342 ENSMUST00000060835,ENSMUST00000010486 3 2 4 81 11 87298298 87298316 ACTCCATGATGAGAAGGGT 59 87298361 87299762 GAACTCCACCATCTGAGTG 59 NA Mus musculus 50 Ebf3 ENSMUSG00000010476 ENSMUST00000106118,ENSMUST00000033378 1 2 2 80 7 144416944 144417448 GTGGAGTGAGCTGATAACC 59 144416882 144416900 AGGGTCACTTCAACAACTC 59 NA Mus musculus 50 Zfp296 ENSMUSG00000011267 ENSMUST00000108453,ENSMUST00000011411 2 2 3 168 7 20162963 20163169 GTTCTAAGTCTTCCGACCG 59 20163300 20164971 TCTTTGGATTCTGAGATGGG 59 NA Mus musculus 50 Brms1l ENSMUSG00000012076 ENSMUST00000059250 2 1 2 135 12 56961164 56962082 CATTACCTCAGAGCTGTGG 59 56962399 56962417 AAGAATGTCGAGATCCTGC 59 NA Mus musculus 50 Klra17 ENSMUSG00000014543 ENSMUST00000014687 2 1 2 86 6 129818758 129818778 GGATGGCGTAAATGTAAACAG 59 129815776 129818713 CTGAAGGAATTTCAGTTCATCC 59 NA Mus musculus 50 Chfr ENSMUSG00000014668 ENSMUST00000112519,ENSMUST00000014812 2 2 3 90 5 110572660 110572678 GAAGAATGAGCCAGAACAC 58 110573662 110573801 CTTATTGGCTTCAAGGGAG 57 NA Mus musculus 50 Lcorl ENSMUSG00000015882 ENSMUST00000016026,ENSMUST00000113981,ENSMUST00000087164 1 3 5 108 5 46127044 46127063 GGGATGGAGTGTTAGATCTC 58 46125710 46126973 TTTCTGTGTAGTCTCCCAG 58 NA Mus musculus 50 Odz1 ENSMUSG00000016150 ENSMUST00000115059,ENSMUST00000016294 2 2 4 81 X 40001579 40010642 GGAACTAAGAAACAGAGATACC 57 39995934 39995952 TGATTCAGACATAGGGTCC 58 NA Mus musculus 50 Kcnq2 ENSMUSG00000016346 ENSMUST00000049792,ENSMUST00000103048,ENSMUST00000103051,ENSMUST00000103050,ENSMUST00000103049 2 5 10 82 2 180821722 180821740 ACGTCATCGAACAGTACTC 59 180817146 180821676 CACAATCTGGTCCACTCTG 59 NA Mus musculus 50 Ctsa ENSMUSG00000017760 ENSMUST00000017904,ENSMUST00000103093,ENSMUST00000103092,ENSMUST00000109323,ENSMUST00000109319,ENSMUST00000109318 1 6 7 108 2 164659611 164659630 GATGAAATCGATTGTCTCCC 58 164659701 164659830 ACTCCACAAACCAGTAGTG 59 NA Mus musculus 50 Myo1c ENSMUSG00000017774 ENSMUST00000102505,ENSMUST00000069057,ENSMUST00000102504,ENSMUST00000108431,ENSMUST00000057572 2 5 6 80 11 75482707 75482725 ATCTTCATCCGATTTCCCA 58 75482769 75483293 GATCTTGGTGGCTAGACTC 59 NA Mus musculus 50 Mybl2 ENSMUSG00000017861 ENSMUST00000109429 2 1 2 142 2 162901386 162901404 GAACAAACAGGATACCCTG 57 162901507 162901671 GTTTCTGAGATACAGAAGATGG 58 NA Mus musculus 50 Mafk ENSMUSG00000018143 ENSMUST00000018287,ENSMUST00000110836 3 2 2 162 5 140275165 140276050 CATTGAAGGTCAAGAAGGAG 58 140276175 140276193 TAGCCTCTGTTCTTGAGTG 58 NA DesignRelaxed Mus musculus 50 Smurf2 ENSMUSG00000018363 ENSMUST00000100310,ENSMUST00000092517,ENSMUST00000103067 2 3 3 80 11 106689863 106689883 CAGAAGGGCTTTAATGAAGTC 58 106686110 106689822 TCCACAAATAATGAGCTCCA 59 NA Mus musculus 50 Mpdu1 ENSMUSG00000018761 ENSMUST00000094073,ENSMUST00000018905 2 2 3 156 11 69470821 69470931 TTCTGTTCAGGAAACTGGAG 59 69470684 69470702 GTTCTAGAAGCGAGCTCAG 59 NA Mus musculus 50 Unc45b ENSMUSG00000018845 ENSMUST00000108160,ENSMUST00000018989 3 2 2 80 11 82751284 82751303 ATGTTTGAGAACCATGACCA 59 82751344 82753699 CTCCTGAACCTCCTTATTGAG 59 NA Mus musculus 50 Slc6a8 ENSMUSG00000019558 ENSMUST00000114467,ENSMUST00000114465,ENSMUST00000033752 3 3 4 97 X 70921097 70921995 CCCTATTCAAAGGTCTGGG 59 70922056 70922074 GACCAGGTAATAGAAGCCC 59 NA Mus musculus 50 Slc1a4 ENSMUSG00000020142 ENSMUST00000109594,ENSMUST00000004634 1 2 2 81 11 20206595 20207904 TCACCATTCTAGTGACTGC 58 20206532 20206550 ATGATGGCAATTGTGAGGA 59 NA Mus musculus 50 Ndufs7 ENSMUSG00000020153 ENSMUST00000105364,ENSMUST00000020361 2 2 2 105 10 79718691 79718709 TACCACTACTCCTACTCGG 59 79719401 79719419 AGATGCCATAAAGGAGTGC 59 NA DesignNoJunction Mus musculus 50 Ptprb ENSMUSG00000020154 ENSMUST00000092167 1 1 2 80 10 115809965 115809983 ACTCCGTGGACATTTATGG 59 115810027 115817900 ACACATATTGACACTCGGT 58 NA Mus musculus 50 Pttg1 ENSMUSG00000020415 ENSMUST00000101340,ENSMUST00000020687 1 2 3 85 11 43233906 43234622 ATCATGGGAATCTGATCCG 58 43233839 43233857 CTGCATCGTAACAAACAGG 59 NA Mus musculus 50 OTTMUSG00000001265 ENSMUSG00000020486 ENSMUST00000084575,ENSMUST00000107962,ENSMUST00000100656,ENSMUST00000107960,ENSMUST00000018544,ENSMUST00000063156,ENSMUST00000096206 1 7 9 81 11 87402706 87402727 CAAGATCTATCAGTTCCCAGAC 59 87402769 87402978 GATGCTTTCCTTTAGGGCT 59 NA Nonspecific, InUTR Mus musculus 50 Arsg ENSMUSG00000020604 ENSMUST00000106697,ENSMUST00000020928,ENSMUST00000106696 1 3 3 98 11 109424574 109433538 TTCTACATCACTGGTGGAG 58 109433600 109433618 ATCAGCAGCATCTTCTAGG 58 NA Mus musculus 50 Stx8 ENSMUSG00000020903 ENSMUST00000021286,ENSMUST00000021285 3 2 3 92 11 67786751 67786770 GAACGTTGTTGAAGAATCTG 57 67786825 67798078 CCTCCAGTTGTGTTATCTG 57 NA Mus musculus 50 Zc3h14 ENSMUSG00000021012 ENSMUST00000066979,ENSMUST00000047981 3 2 6 103 12 99985724 99991000 CTTACGTAGATGAAGAACTTCC 58 99991064 99991082 GTTGTTCCCTAGAAACAGG 57 NA Mus musculus 50 Yy1 ENSMUSG00000021264 ENSMUST00000021692,ENSMUST00000084993 3 2 2 92 12 110044840 110051136 AGAATTTGCCAGAATGAAGC 59 110052817 110052835 CTGAACATCTTTGTGCAGC 59 NA Mus musculus 50 Rasa1 ENSMUSG00000021549 ENSMUST00000109552,ENSMUST00000022034 2 2 2 80 13 85365220 85366148 AGTATGGAAGATGAAGCCAC 59 85365159 85365180 AGTAGCTTTCATATACTGCTCC 59 NA Mus musculus 50 Nsun2 ENSMUSG00000021595 ENSMUST00000109700,ENSMUST00000109699,ENSMUST00000022087 2 3 3 80 13 69751857 69751875 TTAAGGAGTTGGAGGACCT 59 69751918 69754306 CAAGTTCTTCAGGGTACCAG 59 NA Mus musculus 50 N6amt2 ENSMUSG00000021951 ENSMUST00000022518 3 1 1 97 14 58169223 58169241 ACGATCCAGTTTCTGACTC 59 58168662 58168680 AACTTGCACATCTTCACAC 58 NA DesignNoJunction Mus musculus 50 Bnip3l ENSMUSG00000022051 ENSMUST00000022634 3 1 2 124 14 67608065 67608083 TAAGCATGAGGAAGAGTGG 58 67606600 67607977 TCCAATATAGATGCCGAGC 58 NA Nonspecific Mus musculus 50 Cyp2d26 ENSMUSG00000022445 ENSMUST00000006094 2 1 1 60 15 82621772 82621790 CTCATGATCCTGCATCCAG 59 82621555 82621574 CTATGACCTCGTCGATTTCC 59 NA DesignNoJunction Mus musculus 50 1500032L24Rik ENSMUSG00000022452 ENSMUST00000023086 1 1 1 128 15 82178372 82178390 TTTCTCTATGTCGGGACAC 58 82179284 82179302 ATCAGTGCTTTCTCCTGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Prss7 ENSMUSG00000022857 ENSMUST00000023566,ENSMUST00000060402 3 2 2 117 16 79076021 79076040 AGTCCCTGTAACAACTTCAG 59 79062497 79071648 CTCTATTGAGACATGGCCTG 59 NA Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000113989 1 1 16 101 16 91793920 91793939 TCAAACTGAAGCTACAAGGA 58 91794003 91828114 CTGAGATTCCAAATGCTGG 58 NA Mus musculus 50 Scn8a ENSMUSG00000023033 ENSMUST00000082209,ENSMUST00000108910,ENSMUST00000108908 1 3 6 85 15 100848948 100854703 TTGTGGCTGTCTCTTTAGTC 59 100854751 100854769 TCTTAGGGTCCTAAGGGAC 59 NA Mus musculus 50 Grm8 ENSMUSG00000024211 ENSMUST00000115323,ENSMUST00000115324,ENSMUST00000090512 1 3 3 80 6 27712415 27712433 AATTATCAAACGCCTGCTG 58 27711352 27712373 AATATCCTCCTGATGTCATCC 58 NA Mus musculus 50 Dtna ENSMUSG00000024302 ENSMUST00000115834,ENSMUST00000115833,ENSMUST00000115832,ENSMUST00000025156,ENSMUST00000075123,ENSMUST00000047954 1 6 7 87 18 23704257 23728070 GAAATGCAATTTGCACCTG 58 23728121 23728139 TTCTATGTTTGGGTCCAGG 58 NA Mus musculus 50 Sf1 ENSMUSG00000024949 ENSMUST00000113489,ENSMUST00000113487,ENSMUST00000113485,ENSMUST00000076351 1 4 4 83 19 6365718 6365736 AGAAGACAGTGATTCCAGG 58 6365781 6368372 GTAGTTGCACTATGTAAGCTC 58 NA Nonspecific Mus musculus 50 Pde6c ENSMUSG00000024992 ENSMUST00000025956 1 1 2 114 19 38252605 38252623 AAATACGTAACCTCCGACC 59 38252803 38254505 GAAGTGCTACCTGACTCTG 59 NA Mus musculus 50 Aspscr1 ENSMUSG00000025142 ENSMUST00000106160 3 1 5 181 11 120535115 120535372 AGTACTAGAAGACACATGCC 58 120538931 120539743 CGATGCGAACTATGTTCTC 58 NA Mus musculus 50 Cyp2e1 ENSMUSG00000025479 ENSMUST00000106053 2 1 3 81 7 147949828 147959056 TATAGAAGTTGGAACCTGCC 59 147959100 147959541 TTACAACTGTACCCTTGGG 58 NA Mus musculus 50 Dach2 ENSMUSG00000025592 ENSMUST00000113380,ENSMUST00000113379,ENSMUST00000067219,ENSMUST00000113381 3 4 6 108 X 110566097 110669866 TGTTAACAGTTCAAGGCCT 59 110669938 110669956 CAGTCCTGGTGATAAGAGG 58 NA Mus musculus 50 Pdgfa ENSMUSG00000025856 ENSMUST00000110897,ENSMUST00000110896,ENSMUST00000076095 1 3 4 82 5 139455152 139455170 GTTAGAGGAACACCTGGAG 58 139453170 139455106 CTCACCTCACATCTGTCTC 59 NA Mus musculus 50 Rp1h ENSMUSG00000025900 ENSMUST00000027032,ENSMUST00000115540 2 2 2 88 1 4342318 4342336 ACACAGGTTATGCAGTGTC 59 4342128 4342146 CCAGAGCTGAGTATCACTG 59 NA DesignNoJunction Mus musculus 50 Col9a1 ENSMUSG00000026147 ENSMUST00000054588,ENSMUST00000088349,ENSMUST00000115252 3 3 4 98 1 24246147 24246165 GAGAATGGTTTCCCTGGTC 59 24246227 24251207 TCCCAAGTCTCCTTTAGGT 59 NA Mus musculus 50 Ilkap ENSMUSG00000026309 ENSMUST00000027534 1 1 2 135 1 93275067 93275085 CTGTGCCTGATATCAGACG 59 93272649 93272902 ATCTTGTCATCCTCAAGGC 59 NA Mus musculus 50 Lgtn ENSMUSG00000026427 ENSMUST00000086578 2 1 4 126 1 133067680 133079354 TACTGCTTGGTGAGAACAC 59 133079443 133079462 CAGATCGAATCATGTGATGC 59 NA Mus musculus 50 Esrrg ENSMUSG00000026610 ENSMUST00000110939,ENSMUST00000027906,ENSMUST00000110938 1 3 3 80 1 189974210 190022463 CATATTCCAGGCTTCTCCA 58 190022506 190022525 GAGGATCAGAATCTCCATCC 59 NA Mus musculus 50 Mosc1 ENSMUSG00000026621 ENSMUST00000110992 1 1 2 103 1 186625909 186627104 ATAATGAAGTGGCCTACTCAG 59 186625826 186625844 GTTTGTCGCTTTCACTCTG 59 NA Mus musculus 50 Suv39h2 ENSMUSG00000026646 ENSMUST00000027956,ENSMUST00000100458 2 2 4 80 2 3379892 3381549 ATGTTGGAGAGGTGATCAC 58 3379830 3379848 CAAAGAGGTAGGTGATCCC 59 NA Mus musculus 50 Gapvd1 ENSMUSG00000026867 ENSMUST00000113103,ENSMUST00000113101 2 2 7 93 2 34551121 34556294 CTATGCCTAAAGATGAGCCC 59 34551047 34551065 GTCCGTTTAATGGCATTCC 59 NA Mus musculus 50 Mfap1b ENSMUSG00000027238 ENSMUST00000110593,ENSMUST00000077436,ENSMUST00000110592,ENSMUST00000110591,ENSMUST00000110590 3 5 5 97 2 121399400 121402072 CCTATATCCTTCAAGCGGAG 59 121399322 121399341 TTTCTCTGAATGTTTCGGGA 59 NA Mus musculus 50 Spef1 ENSMUSG00000027329 ENSMUST00000028801,ENSMUST00000110218 2 2 2 163 2 131000323 131000341 CAGACCCAAGAGAAACCTC 59 130998505 130998939 TCAGCACCTTTCTGTTCAG 59 NA Mus musculus 50 Polr3f ENSMUSG00000027427 ENSMUST00000028914,ENSMUST00000110017 1 2 2 80 2 144354544 144358095 ACTGTTATCCATGGGTCAG 58 144358139 144358157 CCAGCATTCTGAGAATCCT 59 NA Mus musculus 50 Hadh ENSMUSG00000027984 ENSMUST00000029610 1 1 1 60 3 130948081 130948099 GCCTATGATGAAGCTTGTG 58 130945485 130945503 TTCAAATGTCTTCTGGCTG 57 NA DesignNoJunction Mus musculus 50 Trim2 ENSMUSG00000027993 ENSMUST00000107692,ENSMUST00000107691,ENSMUST00000107695,ENSMUST00000107693,ENSMUST00000107694,ENSMUST00000065380,ENSMUST00000054990 3 7 7 103 3 83994504 83994522 CAGAAGGCTGTGAAGAGAC 59 83982085 83994438 TTTCTTCCTTTGGTACCGAC 59 NA Mus musculus 50 Fktn ENSMUSG00000028414 ENSMUST00000107638,ENSMUST00000061771 1 2 3 94 4 53744194 53747726 TGTGGAAGAATGAGGATGG 58 53747784 53747802 TATTCCATCTAGCCGAGGA 59 NA Mus musculus 50 Sh3gl2 ENSMUSG00000028488 ENSMUST00000107189 1 1 4 159 4 85025268 85025286 CTAAAGAAATCGCCGAGTC 58 85027403 85282713 CAGGGAACTCTTTCTTCCA 58 NA Mus musculus 50 Dock7 ENSMUSG00000028556 ENSMUST00000107015,ENSMUST00000030286,ENSMUST00000075836,ENSMUST00000030282,ENSMUST00000097962 1 5 5 94 4 98670596 98674631 GCCAAATAGTTAATCTAGGGC 58 98670522 98670540 ATGCTGGTCATGATTTCCT 58 NA Mus musculus 50 Ccdc23 ENSMUSG00000028643 ENSMUST00000030395,ENSMUST00000097908 3 2 3 88 4 118868548 118868567 TAAAGAACCAGCCTTCAGAG 59 118868617 118873511 GAGCATAGATCTCTGCTCTC 59 NA Mus musculus 50 Macf1 ENSMUSG00000028649 ENSMUST00000106224 2 1 12 85 4 123115772 123115790 GAGAAGGAGCTGATGATGG 59 123112428 123115723 TTCAGCATAAACTGCTGCT 59 NA Mus musculus 50 Rad54l ENSMUSG00000028702 ENSMUST00000102705,ENSMUST00000102704 3 2 2 84 4 115772347 115772886 GAAGCTGTGTAATCATCCAG 58 115772282 115772300 TGGGAAGATACCCAAAGTG 58 NA Mus musculus 50 Cyp4a31 ENSMUSG00000028712 ENSMUST00000030480,ENSMUST00000106538 3 2 2 124 4 115242835 115242853 TAGTTCACTCTCGTGTGAG 58 115242941 115243381 CTTGATCACTCCATCTGTG 57 NA Mus musculus 50 Rcc1 ENSMUSG00000028896 ENSMUST00000105951,ENSMUST00000030726,ENSMUST00000084250 3 3 3 110 4 131893722 131893740 AACTGCAAGAGAAAGTGGT 59 131891713 131893648 TCACACCATTATTGTCCCG 59 NA Mus musculus 50 Pftk1 ENSMUSG00000028926 ENSMUST00000115451,ENSMUST00000115452,ENSMUST00000030763,ENSMUST00000115450 1 4 5 80 5 5010884 5010902 GATGATCCAAGGAGTTGCT 59 4949585 5010843 GTTCCAAGAACCAGAAATATCC 59 NA Mus musculus 50 Hes3 ENSMUSG00000028946 ENSMUST00000030788 1 1 3 109 4 151661975 151662113 AAAGATCTCCAAGCCTCTG 58 151661804 151661903 GTTTCCGTATCTGATGTGAG 58 NA Mus musculus 50 Agbl5 ENSMUSG00000029165 ENSMUST00000114700,ENSMUST00000031057 2 2 6 75 5 31205567 31207079 CACTCAGCTTATCAGGGAG 59 31207118 31207136 TTCCCAATCACCATGACAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Acad10 ENSMUSG00000029456 ENSMUST00000031412,ENSMUST00000111770 1 2 2 85 5 122082661 122084693 TCTGAGAGGGTTCAGAGAC 59 122082594 122082615 CCATGTTAAGACAGTACATCCT 59 NA Mus musculus 50 Ncor2 ENSMUSG00000029478 ENSMUST00000111398,ENSMUST00000111402,ENSMUST00000111401,ENSMUST00000111393,ENSMUST00000086083,ENSMUST00000055256 1 6 8 135 5 125590439 125599001 GAAGACCTTACCAAGGACC 59 125590322 125590340 GGTCCATGTTCTGGATCAG 59 NA Mus musculus 50 Zfml ENSMUSG00000030016 ENSMUST00000113834 1 1 5 80 6 83926338 83933979 GAACTTGGTATTGATGACGC 59 83934021 83934040 GCCTACAGAAGAGTCTTGAG 59 NA Mus musculus 50 8430419L09Rik ENSMUSG00000030207 ENSMUST00000111916,ENSMUST00000111915,ENSMUST00000087740,ENSMUST00000111914 3 4 4 86 6 135175803 135176875 TCGATGTTTACAGTGATGGAG 59 135176923 135176941 GTCGGGTTGTAATCAGGAG 59 NA Mus musculus 50 Mef2a ENSMUSG00000030557 ENSMUST00000107476,ENSMUST00000072460 3 2 4 88 7 74440322 74440340 CTGACATGGACAAAGTCCT 59 74413278 74440273 TCTTAACGTCTCAACGATATCC 59 NA Mus musculus 50 Ccdc90b ENSMUSG00000030613 ENSMUST00000032842 3 1 2 80 7 99717020 99717040 CTAAGTACGCTATCAAACGTC 58 99717082 99721063 TTGGACTGTTATTTCCTGC 57 NA Mus musculus 50 Cask ENSMUSG00000031012 ENSMUST00000116623,ENSMUST00000115438,ENSMUST00000115432 3 3 9 150 X 13128102 13129510 AATTCTGTTTCGGACTTGC 58 13126385 13126404 TAATCTGGATGATGTCACCA 58 NA Mus musculus 50 Rpgr ENSMUSG00000031174 ENSMUST00000072393,ENSMUST00000115539,ENSMUST00000115534,ENSMUST00000044598,ENSMUST00000073392,ENSMUST00000115533,ENSMUST00000115536,ENSMUST00000115532,ENSMUST00000115531 3 9 13 80 X 9776155 9779148 GCTTTGATGACAGAACTAGG 58 9776094 9776113 GAAATTCTCCATCCCAAGTC 58 NA Mus musculus 50 Atrx ENSMUSG00000031229 ENSMUST00000113573,ENSMUST00000113574,ENSMUST00000033580 2 3 5 80 X 103013419 103013439 GAGCCAGACTTACTAGATGAC 59 102999261 103013379 AAGTATGGTATCCTTTGGCAG 59 NA Mus musculus 50 Srpx2 ENSMUSG00000031253 ENSMUST00000113303,ENSMUST00000113304,ENSMUST00000033606 3 3 3 80 X 130460515 130460788 ATGTGTAGACATAGATCCACC 58 130460830 130460848 CGAGCAGTTAGTTTCTCTG 57 NA Mus musculus 50 Acsl4 ENSMUSG00000031278 ENSMUST00000033634,ENSMUST00000112904,ENSMUST00000112903,ENSMUST00000112907 2 4 4 80 X 138768260 138768279 TACACTACTGGAAGAGTTGG 58 138766913 138768218 AACTGTATAACCACCTTCCT 57 NA Mus musculus 50 Cdkl5 ENSMUSG00000031292 ENSMUST00000087104,ENSMUST00000112355,ENSMUST00000112356 1 3 3 64 X 157249529 157249547 CTCAGATCTACAGACCCAG 58 157246578 157246596 ATGAAGACAGATGCAACAG 57 NA DesignNoJunction Mus musculus 50 Rbbp7 ENSMUSG00000031353 ENSMUST00000112327,ENSMUST00000033720,ENSMUST00000112326,ENSMUST00000112321 3 4 4 80 X 159199636 159206787 TTCCTGAAGTGACTAAACCA 58 159206828 159206848 TCTGCTCATCAGATGTATGAG 59 NA Mus musculus 50 Irak1 ENSMUSG00000031392 ENSMUST00000114352,ENSMUST00000068286,ENSMUST00000114360,ENSMUST00000114714,ENSMUST00000114347,ENSMUST00000114344,ENSMUST00000114339,ENSMUST00000114334,ENSMUST00000033769,ENSMUST00000114354,ENSMUST00000114353,ENSMUST00000073369,ENSMUST00000101458 3 13 13 95 X 71266350 71266368 ACGACTGGACATTCTTCTG 59 71265866 71266294 ACGTTAGAACTCTTGATGTCTC 59 NA InUTR Mus musculus 50 Mre11a ENSMUSG00000031928 ENSMUST00000034405 2 1 2 85 9 14614253 14614271 AGAAATGCTTGACAGTGCT 59 14614320 14616283 TATAGTCCACCCGTAGTCG 59 NA Mus musculus 50 Birc3 ENSMUSG00000032000 ENSMUST00000013949,ENSMUST00000115674,ENSMUST00000115673,ENSMUST00000115672 1 4 4 81 9 7860510 7860528 CTAACTGGCCTTCTAGTGC 59 7860347 7860465 ACATCATCACTGTGTCCTG 59 NA Mus musculus 50 D730048I06Rik ENSMUSG00000032108 ENSMUST00000098903 2 1 2 73 9 35597223 35597241 GGTGAAACGTGTATGATCC 58 35585664 35585683 TTTCTCTTGTTCCTCTTCAG 57 NA DesignNoJunction Mus musculus 50 Dyx1c1 ENSMUSG00000032210 ENSMUST00000098567,ENSMUST00000034734 2 2 2 81 9 72816920 72816939 ATTGTATTTGAATCGGGCTG 58 72816981 72819788 CTCTAGTGCCTTAGAAGAGTC 59 NA Mus musculus 50 Bckdhb ENSMUSG00000032263 ENSMUST00000116537,ENSMUST00000034801 2 2 3 95 9 83882430 83882448 GGATTTGGCATTGGAATCG 59 83882505 83882756 GTTGACAATCTGATCAAAGGC 59 NA Mus musculus 50 Trf ENSMUSG00000032554 ENSMUST00000112645,ENSMUST00000035158 3 2 2 82 9 103112998 103114150 AGCCAGGAGACTTTATTTGG 59 103112935 103112953 CTGAACAGAAGGTCCTTGG 59 NA Mus musculus 50 Lrig2 ENSMUSG00000032913 ENSMUST00000046316 3 1 2 81 3 104295471 104295623 TCTCCAGTTCTTGGAACTG 58 104295408 104295426 TGAGCGTAAAGAATCAAGC 58 NA Mus musculus 50 Podxl2 ENSMUSG00000033152 ENSMUST00000089447,ENSMUST00000061262,ENSMUST00000038409 1 3 3 81 6 88798796 88799200 GACTCTACTCAGGTGATCTG 58 88798734 88798755 CTATGTTCTCTGTCATGTTCAG 58 NA Mus musculus 50 1700124K17Rik ENSMUSG00000033237 ENSMUST00000109234 3 1 4 102 15 96180467 96180485 GATGATGAGGTACCACCAG 59 96180550 96182267 CAGTATCTCTTCCTGACACG 59 NA Mus musculus 50 Ptprm ENSMUSG00000033278 ENSMUST00000112708,ENSMUST00000035874,ENSMUST00000037974 1 3 4 80 17 67042849 67042867 TGGTGGACATCTACAACTG 58 67039899 67042805 TAAAGACGTACTGCTCCTC 58 NA Mus musculus 50 Crlf2 ENSMUSG00000033467 ENSMUST00000112549,ENSMUST00000044579 2 2 2 93 5 109984302 109984320 TCTTTGAGAAGCATCACGG 59 109984025 109984043 ATGAGGTCATCTTCCTCCT 59 NA DesignNoJunction Mus musculus 50 Acsm1 ENSMUSG00000033533 ENSMUST00000047929 3 1 2 110 7 126798999 126799502 TTTGACTTGCAGATCATCG 58 126799576 126799594 ATATTCCATGAAGAGGCCT 57 NA Mus musculus 50 Fuk ENSMUSG00000033703 ENSMUST00000093136 1 1 3 169 8 113415962 113415980 CAGATTGTTCACTCCCAGG 59 113413184 113414221 CAGTCTTTGCTCACAAAGC 59 NA Mus musculus 50 Phka1 ENSMUSG00000034055 ENSMUST00000052012,ENSMUST00000113611 3 2 3 89 X 99752607 99754917 TTCAACAAGTAATGCTCGC 58 99752536 99752554 GGAGCTAGTTTAGGATGGG 58 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111698,ENSMUST00000111690,ENSMUST00000099941,ENSMUST00000111693,ENSMUST00000111692,ENSMUST00000111688,ENSMUST00000111686,ENSMUST00000111691,ENSMUST00000111697,ENSMUST00000067232,ENSMUST00000066177,ENSMUST00000036811 2 12 23 81 2 84443860 84443878 AGACCACAACAGAACACTG 59 84443052 84443815 AATCTTCTGCATCAAGGGT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Vav1 ENSMUSG00000034116 ENSMUST00000112870 1 1 4 80 17 57448897 57454676 TGCATCTCTGGTATAACGTG 59 57454719 57454737 CCTTCTTCTCTGTGATCCG 59 NA Mus musculus 50 Mad2l1bp ENSMUSG00000034509 ENSMUST00000037890 2 1 1 65 17 46289750 46289768 CCTATGAACAGCTGAAGCA 59 46285209 46285227 CTTTCTTCCTTGCTGTGTC 58 NA DesignNoJunction Mus musculus 50 Rnps1 ENSMUSG00000034681 ENSMUST00000115371,ENSMUST00000088512 3 2 3 101 17 24558789 24559107 TGACCAAGGATCATATCATGG 59 24559170 24559188 CATAGCCTTTGGAGAGGTG 59 NA Nonspecific Mus musculus 50 Bai1 ENSMUSG00000034730 ENSMUST00000042035,ENSMUST00000089710 3 2 3 81 15 74374065 74374083 ATGTCCTGAGGAACATGAC 58 74374128 74374720 ATCTGGACAAAGTTCTGCA 59 NA Mus musculus 50 Ccl5 ENSMUSG00000035042 ENSMUST00000035938 1 1 1 91 11 83342680 83342698 TATTTCTACACCAGCAGCA 58 83339516 83339534 CACTTCTTCTCTGGGTTGG 59 NA DesignNoJunction Mus musculus 50 Eef2k ENSMUSG00000035064 ENSMUST00000047875,ENSMUST00000106489,ENSMUST00000106488 1 3 5 84 7 128043053 128046809 AAGATCAGGAGATTTGTACACC 59 128046853 128046872 CTTCTCGTAGTACTGGTTGG 59 NA Mus musculus 50 Pcyt1b ENSMUSG00000035246 ENSMUST00000113933,ENSMUST00000045898 3 2 2 83 X 90965529 90965547 GGCTCACGATGATATTCCA 59 90965594 90977031 GTTGGAACAAACATGCCTG 59 NA Mus musculus 50 Tpbg ENSMUSG00000035274 ENSMUST00000006559,ENSMUST00000098500 2 2 2 61 9 85738752 85738770 AGTGGATGCATAACATCAG 57 85738792 85738813 GTATCTGTAATGATACCCTTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 6530402F18Rik ENSMUSG00000035513 ENSMUST00000071201,ENSMUST00000113833 2 2 6 96 2 29062998 29063016 AGGTGCAAGAAGAACTTCC 59 29059830 29062941 CCATGTTTAAATGAGATGAGGC 59 NA Mus musculus 50 Gnptg ENSMUSG00000035521 ENSMUST00000038973 2 1 2 117 17 25372203 25372303 CCACTCTTTGTTAGTGTATCC 58 25372036 25372055 CCTTAGCAACTTCTCATAGC 58 NA Mus musculus 50 Bbs10 ENSMUSG00000035759 ENSMUST00000040454 1 1 1 60 10 110737061 110737080 AGTGGTGGAGTGTTTATCAG 59 110737103 110737121 AGAAAGACCAGTGATCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tm6sf2 ENSMUSG00000036151 ENSMUST00000110160 1 1 2 130 8 72601294 72601312 TACAGTTCAGAGATGAGGC 58 72601406 72601790 TCTTCCTGTACCATGTCAG 58 NA Mus musculus 50 6720456H20Rik ENSMUSG00000036339 ENSMUST00000111732,ENSMUST00000111735,ENSMUST00000037990 3 3 3 80 14 49125028 49125046 TGTATTCAACCCAGAGGAG 58 49125087 49126829 GATGGACCAAATCTTTCATAGG 58 NA Mus musculus 50 Exoc1 ENSMUSG00000036435 ENSMUST00000113493,ENSMUST00000087133 2 2 3 90 5 76983219 76986851 GCAAGAAGTTTGCTACACTG 59 76988044 76988062 GATCCAGTGAGTTTCCCAG 59 NA Mus musculus 50 Hspb6 ENSMUSG00000036854 ENSMUST00000098573,ENSMUST00000044048 3 2 2 90 7 31339341 31339360 GAAATCTCTGTCAAGGTGGT 59 31339497 31339515 ACTCTCGAGCAATGAATCC 59 NA DesignNoJunction Mus musculus 50 Zscan21 ENSMUSG00000037017 ENSMUST00000110961,ENSMUST00000110960,ENSMUST00000080732,ENSMUST00000062350,ENSMUST00000110959 2 5 5 77 5 138567849 138567868 TACTCAGGATCCAAGAAAGC 59 138574300 138574318 GAACTTCTGTGCTCATCTG 58 NA DesignNoJunction Mus musculus 50 Enpp1 ENSMUSG00000037370 ENSMUST00000105520 1 1 2 116 10 24371198 24372655 TGACCACAGAAGATGATGAC 59 24371101 24371119 TGTATCCGGTCAAGAACTG 58 NA Mus musculus 50 Lphn3 ENSMUSG00000037605 ENSMUST00000072521,ENSMUST00000036068,ENSMUST00000113424 1 3 4 80 5 81894258 81894277 CTGATGTATTTCCAGACCCA 59 81894318 81938757 GTTCCACTTTATAAGGGACAC 58 NA Mus musculus 50 Slc24a2 ENSMUSG00000037996 ENSMUST00000107158 1 1 5 116 4 86722052 86822074 ATGGAAGAGTCACCTACAG 57 86719132 86719151 GATGCTATTCCTCATGAGAC 57 NA Mus musculus 50 BC057079 ENSMUSG00000038368 ENSMUST00000097992,ENSMUST00000084432,ENSMUST00000107148,ENSMUST00000107147 2 4 4 81 4 88049242 88049263 TAGAACTGATGGGTTATGTGAG 59 88049305 88053027 AAGTCCAAAGCCTCTTCAG 59 NA Mus musculus 50 AI481877 ENSMUSG00000038598 ENSMUST00000107547,ENSMUST00000107548,ENSMUST00000095066 3 3 3 80 4 59112170 59112191 CTACGTAGACGACTTTATTCCT 59 59107143 59112130 TCAATAAGCAATCCTTGGTG 58 NA Mus musculus 50 Prc1 ENSMUSG00000038943 ENSMUST00000047549 1 1 2 81 7 87456055 87457110 AAAGTACGCAAGATGAACAC 58 87457154 87457172 ACACTGATCCACCAAAGAC 59 NA Mus musculus 50 F13a1 ENSMUSG00000039109 ENSMUST00000095869,ENSMUST00000099580 2 2 3 87 13 37063871 37063890 TCCTGAATGACATTGGAGTG 59 37063683 37063819 CTTGGAGTCTCAGATCCTG 58 NA Mus musculus 50 Stau1 ENSMUSG00000039536 ENSMUST00000109235,ENSMUST00000109238,ENSMUST00000109236,ENSMUST00000088055,ENSMUST00000049412 1 5 5 80 2 166785614 166788940 GAAAGGTTGGAGGTAAATGG 58 166785553 166785571 CGCAATTTCAAACACTTGG 58 NA Mus musculus 50 Rapgef1 ENSMUSG00000039844 ENSMUST00000095087,ENSMUST00000091146 2 2 4 128 2 29565714 29565732 TGTCCAGCAAACTAAAGTG 57 29565824 29575126 AACACAGATTTGTACGAGG 57 NA Mus musculus 50 Cited2 ENSMUSG00000039910 ENSMUST00000038107,ENSMUST00000105529 2 2 2 60 10 17444402 17444420 AGACACTGATTTCATCGAC 57 17444442 17444462 GTCCAAACCCATTTCTATCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mrap ENSMUSG00000039956 ENSMUST00000038197 1 1 1 73 16 90747828 90747846 ATCCTGCTCTACATGTCCT 59 90749490 90749508 CATGAACATATTGGCTGGG 58 NA DesignNoJunction Mus musculus 50 Daam2 ENSMUSG00000040260 ENSMUST00000057610,ENSMUST00000086917 2 2 2 80 17 49619935 49620063 AGAAGTTTCGGAAAGAACAC 58 49619874 49619892 TCTCCAGTGTCTTTGTCTC 58 NA Mus musculus 50 1810074P20Rik ENSMUSG00000040359 ENSMUST00000102994 3 1 2 97 4 25207835 25207853 TAGTCCATACACTTGACGG 58 25206508 25207774 AATGTTTACTCGACCACCT 58 NA Mus musculus 50 Zmiz2 ENSMUSG00000041164 ENSMUST00000109787,ENSMUST00000012612,ENSMUST00000109786,ENSMUST00000109789,ENSMUST00000093347,ENSMUST00000102914,ENSMUST00000109785 2 7 7 88 11 6302868 6303134 ATTCAGAACTCAGACTACGA 57 6303185 6303203 TCCTTGATGTGTAGGTCAG 58 NA Mus musculus 50 Sox5 ENSMUSG00000041540 ENSMUST00000038815,ENSMUST00000077160 3 2 4 193 6 144065167 144103522 ACAACACAATGGAAGTCGA 59 144064992 144065010 CATCTTCCTCTGCTTCAGG 59 NA Mus musculus 50 Mbp ENSMUSG00000041607 ENSMUST00000062446,ENSMUST00000114674,ENSMUST00000114673,ENSMUST00000080658 3 4 10 103 18 82731236 82742223 CACATGTACAAGGACTCAC 57 82742290 82742308 AAGAAATGGACTACTGGGT 57 NA Mus musculus 50 Reln ENSMUSG00000042453 ENSMUST00000062372 1 1 3 80 5 21391383 21401814 GTCGTCCTAGTAAGCACTC 59 21391321 21391339 TCTGTTGTAGAAGTGCCTG 59 NA Mus musculus 50 Tnp2 ENSMUSG00000043050 ENSMUST00000051297 2 1 1 75 16 10788425 10788443 CAGGAAGACCTTTGAAGGG 59 10788368 10788386 CCTCTTAGCTCTGTGAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cdkn2a ENSMUSG00000044303 ENSMUST00000030237,ENSMUST00000060501,ENSMUST00000107131 3 3 3 206 4 88922649 88922667 GACATCGTGCGATATTTGC 59 88920591 88920609 CATCGCTAGAAGTGAAGCT 59 NA DesignNoJunction, InUTR Mus musculus 50 Tceal3 ENSMUSG00000044550 ENSMUST00000113100 2 1 2 272 X 133201600 133201618 CAGGTACACAGTCTCTGTG 59 133202174 133202192 TTTCTTGTCTGGCTTCTCG 59 NA DesignNoJunction, InUTR Mus musculus 50 Palb2 ENSMUSG00000044702 ENSMUST00000106469 2 1 4 185 7 129271807 129271825 TACATACACCAAGAGCAGG 58 129268430 129271659 GTAACTCAAAGTCAAGGAGC 58 NA Mus musculus 50 4632412N22Rik ENSMUSG00000045761 ENSMUST00000097284,ENSMUST00000112615 3 2 4 120 17 72034524 72036935 TCACTCTAGCCAAAGTTCC 58 72037019 72037037 TCATCGTGAGCAAGAAGAC 59 NA Mus musculus 50 Vps13a ENSMUSG00000046230 ENSMUST00000068156,ENSMUST00000112873 1 2 3 80 19 16785423 16789549 TACTGAAGATGACTCAGAGG 57 16785362 16785381 TCTCTACATGACACTTGAGG 58 NA Mus musculus 50 Vps13a ENSMUSG00000046230 ENSMUST00000068156 2 1 3 120 19 16695192 16710270 CAAATGTTACAGGTCATGGA 57 16693969 16693987 CCTTTGTTACGAACAACAC 57 NA Mus musculus 50 Zfp322a ENSMUSG00000046351 ENSMUST00000110440,ENSMUST00000050101 3 2 3 134 13 23460019 23460039 ATTAGAGACCTTGTGGATCTG 58 23449572 23454679 TACCTCCAAACCGATAGTG 58 NA InUTR Mus musculus 50 Abpz ENSMUSG00000046438 ENSMUST00000055444 3 1 1 70 7 34523490 34523508 CTGCTACAAAGAACAAGGA 57 34522443 34522461 GGGTGACAAGTATAGAGGC 59 NA DesignNoJunction Mus musculus 50 Phf13 ENSMUSG00000047777 ENSMUST00000055688 3 1 1 64 4 151366184 151366202 ATGAAGACATCATGGTGGA 58 151365848 151365866 CTTCATGCAGAAACAGGTG 59 NA DesignNoJunction Mus musculus 50 EG624219 ENSMUSG00000047822 ENSMUST00000058777 3 1 1 60 9 21640504 21641290 GAATTTGAGACCTTAAAGGCTC 59 21641311 21641329 CAGTGAGAGCCCATAAGAG 59 NA DesignRelaxed Mus musculus 50 Ripply2 ENSMUSG00000047897 ENSMUST00000058846 1 1 1 60 9 86911146 86911164 TTTGCAATACCAACACCCT 59 86914503 86914524 TAAGTAGTCGTAACACTTGGAC 59 NA DesignNoJunction Mus musculus 50 1810044A24Rik ENSMUSG00000047921 ENSMUST00000089770,ENSMUST00000023276 3 2 3 80 15 72755987 72756005 TTCACCATCAACATCAAGG 57 72734101 72755943 GCTGATTCCATCATCACTC 57 NA Mus musculus 50 Olfr1093 ENSMUSG00000047969 ENSMUST00000055273 3 1 1 60 2 86625910 86625929 GTGGATGTCCACAATATTCC 58 86625949 86625970 CTAAGAGAATAAACATGGTGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 H2-M10.4 ENSMUSG00000048231 ENSMUST00000057502 2 1 1 100 17 36598444 36598698 GAAGAATGACTATCACACCCT 59 36598364 36598383 CATAGCCATAGTAGGTGAGC 59 NA Mus musculus 50 Bdnf ENSMUSG00000048482 ENSMUST00000111044,ENSMUST00000111042 3 2 11 106 2 109549809 109563547 TGTCGTAAAGTTCCACCAG 59 109563616 109563635 CGTTTACTTCTTTCATGGGC 59 NA InUTR Mus musculus 50 Tob2 ENSMUSG00000048546 ENSMUST00000050467 3 1 1 60 15 81681660 81681678 CATCACCTTTACTACTGCC 57 81681618 81681638 CTTCTTCATCTTAGTGGAACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Arhgap30 ENSMUSG00000048865 ENSMUST00000111282 1 1 2 119 1 173335221 173335239 TAATGTCTCCTTGGTCAGG 58 173337398 173337495 TTCTCATCTGATGCTAGGG 58 NA Mus musculus 50 Phf3 ENSMUSG00000048874 ENSMUST00000088310 2 1 2 80 1 30865654 30867542 GAGTACTTGACAGAGGACC 58 30865592 30865611 TTCCACATAATCCCAAACTG 57 NA Mus musculus 50 Tada3l ENSMUSG00000048930 ENSMUST00000043333,ENSMUST00000032410,ENSMUST00000113107,ENSMUST00000113106 2 4 4 60 6 113325242 113325841 AAACCCAGATCCTTACTGAC 59 113325201 113325219 CCTAGCTTCAGGAATCGTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 2310061F22Rik ENSMUSG00000049482 ENSMUST00000116412,ENSMUST00000054465 2 2 2 81 8 125003029 125003048 CTTGTCTAGGTTGTTCAGCT 59 125003092 125003192 CACAATCAGATGGGTCCTC 59 NA Mus musculus 50 Pgbd5 ENSMUSG00000050751 ENSMUST00000116406,ENSMUST00000052580,ENSMUST00000095165 1 3 3 82 8 126898334 126900019 GAGAAGCAAGGGATCTACTG 59 126898271 126898289 TTGGTCAACATGGATGGAG 59 NA Mus musculus 50 Kcnj16 ENSMUSG00000051497 ENSMUST00000106636,ENSMUST00000106635,ENSMUST00000053898 2 3 3 60 11 110886496 110886514 TTCAGAAGACAGTGAAGGG 58 110886538 110886556 GTCATTGACGAGTTTGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Otop1 ENSMUSG00000051596 ENSMUST00000063136,ENSMUST00000114099 1 2 2 80 5 38685774 38689101 AAACACTGGAAAGGTTTGG 58 38689145 38689163 TTGATTCATTCAGGACGCT 59 NA Mus musculus 50 Casr ENSMUSG00000051980 ENSMUST00000063597,ENSMUST00000114847 2 2 2 100 16 36515836 36517697 AGTGCATCAGGTATAACTTCC 59 36515756 36515774 AGTCATGTTGGGAAGAAGG 59 NA Mus musculus 50 Jam2 ENSMUSG00000053062 ENSMUST00000098407 3 1 2 270 16 84807180 84809602 TCTCCAAGGTGACTTTAAAGAC 59 84809831 84809851 TATGTAATACCATCCAGGCTG 59 NA DesignRelaxed Mus musculus 50 4930597O21Rik ENSMUSG00000053442 ENSMUST00000065878 3 1 1 61 6 66846040 66846058 GTTGTTTCCCAGAAATGGA 57 66845113 66845131 TTCAAACTGTCACGATCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Jmjd1a ENSMUSG00000053470 ENSMUST00000065509,ENSMUST00000101304 1 2 2 85 6 71550066 71550084 TAAAGGCCAATTGTCCCTG 59 71549498 71550018 CAAGGATGTCTGTTTCAGGT 59 NA Mus musculus 50 Krt16 ENSMUSG00000053797 ENSMUST00000007280 1 1 2 113 11 100107824 100107936 GCGAGAATATCCACTCCTC 59 100107589 100107607 TTGAACCTTGCTCCTTGAG 59 NA Mus musculus 50 Camk2d ENSMUSG00000053819 ENSMUST00000106402,ENSMUST00000106404,ENSMUST00000106397,ENSMUST00000106396,ENSMUST00000106401 2 5 9 98 3 126511160 126513568 GAAACAAGGAGTCAACTGAG 58 126537515 126537533 CAATCAGTTGCTCAGTGAC 58 NA Mus musculus 50 Eapp ENSMUSG00000054302 ENSMUST00000067272,ENSMUST00000110713 1 2 2 116 12 55793846 55793866 GAGAAAGTGAGTCATCAAGTG 58 55793071 55793768 CTGAAGAAGACCCTGTTCC 59 NA Mus musculus 50 Gm1008 ENSMUSG00000056824 ENSMUST00000103085,ENSMUST00000109281,ENSMUST00000073062 3 3 3 100 2 165183984 165184002 AAACCTGAGCTGATATGCA 58 165179541 165179559 TTTGTTGTCATGGTATCGG 57 NA DesignNoJunction Mus musculus 50 Cyb5d2 ENSMUSG00000057778 ENSMUST00000087640,ENSMUST00000079681 1 2 2 94 11 72596327 72602588 GTATTTGTCGGAAGACTGGT 59 72596252 72596270 ATGCCTTTAGTCACCATGG 59 NA Mus musculus 50 Cacnb2 ENSMUSG00000057914 ENSMUST00000114723,ENSMUST00000065126,ENSMUST00000114719 2 3 6 80 2 14885541 14885559 GAGGGAATTCATCATCCAG 57 14885601 14889580 CTATGTCTATAGCAGATGACG 57 NA Mus musculus 50 Rpl30 ENSMUSG00000058600 ENSMUST00000079735,ENSMUST00000009039 2 2 3 78 15 34371035 34371053 AATATTGAACTGGGCACAG 57 34370348 34370993 TATCAGAATCACCTGGGTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 2810408P10Rik ENSMUSG00000059423 ENSMUST00000105718,ENSMUST00000091484 1 2 2 103 4 147202854 147202872 TTCACTCAGGAAGAATGGG 58 147202570 147202787 CAATTGTAGCCTATGGCAC 58 NA Mus musculus 50 Sfrs17b ENSMUSG00000059708 ENSMUST00000051906,ENSMUST00000101641 2 2 2 135 X 34152654 34154262 CTTGAACTGTCTGGGATCC 59 34152537 34152555 CCAATCTAGAAGATGCCGA 58 NA InUTR Mus musculus 50 Tnip2 ENSMUSG00000059866 ENSMUST00000030991 2 1 2 86 5 34846239 34846257 CAACATCTGGCCAAATGTC 59 34844155 34846190 GATCCATCTTACCTCCTCAG 58 NA Mus musculus 50 Tac1 ENSMUSG00000061762 ENSMUST00000090679 2 1 2 83 6 7506752 7506771 CTTTGGATTAATGGGCAAGC 59 7507252 7507729 TGGCCATGTCCATAAAGAG 59 NA Mus musculus 50 Inadl ENSMUSG00000061859 ENSMUST00000041284,ENSMUST00000107029,ENSMUST00000102792,ENSMUST00000030290 1 4 10 82 4 98319183 98319203 CATAGAAATATCCAAGGGACG 57 98319244 98334282 GGATAACTATAGCATCCAAAGG 58 NA Mus musculus 50 OTTMUSG00000000651 ENSMUSG00000062551 ENSMUST00000054932,ENSMUST00000110331 3 2 5 128 13 27948373 27948393 CTAGTGAGCGAACTATCTACC 59 27948483 27949378 ATCTCCATTCATGGTGCTC 59 NA Mus musculus 50 Kcnj15 ENSMUSG00000062609 ENSMUST00000113862,ENSMUST00000113855,ENSMUST00000113854,ENSMUST00000113861,ENSMUST00000037154,ENSMUST00000113856,ENSMUST00000113859,ENSMUST00000113858,ENSMUST00000113863 1 9 9 60 16 95517482 95517501 CATGGTGACTTACAACTTGG 58 95517524 95517542 CCACTTTCATAATGCAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Luzp2 ENSMUSG00000063297 ENSMUST00000116312,ENSMUST00000082373 3 2 2 82 7 62427619 62462068 GTTATTTAAGGCCCAACAACTC 59 62462111 62462129 TGTCAAGAGCTGCTTTCTC 59 NA Mus musculus 50 Hmgb1 ENSMUSG00000066551 ENSMUST00000085546,ENSMUST00000110505,ENSMUST00000093196 2 3 3 60 5 149861331 149861349 AGCCCTATGAGAAGAAAGC 59 149860476 149861308 TAGGCAGCAATATCCTTCTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Htatsf1 ENSMUSG00000067873 ENSMUST00000088652 1 1 2 80 X 54317368 54318186 GCTCCTTCTGTTTGATAGAC 57 54318229 54318247 TGAATACAATGGTCAGCCT 58 NA Mus musculus 50 Syt11 ENSMUSG00000068923 ENSMUST00000107505,ENSMUST00000090945 2 2 2 83 3 88552819 88565660 GAGGAACATTCAGAAGTGC 58 88552754 88552772 ACCACTGTCATTCTCTGTG 59 NA Mus musculus 50 4930589L23Rik ENSMUSG00000068957 ENSMUST00000091023 2 1 1 60 3 79376315 79376334 AAACCAGACTCAATTCTGAG 57 79376356 79376375 AGTTTGTGGAGTTTCTTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Eif2s3y ENSMUSG00000069049 ENSMUST00000091197 3 1 2 98 Y 348525 348546 CAGAATGTTACAGATCTTGTGG 59 348603 349832 AGGAAACATGTCTGACTAGTC 59 NA Mus musculus 50 Trpc2 ENSMUSG00000070425 ENSMUST00000106949,ENSMUST00000094129,ENSMUST00000084843,ENSMUST00000106951,ENSMUST00000106944,ENSMUST00000106943 2 6 8 88 7 109239051 109239069 TCATGATCATCCTGACTGC 59 109239121 109242053 TTCGTTGAAATTGCCTAGC 58 NA Mus musculus 50 AW555464 ENSMUSG00000072825 ENSMUST00000101018,ENSMUST00000092279 1 2 2 80 12 113981688 113981706 GGACCAGAACATGAATGAC 58 113981750 113981891 TCAAAGATCACCTCCTCAC 58 NA Mus musculus 50 Nfxl1 ENSMUSG00000072889 ENSMUST00000087216,ENSMUST00000074948 2 2 2 60 5 72932106 72932125 GTGGTCATAAATGCTTGCTG 59 72931865 72931883 ACCATCTTTGGACAAGGAG 59 NA DesignNoJunction Mus musculus 50 EG432637 ENSMUSG00000073168 ENSMUST00000110973,ENSMUST00000101547 1 2 2 82 12 22186413 22186431 TTTGCTGGATCCTTCTCAG 59 22186149 22186370 AAGTGTAGCCTATAACAGTGAG 59 NA Nonspecific Mus musculus 50 BC099486 ENSMUSG00000073171 ENSMUST00000101549 1 1 1 100 12 21786255 21840019 CATTGAGGAGGTTTAGTCTCC 59 21786175 21786193 TGAACTCCCTGTGTTTCTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 2610002J02Rik ENSMUSG00000073684 ENSMUST00000105627,ENSMUST00000097747,ENSMUST00000105628,ENSMUST00000105626 3 4 4 122 4 154625047 154625065 AAATTCTGGTCGAACTCCC 59 154630249 154630267 CTATCCACATCTAGCTGGG 58 NA DesignNoJunction Mus musculus 50 Alg6 ENSMUSG00000073792 ENSMUST00000107007,ENSMUST00000107006,ENSMUST00000097961 1 3 3 88 4 99419566 99419691 TCAACATTTAGCATGCTGC 59 99419741 99419761 CCACAAGCTATTACAAATGCC 59 NA Mus musculus 50 Fbxw15 ENSMUSG00000074060 ENSMUST00000056745,ENSMUST00000098360 1 2 2 91 9 109467909 109467927 AACAAGAAAGGGACAAGAC 57 109462430 109467854 AGGTTATAACGCTCTTGTG 57 NA Mus musculus 50 EG545963 ENSMUSG00000074118 ENSMUST00000098451 2 1 1 62 7 53038686 53038704 TTACTCTAGCTCTGGACGT 59 53038642 53038660 TCATCCAAGCACTCAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-50 ENSMUSG00000076562 ENSMUST00000103363 1 1 1 82 6 69650833 69650852 GTCTGGGAACTCTTATTCTC 57 69650770 69650788 AACTAGTAAACTGCTGGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV15-1/DV6-1 ENSMUSG00000076841 ENSMUST00000103653 2 1 1 60 14 54179740 54179758 ACAAGCACCTTCTTAGTGG 59 54179779 54179800 GCAATAGTAGAAGGCATTTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2BE20_MOUSE ENSMUSG00000078884 ENSMUST00000109001,ENSMUST00000109004,ENSMUST00000109002 1 3 4 80 2 176139456 176139476 GATGCTTCTCAGAAGAGTCTC 59 176139516 176139742 TTCCCAACTGTAACCTATAGC 59 NA Nonspecific Mus musculus 50 A2AQL5_MOUSE ENSMUSG00000079324 ENSMUST00000112332 2 1 2 123 2 68502444 68504201 GCACAAGTGAATCAGAATTAGG 59 68505660 68505678 TGAACCACATCATCCAGTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Phyhd1 ENSMUSG00000079484 ENSMUST00000091132,ENSMUST00000113645,ENSMUST00000113648 3 3 7 119 2 30130197 30130216 AAATTTCTTGGTCCCTCCTG 59 30132576 30132684 AGACTTCTAACCAAAGCCTG 59 NA Mus musculus 50 ENSMUSG00000042969 ENSMUSG00000042969 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 1700014B07Rik ENSMUSG00000048749 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 ENSMUSG00000052673 ENSMUSG00000052673 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Tbc1d9 ENSMUSG00000074228 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 TRAJ29 ENSMUSG00000076900 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-669e ENSMUSG00000080653 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Itgb2l ENSMUSG00000000157 ENSMUST00000000161,ENSMUST00000113773,ENSMUST00000113772 2 3 3 80 16 96650709 96652184 AACGCCTACAGTAAACTCTC 59 96650648 96650668 GGAGTCGTAGGTAACTTTCAG 59 NA Mus musculus 50 Mkrn2 ENSMUSG00000000439 ENSMUST00000000449 3 1 1 93 6 115567377 115567395 CTTTACCGTCATGCTTACC 58 115567451 115567621 AGTTAAAGAACCTCACAGTG 57 NA Mus musculus 50 Pdgfb ENSMUSG00000000489 ENSMUST00000000500 3 1 1 82 15 79835954 79835972 GTATGAAATGCTGAGCGAC 58 79833836 79835910 CATCTTCATCTACGGAGTCTC 59 NA Mus musculus 50 2500003M10Rik ENSMUSG00000001017 ENSMUST00000076639,ENSMUST00000107342 3 2 8 117 3 90307190 90310037 TTAAGCAGAGCTTAAAGCAG 58 90307092 90307110 CTCTGGATTATGGGTAGGC 58 NA Nonspecific Mus musculus 50 Emd ENSMUSG00000001964 ENSMUST00000088313,ENSMUST00000002029 1 2 3 107 X 71500634 71500654 CATTCTCCTATCAGTTCTCAG 57 71500859 71501090 CATTATAGTCCTTGCTCTGG 57 NA Mus musculus 50 Clgn ENSMUSG00000002190 ENSMUST00000002259,ENSMUST00000109831 1 2 2 80 8 85920912 85920933 TAAGACACCTCAACCTATAGGA 59 85920974 85921562 TTTGATAAGACCCACCCAG 58 NA Mus musculus 50 Lmf1 ENSMUSG00000002279 ENSMUST00000063344,ENSMUST00000116641,ENSMUST00000115111 3 3 4 87 17 25782189 25782207 TCTTGTGCCTTTCTTCCTG 59 25782258 25791379 GATGATGAGGATCACCTGG 59 NA Mus musculus 50 Angptl4 ENSMUSG00000002289 ENSMUST00000002360 2 1 1 89 17 33917789 33917807 AGCAATTGTTCCAGAAGGT 59 33917583 33917736 AGAGGTCTATCTGGCTCTG 59 NA Mus musculus 50 Gsbs ENSMUSG00000002930 ENSMUST00000052827 3 1 1 60 6 55972426 55972444 TCAGACGACATACTAGGCA 59 55972467 55976029 GGTCTGAAAGGTCATCTGAG 59 NA DesignRelaxed Mus musculus 50 Nosip ENSMUSG00000003421 ENSMUST00000107830,ENSMUST00000107829,ENSMUST00000003513 3 3 3 149 7 52329401 52329419 GAAAGACTTTGACTGCTGC 59 52330050 52331449 TTCTCATAGGCCTTCACCT 59 NA Mus musculus 50 Impdh1 ENSMUSG00000003500 ENSMUST00000078155 2 1 1 82 6 29157189 29159230 CTGATGAAGTGGACCTGAC 59 29157125 29157143 CACTGTATCCATGGGAGAC 59 NA Mus musculus 50 Ercc1 ENSMUSG00000003549 ENSMUST00000003645 1 1 1 104 7 19940511 19940649 CTACATTTGGATCCCTGGA 58 19941773 19941792 GTAGTACTTCAAAGAGCCTG 57 NA Mus musculus 50 Mett11d1 ENSMUSG00000004561 ENSMUST00000047899 2 1 1 80 14 52506584 52506602 ACAGAGGAGAAACTTCGTG 59 52506646 52506907 TTCACTGTAGCTGAGTTCC 58 NA Mus musculus 50 Arhgef18 ENSMUSG00000004568 ENSMUST00000004684 1 1 1 80 8 3447080 3448390 GGAATTTCAAGAGCGACTG 58 3448434 3448452 ATCTCCAGGTAGATCTGCT 59 NA Mus musculus 50 Pias4 ENSMUSG00000004934 ENSMUST00000005064 3 1 1 119 10 80620261 80620403 GTGCTGAGGATCTGTTACTC 59 80620080 80620099 CTTGTTGGAGGGATAGTAGC 59 NA Mus musculus 50 Ctr9 ENSMUSG00000005609 ENSMUST00000005749,ENSMUST00000098103 2 2 2 80 7 118187526 118188901 CGTTGATTGCTATCTACGC 58 118188945 118188963 GCTTCCTTAAACCAGTCTG 58 NA Mus musculus 50 Pps ENSMUSG00000006127 ENSMUST00000006286 2 1 1 80 11 75460717 75460736 ACTATGTAGCCTATGTCTGG 57 75460776 75460922 CACTGATGTTGATATACACCTG 58 NA Mus musculus 50 Mobkl1a ENSMUSG00000006262 ENSMUST00000006424 3 1 2 183 5 89150139 89172339 TTCTTGTTTGGTAGTCGCT 59 89172485 89174090 AATCCACAGTGTTAACTGCA 59 NA Mus musculus 50 Neu1 ENSMUSG00000007038 ENSMUST00000007253 2 1 1 181 17 35069761 35070953 CTCAGGCATTCAGAAACAG 58 35071098 35071116 GGTTGAAATCGTGATCGTG 59 NA Mus musculus 50 Rps18 ENSMUSG00000008668 ENSMUST00000008812 3 1 1 176 17 34089252 34089360 GAAGTACAGCCAGGTTCTG 59 34088992 34089011 TTCTTCTTGGATACACCCAC 59 NA Nonspecific Mus musculus 50 Fxyd5 ENSMUSG00000009687 ENSMUST00000009831 3 1 1 80 7 31820289 31820412 CTACTACGATGATACTACCCTC 58 31820230 31820250 GTGAGAATGATAATTCCCGTG 58 NA Mus musculus 50 Pou6f2 ENSMUSG00000009734 ENSMUST00000041343 3 1 2 95 13 18243947 18264256 ACAAGGACAGATTATTGGGA 58 18243871 18243889 ATAGGCTGTACTTGAAGGC 59 NA Mus musculus 50 Rassf1 ENSMUSG00000010067 ENSMUST00000093786,ENSMUST00000010211 2 2 2 88 9 107459815 107459834 TTTCTCAAGCTGAGACTGAG 59 107459885 107460115 GGAGCCATCCTTATTCAGG 59 NA Mus musculus 50 2610507B11Rik ENSMUSG00000010277 ENSMUST00000010421 3 1 1 80 11 78087394 78087975 CCATAGTGGGACAATATCCC 59 78088017 78088036 CAAGTTGCCCAGAAATTCTG 59 NA Mus musculus 50 1700049J03Rik ENSMUSG00000011052 ENSMUST00000011196 1 1 1 73 17 26691350 26691368 AAGTACATTGCAGACAGGA 58 26691295 26691313 CTTTAGCTCCATGTCTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mlkl ENSMUSG00000012519 ENSMUST00000056157 2 1 1 80 8 113851759 113851778 GAGAGTATCACAGATCTCCA 57 113846684 113851717 AAGTGAACCTCACTATTCCA 58 NA Mus musculus 50 Phox2b ENSMUSG00000012520 ENSMUST00000012664 3 1 1 299 5 67489089 67489944 CGCAGTTCCATACAAACTC 58 67487755 67487773 GAGGAGTCAGACTTCTTCC 58 NA DesignNoJunction Mus musculus 50 Zfp715 ENSMUSG00000012640 ENSMUST00000012796,ENSMUST00000107986,ENSMUST00000048015,ENSMUST00000086011 3 4 4 122 7 50557066 50557085 TAACTGTGAACTTCAGCCAG 59 50556618 50556981 GACTGGGAATGGAATACCC 59 NA DesignNoJunction Mus musculus 50 Bicc1 ENSMUSG00000014329 ENSMUST00000014473,ENSMUST00000105435,ENSMUST00000105434,ENSMUST00000105433 2 4 4 80 10 70410567 70410585 CAAGTTCTGGTACTCCCAG 59 70409735 70410525 GTATCGTAGAGAAACCTGTGG 59 NA Mus musculus 50 Abr ENSMUSG00000017631 ENSMUST00000108408,ENSMUST00000072740,ENSMUST00000108407,ENSMUST00000094012,ENSMUST00000040910,ENSMUST00000065028,ENSMUST00000039558 3 7 7 80 11 76237580 76237599 GGCATCTACAGGATATCAGG 59 76236668 76237539 TAGGATGTCCTTGTTATTGGC 59 NA Mus musculus 50 Serinc3 ENSMUSG00000017707 ENSMUST00000017851,ENSMUST00000099107 2 2 2 80 2 163452201 163453616 ATATTCTAGCTTCCGTACTTCG 59 163452142 163452161 TCACCAAGGATAACACTGTC 59 NA Mus musculus 50 Stk4 ENSMUSG00000018209 ENSMUST00000109382,ENSMUST00000018353,ENSMUST00000088291 3 3 3 82 2 163943789 163943807 TTGGCAAGAATGTATCTGG 57 163943851 163977417 GCTCTTGAGAAACTCATAGTC 58 NA Mus musculus 50 Prl8a2 ENSMUSG00000018259 ENSMUST00000018403,ENSMUST00000110363 2 2 2 80 13 27442010 27442867 TGAAACACTTGTTTCACGC 59 27442910 27442929 TTTGTGACATTAGAGTGGCA 59 NA Mus musculus 50 2610027L16Rik ENSMUSG00000019297 ENSMUST00000019441 2 1 1 83 14 56365439 56368178 AGTCGTCTGAAACACAGAG 59 56368225 56368243 GAAGGCGATTCAAGAAGGT 59 NA Mus musculus 50 Gdpd2 ENSMUSG00000019359 ENSMUST00000019503,ENSMUST00000113744 2 2 2 90 X 97927831 97928144 TTCAATGAATTCCTGTTCCG 58 97928197 97928215 ATGCATATGTGACCAGGAG 59 NA Mus musculus 50 Bat1a ENSMUSG00000019432 ENSMUST00000068056,ENSMUST00000093645 3 2 2 80 17 35385948 35385966 GGTCATGATGTTCAGTGCT 59 35386008 35388205 AAGATCTCCATAGGATCTTGC 59 NA Mus musculus 50 Med23 ENSMUSG00000019984 ENSMUST00000092646,ENSMUST00000020159 3 2 2 80 10 24623625 24624074 GAGCTACCACAAGAAATATCC 58 24624116 24624134 GACTGGATTGGTACAGGAG 59 NA Mus musculus 50 Ccdc41 ENSMUSG00000020024 ENSMUST00000020212 2 1 1 81 10 94202926 94211696 CCAGTGAAGTGAAAGAGCT 59 94211741 94211759 TCACTCTTAGCTCTTGCTG 58 NA Mus musculus 50 Cnot2 ENSMUSG00000020166 ENSMUST00000105267,ENSMUST00000064218,ENSMUST00000105266,ENSMUST00000020374 3 4 5 108 10 115964959 115964980 CAAGAAAGAAGTTTGTAGAGGG 58 115954429 115964891 GATGCCAGCATATCTTTCTC 58 NA Mus musculus 50 Gnb2l1 ENSMUSG00000020372 ENSMUST00000020640,ENSMUST00000102788 3 2 2 180 11 48615263 48615283 GTTATCTCCTCTGATGGTCAG 59 48615863 48615881 TTATGGTCTTGTCTCGGGA 59 NA DesignNoJunction Mus musculus 50 Gna13 ENSMUSG00000020611 ENSMUST00000106702 2 1 2 83 11 109227009 109227027 CTATCAGAGCCTTATGGGA 57 109227074 109241544 TATGTCAGGTCTCCATCAG 57 NA InUTR Mus musculus 50 Abca8b ENSMUSG00000020620 ENSMUST00000020948,ENSMUST00000106669 1 2 2 80 11 109811397 109811417 CATGTCGTTAATGGACTACCT 59 109811189 109811356 GAACACGGGATTTGTATGAC 58 NA Mus musculus 50 Nf1 ENSMUSG00000020716 ENSMUST00000071325,ENSMUST00000108251,ENSMUST00000108248,ENSMUST00000097941 3 4 4 80 11 79248356 79248377 GTCCTTCATCAGTTAGATAGCA 59 79248417 79250201 CATTTGTGAGCTGATTTCCC 59 NA Mus musculus 50 Vsx2 ENSMUSG00000021239 ENSMUST00000021665 1 1 1 89 12 85917272 85917290 TTCAATGAAGCCCACTACC 59 85917343 85933129 GAACCACACCTGTATCCTG 59 NA Mus musculus 50 Hapln1 ENSMUSG00000021613 ENSMUST00000022108 2 1 1 96 13 89741333 89741352 CTTACCCTGGAGGATTATGG 58 89741411 89744808 ACACCACACCTTGTAACTC 59 NA Mus musculus 50 Naip1 ENSMUSG00000021640 ENSMUST00000022142 2 1 1 96 13 101207271 101207289 ATATCCAAGGCTATGAGGG 57 101203268 101206386 TTGCAGTAAGCTGATACCA 58 NA Mus musculus 50 Wbp4 ENSMUSG00000022023 ENSMUST00000022601 2 1 1 80 14 79867265 79869924 ACAGAAACAGGAGAATCCA 58 79867203 79867222 ACTGTCCTTACTAGAAAGCA 57 NA Mus musculus 50 Mcpt1 ENSMUSG00000022227 ENSMUST00000022836 2 1 1 81 14 56637977 56638194 TGTTACTGAAGCTTGAAGAG 57 56638238 56638256 TCGATAAAGTCAGAGGGAC 58 NA Mus musculus 50 Ropn1l ENSMUSG00000022236 ENSMUST00000110408,ENSMUST00000022844 2 2 2 112 15 31373121 31373140 CCTTTGCCTATGTTTACCAG 58 31371117 31373049 GCCATTCTTTCTAGATTCTGAC 58 NA Mus musculus 50 Myo10 ENSMUSG00000022272 ENSMUST00000110457,ENSMUST00000073021,ENSMUST00000022882,ENSMUST00000110450 3 4 4 82 15 25729977 25730884 ATTCAAAGAGACAGGCTACTG 59 25730928 25730946 CCTCGTTCAGTAGTTTCGT 59 NA Mus musculus 50 Rnf19a ENSMUSG00000022280 ENSMUST00000022890 3 1 1 94 15 36173981 36175185 AAACTGTTTCAACAGGTTGG 59 36173906 36173924 TAACTGTTCCCAAGCTCAC 59 NA Mus musculus 50 Ebag9 ENSMUSG00000022339 ENSMUST00000022964 3 1 1 105 15 44459174 44459933 CTAAGCAGACAGATGTGGAG 59 44460000 44460019 AAAGAGTTCTGCTGAGTAGC 59 NA Mus musculus 50 Alcam ENSMUSG00000022636 ENSMUST00000023312 2 1 1 80 16 52270805 52270824 AACATTAACTTGCACAGCAG 59 52268926 52270763 TGCTCTGGAATACTTATCGC 59 NA Mus musculus 50 Slc35a5 ENSMUSG00000022664 ENSMUST00000023344 3 1 1 89 16 45157636 45157654 TGTACACATTCCTGCTAGG 58 45152780 45157583 ACTTGTTCTCTTCATTGGC 57 NA Nonspecific Mus musculus 50 4930511J11Rik ENSMUSG00000022715 ENSMUST00000023400 1 1 1 122 16 8409849 8412206 TTTCTCTTTGGAGCCATGG 59 8409745 8409764 TATATCCACCTGATCCAGCA 59 NA Mus musculus 50 Arl6 ENSMUSG00000022722 ENSMUST00000099646,ENSMUST00000023405 1 2 2 80 16 59621166 59622859 CTGAATCACCCAGATATTAAGC 58 59621107 59621125 GGTCACTGAGTCTCTAAGG 58 NA Mus musculus 50 Ropn1 ENSMUSG00000022832 ENSMUST00000023530 2 1 1 84 16 34666829 34666847 ATTGCTGAAGCAGTTTACC 58 34666895 34669998 CATGGCTCCGAAATATTCG 58 NA Mus musculus 50 Sva ENSMUSG00000023289 ENSMUST00000024059 1 1 1 82 6 41992253 41992582 TGTCTCTGAAAGCACTTACC 59 41992627 41992645 GTAGTGGTTCGTCAGAGTC 59 NA Mus musculus 50 Dlx2 ENSMUSG00000023391 ENSMUST00000024159 1 1 1 228 2 71383609 71384042 GGACAAGGAAGACCTTGAG 59 71382940 71382958 CTTCTTGAACTTGGATCGG 58 NA DesignNoJunction Mus musculus 50 Enpp4 ENSMUSG00000023961 ENSMUST00000113579,ENSMUST00000024757 2 2 2 113 17 44236612 44238263 AAATTAGGTGACCATGGCT 58 44236517 44236535 ATCCACAGTGTTGATGGTG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Ttc27 ENSMUSG00000024078 ENSMUST00000024882 2 1 1 80 17 75147034 75147052 TTAGCAGATAGTGAACGGT 57 75147096 75150411 GAAATTTGTGCAGACTCCA 58 NA Mus musculus 50 Mbd2 ENSMUSG00000024513 ENSMUST00000114946,ENSMUST00000065466 3 2 3 191 18 70728612 70740315 ACTACTTCAGTCCAAGTGG 58 70742074 70742092 TCTGCTTCTTAATGAGCCG 59 NA DesignNoJunction Mus musculus 50 Gnal ENSMUSG00000024524 ENSMUST00000025402,ENSMUST00000076605 2 2 2 85 18 67295285 67351035 ATTCCCAGGAGTTCTTTGAC 59 67351083 67351101 CTGGTACTCGTTGGATCTC 59 NA Mus musculus 50 Impa2 ENSMUSG00000024525 ENSMUST00000025403 2 1 1 82 18 67461895 67461913 GACAGAAACAGATCACCGA 59 67461959 67466338 CTTCTGCAATGAACCTGTG 59 NA Mus musculus 50 Pcyox1l ENSMUSG00000024579 ENSMUST00000025472 3 1 1 98 18 61859145 61861857 TTCATGAGGATCTACAAGTACC 59 61859068 61859086 GGTCATGTTGACAAAGGTG 58 NA Mus musculus 50 Mrpl16 ENSMUSG00000024683 ENSMUST00000025586 1 1 1 60 19 11847481 11847499 ACTGACTTTACAGAAGGCA 58 11848647 11848665 CCCAATGGAGATAACCACC 59 NA DesignNoJunction Mus musculus 50 Acy3 ENSMUSG00000024866 ENSMUST00000054030 1 1 1 82 19 3988161 3988179 CCGCCTCTTTCTGTATGAG 59 3988225 3988409 CCATCTCCAGACAGATTCC 59 NA Mus musculus 50 Aldh3b1 ENSMUSG00000024885 ENSMUST00000051803,ENSMUST00000100035 3 2 2 162 19 3915382 3918049 GAAGCCAGGTTATCAAACAG 58 3914030 3914048 TTGGAGAAGGTGTCAAAGG 59 NA Mus musculus 50 Taf5 ENSMUSG00000025049 ENSMUST00000026027 3 1 1 81 19 47150325 47150346 CCTAAGAAGGATAGTATTGGCT 58 47150387 47150503 ACTCAGGAAGAGGAATTCTG 58 NA Mus musculus 50 Kcnip2 ENSMUSG00000025221 ENSMUST00000026247,ENSMUST00000079431,ENSMUST00000086993 1 3 3 81 19 45869016 45869035 GATGATAGACTGAACTGGGC 59 45868778 45868972 TGATGTCGAGCATTTCCTC 59 NA Nonspecific Mus musculus 50 Smarcc2 ENSMUSG00000025369 ENSMUST00000105235,ENSMUST00000099131,ENSMUST00000026433 1 3 3 80 10 127900758 127900777 GATTTCCAGAATCCATCACG 58 127900817 127900931 GCAATTATTCTGTACCAAGGAC 59 NA Mus musculus 50 Muc2 ENSMUSG00000025515 ENSMUST00000026590 1 1 1 80 7 148887319 148887337 TGGCTGCTATATTGAGGAC 58 148887379 148888011 GTGCATGTATAAGACTTGCAG 59 NA Mus musculus 50 Farp1 ENSMUSG00000025555 ENSMUST00000026635 2 1 1 83 14 121680184 121681540 CATTTGAAAGGTGGATGGA 57 121681586 121681605 GGTGAGATTCTTTGTGACTC 58 NA Mus musculus 50 Mkln1 ENSMUSG00000025609 ENSMUST00000026699 2 1 1 80 6 31409059 31418141 GAGAAAGAGAATGGTCCGAG 59 31418183 31418202 GCCCAATGTGTAGATTTGTC 59 NA Mus musculus 50 Rhbdl1 ENSMUSG00000025735 ENSMUST00000026831 3 1 1 186 17 25972137 25972235 CCAATGTTGTCATGAACTGG 59 25971890 25971908 CTTACACCTACCACTGCAC 59 NA Mus musculus 50 Casp12 ENSMUSG00000025887 ENSMUST00000027009 3 1 1 80 9 5348949 5350409 TCTCCATCAGAATCCAAGAG 58 5350450 5350470 CATTAGATGTGATTCATGGGC 59 NA Mus musculus 50 Daf2 ENSMUSG00000026401 ENSMUST00000027654,ENSMUST00000112488 2 2 2 101 1 132308102 132310633 GTGTATAGAGGAATCTAAGGTCC 59 132308023 132308041 GGAACACTTTCTGTTGTGG 58 NA Mus musculus 50 Il20 ENSMUSG00000026416 ENSMUST00000027673,ENSMUST00000112468 3 2 2 81 1 132806201 132806220 CATACCCTGAGAAAGATCAG 57 132804991 132806157 CCATGTGAGAATGACAGAC 57 NA Mus musculus 50 Kif5c ENSMUSG00000026764 ENSMUST00000028102,ENSMUST00000112714 3 2 2 85 2 49556556 49556574 TTGTCATTTGCTGTTCTCC 58 49556623 49566255 CTTGATGGTCTTTGCTCTC 58 NA Mus musculus 50 Strbp ENSMUSG00000026915 ENSMUST00000072186,ENSMUST00000028279 3 2 2 80 2 37442067 37446187 TATAGCTCCAGGTTACGGA 59 37439602 37439621 AACAGAACCATTCTCTTGGG 59 NA Mus musculus 50 Dhrs9 ENSMUSG00000027068 ENSMUST00000063690 1 1 1 104 2 69232507 69232525 AATGTCTCCAGCATTGGAG 59 69232593 69235685 TTTCATATCCCGCCTTAGG 58 NA Mus musculus 50 Phospho2 ENSMUSG00000027088 ENSMUST00000112266,ENSMUST00000028494 1 2 2 225 2 69628362 69630396 CCACTGTAATAATGCTGGAG 58 69633568 69633586 CAAAGTCAAACACCAACAG 57 NA DesignNoJunction, InUTR Mus musculus 50 Tgm3 ENSMUSG00000027401 ENSMUST00000110299,ENSMUST00000028886 2 2 2 80 2 129864329 129867497 TACAAGTATCCAGAAGGTTCC 58 129867537 129867557 GAAAGATGCGTTAGGTTTGAG 59 NA Mus musculus 50 Nfatc2 ENSMUSG00000027544 ENSMUST00000109184,ENSMUST00000074618,ENSMUST00000109186,ENSMUST00000099068 2 4 7 110 2 168332864 168348749 AGAAGACTACAGATGGGCA 59 168332452 168332470 TGTGCTTGTTCCGATACTC 59 NA Mus musculus 50 1700061I17Rik ENSMUSG00000028009 ENSMUST00000029642 1 1 1 61 3 116770735 116771899 CTACAAACAGGCTCACTCC 59 116770692 116770710 TACTGCATTTGATTGCTGG 58 NA DesignRelaxed Mus musculus 50 Ash1l ENSMUSG00000028053 ENSMUST00000090933 3 1 1 81 3 88874498 88874518 CTATGAGATCATTCCCTTGGA 58 88874561 88876378 TTTGGGTCTCCCTTTACAG 58 NA Mus musculus 50 2510027J23Rik ENSMUSG00000028133 ENSMUST00000106465 1 1 5 272 3 120862669 120862687 GTGAGTGGATCGGAATCAG 59 120861924 120861942 CTGAGATTCTGCTGGATCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Lphn2 ENSMUSG00000028184 ENSMUST00000106128,ENSMUST00000106127,ENSMUST00000037655 3 3 4 101 3 148499515 148500538 GGGAAATTGCGTATAAAGATGG 59 148499435 148499453 TGAAGATGCAGATAGCCAG 59 NA Mus musculus 50 Slc35d1 ENSMUSG00000028521 ENSMUST00000036195,ENSMUST00000072164,ENSMUST00000106846,ENSMUST00000094947 3 4 4 99 4 102885830 102886486 TACCTCGAAAGACGTTTCC 59 102883959 102883977 AGAACTGTAAACATGGGCA 59 NA Mus musculus 50 Cc2d1b ENSMUSG00000028582 ENSMUST00000030320,ENSMUST00000106665 2 2 2 81 4 108299401 108299662 ATTGCCAAGCAATATCAGG 58 108299707 108299725 CTGGAGGAACAGGTAACTC 58 NA Mus musculus 50 Epha10 ENSMUSG00000028876 ENSMUST00000106185 3 1 2 97 4 124577184 124579806 CTATGAGAAGGGTCAGAGTG 58 124579866 124579884 AAACGTATCTGGTAGCAGG 59 NA Mus musculus 50 Pgd ENSMUSG00000028961 ENSMUST00000084124 2 1 1 82 4 148532117 148532135 CTCATCTGTGAGGCTTACC 59 148530889 148532072 TTCCATTCTTCAAATGCCTG 58 NA Mus musculus 50 Zcchc4 ENSMUSG00000029179 ENSMUST00000113901,ENSMUST00000031077,ENSMUST00000113904 1 3 3 82 5 53195676 53198199 TTCTTTGATGGAAAGGCTG 57 53198245 53198263 TCTGTCACCATAATCACCC 58 NA Mus musculus 50 ENSMUSG00000029360 ENSMUSG00000029360 ENSMUST00000031305 2 1 1 72 5 118517593 118517611 GACAGAACAGCTCCTACAG 59 118518485 118518503 TTGTAGAAATTTGGAGCCC 57 NA DesignNoJunction, InUTR Mus musculus 50 Rfc5 ENSMUSG00000029363 ENSMUST00000086461 2 1 1 96 5 117829908 117830786 GCAGACATCGAGTACAGAC 59 117829830 117829849 CAACTATCAGGTCTCTGGTG 59 NA Mus musculus 50 Ppef2 ENSMUSG00000029410 ENSMUST00000031359 1 1 1 80 5 92673681 92673699 CCTTGTTCTTCATGGTGGA 59 92668159 92673639 GTAGAAACAATCTTGTGCCTG 59 NA Mus musculus 50 Pde6b ENSMUSG00000029491 ENSMUST00000031456 3 1 1 80 5 108855919 108856137 CAGATGAAATCGCAGAATCC 59 108856179 108856198 AAACTTCCCAAATTCCAGGT 59 NA Mus musculus 50 Wipi2 ENSMUSG00000029578 ENSMUST00000036872 1 1 1 108 5 143142195 143142822 CAACTTAGAAGCCTACACAG 57 143142893 143142911 AATCATGGGAGGATGTTCG 59 NA DesignRelaxed Mus musculus 50 Sds ENSMUSG00000029597 ENSMUST00000066540 2 1 1 181 5 120931648 120931666 CATCAAGGAAGGAAAGCTG 58 120933194 120933596 GAATCTTCTCATCGTCCAC 57 NA Mus musculus 50 Wasf3 ENSMUSG00000029636 ENSMUST00000016143 2 1 1 87 5 147263509 147263528 GCAAATTCCCTTCAAGACAG 59 147263577 147264906 TATCCTGTAGTGAGACCTCC 59 NA Mus musculus 50 Asb15 ENSMUSG00000029685 ENSMUST00000031696,ENSMUST00000090534 2 2 2 83 6 24508705 24508723 ATGAGAAAGGATGGTTCCC 58 24508769 24509158 TATAGGATGCATCCAGAACC 58 NA Mus musculus 50 Gcc1 ENSMUSG00000029708 ENSMUST00000090511,ENSMUST00000064377 2 2 2 100 6 28369295 28370298 AAGAAATGAGGAAGACAGCC 59 28369214 28369232 TACCTCAGAGATCTGGCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hibadh ENSMUSG00000029776 ENSMUST00000031788 2 1 1 134 6 52498913 52498931 CTGAATATGAGCTCCGGAC 59 52497045 52498815 CAATCCCAGATCCTTAGCC 59 NA Mus musculus 50 Svopl ENSMUSG00000029830 ENSMUST00000096040,ENSMUST00000040486 1 2 2 82 6 37991153 37991542 AGCAGAAAGAGACCAAGAC 59 37991089 37991107 TAGGAAGAGTGCAATGTGG 59 NA Mus musculus 50 Atf7ip ENSMUSG00000030213 ENSMUST00000032335 2 1 1 82 6 136530971 136535569 AACTCCTGTGAATACAGTGTC 59 136535613 136535631 CTGAGGTCTGCAGTTTAGG 59 NA Mus musculus 50 1100001H23Rik ENSMUSG00000030214 ENSMUST00000032336 3 1 1 94 6 136584079 136584098 TTATTCCCTCCCTATCTCCC 59 136583088 136584024 AGGAAGGACCTTAATAAGAGC 58 NA Mus musculus 50 Slco1b2 ENSMUSG00000030236 ENSMUST00000042812,ENSMUST00000087577 1 2 2 80 6 141605445 141606037 CCATGTACTTAGGTACTCTGC 59 141606078 141606097 GCTTAGCAAACACAGATGAC 59 NA Mus musculus 50 Tmtc1 ENSMUSG00000030306 ENSMUST00000060095,ENSMUST00000100772 3 2 2 81 6 148284260 148284784 GTCATCAGTTATGTGACTGTC 58 148284199 148284217 TGTCTTGCTCTGAGAAGAG 58 NA Mus musculus 50 Ift122 ENSMUSG00000030323 ENSMUST00000112925,ENSMUST00000112923,ENSMUST00000038234 2 3 3 80 6 115860340 115860358 AGATGTACATCTCAGCAGG 58 115860401 115862459 TGTCTATCAACATGTCCACC 59 NA Mus musculus 50 NP_001025048.1 ENSMUSG00000030411 ENSMUST00000032571 1 1 1 84 7 19527699 19535810 TTCTACCCAGGAACTACAG 57 19535858 19535876 TTTCTGCGATAAAGCTGTG 58 NA Mus musculus 50 Rpl28 ENSMUSG00000030432 ENSMUST00000032597 1 1 2 60 7 4744971 4744990 CCAGTTTCTTGATCAAGAGG 58 4745011 4745124 GCTTTCAGATTATTTGGCTCC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Lass3 ENSMUSG00000030510 ENSMUST00000066475 3 1 1 80 7 73931012 73934478 GACATTTGGCTAGAGTCTG 57 73934522 73934540 GGTGAAGATGAAGAACAGG 57 NA Mus musculus 50 Cd19 ENSMUSG00000030724 ENSMUST00000032968 1 1 1 83 7 133553897 133554006 GATGATGGACTTCCTGAGC 59 133553166 133553184 TCTTCATAGGACTGGGACC 59 NA Mus musculus 50 Bag3 ENSMUSG00000030847 ENSMUST00000033136 1 1 1 117 7 135683749 135683768 CAGATAAACAGTGTGGACAG 58 135685343 135685361 GAAGAGGATGAGCAGTCAG 59 NA DesignNoJunction Mus musculus 50 Ctbp2 ENSMUSG00000030970 ENSMUST00000033269 2 1 1 85 7 140181731 140181749 TTCTTCGTGACTTCAGCTC 59 140180026 140181682 GGTGGATACCTGTATGTGG 59 NA Mus musculus 50 Hdac6 ENSMUSG00000031161 ENSMUST00000115642,ENSMUST00000033501 3 2 2 81 X 7513556 7513574 TCCTAATCGTGGATTGGGA 59 7513374 7513515 GACACGTATAATACACTAGGGTC 59 NA Mus musculus 50 Slit2 ENSMUSG00000031558 ENSMUST00000033967 1 1 1 80 5 48638453 48641027 TCACACTTAGCGATTGGAG 59 48641071 48641089 ATATTCCGACTTCACCCAG 58 NA Mus musculus 50 Fgf20 ENSMUSG00000031603 ENSMUST00000034014 2 1 1 90 8 41366521 41366539 GGACTGGTCAGTATCAGAG 58 41365344 41366470 CAGAAGTCAATTTCTCTGATCC 58 NA Mus musculus 50 Pou4f2 ENSMUSG00000031688 ENSMUST00000034115 2 1 1 82 8 80959492 80959510 TCGTCTCCCAGAGTAAGAG 59 80959428 80959446 GTTCATGGTGTGGTAAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Vmn2r-ps14 ENSMUSG00000031715 ENSMUST00000043359 3 1 1 93 8 83235699 83237847 TAGTAATTCAACAAGGGAGGC 59 83235626 83235644 ACATGTGTAGCACCATGTC 59 NA Mus musculus 50 Dhodh ENSMUSG00000031730 ENSMUST00000034166 2 1 2 80 8 112125628 112127210 ATTAACAGTTTGGGACGTG 57 112125566 112125585 CCAGAAGGTTTAATGATGCA 58 NA Mus musculus 50 Mt2 ENSMUSG00000031762 ENSMUST00000034214 1 1 1 154 8 96697068 96697086 TGCAAATGTACTTCCTGCA 59 96697345 96697365 GTCTATTTACACAGATGTGGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Lypla3 ENSMUSG00000031903 ENSMUST00000034377 1 1 1 81 8 108678853 108678871 CTACTTCACACTCTGGCTG 59 108678914 108684072 GTAAACCAGCCTGATATTGTC 58 NA Mus musculus 50 D730048I06Rik ENSMUSG00000032108 ENSMUST00000098903 2 1 2 161 9 35597311 35597557 AACAGGATTCCCTCTACAG 57 35585664 35585683 TTTCTCTTGTTCCTCTTCAG 57 NA DesignNoJunction Mus musculus 50 Inha ENSMUSG00000032968 ENSMUST00000037330 3 1 1 61 1 75506443 75506462 ATATCTCCTTCCAAGAGCTG 58 75506486 75506504 GAAGATGAAACTGGGAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc35a4 ENSMUSG00000033272 ENSMUST00000036158 3 1 1 236 18 36841933 36841951 TGTTACTCACTGAGCTGAC 58 36842151 36842169 AGAGGCAGTACAATAGAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Aytl1b ENSMUSG00000033794 ENSMUST00000049088 2 1 1 60 5 107862080 107862098 TAACTTGCCTACTCAACCT 57 107862119 107862140 CGACTTTATCAGATGTTTCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tpst1 ENSMUSG00000034118 ENSMUST00000040721 1 1 1 83 5 130590462 130590480 CTTGGATATGACCCATACG 57 130590527 130605386 TTTATAGACCCTCCTGGTG 57 NA Mus musculus 50 Tspan8 ENSMUSG00000034127 ENSMUST00000080630,ENSMUST00000035563 1 2 2 94 10 115272429 115276938 TTCAGTCGGAGTTCAAGTG 59 115276994 115277014 TCCTGTACATTGACATGACTC 59 NA Mus musculus 50 Cybasc3 ENSMUSG00000034445 ENSMUST00000099695,ENSMUST00000099694 1 2 2 103 19 10654958 10654977 GAGTCTTGCAGTGTTAAGTG 58 10655040 10656796 CAATAACACCTTTAGACTCAGC 59 NA InUTR Mus musculus 50 Cnot6l ENSMUSG00000034724 ENSMUST00000113005,ENSMUST00000036646 3 2 2 83 5 96560259 96563043 GTTAGAGATCTCGGGTAGAG 58 96560195 96560213 TTGTCATTTAGGTGCAGTG 57 NA Mus musculus 50 Dpp4 ENSMUSG00000035000 ENSMUST00000047812 2 1 1 80 2 62212580 62216276 GACTGGGTTTATGAAGAGGA 58 62212519 62212537 GGCATAAGCTAGAAACGTG 58 NA Mus musculus 50 Ccl5 ENSMUSG00000035042 ENSMUST00000035938 3 1 1 62 11 83339550 83342659 GTGTTTGTCACTCGAAGGA 59 83339506 83339526 TTCTTGAACCCACTTCTTCTC 59 NA DesignNoJunction Mus musculus 50 Secisbp2 ENSMUSG00000035139 ENSMUST00000040117,ENSMUST00000110044 1 2 2 82 13 51750595 51752254 GCAGTTTGAAATCTGATGGT 58 51752298 51752317 AGGTTTAGAGGTAGATGCAC 58 NA Mus musculus 50 Hpse ENSMUSG00000035273 ENSMUST00000045617 1 1 1 80 5 101114046 101114064 GTTGTTCAGGAAACCAGTG 58 101110035 101114003 TTCAGTTGGACAGATTTGGA 59 NA Mus musculus 50 Gm93 ENSMUSG00000035420 ENSMUST00000039121 3 1 2 125 18 50440312 50441149 CCATCGTAGTAAGGGAACC 59 50441238 50441256 GATGGACAGGATGAAGAGG 59 NA Mus musculus 50 Aldh1b1 ENSMUSG00000035561 ENSMUST00000044384 1 1 1 60 4 45815757 45815775 TGGATGAAGTCATCAAGGT 58 45815799 45815817 TTACCATGCCACTTGTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Isg15 ENSMUSG00000035692 ENSMUST00000085425 3 1 1 180 4 155573891 155573910 ACAGCAACATCTATGAGGTC 59 155573730 155573748 AAATGCTTGATCACTGTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rnf38 ENSMUSG00000035696 ENSMUST00000045793,ENSMUST00000102934,ENSMUST00000098098,ENSMUST00000107836 2 4 4 84 4 44150479 44150497 CGTAGTAGATACCGATCCC 58 44147833 44150431 CTGGAAGCATTGATAGCAC 58 NA Mus musculus 50 Krt222 ENSMUSG00000035849 ENSMUST00000103132,ENSMUST00000038214 1 2 2 161 11 99096449 99097458 ACCATTCAGACAGAGAAAGTG 59 99096308 99096329 TGGCAGATTATCTTGTCTACTC 59 NA Mus musculus 50 Rab6ip1 ENSMUSG00000035901 ENSMUST00000080437 1 1 1 80 7 117077176 117077194 GGTGGAGAATGTGTTTCAG 58 117070516 117077132 AGTCTCTGGTAATGCTGTG 58 NA Nonspecific Mus musculus 50 Myf6 ENSMUSG00000035923 ENSMUST00000044210 3 1 1 135 10 106930525 106930882 ATAACTGCTAAGGAAGGAGG 58 106930409 106930427 GTTACTTCTCCACCACCTC 59 NA Mus musculus 50 Fstl4 ENSMUSG00000036264 ENSMUST00000036796 2 1 1 80 11 52882167 52882186 GTGGAGTCACTGTTTAAGGA 59 52882228 52885906 CTTTAGCACATACTGAGCCA 59 NA Mus musculus 50 Skp1a ENSMUSG00000036309 ENSMUST00000037324,ENSMUST00000109072 2 2 3 89 11 52050356 52050374 GCAGAGTTCTGATGGAGAG 59 52050427 52056098 ATTCCCAAATCTTCCAGCA 59 NA Mus musculus 50 Rnf113a1 ENSMUSG00000036537 ENSMUST00000046433 1 1 1 60 X 34732316 34732334 ACTGATTGCTAAACTGGGA 58 34732356 34732376 TAGAGAATCAGAAACACCACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Unc84a ENSMUSG00000036817 ENSMUST00000058716,ENSMUST00000110884,ENSMUST00000078690,ENSMUST00000110883,ENSMUST00000100517 2 5 5 63 5 139699685 139699703 TTGATTCGCACATTAGCAC 58 139699730 139701225 TTGACTGTCCTGGTTTCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Edg7 ENSMUSG00000036832 ENSMUST00000039164 2 1 1 168 3 145904251 145947629 CAGTGATGACCGTCTTAGG 59 145947760 145947779 TTGTACGAGTAGATGATGGG 58 NA DesignNoJunction Mus musculus 50 Pml ENSMUSG00000036986 ENSMUST00000085673,ENSMUST00000114136,ENSMUST00000041209 1 3 3 91 9 58082730 58094789 CTGACTGACATCTACTGCC 59 58082657 58082675 ATATCGCAATGGAGATGGC 59 NA Mus musculus 50 BC038156 ENSMUSG00000037019 ENSMUST00000047868 2 1 1 65 9 30880993 30881012 TACTACCGGGAGTTAGACTG 59 30881040 30881058 GATATCGGGAAAGCGTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1110059M19Rik ENSMUSG00000037086 ENSMUST00000040002 2 1 1 60 X 42445203 42445222 ACACCCTCTTACACTAACAC 58 42445242 42445263 GTTTATTTCTGCTGTTGCTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Chst7 ENSMUSG00000037347 ENSMUST00000044138 1 1 1 103 X 19637956 19637974 GTTATGAGGACCTGGTGTG 59 19638041 19638059 CATATTGAATGCGAAGGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Trmt6 ENSMUSG00000037376 ENSMUST00000039554,ENSMUST00000110126 2 2 2 80 2 132633990 132634008 GAGACAAGAAGAGCAGAGG 59 132632724 132633946 GCCACAATCAAACCATCTG 59 NA Mus musculus 50 Azin1 ENSMUSG00000037458 ENSMUST00000065308,ENSMUST00000110329 2 2 2 84 15 38420217 38421239 CAGTGATTGGTATGAGATGC 58 38420152 38420170 CTGAATACAAGAGGGTGCA 59 NA Mus musculus 50 Bcdin3d ENSMUSG00000037525 ENSMUST00000040313 2 1 1 60 15 99301289 99301307 GAGTTCTTTCTTGAGCCAG 58 99301247 99301265 TACTGACATGCAGAAGACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Inf2 ENSMUSG00000037679 ENSMUST00000101029,ENSMUST00000039111 3 2 2 80 12 113844548 113845193 GAAGCATGAGATTGAGAACC 58 113845236 113845254 AGCAGAACATAGAACTGGT 58 NA Mus musculus 50 Pcdh18 ENSMUSG00000037892 ENSMUST00000035931 3 1 1 88 3 49557361 49557471 GGAGCTATAGATATGCCCT 57 49557291 49557309 ATAATCGCTATCTCCTGCT 57 NA Mus musculus 50 Zc3h7a ENSMUSG00000037965 ENSMUST00000037633 1 1 1 80 16 11141855 11145282 ACAGTTTGATCTATGCAACC 58 11141794 11141812 TCTGGACTATGAGCAAAGG 58 NA Mus musculus 50 Dlec1 ENSMUSG00000038060 ENSMUST00000055775 3 1 1 81 9 119033968 119033986 CTTTATCCGGTTTGAGCCT 59 119034031 119036118 GGAAACACTTGAGGTAGCA 59 NA Mus musculus 50 Leprel1 ENSMUSG00000038168 ENSMUST00000039990 2 1 1 80 16 25997275 25997293 GGACTATAAAGCCACAGCA 59 25992923 25997232 CCAGCATTATAGCTTTCCAG 58 NA Mus musculus 50 Kcna7 ENSMUSG00000038201 ENSMUST00000107774 3 1 1 103 7 52665107 52665125 AAACACATGGTGACTGAGG 59 52665192 52665210 CTTAGTCCTTAACCCAGCA 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ccdc111 ENSMUSG00000038225 ENSMUST00000040468 3 1 1 92 8 47675631 47675650 GATACTCTGCGAGTTCTCAC 59 47672040 47675576 AATGGACTCCACTGAAGTG 59 NA Mus musculus 50 Lasp1 ENSMUSG00000038366 ENSMUST00000043843,ENSMUST00000107572,ENSMUST00000107569 2 3 4 72 11 97661105 97661123 ACCATGAACCCTAACTGTG 59 97661158 97668139 ACTTATCCAGACAGTTCACC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Reep2 ENSMUSG00000038555 ENSMUST00000043484 1 1 1 80 18 35005737 35005851 GAGGACTTAGGAGATGAGC 58 35005895 35005913 ATCTTCTGAGGTCTCTGTC 57 NA Mus musculus 50 4930504E06Rik ENSMUSG00000038712 ENSMUST00000107187,ENSMUST00000039537 2 2 2 100 3 95095457 95096055 CTTTCAGCAGAATGTGGAC 58 95096118 95096137 TATACTCAAAGTCGGAGACG 58 NA Mus musculus 50 Akap7 ENSMUSG00000039166 ENSMUST00000041984 2 1 3 94 10 24959539 24987126 CTGGAGATAGCAGAGACTG 58 24959463 24959481 TTCATAAAGGTCAGGTGGG 58 NA Mus musculus 50 Icmt ENSMUSG00000039662 ENSMUST00000048892 1 1 2 104 4 151673861 151673879 CTCCTTCCTCCTGAATCAC 59 151673946 151674661 GTAATCTGCTTCAGTTCTGG 58 NA Mus musculus 50 Azi1 ENSMUSG00000039781 ENSMUST00000106227 3 1 2 251 11 119935159 119936882 GAGAGGTTCATCCATCAGG 59 119934279 119934449 TTTCTGTTGTTCCTGAATGG 58 NA DesignRelaxed Mus musculus 50 2410089E03Rik ENSMUSG00000039801 ENSMUST00000110617,ENSMUST00000053264 1 2 3 80 15 8138584 8138804 CACCTATCAGTGGTGAAGAG 59 8138845 8138865 TTTCTTGTAGAGCCTTCTTCC 59 NA Mus musculus 50 Scyl1bp1 ENSMUSG00000040124 ENSMUST00000045138 2 1 1 80 1 165324769 165324788 AACAGCGACTAATGGAAGAG 59 165322668 165324728 GGGTCTTCTTAGATCTTTCCG 59 NA Mus musculus 50 Sdro ENSMUSG00000040127 ENSMUST00000047134 3 1 1 79 10 127339454 127340635 TTCTCTGATAGCATCAGGC 58 127340678 127340696 GATGTCTTGTAGTTCCCTG 57 NA DesignNoJunction Mus musculus 50 Kcns1 ENSMUSG00000040164 ENSMUST00000045196 3 1 1 212 2 163993704 163993722 CTTCTATCTCACACTGCTG 57 163990714 163990732 AGGTACAGCAGTAAGATGC 59 NA DesignNoJunction Mus musculus 50 1700019B03Rik ENSMUSG00000040340 ENSMUST00000047265 2 1 1 83 8 3479209 3479227 CAAGGTTGGCTATAGTCCC 59 3479273 3483471 ACCTTGTCATACCTGTATGG 58 NA Mus musculus 50 Trim7 ENSMUSG00000040350 ENSMUST00000109213,ENSMUST00000046903 2 2 4 101 11 48661634 48662085 AGTTCAAAGAGGATCTCCAG 58 48663018 48663036 GATCCAGGGACAAGATGAG 59 NA Mus musculus 50 C1qtnf4 ENSMUSG00000040794 ENSMUST00000111466,ENSMUST00000036860 3 2 2 62 2 90730391 90730409 CTACTTAGCCACGATCACG 59 90730435 90730453 GAAAGTGATGTACTTGCCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tiprl ENSMUSG00000040843 ENSMUST00000043235 1 1 1 60 1 167157658 167157677 GATTATAAAGGAACGCTGCT 58 167152773 167157636 GATCTGTTGTAGGTACAACC 57 NA DesignNoJunction Mus musculus 50 Kcnd3 ENSMUSG00000040896 ENSMUST00000079169,ENSMUST00000098761 3 2 2 102 3 105262752 105262770 TTTATGCTGAGAAGGGCTC 59 105262836 105461543 ACCATGTCTCCATATCCCA 59 NA Mus musculus 50 E130014J05Rik ENSMUSG00000040943 ENSMUST00000041994,ENSMUST00000098603 2 2 2 80 3 133144385 133146216 CTCATGGAAGAAAGGTATGGA 59 133144325 133144343 GCTCTTGCCTTCTTTACCA 59 NA Mus musculus 50 H2-Ob ENSMUSG00000041538 ENSMUST00000069091,ENSMUST00000095342 2 2 2 82 17 34379597 34379615 CTTGGTGACATCTACAGCT 58 34379661 34380428 TATTCAGACTGAGCCATCC 58 NA Mus musculus 50 Pcca ENSMUSG00000041650 ENSMUST00000038374 3 1 1 87 14 123016029 123016048 GGGTGACAAGATAGAAAGCA 59 123016097 123037611 ATCTGCATCCTTTACTACCC 58 NA Mus musculus 50 B230112C05Rik ENSMUSG00000041817 ENSMUST00000042517 1 1 1 81 13 97881289 97881307 GAATATGGTCTTGCTGCTG 58 97881352 97883606 TTAGGGAATGGATCTGCAG 58 NA Mus musculus 50 Ankrd13a ENSMUSG00000041870 ENSMUST00000102578 3 1 1 81 5 115248590 115248609 TTTGACGAAGACTTTGACCT 59 115248653 115249403 TAGCCTTAAACTTCTGCGT 58 NA Mus musculus 50 Sh2b3 ENSMUSG00000042594 ENSMUST00000086310,ENSMUST00000040308 3 2 2 139 5 122269034 122269128 CTTTGTGTTGAAGGTGCAG 59 122268829 122268847 AGGAAAGAGGTAACTCGGT 59 NA Mus musculus 50 Xkr7 ENSMUSG00000042631 ENSMUST00000037235 2 1 1 60 2 152880077 152880095 TGGTTCAATGTCAAGGAGG 59 152880119 152880137 GCACGATGCAGTAGTAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Aqp11 ENSMUSG00000042797 ENSMUST00000084986,ENSMUST00000055379 3 2 2 60 7 104886030 104886048 AAGGATCTTAGCTTGCAGG 59 104885988 104886007 CTCTATGATGATCGCTTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ifnk ENSMUSG00000042993 ENSMUST00000058595 2 1 1 94 4 35099812 35099830 TGGAAGATTGTCACAGTGG 59 35099888 35101051 TTGAAGGTGGGTGATTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pnpla1 ENSMUSG00000043286 ENSMUST00000056866,ENSMUST00000114737 3 2 2 81 17 29022581 29023800 TAGCAAACTGAAGTCTGCA 59 29023843 29023863 GGGATGAGGTTTATAGGTGAC 59 NA Mus musculus 50 2510009E07Rik ENSMUSG00000043391 ENSMUST00000053336 2 1 1 94 16 21653813 21694290 CTGCAAATATGTGTATCAGCC 59 21653739 21653757 TTTGAATGGTGTTAGTCGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1497 ENSMUSG00000044040 ENSMUST00000061993 3 1 1 60 19 13869224 13869245 GAATCCACTCATCTATAGCCTG 59 13869185 13869204 CAGAGATTTCGTAATTGCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Edg6 ENSMUSG00000044199 ENSMUST00000053646 2 1 1 61 10 80961763 80961781 CTACTCCAAGGGCTATGTG 59 80961720 80961738 GGATAGCCACTAGGATGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cxxc4 ENSMUSG00000044365 ENSMUST00000053048 1 1 1 220 3 133903563 133903581 AAGAGGCTCATCAACTGTG 59 133921102 133921120 ACAAGACATTAGTTTGCCC 57 NA DesignNoJunction, InUTR Mus musculus 50 Rps2 ENSMUSG00000044533 ENSMUST00000054289 2 1 1 60 17 24858649 24858756 CTCCTTATCAGGAATTCACG 57 24858779 24858797 CTCTGAACAGAGACTCTGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 E230025N22Rik ENSMUSG00000044719 ENSMUST00000115682,ENSMUST00000052890 3 2 2 80 18 36854388 36854407 GATGCTGTTTGAAGAAGCTC 59 36852764 36854346 ATACGGTTAATCTGCACCAG 59 NA Mus musculus 50 Chchd8 ENSMUSG00000044881 ENSMUST00000054310 2 1 1 62 7 107687592 107687610 CAAGATGTCAACCTCAGTC 57 107687636 107687654 TCATCATCCTTCTTCACCG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Olfr1443 ENSMUSG00000045030 ENSMUST00000049724 1 1 1 80 19 12753666 12754580 AGGCTATCAGGATAACTTCC 58 12754620 12754641 ACCTAGAAGAATGAACTCTGTC 59 NA InUTR Mus musculus 50 Olfr1443 ENSMUSG00000045030 ENSMUST00000049724 2 1 1 80 19 12753665 12754580 TAGGCTATCAGGATAACTTCC 58 12754620 12754640 CCTAGAAGAATGAACTCTGTC 57 NA InUTR Mus musculus 50 Asxl3 ENSMUSG00000045215 ENSMUST00000097655 1 1 2 106 18 22683240 22683259 ACTAGCCAATATGTTGTCCC 59 22683328 22683445 CTTCTACAGTGGGATGGAC 59 NA Mus musculus 50 Rln3 ENSMUSG00000045232 ENSMUST00000061923 2 1 1 205 8 86567193 86567211 AGAAGCCAATACAGACCAC 59 86567006 86567025 TAATTTGGCTCTTGCTACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tcerg1l ENSMUSG00000045309 ENSMUST00000067216 1 1 2 80 7 145405063 145405082 AAAGTAAATTGCTGCTAGCC 58 145401517 145405020 CTTTAAATGTGGTCCTGGG 57 NA Mus musculus 50 Hsfy2 ENSMUSG00000045336 ENSMUST00000062085 2 1 1 60 1 56693334 56693352 CTGCTCCATTAAATGAGGT 57 56693292 56693311 GCTTGAGTGAAGATTCTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem88 ENSMUSG00000045377 ENSMUST00000050140 2 1 1 63 11 69211589 69211607 TTCAATCTCCTCTTGCTGG 59 69211544 69211562 CTAACATGATGACAGCAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Slco6b1 ENSMUSG00000045463 ENSMUST00000060976 2 1 1 80 1 98891649 98891667 GCATCAATCTTATTTGCCG 57 98885297 98891606 ATCTATGCACAACTCTTCAC 57 NA Mus musculus 50 Olfr209 ENSMUSG00000045504 ENSMUST00000055868 3 1 1 60 16 59361283 59361302 ATCTTTGTTCTATGGCACTC 57 59361242 59361261 ATTATCTTTGTCAGAGCCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Glb1 ENSMUSG00000045594 ENSMUST00000063042 1 1 1 82 9 114359717 114359735 TAAAGAAGTCCCAGAAGGC 58 114359779 114363315 CTGTCTTGAACTTTCTCAGAG 58 NA Mus musculus 50 Wdr89 ENSMUSG00000045690 ENSMUST00000062370 2 1 1 60 12 76733762 76733781 AAGCAAATCTACTGCATGAC 58 76733721 76733740 CCAGATGATTGAGATCCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Thtpa ENSMUSG00000045691 ENSMUST00000050575 3 1 1 63 14 55714467 55714485 AGAAGGTAGTGGATGGGAG 59 55714512 55714530 CTCATTGTGAGGTCCTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mrps12 ENSMUSG00000045948 ENSMUST00000056078 1 1 1 74 7 29524926 29524944 AAACTCAAAGTTGTGAGGG 57 29524870 29524889 GACCACTGTGAATTACTGTC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Epm2aip1 ENSMUSG00000046785 ENSMUST00000060711 1 1 1 60 9 111175725 111175746 AGTTCACTTCAGAGACATATGG 59 111175764 111175785 TTATACTGAAGGCAGGAAAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr156 ENSMUSG00000046961 ENSMUST00000061274 1 1 1 81 16 37947898 37948311 CAACCATTACTGAGTCCCA 58 37948355 37948374 AGAAAGGTCCACATAATCCC 59 NA Mus musculus 50 Pcdhb15 ENSMUSG00000047033 ENSMUST00000050034 2 1 1 60 18 37634477 37634497 AATTAGAGACAGAGATTCGGG 59 37634519 37634537 GAGATCATTCGCAATGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rexo1 ENSMUSG00000047417 ENSMUST00000057910 2 1 3 89 10 80005761 80006057 GACTGTGAGATGTCCTACAC 59 80005691 80005709 AAAGGTGTCATACACGACC 59 NA Mus musculus 50 Gsg2 ENSMUSG00000050107 ENSMUST00000052140 3 1 1 60 11 72949582 72949601 AGCCATGAAGCAAATAAGGA 59 72949541 72949559 GCTGAAACTCAGTACAGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 BC048562 ENSMUSG00000050641 ENSMUST00000057265 2 1 1 159 9 108347573 108348000 ACTTCCTTCGACAAAGGTC 59 108348123 108348141 GGAAGTCAGTCTGGTAGGA 59 NA Mus musculus 50 Prss27 ENSMUSG00000050762 ENSMUST00000059482 1 1 1 86 17 24179858 24179876 AACGGAATCCACTTCTGTG 59 24179926 24181239 TATGTCCGAAGTGTTGGAG 58 NA Mus musculus 50 Tmem125 ENSMUSG00000050854 ENSMUST00000060214 3 1 1 109 4 118215281 118215299 ATCTCTGACAGTTTGTCCT 57 118214961 118215208 CTATGGTTACCCTCACCTC 58 NA InUTR Mus musculus 50 Atp5k ENSMUSG00000050856 ENSMUST00000049628 2 1 1 79 5 108863096 108863359 TCTCCACTCATCAAGTTCG 59 108862839 108863053 TTTAGGTAACTGTAGCGCT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Zfp11 ENSMUSG00000051034 ENSMUST00000049778 1 1 1 67 5 130166680 130166698 AGAAACAAGAGCTTTGGGA 59 130164247 130166649 GTCAGAAAGATTCTCTGGG 57 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 Tas2r105 ENSMUSG00000051153 ENSMUST00000053652 3 1 1 60 6 131637045 131637066 CTTCATGGGTAATCTCCTTCTC 59 131637006 131637024 TGATTCACTTTACCGTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Xrcc1 ENSMUSG00000051768 ENSMUST00000063249 3 1 1 81 7 25352096 25352116 GAGTCTAGAAGACAGGAAACC 59 25352158 25352346 ACTAGGGACAGACAATTTGG 59 NA Mus musculus 50 Rgs14 ENSMUSG00000052087 ENSMUST00000063771 2 1 1 95 13 55481464 55482264 AGCAGCAAATCTGAGAGTC 59 55482323 55482341 GTCAGGTAGATACACGCAG 59 NA Mus musculus 50 Hook2 ENSMUSG00000052566 ENSMUST00000064495,ENSMUST00000098561 3 2 2 82 8 87517123 87517230 ACTCGAAGAATGTTCTGGG 59 87517276 87517294 TGCAGGATTTGAGAACTCG 59 NA Mus musculus 50 4732471J01Rik ENSMUSG00000053714 ENSMUST00000066316 3 1 1 108 7 26168752 26169828 GTGAGGTCATAGGAGATGAG 58 26169899 26170086 CATAGGAAGAACTGGGCTC 59 NA InUTR Mus musculus 50 Chchd3 ENSMUSG00000053768 ENSMUST00000066379,ENSMUST00000115091 2 2 2 86 6 32842346 32842364 GGAAGAGAAAGACCGAGTG 59 32802202 32842297 TAGAACTCTGAGCTCCTCTC 59 NA Mus musculus 50 6330403A02Rik ENSMUSG00000053963 ENSMUST00000066725 1 1 1 128 1 182372762 182372780 TTCTGGCTGAATATCGCTG 59 182368481 182369241 CTGATCCTTGTACCCTTGG 59 NA Mus musculus 50 Olfr411 ENSMUSG00000054406 ENSMUST00000052254 3 1 1 73 11 74161043 74161062 ATGGAACAGCAGTTACAGAG 59 74160989 74161007 TACAAAGATGACTGGCTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1365 ENSMUSG00000054890 ENSMUST00000068163 1 1 1 60 13 21647523 21647541 GTGATGGCTTATGATCGCT 59 21647481 21647501 GCATGATTACCATGTAGTGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000054990 ENSMUSG00000054990 ENSMUST00000068352 1 1 1 60 18 25288933 25288951 CCATCAGAAGTGGATTCCT 58 25288891 25288910 TCTAGGCATGTCACTAACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pdlim1 ENSMUSG00000055044 ENSMUST00000068439 1 1 1 80 19 40324189 40326413 CTCACAGTATCCAGGTCTG 58 40324127 40324147 ATTCATCTTGTAGGGATGACG 59 NA Nonspecific Mus musculus 50 2700049P18Rik ENSMUSG00000055184 ENSMUST00000068613 2 1 1 81 1 133430443 133430461 CAACAATGGACACTTCTGG 58 133430506 133435425 TAGGAGGTTTACACCAGTG 58 NA Mus musculus 50 Fev ENSMUSG00000055197 ENSMUST00000068631 3 1 1 258 1 74931734 74931752 GATCAACATGTACCTGCCA 59 74929073 74929091 GTTCATGTTAGGCTTGCTC 58 NA DesignNoJunction Mus musculus 50 Slc35f3 ENSMUSG00000057060 ENSMUST00000108759 1 1 1 90 8 128845142 128845160 GGAACTTTCTGTTCTTCCC 57 128845213 128906023 CAGCATTCCCTGTATCTCTG 59 NA DesignRelaxed Mus musculus 50 Bcl2 ENSMUSG00000057329 ENSMUST00000112751,ENSMUST00000080103 3 2 2 76 1 108608920 108608938 ATGACTGAGTACCTGAACC 58 108439956 108608882 TATAGTTCCACAAAGGCATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1431 ENSMUSG00000058641 ENSMUST00000072316 2 1 1 60 19 12284081 12284100 CACAATAACCCAGTTCATCC 58 12284121 12284141 AAGCAGAACTGTGATTCTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1431 ENSMUSG00000058641 ENSMUST00000072316 3 1 1 60 19 12284229 12284248 ACACCCATGTATTTCTTCCT 58 12284271 12284289 TGGAAGTAACAAAGCAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 1500016O10Rik ENSMUSG00000058966 ENSMUST00000098032,ENSMUST00000079423 3 2 2 83 7 133968597 133970986 CATAGATGACCAGCACTGG 59 133971032 133971051 AGGAACATGGCATAGATGTC 59 NA Mus musculus 50 EG382109 ENSMUSG00000059547 ENSMUST00000071917 1 1 1 80 9 109627457 109635030 CCCGATTGTCTTGATAGGT 58 109627395 109627413 TTCACCTCAGAAATGAGGT 58 NA Mus musculus 50 Arl6ip2 ENSMUSG00000059811 ENSMUST00000112437,ENSMUST00000068282,ENSMUST00000073602 2 3 3 80 17 80256580 80259140 AGAAGAGATTACAGGTGAAGC 59 80256520 80256538 GGTTTGAGAAGCAGTTGTG 59 NA Mus musculus 50 4930431L04Rik ENSMUSG00000061864 ENSMUST00000077447 1 1 1 90 8 61014760 61014779 CTATTCCTGGACAGATGGTC 59 60951766 61014707 ATGTTCACCTTTCCCTGAG 59 NA Mus musculus 50 Olfr815 ENSMUSG00000061961 ENSMUST00000071557 1 1 1 61 10 129339639 129339657 TATGCTCGGGAATTTAGCT 58 129339596 129339614 TTGGTGTCTTGAGAATGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr265 ENSMUSG00000062237 ENSMUST00000071294 1 1 1 60 14 51153196 51153215 CGTTGTCTACCTACTCATCC 59 51153238 51153256 ATCACAGTACACAGCACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cytl1 ENSMUSG00000062329 ENSMUST00000073554 3 1 1 98 5 38126904 38126922 GAGATCATGGCAGACTTCC 59 38128634 38128829 ACAGTAGTTATGGATGTCCAG 58 NA Mus musculus 50 4932435O22Rik ENSMUSG00000062391 ENSMUST00000063993 3 1 1 295 11 114285096 114309988 CAGGTTCCATAACCTTCCC 59 114277639 114277657 GGAAGTGATCGTGACTGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Bbs5 ENSMUSG00000063145 ENSMUST00000074963,ENSMUST00000112286,ENSMUST00000112285 1 3 3 80 2 69503122 69503143 GATGATGTGGAAATAGACTCTG 58 69505014 69505172 ACGATCTTGTTGCTTATTCC 58 NA Mus musculus 50 Olfr955 ENSMUSG00000063176 ENSMUST00000073946 3 1 1 60 9 39277971 39277989 TGTTGTTGCAGAATGTCAC 58 39277929 39277947 AGATATAGCCACATAGCGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Jazf1 ENSMUSG00000063568 ENSMUST00000074541 3 1 1 107 6 52727606 52727624 ATCAGCTCTGAAGCAATCC 59 52720363 52727538 GCCATTCACATTCTTGTATCTC 59 NA Mus musculus 50 EG434674 ENSMUSG00000063590 ENSMUST00000065651 1 1 1 100 19 8139008 8139026 TATTGTGGTCACATTGGCA 59 8137970 8138945 TACCTGTTGCCCTTAATGTG 59 NA Mus musculus 50 Olfr816 ENSMUSG00000063715 ENSMUST00000071605 1 1 1 60 10 129349210 129349228 TAGCGTCACTGGAAATCTG 59 129349168 129349187 TGTCTTCAGGTGAGTATCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000015136 ENSMUSG00000063751 ENSMUST00000077779 2 1 1 89 2 109749598 109749616 GTTCCACATGTCATCTTGG 58 109748226 109749546 ACACGTACTTCTGATCAGAC 59 NA InUTR Mus musculus 50 Olfr1283 ENSMUSG00000064266 ENSMUST00000082167 3 1 1 60 2 111209240 111209259 CATTGGCTTTATACATGCCA 58 111209282 111209300 TCCACAGAAAGGTAGTTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-219-2 ENSMUSG00000065485 ENSMUST00000083551 1 1 1 61 2 29701201 29701219 AACGCAATTCTTGTACGAG 58 29701158 29701176 CTCAACCACAGATGTCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Insl5 ENSMUSG00000066090 ENSMUST00000106869,ENSMUST00000084382 2 2 2 71 4 102699169 102699188 TTATCTACATCTGTGCCAGC 59 102690946 102699135 TCTCAGCTTGTTGAGAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000007917 ENSMUSG00000066107 ENSMUST00000084423 3 1 1 83 4 91858144 91858162 AAGAAGCACCTAGAAAGCC 59 91858006 91858097 TCTTCTCTTCAGCTACTCG 58 NA DesignRelaxed Mus musculus 50 Muc5b ENSMUSG00000066108 ENSMUST00000084424 3 1 1 80 7 149056879 149056898 CTGATGTATCCAACTGTACG 57 149057083 149057643 GACAGGTACTTGAGTCCTC 58 NA Mus musculus 50 Serpina3b ENSMUSG00000066364 ENSMUST00000085052 2 1 1 80 12 105372419 105376845 TAACAGTCTCTGAGATGATCC 58 105376885 105376905 CGACTATTGTGATTGCATCTC 59 NA Mus musculus 50 Olfr878 ENSMUSG00000066747 ENSMUST00000086061 3 1 1 60 9 37726768 37726789 TTATCTCTGTGAAGTTCTTCCC 59 37726810 37726828 CTCGTTGGCATAGGTACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pick1 ENSMUSG00000068206 ENSMUST00000053926,ENSMUST00000018295 2 2 2 80 15 79076867 79076886 TAAAGCCATCCCTGATACAC 59 79076928 79077711 ACCTTTAGACAGTACGACAG 58 NA Mus musculus 50 Olfr461 ENSMUSG00000068259 ENSMUST00000089490 1 1 1 60 6 40494119 40494137 GGAACCCTTTCTGAATCCT 58 40494077 40494097 GAAGGCCTCTATGAATTTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 2010200O16Rik ENSMUSG00000068732 ENSMUST00000090546,ENSMUST00000106622 2 2 2 124 3 108361873 108363119 GTGTATTCTACAAAGCTGCTG 59 108361769 108361787 CAGTTGATGAGTTGGAGGG 59 NA Mus musculus 50 ENSMUSG00000069334 ENSMUSG00000069334 ENSMUST00000091807 2 1 1 66 18 79307177 79307196 ACTATCTGACACAACAGGAG 58 79307225 79307243 CTATCACATCTCGCGTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Krtap9-1 ENSMUSG00000070335 ENSMUST00000093936 2 1 1 60 11 99735444 99735463 GATCTGTGAACCAACTTACC 58 99735486 99735504 GATGAAGCTGACAGGAGAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 MGI:1316722 ENSMUSG00000070448 ENSMUST00000096793 3 1 2 116 14 52076058 52076076 AATGCTGTTTATGTTGCGG 59 52076155 52079632 TTCTATATCTGCCTGCTGAC 58 NA Mus musculus 50 NP_001074731.1 ENSMUSG00000070471 ENSMUST00000041115 2 1 1 81 3 58427141 58427159 AGAATTCCATCACCCAGAG 58 58426387 58427096 AAGTTAAGCCAAGATGGGA 58 NA Mus musculus 50 OTTMUSG00000010747 ENSMUSG00000070609 ENSMUST00000094510 2 1 1 100 4 144207859 144207877 CTATTCCAGCCTAAGGCAG 59 144207940 144209572 AGATTGTGGTAACAGTCCAG 59 NA Mus musculus 50 Fryl ENSMUSG00000070733 ENSMUST00000101127,ENSMUST00000094700,ENSMUST00000042514 1 3 3 80 5 73499328 73499721 GCCAAAGTCATAGGAATGTC 58 73499267 73499285 CTCTTTGTCCAAATGTCGG 58 NA Mus musculus 50 EG574083 ENSMUSG00000071165 ENSMUST00000095430 1 1 1 254 8 22057341 22057359 TGGTTTCTTCTTGGCTCTC 59 22056616 22056634 ATGTTGCTCTCACTCAGAC 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 ENSMUSG00000071322 ENSMUSG00000071322 ENSMUST00000095726 3 1 1 80 17 7537621 7538643 TGTGGGTGCAGAATATTCC 59 7538684 7538705 TCTCATCAGTCTTTGTAGTGTC 59 NA Nonspecific Mus musculus 50 6530404N21Rik ENSMUSG00000071573 ENSMUST00000096114 2 1 1 81 19 33456904 33456923 TTTGACCTTGTCATCCTCAC 59 33277124 33456863 GGCGTTCACTAATTAAGTTCAC 59 NA Mus musculus 50 D19Ertd721e ENSMUSG00000071655 ENSMUST00000096255 1 1 1 80 19 8948324 8948634 GAGAGCCAAGAAGTATGGT 58 8948678 8948696 GGAGAAGAAGGAACAGGAC 59 NA Mus musculus 50 Gspt2 ENSMUSG00000071723 ENSMUST00000113891 3 1 2 99 X 91883633 91883651 GACTTCAGTCGTGTCACTC 59 91883714 91884444 TGAACCGTAAACCAAAGCT 59 NA InUTR Mus musculus 50 Snrpc ENSMUSG00000072511 ENSMUST00000100584 2 1 1 80 15 65779937 65780052 TCTACAACATTTCCAACCCA 59 65779876 65779895 TGGTCCTATTGCTCAAACAG 59 NA Mus musculus 50 4930522L14Rik ENSMUSG00000072762 ENSMUST00000100937 3 1 2 177 5 110180635 110180653 CTGTTTAGGGTGCTCAGTC 59 110168019 110168225 CCAATTGTAGCCTACAGCA 59 NA InUTR Mus musculus 50 EG545861 ENSMUSG00000072952 ENSMUST00000101222 2 1 2 63 6 85068619 85068637 TTGAGGTTGAAATGCACCT 59 85068570 85068592 CTCCTCTTCCTCCTAAAGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Gm377 ENSMUSG00000073007 ENSMUST00000101292 3 1 1 166 X 105058349 105060751 AAGCACTTATTACTGGTTGC 58 105065657 105065675 TTGCTGAATCTGATCTCCG 59 NA InUTR Mus musculus 50 ENSMUSG00000073464 ENSMUSG00000073464 ENSMUST00000097412 2 1 1 60 17 11924652 11924670 AAAGGGACAAGGAAGATGG 59 11924610 11924628 TCTCAGTTTGAGAATGCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 AI607873 ENSMUSG00000073490 ENSMUST00000042610 3 1 1 97 1 175662566 175665237 CTACAGCCCAGACAAAGAG 59 175662487 175662507 TCCTAAAGGTTCTGAAAGCTG 59 NA Mus musculus 50 Apitd1 ENSMUSG00000073705 ENSMUST00000105696 2 1 3 114 4 148506414 148506432 CAAACAGGTGAACTTCAGC 59 148501531 148505750 AGCAGTTTGCACATTTCTG 59 NA Mus musculus 50 Olfr599 ENSMUSG00000073950 ENSMUST00000098201 3 1 1 60 7 110486662 110486680 TCCCTTCTTTGTTGTATGC 57 110486701 110486722 GATAATGATTAGCAGGAAGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr556 ENSMUSG00000073969 ENSMUST00000098219 3 1 1 60 7 109818694 109818712 AGCATCTTCAGTTCAGGAG 58 109818734 109818754 AGTACATCTGAGTGAAACAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Amy2 ENSMUSG00000074266 ENSMUST00000098670 2 1 1 60 3 113124169 113124920 AATGATGCTTATCAGGTCAG 57 113124128 113124146 TCTCAAGTGCAAGATCCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ttll9 ENSMUSG00000074673 ENSMUST00000099197,ENSMUST00000103155,ENSMUST00000109801 1 3 3 80 2 152818937 152819809 GTGATGTCGTACATCCCTC 59 152819853 152819871 ATTCAGTGTGAATCGGGTG 59 NA Nonspecific Mus musculus 50 Olfr201 ENSMUSG00000074995 ENSMUST00000099656 2 1 1 60 16 59268846 59268865 CACCTTTGTAACCATCTTGG 58 59268805 59268823 CTTCTTTCTCAGGATGGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1160 ENSMUSG00000075141 ENSMUST00000074397,ENSMUST00000099839 3 2 2 66 2 87846521 87846540 TACATTGCAATCTGTAACCC 57 87846474 87846493 CCAACTGAATACAGACTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1046 ENSMUSG00000075197 ENSMUST00000099902 1 1 1 60 2 86057506 86057525 AACTGTTTATCCTCTCAGCC 59 86057465 86057483 AGAAGAGGTTTGCAGATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 6430510M02Rik ENSMUSG00000075371 ENSMUST00000100138 1 1 1 60 2 37433507 37433526 GCATTCGATTTCTTGTACCT 58 37433466 37433484 TGAGTGTACATGTGTTCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr362 ENSMUSG00000075377 ENSMUST00000100144 1 1 1 60 2 36960550 36960568 GAGCTGGCTATATTCTTGG 57 36960508 36960528 GTACAATAAGGGAACAAGGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000003947 ENSMUSG00000075410 ENSMUST00000100197 3 1 3 80 11 116518599 116518617 AGATTTACCAACCGAGTGG 59 116518891 116518909 TTGAAGGTCTGTGTCTGAG 58 NA DesignNoJunction Mus musculus 50 1700113I22Rik ENSMUSG00000075528 ENSMUST00000107257,ENSMUST00000107259,ENSMUST00000070395 1 3 7 80 11 101272450 101272468 GTTGTTACCATCGAAGGTG 58 101272197 101272407 CTTAATGACCTGAAGGTCAC 57 NA Mus musculus 50 IGKV4-80 ENSMUSG00000076540 ENSMUST00000103341 3 1 1 282 6 68966833 68967028 CAGTCATAATGTCCAGAGGAC 59 68966571 68966589 TGGCAGTAATAATCGGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV5-6 ENSMUSG00000076637 ENSMUST00000103446 3 1 1 71 12 114863905 114863923 TAGCTATGGCATGTCTTGG 59 114863852 114863870 CCACTACTAATGGTTGCGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-39 ENSMUSG00000076706 ENSMUST00000103515 3 1 1 60 12 116152873 116152891 TGTAGACCAATCTTCCAGC 58 116152831 116152849 AGAGTCCTCAGATGTCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV6-7/DV9 ENSMUSG00000076853 ENSMUST00000103665 3 1 1 135 14 54329648 54329807 ATGCTCCTCATATTCACAAGG 59 54329904 54329922 CATACCAGAACAGGGTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2010109K11Rik ENSMUSG00000078373 ENSMUST00000105165 1 1 1 60 12 33064953 33064974 ACAGAAGATCGACTATGTTTCC 59 33064995 33065013 GCCTTCAGAATACCCTGAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Raet1d ENSMUSG00000078452 ENSMUST00000095795 3 1 1 172 10 22091277 22091297 TACACAGAGATTATGAGCTGG 59 22091431 22092007 CTTGAGGTTGATCTTGGCT 59 NA Mus musculus 50 NP_001079009.1 ENSMUSG00000078509 ENSMUST00000105762 3 1 1 80 4 143581905 143582845 GTTGTTCAGGTACCTGGAG 59 143581843 143581862 AATGACTCCAAGTCTGACTG 59 NA Nonspecific Mus musculus 50 Ube2d3 ENSMUSG00000078578 ENSMUST00000106291 3 1 1 82 3 135125934 135125952 CTGCTATGTGATCCAAACC 58 135125995 135128167 CTGTTGTACTTATCTCTGTCTG 57 NA Nonspecific Mus musculus 50 Aoc2 ENSMUSG00000078651 ENSMUST00000041095,ENSMUST00000107264 1 2 2 111 11 101189816 101189834 CTTTACCTGGCTACCAACC 59 101190181 101190200 TCTGGTAATAGATGCTGCTG 59 NA DesignNoJunction Mus musculus 50 NP_001074884.1 ENSMUSG00000079003 ENSMUST00000095228 2 1 1 105 8 86523518 86523626 CAAGAGCAGGAAATTGATGG 59 86523694 86523712 GGTGCTCGTAGATCTTCAG 59 NA Mus musculus 50 Zfp664 ENSMUSG00000079215 ENSMUST00000111417 1 1 1 92 5 125343877 125365094 AGACCTACAAATCCAAGCT 58 125365326 125365346 ACTCTATAGAGTAGCATGCTG 58 NA DesignNoJunction, InUTR Mus musculus 50 2610042L04Rik ENSMUSG00000079410 ENSMUST00000112820 1 1 1 87 14 3071333 3072026 TCCTACAGCATTAAGGAGG 58 3072077 3072095 GCCTTCTGTTCTCATTCAG 58 NA Nonspecific Mus musculus 50 Phyhd1 ENSMUSG00000079484 ENSMUST00000091132,ENSMUST00000102860,ENSMUST00000113647,ENSMUST00000113645,ENSMUST00000113648,ENSMUST00000113643 1 6 7 110 2 30125348 30125366 ATGAGCAACTTCAAACCCA 59 30130059 30130210 GGACCAAGAAATTTCCTTTCTC 59 NA Mus musculus 50 6530402F18Rik ENSMUSG00000079499 ENSMUST00000028141 2 1 1 93 2 29106924 29106942 CAGAGTCTGGAGAAAGCTC 59 29106709 29106868 TTAATTCTTCTACCCAGGCG 59 NA DesignNoJunction Mus musculus 50 4933413N12Rik ENSMUSG00000079580 ENSMUST00000114683 2 1 1 162 17 29682492 29682511 CTGCTGGTAATTTGAGACAG 58 29663624 29663642 TAGCCATGATGGAGAAGAC 58 NA DesignNoJunction, InUTR Mus musculus 50 Icmt ENSMUSG00000079971 ENSMUST00000116087 3 1 1 60 4 151680607 151680628 AGGCTTTCAGGTATTATAAGGG 59 151680649 151680667 GACAACTCCTCCATCTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001098052.1 ENSMUSG00000080272 ENSMUST00000116573 3 1 1 93 17 55732535 55747296 AAATGCCACAGATCTAACAC 58 55732461 55732479 ATATGTCACAACCTTTGGG 57 NA Mus musculus 50 mmu-mir-1191 ENSMUSG00000080533 ENSMUST00000116883 3 1 1 93 7 27990575 27990593 TAGCAACATCTAAGCCAGC 59 27990650 27990668 AGTTCTAGGCCATCTAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Glra1 ENSMUSG00000000263 ENSMUST00000075603,ENSMUST00000102716 3 2 3 99 11 55379768 55387793 AACTTTAAAGGTCCTCCTGTG 59 55349985 55350006 GGAAGATGTTGACCCTATAGTC 59 NA Mus musculus 50 Alox12 ENSMUSG00000000320 ENSMUST00000000329,ENSMUST00000108574 1 2 2 95 11 70063752 70064963 ATGGCTATCCAGATTCAGC 59 70063675 70063693 GATCTTAGCCAAGAGCCAG 59 NA Mus musculus 50 Aire ENSMUSG00000000731 ENSMUST00000019257,ENSMUST00000105396,ENSMUST00000105395 3 3 4 88 10 77502467 77502486 GTAGAGATGAGCAGAAAGTG 57 77500725 77502416 CTCGTTCTTCTGGTTAACC 57 NA Mus musculus 50 Agpat3 ENSMUSG00000001211 ENSMUST00000105388,ENSMUST00000105390,ENSMUST00000105389,ENSMUST00000001240,ENSMUST00000105387 3 5 5 185 10 77745985 77746944 AGTACATGTGGTTTCTCCTG 59 77745201 77745219 TCACGTCATAGATAGCTGC 58 NA Mus musculus 50 Mef2d ENSMUSG00000001419 ENSMUST00000107559 2 1 3 90 3 87965715 87966890 TTAGATCTGAACAATGCCCA 59 87966943 87966961 GTAAACTTGGTGTTGCCAC 59 NA Mus musculus 50 Itga3 ENSMUSG00000001507 ENSMUST00000107739,ENSMUST00000073698,ENSMUST00000001548 3 3 3 81 11 94913802 94913820 GACACCTCCAACATTACCA 59 94912846 94913760 TGTCAAAGTCTTTGTAGTCCTC 59 NA Mus musculus 50 Tsc2 ENSMUSG00000002496 ENSMUST00000097374,ENSMUST00000097373 3 2 7 129 17 24733889 24733999 CATGCAAATATGGCCTCAC 59 24733690 24733708 AATAGTGCACCTCTTCACG 59 NA Mus musculus 50 Stat5b ENSMUSG00000004043 ENSMUST00000004145,ENSMUST00000107356,ENSMUST00000107357 3 3 3 93 11 100722702 100722720 GATGCAAGTGTTGTATGGG 58 100722777 100723050 CAAGTCAATAGCATCCCAC 58 NA Mus musculus 50 Prlr ENSMUSG00000005268 ENSMUST00000110548,ENSMUST00000110545,ENSMUST00000005400,ENSMUST00000110550,ENSMUST00000110546,ENSMUST00000110544 3 6 6 83 15 10249027 10249045 ATCACAGTAAATGCCACGA 59 10249089 10252151 CTCTGGTTCAACAATGTAAGTC 59 NA Mus musculus 50 Hmox1 ENSMUSG00000005413 ENSMUST00000005548 2 1 2 89 8 77621160 77621179 ATGAACACTCTGGAGATGAC 59 77621229 77622673 CTCAAACAGCTCAATGTTGAG 59 NA Mus musculus 50 Rps9 ENSMUSG00000006333 ENSMUST00000006496,ENSMUST00000108623,ENSMUST00000108625 1 3 3 97 7 3656282 3656300 GAGGGTCAAGTTTACCCTG 59 3656361 3657343 GAGCATTGCCTTCAAACAG 59 NA Nonspecific Mus musculus 50 Ankrd26 ENSMUSG00000007827 ENSMUST00000007971 1 1 3 80 6 118473654 118473742 CAAAGGATGGTCAAGAACAC 59 118473593 118473611 AACGTCTGTTTCCAGTCTC 59 NA Mus musculus 50 Hnrph1 ENSMUSG00000007850 ENSMUST00000109142,ENSMUST00000077817,ENSMUST00000069304 3 3 3 83 11 50196206 50196308 CTTATGGTGGAGGCTATGG 59 50196352 50196373 CTCTTCCAAATCTATCTGAACC 58 NA Mus musculus 50 Elavl2 ENSMUSG00000008489 ENSMUST00000107116,ENSMUST00000008633,ENSMUST00000107124,ENSMUST00000107114 2 4 13 108 4 90920257 90920847 CTTATGGAGTGAAGAGTAGGT 58 90920169 90920187 TACACAAATATGCACCAGC 58 NA Mus musculus 50 Ncaph2 ENSMUSG00000008690 ENSMUST00000088717 1 1 3 148 15 89200696 89200714 TGAAAGAACAGCTCGAGAC 59 89200912 89201042 AAAGTCATCTGCTGCTACC 59 NA Mus musculus 50 Hipk1 ENSMUSG00000008730 ENSMUST00000029438,ENSMUST00000106845 2 2 3 101 3 103562525 103562544 TTTCCTTACAACCTGGAACC 59 103558231 103562461 TTGCTTGTAGTCCAGTCTG 59 NA Mus musculus 50 Taz ENSMUSG00000009995 ENSMUST00000114180 3 1 4 81 X 71533428 71533797 CTTCCCAGAAGGAATTGGA 58 71533842 71534008 ATTCATTCCAACATGCCAC 58 NA Mus musculus 50 Akt1s1 ENSMUSG00000011096 ENSMUST00000107885,ENSMUST00000054343,ENSMUST00000107882,ENSMUST00000107880 1 4 4 60 7 52108283 52108301 TGAAACAGAGACATCTGGG 58 52108325 52109163 CATCATGAAGAGACCTCCA 58 NA DesignRelaxed Mus musculus 50 Mogat1 ENSMUSG00000012187 ENSMUST00000113524,ENSMUST00000012331 3 2 2 90 1 78525815 78534524 ATCTACACTGTTGTTGGCC 59 78534577 78534596 CTAGGTATGTCTGATGCAGC 59 NA Mus musculus 50 Trnt1 ENSMUSG00000013736 ENSMUST00000113249,ENSMUST00000113248,ENSMUST00000057578 1 3 5 80 6 106729028 106729191 TGATAGACTCTAGGGAACCA 58 106729234 106729252 CTTTGAGAAGACCATGCTC 58 NA Mus musculus 50 Trnt1 ENSMUSG00000013736 ENSMUST00000113249,ENSMUST00000113248,ENSMUST00000057578 3 3 5 81 6 106729027 106729190 GTGATAGACTCTAGGGAACC 58 106729234 106729252 CTTTGAGAAGACCATGCTC 58 NA Mus musculus 50 Gata5 ENSMUSG00000015627 ENSMUST00000015771,ENSMUST00000108890 2 2 2 63 2 180063013 180063031 TCTACATGAAGCTCCATGG 58 180062509 180062527 CTTGTCTGGATACTCTCCT 57 NA DesignNoJunction Mus musculus 50 Matn4 ENSMUSG00000016995 ENSMUST00000103104,ENSMUST00000109359,ENSMUST00000109358,ENSMUST00000103103,ENSMUST00000059332,ENSMUST00000109362,ENSMUST00000109361,ENSMUST00000109360 1 8 8 60 2 164218859 164218878 CTCTCAGGATGACATTTCAG 57 164218717 164218836 ATACATGACGATGCCTTCC 59 NA DesignRelaxed Mus musculus 50 Dnttip1 ENSMUSG00000017299 ENSMUST00000017443,ENSMUST00000109327,ENSMUST00000109326 3 3 3 99 2 164572269 164572972 GACCACAAGTTTCACAGAC 58 164573035 164573053 GTACTTGTTGAAGACACCC 57 NA Mus musculus 50 Wfdc2 ENSMUSG00000017723 ENSMUST00000017867,ENSMUST00000109345,ENSMUST00000109344,ENSMUST00000109343 3 4 4 140 2 164391428 164393842 CAAATTCTGAGCTTCAGCC 59 164393946 164393964 AAGGAGATGCTTTCATCGG 59 NA InUTR Mus musculus 50 Nkiras2 ENSMUSG00000017837 ENSMUST00000107376,ENSMUST00000051947,ENSMUST00000017981 1 3 3 60 11 100485569 100485588 AAACTTCAATCCTTGAGCAG 58 100485611 100486272 TCGATCATCTCAGAACCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 4632419I22Rik ENSMUSG00000018068 ENSMUST00000108039,ENSMUST00000018212 2 2 2 80 11 86028745 86029059 TTCACTTTCAGGGTTATCCA 58 86028684 86028703 TGAAATCCAAACAGATGTGC 59 NA Mus musculus 50 Slc6a8 ENSMUSG00000019558 ENSMUST00000033752,ENSMUST00000114464 1 2 4 99 X 70925323 70925341 TTTCCAAAGGGAGATCTCC 58 70925404 70925482 GTACATTCCACCCTTACCC 59 NA Mus musculus 50 Ankrd36 ENSMUSG00000020481 ENSMUST00000109856,ENSMUST00000020773,ENSMUST00000020774,ENSMUST00000109855 2 4 4 80 11 5471448 5474235 GAAGTTAAGACAAAGAACGGC 59 5474275 5474295 CAGTAAGAGTTCCACCATCTC 59 NA Mus musculus 50 Pik3cg ENSMUSG00000020573 ENSMUST00000053215,ENSMUST00000085469 2 2 3 80 12 32876993 32877011 CCCAGACTTCTTGTTTGTG 58 32861708 32876949 CTAACACAGACATCCTGGA 58 NA Mus musculus 50 0610010K14Rik ENSMUSG00000020831 ENSMUST00000021180,ENSMUST00000108578,ENSMUST00000100950,ENSMUST00000021181 1 4 9 94 11 70050443 70050461 GAGATAGAGATGCTGAGGG 58 70049702 70050385 TTTATCTGAGCCACTGTCC 58 NA Nonspecific Mus musculus 50 Rph3al ENSMUSG00000020847 ENSMUST00000021208,ENSMUST00000108420,ENSMUST00000108421 3 3 4 62 11 75720029 75720047 CTCCGTATTCTGCAAAGAC 58 75714361 75714379 CTTTCTAGGAAGTGCTGCA 59 NA DesignNoJunction Mus musculus 50 Per1 ENSMUSG00000020893 ENSMUST00000101004,ENSMUST00000021271 2 2 3 170 11 68915067 68915187 GAAACCAGGACACCTTCTC 59 68915318 68915339 GTGTAGTAGAGCCATAGAAGAC 59 NA Mus musculus 50 Tex21 ENSMUSG00000021056 ENSMUST00000021453,ENSMUST00000095612 1 2 2 92 12 77318068 77322477 CGTTTAAGGGAACATCTGGT 59 77317995 77318013 CATATAGGGCGAGAAGCTG 59 NA Mus musculus 50 Vrk1 ENSMUSG00000021115 ENSMUST00000021539,ENSMUST00000085026,ENSMUST00000072040 2 3 3 83 12 107289206 107289980 CAGAGCAAATTCAGAAATGG 57 107290025 107290044 TATCATGTAGACCAGATCCC 57 NA Mus musculus 50 Ccdc88c ENSMUSG00000021182 ENSMUST00000057748 1 1 5 88 12 102208657 102208675 AGGAGGAGTTCATTGAGAG 57 102208231 102208608 CTCTATAAAGATCAACTCCTGG 57 NA Mus musculus 50 1700020O03Rik ENSMUSG00000021254 ENSMUST00000071106,ENSMUST00000110212 2 2 2 85 12 87601627 87601645 AGTAGAAAGGATGGACTCC 57 87601694 87602574 CATGGTATCCTCTTTGAGC 57 NA Mus musculus 50 Kif13a ENSMUSG00000021375 ENSMUST00000056978,ENSMUST00000110121 3 2 2 80 13 46922115 46922133 AAAGTCCGAGAGCATAAGG 59 46920701 46922071 CTCAATGTCCTCAAAGCTG 58 NA Mus musculus 50 Pdlim7 ENSMUSG00000021493 ENSMUST00000069929 3 1 4 157 13 55610329 55610348 GAATATTGACGGTGAGAACG 58 55608972 55609229 GTCTGAGCAACTGTTTGTC 58 NA Mus musculus 50 Trpc7 ENSMUSG00000021541 ENSMUST00000109871 3 1 2 124 13 56883946 56884998 AACTCCAAGTTCAGGACTC 58 56877522 56877541 ACGTATCTCTTTATGAGCCG 59 NA Mus musculus 50 Rnf180 ENSMUSG00000021720 ENSMUST00000062286,ENSMUST00000069686 1 2 3 130 13 105957729 105971544 TCTTTCTCCAGACAGAACTG 58 105957618 105957636 ATGGAATCCTTTCCTGCAG 59 NA Mus musculus 50 Cldn10a ENSMUSG00000022132 ENSMUST00000047761,ENSMUST00000100314 1 2 3 68 14 119272917 119273418 AACAAGACACCCAGAATGG 59 119273450 119273468 ATACTTGGTCCGAGAAGAC 58 NA DesignRelaxed Mus musculus 50 EG433634 ENSMUSG00000022187 ENSMUST00000056145 3 1 1 85 3 104157043 104157061 GAAAGAACCCTTTCTGTGG 58 104156976 104156995 CAGTATTCAGACCATGATGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 5730410E15Rik ENSMUSG00000022340 ENSMUST00000090057,ENSMUST00000110269,ENSMUST00000110267 1 3 4 80 15 44509125 44509143 TTCTTCTCCAAGTAGCAGC 59 44507044 44509083 ATGTATCTTCCAGACCTTCTC 58 NA Mus musculus 50 Trp63 ENSMUSG00000022510 ENSMUST00000115310,ENSMUST00000115306,ENSMUST00000040231 1 3 6 80 16 25886319 25886337 ATGCCTGGACTATTTCACG 59 25886381 25889107 AGACTTGCCAAATCATCCA 59 NA Mus musculus 50 Il1rap ENSMUSG00000022514 ENSMUST00000023156 1 1 2 110 16 26712251 26712269 AAGAGGAATTTGTGCTGCT 59 26712342 26714801 TCTCATCTGTGACAATTCCC 59 NA Mus musculus 50 Plec1 ENSMUSG00000022565 ENSMUST00000074834,ENSMUST00000076355,ENSMUST00000080857,ENSMUST00000076442,ENSMUST00000072692,ENSMUST00000023226 3 6 10 150 15 76024851 76025189 CTTATCAAGGCTCAGAGGC 59 76023866 76023884 CAATCTGCACATTCTGCAG 59 NA Mus musculus 50 Ptk2 ENSMUSG00000022607 ENSMUST00000080736 1 1 5 102 15 73112654 73113704 TCCAACGGATGAAATTAGTG 57 73104995 73105014 CTGAATCTCATAATCCCTGG 57 NA Mus musculus 50 Sidt1 ENSMUSG00000022696 ENSMUST00000047446,ENSMUST00000114652 3 2 3 81 16 44286511 44287370 GTTCAGAACATCATGTGTCC 58 44286449 44286467 CTTTCTTGGTCATGGACTG 58 NA Mus musculus 50 Eif4a2 ENSMUSG00000022884 ENSMUST00000115341,ENSMUST00000023599 2 2 3 82 16 23111961 23113250 TATTCACAGAATTGGCAGAG 57 23113293 23113313 GAATCCTCTTGTCTTCTTCAG 58 NA Mus musculus 50 Gtf2ird1 ENSMUSG00000023079 ENSMUST00000073161,ENSMUST00000100652,ENSMUST00000074114 3 3 7 82 5 134842754 134842772 ACTACAGGACATGAAGCTG 58 134839834 134842708 TTGGCATCATCCTCATCTG 59 NA Mus musculus 50 Mrps23 ENSMUSG00000023723 ENSMUST00000107916,ENSMUST00000024486 3 2 4 109 11 88018854 88023366 ATTCGAGCGAAATTCTTTGC 59 88023611 88023629 AGCTCTGTGTACTTCTCCA 59 NA Mus musculus 50 Synj2 ENSMUSG00000023805 ENSMUST00000080283,ENSMUST00000115789,ENSMUST00000115785 3 3 7 116 17 6035452 6035470 CAAGGGTCTTCTAAGCCAG 59 6035550 6037392 TAACATGGGCTTTCCTGTC 59 NA Nonspecific Mus musculus 50 Telo2 ENSMUSG00000024170 ENSMUST00000115181,ENSMUST00000024987 2 2 3 88 17 25244066 25244281 CCTCATACAGGTGCTTAAGG 59 25243997 25244015 TGATGTAACACTGCTGCTC 59 NA Mus musculus 50 Polr2d ENSMUSG00000024258 ENSMUST00000025106 1 1 1 70 18 31955017 31955035 GTCCAAAGCTCTGATTCCA 59 31955735 31955753 TGTCATCGAGAATCTGCTG 59 NA DesignNoJunction Mus musculus 50 2610110G12Rik ENSMUSG00000024426 ENSMUST00000051462 2 1 5 81 17 36041011 36041031 TGGAATTAAAGGCAGTAAGG 57 36040949 36040967 TTAGGGTGTTCTGAATTGC 57 NA Mus musculus 50 Spire1 ENSMUSG00000024533 ENSMUST00000091867 2 1 4 197 18 67712449 67747487 GAAACAGAGGTTATTGAATCCC 59 67712273 67712291 CTCTCCGTCTTCATCTTCC 59 NA Mus musculus 50 Tcof1 ENSMUSG00000024613 ENSMUST00000078036,ENSMUST00000097562,ENSMUST00000057579 1 3 3 107 18 60995551 60997559 GATGTCGAGGTGAAATCTC 57 60995462 60995480 ATTCCCTAACTTGGTAGGG 57 NA Mus musculus 50 Mphosph1 ENSMUSG00000024795 ENSMUST00000087341 1 1 2 80 19 35006167 35006186 TCATCTGATCAAGAGAAGGA 57 35006226 35008921 GTCATTATGTATGGTAACCTCC 58 NA Mus musculus 50 Sf1 ENSMUSG00000024949 ENSMUST00000113489,ENSMUST00000113487,ENSMUST00000113485,ENSMUST00000076351 3 4 4 83 19 6365718 6365736 AGAAGACAGTGATTCCAGG 58 6365781 6368372 GTAGTTGCACTATGTAAGCTC 58 NA Nonspecific Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000041717,ENSMUST00000111662,ENSMUST00000086848,ENSMUST00000061496,ENSMUST00000078917,ENSMUST00000111659,ENSMUST00000111651,ENSMUST00000111649,ENSMUST00000111653,ENSMUST00000111656 1 10 15 122 19 55817577 55817595 GATGGAGGGCTCTTTAAGG 59 55817680 55892265 CATCTGAAGATAGGTTCGGG 59 NA Mus musculus 50 Pdcd11 ENSMUSG00000025047 ENSMUST00000079007 3 1 2 113 19 47178262 47178285 TAAGAAAGCATTCAACGGC 58 47178361 47178536 CTGCAATAATTGATTTCCGC 58 NA Mus musculus 50 1700011F14Rik ENSMUSG00000025090 ENSMUST00000069419,ENSMUST00000026077 2 2 2 88 19 58586853 58586871 TCTGGAGTCCTTGTTTCAG 58 58586922 58587121 TAATCTCCGACCTTACTTCC 58 NA Mus musculus 50 Ercc5 ENSMUSG00000026048 ENSMUST00000027214 2 1 2 80 1 44231207 44232689 TTACAGTCAACTAGGACTGG 58 44232731 44232750 GGTATCCCTTCCGTATAGTC 58 NA Mus musculus 50 Ptp4a1 ENSMUSG00000026064 ENSMUST00000027232,ENSMUST00000076587 2 2 2 60 1 31001505 31001794 ATTCATGTTCTTGACTGGC 58 31001463 31001481 CATCGACAATCTGGTTGGA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Map4k4 ENSMUSG00000026074 ENSMUST00000088000 1 1 2 93 1 40068679 40070961 CTAATGAGACTCAGTCCGC 59 40071017 40071036 GAGATCTGTAGTAACCTGGG 58 NA Mus musculus 50 Cnga3 ENSMUSG00000026114 ENSMUST00000027288 3 1 1 60 1 37314917 37314935 TTAGACATGCTGGTTCGAG 59 37317555 37317574 TATCTCTGACCATTAGGCCT 59 NA DesignNoJunction Mus musculus 50 Atp2b4 ENSMUSG00000026463 ENSMUST00000112269,ENSMUST00000048953 1 2 5 80 1 135603565 135611643 GATTCAGACTCAGATCAGAGTC 59 135603506 135603524 ATGGAGCTACGATTCTTGG 59 NA Mus musculus 50 Dclre1c ENSMUSG00000026648 ENSMUST00000115066,ENSMUST00000100463,ENSMUST00000115067,ENSMUST00000061852 1 4 7 123 2 3374848 3375972 AAGATGAAAGGCTGTGGTC 59 3376059 3376077 CACAGCTACCCTTTACCTG 59 NA Mus musculus 50 4921504E06Rik ENSMUSG00000026734 ENSMUST00000028067 3 1 2 100 2 19415804 19415823 TATGCAACACATCAAACCAG 58 19415722 19415742 TTTCTTCGATGAGAACTCCT 58 NA Mus musculus 50 St6galnac6 ENSMUSG00000026811 ENSMUST00000113290,ENSMUST00000113282,ENSMUST00000095044,ENSMUST00000072111,ENSMUST00000081879 2 5 6 66 2 32464824 32467749 GAGTAGCAACAAAGAGCAG 58 32467779 32467797 GATGAGGATGGTGATGAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Dnm1 ENSMUSG00000026825 ENSMUST00000113357 1 1 9 131 2 32172519 32172817 GGAATTGCTTAAGGAGAAAGAG 59 32171422 32172427 TAGACATTCCTCTGCTCTG 58 NA Nonspecific Mus musculus 50 Dnm1 ENSMUSG00000026825 ENSMUST00000113350,ENSMUST00000113352,ENSMUST00000091089,ENSMUST00000113365,ENSMUST00000035664,ENSMUST00000002626 1 6 9 80 2 32190337 32191310 TATCCATGGCATCAGAACG 59 32190275 32190293 CGAATCTTCTTCACCTGCT 59 NA Mus musculus 50 Camsap1 ENSMUSG00000026933 ENSMUST00000114164 3 1 5 173 2 25808338 25810797 TATTGGAAGTTAGTACCCGT 57 25800780 25808204 CTTCAGACAGATATCATCCAG 57 NA Mus musculus 50 Neb ENSMUSG00000026950 ENSMUST00000075301,ENSMUST00000036934,ENSMUST00000100112 3 3 6 80 2 52005207 52006893 CATTAGCTCGGTTCTTTACTC 58 52005147 52005166 ATCTCTGGTGTATCTAGCAC 58 NA Mus musculus 50 Lrp2 ENSMUSG00000027070 ENSMUST00000080953 2 1 3 80 2 69281861 69286183 AAACTGGTTGCAATCTAGGA 59 69281800 69281818 CTCCATTGCTTAACTGGGT 59 NA Mus musculus 50 Atf2 ENSMUSG00000027104 ENSMUST00000112007,ENSMUST00000055833,ENSMUST00000090802,ENSMUST00000112017,ENSMUST00000112016,ENSMUST00000100009,ENSMUST00000112010,ENSMUST00000112002 3 8 10 80 2 73657202 73661273 AAGTCTGGCTATCATACTGC 59 73657141 73657159 GATCGCTTCTGTATGTGGA 59 NA Mus musculus 50 Sema6d ENSMUSG00000027200 ENSMUST00000103240,ENSMUST00000103239 3 2 9 101 2 124486489 124487949 CAACATCTGACATGGAGGT 59 124488014 124488032 TCGTCAGTTTAGGTCTCCA 59 NA Mus musculus 50 Vps39 ENSMUSG00000027291 ENSMUST00000102501 1 1 2 81 2 120172112 120172595 GCAGTTGTAACAGGTTTGAG 59 120171383 120172068 GAAACCACATGGATCTGCT 59 NA Mus musculus 50 Rrbp1 ENSMUSG00000027422 ENSMUST00000037875 1 1 5 132 2 143813900 143813918 GAAGAAGTCTGGTTCCAGG 59 143811808 143811826 TACAGGTGTTTCCAACGTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Epb4.1l1 ENSMUSG00000027624 ENSMUST00000069919,ENSMUST00000109574 3 2 12 119 2 156335032 156336478 GCCTTGATGGAGAGTTCTC 59 156336561 156336579 CTTCTTCAGCCTCTGATCG 59 NA Mus musculus 50 Gstm4 ENSMUSG00000027890 ENSMUST00000116285,ENSMUST00000029489,ENSMUST00000106670 2 3 3 80 3 107845105 107845123 GCACCTTATATTCGAACCC 57 107844233 107845061 CTCTTCAGTACCTCAAAGC 57 NA Mus musculus 50 Adar ENSMUSG00000027951 ENSMUST00000098924,ENSMUST00000107405,ENSMUST00000107404 1 3 4 92 3 89549514 89549750 TCCAAAGACACTTCCTCTC 58 89549806 89549824 TGGAAACTGTTGGTCAGAG 59 NA Mus musculus 50 Pet112l ENSMUSG00000028085 ENSMUST00000029726,ENSMUST00000107674 3 2 3 117 3 85440950 85440969 AAAGCAACAGAATCTTGCAG 59 85448961 85456211 CTCAAACACCTGCTTAGCT 59 NA Mus musculus 50 Pet112l ENSMUSG00000028085 ENSMUST00000029726 2 1 3 82 3 85456272 85456290 CTGATGCAGGATCAAGAGG 59 85456335 85457662 TTCTTCACATCCATCACCAC 59 NA Mus musculus 50 Casp8ap2 ENSMUSG00000028282 ENSMUST00000108177,ENSMUST00000108178 1 2 3 176 4 32718807 32718825 GCAGCAAATGAAAGACCTG 59 32721851 32735013 CGGTCATCATTTCTTTGGTG 59 NA Mus musculus 50 Cga ENSMUSG00000028298 ENSMUST00000108130,ENSMUST00000029975 1 2 2 81 4 34851346 34852335 ATTATTCAGGGTTGCCCAG 59 34852380 34852398 CCATACACTGGTAGATGGG 58 NA Mus musculus 50 Clta ENSMUSG00000028478 ENSMUST00000107845,ENSMUST00000107846,ENSMUST00000107851,ENSMUST00000107849,ENSMUST00000107847,ENSMUST00000078664 1 6 6 84 4 44031711 44032752 GAATACTACCAGGAGAGCA 57 44032800 44032818 TACTTTCAGGCTCTGACTG 58 NA Mus musculus 50 Sgip1 ENSMUSG00000028524 ENSMUST00000102775,ENSMUST00000106882,ENSMUST00000080728,ENSMUST00000097946 3 4 9 114 4 102591451 102593635 GTTGCAACAGGAAATGACC 59 102593713 102593731 TAACAGCAACAGACTTGGG 59 NA Nonspecific Mus musculus 50 St3gal3 ENSMUSG00000028538 ENSMUST00000106414 2 1 5 189 4 117631104 117631124 AGCAATATGAACGAGACTCTC 59 117613092 117630044 CCATCAGATGCACTCTGAG 59 NA Mus musculus 50 Laptm5 ENSMUSG00000028581 ENSMUST00000102577,ENSMUST00000030316 2 2 2 87 4 130485381 130485399 GTTTGAGTATCCTGACCCT 58 130485450 130486696 GGGAGGTAATTCATGTGGT 58 NA Mus musculus 50 Bst1 ENSMUSG00000029082 ENSMUST00000101237 1 1 2 82 5 44231719 44233243 ATCATGAACTCAGCCTCAG 59 44233289 44233307 AGAGAAATGAGAAGGCTGG 58 NA Mus musculus 50 Stx18 ENSMUSG00000029125 ENSMUST00000031008,ENSMUST00000114126 3 2 3 179 5 38496215 38497804 ATCAACTCAGAACAGAAGCC 59 38498128 38507340 CAGGTTCCAGCTTAGATAGTC 59 NA Mus musculus 50 Epha5 ENSMUSG00000029245 ENSMUST00000051774 2 1 8 80 5 84495001 84535800 CTTATGAAGATCCCACATACCA 59 84494942 84494961 GTACCCTGTTACCTTTCCTG 59 NA Mus musculus 50 Rest ENSMUSG00000029249 ENSMUST00000080359,ENSMUST00000113449 3 2 3 82 5 77704279 77704299 GAACTTTGTCCTTACTCAAGC 59 77704340 77709746 CATTTAAATGGCTTCTCACCTG 59 NA Mus musculus 50 Klhl8 ENSMUSG00000029312 ENSMUST00000112815,ENSMUST00000112811,ENSMUST00000031254,ENSMUST00000112817 1 4 4 80 5 104296668 104296880 GCTCTGTGGCTTTAATAAACC 59 104296608 104296626 GATACCTCTCCACACTGGA 59 NA Mus musculus 50 Zfp12 ENSMUSG00000029587 ENSMUST00000075916,ENSMUST00000077485 3 2 2 96 5 143997982 144001637 TGAATACATCCTTAGGCCC 58 144001697 144001715 TATGTCGTCCTTTCCTCAG 58 NA Mus musculus 50 Zyx ENSMUSG00000029860 ENSMUST00000070635 2 1 2 86 6 42301291 42301309 TTGACCTGGAGATTGACTC 58 42301359 42301489 CATATCCGGATGATACCCG 59 NA Mus musculus 50 Rad52 ENSMUSG00000030166 ENSMUST00000032269 3 1 2 176 6 119870879 119870899 TCATTAAGCCCTTGTGTAGAG 59 119871037 119872501 GTTCAGAGTCTCTGCTACC 59 NA Mus musculus 50 Plcz1 ENSMUSG00000030230 ENSMUST00000032356 2 1 2 80 6 139964659 139964678 CATGGTTACACATTCACCAG 58 139962204 139964616 ATCAGATGTCACAAAGGCA 59 NA Mus musculus 50 Plekha5 ENSMUSG00000030231 ENSMUST00000087622 1 1 3 89 6 140512126 140512144 CAATGATTGAGAACTCGGC 58 140517392 140517883 CTTGTGACAGACAATAGAGAC 58 NA Mus musculus 50 Ttyh1 ENSMUSG00000030428 ENSMUST00000032594,ENSMUST00000079415,ENSMUST00000086397,ENSMUST00000108591 3 4 5 86 7 4084819 4085282 GGAATCCAAACGCTTTGTG 59 4085332 4085477 AGGAAAGGAGCATAGAGGA 59 NA Mus musculus 50 Tdrd12 ENSMUSG00000030491 ENSMUST00000108043 3 1 2 81 7 36254986 36255086 TAGAGTCATCTTCAGTGCC 58 36254923 36254943 GTCATCTTTCCTTATGTCACC 58 NA Mus musculus 50 2610020H08Rik ENSMUSG00000030924 ENSMUST00000084644 2 1 2 67 7 126969143 126970825 GCCAAAGAAGATTGCAGAG 59 126970856 126970874 CTTCCTTGTCTCCTTGCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 4631426J05Rik ENSMUSG00000030930 ENSMUST00000077472,ENSMUST00000080215 2 2 2 82 7 139454421 139454439 CTGACCCAAGACTTCATCC 59 139439695 139454375 GAGTACAACCTCTCCACAG 59 NA Mus musculus 50 Smarca1 ENSMUSG00000031099 ENSMUST00000101616,ENSMUST00000077569,ENSMUST00000088973 1 3 6 80 X 45211481 45211499 TTATTGTATGTGGCGTGGT 59 45207882 45211437 GCATCTATCGCTTCCTCTC 59 NA Mus musculus 50 Enox2 ENSMUSG00000031109 ENSMUST00000114912,ENSMUST00000114916 1 2 6 90 X 46366736 46366754 ATCTCCACATTCCTTCACG 59 46364802 46366685 TGGTGCTGATCTTATTATCGAG 59 NA Mus musculus 50 Cacna1f ENSMUSG00000031142 ENSMUST00000115725 2 1 4 86 X 7204032 7205043 AAGTCAATAGTTCAGAGGACAG 59 7205090 7205108 TACTCAGAAGCTTGACCAG 58 NA Mus musculus 50 Otc ENSMUSG00000031173 ENSMUST00000049910 2 1 2 98 X 9889567 9889585 AGAAAGCCAGAAGAAGTGG 59 9889647 9896977 CATGACAGCCATGATTGTC 58 NA Mus musculus 50 Rpgr ENSMUSG00000031174 ENSMUST00000044789 3 1 13 169 X 9646678 9650902 ATATAAAGACACTCCGTGGTG 59 9646529 9646547 TGTTTGACTGGCAGATGAG 59 NA Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112408,ENSMUST00000112406 2 2 10 121 X 156876221 156876240 GTCATTCTCGTTACATCCCT 59 156896812 156899290 ACTTCTGAAGCAGCATCTG 59 NA Mus musculus 50 Arhgap4 ENSMUSG00000031389 ENSMUST00000114405,ENSMUST00000114407,ENSMUST00000114406,ENSMUST00000114398,ENSMUST00000064376,ENSMUST00000114404 2 6 7 93 X 71145512 71145625 TATATTACGAAGCTGCAGGA 58 71145438 71145456 CTTGTTGTATGGCTTCCTG 58 NA Mus musculus 50 Irak1 ENSMUSG00000031392 ENSMUST00000114352,ENSMUST00000068286,ENSMUST00000114360,ENSMUST00000114339,ENSMUST00000033769,ENSMUST00000114354,ENSMUST00000114353,ENSMUST00000073369,ENSMUST00000101458 1 9 13 80 X 71267296 71267536 AACAGCTATCAAGGTTTCGT 59 71267235 71267254 AAACAAGGCAGTATAAGCCA 59 NA Mus musculus 50 Cadm1 ENSMUSG00000032076 ENSMUST00000034581 2 1 5 169 9 47622020 47656261 ATGTATACGATTCTCGAGCAG 59 47658365 47658383 TCCTTTGGCTTCATGAGTG 59 NA Mus musculus 50 Tmed1 ENSMUSG00000032180 ENSMUST00000034698,ENSMUST00000098951 1 2 2 96 9 21313444 21313462 CAGCTTCCAAGATGAGGAG 59 21312827 21313387 TATGGATTCCTTGATGTCTTCC 59 NA Mus musculus 50 Lca5 ENSMUSG00000032258 ENSMUST00000034793,ENSMUST00000113217 3 2 3 100 9 83292191 83292210 GATGCTAAGTTCAGTGTTGG 58 83285472 83292129 AAAGATTACCACTCTCAGGC 59 NA Mus musculus 50 2310046O06Rik ENSMUSG00000032305 ENSMUST00000114200 1 1 2 72 9 57387075 57387093 TATTCCTCCGGGTATTCCT 59 57388489 57388507 GATATCCATCCTGCAGCAG 59 NA DesignNoJunction Mus musculus 50 Mtap4 ENSMUSG00000032479 ENSMUST00000065171 3 1 3 150 9 109971355 109971373 ACTTCCACTAAGCCTAGCT 59 109971487 109980522 TGTTCTGAATCTGAACCCG 59 NA Mus musculus 50 Centd2 ENSMUSG00000032812 ENSMUST00000107011,ENSMUST00000107010,ENSMUST00000098246,ENSMUST00000084896,ENSMUST00000084895 2 5 6 82 7 108535359 108535623 TTTGACAGTAACAAGGACG 57 108535669 108535687 TTCTGGTCTCCAATAGGAG 57 NA Mus musculus 50 Foxj3 ENSMUSG00000032998 ENSMUST00000106310 3 1 2 84 4 119275029 119275047 ATAGACACCAATCCGAAGG 58 119275095 119289128 CGTTGTACAATGTTACCCG 58 NA Mus musculus 50 Polr2f ENSMUSG00000033020 ENSMUST00000040077 2 1 1 88 15 78975039 78975057 CTTTGATGACGTTGAGGAG 58 78976498 78976516 CAGATGGGAGAATCTCGAC 59 NA DesignNoJunction Mus musculus 50 Pik3c3 ENSMUSG00000033628 ENSMUST00000115812,ENSMUST00000091978 3 2 2 82 18 30484209 30484230 GTGATTACGTACATTCTTGGAG 58 30484270 30492833 TCTATATGGAAGAGTTTGCCTG 59 NA Mus musculus 50 Mapkbp1 ENSMUSG00000033902 ENSMUST00000102506 1 1 2 84 2 119838755 119838773 TTTCTGTATCACGTCGTCG 59 119838821 119839045 GTCTGTGTTCCTTAGCTCC 59 NA Mus musculus 50 Edil3 ENSMUSG00000034488 ENSMUST00000081769,ENSMUST00000043111 1 2 2 80 13 89316897 89319850 GAAGAGATGGTCTTTCGTG 57 89319894 89319912 ATACTGAGCTTTGATTGGG 57 NA Mus musculus 50 Ankrd12 ENSMUSG00000034647 ENSMUST00000038116,ENSMUST00000086699 1 2 2 87 17 66373468 66373486 AGAGACAGAGGAGTTGGAG 59 66336817 66373418 CTGAGCCTCTTCTGAATCTG 59 NA Mus musculus 50 Tmem106a ENSMUSG00000034947 ENSMUST00000100403,ENSMUST00000039581 3 2 3 129 11 101450194 101450213 TTCTATCCCATCACAGTGAC 58 101450305 101450427 CAACTTCGTAAGGCATCTG 58 NA Mus musculus 50 Dennd1a ENSMUSG00000035392 ENSMUST00000102787,ENSMUST00000090997,ENSMUST00000040406 2 3 3 81 2 37656762 37657544 TGATTACCAGAGACTGGAC 57 37656699 37656718 AGTATATGGATGAGCAAGCT 58 NA Mus musculus 50 6330514A18Rik ENSMUSG00000035486 ENSMUST00000105351,ENSMUST00000039836 1 2 2 162 10 79823078 79823098 CAAGATGACTTCTTCAGTCAG 58 79823308 79823445 TTGAGGTAAAGGGACAAGG 58 NA Mus musculus 50 Reep6 ENSMUSG00000035504 ENSMUST00000105358,ENSMUST00000105355,ENSMUST00000105354 3 3 3 81 10 79796269 79796289 TGTATCTTCTGTTCGGTTACG 59 79796331 79796442 GCTTTGACTGAAGCATATGC 59 NA Nonspecific Mus musculus 50 1700021K19Rik ENSMUSG00000035629 ENSMUST00000089684,ENSMUST00000040986,ENSMUST00000115105 1 3 3 112 16 32836096 32836508 ACTGAGAATGGAAGCTTCC 59 32836002 32836020 TGGATTTCCAAGTCGTCAG 59 NA Mus musculus 50 Krt222 ENSMUSG00000035849 ENSMUST00000103132,ENSMUST00000038214 3 2 2 165 11 99097784 99097802 AAGTTGGCTTTCTTCTCCC 59 99096453 99097460 TTCTCTGTCTGAATGGTGC 59 NA Mus musculus 50 Palm ENSMUSG00000035863 ENSMUST00000046945 3 1 2 137 10 79277978 79279546 TGAAAGCAGCCATGTACTC 59 79279647 79279665 TTGTTTCGTCCTCGTAGAC 59 NA Mus musculus 50 H2-Q1 ENSMUSG00000035929 ENSMUST00000113887 1 1 3 107 17 35516594 35516612 GTCAACAATGCTGCTTCTG 59 35516858 35516879 GAGGTGTAGAAATAACTCAGCA 59 NA DesignNoJunction Mus musculus 50 Lin37 ENSMUSG00000036845 ENSMUST00000043975 2 1 2 157 7 31342976 31344479 GTGAAAGTGGAGAAATCAGAG 58 31342302 31342652 ATGGAACAATCCTTGTTGTG 58 NA Mus musculus 50 Fbxo27 ENSMUSG00000037463 ENSMUST00000039998,ENSMUST00000108282,ENSMUST00000108281,ENSMUST00000108280 1 4 4 139 7 29481780 29483262 GATATCTACCTGCAGGTCAC 59 29483364 29483382 ATGATCACACTGGAGTTCG 59 NA Mus musculus 50 Wdtc1 ENSMUSG00000037622 ENSMUST00000105906 3 1 2 184 4 132851243 132852345 CAATTTCTTTGGCAGGAGAC 59 132850266 132850284 ATATCTTCCACAACTCGGC 59 NA Mus musculus 50 BC061194 ENSMUSG00000037708 ENSMUST00000095132 2 1 2 89 2 18654785 18655744 AAACATACACCAGAGCTCTC 59 18655796 18655814 TATGTTCCCTTTGCAGGAC 59 NA Mus musculus 50 Zfp384 ENSMUSG00000038346 ENSMUST00000100948,ENSMUST00000112427,ENSMUST00000088308,ENSMUST00000084275,ENSMUST00000112424 2 5 6 74 6 124983328 124985740 AATCTGCAGTCTCACAGAC 59 124985778 124985796 TGTATATGCTCGGTGACAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Picalm ENSMUSG00000039361 ENSMUST00000049537,ENSMUST00000107224 2 2 3 89 7 97330798 97330816 GTAGTGGTGATGTTCACCT 58 97330866 97337668 GACTGAATCCAACAAACATCTC 59 NA Mus musculus 50 5730528L13Rik ENSMUSG00000039693 ENSMUST00000061135,ENSMUST00000064807,ENSMUST00000107704 3 3 4 85 4 48565639 48565657 CTGTACTTCCTTCAGAGCC 59 48573718 48573737 CGATTTGAAACAGCAAAGGA 59 NA DesignNoJunction Mus musculus 50 4931408A02Rik ENSMUSG00000039903 ENSMUST00000099543 3 1 3 103 16 90876346 90876366 AAGTTCCTCAACATCTACTCC 59 90876431 90894835 ATGTTCTTGGGAACGAAGG 59 NA Mus musculus 50 Ipo8 ENSMUSG00000040029 ENSMUST00000048418 2 1 2 141 6 148759219 148759237 GAAGTGTAAGAAGTGGGCT 59 148755033 148758414 TAGTAGTACCTGTTGAATTCCC 58 NA Mus musculus 50 Lyrm5 ENSMUSG00000040370 ENSMUST00000111725,ENSMUST00000039729,ENSMUST00000111724,ENSMUST00000111726,ENSMUST00000111723,ENSMUST00000111721,ENSMUST00000111719 3 7 7 137 6 145163762 145163780 CGAGGAGAAGTACTGACTC 58 145163960 145163978 TTTGATCTTCTCTGGGTCC 58 NA DesignNoJunction Mus musculus 50 Gyltl1b ENSMUSG00000040434 ENSMUST00000068586,ENSMUST00000090582,ENSMUST00000043868,ENSMUST00000111284 2 4 4 80 2 92205831 92205849 TATGATCCTCGCTTTGTGG 59 92205638 92205789 CAGGAATTCATATTCCTGAGC 58 NA Mus musculus 50 C1qtnf4 ENSMUSG00000040794 ENSMUST00000111466,ENSMUST00000036860 3 2 2 62 2 90730391 90730409 CTACTTAGCCACGATCACG 59 90730435 90730453 GAAAGTGATGTACTTGCCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sp9 ENSMUSG00000041762 ENSMUST00000112043,ENSMUST00000076463,ENSMUST00000112042,ENSMUST00000048504 2 4 6 113 2 73208045 73208063 ATTATCAGCCTGGTCTCCT 59 73205647 73206382 AACAATAGTCTGAGCGATGAG 59 NA Mus musculus 50 1810015A11Rik ENSMUSG00000041774 ENSMUST00000115706 1 1 3 90 16 17155141 17158603 AACTGCAGCTGATATAGCC 59 17158657 17158675 CTGGCTAGGTACTTGACTC 58 NA InUTR Mus musculus 50 4833418A01Rik ENSMUSG00000041966 ENSMUST00000064155,ENSMUST00000112167,ENSMUST00000038143,ENSMUST00000064141 3 4 6 87 2 70926486 70926504 CTCACCTGGATTTCCACTG 59 70926553 70927859 TCATGGCTATATGTCACATCC 59 NA Mus musculus 50 Prdm10 ENSMUSG00000042496 ENSMUST00000074510 2 1 2 80 9 31178447 31178465 TTTGTGATCACAGACAGTG 57 31178509 31185939 TAACACATAATGACCCGGA 57 NA Mus musculus 50 Obfc1 ENSMUSG00000042694 ENSMUST00000086929 1 1 3 88 19 47582354 47583218 TCTTGTAACCACCAAAGAC 57 47576196 47582302 CCTTCTCCATATGGTTTGG 57 NA Mus musculus 50 Foxo4 ENSMUSG00000042903 ENSMUST00000096359 1 1 3 60 X 98451501 98451519 TAGACGTTAGAGTGAGGGA 58 98451543 98451561 ATCTTCTGTTCAGTCTGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zbtb37 ENSMUSG00000043467 ENSMUST00000064713,ENSMUST00000111630,ENSMUST00000111629 1 3 3 91 1 162959861 162961943 GTTGACAGATTTAGTCCCTC 57 162959789 162959807 TTAGGCTCATCCATTCTCC 58 NA Mus musculus 50 Klhl15 ENSMUSG00000043929 ENSMUST00000113916,ENSMUST00000113915 1 2 5 80 X 91498434 91498452 GTCTGATGACTCCATCCAG 59 91517725 91517743 CTTCATATCGGAGCTGTCG 59 NA DesignNoJunction Mus musculus 50 Fmn1 ENSMUSG00000044042 ENSMUST00000099576,ENSMUST00000081349 1 2 6 85 2 113436540 113443334 CTATGATCAGGAAGCTGGA 58 113443383 113443401 CAAACTTGACTTGAGAGGC 58 NA Mus musculus 50 Suv420h1 ENSMUSG00000045098 ENSMUST00000113973,ENSMUST00000113972,ENSMUST00000113968,ENSMUST00000052699,ENSMUST00000113970,ENSMUST00000113967 3 6 9 128 19 3793168 3793188 GGTTCTTGATCCCTACTTAGG 59 3796702 3802086 ATAGGCCGAAATCTCACAG 59 NA Mus musculus 50 Dpy19l4 ENSMUSG00000045205 ENSMUST00000053522 1 1 3 152 4 11217429 11219711 AAAGTGACAAGCTGAATGG 58 11216848 11216866 GAAATTTCAGCACATGCTC 57 NA Mus musculus 50 Trrap ENSMUSG00000045482 ENSMUST00000060830,ENSMUST00000100467 2 2 4 82 5 145532110 145532487 TGAATACACCTGATGAAACG 57 145537977 145537995 ATACTGAGGAGATGACGTG 58 NA Mus musculus 50 Trrap ENSMUSG00000045482 ENSMUST00000060830,ENSMUST00000100467 3 2 4 82 5 145532111 145532488 GAATACACCTGATGAAACGA 57 145537978 145537996 AATACTGAGGAGATGACGT 57 NA Mus musculus 50 BC107364 ENSMUSG00000046317 ENSMUST00000093126,ENSMUST00000098841,ENSMUST00000059728 3 3 3 83 3 96244776 96245975 TTACTCGCCTGTCTAAACAG 59 96244712 96244730 CTTTGTTTGGGTCAAGGAC 58 NA Mus musculus 50 2310010M20Rik ENSMUSG00000046345 ENSMUST00000093183 1 1 1 226 16 32271717 32271736 TGATATCCTTGAAGGAAGCA 58 32273829 32273847 GACCTCGATGACATAGCTG 59 NA DesignNoJunction Mus musculus 50 Mapk10 ENSMUSG00000046709 ENSMUST00000056348,ENSMUST00000086854 2 2 7 99 5 103395638 103405383 GGCACTGATCATATTGACCA 59 103395558 103395576 CGTAGTTTCTGACTGTGGG 59 NA Mus musculus 50 Spesp1 ENSMUSG00000046846 ENSMUST00000056949 2 1 1 60 9 62120367 62120386 TTAAGCGTGTACCATCAGAG 59 62120326 62120345 TTTCTCAACTCAGCATTCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr26 ENSMUSG00000047667 ENSMUST00000058789 1 1 1 60 9 38663286 38663305 CTGTTGCTATCTCCTATGTC 57 38663327 38663346 CCCTTTGATGACTTGATGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxw10 ENSMUSG00000047821 ENSMUST00000072639 1 1 4 91 11 62654168 62654186 AAATAGCTTCTCCTGGAGC 59 62654241 62664086 TCATCATGAAGGCCTTGAG 59 NA Mus musculus 50 1810044A24Rik ENSMUSG00000047921 ENSMUST00000089770,ENSMUST00000023276 2 2 3 80 15 72755987 72756007 CTTTCACCATCAACATCAAGG 59 72734103 72755946 TGATTCCATCATCACTCAGG 59 NA Mus musculus 50 Gpr85 ENSMUSG00000048216 ENSMUST00000060442 1 1 3 179 6 13787061 13788006 TATTCCAGATGTTCTGATGGC 59 13786902 13786923 ATAGATGGATGGAGGATAAGGA 59 NA InUTR Mus musculus 50 Zdhhc22 ENSMUSG00000048483 ENSMUST00000057205,ENSMUST00000095521 1 2 2 60 12 88324408 88324426 AACTTACAGGAGGTCTTCG 58 88324366 88324384 CATTGAACATGGGTACCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nhlh2 ENSMUSG00000048540 ENSMUST00000066187,ENSMUST00000055860 1 2 2 60 3 101816907 101816925 AAGAAGCTCTCCAAGATCG 59 101816947 101816967 GGTTGAGATAGGAGATGTAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A730037C10Rik ENSMUSG00000048655 ENSMUST00000052904,ENSMUST00000061099 1 2 2 85 3 54954670 54954688 AGCTGAATGACCAATTGGA 59 54954736 54954837 AGACAGTCTATCTGAAGGGT 59 NA Mus musculus 50 Zfp2 ENSMUSG00000049321 ENSMUST00000116378,ENSMUST00000077686 1 2 5 97 11 50724024 50724223 CATATGGAATACACAGGGCA 59 50723946 50723964 ATGCAACCTGGGAATTCTC 59 NA InUTR Mus musculus 50 Otop1 ENSMUSG00000051596 ENSMUST00000063136,ENSMUST00000114099 3 2 2 84 5 38685774 38689101 AAACACTGGAAAGGTTTGG 58 38689148 38689167 TGCTTTGATTCATTCAGGAC 58 NA Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000099981,ENSMUST00000111882,ENSMUST00000111846,ENSMUST00000111843 3 4 14 80 2 76726141 76726957 AGCTCAGTGTGAAAGAACC 59 76726079 76726097 GTTGGATGGATTCTCCCTG 59 NA Mus musculus 50 Foxo6 ENSMUSG00000052135 ENSMUST00000102656,ENSMUST00000063846 1 2 2 123 4 119959466 119959484 TCAAGGATAAAGGCGACAG 59 119941705 119941723 ATCCACCATGAACTCTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A630001G21Rik ENSMUSG00000052760 ENSMUST00000064788 2 1 2 86 1 87615696 87619682 TATGAGCAAGGGACAAACC 59 87615628 87615646 TATCTCTGGCTCCTGTAGG 59 NA Mus musculus 50 Tcf4 ENSMUSG00000053477 ENSMUST00000114985,ENSMUST00000114982,ENSMUST00000078486,ENSMUST00000114980 3 4 7 107 18 69508790 69621526 CTGGCTCAAATGTAGAAGAC 58 69625023 69625041 TAGTCATGTGGTCATAGGG 57 NA Mus musculus 50 Trim65 ENSMUSG00000054517 ENSMUST00000106440,ENSMUST00000067632 3 2 2 80 11 115988921 115989024 CATCTTCTTCCAGGAATTACAG 58 115988862 115988880 TCTTCATTCCACTGTGGAG 58 NA Mus musculus 50 Emcn ENSMUSG00000054690 ENSMUST00000106260 1 1 4 102 3 137042874 137079702 GAAGTTACTACTCAACTACTGG 57 137079765 137080018 CCTCAGTATCTTGAAGCAG 57 NA Mus musculus 50 Mta3 ENSMUSG00000055817 ENSMUST00000112344,ENSMUST00000097277 3 2 6 88 17 84203923 84217705 ACAATGGTCTAGATGCCTC 58 84217757 84217775 TTCTAGTTGCAGGCTTCTG 59 NA Mus musculus 50 H2-T9 ENSMUSG00000056116 ENSMUST00000077960,ENSMUST00000058801,ENSMUST00000080015 1 3 3 104 17 36175993 36176133 GTGGATGATGAGGAGATGG 59 36175699 36175717 AGGTGACAGTAAAGACTCG 58 NA Nonspecific Mus musculus 50 4930458L03Rik ENSMUSG00000056223 ENSMUST00000070216 3 1 1 115 13 65021063 65021084 GGAATCATTGTAGGAATGATGC 59 65021674 65021692 AGAGTTCAAATGGTGTCCT 58 NA DesignNoJunction Mus musculus 50 Dennd1b ENSMUSG00000056268 ENSMUST00000071518 1 1 3 83 1 141022716 141030260 CTGCCTATGTTTATTGATGGTC 59 141030303 141030322 CGAAGTGATCTCTTCTTCGA 59 NA Mus musculus 50 Actr3b ENSMUSG00000056367 ENSMUST00000088244 1 1 2 80 5 25304308 25315609 TTATCCCGTCATGTATCGC 59 25315653 25315671 CATCGACTCCTCTCAACAC 59 NA Mus musculus 50 Sh2d3c ENSMUSG00000059013 ENSMUST00000074248,ENSMUST00000113242,ENSMUST00000113240 2 3 3 108 2 32600305 32600323 CAGAGAAACTGCACAAGGA 59 32600395 32601368 AGAGTCTCAGAGACCTCAC 59 NA Mus musculus 50 Pde1a ENSMUSG00000059173 ENSMUST00000102654,ENSMUST00000102655,ENSMUST00000102653,ENSMUST00000090756,ENSMUST00000102651,ENSMUST00000102652 3 6 7 81 2 79728094 79737237 TCATACAGGTATCATGCACTG 59 79728033 79728053 GTGCTCATAATCATGAATGGC 59 NA Mus musculus 50 Rgs3 ENSMUSG00000059810 ENSMUST00000084521,ENSMUST00000107430 2 2 10 135 4 62313749 62313767 AGGCAGAGTGCTTATTCAC 59 62313864 62350546 TCTGTCTCAAACATCTTCCTC 59 NA Mus musculus 50 Rpl35a ENSMUSG00000060636 ENSMUST00000115079,ENSMUST00000078804,ENSMUST00000115078,ENSMUST00000115076 1 4 5 127 16 33057250 33057479 AAGTATGTCTGGAAGGCTG 58 33057570 33057588 AGAACTCCGTTTCATCTCG 59 NA Nonspecific, InUTR Mus musculus 50 Slc4a4 ENSMUSG00000060961 ENSMUST00000113216 3 1 5 81 5 89467571 89467590 GGACATGTATGGAGAAAGGA 58 89467634 89469398 GATTCTCCCAACAACTCCA 59 NA Mus musculus 50 Cxcl12 ENSMUSG00000061353 ENSMUST00000112866,ENSMUST00000073043,ENSMUST00000112871 3 3 3 74 6 117121583 117121602 ATCCTCAACACTCCAAACTG 59 117123531 117123549 GTCAATGCACACTTGTCTG 59 NA DesignNoJunction Mus musculus 50 Sphk1 ENSMUSG00000061878 ENSMUST00000106388,ENSMUST00000106387,ENSMUST00000100201,ENSMUST00000106386,ENSMUST00000063396,ENSMUST00000063446,ENSMUST00000100200 1 7 8 108 11 116396301 116396397 AACTGATACTCACCGAACG 59 116396469 116396487 TCATGCATCAGACCATCAC 59 NA Mus musculus 50 Zfp13 ENSMUSG00000062012 ENSMUST00000115516 1 1 2 217 17 23718211 23718229 TAATGTGCAACACTGTGGA 59 23717818 23718030 GAGAAGGAACAACTCCACC 59 NA DesignRelaxed Mus musculus 50 Qk ENSMUSG00000062078 ENSMUST00000115697 2 1 4 184 17 10409178 10409197 GATCAGACAAATACAGACCG 58 10407048 10409031 GGAAAGCCATACCTAACAC 57 NA Mus musculus 50 BC062127 ENSMUSG00000062540 ENSMUST00000076281 1 1 1 88 10 81369239 81369257 TACAGAGATGTGATGCTGG 58 81368368 81368386 CTGATACTCACAAGGCTGG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 OTTMUSG00000000651 ENSMUSG00000062551 ENSMUST00000110335,ENSMUST00000054932,ENSMUST00000099658,ENSMUST00000110331 2 4 5 115 13 27947095 27947114 ATTATTCTAAAGTGCCTGGG 57 27947191 27948324 CAGAAGAGCTTCATAGTGTG 57 NA Mus musculus 50 Ufc1 ENSMUSG00000062963 ENSMUST00000080001,ENSMUST00000111302 3 2 2 176 1 173219721 173220030 CGACATCGAGTTTGAAATTCC 59 173219309 173219327 GCCATGAGATGAGCTAGTC 59 NA Mus musculus 50 Ldha ENSMUSG00000063229 ENSMUST00000048209,ENSMUST00000005051 1 2 3 80 7 54105650 54105669 TCTTCAAGTTCATCATTCCC 57 54105711 54106263 AGATATCCACTGGATTGGAG 58 NA Nonspecific Mus musculus 50 Rpl27 ENSMUSG00000063316 ENSMUST00000085947 1 1 3 80 11 101304959 101304977 AACTACAACCACCTCATGC 59 101305305 101306543 CACAGAGTACCTGAAACCC 59 NA Mus musculus 50 Cd209b ENSMUSG00000065987 ENSMUST00000084086,ENSMUST00000084085 3 2 3 83 8 3918823 3919965 CTACTCTGTCATCCAGATTCC 59 3918760 3918778 CAGCAAATTCGACACAGTC 59 NA Mus musculus 50 Aurkaip1 ENSMUSG00000065990 ENSMUST00000105592,ENSMUST00000105591,ENSMUST00000084097 2 3 3 169 4 155206831 155206849 CAAGTACCGTAAACTGGTC 57 155207075 155207093 TCTTCAGGTAGATCTTCGG 57 NA DesignNoJunction Mus musculus 50 BC023744 ENSMUSG00000066894 ENSMUST00000111967,ENSMUST00000086464 3 2 3 102 5 117794009 117798308 GTTGAGTGTGAAAGAACCG 58 117798373 117798392 GTAATACAGAGTGAGGCCTG 59 NA Mus musculus 50 Col4a4 ENSMUSG00000067158 ENSMUST00000087050 3 1 2 82 1 82481029 82482164 GACCTAAAGGATACAAAGGTG 58 82480967 82480985 TTGGTATCCAGGACTACCT 58 NA Mus musculus 50 Rex2 ENSMUSG00000067919 ENSMUST00000105725,ENSMUST00000105724 3 2 4 190 4 146348142 146404666 GGATCCAGTACAACATCTG 57 146429709 146429729 CGTCCTTGAAGGTTAATAGAC 58 NA InUTR Mus musculus 50 2310035K24Rik ENSMUSG00000068264 ENSMUST00000089506 1 1 4 135 2 131038352 131038373 GGTATACTCTCCTTAGGTTTCG 59 131038469 131038576 CAGATCCTGGACAAACTGG 59 NA Mus musculus 50 Psrc1 ENSMUSG00000068744 ENSMUST00000102630,ENSMUST00000090561,ENSMUST00000102629 1 3 3 80 3 108188316 108189219 GCATAAAGAAGGAATCACCC 58 108189262 108189280 GAATTGGTTGTGCAAGAGG 59 NA Mus musculus 50 Pde7a ENSMUSG00000069094 ENSMUST00000091314 2 1 2 82 3 19160286 19164832 GATCACCTCTAAGAGACGTG 59 19156853 19160241 GGACATCTCCTAGCATACG 59 NA Mus musculus 50 Ganab ENSMUSG00000071650 ENSMUST00000096246,ENSMUST00000096247 3 2 2 81 19 8989689 8989709 CTTTAACTATCAGACTCGCCA 59 8989752 8989903 GTCTGCTGAACTAGAGACC 59 NA Mus musculus 50 4932430I15Rik ENSMUSG00000072828 ENSMUST00000101028 1 1 1 60 5 93237718 93237736 CGCTTGATTCAAGTTTGGT 58 93237676 93237697 CTATGGTTACTGTTAAGCTGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ceacam1 ENSMUSG00000074272 ENSMUST00000098668,ENSMUST00000098672 1 2 4 102 7 26257088 26261376 ATTTCATGTACACCAGCCA 59 26257004 26257022 AATGTCATTCGACAAGCAG 58 NA Mus musculus 50 OTTMUSG00000021867 ENSMUSG00000074398 ENSMUST00000098839,ENSMUST00000107095 2 2 2 140 3 96361304 96361322 CCGATATGCTCCTATTGCA 59 96359957 96359975 CTCCACTTCTAAGGCATCG 59 NA DesignNoJunction, InUTR Mus musculus 50 Sirpb1 ENSMUSG00000074677 ENSMUST00000108352,ENSMUST00000050623,ENSMUST00000108350,ENSMUST00000108349 2 4 4 60 3 15732458 15732940 CTGAGTTCATTCAAGTTCCA 57 15732417 15732435 TTCCATACCATTGTTGGCT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Scn9a ENSMUSG00000075316 ENSMUST00000112358 3 1 4 111 2 66404310 66404328 AAAGGGAAAGCAATCTTCC 57 66403914 66404235 TGCTGAATAATGAGTGCAC 58 NA Mus musculus 50 Scn9a ENSMUSG00000075316 ENSMUST00000100063,ENSMUST00000100064,ENSMUST00000112354 3 3 4 81 2 66404272 66404290 TTTGTACATGCTGTCTCCC 59 66403906 66404230 GATTAGCATGCTGAATAAGGAG 58 NA Mus musculus 50 IGHV5-2 ENSMUSG00000076633 ENSMUST00000103442 2 1 1 60 12 114816839 114816858 TAATAGTGATGGTGGTAGCA 57 114816798 114816816 GGAGATGATGAATCGTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Eif5a ENSMUSG00000078812 ENSMUST00000071026,ENSMUST00000070996,ENSMUST00000043419,ENSMUST00000108612,ENSMUST00000108611,ENSMUST00000108610,ENSMUST00000108613,ENSMUST00000108609,ENSMUST00000108608,ENSMUST00000108607 3 10 10 163 11 69731421 69731440 CATCAAACGGAATGACTTCC 59 69730994 69731107 GCACTGTGATCAGGATCTC 59 NA Mus musculus 50 Etohi1 ENSMUSG00000078889 ENSMUST00000109022,ENSMUST00000109023 2 2 9 60 2 175788374 175791622 CTTCTAGAAGTCATGGAAGAGTC 59 175788336 175788357 CCTAAATTTCTTGGCAGTATGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Mef2b ENSMUSG00000079033 ENSMUST00000072500,ENSMUST00000110143,ENSMUST00000110146,ENSMUST00000110141,ENSMUST00000110140 3 5 5 181 8 72688981 72688999 AGAAGGCTTATGAGCTGAG 58 72689144 72689440 CCTCTTCAGTGTCTGAAGG 59 NA Mus musculus 50 Apoo ENSMUSG00000079508 ENSMUST00000113895 3 1 4 128 X 91612815 91625273 ATGAAGCCAGGTAATTCAG 57 91625365 91627460 TAGAGTGAAAGCTCATCGA 57 NA InUTR Mus musculus 50 ENSMUSG00000051638 ENSMUSG00000051638 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 TRBJ1-4 ENSMUSG00000076486 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-466b-2 ENSMUSG00000076966 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-467d ENSMUSG00000077021 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Rpa1 ENSMUSG00000000751 ENSMUST00000000767,ENSMUST00000092907 2 2 2 80 11 75126325 75126489 GCACTAGTAGACATCATTGG 57 75126264 75126282 AACTTCTCTGTTGTTCGAC 57 NA Mus musculus 50 Fmr1 ENSMUSG00000000838 ENSMUST00000088546,ENSMUST00000114651,ENSMUST00000101518,ENSMUST00000114655,ENSMUST00000114653 1 5 8 148 X 65956944 65958438 AGAGGAAATTATGCCACCA 58 65958550 65959048 AAACCACTAACACCCTCTG 59 NA Mus musculus 50 Zfp276 ENSMUSG00000001065 ENSMUST00000001092 1 1 1 82 8 125788963 125789226 GCATGAAGAAGCACATTAAGG 59 125789269 125789288 CATGAATACCTTGTTGCAGC 59 NA Mus musculus 50 Chordc1 ENSMUSG00000001774 ENSMUST00000001825 3 1 1 83 9 18105491 18106474 CTTCTTAAGCATTGTAGGCTG 59 18106519 18106537 GTAGTCTTGACTTCAGGCT 58 NA Mus musculus 50 Paxip1 ENSMUSG00000002221 ENSMUST00000002291 2 1 1 80 5 28081072 28081092 GTAAGATTACCTCCTAAGCTG 57 28079374 28081030 CAAGTCTTCAATTCTGGCT 57 NA Mus musculus 50 Metrn ENSMUSG00000002274 ENSMUST00000002344 1 1 1 160 17 25933213 25933231 CAACGTGCAGAAATGTCTC 59 25932182 25932200 ACTGATTCTTGCAGCTCTG 59 NA DesignNoJunction Mus musculus 50 Grin2d ENSMUSG00000002771 ENSMUST00000002848 1 1 1 81 7 53112898 53112916 CTCTACCTGGTTACCAACG 59 53112251 53112853 GCTGATAGAACACCTCACC 59 NA Mus musculus 50 Kdelr1 ENSMUSG00000002778 ENSMUST00000002855 2 1 1 61 7 53129179 53129197 TATCTGGACCTGTTCACCA 59 53129222 53129423 ATGTAGACCACCTTCATGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 4930455C21Rik ENSMUSG00000002846 ENSMUST00000002925,ENSMUST00000114734 1 2 2 83 16 38510885 38518462 TTTGATGCTGTGCAAAGTG 59 38510820 38510838 AACTGCAGTTCTCCAACTC 59 NA Mus musculus 50 Taf6l ENSMUSG00000003680 ENSMUST00000003777,ENSMUST00000113244 3 2 2 102 19 8856886 8857042 CTGTCAGAGTTCATGTCTCC 59 8856543 8856563 TATTTGAGCAGGTCATCTGTC 59 NA Mus musculus 50 Map3k11 ENSMUSG00000004054 ENSMUST00000004156 1 1 1 103 19 5697641 5700599 CACTCAACGGTAATCCTCC 59 5700666 5700684 TTGGATCAGTTTAGGCGTC 59 NA Mus musculus 50 Cacna1b ENSMUSG00000004113 ENSMUST00000102939,ENSMUST00000070864 1 2 7 94 2 24504064 24504417 GAACTACTTCAGAGATGCCT 58 24494727 24504007 TGTTCGTTTCCGCTATCTC 59 NA Mus musculus 50 Ulk2 ENSMUSG00000004798 ENSMUST00000004920 2 1 1 80 11 61632838 61632858 GTAGCAAGAACTCTTCTTGTG 58 61626272 61632796 GCATGTCATATGAGTGGTC 57 NA Mus musculus 50 Ezh1 ENSMUSG00000006920 ENSMUST00000100417,ENSMUST00000107285,ENSMUST00000107284 2 3 4 81 11 101078434 101078571 AATATGGGAGCAAAGGCTC 59 101078371 101078390 TCTTCCACTCTTCATTGAGG 59 NA Mus musculus 50 Pcdha1 ENSMUSG00000007440 ENSMUST00000115659 3 1 9 175 18 37159981 37160000 AAGTCATTCTGTTGGAGGAG 59 37318983 37319001 TTGCACTGGATACTGTTGG 59 NA DesignNoJunction Mus musculus 50 Met ENSMUSG00000009376 ENSMUST00000115443,ENSMUST00000115442,ENSMUST00000080469 3 3 3 80 6 17476380 17476400 CTCCAGAAGTTATTGTTGAGC 58 17476439 17477088 GAATCTTGGTGATCTTCTTTCC 59 NA Mus musculus 50 Slc3a2 ENSMUSG00000010095 ENSMUST00000010239 3 1 1 120 19 8784091 8784215 GAAAGCTGATGAATGCACC 59 8783850 8783869 ATGTTGACAATTTGCTGCAG 59 NA Mus musculus 50 Lmbr1 ENSMUSG00000010721 ENSMUST00000055195 3 1 2 81 5 29673435 29687596 CAGGATATCGTTGTTTCTGAG 58 29673374 29673392 GCTGATGATTGAGAAGGGT 59 NA Mus musculus 50 Kdelr3 ENSMUSG00000010830 ENSMUST00000010974 2 1 1 81 15 79356278 79356297 AGATCTCAGTAGTGTCTGGA 59 79356340 79357511 CCTTTAAGGACTTTGGTCAC 58 NA Mus musculus 50 ORF61 ENSMUSG00000013858 ENSMUST00000105375,ENSMUST00000052885 3 2 2 82 10 79440755 79440773 TACCACTACCGCTTTAACG 59 79440582 79440711 AAGTAGATCATGGAATGCTGG 59 NA Mus musculus 50 Hivep2 ENSMUSG00000015501 ENSMUST00000015645 3 1 1 80 10 13863696 13863715 ATCCTAACCCTCCATTATCC 57 13863755 13868733 TTCCTCTTCTTAGATTAGGAGG 58 NA Mus musculus 50 Bola1 ENSMUSG00000015943 ENSMUST00000107099,ENSMUST00000016087 1 2 2 62 3 96000828 96000846 ACAGTTGGACATTAGTCCC 58 96000784 96000802 TATTAAGAGGTCCCTCGAG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Atp5e ENSMUSG00000016252 ENSMUST00000016396 2 1 1 81 2 174286712 174288008 AGTAGCTGAATCTGAAGCC 59 174286649 174286667 AGGTTGATTTCCATCTGCC 59 NA InUTR Mus musculus 50 Nbr1 ENSMUSG00000017119 ENSMUST00000103099,ENSMUST00000103098,ENSMUST00000107213,ENSMUST00000107208,ENSMUST00000107212,ENSMUST00000071537,ENSMUST00000107219,ENSMUST00000107218,ENSMUST00000093932,ENSMUST00000107203,ENSMUST00000039852 3 11 11 98 11 101430640 101430658 GATGGGACTCATCTTCAGC 59 101430719 101430820 GAACTTGAGCTTTGTGTCTG 59 NA Mus musculus 50 Pyy ENSMUSG00000017311 ENSMUST00000017455 2 1 1 107 11 101968316 101968334 CAAACTGCTCTTCACAGAC 58 101968121 101968139 GTTAACACATCTCGCAGGA 59 NA DesignNoJunction, InUTR Mus musculus 50 Tha1 ENSMUSG00000017713 ENSMUST00000033230 3 1 1 134 11 117734506 117734526 TTGTAGGAGACGATGATTACG 59 117732406 117732927 GACCCATCACAGAGATGAG 59 NA Mus musculus 50 Wfdc15b ENSMUSG00000018211 ENSMUST00000018355,ENSMUST00000109376 1 2 2 94 2 164040916 164040934 TGATAAAGGCTGCAAGGAC 59 164040321 164040858 TCCGGTTTGTCTATTCTGG 58 NA InUTR Mus musculus 50 Cops3 ENSMUSG00000019373 ENSMUST00000019517 2 1 1 80 11 59643696 59643714 CAAGCCATAGACAAGATGC 58 59641513 59643652 CGCTAGTAAACAAAGCTGG 58 NA Mus musculus 50 Asf1a ENSMUSG00000019857 ENSMUST00000020004 1 1 1 81 10 53322254 53325918 TATGTTTGTGTTTCAGGCTG 58 53325961 53325980 AATCAGAACAACTGTTACCC 57 NA Mus musculus 50 Pkib ENSMUSG00000019876 ENSMUST00000075992,ENSMUST00000095668,ENSMUST00000066028 3 3 3 69 10 57448033 57448052 GATCTTCCACTGAAACTGGA 59 57456105 57456125 GGTCTTTCTCTTCATTCTTCG 58 NA DesignNoJunction Mus musculus 50 Snrpf ENSMUSG00000020018 ENSMUST00000020203 3 1 1 116 10 93050826 93050844 TTTCTCAATGGGCTGACAG 59 93046825 93050746 TTCTGTATTTGCAAGCTGC 59 NA DesignRelaxed Mus musculus 50 Fgf22 ENSMUSG00000020327 ENSMUST00000020577 2 1 1 128 10 79218049 79219341 CAGTATAGTGGAGATCCGT 57 79219512 79219531 CTACAGTCCACAGAGTAGAC 58 NA DesignNoJunction Mus musculus 50 Slc9a3r1 ENSMUSG00000020733 ENSMUST00000021077 2 1 1 109 11 115037818 115038547 ATTGTGGAGGTCAATGGTG 59 115038620 115038638 GTTTCCTTGTCTACCACCA 59 NA Mus musculus 50 Ccdc90a ENSMUSG00000021371 ENSMUST00000021800 2 1 1 80 13 43647061 43650274 GAAGCAAATGGGTTTACCA 58 43646999 43647018 GATGTTCATGTTGGTCTCTG 58 NA Mus musculus 50 Txndc15 ENSMUSG00000021497 ENSMUST00000021959 2 1 1 80 13 55825935 55825954 GGCAAGGTTTAACCATACAG 58 55825997 55827043 TTCTTGGCTTCTATACCCG 58 NA Mus musculus 50 Nr1d2 ENSMUSG00000021775 ENSMUST00000090543 1 1 1 83 14 19049218 19049236 ATGAGGATGAACAGGAACC 58 19047997 19049171 AAATCGAACAGCATCTCGT 59 NA Mus musculus 50 Dlg5 ENSMUSG00000021782 ENSMUST00000090398,ENSMUST00000073687,ENSMUST00000042009 3 3 3 81 14 24966439 24967444 GACCTCATCCTTGAGTATGG 59 24966377 24966395 CCTTAGGCTTCAGCATCTC 59 NA Mus musculus 50 4921509B22Rik ENSMUSG00000021997 ENSMUST00000022574 1 1 1 111 14 75507092 75507110 TTACAAAGCTTCCTGATGG 57 75486136 75498041 TCAAGTGATCTGAGTTTCTG 57 NA Mus musculus 50 4931414P19Rik ENSMUSG00000022179 ENSMUST00000022786 1 1 1 98 14 55210024 55210042 TCTCTTGGATTTGTTGGCT 59 55204820 55209962 ATTGTGGACCAGTTTGGAG 59 NA Mus musculus 50 Jph4 ENSMUSG00000022208 ENSMUST00000022819 3 1 1 107 14 55728919 55728937 TACAACCCATGTTAGAGGC 58 55728572 55728591 TCAGTCCATTCTCGTATACC 58 NA DesignNoJunction Mus musculus 50 Pabpc1 ENSMUSG00000022283 ENSMUST00000001809 1 1 1 81 15 36535249 36535267 TTTGAAACACAGGAAGCAG 58 36532730 36535205 GTCCAACAAACACTTTACGA 58 NA Mus musculus 50 Myh9 ENSMUSG00000022443 ENSMUST00000016771,ENSMUST00000109752 3 2 3 120 15 77605116 77605514 AGAACATCCAGGAACTTGAG 59 77605015 77605033 ATGATGATCTGGTCCTCCT 59 NA Mus musculus 50 Tbc1d23 ENSMUSG00000022749 ENSMUST00000023431 2 1 1 80 16 57198440 57198459 GACATAGAAGACCTGTTCTC 57 57192830 57198398 GAGATGATGGTTATCCTTCC 57 NA Mus musculus 50 Hspbap1 ENSMUSG00000022849 ENSMUST00000023555 1 1 1 81 16 35818836 35824780 CTGGATTGAGCTGGAAGAG 59 35824825 35824843 TGCAGTCTTCAGTGTACAC 59 NA Mus musculus 50 Parp9 ENSMUSG00000022906 ENSMUST00000114880,ENSMUST00000114877 2 2 3 80 16 35941214 35943466 ATTACATGGATACATGGGCG 59 35943507 35943527 AGGCTTTCTTAAATGAGAGGG 59 NA Mus musculus 50 Krt75 ENSMUSG00000022986 ENSMUST00000042957 1 1 1 80 15 101398836 101400599 CAGACGAAGTATGAGGAGC 59 101398774 101398795 CTCTGAAATCTCTTGTTTGGTG 59 NA Mus musculus 50 Scn8a ENSMUSG00000023033 ENSMUST00000096198 3 1 6 87 15 100766945 100766963 AGTTTGCCTTTCATCTACG 57 100767012 100770555 GTTTCTGCGTCAAATAGTACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc22a1 ENSMUSG00000023829 ENSMUST00000024596 1 1 1 80 17 12855736 12857266 CTGTATTACTGGTTTGTCCC 57 12855675 12855693 CTCCATTATCCTTACCGCT 58 NA Mus musculus 50 Chd1 ENSMUSG00000023852 ENSMUST00000024627 2 1 1 80 17 15892019 15892037 AGGATTTAGTGATGCGGAG 59 15893758 15894592 ATTGCATCTAACCTCTCCAG 59 NA Mus musculus 50 Strn ENSMUSG00000024077 ENSMUST00000024881,ENSMUST00000112483 1 2 2 86 17 79055164 79056255 CAATACAGGCAAACTGATCC 58 79055097 79055115 ATCAAGTAGAGGCCATTCG 59 NA Mus musculus 50 Grm8 ENSMUSG00000024211 ENSMUST00000115323,ENSMUST00000115324,ENSMUST00000090512 2 3 3 81 6 27712415 27712434 AAATTATCAAACGCCTGCTG 59 27711352 27712373 AATATCCTCCTGATGTCATCC 58 NA Mus musculus 50 Epc1 ENSMUSG00000024240 ENSMUST00000050542 1 1 3 79 18 6490507 6490525 AATACGCCTCGATAAACCG 59 6489314 6490464 TATAAGTGGCTGTACCGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Brunol4 ENSMUSG00000024268 ENSMUST00000115816,ENSMUST00000025117,ENSMUST00000078609 2 3 3 230 18 25911857 25911875 TTCTGAAGGACAGGTTCAC 59 25663481 25663499 GTTGCTTGTTGAGCATACC 59 NA DesignNoJunction Mus musculus 50 Rab27b ENSMUSG00000024511 ENSMUST00000069749 3 1 1 97 18 70146681 70149207 AACTGGATGAGTCAACTGC 59 70146602 70146620 TTGACTTCCCTTTGGTCTG 59 NA Mus musculus 50 Smad4 ENSMUSG00000024515 ENSMUST00000025393,ENSMUST00000114939 2 2 2 81 18 73818275 73818293 CTAATTTGCCTCACCACCA 59 73816890 73818230 TGAACTGGCCAGTAATGTC 59 NA Mus musculus 50 Tle4 ENSMUSG00000024642 ENSMUST00000052011,ENSMUST00000087726 1 2 2 80 19 14526183 14526202 GTTTGTAAGCACTGGAAAGG 59 14524321 14526143 GATTCTTTGGACTGGAATATGC 59 NA Mus musculus 50 Cndp2 ENSMUSG00000024644 ENSMUST00000025546,ENSMUST00000097500 2 2 2 81 18 84840195 84840214 CCACATTGACTTCGATATGG 58 84839342 84840151 CAGGATGTCTTTCTTGCAG 58 NA Mus musculus 50 Fth1 ENSMUSG00000024661 ENSMUST00000025563 1 1 1 171 19 10058809 10059062 GATATAAAGAAACCAGACCGTG 58 10059286 10059307 GTTCACTCAGATAATACGTCTC 58 NA Mus musculus 50 AI747699 ENSMUSG00000024766 ENSMUST00000025694,ENSMUST00000058385,ENSMUST00000112508 1 3 3 85 19 33632800 33632821 CCTTGATGTGTATGTAAAGCTC 59 33631650 33632757 GTATACCACTTCTTCCTACCTG 59 NA Mus musculus 50 Esrra ENSMUSG00000024955 ENSMUST00000113432,ENSMUST00000025906 2 2 2 159 19 6986970 6986988 TGGTCCTAGATGAAGAGGG 59 6986485 6986847 TCAATGTGCACAGAGTCAG 59 NA Mus musculus 50 Rbp4 ENSMUSG00000024990 ENSMUST00000112335,ENSMUST00000025951 1 2 2 112 19 38191391 38192772 TGAACACAATGGTTACTGTC 58 38191298 38191317 AAATAGAGATGAAGACCGGA 57 NA InUTR Mus musculus 50 Pde6c ENSMUSG00000024992 ENSMUST00000025956,ENSMUST00000112329 3 2 2 84 19 38236453 38236471 CACGAGTTGGTTAAATGCG 59 38236517 38236773 TTGTAAGAACCTCTACAGGGA 59 NA Mus musculus 50 1810055E12Rik ENSMUSG00000024993 ENSMUST00000025957 1 1 1 84 19 60908506 60908525 ACTGCATAAAGAGATTGGTC 57 60908572 60910737 GGCAATGTCCTGTATAACC 57 NA Mus musculus 50 Gsto2 ENSMUSG00000025069 ENSMUST00000056159 3 1 1 81 19 47949528 47950890 GAGCTATTCTGTAAGGTCCC 59 47950934 47950952 CCTTCAGATCCGTACAGTC 59 NA Mus musculus 50 4930442E04Rik ENSMUSG00000025093 ENSMUST00000026083 3 1 1 61 19 59247721 59247739 CCGTTTAAAGTTGGGAGAC 58 59247763 59247782 ATAAGCATTGAATGGTGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1110012N22Rik ENSMUSG00000025141 ENSMUST00000026134 3 1 1 98 11 120508988 120509006 TACCCTCTGTACTTCACCC 59 120507711 120507730 ATCTTTCCACGGAGATTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Stra13 ENSMUSG00000025144 ENSMUST00000055424,ENSMUST00000106154,ENSMUST00000106155,ENSMUST00000026137 2 4 4 121 11 120572787 120573029 ATCTTCGTACTAGAGGCTG 57 120572601 120572619 GAACTCTAGAAGTCCAGGA 57 NA Mus musculus 50 Actr1a ENSMUSG00000025228 ENSMUST00000040270 3 1 1 84 19 46453128 46453911 AAGATCAGGATATCTGCACC 58 46452925 46452943 TCTTAAAGGTGTCCAGGGA 59 NA Mus musculus 50 Fgd1 ENSMUSG00000025265 ENSMUST00000101166 2 1 3 60 X 147501948 147501966 AAAGAGAAATTCCAGTGCC 57 147501990 147502008 GCATAAGTCAGTACCTCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Psmd13 ENSMUSG00000025487 ENSMUST00000026560 2 1 1 84 7 148072303 148072321 TCAGTGAGTTTGAGCACAG 59 148072456 148072710 ACATTAGGATCGGTCATCTG 58 NA Mus musculus 50 Gusb ENSMUSG00000025534 ENSMUST00000026613,ENSMUST00000111308,ENSMUST00000026614 1 3 3 94 5 130475934 130476243 CTGACACCTCCATGTATCC 59 130475858 130475876 ATAGAGGACCACAGATCGA 59 NA Mus musculus 50 Uimc1 ENSMUSG00000025878 ENSMUST00000026997,ENSMUST00000099496,ENSMUST00000058181 3 3 3 80 13 55157379 55157398 GAAGACTCTCCAGATAGCAG 58 55152238 55157338 ATCTTCCCTATTAGCAACCTG 59 NA Mus musculus 50 Myo5b ENSMUSG00000025885 ENSMUST00000074157,ENSMUST00000114883 2 2 2 122 18 74904414 74918688 AGCCTATGATAGTTTCTGCC 59 74918773 74918791 CCAGGCAATACGAATTCTC 58 NA Mus musculus 50 9430016H08Rik ENSMUSG00000025971 ENSMUST00000027114 2 1 1 80 1 57470222 57472510 CAAGCTATGAATTTCAGAGGG 58 57472550 57472570 GTAACTTGGAGTGTTCAATCC 58 NA Mus musculus 50 Il18r1 ENSMUSG00000026070 ENSMUST00000087983,ENSMUST00000097771 1 2 2 80 1 40535384 40537776 TGGCTGTATAAGAACTGTAAGG 59 40537817 40537835 GTAGTAGCCCTCATCTCCA 59 NA Mus musculus 50 B3gat2 ENSMUSG00000026156 ENSMUST00000063663 3 1 1 60 1 23851848 23851945 TAACTGCACCAAGGTTCTC 59 23851969 23851987 CTCATTGGCTAGATTGACC 57 NA DesignRelaxed Mus musculus 50 Klhl30 ENSMUSG00000026308 ENSMUST00000027533 3 1 1 88 1 93253983 93254335 ATGTTTACGTCACAGGTGG 59 93254387 93254405 GATAGCTTCCTTCAGTGGG 59 NA Mus musculus 50 Optn ENSMUSG00000026672 ENSMUST00000114996,ENSMUST00000027986 2 2 2 84 2 4955255 4955273 AAGAAGTTAGAGCTGCAGG 59 4954260 4955207 CTAACCTGGACTTCTCCTC 58 NA Mus musculus 50 4930562F07Rik ENSMUSG00000026729 ENSMUST00000028061 3 1 1 232 1 162007607 162007925 AAGAGTCTTCTGTCTTAGGG 58 162005339 162005357 GGATCAGACACGAAAGAGG 59 NA DesignNoJunction Mus musculus 50 Myef2 ENSMUSG00000027201 ENSMUST00000067780,ENSMUST00000110500 3 2 4 100 2 124924535 124924555 AGGAGTGAATAGAATTGGAGG 58 124923803 124924195 GGTATAGCTCTCCCATTCG 59 NA Mus musculus 50 Rbck1 ENSMUSG00000027466 ENSMUST00000028964 1 1 2 80 2 152156833 152157780 GACCAAGAAAGCAGAGGAG 59 152156771 152156789 GCATACTTGATAGCAGCCT 59 NA Mus musculus 50 1700058C13Rik ENSMUSG00000027482 ENSMUST00000109746,ENSMUST00000028984 3 2 2 92 2 153961351 153962006 CATTGAATTCAAACTGCCCT 59 153962061 153962079 AACTCATCTTTCTCCAGCC 59 NA Mus musculus 50 Aurka ENSMUSG00000027496 ENSMUST00000109139,ENSMUST00000109140,ENSMUST00000028997 1 3 3 80 2 172192661 172194493 CTGTTAAGACCACTGTTCC 57 172192599 172192617 TAGCAGATCCTAGGTTCTG 57 NA Mus musculus 50 2310003C23Rik ENSMUSG00000027573 ENSMUST00000029090 2 1 2 69 2 180447968 180447986 AACTTGCATGTTCAACGAG 58 180448019 180449406 CCTTAAAGCCCTCTGTGAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Itch ENSMUSG00000027598 ENSMUST00000029126,ENSMUST00000109685 1 2 2 80 2 154989205 154994426 AACTTCAGATCACTGTCATCTC 59 154994464 154994485 TGACTTCTACATAAGGACTTGG 59 NA Mus musculus 50 Anxa5 ENSMUSG00000027712 ENSMUST00000029266 2 1 1 80 3 36351158 36351178 GGATTTCAGATTGAGGAAACC 58 36349608 36351116 AATAGACTTCACGACAGCC 59 NA Mus musculus 50 Bche ENSMUSG00000027792 ENSMUST00000029367 3 1 1 86 3 73452609 73452627 ACTCTAAACTTCGTGCTCC 59 73443946 73452561 CCGTTTCATCAATATCTCCTG 58 NA Mus musculus 50 Ppid ENSMUSG00000027804 ENSMUST00000029382 1 1 1 158 3 79401648 79401666 CAATACGAATGGCTCTCAG 57 79401788 79402724 ATAACACAGAGTTTGGCAG 57 NA Mus musculus 50 Zfp364 ENSMUSG00000028098 ENSMUST00000029740 3 1 1 86 3 96588979 96589862 TGTAACCCAGCTTCTAGGA 59 96589912 96589930 ACTGTAACTGTTGGGAGAG 58 NA Mus musculus 50 Atp6v0d2 ENSMUSG00000028238 ENSMUST00000029900 3 1 1 81 4 19814519 19815898 TATACAAGTCTTACCTTGAGGC 59 19814459 19814477 AGAATGGGACACATAACGT 58 NA Mus musculus 50 Mpdz ENSMUSG00000028402 ENSMUST00000102830,ENSMUST00000107261,ENSMUST00000107258,ENSMUST00000070461 1 4 4 80 4 80943449 80949506 GCTTCCTAAGGATCAAGGAG 59 80943388 80943407 GTTAGGCTTTCGATCATGAC 58 NA Nonspecific Mus musculus 50 Aqp7 ENSMUSG00000028427 ENSMUST00000116345,ENSMUST00000054945,ENSMUST00000030136 1 3 3 82 4 40981489 40981801 CAAACAAGTGTTCAGAGCC 59 40981425 40981443 CAATACCACCTAGGTAGGC 58 NA Mus musculus 50 Calr4 ENSMUSG00000028558 ENSMUST00000106629,ENSMUST00000106631,ENSMUST00000106628,ENSMUST00000030285 2 4 4 80 4 108911571 108914765 TATTACATCATGTTCGGCCC 59 108914805 108914826 GTATTTCCCTTTGTGAGAAAGG 59 NA Mus musculus 50 Tnfrsf1b ENSMUSG00000028599 ENSMUST00000030336 1 1 1 81 4 144814209 144814227 AGCATCCTTACATCGTTGG 59 144813475 144814166 CAATCAGACCAATTGGAAGAG 58 NA Mus musculus 50 Mycbp ENSMUSG00000028647 ENSMUST00000030400,ENSMUST00000106202 3 2 2 103 4 123582314 123582478 CTATGGCCCATTACAAAGC 58 123582544 123586890 TAAGGCTACCAACACTTTCG 59 NA DesignRelaxed, InUTR Mus musculus 50 Tspan1 ENSMUSG00000028699 ENSMUST00000030465 2 1 1 88 4 115837121 115839622 ACTCATCTTTCTCTGTGGTG 59 115837052 115837070 GTGATCCGAAGACCTTCAG 59 NA Mus musculus 50 Cd164l2 ENSMUSG00000028865 ENSMUST00000097852 1 1 3 190 4 132778093 132778111 ATCATTCCACAGAGGAACC 58 132779654 132779919 GTTCTCTTCCAGTGTCTGG 59 NA Mus musculus 50 Mxra8 ENSMUSG00000029070 ENSMUST00000030947 2 1 1 116 4 155217067 155217085 ATAGGACTGAGGACATCCA 58 155217240 155217425 CCTTCCTGAACTCTTTATCCA 59 NA Mus musculus 50 Ints1 ENSMUSG00000029547 ENSMUST00000072607 1 1 1 82 5 140246072 140246090 TCAACTTCCAAGCCTTCTG 59 140245353 140246027 AAACCGCTCCTTAAATTCCA 59 NA Mus musculus 50 D930005D10Rik ENSMUSG00000029576 ENSMUST00000110787 1 1 5 130 5 142982547 142982565 ATGACACTGATTGAGCCTG 59 142961134 142961152 GTTTCCATGTCAGACTTGG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Gcc1 ENSMUSG00000029708 ENSMUST00000064377 1 1 2 99 6 28369295 28370297 AGAAATGAGGAAGACAGCC 59 28369214 28369232 TACCTCAGAGATCTGGCTC 59 NA Mus musculus 50 Zc3hav1 ENSMUSG00000029826 ENSMUST00000114900,ENSMUST00000039710,ENSMUST00000114898,ENSMUST00000031850 1 4 4 81 6 38281809 38281828 CTAGGATGGATGATCATGGC 59 38279257 38281765 TTCTTGTTGCAGTTGACCT 59 NA Mus musculus 50 Dbpht2 ENSMUSG00000029878 ENSMUST00000072100 2 1 1 106 12 75399835 75399853 CTCATGCAAGTATGCACAC 59 75399923 75399941 CGAGTATCTCTGCTTCTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gys2 ENSMUSG00000030244 ENSMUST00000032371 1 1 1 80 6 142402986 142403005 ATTCTCAAACAAAGGAGCAG 58 142400144 142402944 ACGTTACTCTTATGCATCCT 58 NA Mus musculus 50 Golt1b ENSMUSG00000030245 ENSMUST00000032372 3 1 1 137 6 142342580 142342599 CTGATAGGCATGATCTTCGA 59 142344777 142350071 GTCTACGAATGATCTGATTCCA 59 NA Mus musculus 50 Tspan9 ENSMUSG00000030352 ENSMUST00000112173,ENSMUST00000032503,ENSMUST00000112171 2 3 3 106 6 127917100 127917118 ACAAGTGTCTGCTTCTCAG 59 127916490 127916753 ATTCTCGTTCACCTTGTCC 59 NA Mus musculus 50 Slc5a11 ENSMUSG00000030769 ENSMUST00000033035,ENSMUST00000098061 1 2 2 81 7 130404090 130404108 TACCTGAAAGTGCTTCCTC 58 130404153 130408717 CACAGGCTACTTGATCTGG 59 NA Mus musculus 50 Itgax ENSMUSG00000030789 ENSMUST00000033053 2 1 1 80 7 135276916 135277184 CAAGCATGTCATAACAGAACTG 59 135277224 135277243 TCAGTGATGACAATGAGGAC 59 NA Mus musculus 50 Ctag2 ENSMUSG00000031181 ENSMUST00000033524 1 1 1 94 X 62301717 62301906 TTCTCACTGTTAGGTGGAC 58 62301964 62301982 GATGTTTCTCACCACAAGG 58 NA Mus musculus 50 Zrsr2 ENSMUSG00000031370 ENSMUST00000112289,ENSMUST00000033736,ENSMUST00000090840 2 3 3 92 X 160395906 160395925 GTAAGAAGTACTTGGCCCTC 59 160394471 160395851 CTTTCTGTGCCAATTCTGC 59 NA Mus musculus 50 Ankrd10 ENSMUSG00000031508 ENSMUST00000033905 2 1 1 140 8 11615907 11619077 AAAGCTAGAACCAGAGTTCC 59 11612919 11612937 ATTCAACACGGAGCTACTG 59 NA Mus musculus 50 Fgf20 ENSMUSG00000031603 ENSMUST00000034014 1 1 1 89 8 41366520 41366538 GACTGGTCAGTATCAGAGG 58 41365344 41366470 CAGAAGTCAATTTCTCTGATCC 58 NA Mus musculus 50 Tbc1d9 ENSMUSG00000031709 ENSMUST00000093393,ENSMUST00000034145 3 2 2 86 8 85763859 85763877 GATTTCTTGCAGCAAACGA 59 85763924 85765445 AGAATACACCTCATCATCTGAG 59 NA Mus musculus 50 Bckdhb ENSMUSG00000032263 ENSMUST00000116537,ENSMUST00000034801,ENSMUST00000113206 1 3 3 109 9 83962796 84015859 CAGGAAGAATGTTTCTTGAACC 59 84015929 84015947 CACTTCCATTTGTCTGGGA 59 NA DesignNoJunction Mus musculus 50 Mlh1 ENSMUSG00000032498 ENSMUST00000035079 2 1 1 80 9 111158627 111159911 GTTGGCAGGTATTCAATACAC 59 111158191 111158212 TGTTCTGACATCAGATACTGTC 59 NA Mus musculus 50 Abcc4 ENSMUSG00000032849 ENSMUST00000036554 3 1 1 80 14 118899973 118899993 GGGCCATTCTAAAGAATAACC 58 118899277 118899934 GTATTAACTCATCCGTTCTTGG 58 NA Mus musculus 50 Ccdc85a ENSMUSG00000032878 ENSMUST00000093253,ENSMUST00000042534,ENSMUST00000109502,ENSMUST00000109501 1 4 4 60 11 28477336 28483292 GAGGGCTCAAGGATATTAACC 59 28477296 28477314 CATAGGTCCCTCAGTTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mgll ENSMUSG00000033174 ENSMUST00000113585,ENSMUST00000089449 3 2 4 121 6 88759431 88768576 GACTTTGAAGGTCCTTGCT 59 88773188 88773206 GGTCAGAGTTGTACAGGTC 59 NA DesignRelaxed Mus musculus 50 Churc1 ENSMUSG00000033395 ENSMUST00000041262 2 1 2 81 12 77874368 77876587 GTTACCTATGACCATCTGTG 57 77876630 77876649 GAAATTCATCCATGATGCTG 57 NA Mus musculus 50 Mrcl ENSMUSG00000033633 ENSMUST00000109180,ENSMUST00000039597 2 2 2 159 8 113595579 113595897 ATTTCTGGATTGGGCTCAC 59 113594626 113594644 TCATTCCAGTTGAAGGCAG 59 NA Mus musculus 50 Neu4 ENSMUSG00000034000 ENSMUST00000050890,ENSMUST00000065404 2 2 2 99 1 95919094 95919112 GACTTAGCCCTGATGACTC 59 95919277 95919295 GTCTCCAGTACACTCAGAG 58 NA DesignNoJunction Mus musculus 50 6430628N08Rik ENSMUSG00000034185 ENSMUST00000049266 1 1 1 60 4 115571354 115571372 CGTTGATTAGACTGGACCC 59 115571396 115571414 TAAAGCTCAAATGCCACAG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Gulo ENSMUSG00000034450 ENSMUST00000059970 1 1 1 80 14 66607106 66609230 CATCATTATGTACAGGCCC 57 66607044 66607063 AACTTCTTCATGATGGTCTC 57 NA Mus musculus 50 Syt1 ENSMUSG00000035864 ENSMUST00000105276,ENSMUST00000064054 3 2 2 83 10 108069016 108073621 TTCCAGAATAACCAGCTGC 59 108068951 108068970 GTATGGATCAGATGTGCCTC 59 NA Mus musculus 50 Pawr ENSMUSG00000035873 ENSMUST00000095313 3 1 2 82 10 107770300 107770318 AGATCGAGAAGAGGAAGCT 59 107770363 107819800 GTACTCATCTAAGCACTCCG 59 NA Mus musculus 50 Pawr ENSMUSG00000035873 ENSMUST00000095313,ENSMUST00000105277 1 2 2 60 10 107849082 107849101 AATGATTGGGAAACTCAAGG 58 107849123 107850741 TTCCATGTCATCTAGGTCTC 58 NA DesignNoJunction Mus musculus 50 Serbp1 ENSMUSG00000036371 ENSMUST00000042990 3 1 1 93 6 67222214 67222823 TGAATTAACAGAGTCACCCA 58 67222879 67222897 TTCAGGTGTTTCCTCAGTC 59 NA Mus musculus 50 Cuedc2 ENSMUSG00000036748 ENSMUST00000051234 2 1 1 80 19 46406448 46406466 TTGATATGGAGGCCTTCAC 59 46406292 46406407 TGTCTCCTATTATACCTCTGGG 59 NA Mus musculus 50 Slc9a7 ENSMUSG00000037341 ENSMUST00000072451,ENSMUST00000115393 3 2 2 80 X 19782538 19782558 CACTCTGAAAGGAGAAATCAG 58 19779900 19782497 GGATCAAATGTTACCTTCCG 58 NA Mus musculus 50 Hrh4 ENSMUSG00000037346 ENSMUST00000041676 1 1 1 82 18 13174441 13180284 CAAATGCTGTGTCTTATAGGG 58 13180327 13180346 GAAAGCCAGTATCCAAACAG 58 NA Mus musculus 50 1700021A07Rik ENSMUSG00000037535 ENSMUST00000042671 1 1 1 211 10 21145199 21145217 GAACATCCATCTCCCTGTG 59 21145392 21145410 CCAGGCATCATCAAATGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 D9Ertd280e ENSMUSG00000037681 ENSMUST00000042158 3 1 1 86 9 99215659 99215677 AAGAGATCACTGGATGTCG 58 99212400 99215610 TAAGTCAATCAGCACTTTCC 57 NA Mus musculus 50 Gm443 ENSMUSG00000038044 ENSMUST00000045016 1 1 1 60 5 25022403 25022421 TCAAGAATTAGCCCAAACC 57 25022445 25022463 TAGAACAACAAAGACCGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Hand2 ENSMUSG00000038193 ENSMUST00000040104 3 1 1 165 8 59801107 59801126 TCTCCAAGATCAAGACACTG 59 59801253 59802572 TTCAAGATCTCATTCAGCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mapkap1 ENSMUSG00000038696 ENSMUST00000040459,ENSMUST00000113129,ENSMUST00000113124,ENSMUST00000113123,ENSMUST00000113126 2 5 5 86 2 34475387 34475405 GTATCTAAGCAGCCATGAC 57 34475454 34478953 ATGTAGTTAACCTTGAGCAC 57 NA Mus musculus 50 Hoxb5 ENSMUSG00000038700 ENSMUST00000049272 1 1 1 64 11 96165480 96166212 ATCAGCCACGATATGACTG 59 96166240 96166258 GTCTGGTAGCGAGTATAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 2900075B16Rik ENSMUSG00000039478 ENSMUST00000068999 1 1 1 80 8 41421303 41425655 CAGATGAGCCCAAATTTGC 59 41434309 41434327 CTGGTGGAGTTTCTGAGAG 59 NA Mus musculus 50 Batf2 ENSMUSG00000039699 ENSMUST00000045042 3 1 1 97 19 6166498 6166516 AAGAAGCAGAAGAACCGAG 59 6171310 6171328 TGTTTCTCCAAGGATTCGT 58 NA DesignNoJunction Mus musculus 50 Trub2 ENSMUSG00000039826 ENSMUST00000113807,ENSMUST00000048044 2 2 3 82 2 29637710 29638839 TCACCAAGGATTACACAGTG 59 29637647 29637665 TGTCTTCTCTATCAGCCGT 59 NA Mus musculus 50 Bub1b ENSMUSG00000040084 ENSMUST00000038341 3 1 1 80 2 118458238 118460875 CATGATAAAGGCATCATCTCAG 58 118460916 118460934 TAGTCCTCATTCAGACGCT 59 NA Mus musculus 50 2210417D09Rik ENSMUSG00000040121 ENSMUST00000036194 1 1 1 60 6 146981600 146981618 ATTTGACAAGCTGCAAGAG 58 146981642 146981660 GATAAACAGACCCAGACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Svs2 ENSMUSG00000040132 ENSMUST00000099101,ENSMUST00000044953 3 2 3 88 2 164061961 164062564 TCAATATCAAGGACTCGCC 59 164061891 164061909 TCCATGAACCAACGATCTG 59 NA Mus musculus 50 1700054O13Rik ENSMUSG00000040456 ENSMUST00000044987 3 1 1 60 X 9424255 9424273 GTACCGTATACTGCAGGAG 58 9424296 9424315 GAAATCTGAAGTTGTGGACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sox30 ENSMUSG00000040489 ENSMUST00000109253,ENSMUST00000049038 1 2 2 122 11 45796948 45796966 AGAAATCAGTGTCCAGCTC 59 45797051 45798228 TAAACCCAACCAGGAAACTC 59 NA Mus musculus 50 Sh3pxd2b ENSMUSG00000040711 ENSMUST00000038753,ENSMUST00000109378 3 2 2 94 11 32271520 32271538 CTACATCATCCGAGTCACG 59 32271596 32281449 TGTCCAACATCTGCATCTG 59 NA Mus musculus 50 Rwdd2b ENSMUSG00000041079 ENSMUST00000039101 3 1 1 80 16 87437170 87437319 ATTACAGTGAGATCAGTATCGC 59 87437111 87437129 GTTCTTCTGCAGGTATGCT 59 NA Mus musculus 50 Wnk3 ENSMUSG00000041245 ENSMUST00000096285 1 1 1 80 X 147709539 147709557 GAACAAACAACGAAGAGCC 59 147709601 147711406 GAGACTGAGACCTGAAGGA 59 NA Mus musculus 50 Gpr110 ENSMUSG00000041293 ENSMUST00000047399 1 1 1 80 17 43444488 43444507 TTCTGAGCAACATTTCATCC 58 43444547 43446951 CTATGTTGATGACGTTCATCAG 59 NA Mus musculus 50 4930569F06Rik ENSMUSG00000041512 ENSMUST00000036821 2 1 1 60 5 117271781 117271799 TTATCGGAAGACCTAGCCA 59 117271821 117271841 CATAGGCCCATAAGAAAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Brwd2 ENSMUSG00000042055 ENSMUST00000084519 1 1 1 80 7 136767864 136768229 GTATCCAGAGGAATACCCA 57 136768272 136768291 TATTAGCTTCTGGTTTCCCT 58 NA Mus musculus 50 Abhd14a ENSMUSG00000042210 ENSMUST00000048685 1 1 1 93 9 106346629 106347866 TTCCACAGAGGTTCTATGG 58 106346554 106346572 TATACAGGAGGAACACGAG 57 NA InUTR Mus musculus 50 Olfr631 ENSMUSG00000042219 ENSMUST00000059011,ENSMUST00000106863 3 2 2 60 7 111077364 111077383 TTAGCCCTATGTTCTACCTC 57 111077406 111077424 AAGATCCAGTGTTCAAAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ikbke ENSMUSG00000042349 ENSMUST00000062108 1 1 1 108 1 133170025 133170043 GGATCTCTGGAGTATTGGG 58 133168783 133169955 GGTGATTCTGTACATGATCTC 57 NA Mus musculus 50 Agps ENSMUSG00000042410 ENSMUST00000111952,ENSMUST00000047232,ENSMUST00000111951 3 3 3 80 2 75706457 75715533 TATGGGATCTGAAGGAACTC 58 75715576 75715594 CCGTACTTCTGGTACTCAG 58 NA Mus musculus 50 Jph1 ENSMUSG00000042686 ENSMUST00000038382 2 1 1 90 1 16994026 16994047 GAAGTCTGAACTTGCTATACCA 59 16987626 16993975 GATGGAATTAGGGCCAGAG 59 NA Mus musculus 50 1700012A16Rik ENSMUSG00000042708 ENSMUST00000042373 3 1 1 82 1 155283196 155283216 TGCTGGAAGAAGTACTATGAG 58 155283260 155284666 GGTCCATGAACTCTTAGCC 59 NA Mus musculus 50 B630005N14Rik ENSMUSG00000042742 ENSMUST00000045235 1 1 1 99 6 13613274 13613292 TTTGCGAATATGCTGTTGC 59 13591849 13613212 CTGCATACACTACAACACCA 59 NA Mus musculus 50 Il17re ENSMUSG00000043088 ENSMUST00000058548,ENSMUST00000062146,ENSMUST00000113073,ENSMUST00000101065,ENSMUST00000053569 2 5 5 109 6 113413983 113414002 TATGAATTCCTTCTGCCCTG 59 113414813 113415718 TCTGAGCCATAAGCTTCAG 59 NA Mus musculus 50 Hoxa6 ENSMUSG00000043219 ENSMUST00000062829 1 1 1 71 6 52158435 52158453 TTACCAACAGTCCAACTCG 59 52158382 52158400 GAATAGAAACATGAGGCCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cox8c ENSMUSG00000043319 ENSMUST00000053611 1 1 1 60 12 104138535 104138555 CAAAGGAGAGTAGATACAGGA 58 104138576 104138595 TTTCCCATTTAAAGGAGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr78 ENSMUSG00000043366 ENSMUST00000060187 3 1 1 125 7 109894542 109894560 CTCCTTGAGTAGAACTGCG 59 109891470 109891489 TACCAATAAGCAGGAAGGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Rab9b ENSMUSG00000043463 ENSMUST00000058814 3 1 1 150 X 133397385 133402944 CCCATTGTGTTGGAATCCT 59 133396165 133396184 TAAGAGAAGGGATTTCCCAC 58 NA DesignNoJunction, InUTR Mus musculus 50 Ccdc60 ENSMUSG00000043913 ENSMUST00000050178 1 1 3 80 5 116584082 116584101 ATAACAAAGATGAGGCACCA 59 116581207 116584039 CAGCAGATCGAAGTACCAG 59 NA Mus musculus 50 Il20rb ENSMUSG00000044244 ENSMUST00000093793 3 1 3 81 9 100368862 100373431 TTAACCGAAATGCAACTGTC 59 100368800 100368819 TCTTCCAGCTCAATAACCAG 59 NA Mus musculus 50 BC024139 ENSMUSG00000044361 ENSMUST00000054022,ENSMUST00000089654,ENSMUST00000068344 2 3 3 68 15 75951893 75951912 TAGAGAAGTTGGTCTTGTGC 59 75951584 75951862 CTTGTACCACCTTGATCCC 59 NA DesignRelaxed, InUTR Mus musculus 50 Ankrd58 ENSMUSG00000044400 ENSMUST00000060057 2 1 1 76 X 34589655 34589673 AAGAGTGGGAGATTGAACG 59 34589713 34589731 GGTAGTAGTGGTGGTAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 NM_019468.1 ENSMUSG00000045120 ENSMUST00000053876 3 1 1 60 5 62200953 62200974 TACCACAGATTCAGATGATGTC 59 62200993 62201013 CTCTGAGATACGTTTCAACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rp1l1 ENSMUSG00000046049 ENSMUST00000058229 1 1 2 64 14 64645015 64645033 TATCTAGTGTGACTGCGAG 58 64646595 64646613 TATGACACTTTGTTTGGCG 58 NA DesignNoJunction Mus musculus 50 BC053393 ENSMUSG00000046974 ENSMUST00000050937 3 1 1 101 11 46390978 46397875 CAGATTCAACCAGGAAGCA 59 46397939 46397958 TGTGATAACTAATGTGCCCA 59 NA Mus musculus 50 Wdr27 ENSMUSG00000046991 ENSMUST00000060103 2 1 1 81 17 15065400 15069533 AAGACACTTAAAGGGCTGAC 59 15065338 15065357 CCAGACTAAATCGCAAACAC 59 NA Mus musculus 50 Gpr15 ENSMUSG00000047293 ENSMUST00000089318 1 1 1 60 16 58718096 58718114 ATCGTTATTATTGCGGTGG 57 58718054 58718073 GCTTGAAAGTGTTAAAGGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr844 ENSMUSG00000049229 ENSMUST00000054106 3 1 1 60 9 19123532 19123550 ATCAAGCTGTCATGTTCTG 57 19123573 19123592 TGAAAGTTGCCAAGTATACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rps23 ENSMUSG00000049517 ENSMUST00000051955 1 1 1 60 13 91063995 91064013 AACGGGAAGAAGATCACAG 59 91064036 91064145 TTTCCTCAATGAAGTTCAGG 57 NA Nonspecific, DesignNoJunction Mus musculus 50 Trex1 ENSMUSG00000049734 ENSMUST00000112054 2 1 3 60 9 108971902 108974240 TCCAGAAAGCTCCAATCAC 59 108971860 108971878 ACTCATTCATTTCTGCGTC 58 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 Suox ENSMUSG00000049858 ENSMUST00000054764 3 1 1 61 10 128109325 128109600 CATCAGAGTCAAGTCAACC 57 128109282 128109300 GTGAATCATTTGTGGAGCA 58 NA DesignNoJunction Mus musculus 50 Akap4 ENSMUSG00000050089 ENSMUST00000057101,ENSMUST00000115750,ENSMUST00000115751 1 3 3 80 X 6654938 6655393 GGACAACTAGAGAAGCTCC 59 6655436 6655455 GACCTCCTGAAGAAGATCTC 58 NA Mus musculus 50 Pla2g4e ENSMUSG00000050211 ENSMUST00000090071 1 1 1 80 2 119997504 119997522 CCTGGAATTTGTCTCACAC 58 119997036 119997460 TGGGATCATCTTCGATGTC 58 NA Mus musculus 50 5730508B09Rik ENSMUSG00000050549 ENSMUST00000057198 2 1 1 124 3 127573904 127598956 AGCAGGATATTGAAGAACCA 58 127573799 127573817 ATACATCCTTGTGAAGCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnb1 ENSMUSG00000050556 ENSMUST00000059826 3 1 1 60 2 167013866 167013884 CAACGAGTACTTCTTCGAC 57 167013824 167013845 GCGGTAGAAATTGAGAATAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1284 ENSMUSG00000050781 ENSMUST00000062407 1 1 1 60 2 111219307 111219326 TTAATGACTCCCGTTTACAG 57 111219349 111219367 TCAATGAGGGACAGATTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 2900024O10Rik ENSMUSG00000051098 ENSMUST00000057598 3 1 1 60 13 81889084 81889102 TGGATCACTGATTGACTGG 58 81889124 81889144 CTCACAAGTTCCAACATAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Dpm1 ENSMUSG00000051149 ENSMUST00000109196 3 1 3 103 2 168014883 168035939 GAGCCAAAGAAACTATGTTCC 59 168014800 168014819 GTATTCCAACCCAATGTCAC 58 NA InUTR Mus musculus 50 Gen1 ENSMUSG00000051235 ENSMUST00000052581 3 1 1 81 12 11269266 11269284 TTTGAGTCTCTGGGTATGC 58 11267865 11269221 AAATAGGTTCCTGAGGTGG 58 NA Mus musculus 50 Zfp46 ENSMUSG00000051351 ENSMUST00000069195,ENSMUST00000097841 1 2 2 68 4 135843213 135845878 GAAATGTTGTCTCACTGGA 57 135845910 135845928 CACTAAACTCCTGTTTGGG 57 NA DesignNoJunction Mus musculus 50 BC068281 ENSMUSG00000051721 ENSMUST00000085793 1 1 2 85 12 4858672 4858690 TTCTACACAAGGAGAAGCG 59 4858737 4862092 ACAAGGGTTCTGGTAAATGAG 59 NA Mus musculus 50 Opa3 ENSMUSG00000052214 ENSMUST00000063976 3 1 1 75 7 19813899 19813917 CTTCAAGACCTACATCTGC 57 19830125 19830143 CATTATGCGCATCTTCGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr536 ENSMUSG00000052508 ENSMUST00000064392 1 1 1 126 7 147690436 147692146 ACTATTAGAGAACAGGTTCCTC 58 147690331 147690349 ATAGCTGACTGGTTCACTG 58 NA InUTR Mus musculus 50 Rnf103 ENSMUSG00000052656 ENSMUST00000114179,ENSMUST00000064637 3 2 2 80 6 71446895 71446914 CAATTTCAGTGGTGAAATGC 58 71446957 71455738 TTTGCTATGACCTGAACCA 58 NA Nonspecific Mus musculus 50 Slamf8 ENSMUSG00000053318 ENSMUST00000065679 1 1 1 91 1 174514773 174518054 ATCTCAAGGTGTACGATGC 59 174514700 174514718 GACCTGACAGGTATTGAGG 59 NA Mus musculus 50 ENSMUSG00000053615 ENSMUSG00000053615 ENSMUST00000066157 2 1 1 65 2 125331118 125331136 TTAAAGTCCCAAGAAGGGC 59 125331165 125331183 CTGAAAGGGTAAGGGAAGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Klk1b26 ENSMUSG00000053719 ENSMUST00000048945 2 1 2 132 7 51270290 51271256 CTATGTCGACCAGTATGAGG 59 51271351 51271369 TGTTTGAAGCATCAGGAGG 59 NA Mus musculus 50 Gimap4 ENSMUSG00000054435 ENSMUST00000114527 3 1 3 105 6 48640853 48640871 AGTTCCAGAATCGCTACTG 59 48640938 48641421 ATTACTTCATCCATGCTCTGG 59 NA Mus musculus 50 Arntl ENSMUSG00000055116 ENSMUST00000084703,ENSMUST00000047321,ENSMUST00000106637 3 3 3 88 7 120434993 120435011 TTTGTCGTAGGATGTGACC 59 120435062 120436705 CCAATAAGGTCATTCTGGCT 59 NA Mus musculus 50 Rage ENSMUSG00000056458 ENSMUST00000109803,ENSMUST00000070565,ENSMUST00000084974,ENSMUST00000021701 3 4 4 82 12 112051892 112053185 TAGTAAAGCAGGATGTCCTG 58 112051829 112051847 GATGTACTCTGTGTAGGGC 59 NA Mus musculus 50 Zfp759 ENSMUSG00000057396 ENSMUST00000052716 2 1 1 105 13 67237685 67237703 ATTTCTCTGCAGAGGAGAG 58 67237771 67238255 GAAGCAAGACCTAGAAAGAC 57 NA Mus musculus 50 Fbxo18 ENSMUSG00000058594 ENSMUST00000114813,ENSMUST00000102966,ENSMUST00000114808,ENSMUST00000071564 1 4 4 80 2 11688792 11688811 GACCTCTACTGGAATCTCAG 58 11685843 11688751 CTTCTTCCAAGGAATGAACAG 58 NA Mus musculus 50 Olfr875 ENSMUSG00000058628 ENSMUST00000080634 3 1 1 70 9 37580751 37580770 CTGACAACCTCATCAATCAC 58 37580803 37580821 GAAGGTGTTGCTACAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Speer4f ENSMUSG00000058643 ENSMUST00000076099 2 1 1 89 5 16985319 16985337 ATTCAACAGCATTTGGACG 59 16985390 16986141 TTCTGAGACCTGATGTTCC 58 NA Mus musculus 50 En1 ENSMUSG00000058665 ENSMUST00000079721 3 1 1 69 1 122503559 122503577 AAACCGCTATATCACGGAG 59 122503610 122503628 GATCTGGGACTCATTCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rcan3 ENSMUSG00000059713 ENSMUST00000030606 1 1 1 60 4 134974318 134974336 TCAACTATGACCTGCTCTG 58 134972495 134972513 TGCAGTTCGTATTTCTCCC 59 NA DesignNoJunction Mus musculus 50 Flot1 ENSMUSG00000059714 ENSMUST00000001569 1 1 1 80 17 35967984 35968003 GAAGTACTGGACATCTTGAG 57 35968046 35969463 GTTGTGATTTACCTGGGAG 57 NA Mus musculus 50 Grb2 ENSMUSG00000059923 ENSMUST00000106499,ENSMUST00000106500 3 2 5 87 11 115516730 115516749 CCAGAACTGGTATAAGGCAG 59 115508183 115516680 ATTTCCAAACGGATGTGGT 59 NA Mus musculus 50 BC002059 ENSMUSG00000060149 ENSMUST00000071374 3 1 1 60 17 17110235 17110254 GAAACCCTATGAATGTGACC 58 17110276 17110295 TTCTTGAAGATAGCCGTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kng2 ENSMUSG00000060459 ENSMUST00000115349,ENSMUST00000039338,ENSMUST00000100046 2 3 3 80 16 23012236 23024924 AGATTACTCCAGGTAAGGG 57 23012174 23012192 GATTATCTGCCGATATGGG 57 NA Mus musculus 50 Dcc ENSMUSG00000060534 ENSMUST00000114943,ENSMUST00000073379 3 2 2 80 18 71522648 71526709 GACTTTGAAAGTGGAACACC 59 71502395 71502414 GTATCAACTGGCCAATAACC 58 NA Mus musculus 50 Rps7 ENSMUSG00000061477 ENSMUST00000074267 1 1 1 101 12 29316563 29316581 ATTGTGGGTAAGAGGATCC 58 29316050 29316498 AGTTTCAACCTTGTGTTCC 58 NA Nonspecific Mus musculus 50 EG383232 ENSMUSG00000061532 ENSMUST00000039217 1 1 1 80 17 33284598 33284810 GAAATCCCGTGGATTTCTC 58 33284892 33284910 CTTGCATGATGTTGAAGGG 59 NA Mus musculus 50 Orm2 ENSMUSG00000061540 ENSMUST00000075341 1 1 1 99 4 63024101 63024119 CTTCGAGAGTATCACACCA 58 63024388 63024960 CTCCTCCTACATACTTGGAG 58 NA Mus musculus 50 Abpd ENSMUSG00000061795 ENSMUST00000079849 2 1 1 231 7 34150777 34151260 AACAGAAGCATGTCTTCCT 58 34149572 34149592 GTCAAGACCATAGTATGACAG 57 NA DesignNoJunction Mus musculus 50 Arf2 ENSMUSG00000062421 ENSMUST00000057921,ENSMUST00000063347,ENSMUST00000107008 1 3 3 126 11 103843024 103843042 TGACAGTAATGACCGAGAG 58 103843130 103844919 CATAGCATTAGGAAGATCCTG 57 NA Mus musculus 50 Kcnj15 ENSMUSG00000062609 ENSMUST00000113862,ENSMUST00000113861,ENSMUST00000037154,ENSMUST00000113859,ENSMUST00000113858,ENSMUST00000113863 1 6 9 67 16 95513500 95517212 CAGAGTGGTCCAAAGATGG 59 95517243 95517261 TTGGTATGCTTCACCAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr136 ENSMUSG00000062695 ENSMUST00000077203 1 1 1 60 17 38472946 38472964 AACTCCTACACTGAATCCA 57 38472988 38473006 TAAGGCACCCTTTACATCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Stat4 ENSMUSG00000062939 ENSMUST00000027277 2 1 1 80 1 52157238 52157256 TTTCATCCTATGTCGGTCG 59 52157297 52158710 TGTAGTTAGACTGAACTGTGAG 59 NA Mus musculus 50 Slc22a21 ENSMUSG00000063652 ENSMUST00000076493 2 1 1 80 11 53768242 53768260 GCGTTATTCTATGGCTGGT 59 53766676 53768199 TAATGTAGGTCTGAAGGCAC 59 NA Mus musculus 50 Klk1 ENSMUSG00000063903 ENSMUST00000075162 1 1 1 87 7 51484176 51484292 CCGTCAAATATGAATACCCAG 58 51484341 51484359 TTCTCTATGTGGGCTTTGG 59 NA Mus musculus 50 Brpf3 ENSMUSG00000063952 ENSMUST00000006088 1 1 3 149 17 28960970 28960988 TAGTTTGGGTCTCAGTGGA 59 28965378 28972716 GATCGATGATCTGAGCCAC 59 NA InUTR Mus musculus 50 mmu-let-7g ENSMUSG00000065440 ENSMUST00000083506 1 1 1 60 9 106081183 106081204 AGTAGTTTGTACAGTTTGAGGG 59 106081225 106081243 GCCTGTACAGTTATCTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Slc31a2 ENSMUSG00000066152 ENSMUST00000107468,ENSMUST00000107469,ENSMUST00000084530,ENSMUST00000107467 3 4 4 68 4 61957086 61957104 CTTCAGACAATAGGACCCG 59 61958034 61958052 GAATGACATGGACTAGGGA 58 NA DesignNoJunction Mus musculus 50 Igfl3 ENSMUSG00000066756 ENSMUST00000086089 2 1 1 103 7 18765357 18765378 CAAGCTTAAAGTTCATGGAGAG 59 18765615 18765636 GGTTGTCTTCAATATCTTCTCC 58 NA DesignNoJunction Mus musculus 50 Prb1 ENSMUSG00000067543 ENSMUST00000087853 1 1 1 85 6 132157199 132157217 TGGAAACAAAGAACAGCCA 59 132156874 132157151 TGTCTTCTGTTCACCTTCTC 59 NA InUTR Mus musculus 50 Ms4a15 ENSMUSG00000067571 ENSMUST00000087923 3 1 1 106 19 11053810 11054602 CTCAAACTAACGCATCTGTG 59 11053723 11053742 ATATGCCACGTTGTCATAGG 59 NA Mus musculus 50 EG635895 ENSMUSG00000067941 ENSMUST00000088809 3 1 1 61 17 14086562 14086580 CAGAAGGTTAGGCAAAGAG 57 14086605 14086623 TTTGGCTCGAAGAGTAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dok1 ENSMUSG00000068335 ENSMUST00000089651 1 1 1 86 6 82982044 82982232 GGGACAAGGTAATGTTCTC 57 82981976 82981994 CATTTCCCTGAGAAGTCTG 57 NA Mus musculus 50 Selenbp1 ENSMUSG00000068874 ENSMUST00000090839,ENSMUST00000116310 2 2 2 60 3 94746455 94746556 GAAATGCCTGGTTTGATCAC 59 94746579 94746597 TGAAGTAAAGGAAGCGGTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Gprin1 ENSMUSG00000069227 ENSMUST00000099506 3 1 1 120 13 54843452 54850931 GGATATCCGATACATGGCA 58 54841955 54841973 CTCAAGTCAGCTATCTGGT 58 NA DesignNoJunction, InUTR Mus musculus 50 Taar7e ENSMUSG00000069703 ENSMUST00000092656 1 1 1 63 10 23757916 23757934 AGTGCATCACTTTCTCCTG 59 23757960 23757979 GCTCCTGTGTAAATAAGGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mesdc1 ENSMUSG00000070462 ENSMUST00000094216 3 1 1 62 7 91030696 91030715 GCTATCTCAGGCTTTAAGGG 59 91030653 91030671 GAATTGGAATTCACTGGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001074704.1 ENSMUSG00000070576 ENSMUST00000094463 2 1 1 147 5 111850893 111883643 CAACAAAGAAGCCCATGAC 59 111883753 111883772 GATATCAGAGTGCAGAGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 3110048L19Rik ENSMUSG00000071267 ENSMUST00000091879 3 1 1 81 17 22070007 22070026 TCCTGAGATAGAAACTTGGA 57 22067445 22069964 GAATCTTAACAGACCCTTGG 57 NA InUTR Mus musculus 50 Gm960 ENSMUSG00000071691 ENSMUST00000096325 2 1 1 194 19 4663565 4663584 ACTGTCTGGTTATAAAGCAC 57 4654184 4659436 CATTCAGTACCTCACATAGC 57 NA InUTR Mus musculus 50 4930565B19Rik ENSMUSG00000072639 ENSMUST00000100746 1 1 1 60 5 122689465 122689484 AACCATATGTGTCACTAGCC 59 122689424 122689442 AACAAGGAACATTCCTGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 4930488E11Rik ENSMUSG00000072955 ENSMUST00000101228,ENSMUST00000113071 3 2 2 86 X 133509995 133510014 CAGAAGTTGAAACGTTTGAC 57 133508770 133509947 GCTGGATAGTTTCATTCGAC 58 NA Nonspecific Mus musculus 50 Med20 ENSMUSG00000073387 ENSMUST00000024778 2 1 1 82 17 47755938 47755957 ACCAGTATTGTGACTTCCTG 59 47756002 47759842 ATACTCCACCTCCACAGAG 59 NA Mus musculus 50 H2-Ke6 ENSMUSG00000073422 ENSMUST00000045467,ENSMUST00000114303 2 2 2 81 17 34163644 34163808 AGTGAAGGACAAGGTAACTG 59 34163390 34163409 CAAGAATGCAACCACATCTG 59 NA Mus musculus 50 ENSMUSG00000073459 ENSMUSG00000073459 ENSMUST00000097404 3 1 1 61 17 13398904 13398925 CTACATAGTGAGACACAGTCTC 59 13398947 13398965 AAGACATGCAACTATGGGT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 4933427I04Rik ENSMUSG00000073761 ENSMUST00000097896 1 1 1 60 4 123537567 123537585 ACTACAAAGCCACAAGGAC 59 123537609 123537627 TAGTGACATGTTGCCATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073778 ENSMUSG00000073778 ENSMUST00000097928 2 1 1 60 7 151766861 151766879 TCACTTCAAAGCCACTCAG 59 151766902 151766921 ATCTTGAAGTAGCTCCTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073789 ENSMUSG00000073789 ENSMUST00000097954 3 1 1 60 4 100693168 100693186 ATGGTGTTCCTGTAGTCAC 58 100693126 100693144 TACTGAAAGGTGACCAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073850 ENSMUSG00000073850 ENSMUST00000098069 3 1 1 60 4 55057295 55057316 GAAATCCAAATGAGACAATGGG 59 55057256 55057276 GGAAGAGTTGAACAGAAAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074408 ENSMUSG00000074408 ENSMUST00000098854 1 1 1 85 9 43933224 43933242 CAGAAGGTCCTTTCCTCTC 58 43933157 43933175 AACAAACAGAAGGCATGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ube2n ENSMUSG00000074781 ENSMUST00000099329 2 1 1 62 10 95004078 95004283 TTTGAAAGATAAGTGGTCCC 57 95004308 95004326 AAAGCCTGGATTGATAGCA 58 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000074883 ENSMUSG00000074883 ENSMUST00000099474 2 1 1 67 13 56703183 56703203 GGCACTTCACTTCTTATTTCC 59 56703232 56703250 ATATCCACGAAGCAGTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1312 ENSMUSG00000074947 ENSMUST00000099600 3 1 1 60 2 111882697 111882716 GCTTTCGTAGTAAACTTGCC 59 111882656 111882674 AGTCACAGTAGAAGCTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1138 ENSMUSG00000075149 ENSMUST00000099848 2 1 1 60 2 87577746 87577765 TCTACCTGTACATCACACCT 59 87577705 87577724 ACATGAAGAGCATAGTTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr987 ENSMUSG00000075223 ENSMUST00000111598,ENSMUST00000099929 2 2 2 60 2 85171744 85171762 ATGTTACAGCTACTAGCCT 57 85171702 85171721 TAGCAGCTAGGATGAAACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG629734 ENSMUSG00000075495 ENSMUST00000100353 2 1 1 85 14 80288381 80332971 CTTCAGATTTGCATGGCTG 59 80333019 80333038 GCTTATGACCAATGGTTACC 58 NA InUTR Mus musculus 50 1700001L05Rik ENSMUSG00000075511 ENSMUST00000100370 3 1 1 114 15 83194354 83195472 CCTAAGAATGGATGGTGTG 57 83194258 83194278 CTTTAGTGACCACTATGTGAC 58 NA InUTR Mus musculus 50 IGKV8-28 ENSMUSG00000076579 ENSMUST00000103380 3 1 1 93 6 70093724 70093743 CTAAACTGTTGATCTACGGG 57 70093650 70093669 ATGGTAAGAGTGAAATCGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG435328 ENSMUSG00000076729 ENSMUST00000103538 2 1 1 60 12 116842337 116842355 TGATTATGCTATGCACTGG 57 116842295 116842314 AACTCCAATCCACTCTAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001075440.1 ENSMUSG00000078137 ENSMUST00000104937 3 1 1 126 2 118528073 118528091 TTAGAGAACAACGCTCTGC 59 118527965 118527984 ACAGAGTGAACTTTACAGGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Q8CBC9_MOUSE ENSMUSG00000078431 ENSMUST00000099368 1 1 1 83 10 89536837 89539738 AGTGAAACTGTCACTGGAG 59 89539782 89539803 CAGATCTTCAAAGGAATAGTCC 58 NA DesignNoJunction Mus musculus 50 Lce1d ENSMUSG00000078658 ENSMUST00000029524 2 1 1 144 3 92489741 92489759 CCTCACAGATCTCTTCGTC 59 92489615 92489633 CTCATTGAGATCAGCAGCA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 U2af1l4 ENSMUSG00000078765 ENSMUST00000043273 1 1 1 188 7 31349308 31349498 TGTCTACGTTAAGTTCCGG 59 31349745 31349763 CGTAGGTGCATAAAGTTGC 59 NA Mus musculus 50 0610010B08Rik ENSMUSG00000078870 ENSMUST00000108965,ENSMUST00000099003,ENSMUST00000108964 2 3 3 63 2 176980441 176980459 GAGTCTCTACAAGGGTGTG 59 176980191 176980417 CCAAATGTAACCTATAGCTGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 0610010B08Rik ENSMUSG00000078881 ENSMUST00000108994,ENSMUST00000108993,ENSMUST00000108992 1 3 3 80 2 176277446 176277465 ATCCTTCTCAGAAGAGTCTC 57 176277505 176277731 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 Eif1a ENSMUSG00000079034 ENSMUST00000110152 1 1 1 62 12 88855400 88855421 AGAATCATCCTTCTATCGTCTC 58 88855444 88857540 CATTGACCTGGTGAGTACC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 4930449I24Rik ENSMUSG00000079091 ENSMUST00000110596 1 1 1 80 5 147337849 147337868 TATCACCATATTTCTTGGCG 57 147337910 147338466 GATGCATACGTTCTCATCAG 58 NA Nonspecific Mus musculus 50 Mphosph8 ENSMUSG00000079184 ENSMUST00000116468,ENSMUST00000022503 1 2 2 80 14 57309889 57312269 ACTTGGAGACACTTTCCAG 59 57312313 57312331 AAACAGGTTCCAGTAGAGC 59 NA Mus musculus 50 A2AK42_MOUSE ENSMUSG00000079250 ENSMUST00000099948,ENSMUST00000111736 1 2 2 60 2 83826692 83826711 ACATGGGTCTTCCTAAACTG 59 83826734 83826752 TCAAAGAATGGCTGGAGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Q1WJB5_MOUSE ENSMUSG00000079295 ENSMUST00000071391 3 1 1 82 6 129073126 129079339 AAGAAGAACTGATCACTGGTG 59 129079383 129079401 ATCACAGCTCTCAGAAACC 59 NA Mus musculus 50 MGI:1918654 ENSMUSG00000079417 ENSMUST00000060684 1 1 1 146 17 56970368 56970386 GACTGTTACTTACCAACGC 58 56969661 56969679 GAACAGAACAAACGCAGTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Aox3l1 ENSMUSG00000079554 ENSMUST00000114366 3 1 1 80 1 58411056 58411157 CATTGATATTGGGCAGATCG 58 58411200 58411218 TCTGGAGAGTAGAGTAGCT 57 NA Mus musculus 50 MGI:2147116 ENSMUSG00000079734 ENSMUST00000115772 1 1 1 81 17 6441744 6442708 CACTACCAGAACTCAGCTG 59 6441681 6441699 GAGAGTACACAAAGGCCAG 59 NA Nonspecific, InUTR Mus musculus 50 Scml2 ENSMUSG00000000037 ENSMUST00000074802,ENSMUST00000112345,ENSMUST00000112342 1 3 8 122 X 157672621 157675434 AATGCCAGCTCTTAGTGTG 59 157675519 157675538 GACTTCCTTGAAGTTTGAGC 59 NA Nonspecific Mus musculus 50 Scmh1 ENSMUSG00000000085 ENSMUST00000000087,ENSMUST00000106298,ENSMUST00000064991,ENSMUST00000106301 3 4 4 84 4 120189673 120195068 TACCTACCAGGTGAAACCT 59 120195116 120195134 TCAAGGCAGAATCCATCAG 59 NA Mus musculus 50 Itgb2l ENSMUSG00000000157 ENSMUST00000000161,ENSMUST00000113773 3 2 3 103 16 96644722 96646525 ATAAAGGAGAGCCTAGTGTG 58 96644638 96644656 ATACAGTAAACCAGCAGGA 57 NA Mus musculus 50 Drp2 ENSMUSG00000000223 ENSMUST00000113228,ENSMUST00000113226,ENSMUST00000000228,ENSMUST00000113224 2 4 4 81 X 130974894 130974914 GAGCATTGTCCTTTAAGACTG 58 130974956 130975783 ACTTGGCTGAAGAGATACTG 59 NA Mus musculus 50 2500003M10Rik ENSMUSG00000001017 ENSMUST00000076639,ENSMUST00000107342 2 2 8 117 3 90307190 90310037 TTAAGCAGAGCTTAAAGCAG 58 90307092 90307110 CTCTGGATTATGGGTAGGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Tnk1 ENSMUSG00000001583 ENSMUST00000001626,ENSMUST00000108631,ENSMUST00000102583,ENSMUST00000094063,ENSMUST00000108628,ENSMUST00000108626 3 6 6 81 11 69669465 69669484 GTCATGATGAAGCTAGAGCA 59 69669296 69669423 GTTCCATCACCATCTGTAGAG 59 NA Mus musculus 50 Clpb ENSMUSG00000001829 ENSMUST00000106998 1 1 3 119 7 108855091 108859933 TCTCTGGAAGATGGGAGAC 59 108871220 108871238 ATCCTCTCGAGTGACTAGG 59 NA Mus musculus 50 Ltbp1 ENSMUSG00000001870 ENSMUST00000001927,ENSMUST00000112516,ENSMUST00000112514 2 3 5 100 17 75626567 75648237 ACCATTGGATCACAGTGTG 59 75648300 75648319 TTCTGGCATTTGTTAAAGCC 59 NA Mus musculus 50 Crhr2 ENSMUSG00000003476 ENSMUST00000114374,ENSMUST00000095897 2 2 4 114 6 55067409 55067427 CATCAAGTACAACACGACC 58 55053263 55054727 CTTTCTCTGCTTGTCATCC 58 NA Mus musculus 50 Hnrnpa2b1 ENSMUSG00000004980 ENSMUST00000114459,ENSMUST00000116609,ENSMUST00000090002 1 3 4 98 6 51414491 51414509 AAGAGGAGGATATGGTGGT 59 51414195 51414431 CCACTTCCATAATTTCCTCCT 59 NA Mus musculus 50 Clcnkb ENSMUSG00000006216 ENSMUST00000105788,ENSMUST00000006378 1 2 3 80 4 140966690 140967314 CTTCAACAATGAACAGGAGAC 59 140966630 140966649 ATCTCTGGTAAGTCAAAGGG 58 NA Mus musculus 50 Tek ENSMUSG00000006386 ENSMUST00000071168 2 1 3 92 4 94518558 94520070 TCCAGAACAGAGAAGAACC 58 94520126 94520144 GATAAATTGTGGGATCCGG 57 NA Mus musculus 50 Nelf ENSMUSG00000006476 ENSMUST00000116574 2 1 9 117 2 24911647 24912629 GGAGTGTCTGATGATGTCC 59 24913762 24913780 TGAATACCCTGAGAAACCG 58 NA Mus musculus 50 Nelf ENSMUSG00000006476 ENSMUST00000114388,ENSMUST00000114392,ENSMUST00000006646,ENSMUST00000114381 2 4 9 81 2 24912688 24913782 TATGCAAGCGGTATTCAGG 59 24913826 24914544 GTTCCTCTGGATTACAGACG 59 NA Mus musculus 50 2610028H24Rik ENSMUSG00000009114 ENSMUST00000092406,ENSMUST00000105415 1 2 2 80 10 75917554 75920256 TATTAAGGAAGACATGGTGGAG 59 75920297 75920315 TTGAGCATCATGTTCTGCA 59 NA Mus musculus 50 Pou6f2 ENSMUSG00000009734 ENSMUST00000041343 1 1 2 82 13 18221021 18231397 CCAGTTAGTCAGCAATCCT 58 18220957 18220975 AAGCTTTGGCAAATTCTCG 59 NA Mus musculus 50 Aldh3a2 ENSMUSG00000010025 ENSMUST00000108715 2 1 5 84 11 61062416 61062434 AGTTCAACAAAGGAAGGCT 59 61061971 61062369 CGTTCCAGAACAAACTTGAC 59 NA Mus musculus 50 Rassf1 ENSMUSG00000010067 ENSMUST00000093786,ENSMUST00000010211 2 2 2 88 9 107459815 107459834 TTTCTCAAGCTGAGACTGAG 59 107459885 107460115 GGAGCCATCCTTATTCAGG 59 NA Mus musculus 50 1700027A23Rik ENSMUSG00000010136 ENSMUST00000010280 2 1 2 156 3 105804142 105817346 GGGAAGGTGAATAATTACTCC 57 105803379 105804024 AACCATTCCAATCTGTTGC 58 NA Mus musculus 50 Rbm25 ENSMUSG00000010608 ENSMUST00000048155 1 1 2 100 12 84987246 84989160 CTCTTAGCTAAATGTGGTTTGG 59 84992249 84992270 GATTCAGGCTCTTTATACTCAC 58 NA Mus musculus 50 Camta1 ENSMUSG00000014592 ENSMUST00000058864,ENSMUST00000105668,ENSMUST00000105670 2 3 6 111 4 150457961 150458680 CCAATCCAGTACAGGTGAC 59 150457868 150457886 CTGTTAGCCAACATCAGGA 59 NA Mus musculus 50 Kif1a ENSMUSG00000014602 ENSMUST00000086819 3 1 2 80 1 94933450 94933468 TCAACATCCTCTCATCAGG 58 94922302 94923416 GGTAGAAGGTCCTAGTGTC 58 NA Mus musculus 50 Oc90 ENSMUSG00000015001 ENSMUST00000060522 3 1 4 87 15 65719669 65719687 ATACCAGTCAGATAGCCCT 59 65715427 65719153 TGAACAGACTTTGTTCTGGA 59 NA Mus musculus 50 Kcnq2 ENSMUSG00000016346 ENSMUST00000103051,ENSMUST00000103049,ENSMUST00000080022 2 3 10 87 2 180839652 180839670 ATGCTACTAACCTCTCACG 58 180838368 180839601 GTTTGTGAGCTGTACATGG 58 NA Mus musculus 50 Slc35c2 ENSMUSG00000017664 ENSMUST00000109300,ENSMUST00000109299,ENSMUST00000109298,ENSMUST00000017808 2 4 5 188 2 165108373 165108391 GTCATCTTCCTCTTCTCCG 59 165106865 165107583 TTTGGTCATCGTGTACAGG 59 NA Mus musculus 50 Cadps2 ENSMUSG00000017978 ENSMUST00000018122,ENSMUST00000069074,ENSMUST00000115357 3 3 8 80 6 23273430 23278798 CTTTATATGAGTCCACCAATGG 58 23273371 23273389 CAAAGACGAACATTTGCAG 57 NA Mus musculus 50 Mapt ENSMUSG00000018411 ENSMUST00000018555,ENSMUST00000106989 2 2 10 98 11 104151287 104151308 GAGATCCCAGAAGGAATTACAG 59 104156231 104159822 CTTCTCCGGTTCTTGAGTC 59 NA Mus musculus 50 Ikzf1 ENSMUSG00000018654 ENSMUST00000109674 1 1 9 80 11 11654113 11654131 CCATCTTTGCAACTATGCC 59 11654173 11661237 GTTTCTTCCTTAATGACGGAG 58 NA Mus musculus 50 Cdk5rap3 ENSMUSG00000018669 ENSMUST00000018813 1 1 3 80 11 96774363 96774709 CACAACGGATGAAAGATTGG 59 96774302 96774321 CCTTTAGGGCAACTTTACCT 59 NA Mus musculus 50 Akt3 ENSMUSG00000019699 ENSMUST00000019843,ENSMUST00000111159,ENSMUST00000111160 2 3 3 81 1 178973984 178980177 AAATAAACGCCTTGGTGGA 59 178973921 178973940 ATCTTGCCAGTTTACTCCAG 59 NA Mus musculus 50 2410017P07Rik ENSMUSG00000019813 ENSMUST00000105505,ENSMUST00000105504,ENSMUST00000019951 1 3 3 87 10 41439702 41441370 AAGACAGTGTCCGTAAACTG 59 41439634 41439653 TTAGATCCTTTAGGGTTGCC 59 NA Mus musculus 50 Hebp2 ENSMUSG00000019853 ENSMUST00000020000 2 1 1 97 10 18264896 18264914 AATGGCTACATTCAAGGCA 59 18264185 18264203 TCACTGAAAGGACTTGAGC 59 NA DesignNoJunction Mus musculus 50 Epb4.1l2 ENSMUSG00000019978 ENSMUST00000092645,ENSMUST00000092644 2 2 8 83 10 25208826 25208844 ATACTACCATCCAGGATGG 57 25208891 25221639 CATGTGAACTCTTTCCCTC 57 NA Mus musculus 50 Aifm2 ENSMUSG00000020085 ENSMUST00000105456,ENSMUST00000105455,ENSMUST00000099706,ENSMUST00000067857,ENSMUST00000080099 2 5 5 95 10 61190885 61190903 CTCACAATTCATCGTGGTG 58 61190961 61195081 ATAAGAGTGACCTCCTTCTC 57 NA Mus musculus 50 Mare ENSMUSG00000020289 ENSMUST00000109389,ENSMUST00000109390,ENSMUST00000020530,ENSMUST00000093212 1 4 4 120 11 32133990 32134008 GAGGATGACAGAGAACCTG 59 32133101 32133906 GAAGTAGTGAAGGAGCCTG 59 NA Mus musculus 50 Limk2 ENSMUSG00000020451 ENSMUST00000101642,ENSMUST00000102958,ENSMUST00000101638,ENSMUST00000093394,ENSMUST00000110029 1 5 6 190 11 3253441 3253459 AACAGCATCTCCAAGTCTC 59 3252370 3253287 TTGTGAGTCACCTTGATGG 59 NA Mus musculus 50 Myocd ENSMUSG00000020542 ENSMUST00000108695,ENSMUST00000102635,ENSMUST00000092999,ENSMUST00000101042 2 4 4 75 11 65009884 65014303 CTGTAAAGTCCAAGTCTTTGG 58 65009829 65009847 TTCTTCACCTTTGGTTTGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Sypl ENSMUSG00000020570 ENSMUST00000076698,ENSMUST00000020885 1 2 2 82 12 33659117 33659135 ATCCAGAATCAGGAGTGTC 58 33659181 33660469 CAGAAAGCCAAAGATCACG 59 NA Mus musculus 50 Acly ENSMUSG00000020917 ENSMUST00000100457,ENSMUST00000107387 3 2 5 85 11 100380476 100380940 GGACAAGAAAGAGGTCCTG 59 100380409 100380428 GGTTGATCTCAAGGTAGGTG 59 NA Mus musculus 50 Garnl1 ENSMUSG00000021027 ENSMUST00000110687 1 1 2 82 12 56713676 56713694 GCCAACAACATTTGAAGAC 57 56713082 56713630 CTTAATGATCTGCGTCAGC 58 NA Mus musculus 50 Klc1 ENSMUSG00000021288 ENSMUST00000021717 1 1 4 86 12 113033769 113044653 GATCTTTAAAGCGCAGTGC 59 113044703 113044721 CCAAGACCCTACTAGAGGT 59 NA Mus musculus 50 1300014I06Rik ENSMUSG00000021411 ENSMUST00000053459 1 1 2 100 13 34730098 34730116 AAGATCGCCTTTGGATCAG 59 34722314 34730036 CATTGGACCTCATGATTTCTG 59 NA Mus musculus 50 Slc6a18 ENSMUSG00000021612 ENSMUST00000022105,ENSMUST00000109679 1 2 3 101 13 73804500 73805590 TTTCTGGATAAGAGTGCCTC 59 73804418 73804436 AAAGAAGAGCACAGACCAC 59 NA Mus musculus 50 Vcan ENSMUSG00000021614 ENSMUST00000109544 3 1 6 122 13 89824787 89842530 CAAGACAGGACCTGATCTC 59 89824118 89824701 TCAAGTTCACACTGGTCTC 59 NA Mus musculus 50 Nln ENSMUSG00000021710 ENSMUST00000063812 1 1 3 154 13 104825791 104826539 TATTGGGCACAAATATGCC 58 104815149 104825673 TTTCATTCCAACCTCTGGA 58 NA Mus musculus 50 Stk3 ENSMUSG00000022329 ENSMUST00000018476,ENSMUST00000067033 1 2 2 80 15 34929632 34929651 ATGGAAATCAAAGCCAAACG 59 34888817 34929589 CAGCTCATCTTCATCCGAG 59 NA Mus musculus 50 Stk3 ENSMUSG00000022329 ENSMUST00000018476 3 1 2 84 15 35044333 35044351 CAAGTACCTGTTGAGTCAG 57 35029287 35044286 ACTTCACAACATATGGACTG 57 NA Mus musculus 50 Ptk2 ENSMUSG00000022607 ENSMUST00000110036,ENSMUST00000057684 2 2 5 108 15 73107333 73122473 CTGTGTCAGAGACAGATGAC 59 73104972 73104993 CGTCCAAGTTCTATTCTTTCTC 58 NA Mus musculus 50 Aifm3 ENSMUSG00000022763 ENSMUST00000115685,ENSMUST00000100128 3 2 3 80 16 17506360 17506378 GATCCCATCGTATCCAAGG 59 17506421 17507004 TAGCATAAACAACTCCACCT 58 NA Mus musculus 50 Dnm1l ENSMUSG00000022789 ENSMUST00000047122 2 1 4 82 16 16318910 16318930 CTAAAGTTCCAAGTGCTTTGG 59 16318562 16318868 CTGAATTAACTTGCCATCAGC 59 NA Mus musculus 50 Mospd1 ENSMUSG00000023074 ENSMUST00000096447,ENSMUST00000023836 1 2 2 144 X 50709040 50710595 TGTGGATATTGTGATTCGTC 57 50708915 50708933 TTTAGCAGATGGGAGAAGG 58 NA Mus musculus 50 Ivns1abp ENSMUSG00000023150 ENSMUST00000023918,ENSMUST00000111887 1 2 3 80 1 153201153 153201171 ACGCTTATATTCAGGAGCA 58 153201213 153201773 TTACCTCCAACTTTAGTCTCG 59 NA Mus musculus 50 Il15ra ENSMUSG00000023206 ENSMUST00000114831 1 1 7 111 2 11641729 11645153 AAAGGAACTACAGGGACAG 58 11645225 11645731 GAGAAATCTCTGTTATCCTGAG 57 NA Mus musculus 50 Zscan10 ENSMUSG00000023902 ENSMUST00000115509,ENSMUST00000115507 2 2 4 122 17 23742877 23742895 GGTGGTACAGCTATTGGAG 59 23745124 23746243 CTTCCAAATCCAAGAGGGT 59 NA Mus musculus 50 Pgc ENSMUSG00000023987 ENSMUST00000024782 3 1 2 87 17 47869377 47869395 GACGAGAACCTGTACACTG 59 47869444 47869920 CAATAAGGAAGTCGTCAATGG 59 NA Mus musculus 50 Mtch1 ENSMUSG00000024012 ENSMUST00000095427,ENSMUST00000114693 3 2 2 84 17 29476781 29477025 CATCCCTTACACGTGATCTC 59 29475727 29475746 CAATAGAACTCAGCACACCA 59 NA Mus musculus 50 Myo1f ENSMUSG00000024300 ENSMUST00000087605 2 1 2 134 17 33738994 33739013 CTCTCACTATCAGCATTGGG 59 33739545 33741210 GATTCAAACCTCTGGGAGG 59 NA Mus musculus 50 Mep1b ENSMUSG00000024313 ENSMUST00000082235 2 1 2 181 18 21233440 21234170 TGTCAAAGACATAGATGGAGG 59 21238999 21242588 CATTCATTTCCAAGCTGTCC 59 NA Mus musculus 50 Mbd1 ENSMUSG00000024561 ENSMUST00000025446,ENSMUST00000097530 3 2 3 195 18 74436959 74436977 CAGATCCAGACCTTTCACC 59 74437223 74441541 TTATGTAGCCTTGGCAACC 59 NA Mus musculus 50 Cd74 ENSMUSG00000024610 ENSMUST00000097563 2 1 2 97 18 60970065 60970960 ACCTAAAGTACTGACCAAGTG 59 60971018 60971037 AATAGTTACCGTTCTCGTCG 59 NA Mus musculus 50 6330577E15Rik ENSMUSG00000025066 ENSMUST00000099353,ENSMUST00000099354,ENSMUST00000099352 3 3 3 93 19 47808394 47809326 GAATAAAGAACGACGTGACTG 59 47809381 47809399 GACATGATAGACTGCAGCT 59 NA Mus musculus 50 Ablim1 ENSMUSG00000025085 ENSMUST00000111559,ENSMUST00000111558,ENSMUST00000111555,ENSMUST00000079360,ENSMUST00000111546,ENSMUST00000111541 3 6 15 93 19 57123991 57125629 CATGTTCCAGATCAAGGGA 58 57121520 57121539 TATCTTCTGAAGCCTTGCTC 59 NA Mus musculus 50 Il23a ENSMUSG00000025383 ENSMUST00000026449 3 1 1 88 10 127734147 127734165 CCTCCCTACTAGGACTCAG 59 127733975 127733993 CTGCTGACTAGAACTCAGG 59 NA DesignNoJunction Mus musculus 50 Crygf ENSMUSG00000025945 ENSMUST00000027082 2 1 1 70 1 65973422 65973440 GGGTTTCAGTGACTCTGTC 59 65974554 65974572 CGTAGATCCTGATCCTGTG 58 NA DesignNoJunction Mus musculus 50 1110028C15Rik ENSMUSG00000026004 ENSMUST00000042389 2 1 3 80 1 66775069 66775088 AATAAGGTCACAACCATCTG 57 66773373 66775026 CTTTCTCCTGCTAATGCTG 58 NA Mus musculus 50 Col9a1 ENSMUSG00000026147 ENSMUST00000054588,ENSMUST00000084261 3 2 4 85 1 24186132 24186153 CCAATTCCATTTCTAATGGTGG 59 24186198 24186330 AGAAATCAGGTCAAACCCTG 59 NA Mus musculus 50 Col9a1 ENSMUSG00000026147 ENSMUST00000054588,ENSMUST00000088349,ENSMUST00000115252 2 3 4 97 1 24246147 24246165 GAGAATGGTTTCCCTGGTC 59 24246226 24251206 CCCAAGTCTCCTTTAGGTC 58 NA Mus musculus 50 Ngef ENSMUSG00000026259 ENSMUST00000068681,ENSMUST00000027477 2 2 2 83 1 89381240 89382740 GCTGGTCCAGAATATCCTG 59 89381175 89381193 ATTTCTAGCTCCTTGTGGG 58 NA Mus musculus 50 1810030J14Rik ENSMUSG00000026531 ENSMUST00000027816 3 1 1 60 1 176262842 176262860 TGGCAACCTTATAAACTGG 57 176262884 176262902 CTTAGTCACCACATAGCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc19 ENSMUSG00000026546 ENSMUST00000085894,ENSMUST00000111226 2 2 2 81 1 174460070 174462217 GTCAGAGAACTCATTGTTCC 58 174462261 174462279 ATTTGATCCGCTCAAACTC 58 NA Mus musculus 50 Odf2 ENSMUSG00000026790 ENSMUST00000113757 2 1 13 148 2 29748609 29748627 GATGAGAACACTCCTGTCC 59 29749027 29756610 CAATGAGGTGGATTCTTGGT 59 NA Mus musculus 50 Slc25a25 ENSMUSG00000026819 ENSMUST00000028160,ENSMUST00000052119 3 2 6 88 2 32276846 32276864 TGTCAAGATCTCGGAACAG 59 32275926 32276185 TCTTATCCATGTAGGTGACAG 58 NA Mus musculus 50 Ralgds ENSMUSG00000026821 ENSMUST00000113894,ENSMUST00000028170,ENSMUST00000113893,ENSMUST00000100241,ENSMUST00000113892 1 5 5 80 2 28403129 28403641 GACTATCTCTATGGGAGACTG 58 28403921 28403939 CTGTAGCAACTTGATCTGG 57 NA Mus musculus 50 Lamc3 ENSMUSG00000026840 ENSMUST00000028187 1 1 2 120 2 31781256 31781512 CATTTCTGGCAAGTCTTCAG 59 31784329 31784347 GAGGTAGCTTCGATCTTGG 59 NA Mus musculus 50 Sdccag3 ENSMUSG00000026927 ENSMUST00000114102,ENSMUST00000100296 1 2 7 130 2 26244465 26244483 TTATGTGCTATGTGCCCAG 59 26243178 26244016 TTCAAGTTTGTCACCTCCA 58 NA Mus musculus 50 Atf2 ENSMUSG00000027104 ENSMUST00000055833,ENSMUST00000112017,ENSMUST00000112016,ENSMUST00000100009 2 4 10 89 2 73689033 73691863 TCATTGTGGCTGATCAGAC 59 73688962 73688980 CAAATGGACTTGCCAACTC 59 NA Mus musculus 50 Tubgcp4 ENSMUSG00000027263 ENSMUST00000110658,ENSMUST00000039541,ENSMUST00000110657 3 3 3 81 2 121018137 121019687 CTATCTCCAGGTAGATGTGC 59 121019731 121019749 GATGCTTTCAAAGTCCCTC 58 NA Mus musculus 50 Prei4 ENSMUSG00000027346 ENSMUST00000063729,ENSMUST00000028822,ENSMUST00000060955,ENSMUST00000110136,ENSMUST00000110137,ENSMUST00000110142 2 6 7 82 2 132368032 132368050 GATGTCCACCTTTCAAAGG 58 132366088 132367989 GCTTCATATTTCCTCTTCATGG 59 NA Mus musculus 50 Stard7 ENSMUSG00000027367 ENSMUST00000069099,ENSMUST00000110375,ENSMUST00000028845 1 3 4 80 2 127117979 127121231 TTGATGAGAATGGCTTTGAC 58 127121274 127121292 TCCAACTGACACAGTATCG 59 NA Mus musculus 50 Lpin3 ENSMUSG00000027412 ENSMUST00000109455 1 1 4 80 2 160725556 160727577 CTTACCTGAGCACAGTTCC 59 160728307 160728325 TCGCTGCTTAAGACTTCTG 59 NA Mus musculus 50 Gnas ENSMUSG00000027523 ENSMUST00000109096 1 1 14 152 2 174110971 174159723 GGATAAAGGTGCTGGAGAG 59 174167162 174167180 ATGTCCTGCACTTTAGTGG 59 NA InUTR Mus musculus 50 Phactr3 ENSMUSG00000027525 ENSMUST00000108917,ENSMUST00000108916,ENSMUST00000103066,ENSMUST00000029031,ENSMUST00000108915,ENSMUST00000108914,ENSMUST00000103065 2 7 7 84 2 178066339 178067539 CAAGAAAGCTTAACCAGAGAC 58 178067583 178067603 GCTACTTCCACATAATCACTG 58 NA Mus musculus 50 Rbm39 ENSMUSG00000027620 ENSMUST00000109587 1 1 3 111 2 155984778 155984796 AGTTAATGGCAAGACTTGC 58 155980016 155984144 AAAGAGAATTCTGCCACAG 57 NA Mus musculus 50 Pmf1 ENSMUSG00000028066 ENSMUST00000056370,ENSMUST00000090958 1 2 3 79 3 88203666 88203684 GACGCAGAGGATCTATGAC 59 88203130 88203149 CCTCCTCTTTGATTTCTGAG 57 NA DesignNoJunction Mus musculus 50 Rap1gds1 ENSMUSG00000028149 ENSMUST00000098574 1 1 2 82 3 138646828 138678523 ATGCTACGATAGCCATGAG 58 138646764 138646782 ACAGCGACCTTAAATGGTC 59 NA Mus musculus 50 Epha7 ENSMUSG00000028289 ENSMUST00000108191 2 1 4 102 4 28870515 28874695 ACTCTACTTTCATTGCACCA 59 28874760 28874778 AATACAGGAGGCATCTAGC 58 NA Mus musculus 50 Jmjd2c ENSMUSG00000028397 ENSMUST00000077851,ENSMUST00000030102 1 2 3 80 4 73917205 73917223 CACGCAATACAACATCCAG 59 73917266 73926812 GGAGTACAGTATTTGCTGCT 59 NA Mus musculus 50 Slc44a1 ENSMUSG00000028412 ENSMUST00000102911,ENSMUST00000107651,ENSMUST00000107647,ENSMUST00000107645 2 4 5 65 4 53573971 53573989 AATACAATGATGGGAGCCC 59 53574018 53576025 TTTCCACAAACTCCATCAG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Unc13b ENSMUSG00000028456 ENSMUST00000079978 3 1 6 100 4 43114714 43114732 GAGCAAATCAATGCCTTGG 59 43128024 43178625 TCTTCAAAGGAACACTGGG 59 NA Mus musculus 50 2810410C14Rik ENSMUSG00000028621 ENSMUST00000106758,ENSMUST00000106760,ENSMUST00000094921,ENSMUST00000030364,ENSMUST00000106756 1 5 5 80 4 106743557 106743575 TTGTCCGGTTTACACTACC 59 106743618 106746491 CATCTACTACACCTCGTAGG 58 NA Mus musculus 50 0610037D15Rik ENSMUSG00000028689 ENSMUST00000106462,ENSMUST00000106463,ENSMUST00000106464 1 3 4 90 4 116385355 116385373 ATGGACAGGGTTCATACCT 59 116385427 116386706 GACTGACTTCAGAGCTGAG 59 NA Mus musculus 50 Hspg2 ENSMUSG00000028763 ENSMUST00000030547,ENSMUST00000097839 2 2 2 80 4 137125266 137125412 CATCATCTACATTGGTGGTG 58 137125455 137125473 TTGATACAGCCTGTGATCC 59 NA Mus musculus 50 Gmeb1 ENSMUSG00000028901 ENSMUST00000105965,ENSMUST00000030733,ENSMUST00000105964 2 3 3 80 4 131798288 131798306 GGAGAGTAAAGCTGTCCTC 59 131793116 131798245 AGCTGGTCATTAAACTTGAC 58 NA Mus musculus 50 Mfn2 ENSMUSG00000029020 ENSMUST00000105716,ENSMUST00000030884,ENSMUST00000105715 2 3 4 81 4 147251186 147252832 AAGTCCAGCAGGAATTGTC 59 147251123 147251144 ATTTCCTGCTCCAGATTATCTC 59 NA Mus musculus 50 Atad3a ENSMUSG00000029036 ENSMUST00000030903,ENSMUST00000105594 1 2 2 137 4 155127738 155128001 GAGTCTATCAGGACAGCTG 58 155125645 155125664 AGAAGTAGCATTCTTTGCAG 58 NA Mus musculus 50 Gpr125 ENSMUSG00000029090 ENSMUST00000030971 2 1 2 80 5 50378764 50378782 TGGAAACCTGGATAAGCAG 59 50370802 50378720 ATGATGGTGTTCTTCAGGG 59 NA Mus musculus 50 Tbc1d14 ENSMUSG00000029192 ENSMUST00000101273,ENSMUST00000031094 2 2 3 81 5 36850349 36851020 GATGTGGGTTATGTTCAGG 57 36850286 36850304 AAGCAATAAAGGCATCTGC 58 NA Mus musculus 50 Epha5 ENSMUSG00000029245 ENSMUST00000113406,ENSMUST00000113411,ENSMUST00000113401 1 3 8 85 5 84579421 84579439 CAAATTCGAGCACGTACAG 59 84571393 84579372 TTAGATGCTGCAAACACTG 58 NA Mus musculus 50 Pus1 ENSMUSG00000029507 ENSMUST00000031481,ENSMUST00000112426,ENSMUST00000086643,ENSMUST00000031483,ENSMUST00000100906 1 5 5 86 5 111204614 111204632 TATCCCTAAAGGTGTGGCT 59 111204224 111204564 TCTTCAATCCCAGAATCCG 59 NA Mus musculus 50 Pop7 ENSMUSG00000029715 ENSMUST00000111035,ENSMUST00000031728 3 2 2 85 5 137943156 137943174 AAGACTGACTTTAAGGCCC 59 137943089 137943107 TAGATTTCAGTGCATGCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc37a3 ENSMUSG00000029924 ENSMUST00000090243 3 1 2 120 6 39309949 39309968 TTCTGTTCTCCTATGCTGTG 59 39305105 39307401 GTACCAAAGACAAACACCAC 59 NA Mus musculus 50 Caprin2 ENSMUSG00000030309 ENSMUST00000111569,ENSMUST00000072324 3 2 2 81 6 148794726 148794744 TTCAAGTGGGAATTACAGC 57 148793746 148794684 CTGGAAATTATCCCTTTGAGAG 58 NA Mus musculus 50 Nr2f2 ENSMUSG00000030551 ENSMUST00000089565,ENSMUST00000032768 2 2 2 63 7 77502670 77502688 GAGTATAGCTGCCTCAAGG 59 77499794 77499813 CTACATCAGACAGACCACAG 59 NA DesignNoJunction Mus musculus 50 Nox4 ENSMUSG00000030562 ENSMUST00000068829 2 1 3 135 7 94522913 94522932 GTCAAACAGATGGGATTCAG 58 94524789 94544194 CCTTGATCTTCAAACCCTC 57 NA Mus musculus 50 Isg20l1 ENSMUSG00000030609 ENSMUST00000107425,ENSMUST00000107421,ENSMUST00000051175,ENSMUST00000107423 2 4 5 119 7 86047709 86050740 AGAAGGAGATCCTTAAGCTG 58 86050822 86050840 GGACATAAGTGGTATCCCG 59 NA Mus musculus 50 Pde2a ENSMUSG00000030653 ENSMUST00000084894,ENSMUST00000098241,ENSMUST00000032889 2 3 4 87 7 108652956 108653097 GACGATGAGAGTTATGAGATCC 59 108653145 108653163 CTGGGATGTTCAGGATCTG 59 NA Mus musculus 50 Parva ENSMUSG00000030770 ENSMUST00000106643 3 1 3 132 7 119571607 119687703 CAAAGAAGTATCCGAGTTCCA 59 119688263 119688281 GTTTGGATCGACCATTGTC 58 NA Mus musculus 50 Trat1 ENSMUSG00000030775 ENSMUST00000071647 2 1 2 90 16 48761541 48761559 GGACTTCTAGCCTTCTTGG 59 48742365 48761487 TCATCAACTCTCGTCTCTG 58 NA Mus musculus 50 Tnni2 ENSMUSG00000031097 ENSMUST00000105971,ENSMUST00000105973 1 2 3 94 7 149629258 149629276 CCGAGAATCTGAGAAGGAG 58 149629334 149629491 GTTGTTTGCAGAGTTCCTG 59 NA Mus musculus 50 Smarca1 ENSMUSG00000031099 ENSMUST00000101616,ENSMUST00000077569,ENSMUST00000088973 1 3 6 80 X 45211481 45211499 TTATTGTATGTGGCGTGGT 59 45207882 45211437 GCATCTATCGCTTCCTCTC 59 NA Mus musculus 50 Smarca1 ENSMUSG00000031099 ENSMUST00000101616,ENSMUST00000077569,ENSMUST00000088973 3 3 6 82 X 45211482 45211501 GATTATTGTATGTGGCGTGG 59 45207882 45211437 GCATCTATCGCTTCCTCTC 59 NA Mus musculus 50 Cacna1f ENSMUSG00000031142 ENSMUST00000115726,ENSMUST00000070893 2 2 4 110 X 7204030 7204822 AGAAGTCAATAACGGAGGC 59 7205090 7205109 TTACTCAGAAGCTTGACCAG 59 NA Mus musculus 50 Gata1 ENSMUSG00000031162 ENSMUST00000033502,ENSMUST00000115641 2 2 2 159 X 7540255 7540273 TCACCATCAGATTCCACAG 58 7539660 7540133 GATACACCTGAAAGACTGGG 59 NA InUTR Mus musculus 50 Phka2 ENSMUSG00000031295 ENSMUST00000112377,ENSMUST00000112380,ENSMUST00000033652 2 3 4 80 X 157012592 157012613 CCAACTAAAGTTCTAAGTGGAC 58 157012654 157013720 TTCAGGAGTCGTCTTTAGG 58 NA Mus musculus 50 Atp2b3 ENSMUSG00000031376 ENSMUST00000088429,ENSMUST00000114479,ENSMUST00000033744 1 3 4 80 X 70793107 70793125 GCAGTTTCAGTTGACAGTC 58 70793169 70796304 TTGAGAGGAGAGTCCTGAG 59 NA Mus musculus 50 Pgr ENSMUSG00000031870 ENSMUST00000098986,ENSMUST00000070463 3 2 3 84 9 8961546 8964994 TGCATGATCTTGTGAAACAG 58 8965041 8965059 ATTTCCGGAAATTCCACAG 57 NA Mus musculus 50 Chrna3 ENSMUSG00000032303 ENSMUST00000034851,ENSMUST00000114316 3 2 2 93 9 54870084 54871960 TGAAGCAAATCTGGAATGAC 58 54870010 54870028 TTCCAGATCTTCTCTGCAG 58 NA Mus musculus 50 2310046O06Rik ENSMUSG00000032305 ENSMUST00000093833,ENSMUST00000114200 3 2 2 129 9 57385622 57385640 TTCCATTCAGGCTAAGCTG 59 57386620 57386639 GCCCTTGTTAAACTTCACTG 59 NA DesignNoJunction Mus musculus 50 Impg1 ENSMUSG00000032343 ENSMUST00000113250 3 1 2 80 9 80334310 80334328 CTAACATCTGTCCACAGGA 58 80329061 80334268 CTTCTTGACATACTCTCAGTC 57 NA Mus musculus 50 Acpp ENSMUSG00000032561 ENSMUST00000062723,ENSMUST00000112590 2 2 2 111 9 104226523 104226982 GCATGATCAGATTTATATCCGG 58 104226433 104226451 TCTAGGATTCCAGATGCTG 58 NA Mus musculus 50 Oas2 ENSMUSG00000032690 ENSMUST00000081491 3 1 2 100 5 121183491 121183509 CTTCTAGCTGAAGAAGCGA 59 121183225 121183427 AGATCTCTAGGTACTGGCA 58 NA Mus musculus 50 Centd2 ENSMUSG00000032812 ENSMUST00000107011,ENSMUST00000107010,ENSMUST00000098246,ENSMUST00000084896,ENSMUST00000084895 3 5 6 83 7 108535359 108535623 TTTGACAGTAACAAGGACG 57 108535670 108535688 CTTCTGGTCTCCAATAGGA 57 NA Mus musculus 50 Acsl3 ENSMUSG00000032883 ENSMUST00000113521,ENSMUST00000035779,ENSMUST00000012393 1 3 3 83 1 78684982 78686854 CTTCCAGCTTGTTACACTG 58 78686901 78686919 ATGATGTTGGTCACCTCTG 59 NA Mus musculus 50 Stch ENSMUSG00000032932 ENSMUST00000046283 1 1 2 80 16 75759705 75759723 GGAACTCTTGATGTGTCGT 59 75758677 75759662 TCCAAGTTTGTTGTTTCCAG 58 NA Mus musculus 50 Myh2 ENSMUSG00000033196 ENSMUST00000018641 3 1 2 80 11 67004958 67005199 AGGAAGTAAAGGCTGAACTG 59 67005241 67005260 CCGTCTCATATTTGGTCCTC 59 NA Mus musculus 50 Stk36 ENSMUSG00000033276 ENSMUST00000087183,ENSMUST00000113699,ENSMUST00000087186 1 3 5 80 1 74655826 74657355 CTGCTTCAAGAACTTCTTGC 59 74657398 74657416 GGGTGATGTAAGAGGTCTG 59 NA Mus musculus 50 Tnxb ENSMUSG00000033327 ENSMUST00000055067,ENSMUST00000087399 2 2 2 80 17 34847275 34847294 GATGAACCTGTATGGACTCC 59 34847337 34847664 GTCAGAGCTTCCTTCTCAG 59 NA Mus musculus 50 Rbm9 ENSMUSG00000033565 ENSMUST00000063150,ENSMUST00000096360 1 2 5 80 15 76924910 76928378 CTATCCAGGTGTGGTTTACC 59 76916554 76916572 GGCTGTGCATATCTGTAGG 59 NA Mus musculus 50 Mga ENSMUSG00000033943 ENSMUST00000110774,ENSMUST00000110773,ENSMUST00000046717 2 3 4 83 2 119757596 119757614 TCTTCTACTACGAAGGGCA 59 119757660 119758248 TTCTCGTATCACAGGATTGG 59 NA Mus musculus 50 Tmem16d ENSMUSG00000035189 ENSMUST00000070175 1 1 2 111 10 88579738 88587874 ATACAAGAAATGGCCAAGGA 59 88579646 88579664 AAGTGCTCGTCAGATTTCC 59 NA Mus musculus 50 Sbno2 ENSMUSG00000035673 ENSMUST00000042771 1 1 2 80 10 79521286 79521393 CTCTCCTACAAGGTACGAG 58 79521224 79521244 CTTGTACACGGTGAAATACTC 58 NA Mus musculus 50 Tmem161b ENSMUSG00000035762 ENSMUST00000057495,ENSMUST00000050885 2 2 2 192 13 84362039 84397386 GTTTGAGATGGTATCAACATCC 59 84399836 84411785 TAATGCAGTGCTAAAGTGTC 58 NA Mus musculus 50 Fbxw2 ENSMUSG00000035949 ENSMUST00000113081,ENSMUST00000113077 2 2 8 80 2 34678130 34678149 AGACCTCTTCGTTAATTGGA 58 34666628 34678087 CACTGAACACTGTACAGAG 57 NA Mus musculus 50 Trpm8 ENSMUSG00000036251 ENSMUST00000113114,ENSMUST00000040210 3 2 2 80 1 90276379 90276397 CAAGATCAACACGAAAGCC 59 90277569 90281248 AGGTCGTTAAGCTTTGAGTC 59 NA Mus musculus 50 Cdh8 ENSMUSG00000036510 ENSMUST00000109461 2 1 5 80 8 101554787 101554806 AACCCAGATGGAATTAATGG 57 101548845 101554744 CCTCTTTGGTAATCTTGGC 58 NA Mus musculus 50 Zscan12 ENSMUSG00000036721 ENSMUST00000053293,ENSMUST00000099720 2 2 2 133 13 21458505 21458523 CAGGTAACGTTTCAGGAGG 59 21458620 21460433 TCAACACCTGAAACTTGCT 59 NA Mus musculus 50 Unc84a ENSMUSG00000036817 ENSMUST00000110884 2 1 5 240 5 139706761 139706779 AGAACTTTCCAGAGTGGAC 58 139709946 139710484 AATATTTCGAAGGCACCTG 57 NA DesignRelaxed Mus musculus 50 Mrpl55 ENSMUSG00000036860 ENSMUST00000108786,ENSMUST00000108787,ENSMUST00000045697,ENSMUST00000108785,ENSMUST00000108784,ENSMUST00000116374 2 6 6 132 11 59018218 59018237 ACTATCCATATCCGATACCG 57 59019223 59019241 CTTCTTCCCTCTTCTGCTG 59 NA DesignNoJunction Mus musculus 50 AY078069 ENSMUSG00000036931 ENSMUST00000108176,ENSMUST00000108175,ENSMUST00000046177 2 3 3 99 7 31211201 31211219 CAAGGATGCAGAATTCCCA 59 31211281 31212103 TTGTTGCTCTTGATCTCCTG 59 NA Mus musculus 50 Rab11fip3 ENSMUSG00000037098 ENSMUST00000075024 2 1 2 153 17 26145830 26148954 TTGAGATGAATAGCCCAGC 59 26134967 26141503 AGGAAGATGACCTTGTCTG 58 NA Mus musculus 50 Hhat ENSMUSG00000037375 ENSMUST00000044190,ENSMUST00000097435,ENSMUST00000085565 1 3 4 90 1 194552538 194553487 GGAAGTTAAGAGAAGGTGGT 58 194552467 194552485 GAAGCTGGTGTAGTACAGG 59 NA Mus musculus 50 Rps6kc1 ENSMUSG00000037581 ENSMUST00000062296 2 1 4 81 1 192695821 192723338 CAGTGTTTGGATTCTCCAG 58 192695758 192695776 ATTCCATCATCTACCTCGG 58 NA Mus musculus 50 Armc3 ENSMUSG00000037683 ENSMUST00000049255 1 1 2 104 2 19218444 19218465 GCTATATTTGGATCTCCTACAG 57 19218530 19222108 TTTCCCTTTCCTTACTCCC 58 NA Mus musculus 50 Ppp1r16b ENSMUSG00000037754 ENSMUST00000052927,ENSMUST00000045503,ENSMUST00000103116 3 3 3 81 2 158581609 158582659 GATGAGATGCCAATAGACCT 58 158582703 158582721 TGATCACATCATGCTTGTG 58 NA Mus musculus 50 3110057O12Rik ENSMUSG00000037818 ENSMUST00000060415 1 1 4 117 3 40698363 40714440 CCTGTTGAAGAACAGTCAG 57 40714520 40720621 CGATAAACTGGAATCTTGCA 58 NA Nonspecific Mus musculus 50 Inpp4b ENSMUSG00000037940 ENSMUST00000109853 3 1 4 80 8 84595722 84646508 ATTGCATGAGAAGAGAAGGA 58 84646549 84646569 GTAGCATGTTGAAAGCATACC 59 NA Mus musculus 50 Inpp4b ENSMUSG00000037940 ENSMUST00000109853,ENSMUST00000109852 3 2 4 192 8 84292047 84292065 AGATCTCAGTAATCCACCC 57 84294813 84368365 CTGGTTCGAATAGTATCATGAG 58 NA Mus musculus 50 Igsf9 ENSMUSG00000037995 ENSMUST00000075014 1 1 3 124 1 174424677 174425246 ATATGTGCTAGAGCCAAGC 59 174425334 174425352 ACACTGAACTGATACTGCG 59 NA InUTR Mus musculus 50 Rnf144b ENSMUSG00000038068 ENSMUST00000068891,ENSMUST00000110111 1 2 2 80 13 47302856 47302874 GTGTGAACAGTCTCTGGAC 59 47302917 47315879 ATATACTGTTTCAGGCAGGG 59 NA Mus musculus 50 Tmco3 ENSMUSG00000038497 ENSMUST00000045229 1 1 2 80 8 13318909 13319768 TGGTCATCATGAAGTTTGTG 58 13319811 13319829 CGATCCACTTGATGTACTG 57 NA Mus musculus 50 BC028528 ENSMUSG00000038543 ENSMUST00000090476 2 1 2 80 3 95692110 95692128 ATCCTGTAACCACGAAACC 59 95688979 95692066 TCTGATTTGGACTCTGTGG 58 NA Mus musculus 50 Akap12 ENSMUSG00000038587 ENSMUST00000045730,ENSMUST00000092717 3 2 2 87 10 5993392 6032694 TGTTGAAGATGTTGGACAG 57 5993323 5993341 TTCAACAACTGTGGAACTG 58 NA Mus musculus 50 Timeless ENSMUSG00000039994 ENSMUST00000105244,ENSMUST00000055539,ENSMUST00000105245,ENSMUST00000105241 2 4 8 95 10 127687156 127687348 CTTCTTGCATGCAGAATGG 59 127687407 127687425 CTTCACTTTCGTCCTCTGG 59 NA Mus musculus 50 Gpr34 ENSMUSG00000040229 ENSMUST00000041708,ENSMUST00000096492 1 2 2 190 X 13210638 13210657 TGGCCTGAATAGATTCAGTC 59 13216394 13216412 AAGTGCATTCCATGAGAGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Lyrm5 ENSMUSG00000040370 ENSMUST00000111725,ENSMUST00000039729,ENSMUST00000111724,ENSMUST00000111726,ENSMUST00000111723,ENSMUST00000111721,ENSMUST00000111719 2 7 7 136 6 145163762 145163780 CGAGGAGAAGTACTGACTC 58 145163959 145163977 TTGATCTTCTCTGGGTCCT 59 NA DesignNoJunction Mus musculus 50 Tex2 ENSMUSG00000040548 ENSMUST00000042780,ENSMUST00000103070 3 2 2 82 11 106428334 106428352 ACCACAAATCACTCAAAGC 58 106410220 106428291 CATCCATCCCTTTAGTATTTCG 58 NA Mus musculus 50 Hisppd1 ENSMUSG00000040648 ENSMUST00000112845 2 1 2 80 1 99617851 99620260 TTACTGCAAATGAGGAAGAG 57 99617790 99617808 CACCACTGGTATAATGCAG 57 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000111370,ENSMUST00000099723,ENSMUST00000077941,ENSMUST00000066473,ENSMUST00000099725 1 5 17 183 2 91000519 91002194 GCATCTGTTGAATTGTGGA 58 90998627 90998645 CAGAGTCTTGATCAGTCCT 57 NA Mus musculus 50 Erg ENSMUSG00000040732 ENSMUST00000113848,ENSMUST00000077773 1 2 4 105 16 95600721 95600739 TAATGCATGCCAGAAACAC 58 95591658 95598914 TCATAAGGTAAATCTGGCCT 58 NA Mus musculus 50 Sh3kbp1 ENSMUSG00000040990 ENSMUST00000073094,ENSMUST00000112456,ENSMUST00000080394,ENSMUST00000112451,ENSMUST00000112449 2 5 8 86 X 156266511 156303276 GACAATTGGGAAGAAGTTACC 58 156303323 156316063 TAATCCTTGGTCTTTGTCCT 58 NA Mus musculus 50 Htr2c ENSMUSG00000041380 ENSMUST00000112831 1 1 3 83 X 143604151 143604169 TGGATTTCACTAGATGTGC 57 143604216 143617538 TAAACGGTTCTTCTTTCGG 57 NA Mus musculus 50 Tmtc4 ENSMUSG00000041594 ENSMUST00000037726,ENSMUST00000088343,ENSMUST00000057683 2 3 3 80 14 123332624 123340539 CCTCAATGCTAAGGTTCAC 58 123332562 123332580 CGGTAATATTTGATGGCCG 58 NA Mus musculus 50 Ssh1 ENSMUSG00000042121 ENSMUST00000077689,ENSMUST00000112298 1 2 2 80 5 114407440 114407459 CCTCATTAAAGCCAAACTCC 58 114405842 114407397 AGCTCATTTCGGATTTCCT 58 NA Nonspecific Mus musculus 50 Itga1 ENSMUSG00000042284 ENSMUST00000061673,ENSMUST00000036276 1 2 2 80 13 115825529 115825550 ACTGGAGATGTCTATAAGTGTC 58 115821391 115825491 CGATGTGTTAACTGGTAAATCC 59 NA Mus musculus 50 Hps4 ENSMUSG00000042328 ENSMUST00000112359,ENSMUST00000035279,ENSMUST00000112360 3 3 3 81 5 112793570 112793588 TCTCATCTTACAGACCTGC 58 112793632 112795934 CTGGGAATTCACAATCAGTC 58 NA Mus musculus 50 Frmpd3 ENSMUSG00000042425 ENSMUST00000050767,ENSMUST00000044702 3 2 2 81 X 136923130 136925872 CTGTTAAGGATGTGATGGC 58 136925916 136925935 GTATACTCAAGCACAAGAGC 58 NA Mus musculus 50 NP_932144.2 ENSMUSG00000042831 ENSMUST00000060834 1 1 1 64 7 31097362 31097381 TAACCATGTCCTTGTGAACC 59 31097610 31097628 GTGGTCCATCTTCATGAGG 59 NA DesignNoJunction Mus musculus 50 Ccdc60 ENSMUSG00000043913 ENSMUST00000050178,ENSMUST00000086483,ENSMUST00000111995 2 3 3 60 5 116640086 116640104 GTTCTCAGATATCCACTGC 57 116630896 116630914 CTTTAGCTTCTCACAGTCG 57 NA DesignNoJunction Mus musculus 50 BC050099 ENSMUSG00000044903 ENSMUST00000051973,ENSMUST00000108481 3 2 2 131 7 19305142 19308089 CTTCAGGTGAACTCCTCTC 58 19308182 19308202 ATTATCTGGAAGACTGTGGAC 59 NA Mus musculus 50 Trrap ENSMUSG00000045482 ENSMUST00000094120 1 1 4 105 5 145600491 145601219 CTCATCATCTATTGTGACTGC 58 145601286 145601304 ATACTGGATGATGGCAGAG 58 NA Mus musculus 50 1810007E14Rik ENSMUSG00000046804 ENSMUST00000061360 2 1 2 78 2 118600416 118600434 AAGATGCATCCAGGTAAGC 59 118603489 118603507 GTGATGTCCCTCATGACAG 59 NA DesignNoJunction, InUTR Mus musculus 50 D030056L22Rik ENSMUSG00000047044 ENSMUST00000062753,ENSMUST00000055792 1 2 2 81 19 18791744 18791762 GTATTGGAGGAACCCTCTG 59 18791807 18791825 CTCAAGTGTCTCTGTCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc88b ENSMUSG00000047810 ENSMUST00000113440,ENSMUST00000080351 2 2 2 177 19 6924305 6924400 GAGCGAAATAATGCCACAC 59 6923694 6923713 CTTGCATCTCCATCATTGAC 58 NA Mus musculus 50 Tshz2 ENSMUSG00000047907 ENSMUST00000099062 2 1 4 156 2 169616477 169709019 GAACAGGAAACCCTGTCTC 59 169709139 169709157 CCGTTTCTAGTTCCTCGTC 59 NA InUTR Mus musculus 50 Pcdhb16 ENSMUSG00000047910 ENSMUST00000051442 1 1 1 60 18 37638098 37638117 ATTTCCTCTGAAGAATGCTC 57 37638139 37638158 CAGATACTTGTCAATACCGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Kcna1 ENSMUSG00000047976 ENSMUST00000055168 3 1 1 60 6 126592062 126592080 TCTCCTAACTTAGCCTCTG 57 126592020 126592039 ACTTGCTGATAGTAGAGGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Efcab4a ENSMUSG00000048200 ENSMUST00000053670 3 1 1 166 7 148651575 148651673 AAACCCAAAGAGATGTGGT 59 148652011 148652029 AATAGCTAGAGCCTTCCTG 58 NA Mus musculus 50 Adam26a ENSMUSG00000048516 ENSMUST00000049577 1 1 1 60 8 44654179 44654197 AGAACATGCCAAATTGCTG 59 44654137 44654158 GTTGTATCACATTCTCACACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ctxn1 ENSMUSG00000048644 ENSMUST00000053252 3 1 1 213 8 4258489 4258507 GTTGGTTCTGTTGATGGTG 58 4258294 4258313 CATCTAGGCATAACCCTGAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 C430004E15Rik ENSMUSG00000048707 ENSMUST00000114336,ENSMUST00000051033 3 2 2 61 2 25124530 25124548 CATTTGTAAGCAGTGTGGG 59 25124660 25124678 ATGCTTTGGAGTGTAGCTG 59 NA DesignNoJunction Mus musculus 50 Gpr137c ENSMUSG00000049092 ENSMUST00000050518 2 1 2 82 14 45866118 45866137 GTGCCATCTCTTTAGTTAGC 58 45866181 45897068 AGACATACCCTTTGATTCGA 58 NA Mus musculus 50 Aftph ENSMUSG00000049659 ENSMUST00000035350 3 1 2 86 11 20592581 20598324 CTTTAGATGGTGTGGATCCA 59 20592514 20592532 ATGCATCAGTCACTCTGAG 59 NA Mus musculus 50 Zfp161 ENSMUSG00000049672 ENSMUST00000112674,ENSMUST00000062369,ENSMUST00000112676 3 3 3 199 17 69734828 69736653 AGCCTGAATTGTTCATGGA 59 69736816 69736834 CTTAAAGTACGTGCTGCAG 58 NA DesignNoJunction, InUTR Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000111841 3 1 14 109 2 76692452 76692473 CTAAGAAAGTGGAAGTTGAACC 59 76685855 76692214 CACTTCCGGGACTTTAGTG 59 NA Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000099981,ENSMUST00000011934,ENSMUST00000111882,ENSMUST00000111865,ENSMUST00000099980 1 5 14 80 2 76780955 76780973 GATGCTGGGAATTACTCCT 58 76780486 76780914 CACATCAACACTATAGACAGAG 58 NA Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000111843 2 1 14 188 2 76669917 76685448 AAAGTGCCTGAAGTACCAC 59 76655904 76656795 GGGTTTCTTTCTTAGAACGC 59 NA Mus musculus 50 Zfp664 ENSMUSG00000051911 ENSMUST00000063487 3 1 1 195 5 125365082 125365101 ACAAATCCAAGCTACTTCTC 57 125381748 125381766 CTCTTGAAGAGGACCTTCC 58 NA DesignNoJunction Mus musculus 50 Magi3 ENSMUSG00000052539 ENSMUST00000098772 2 1 2 82 3 103820557 103820579 CTGAGCAACATGCTTTCAG 59 103819960 103819984 GGAAGATGAAGGACTATTAGTATCC 59 NA Mus musculus 50 Ddef2 ENSMUSG00000052632 ENSMUST00000064595 3 1 3 82 12 21262456 21263875 GAGTGACATCTACCAATCCC 59 21263919 21263938 CTGGTTCATGGCTTCTAGAG 59 NA Mus musculus 50 H2-T24 ENSMUSG00000053835 ENSMUST00000116595,ENSMUST00000066488,ENSMUST00000113760 1 3 3 60 17 36152335 36152353 GGAGGAAAGAACTTTACCC 57 36151985 36152005 GTTTGAACTGATGAGTCACTG 59 NA DesignNoJunction Mus musculus 50 EG634650 ENSMUSG00000054588 ENSMUST00000100961,ENSMUST00000065588 2 2 2 60 5 105650949 105650967 TATGCCAAGATCAAGACCC 59 105650114 105650927 GAATCCCTAGTTTATTCCCAG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 MGI:98976 ENSMUSG00000054626 ENSMUST00000067782,ENSMUST00000114814,ENSMUST00000114810,ENSMUST00000067763 3 4 4 135 X 51098672 51098960 GGAGATACACGATCTCCAG 58 51091088 51091107 GTTCTAATTTCACGTTGCTG 57 NA Mus musculus 50 Abca15 ENSMUSG00000054746 ENSMUST00000076272,ENSMUST00000098078 1 2 2 83 7 127483754 127484066 CGATTAAAGGAATACCAGCTC 58 127484111 127484129 ATACAGACAGAGGAAGGTG 57 NA Mus musculus 50 Klhl5 ENSMUSG00000054920 ENSMUST00000101192,ENSMUST00000031089,ENSMUST00000101191,ENSMUST00000031085 3 4 4 118 5 65535889 65535907 GTTCTTGATGAAGCAGCTC 58 65535989 65539840 CCATGAAATGTTCCATCGT 58 NA Mus musculus 50 Cgrrf1 ENSMUSG00000055128 ENSMUST00000068532 1 1 1 67 14 47473126 47473144 TTAATCCTGGCTCAAGGTC 58 47473385 47473405 GGAGGACTATTATTTGCAGAC 58 NA DesignNoJunction Mus musculus 50 Setd3 ENSMUSG00000056770 ENSMUST00000071095,ENSMUST00000085012,ENSMUST00000099383,ENSMUST00000109879 3 4 4 85 12 109403331 109403349 TCAGAAATCAGGTACTGGG 58 109401267 109403282 TGCTACATTTCTGCAACAG 58 NA Nonspecific Mus musculus 50 Lgals8 ENSMUSG00000057554 ENSMUST00000064217,ENSMUST00000099821,ENSMUST00000099820 2 3 3 80 13 12548659 12548678 ATTACTGAGCAATTGAAGCC 58 12547200 12548617 GTCAACCTGGAATCTTTCTG 58 NA Mus musculus 50 Fgf18 ENSMUSG00000057967 ENSMUST00000109363,ENSMUST00000020507 3 2 2 114 11 33024694 33024713 TCCTAGTGGAGACAGATACC 59 33018018 33024617 CTAGTACCATCAGGCTTCC 58 NA InUTR Mus musculus 50 2210010B09Rik ENSMUSG00000058192 ENSMUST00000115557,ENSMUST00000060063 2 2 2 82 9 20393013 20393031 GATCAAGCTCACAGAGACC 59 20393077 20395272 TTGATGACCTCACATCCTG 58 NA Mus musculus 50 Kcnh7 ENSMUSG00000059742 ENSMUST00000075052 3 1 3 80 2 62625697 62625715 TGGTTCCTGATTGACATGG 59 62615727 62625654 TAGTGTCGTTGTCTCATCAG 59 NA Mus musculus 50 Irak2 ENSMUSG00000060477 ENSMUST00000059286,ENSMUST00000089023 1 2 4 121 6 113615823 113620193 GTTCCCTTCTAGACACAGG 58 113620277 113622741 ACTGCAATACTTAGACTGGG 59 NA Mus musculus 50 Mfap2 ENSMUSG00000060572 ENSMUST00000102492,ENSMUST00000071977 2 2 2 104 4 140569707 140569726 ATATGACCTGGATCCTCTCC 59 140569988 140570113 GGACTCACTTCTTGGTAGTC 59 NA Mus musculus 50 Rrp1 ENSMUSG00000061032 ENSMUST00000062678,ENSMUST00000092345,ENSMUST00000105386 3 3 3 83 10 77865443 77866258 GTCCTCCAGTTTGACTACG 59 77865378 77865396 CTTCCTGTTCTGAGAAGGG 59 NA Mus musculus 50 4930534B04Rik ENSMUSG00000061533 ENSMUST00000021341 3 1 3 105 12 92247367 92257741 GAGCTTTAGGGATGACAGG 59 92247280 92247298 AAACTGTGGACTAGACAGG 58 NA Mus musculus 50 Flot2 ENSMUSG00000061981 ENSMUST00000100786 2 1 4 87 11 77866776 77868295 TGCTTATCTGGATTTCCCT 57 77868346 77868364 GTCACAGTTAAAGCTACCC 57 NA Mus musculus 50 Tgif2 ENSMUSG00000062175 ENSMUST00000073352,ENSMUST00000081335,ENSMUST00000109564 2 3 3 60 2 156670067 156670085 GAGCAGGAGAAGCTAAGTC 59 156670108 156678874 AGTTACATATCTGCAGCACC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Kdr ENSMUSG00000062960 ENSMUST00000113516,ENSMUST00000076072 1 2 2 80 5 76348965 76352190 TCATAATAGAAGGTGCCCA 57 76348903 76348921 AGAAGAACATGGCAATCAC 58 NA Mus musculus 50 Zfp192 ENSMUSG00000063894 ENSMUST00000045228 2 1 3 118 13 21614182 21617022 GATTTCACTTACAACGCCA 58 21613768 21614100 CTTTCCAAAGTCTGGAACC 58 NA Mus musculus 50 OTTMUSG00000010009 ENSMUSG00000066031 ENSMUST00000085144,ENSMUST00000084194,ENSMUST00000105770 2 3 3 60 4 143382870 143382891 CCTTGAGGGACTAGATATACTG 58 143382912 143383447 TCTGAGTTTGCACCTACTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 MGI:2682933 ENSMUSG00000066113 ENSMUST00000107178,ENSMUST00000107177,ENSMUST00000084438 1 3 4 80 4 86059689 86061381 CTTTGGTGATCCAAGATTACTG 59 86061420 86061440 GATGAATGCCTCTATTACCAC 58 NA Mus musculus 50 4930519N13Rik ENSMUSG00000068115 ENSMUST00000109896,ENSMUST00000099238 1 2 5 80 2 150775127 150775145 AAGATCAAACTTCTGCAGC 58 150770915 150775083 TAACTCAGCCCTGTAACTC 58 NA Mus musculus 50 Actc1 ENSMUSG00000068614 ENSMUST00000090269,ENSMUST00000116448 3 2 2 186 2 113873334 113873868 GAAGATCAAGATTATTGCTCCC 58 113873169 113873192 CCTGAATATAAGGTAGGCTAAGAG 59 NA InUTR Mus musculus 50 Gm128 ENSMUSG00000068860 ENSMUST00000090815 2 1 1 61 3 95044258 95044276 GTAGTACTGATGCCTTGGG 59 95044215 95044233 CTCCTACTCATAGTGCCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 LOC545547 ENSMUSG00000068887 ENSMUST00000107304 1 1 1 223 3 92593124 92593142 CACAGACACCACAGATCTC 59 92592919 92592937 TTCTGAACGTGTTCTCCTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Syt11 ENSMUSG00000068923 ENSMUST00000107505,ENSMUST00000090945 1 2 2 82 3 88552818 88565659 AGGAACATTCAGAAGTGCA 59 88552754 88552772 ACCACTGTCATTCTCTGTG 59 NA Mus musculus 50 Ahnak ENSMUSG00000069833 ENSMUST00000092955,ENSMUST00000079602,ENSMUST00000043246 3 3 5 81 19 9075340 9111653 CTGAAGTGGTTCTGAACAC 58 9111698 9111716 GCTTTGTTGATAGCTTCCT 57 NA Mus musculus 50 Gm1673 ENSMUSG00000070858 ENSMUST00000114384,ENSMUST00000114383,ENSMUST00000094869,ENSMUST00000114382 3 4 4 139 5 34326724 34326742 GCATTTGAATTCATGCAGC 58 34327602 34327620 AAAGATCTTCAGCGTCCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Zadh1 ENSMUSG00000072946 ENSMUST00000101216 1 1 2 86 12 85649352 85649373 GAGTCAGTGGTTTAAAGAAGGA 59 85651906 85654902 ATGGACTGGAATGCAACTC 59 NA Mus musculus 50 Park2 ENSMUSG00000073465 ENSMUST00000097413 1 1 1 127 17 11132949 11132967 ATACTGTATCTAGGCCCAG 57 11133734 11133754 GCACCAGTGAAGAATTATACC 58 NA DesignNoJunction Mus musculus 50 Spint2 ENSMUSG00000074227 ENSMUST00000098604 3 1 3 96 7 30048677 30048696 ATTTGTTTATGGAGGCTGTG 58 30045436 30048618 ATCAGTGGTGTTCTCAGTG 59 NA Mus musculus 50 EG229571 ENSMUSG00000074432 ENSMUST00000098885 1 1 1 60 3 92878109 92878127 GTGAGACTAACAAACCGTG 58 92878150 92878169 TCATCTCTTTGAAGACTTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1196 ENSMUSG00000075120 ENSMUST00000099817,ENSMUST00000104892 3 2 2 60 2 88541394 88541412 TTCTTTCTCTTGTTCCTGC 57 88541352 88541370 ATAGGATGACAGAGTTCCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Klhl17 ENSMUSG00000078484 ENSMUST00000105569,ENSMUST00000105568 1 2 2 96 4 155605259 155605277 AACGATATGACCCACTGAC 59 155605071 155605199 TACAGGTTCCCATCAAGTG 58 NA InUTR Mus musculus 50 NM_001085412.1 ENSMUSG00000078512 ENSMUST00000105767,ENSMUST00000081645 3 2 2 129 4 143486725 143486746 AAGGAAGCCCTTATTCTTACAG 59 143485798 143486635 GACTCTCAAAGCACCTGAG 59 NA Mus musculus 50 Smarcd2 ENSMUSG00000078619 ENSMUST00000106843,ENSMUST00000021052 2 2 3 94 11 106127033 106127051 GAAACAGATGGCTTTCAGG 58 106126642 106126976 AGTTTATACTGAGGAGGCTG 58 NA Mus musculus 50 Aoc2 ENSMUSG00000078651 ENSMUST00000041095,ENSMUST00000107264 3 2 2 137 11 101190244 101190262 CAATGAAACCCTCTTAGGG 57 101190608 101190626 AAGAAATTGTAGGGTCGGA 58 NA DesignNoJunction Mus musculus 50 0610010B08Rik ENSMUSG00000078888 ENSMUST00000109016,ENSMUST00000109015 1 2 3 95 2 175747797 175747818 GACCTATAAGAATCTCACAGCT 59 175748079 175749254 CTTTCATGCCTTCCATGAC 58 NA Nonspecific Mus musculus 50 A2BE20_MOUSE ENSMUSG00000078896 ENSMUST00000109044 1 1 3 93 2 175303603 175303622 CCTATAGGAATCTCACAGCT 57 175303884 175307855 ATGTCAGGACTTCCAAGAC 58 NA Nonspecific Mus musculus 50 Mpa2l ENSMUSG00000079362 ENSMUST00000100960,ENSMUST00000050011 1 2 2 137 5 105706821 105706842 CTTGATTCTATCACAGAAGACC 58 105705916 105706724 AATCCCTAGTCTATTCCCAG 57 NA Mus musculus 50 A2ASX7_MOUSE ENSMUSG00000079602 ENSMUST00000114915 1 1 1 60 2 9805420 9805440 CTCTTCTCTGTATTTCAGCTC 57 9805380 9805398 TAGCTTTCACCATGTCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 9530020O07Rik ENSMUSG00000056344 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-301a ENSMUSG00000065589 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 TRBJ1-5 ENSMUSG00000076487 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-466c ENSMUSG00000076979 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Gcg ENSMUSG00000000394 ENSMUST00000102733 1 1 1 85 2 62314934 62314952 GAGTTCTTACTTGGAGGGC 59 62313903 62314885 CTTCTTCTGGGAAGTCTCG 59 NA Mus musculus 50 Oprm1 ENSMUSG00000000766 ENSMUST00000092731 3 1 21 61 10 3506724 3516056 AACTAACCACCAGACAAGC 59 3506681 3506702 TGCTCACCGATTTAATCTACTC 59 NA DesignRelaxed, InUTR Mus musculus 50 Il12rb1 ENSMUSG00000000791 ENSMUST00000000808,ENSMUST00000093452 3 2 2 93 8 73335120 73336383 TGTACAACTGGACCAAGAC 59 73336439 73336458 TCTTCAGACACATTCCAGTC 59 NA Mus musculus 50 Kcnn3 ENSMUSG00000000794 ENSMUST00000000811 3 1 1 82 3 89368810 89368830 CCTTATCAGTTTATCCACCGT 59 89368874 89413255 TGTCGATCACAAAGAGCTG 59 NA Mus musculus 50 Dnajc5 ENSMUSG00000000826 ENSMUST00000072334,ENSMUST00000108798,ENSMUST00000116365,ENSMUST00000108797,ENSMUST00000108796 3 5 5 82 2 181281182 181282051 AAAGTCCTATCGGAAGCTG 59 181282095 181282115 TCTCCTTAAACTTGTCTGCAG 59 NA Mus musculus 50 Ocrl ENSMUSG00000001173 ENSMUST00000115020,ENSMUST00000001202,ENSMUST00000115015 2 3 4 80 X 45300985 45301004 TAATGACAGCCAATACTGCA 59 45301046 45301317 ATGTCTAAGGTCTCGTTTGG 59 NA Mus musculus 50 D0HXS9928E ENSMUSG00000001962 ENSMUST00000002027,ENSMUST00000114160 1 2 2 83 X 71563533 71563718 CACAGTTAAGATGAAGAAAGGC 59 71563761 71563780 AGTTCACTGAAGTCTTTCCG 59 NA Mus musculus 50 Tead3 ENSMUSG00000002249 ENSMUST00000019363,ENSMUST00000114799,ENSMUST00000080572 2 3 3 96 17 28471973 28472440 CTATGAACCTGGACCAAGTC 59 28471896 28471914 TTGTTCTGTAGAACGCTGG 59 NA Mus musculus 50 Abhd3 ENSMUSG00000002475 ENSMUST00000002549 1 1 1 80 18 10647772 10647790 CTGAAGTCAGTGGGAATCC 59 10645220 10647729 TTCTATTGGGATAGCATGGC 59 NA Mus musculus 50 Rpl3l ENSMUSG00000002500 ENSMUST00000045186 2 1 1 85 17 24872449 24872676 CTGAGAAAGTCCCTTCTGG 59 24872724 24872743 CCAAACTTAGAAGTGGTGTC 58 NA Mus musculus 50 Ddx56 ENSMUSG00000004393 ENSMUST00000004507 2 1 1 82 11 6166402 6166525 AGTCTTCTCTGTCACTTGC 59 6166338 6166358 TCCTTCAGAGTTTGTACATCC 59 NA Mus musculus 50 Ctse ENSMUSG00000004552 ENSMUST00000073350,ENSMUST00000116536 3 2 2 81 1 133568915 133569032 ATGGAGAATATGCAGTGGA 58 133569077 133569095 AGGGTATATGAAACCTCGT 57 NA Mus musculus 50 Fgfr4 ENSMUSG00000005320 ENSMUST00000005452,ENSMUST00000067171 1 2 3 80 13 55263092 55267257 AAGATGCTGAAAGACAATGC 59 55267298 55267318 TCTTCCGATTAGCTTCATCAC 59 NA Mus musculus 50 Krt23 ENSMUSG00000006777 ENSMUST00000006969 1 1 1 81 11 99339600 99341370 TCAAGGCTGAAAGGATCTG 59 99339537 99339558 CTTGAGAAAGAACGATTCTTCC 59 NA Mus musculus 50 Homer1 ENSMUSG00000007617 ENSMUST00000080127,ENSMUST00000109498,ENSMUST00000109497,ENSMUST00000060490,ENSMUST00000079086,ENSMUST00000109490 2 6 10 191 13 94157481 94157499 CAGCAATCAGCAAACACTG 59 94161662 94161682 CGTTTGCTTGACTACTAACAC 59 NA DesignNoJunction Mus musculus 50 Pou2f2 ENSMUSG00000008496 ENSMUST00000108415,ENSMUST00000098679,ENSMUST00000108418,ENSMUST00000085970,ENSMUST00000108417,ENSMUST00000108416,ENSMUST00000108414,ENSMUST00000108413 3 8 8 125 7 25882507 25882525 TCTATGGCAACGACTTCAG 59 25882298 25882418 CAGACATAGTCTCTGCGTC 59 NA Mus musculus 50 Zfp422-rs1 ENSMUSG00000008686 ENSMUST00000008830 1 1 1 80 17 33379887 33380669 GAGAAACTCGAGAATTCAGGT 59 33379827 33379846 ATCTGTTGGTGAGTCTTTCC 59 NA Mus musculus 50 Acyp1 ENSMUSG00000008822 ENSMUST00000065913 3 1 2 98 12 86620941 86620959 TTTCCGCAAGTACACTCAG 59 86620010 86620028 ATGCATACATGGGTATGCA 59 NA DesignNoJunction Mus musculus 50 Tor2a ENSMUSG00000009563 ENSMUST00000009707 2 1 1 82 2 32615213 32616118 TCTTTATCAGCAATGCTGGT 59 32616163 32616181 GATTTCTTCCCTGTCCCTG 59 NA Mus musculus 50 Slamf6 ENSMUSG00000015314 ENSMUST00000042184,ENSMUST00000015458 3 2 2 89 1 173864494 173864512 ACACAGGATCATACACTGC 59 173864565 173866611 TACCCAGTCGTTCAAAGAC 59 NA Mus musculus 50 Pacsin2 ENSMUSG00000016664 ENSMUST00000056177 2 1 1 80 15 83217261 83218956 GACGTTCTAAAGACCAAGG 57 83217199 83217217 CATGTTCTCCATGTACTGG 57 NA Mus musculus 50 Ccdc56 ENSMUSG00000017188 ENSMUST00000017332 3 1 1 82 11 101139762 101140044 CCTGGTGTTAGCTATTTATGGT 59 101139701 101139719 CTTTGGCTTCATCTTCCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Serinc3 ENSMUSG00000017707 ENSMUST00000017851,ENSMUST00000099107 3 2 2 80 2 163452201 163453615 TATTCTAGCTTCCGTACTTCG 59 163452141 163452161 ATCACCAAGGATAACACTGTC 59 NA Mus musculus 50 Rars ENSMUSG00000018848 ENSMUST00000018992 1 1 1 80 11 35638010 35639499 GATGTGCTAAGGTTAAACCA 57 35637949 35637968 CGGAAATTTATCTTGCAGGT 58 NA Mus musculus 50 Sirt1 ENSMUSG00000020063 ENSMUST00000020257,ENSMUST00000105442 1 2 2 80 10 62784550 62784568 CAGTTGCAGAAACAGTGAG 58 62783704 62784506 ATTGATTACCCTCAAGCCG 59 NA Mus musculus 50 Lgr5 ENSMUSG00000020140 ENSMUST00000020350,ENSMUST00000105272 3 2 2 80 10 114907684 114909035 ACCTTAAGGAACTAGGATTCC 58 114907624 114907642 TGATAAGAGAAGGGTTGCC 58 NA Mus musculus 50 Dock2 ENSMUSG00000020143 ENSMUST00000093193,ENSMUST00000101365,ENSMUST00000101364,ENSMUST00000109320 2 4 4 80 11 34528019 34532360 GTCATCAGTGAGAACTATCTG 57 34527959 34527978 TACCTTCAGGTTATTGAGCA 58 NA Mus musculus 50 Phf15 ENSMUSG00000020387 ENSMUST00000109090,ENSMUST00000020655,ENSMUST00000074967,ENSMUST00000109091 1 4 4 200 11 51644124 51644767 CTCAAGGAGATGGAGAAGC 59 51643942 51643960 GTCACAGAAGACCATCTCG 59 NA Mus musculus 50 Guk1 ENSMUSG00000020444 ENSMUST00000102702 3 1 2 80 11 58997983 58998001 CCTGGTGATCATCAATGAC 57 58997673 58997940 TGTGCTTTCTTGATTTCCTC 58 NA Mus musculus 50 Rnf185 ENSMUSG00000020448 ENSMUST00000064364,ENSMUST00000077078,ENSMUST00000110026 3 3 3 204 11 3326671 3328894 TACATCAGTGGTTGGAGAC 58 3319954 3319973 CCATCTCCAAATCCAAATCC 58 NA DesignRelaxed Mus musculus 50 Trim11 ENSMUSG00000020455 ENSMUST00000108810 3 1 3 183 11 58801174 58802238 ATAGCCAAGGACATTAAGGAC 59 58803721 58803739 CAGATAAGACCAGCTCAGG 59 NA Mus musculus 50 OTTMUSG00000001265 ENSMUSG00000020486 ENSMUST00000107961 1 1 9 160 11 87392482 87392500 TGATGACAGAATGACCCAC 59 87397516 87397918 TACCCAGACCAGATTCTCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Tom1l1 ENSMUSG00000020541 ENSMUST00000020849,ENSMUST00000107869,ENSMUST00000107867,ENSMUST00000107868 3 4 4 83 11 90517758 90519039 TTTCAGGCCTAAGTGTCAG 59 90517693 90517712 CTAGTAAATCCCTCTGTGGC 59 NA Mus musculus 50 Slc7a15 ENSMUSG00000020600 ENSMUST00000036938,ENSMUST00000095863 3 2 3 116 12 8541276 8541294 GATTCACGTGAATCGACTG 58 8537080 8541196 GACAGGAAGCTTAAGAGGT 58 NA Mus musculus 50 Tmem132e ENSMUSG00000020701 ENSMUST00000092852 2 1 1 61 11 82250946 82250964 CTGACAGTCATCCAAAGGG 59 82250989 82251756 ATGATCTCTGTGTCCATGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Slc9a3r1 ENSMUSG00000020733 ENSMUST00000021077 3 1 1 110 11 115037816 115038545 GAATTGTGGAGGTCAATGG 58 115038619 115038637 TTTCCTTGTCTACCACCAG 58 NA Mus musculus 50 2310067B10Rik ENSMUSG00000020747 ENSMUST00000093912,ENSMUST00000103033 2 2 3 99 11 115649690 115649982 GATTGACAACATCAGATGGTG 59 115650043 115650061 ATAGTGAAGCATCACCGAC 59 NA Mus musculus 50 Mxra7 ENSMUSG00000020814 ENSMUST00000047715,ENSMUST00000106374 1 2 3 157 11 116677538 116689043 GGATGAAGACTCAGACAGTG 59 116672177 116673250 CAATCCTGTGTTCCTCCTC 59 NA DesignNoJunction Mus musculus 50 Coro6 ENSMUSG00000020836 ENSMUST00000102493,ENSMUST00000108390,ENSMUST00000021190,ENSMUST00000052515,ENSMUST00000108391 3 5 6 299 11 77279935 77279953 TCATCATCTGGAATGTGGG 59 77280840 77281780 CTTCGAAATTGTTCGGGTC 59 NA DesignRelaxed Mus musculus 50 Ap4s1 ENSMUSG00000020955 ENSMUST00000021338 1 1 1 80 12 52818069 52818088 GACATTAATAAACGTGCGCT 59 52818130 52821634 AATGAATGAGCATTGTTCGC 59 NA Mus musculus 50 Plek2 ENSMUSG00000021118 ENSMUST00000021544 3 1 1 80 12 79990966 79993123 CTTCCAAAGAAGAGAACAGG 58 79990905 79990923 GAACACCATTATCCTCCAG 57 NA Mus musculus 50 Erh ENSMUSG00000021131 ENSMUST00000021559 3 1 1 80 12 81738522 81738542 CATCACATACGATATCAGCCA 59 81735500 81738480 GTATCAGCTCGGTAAACCA 59 NA Nonspecific Mus musculus 50 Dek ENSMUSG00000021377 ENSMUST00000021807 1 1 1 81 13 47193703 47194720 TTCTGGCAAACCATTACCA 59 47193640 47193658 CCTTGTTGTTCCAGAACTG 58 NA Mus musculus 50 Slc34a1 ENSMUSG00000021490 ENSMUST00000057167,ENSMUST00000116411 2 2 2 81 13 55513662 55513680 ATTGGCACTACCACTACAG 58 55513724 55514504 AGAGGGCAATCTGAAATGAG 59 NA Mus musculus 50 2210016F16Rik ENSMUSG00000021550 ENSMUST00000022032 1 1 1 113 13 58483366 58483782 GAAGCTCCTCAAAGGAGAG 59 58483271 58483289 TCAAGAAGCTCCAGAAGAC 58 NA Mus musculus 50 Mctp1 ENSMUSG00000021596 ENSMUST00000109583,ENSMUST00000109591,ENSMUST00000109589,ENSMUST00000022086,ENSMUST00000046098 3 5 5 96 13 76851408 76862934 TGGAGTTAAACAGGTCCAC 59 76862994 76863012 GTAAGGATGACTGACAGCA 58 NA Nonspecific Mus musculus 50 Gtf2h2 ENSMUSG00000021639 ENSMUST00000109351,ENSMUST00000066984,ENSMUST00000066940 1 3 3 85 13 101258811 101258829 CCAATAGACTGACTTGCAC 58 101256072 101256441 TATTCCAATCTGACTGATAGGG 58 NA Mus musculus 50 Crhbp ENSMUSG00000021680 ENSMUST00000045583 2 1 1 85 13 96212222 96213699 TCCTGAAGGTATTTGATGGT 58 96212156 96212174 GTACCTCTTCATAGTGGGC 59 NA Mus musculus 50 Htr1a ENSMUSG00000021721 ENSMUST00000022235 3 1 1 60 13 106235435 106235453 CTACCTTTCTGTGAGAGCA 58 106235477 106235495 GCCAGTTAATTATGGCACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rnase10 ENSMUSG00000021872 ENSMUST00000022424 1 1 1 60 14 51627729 51628948 AAGCTGCTTACAAGTGTAGG 59 51628970 51628989 ACATCATGAACAACAGATGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tkt ENSMUSG00000021957 ENSMUST00000022529 3 1 1 81 14 31380239 31381360 GATCACAGGGATTGAAGAC 57 31381404 31381423 AATCTCCTGGATAATCTGCT 57 NA Mus musculus 50 Zc3h13 ENSMUSG00000022000 ENSMUST00000022577,ENSMUST00000100381 1 2 2 110 14 75727850 75727868 AGATAAAGACAAGGGACGC 59 75727942 75729489 TAGCGTTTCTTGGACTTCC 59 NA Mus musculus 50 Spry2 ENSMUSG00000022114 ENSMUST00000022709 3 1 1 60 14 106292321 106292340 CAGAACGTCATTGACTATGG 58 106292280 106292298 AGCAGTGATAGAAGAGACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Acin1 ENSMUSG00000022185 ENSMUST00000022793,ENSMUST00000111485,ENSMUST00000022794,ENSMUST00000111484 1 4 5 81 14 55263567 55263585 GTACAGGAACTTTGGTGGA 59 55263376 55263524 TCCTCTACTGTAGAGTACGTC 59 NA Mus musculus 50 Sub1 ENSMUSG00000022205 ENSMUST00000022816,ENSMUST00000110504 1 2 2 184 15 11916314 11920726 CAACATGTTCCAGATTGGA 57 11913990 11914011 CGTCATCTATATCAGAGATCTG 57 NA Mus musculus 50 Adamts20 ENSMUSG00000022449 ENSMUST00000035342,ENSMUST00000109250 3 2 2 80 15 94210204 94210222 CGATGCTAAGATGGTTCAC 58 94193020 94210160 TAGATTGCAGCAACAATCG 58 NA Mus musculus 50 Rapgef3 ENSMUSG00000022469 ENSMUST00000023109 3 1 1 87 15 97576090 97577499 GATCTCCACGTGTTCTGAG 59 97576021 97576039 GTTGTCAATGACCTTCAGC 59 NA Mus musculus 50 Ly6c1 ENSMUSG00000022584 ENSMUST00000100542 3 1 1 195 15 74942072 74942090 GTACTCACGCTACAAAGTC 57 74939166 74940943 TTCCTTCTTTGAGAGTCCT 57 NA Mus musculus 50 Thap7 ENSMUSG00000022760 ENSMUST00000100125,ENSMUST00000023443 1 2 2 162 16 17530458 17530476 TTCCCAAGAAAGACAACCC 59 17529160 17530332 TGATACCCACTGATTCCCA 59 NA Mus musculus 50 Ildr1 ENSMUSG00000022900 ENSMUST00000089618,ENSMUST00000023617 2 2 2 159 16 36708495 36709571 ACTTCTCTGCCTCATACCA 59 36709694 36709712 TTCTGGATGGTGATCTTGC 59 NA Mus musculus 50 Pcdhgc5 ENSMUSG00000023036 ENSMUST00000055935 2 1 9 298 18 37981599 37981617 AAAGTACATGGAGGTGACC 58 37992950 37992968 TATCAAACTGGTTGTTGGG 57 NA DesignNoJunction Mus musculus 50 Ela3 ENSMUSG00000023433 ENSMUST00000102522 3 1 1 126 4 136981036 136984384 GGTCTCCCTTCAGTATGAG 58 136980808 136980826 AAGTACAACCTGGTAGGTG 58 NA DesignNoJunction Mus musculus 50 Tiam2 ENSMUSG00000023800 ENSMUST00000072156 1 1 1 80 17 3503049 3505715 TCTTACGTGAAGGATCTGAG 58 3505757 3505776 CTCATCTTGGGTAAGAAAGG 57 NA Mus musculus 50 Cfb ENSMUSG00000024371 ENSMUST00000025229 2 1 1 81 17 34996229 34996247 ACTGTCATTCAGGACATCC 58 34996083 34996186 CATACACATCCAGGTAATCCT 58 NA Mus musculus 50 Aqp4 ENSMUSG00000024411 ENSMUST00000079081,ENSMUST00000115856 1 2 2 82 18 15556643 15556664 CTGATGTTACTGGTTCAATAGC 59 15556151 15556602 GGCTCCAGTATAATTGATTGC 59 NA Mus musculus 50 Psmg2 ENSMUSG00000024537 ENSMUST00000025418 2 1 1 83 18 67804066 67804085 CAATGGTTGGAAACAATCCA 58 67804129 67805661 ACGGTAAGGAATACACTTCAG 59 NA Mus musculus 50 Zfand5 ENSMUSG00000024750 ENSMUST00000025659 1 1 1 66 19 21354223 21354913 AGAAAGTTGGCCTTACAGG 59 21354943 21354961 GAGTAACGGTGAAGTCCAC 59 NA DesignNoJunction Mus musculus 50 Stip1 ENSMUSG00000024966 ENSMUST00000025918 1 1 1 80 19 7103490 7103614 CATAACTAATCAAGCAGCTGTG 59 7103431 7103449 ACTTCAATGGCCTTCTCAC 59 NA Mus musculus 50 Ints4 ENSMUSG00000025133 ENSMUST00000026126 1 1 1 80 7 104667647 104667668 TGAAAGGGTGTATAGTGTTCAG 59 104667708 104675150 CTTTGCAGATCTCTGATGGT 59 NA Mus musculus 50 Csnk1d ENSMUSG00000025162 ENSMUST00000096557,ENSMUST00000018274,ENSMUST00000070575,ENSMUST00000106124 1 4 4 80 11 120833737 120833756 AGTATGAGAGGATCAGTGAG 57 120833015 120833694 ATGTGGCAAATTCAGAAGG 58 NA Mus musculus 50 Ndufb8 ENSMUSG00000025204 ENSMUST00000026222 3 1 1 168 19 44629454 44629472 AGTATAACATGCGAGTGGA 58 44627327 44628160 TCTAGGTCCCAGTGTATCG 59 NA DesignNoJunction Mus musculus 50 Mbc2 ENSMUSG00000025366 ENSMUST00000026427,ENSMUST00000105234 1 2 2 80 10 127959349 127959367 CATTGGCGTCAAAGTTCAC 59 127959166 127959307 TGTACATCACCTACATAGCTG 59 NA Mus musculus 50 Rhot2 ENSMUSG00000025733 ENSMUST00000043897,ENSMUST00000115063,ENSMUST00000026830 3 3 3 92 17 25977048 25977215 GGAGAAGTACCTGATTCTGTG 59 25976976 25976994 TCAAACATTAAGCAGGCGA 59 NA Mus musculus 50 Cflar ENSMUSG00000026031 ENSMUST00000114313,ENSMUST00000114309,ENSMUST00000069333 3 3 3 80 1 58785934 58785952 CAGAACGATGTATCCTCCT 58 58785995 58788004 CAAGAAACTCTTGTCCTTGG 58 NA Nonspecific Mus musculus 50 Dst ENSMUSG00000026131 ENSMUST00000088270,ENSMUST00000097785,ENSMUST00000097786,ENSMUST00000097789,ENSMUST00000115104,ENSMUST00000088216,ENSMUST00000115102 3 7 8 192 1 34213664 34213683 TTATCATCCGAACGACATCG 59 34217548 34217857 TTTGGAATCAGACTGGAGAG 59 NA Mus musculus 50 Tm4sf20 ENSMUSG00000026149 ENSMUST00000027331 1 1 1 100 1 82764813 82764832 GAATTATAGGAGCAGGTCTG 57 82756883 82760508 TGAAAGAAACATCCCAGTC 57 NA Mus musculus 50 Smap1 ENSMUSG00000026155 ENSMUST00000027339 2 1 1 81 1 23860381 23865871 CTAGGACTTGATGGTCCTG 58 23860318 23860336 TGTCCAGATCATCACTCAG 58 NA Mus musculus 50 Atg4b ENSMUSG00000026280 ENSMUST00000027502 3 1 1 87 1 95674864 95674882 AACTTGCTGTATTCGACAC 58 95674931 95677304 CATAACCTTCTGATTTCCTCC 58 NA Mus musculus 50 Cln8 ENSMUSG00000026317 ENSMUST00000027554 1 1 1 103 8 14895177 14895195 TTGCTCCTAGAGATGAGCA 59 14896562 14896580 ATCATTAGCCACTGGTTGG 59 NA DesignNoJunction Mus musculus 50 Meig1 ENSMUSG00000026650 ENSMUST00000064685,ENSMUST00000115084,ENSMUST00000115083,ENSMUST00000115082,ENSMUST00000115081 1 5 5 133 2 3326593 3329132 GAAACAAGTTGCCATGGTC 59 3326478 3326496 AAACCTTCACTTTGTGGAC 58 NA DesignNoJunction Mus musculus 50 Tsc1 ENSMUSG00000026812 ENSMUST00000028155,ENSMUST00000113869,ENSMUST00000113870,ENSMUST00000113868,ENSMUST00000113867 1 5 5 91 2 28536814 28537442 CTCAGAAGCTCTCCAACAG 59 28537497 28537515 GTACAGCTCATTGACCTCC 59 NA Mus musculus 50 2010317E24Rik ENSMUSG00000026955 ENSMUST00000114293,ENSMUST00000100323 1 2 3 230 2 25228416 25228434 AACCCTGAGCTGTTATGTG 59 25230581 25231219 CTTCATCTGCTTCAACAGG 58 NA DesignRelaxed Mus musculus 50 Nup35 ENSMUSG00000026999 ENSMUST00000028382,ENSMUST00000111755 2 2 2 61 2 80497501 80498489 TGACTACCAGGTTATTTCTGAC 59 80498511 80498529 CTCTTGACACAAGGCTCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Dut ENSMUSG00000027203 ENSMUST00000082122,ENSMUST00000051605 3 2 2 80 2 125074981 125076714 TATGGAAGAGTAGCTCCAC 57 125082588 125082607 GTAATCCTCGTCTATGACAC 57 NA Mus musculus 50 Kif3b ENSMUSG00000027475 ENSMUST00000028977 3 1 2 190 2 153143413 153146021 AAATCAAGGCCATGGAGAG 59 153146375 153146395 TGAGGTGTAAGTCTCTTTCAG 59 NA Mus musculus 50 2410001C21Rik ENSMUSG00000027502 ENSMUST00000029005 3 1 2 101 2 172270830 172270848 GTATAACAAAGACGCGGTC 58 172270912 172272132 TCTGTCACATTCTTGATGCT 59 NA Mus musculus 50 Pag1 ENSMUSG00000027508 ENSMUST00000108384 1 1 1 80 3 9694123 9696130 ACAGAAGAGGAGATCTCAG 57 9694061 9694079 TTTCATACATGGTCCAGGT 58 NA Mus musculus 50 Eif6 ENSMUSG00000027613 ENSMUST00000029142,ENSMUST00000109639,ENSMUST00000109638 3 3 3 90 2 155652134 155652152 GTTCGAGAACAACTGTGAG 58 155651946 155652082 ACTATAGAAGTTCTCTGAGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rbl1 ENSMUSG00000027641 ENSMUST00000029170 3 1 1 80 2 156985440 156985460 TCTCTTGAAGAGTATTCCAGG 58 156978765 156985398 GTGGCATCTTCTATGTCAC 57 NA Mus musculus 50 Dclk1 ENSMUSG00000027797 ENSMUST00000054237,ENSMUST00000070418 3 2 4 116 3 55291821 55293677 GGAATTAGTGAAGGGTGGA 58 55293757 55293775 CTGTGCAGGTATTTGATGG 58 NA Mus musculus 50 4930579G24Rik ENSMUSG00000027811 ENSMUST00000029388 2 1 1 67 3 79435067 79435085 CTAAACTTCTGGAAGCCAC 58 79435116 79435134 TTCTGTACATTTCAGGGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mpdz ENSMUSG00000028402 ENSMUST00000102830,ENSMUST00000107261,ENSMUST00000107258,ENSMUST00000070461 3 4 4 80 4 80943449 80949506 GCTTCCTAAGGATCAAGGAG 59 80943388 80943407 GTTAGGCTTTCGATCATGAC 58 NA Nonspecific Mus musculus 50 Dctn3 ENSMUSG00000028447 ENSMUST00000030158 2 1 1 96 4 41664467 41666881 TTCATCTTAGCAGAGGAGC 58 41664389 41664407 CTTTGATAGAAGCGCTGTC 58 NA Mus musculus 50 Sh3gl2 ENSMUSG00000028488 ENSMUST00000107184 1 1 4 189 4 85022376 85023303 GATTGCAACTTTGGTCCTG 59 85023456 85023474 AAATGAGAATCTGCGTGTG 58 NA Mus musculus 50 Sh3bgrl3 ENSMUSG00000028843 ENSMUST00000105879 3 1 2 99 4 133683704 133684533 GAAGACTATGAACTCTTCGTG 58 133683625 133683643 CTAGCTGGATAGGATCGGT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Gpatch3 ENSMUSG00000028850 ENSMUST00000030662 3 1 1 122 4 133134240 133135709 CTCAGAAGAGGACGATGAC 59 133135793 133135813 TCCCACTTAAGTTCAATCTCC 59 NA Mus musculus 50 Zbtb48 ENSMUSG00000028952 ENSMUST00000066715 2 1 1 84 4 151396861 151396880 ATGTGGGAAGTGTTACTTCC 59 151396220 151396814 TGTGAAGACCTGTTCTGAG 58 NA Mus musculus 50 4930584F24Rik ENSMUSG00000029044 ENSMUST00000030910 3 1 1 78 5 26806299 26806317 CAGGAACTTCTTGAGTTGC 58 26786891 26806259 GTATATGGTTTCCAAGGTCAC 58 NA DesignNoJunction Mus musculus 50 Gpr125 ENSMUSG00000029090 ENSMUST00000030971,ENSMUST00000087390 3 2 2 81 5 50404679 50404697 GACGAACAACCGAATAGGT 59 50402786 50404635 ATTCCCTGAAAGGTTTAGCC 59 NA Mus musculus 50 Emilin1 ENSMUSG00000029163 ENSMUST00000031055 3 1 1 95 5 31222581 31222997 CCAGAGACAGGTGTATTCAC 59 31223053 31223073 CAATACTGCTTCCACTTTCTC 58 NA Mus musculus 50 Mapre3 ENSMUSG00000029166 ENSMUST00000031058 1 1 1 191 5 31164995 31165013 CAAGAAGATGGGTGTTGAC 58 31165728 31165746 AAGATCTGATCACCTGGGT 59 NA DesignNoJunction Mus musculus 50 Rest ENSMUSG00000029249 ENSMUST00000080359,ENSMUST00000113449 2 2 3 82 5 77704276 77704295 TGTGAACTTTGTCCTTACTC 57 77704340 77709743 TTAAATGGCTTCTCACCTG 57 NA Mus musculus 50 1700016H13Rik ENSMUSG00000029320 ENSMUST00000031261 2 1 1 95 5 104077967 104078452 CTTCAATGCAATCCATGGC 59 104077890 104077909 AAGCCTGGATTTCCTTACAC 59 NA Mus musculus 50 G3bp2 ENSMUSG00000029405 ENSMUST00000031352,ENSMUST00000113127 1 2 2 83 5 92494877 92495534 ACCAGAACTTGATGAAGAGTC 59 92494814 92494832 TTCTCTTGCACAGGTTCAG 59 NA Mus musculus 50 Eif2ak1 ENSMUSG00000029613 ENSMUST00000100487 2 1 1 80 5 144643055 144643074 CAGCATCCCAATATTGTTGG 59 144643116 144644855 AATCGGAACTCTGTCTTGTG 59 NA Mus musculus 50 1700018F24Rik ENSMUSG00000029620 ENSMUST00000031624 2 1 1 262 5 145804015 145804033 ATGCTTCAGACAGGAATCC 59 145805003 145805597 GAATATGGCACTCTTTGTGAG 59 NA DesignRelaxed Mus musculus 50 Hyal4 ENSMUSG00000029680 ENSMUST00000031691 1 1 1 80 6 24713873 24715700 AACTTCATCTGAGGAGAACTG 59 24715739 24715760 CTGGTCACATTGATTATGTAGC 59 NA Mus musculus 50 Cux1 ENSMUSG00000029705 ENSMUST00000065599,ENSMUST00000004097,ENSMUST00000111111 1 3 3 81 5 136961663 136961681 AAGATGAGAGCGAACAGTC 59 136883887 136961618 TTGCGTAAATCCTCTGGAG 59 NA Mus musculus 50 4631427C17Rik ENSMUSG00000029772 ENSMUST00000101611 2 1 5 91 6 29718897 29749447 GGTCAAGAAGATGAAGAGG 57 29749502 29749520 TATCTAAGTCAGGTCCAGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Abtb1 ENSMUSG00000030083 ENSMUST00000032169,ENSMUST00000095728 3 2 2 191 6 88788696 88788714 CTATTGAACCTCCTCCAGC 59 88788270 88788383 AGAAGAAAGCCTTGTAGCAG 59 NA Mus musculus 50 Wnt7a ENSMUSG00000030093 ENSMUST00000032180 1 1 1 265 6 91344636 91344654 ACCTATGCGATTATCGCTG 59 91316309 91344407 TTCTCCTCCAGGATCTTCC 59 NA DesignRelaxed Mus musculus 50 D630042F21Rik ENSMUSG00000030160 ENSMUST00000032263 1 1 1 107 6 129464264 129466068 CAACACTGAACATTGCCTG 59 129466631 129466649 AAGCATACTGAAGTCAGGC 59 NA Mus musculus 50 Slco1a4 ENSMUSG00000030237 ENSMUST00000032364 2 1 1 80 6 141768005 141768024 TTCATGCCTAAGTATCTGGA 57 141766418 141767963 AGGTAACATGTAAAGACCCA 58 NA Mus musculus 50 Ldhb ENSMUSG00000030246 ENSMUST00000032373 1 1 1 80 6 142447069 142447087 TCATCATTCCTCAGATCGT 57 142444244 142447027 CGTAAGTCAGAATATCCACTG 57 NA Nonspecific Mus musculus 50 Pdcd5 ENSMUSG00000030417 ENSMUST00000032577 1 1 1 82 7 36431194 36432331 GCATTTATTTGGTGATCCTG 57 36429400 36429419 GGGCTAAGATACTGTTTCTC 57 NA Mus musculus 50 Zfp108 ENSMUSG00000030486 ENSMUST00000072713 3 1 1 172 7 25042676 25043488 AAGAGGCAGTGACATTCAG 59 25045172 25045190 TCCCATTGCATGAAGAGTC 59 NA DesignNoJunction Mus musculus 50 Iqgap1 ENSMUSG00000030536 ENSMUST00000032751 1 1 1 80 7 87910223 87910244 AAACCACAGATATCTATGACCG 59 87907435 87910185 GTTTGAACAGGTACAAACTGAG 59 NA Mus musculus 50 1110006G06Rik ENSMUSG00000030590 ENSMUST00000032811 1 1 1 81 7 29937856 29938348 TCAACAAGGTGCTTATGGG 59 29937793 29937811 CTCTTCCAAGTAGGCATGG 59 NA Mus musculus 50 Acadsb ENSMUSG00000030861 ENSMUST00000015829 3 1 1 83 7 138584839 138586987 TATTATGCATCTGAGGTCGC 59 138587032 138587051 AGGGTAATCTTTGGTGTAGC 59 NA Mus musculus 50 Oat ENSMUSG00000030934 ENSMUST00000084500 2 1 1 87 7 139750003 139751336 AACCAAAGACTGTGATGCT 59 139749934 139749952 CCTGATGATATCACCGTGG 59 NA Mus musculus 50 Fgf16 ENSMUSG00000031230 ENSMUST00000033581 3 1 1 94 X 102967951 102969284 CTATGGATCGAAGAAACTCAC 58 102969340 102969358 AGTGTTTGTACAAGGTGGA 58 NA Mus musculus 50 Vsig1 ENSMUSG00000031430 ENSMUST00000033806 1 1 1 80 X 137467650 137470809 GACTTAACGTCTTCACATCC 58 137470852 137470870 GATGATAACAGCAGCTCCT 59 NA Mus musculus 50 Fgl1 ENSMUSG00000031594 ENSMUST00000034003,ENSMUST00000098813 1 2 2 81 8 42295105 42295123 AAGGAAGTCCAGTTTCTGG 59 42285950 42295061 CTGAACAATCTGCATACTGC 59 NA Mus musculus 50 Kifc3 ENSMUSG00000031788 ENSMUST00000034240 2 1 1 108 8 97626684 97627322 GACATCAACAAGGTGTTTGAG 59 97626596 97626614 CTCTCACTGTCACGATGAG 59 NA Mus musculus 50 Bean ENSMUSG00000031872 ENSMUST00000093245 3 1 1 122 8 106734956 106734974 TCATTGTGGGAAGCATCAG 59 106735060 106738922 CTCCAGATGCGTATTCTCG 59 NA Mus musculus 50 Nedd4 ENSMUSG00000032216 ENSMUST00000034740 1 1 1 80 9 72580457 72582827 AGAAGCAGACTGACATTCC 59 72582869 72582889 TAATCCTCCGGTAAGAATCCT 59 NA Mus musculus 50 Ankk1 ENSMUSG00000032257 ENSMUST00000034792 2 1 1 82 9 49224942 49226155 AGACAGTGTCTCAAGTGAC 58 49224878 49224896 TCTCGTAGACATCACTTGC 59 NA Mus musculus 50 Zcwpw2 ENSMUSG00000032443 ENSMUST00000111769,ENSMUST00000035017 1 2 2 119 9 117873621 117873639 CAACTCTACAGGTGTTCCG 59 117857008 117869088 TTTGGAAACTTGCATCCCT 59 NA InUTR Mus musculus 50 Ptgs2 ENSMUSG00000032487 ENSMUST00000035065 1 1 1 80 1 151949193 151949211 CCAACCTCTCCTACTACAC 58 151949255 151949734 CCTTATTTCCCTTCACACC 57 NA Mus musculus 50 Resp18 ENSMUSG00000033061 ENSMUST00000039534,ENSMUST00000067014 1 2 2 94 1 75270599 75270617 CAACAGTCAAGGTGAACAG 58 75268928 75270541 AAAGAAACCCTTGGTAGGA 57 NA Mus musculus 50 Trim45 ENSMUSG00000033233 ENSMUST00000094048,ENSMUST00000106984 3 2 5 81 3 100727253 100727273 ACAGAGAAGTAGAGAAGAGGT 59 100727316 100728875 TTCTTCTGTCGCCTATGAG 58 NA Mus musculus 50 Mcee ENSMUSG00000033429 ENSMUST00000037205 3 1 1 83 7 71545344 71545363 CTTTCTGCAGAAGAACAAGG 59 71556737 71556755 TTCAGATCCATCACAGCTG 59 NA DesignNoJunction Mus musculus 50 Spata2L ENSMUSG00000033594 ENSMUST00000098327 3 1 2 200 8 125759589 125759607 TCTGGTGGAAGACTTTGAC 59 125758135 125759427 CCTGAGAAGGTCTTGATAGTG 59 NA Mus musculus 50 Rfwd3 ENSMUSG00000033596 ENSMUST00000038739 3 1 1 80 8 113806461 113806480 TATTGTGATGGTCTGAGCTG 59 113803920 113806419 CATCTTAACACCAAAGCCTG 59 NA Nonspecific Mus musculus 50 Sfxn5 ENSMUSG00000033720 ENSMUST00000045846,ENSMUST00000059034 2 2 2 110 6 85237059 85239179 GAATGTCAGGTTACATTCCT 57 85219127 85219145 CATTATGGCTCTGGTTCAG 57 NA Mus musculus 50 Nrxn2 ENSMUSG00000033768 ENSMUST00000113462,ENSMUST00000113461,ENSMUST00000077182,ENSMUST00000113458,ENSMUST00000073522 2 5 6 90 19 6517247 6519265 AGAACACAGATGACCTCCT 59 6519318 6531277 AACTCTCCTCCAGTACTAGG 59 NA Mus musculus 50 BC016423 ENSMUSG00000033799 ENSMUST00000096069,ENSMUST00000110712 3 2 2 141 13 3596031 3596049 GAAGACGGAGTTACTTGGA 58 3593601 3594750 TTGATGAGTGCCAATTCCT 59 NA Mus musculus 50 Parl ENSMUSG00000033918 ENSMUST00000048642 1 1 1 82 16 20287984 20288002 GTCTTCTGCTTGTGGAGAG 59 20287133 20287938 CAAAGAACCTTGGATGCTG 59 NA Mus musculus 50 Fbxo16 ENSMUSG00000034532 ENSMUST00000043554 1 1 1 80 14 65889645 65889663 TCTCAACCATCAGCTTCTG 59 65906002 65912637 TCTGTCCATTTGTCAAACCA 59 NA Mus musculus 50 Ccpg1 ENSMUSG00000034563 ENSMUST00000085350,ENSMUST00000037977 1 2 2 80 9 72845265 72846837 CATCAATCATGAGGGTTCTG 58 72846878 72846898 GAACATTCTAGAGTCAGTCCA 58 NA Mus musculus 50 Foxn2 ENSMUSG00000034998 ENSMUST00000112238 3 1 2 126 17 88862593 88875203 GTCATGGCAAGGTTAATGG 58 88878618 88878636 CAGTGAGGTGATAAAGCAG 57 NA Mus musculus 50 Hel308 ENSMUSG00000035266 ENSMUST00000044684 2 1 1 80 5 101216051 101216072 TGACACAATCTATGAGGTAGAC 59 101214436 101216014 GCCTCAGAGTACTTATAACTCAG 59 NA Mus musculus 50 Pknox2 ENSMUSG00000035934 ENSMUST00000080754,ENSMUST00000039674 3 2 2 85 9 36743964 36743982 ACATCGAGAACTTTGTCCA 58 36731349 36743916 CTTCACCATCAGATTGTCCA 59 NA Mus musculus 50 Hist1h1t ENSMUSG00000036211 ENSMUST00000041052 3 1 1 61 13 23788008 23788026 AATAAAGGAGTCCTGGTGC 59 23788051 23788069 TTACTGAGCTTGAAGGAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ppfibp2 ENSMUSG00000036528 ENSMUST00000098134,ENSMUST00000040056,ENSMUST00000106759 2 3 3 80 7 114882753 114882771 AATGTGCTATTCACGTGCT 59 114882813 114884031 AAAGGTTACTCTCATCAGCAG 59 NA Mus musculus 50 Sh3tc1 ENSMUSG00000036553 ENSMUST00000070203,ENSMUST00000037959 1 2 2 89 5 36053566 36053584 ACTTCTCAGACGAAGATGC 59 36052321 36053514 CTTCTTCTAACCAGTCCAGG 59 NA Mus musculus 50 1700011E24Rik ENSMUSG00000036557 ENSMUST00000040609 2 1 1 95 17 87810925 87821865 GACAAAGATGAGTCACTCCA 59 87810605 87810623 AGAGCGAAATACGAAGCTC 59 NA Mus musculus 50 Trpv5 ENSMUSG00000036899 ENSMUST00000031901 3 1 1 81 6 41620985 41624236 TCCAAGAAGAAAGAGGCTC 58 41620922 41620943 GTCCATATTTCTTCCACTTCAG 58 NA Mus musculus 50 Zfyve28 ENSMUSG00000037224 ENSMUST00000042566,ENSMUST00000094868 2 2 2 103 5 34538738 34539234 TGTGGTAAGATCTTCTGTTCC 59 34538655 34538673 TGGAACATGTAGCAGTGTG 59 NA Mus musculus 50 Fgf2 ENSMUSG00000037225 ENSMUST00000108120 1 1 3 139 3 37279912 37295125 ATCAAACTACAACTCCAAGC 58 37303549 37303568 CGTTCAAAGAAGAAACACTC 57 NA DesignNoJunction Mus musculus 50 Tsr1 ENSMUSG00000038335 ENSMUST00000045807 1 1 1 80 11 74715079 74715097 CAGAGGCTATTCCAGATCC 58 74715141 74715519 TCAGTAAGTCATCTGCCTC 58 NA Mus musculus 50 Txnip ENSMUSG00000038393 ENSMUST00000074519,ENSMUST00000049093,ENSMUST00000090771 1 3 3 80 3 96363704 96363722 GAGTGCAGAAGATCAGACC 59 96363766 96363876 GGACACTGACGTAGATCAG 59 NA Mus musculus 50 9130409I23Rik ENSMUSG00000038768 ENSMUST00000036819 3 1 1 100 1 182985564 182985582 CTTCAATGTGGGCTATCAC 58 182989820 182989841 GTTTGTCATAGTATTCAGCTGC 59 NA DesignNoJunction Mus musculus 50 1700028J19Rik ENSMUSG00000038782 ENSMUST00000037220 3 1 1 90 7 51486176 51486194 TTCTACCTGTGCTGTTGTG 59 51485964 51485982 GTATACTGTAGCTCCACGT 58 NA DesignNoJunction Mus musculus 50 BC066135 ENSMUSG00000038980 ENSMUST00000038529 1 1 1 194 2 180017229 180017247 CTTTGCCAAGAATCACCAG 59 180016424 180016806 ATCTCATTGGTGAGGATGC 59 NA Mus musculus 50 Myo16 ENSMUSG00000039057 ENSMUST00000042103,ENSMUST00000110958 2 2 2 86 8 10507116 10532990 ACTTCCTGTCCAGATACGA 59 10533040 10533058 GAACAAGTCGACACCTCTC 59 NA Mus musculus 50 BC024814 ENSMUSG00000039345 ENSMUST00000046470 3 1 1 107 16 8482484 8484364 TATTGTACAGATGTCGGCAC 59 8484920 8484938 CAGCTCCTTGACCTTAACC 59 NA Mus musculus 50 Tspyl4 ENSMUSG00000039485 ENSMUST00000047935 2 1 1 60 10 34018186 34018205 GTTCATCTTTCAAAGCAACC 57 34018228 34018246 GCGCTCATATTCTTTGACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cylc2 ENSMUSG00000039555 ENSMUST00000041392 3 1 1 138 4 51241306 51241325 ATCTTCAGATTCTGAAGGCG 59 51241426 51242173 TTTAGTGGTCTTGGCTTCC 59 NA Mus musculus 50 Icmt ENSMUSG00000039662 ENSMUST00000048892,ENSMUST00000087301 1 2 2 67 4 151671672 151672806 TACCAGATAGCCATCAGAG 57 151672837 151672855 CTGAAACTTAGCAGCACAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Usp53 ENSMUSG00000039701 ENSMUST00000090379 3 1 1 80 3 122664152 122664251 ACTCTGTATGAGCAGTGTG 58 122664090 122664108 AATGTACCTCACGAGTTCG 59 NA Mus musculus 50 Slc7a12 ENSMUSG00000039710 ENSMUST00000037321 3 1 1 83 3 14499399 14505351 AGACCTTATAAGGTGTGGC 58 14505398 14505416 AGACTGAATCACTGGTGTG 59 NA Mus musculus 50 Defb5 ENSMUSG00000039785 ENSMUST00000038948 3 1 2 101 8 19247640 19250702 CCACTTGCAGAAATCTTTAGC 59 19250764 19250783 ATTCTGAAGAATGTTGCCCT 59 NA Mus musculus 50 5430411K18Rik ENSMUSG00000039840 ENSMUST00000044622 1 1 1 80 18 78178168 78178186 GTGTAAGACAGCGTTTCAC 59 78178229 78179060 TAACCCAAAGCATTCTTGTG 58 NA Mus musculus 50 Spsb1 ENSMUSG00000039911 ENSMUST00000038562,ENSMUST00000105685,ENSMUST00000105684 1 3 3 60 4 149281039 149281057 CTCCTGGAACAATAACGAC 57 149280997 149281016 GATCAACTTGTCATCTTCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pik3cd ENSMUSG00000039936 ENSMUST00000038859,ENSMUST00000105690,ENSMUST00000105688,ENSMUST00000105689 2 4 4 222 4 149034302 149034320 AGTATGAGCCACTCTTCCA 59 149034019 149034116 AACTCATGGAGACCTTTGC 59 NA DesignRelaxed Mus musculus 50 Tm7sf3 ENSMUSG00000040234 ENSMUST00000111655 1 1 2 127 6 146574725 146574743 ACATACTTTGTGCTCAGCA 59 146574267 146574636 CCCTTAGTAAATGAAACCGTG 58 NA DesignNoJunction Mus musculus 50 Otud6b ENSMUSG00000040550 ENSMUST00000041921 2 1 1 86 4 14745375 14745393 CATGCAAACCCATTCAGAC 59 14742796 14745326 TACTTCCCAAACTCTTCTGG 58 NA Mus musculus 50 AK129341 ENSMUSG00000040729 ENSMUST00000037397 3 1 1 98 9 8099801 8099820 CCAGTCTTTCACTCATAGGA 58 8095317 8099742 ACAGTAGAATCAGTGGTTCTC 59 NA Mus musculus 50 Otud3 ENSMUSG00000041161 ENSMUST00000097830,ENSMUST00000043226 1 2 2 92 4 138452694 138452712 AAATGAAGGCAGGATGGAG 59 138451819 138452638 TTGTTTGTGACCTTTGGGA 59 NA Mus musculus 50 Rnf123 ENSMUSG00000041528 ENSMUST00000047746 3 1 1 80 9 107970650 107970668 TGAAGCAGTTGATGATGTC 57 107970517 107970606 GGTAGTGGATCTGTAGACC 58 NA Mus musculus 50 Ipo9 ENSMUSG00000041879 ENSMUST00000041023 2 1 1 80 1 137315858 137315878 GCTTATGGAAATGTTGGTGAG 59 137306043 137315818 ACTTCTCGAGTAAACTCTGTC 59 NA Mus musculus 50 Ctf1 ENSMUSG00000042340 ENSMUST00000047393 2 1 1 80 7 134857457 134857476 CCTCAATCTCATTCCTACCC 59 134857519 134857537 CTGCATATTTGGTCAGGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 2310040C09Rik ENSMUSG00000042377 ENSMUST00000093019 2 1 2 82 11 61515261 61515968 CTCCTACAGCTTCACATGG 59 61516011 61516032 CAAACATCTCTACTACCTGACC 59 NA Mus musculus 50 Atxn2 ENSMUSG00000042605 ENSMUST00000051950,ENSMUST00000111762,ENSMUST00000111761 3 3 3 80 5 122222790 122227391 ATGATGTGTCTAATGGATGGG 59 122227431 122227451 TATCATATGTGGACACCACAC 59 NA Mus musculus 50 Dnali1 ENSMUSG00000042707 ENSMUST00000106175,ENSMUST00000036383 1 2 2 161 4 124736793 124736811 GAGATCCACATGACCATCG 59 124736346 124736364 TTCATTCACTTGCCTCTCC 59 NA DesignNoJunction Mus musculus 50 Krtcap2 ENSMUSG00000042747 ENSMUST00000040888 3 1 1 106 3 89051039 89053002 TCTTCCCTGAGATTCTCCT 58 89053502 89053520 GTACAGACCAACCATGGAG 59 NA Mus musculus 50 Mcts2 ENSMUSG00000042814 ENSMUST00000062148 3 1 1 60 2 152513076 152513095 GGTATTAAGAGCCAACTGAC 57 152513118 152513136 TGATTTGATTAAGCCACGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Snai1 ENSMUSG00000042821 ENSMUST00000052631 2 1 1 230 2 167364564 167364583 GTAACAAGGAGTACCTCAGC 59 167367476 167367494 ATCTCTTCACATCCGAGTG 58 NA DesignNoJunction Mus musculus 50 Trim72 ENSMUSG00000042828 ENSMUST00000106248,ENSMUST00000081042 3 2 2 84 7 135151523 135151976 TTCCTCATGAAATTCTGCCT 59 135152620 135152638 GCTGGATATCTAGCCTTGC 59 NA Mus musculus 50 Onecut1 ENSMUSG00000043013 ENSMUST00000056006 1 1 1 60 9 74710542 74710561 GGTAGTTTCACACTTATGCG 58 74710579 74710602 GGGTATAGAGGTTATTCATAGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lysmd4 ENSMUSG00000043831 ENSMUST00000058771 1 1 1 163 7 74368625 74368643 GAAGAGTCACATCAGGTGG 59 74368770 74370760 ATATCTGCAACTTTGCAGC 58 NA Mus musculus 50 N6amt1 ENSMUSG00000044442 ENSMUST00000054442 3 1 1 119 16 87357220 87362769 TGATCACAGATTTGGTGCA 59 87366386 87366405 CTTCTATTCCACGACTTCCT 58 NA Mus musculus 50 4933433P14Rik ENSMUSG00000044715 ENSMUST00000051934,ENSMUST00000109906 2 2 2 83 12 106937147 106937165 GAACAGATACTGCCTGGAG 59 106938872 106938891 GTTTGCAAATGATCCTCCAC 59 NA DesignNoJunction Mus musculus 50 Rnf216 ENSMUSG00000045078 ENSMUST00000053498 2 1 1 80 5 143852598 143854683 CCTGACAGAAACACATAAACC 59 143852538 143852557 AATCTGTTCAGATCTTGCCA 59 NA Mus musculus 50 Rbm16 ENSMUSG00000046201 ENSMUST00000076734 2 1 2 80 17 3185803 3185821 CGACAAGATTCATTTCGGG 58 3185864 3187597 CCAGGCAATCTTAATGACCT 59 NA Mus musculus 50 Ppargc1a ENSMUSG00000046379 ENSMUST00000053488 3 1 1 60 5 51847213 51847232 GAGCATCAGGATTTCATCTG 58 51847172 51847191 ACTCCAAAGTTTAGTGACTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 D230037D09Rik ENSMUSG00000046675 ENSMUST00000057416 3 1 1 60 12 103982822 103982841 GAGAATGATGAACTTCCGTC 58 103982864 103982882 TGCTAGCAAATACAGTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4732473B16Rik ENSMUSG00000046694 ENSMUST00000051676 3 1 1 61 4 133042387 133042406 CCTTCCAAATCATCTTGGAC 58 133042430 133042448 CGACATAGGTGTGGATGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr15 ENSMUSG00000047293 ENSMUST00000089318 3 1 1 60 16 58718534 58718552 CTAGGACTATGGAGGACTG 57 58718492 58718510 TCACGGAGATCACATAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp768 ENSMUSG00000047371 ENSMUST00000060783 1 1 1 60 7 134488380 134488671 CTCTCAAAGATCCTGCAGG 59 134488338 134488356 TCTCGCTGAGAAATTTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pea15b ENSMUSG00000047652 ENSMUST00000058341 2 1 1 60 5 77940532 77940553 CATTCTTTAAGACAAGGACAGC 59 77940493 77940512 TCTTCTCACTGGGAATTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Krt8 ENSMUSG00000049382 ENSMUST00000023952 2 1 1 251 15 101829360 101829870 CATGAAGAGGAGATCCGTG 59 101828870 101828889 GTTCATCTCGGAGATCTCTG 59 NA DesignRelaxed Mus musculus 50 Olfr466 ENSMUSG00000049806 ENSMUST00000058907 1 1 1 60 13 65253908 65253929 TAACCCTCTTCTATACTCTGTG 58 65253950 65253968 CCCTGATACCAACAATCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rlf ENSMUSG00000049878 ENSMUST00000056635 1 1 1 80 4 120831923 120843230 TTCAGGAGATTGCAAAGGT 59 120831861 120831879 CTGTGTTATCCTGACCCTC 59 NA Mus musculus 50 Tmc8 ENSMUSG00000050106 ENSMUST00000106334,ENSMUST00000050874 1 2 2 114 11 117646572 117647709 TGAACTGAAGATGGAGCTG 59 117647787 117647805 CACAATGAGGATGTTGGTG 58 NA Mus musculus 50 A830091I15Rik ENSMUSG00000050132 ENSMUST00000108287,ENSMUST00000061174 2 2 2 84 11 78301120 78301138 ACCTGCTTCTAAGACTCAC 58 78300949 78301072 TCCCTAAAGAACCTCTTGC 58 NA Mus musculus 50 Htr5b ENSMUSG00000050534 ENSMUST00000055884 1 1 1 60 1 123407018 123407036 CCCTTGATTTACACTGCCT 59 123406976 123406996 TAGTAAAGAGGCTCTTGAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Adra1b ENSMUSG00000050541 ENSMUST00000067258 3 1 2 182 11 43650358 43657752 GAAATTTGATCCCGAAGCC 59 43649683 43649701 GTGGTCTTCTTTCCAGAGG 59 NA InUTR Mus musculus 50 Creg2 ENSMUSG00000050967 ENSMUST00000053355 2 1 1 216 1 39704661 39704679 CTGGTGAAGAATCCCACAG 59 39680045 39680064 AGAACCATTCATACTGTCGG 59 NA DesignNoJunction Mus musculus 50 D330012F22Rik ENSMUSG00000050973 ENSMUST00000062915 1 1 1 60 7 87383119 87383137 CACATCATTTGCAGGAGAC 58 87383161 87383179 TGTTTCTCCCAATCCTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 4930579K19Rik ENSMUSG00000051074 ENSMUST00000058992 3 1 1 61 9 98463634 98463653 GGTGATTACCCTTCAAAGAG 57 98463592 98463611 ACCAACTGAAGGTACATAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nyx ENSMUSG00000051228 ENSMUST00000050434 2 1 1 69 X 13064342 13064360 GTTGAATGACAGCTTTCGG 59 13064393 13064411 AGAGGTGAAGAGAAACGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rps19bp1 ENSMUSG00000051518 ENSMUST00000052499 1 1 1 60 15 80091809 80094415 TAGCTGAGTACCAGAAACG 58 80091767 80091786 GTCATAAACTTCAGGTTTGC 57 NA DesignNoJunction Mus musculus 50 AU021092 ENSMUSG00000051669 ENSMUST00000050160 1 1 1 180 16 5216946 5217903 TACTAGGAACAGGGACAGAC 59 5216156 5216174 ATGTCCATGTAGTGTTGGC 59 NA Mus musculus 50 1810063B05Rik ENSMUSG00000051671 ENSMUST00000059093 2 1 1 207 8 128946598 128946616 TTCCATGAAGGAAAGGCAG 59 128948959 128948977 TGAAGACTGGAATCCTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc39a1 ENSMUSG00000052310 ENSMUST00000015467 2 1 1 91 3 90055859 90055877 CTCAGTATTTGAGGGCCTG 59 90055932 90055950 GAATGCCTTTGTGAAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mpp3 ENSMUSG00000052373 ENSMUST00000107168,ENSMUST00000100400,ENSMUST00000062801,ENSMUST00000107167 1 4 4 206 11 101886451 101886695 GATTCATGAGAAACTCCGC 58 101884732 101884750 GGATCGAAGTTCTTCTGGG 59 NA DesignNoJunction Mus musculus 50 Trpm3 ENSMUSG00000052387 ENSMUST00000099569,ENSMUST00000087576,ENSMUST00000074770,ENSMUST00000037901,ENSMUST00000099564,ENSMUST00000087569,ENSMUST00000099566 2 7 7 60 19 22773410 22786208 CCAACAAAGCTATGTATGTCC 59 22786230 22786248 AGGTGTAGCAAGAGATCAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Pmp2 ENSMUSG00000052468 ENSMUST00000029034 1 1 1 146 3 10182399 10182417 TTTGATGAAACCACAGCTG 58 10180792 10182133 TATACACTCCACTACCATTCTC 58 NA Mus musculus 50 Psg24 ENSMUSG00000053228 ENSMUST00000108491,ENSMUST00000065540 1 2 2 60 7 17737058 17737076 CCTATAGCAGAGGTGTGAC 58 17737099 17737118 CCATTTCGGTACAATGTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000053280 ENSMUSG00000053280 ENSMUST00000065610 3 1 1 60 17 31570937 31570955 CTGTTGCAATTGTACAGGG 59 31570895 31570914 CAGTATGCAAAGAACACCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Adamts18 ENSMUSG00000053399 ENSMUST00000093113,ENSMUST00000074650 2 2 3 130 8 116369052 116372095 TGATTACGTCTTTGTCGTG 57 116368940 116368958 ATGCTGAAACTCGGTAGTG 59 NA DesignNoJunction Mus musculus 50 Mapk14 ENSMUSG00000053436 ENSMUST00000114754,ENSMUST00000114758,ENSMUST00000004990,ENSMUST00000062694,ENSMUST00000114757,ENSMUST00000114752 2 6 6 80 17 28865406 28865859 TAACCAGACAGTGGATATTTGG 59 28865900 28865918 TCTGTACCAGGAAACAACG 59 NA Mus musculus 50 ENSMUSG00000053512 ENSMUSG00000053512 ENSMUST00000064970 2 1 1 124 X 45816241 45816259 GACTGGAAAGGTTAGAGCA 58 45816135 45816153 CTCCAACTTTCCTGGATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cklf ENSMUSG00000054400 ENSMUST00000034342,ENSMUST00000081228 1 2 4 103 8 106781249 106781267 TCACTGGGTTTGAAGTCAC 59 106781333 106785382 AATAACATCAAGCAAAGGCC 59 NA Mus musculus 50 Smyd1 ENSMUSG00000055027 ENSMUST00000114190,ENSMUST00000074301,ENSMUST00000068379,ENSMUST00000114188,ENSMUST00000114186 1 5 6 121 6 71166879 71169259 GGCTACATGAAACTCTACCA 59 71166777 71166795 TAGGCTTTGCAGATCATCC 59 NA Mus musculus 50 Mtap6 ENSMUSG00000055407 ENSMUST00000107100 3 1 2 263 7 106417807 106464200 GTAAGCAGCTCTTACAGGA 58 106484509 106484527 TTAGATGCATCACTGGTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 ENSMUSG00000055465 ENSMUSG00000055465 ENSMUST00000069071 1 1 1 73 13 4390445 4390464 GAGTTTCAAACAGAAGTGTG 57 4390391 4390409 TTTGATAAGTGCCATAGCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gsdmc4 ENSMUSG00000055748 ENSMUST00000063530 2 1 1 90 15 63726772 63726790 ATGACCTTTCCAGACAGAC 58 63726503 63726718 CTATCCAAGAGCCTGTCTC 58 NA Mus musculus 50 Magea3 ENSMUSG00000055816 ENSMUST00000067254,ENSMUST00000079867 1 2 2 73 X 151383152 151383171 CAGAGGCTTTACAAGATGAG 57 151383098 151383116 TAGGTCAGAGGAGTTGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zkscan5 ENSMUSG00000055991 ENSMUST00000085671,ENSMUST00000031601 3 2 2 102 5 145979737 145980925 GAGAAATCCCAAAGATGCAG 58 145980990 145981008 CTTCTCCCGATAGTTCCAG 58 NA Mus musculus 50 Tas2r134 ENSMUSG00000056115 ENSMUST00000070028 3 1 1 60 2 51483859 51483878 CTAAGCAACACCAAGATGAG 58 51483901 51483919 TGGGAATACAAAGGTCTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1810011O10Rik ENSMUSG00000056313 ENSMUST00000052622 3 1 1 87 8 25549312 25549330 CTCGTCTCTTCGAGTAAGC 59 25549243 25549261 GTTCTCAAAGATGTTGCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tas2r123 ENSMUSG00000057381 ENSMUST00000071696 3 1 1 60 6 132797215 132797234 ATGTGGAAATAGTAACGGGA 58 132797256 132797275 TCCATGATGTTCACTAATGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Phex ENSMUSG00000057457 ENSMUST00000079945 1 1 1 80 X 153600196 153612146 CACAATTTAGGGTCAATGGT 58 153600135 153600153 TCATAGTGGAATTTCGTGG 57 NA Mus musculus 50 Brd9 ENSMUSG00000057649 ENSMUST00000099384 2 1 1 81 13 74092908 74092929 GGACTTCATGTCAATGAAACAG 59 74092970 74095177 CTCCTTCTTTACTTTCCCGA 59 NA Mus musculus 50 4833446K15Rik ENSMUSG00000058152 ENSMUST00000080721 2 1 1 138 18 59339194 59568547 TCTTATGAGATGCAGCAGC 59 59568649 59568667 GAAGTCTGTACTGGTACGC 59 NA Mus musculus 50 Phf21a ENSMUSG00000058318 ENSMUST00000090586,ENSMUST00000111297,ENSMUST00000111294,ENSMUST00000111293 3 4 9 146 2 92160479 92160497 AAACTACAAACAGCACAGC 58 92160606 92167078 TACAGTCTTCTGTGATGCAG 59 NA Mus musculus 50 Wdr91 ENSMUSG00000058486 ENSMUST00000081214 3 1 1 88 6 34859414 34859434 AGGATATCTATCGACCTACCA 58 34858307 34859364 GTCATTTCGGTTTGTCTGG 59 NA Mus musculus 50 NM_146333.1 ENSMUSG00000059259 ENSMUST00000071176 1 1 1 60 2 90241662 90241680 CCCTATCATCTACTCCCTG 57 90241702 90241722 GGTCCATAGAATCTTAATGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mbtd1 ENSMUSG00000059474 ENSMUST00000107853,ENSMUST00000107850,ENSMUST00000063718,ENSMUST00000107854,ENSMUST00000021221,ENSMUST00000063645,ENSMUST00000107852 3 7 7 81 11 93771649 93771668 CTAAATTAGCTGCCTATGCC 58 93771712 93773699 ACAGAGATTGCAGAATTGC 58 NA Mus musculus 50 Ccdc28a ENSMUSG00000059554 ENSMUST00000080860,ENSMUST00000052648 1 2 2 276 10 17950310 17950328 ACTCAGGTTGTTAATGCCA 59 17939440 17944712 ATTCATTTCCAAACGCCTG 59 NA DesignRelaxed Mus musculus 50 ENSMUSG00000059659 ENSMUSG00000059659 ENSMUST00000082030 1 1 1 129 6 128389702 128422760 GTTATACAGCCTGGTCCTG 59 128422853 128422871 CTAGACAAGACGGAACCAG 59 NA InUTR Mus musculus 50 Alox5ap ENSMUSG00000060063 ENSMUST00000071130 3 1 1 81 5 150096965 150096984 AATACTTTGTCGGCTATCTG 57 150099174 150099192 AACAGGAACAGGATGATCC 58 NA DesignNoJunction Mus musculus 50 MGI:106064 ENSMUSG00000060628 ENSMUST00000072372 3 1 1 78 X 12869767 12869787 CTCCAGAAGAGTAACAAACTG 58 12869827 12869845 CAGAATTGACACCTTGTGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 NM_130876.3 ENSMUSG00000060691 ENSMUST00000081334 2 1 1 61 16 88869443 88869462 TATGGCTCTAGCTATGGAGG 59 88869401 88869420 TATCTTCCACAGCATGAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700129I15Rik ENSMUSG00000060726 ENSMUST00000113154,ENSMUST00000073674,ENSMUST00000113152 2 3 3 146 X 132254308 132255124 GGAGCTGTTAGTCTGATAGTC 59 132253270 132253288 AAACTCCTTCTCTTGCTCG 59 NA DesignNoJunction Mus musculus 50 Olfr1337 ENSMUSG00000061075 ENSMUST00000077247 2 1 1 60 4 118454766 118454787 CTATACTGTCATCCTCAACTGG 59 118454727 118454745 ACATATCCAAGACCCTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sox21 ENSMUSG00000061517 ENSMUST00000082178,ENSMUST00000071156 1 2 2 146 14 118634756 118634774 GGAGAACCCTAAGATGCAC 59 118634628 118634646 TACTTGTAGTCGGGATGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ugt2b38 ENSMUSG00000061906 ENSMUST00000072818 3 1 1 82 5 87849579 87850630 CCTTTGCCTAAGGATATGGA 58 87849516 87849534 CTAACCATTGACCCAAGTG 58 NA Nonspecific Mus musculus 50 Olfr784 ENSMUSG00000062239 ENSMUST00000082342 1 1 1 60 10 128824931 128824951 ATGAGTATTCTCACTGGAGAC 58 128824972 128824991 AGAATAATTGAGCTGCACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr251 ENSMUSG00000062388 ENSMUST00000072731 1 1 1 60 9 38186215 38186235 CACATCATAACTGTTAGCCTC 58 38186257 38186275 ATGTTGGCTTGATATAGGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Hmgb1l ENSMUSG00000062477 ENSMUST00000082150 1 1 1 64 6 131558396 131558414 ATATTGCTGCCTACAGAGC 59 131558350 131558368 TTCAGCGTTGATTACCCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr531 ENSMUSG00000062712 ENSMUST00000080153 3 1 1 60 7 147586120 147586138 TGGTGTCCATCATCTACAC 58 147586078 147586097 CTCAGAGTGTAGATGAGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 4932422M17Rik ENSMUSG00000062946 ENSMUST00000081006 2 1 1 60 5 123590453 123590471 AATTCAGGACATCTCAGGC 59 123590494 123590513 CCATTCTGTCCTTAACTGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 1810014B01Rik ENSMUSG00000063320 ENSMUST00000079648 3 1 1 98 10 82082953 82085461 CCTGACCTGACAATACCTG 59 82082873 82082891 CTGTGAAACATGAGGTTCG 58 NA Mus musculus 50 Alg11 ENSMUSG00000063362 ENSMUST00000110737,ENSMUST00000072572 2 2 2 76 8 23176345 23176363 TTACTTGTCTGAAGCGACC 59 23176403 23178370 CCATACACTCGACAACTCC 59 NA DesignNoJunction Mus musculus 50 D630045J12Rik ENSMUSG00000063455 ENSMUST00000078942,ENSMUST00000090291 3 2 2 87 6 38097245 38097263 AAACGTTCTCCTAAGCCAC 59 38097176 38097194 CACTGTCTGTGGTGATGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nupl1 ENSMUSG00000063895 ENSMUST00000111241,ENSMUST00000041905 1 2 2 80 14 60853114 60853134 GCCGAAATAGCTTTAAGAACC 59 60851490 60853074 TATTCTGAAGTAGTCAGCAGG 58 NA Mus musculus 50 2210021J22Rik ENSMUSG00000064284 ENSMUST00000071876 3 1 1 61 15 85641358 85641377 GCCTTATCAAGTGGACTAGG 59 85639739 85641334 CTGTCTCAGATGCCATCAG 59 NA DesignRelaxed, InUTR Mus musculus 50 Hhip ENSMUSG00000064325 ENSMUST00000079038 3 1 1 80 8 82514260 82516385 GGAAGAGATTATGAAAGTGAGC 58 82514201 82514220 GTAAACAAATCCACCAACCA 58 NA Mus musculus 50 mmu-mir-217 ENSMUSG00000065415 ENSMUST00000083481 3 1 1 61 11 28663754 28663772 TTGCAGATACTGCATCAGG 59 28663796 28663815 ATGCATTAGGAACTGATGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-30c-1 ENSMUSG00000065490 ENSMUST00000083556 2 1 1 60 4 120442190 120442211 TGTAAACATCCTACACTCTCAG 59 120442151 120442169 GGAGTAAACAACCCTCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-34a ENSMUSG00000065493 ENSMUST00000083559 2 1 1 60 4 149442578 149442596 TCTTTGGCAGTGTCTTAGC 59 149442619 149442638 ATACTTGCTGATTGCTTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-350 ENSMUSG00000065573 ENSMUST00000083639 3 1 1 65 1 178702521 178702539 ACAAGAGTAAAGTGCATGC 58 178702474 178702492 AAAGTGTATGGGCTTTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Oog2 ENSMUSG00000066030 ENSMUST00000105758,ENSMUST00000080405 2 2 2 300 4 143783904 143783922 GAATTTCTATTCGCCACCC 58 143784186 143784727 TCTGAGTTTGCACCTACTG 59 NA DesignRelaxed Mus musculus 50 Numa1 ENSMUSG00000066306 ENSMUST00000084852 2 1 1 80 7 109136315 109139095 ATTAACACCATCCATGACAC 57 109139137 109139156 ACTGCAAACAAAGTCTAGTC 58 NA Mus musculus 50 Numa1 ENSMUSG00000066306 ENSMUST00000084852 3 1 1 80 7 109140172 109140191 ATCCTTCATCTACACAATGC 57 109140234 109141161 GCATTATCATCTTGGCCAG 58 NA Mus musculus 50 Serpina3f ENSMUSG00000066363 ENSMUST00000101080 1 1 1 103 12 105457767 105458424 GAGAACTTCTCAGGTGGTC 59 105458491 105458509 CACCTTGACAACATTGGAG 58 NA Mus musculus 50 ENSMUSG00000067371 ENSMUSG00000067371 ENSMUST00000087544 2 1 1 62 6 56747905 56747924 TTCCCAAAGTTCTATTCAGC 57 56747949 56747967 CCTCAAACACGAACAACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Krt74 ENSMUSG00000067596 ENSMUST00000088018 1 1 1 80 15 101591085 101591313 ACGATGAAGAGATTTCCCA 58 101591023 101591041 CCAGATCTCGATTGTTGTC 57 NA Mus musculus 50 Tuba3b ENSMUSG00000067702 ENSMUST00000088246 2 1 1 68 6 125231029 125231047 GCAACCATCAAGACAAAGC 59 125228664 125231000 AATACCCACCTTAAATCCAGTC 59 NA DesignRelaxed Mus musculus 50 1500009C09Rik ENSMUSG00000068099 ENSMUST00000089154 1 1 1 60 15 82090037 82090055 CTGTCTACCTGGTCATCTC 58 82090079 82090097 AAGTAGTAGATGCAGGCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cst7 ENSMUSG00000068129 ENSMUST00000089200 1 1 1 81 2 150403436 150403454 AACTACATGCAGGAAGACC 59 150403498 150404164 ATATAGAGTCCGCTTCAAGG 58 NA Mus musculus 50 Ndufa12l ENSMUSG00000068184 ENSMUST00000022206 3 1 1 84 13 108881781 108881799 AAAGGATTGTAGAAGCAGC 57 108871575 108881733 CTTCTAATCCATGCTTCCC 57 NA Mus musculus 50 Slc4a5 ENSMUSG00000068323 ENSMUST00000113900 2 1 1 60 6 83217505 83217524 CCAAACATCAGAATTGAGCC 59 83217545 83218198 ACACAGATTTCCTCTTGTCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 A8Y5G8_MOUSE ENSMUSG00000068706 ENSMUST00000090488 3 1 1 99 15 5070819 5070837 GCTGTGCTGAATTTGTGTC 59 5070738 5070756 ATGGTCATCTGGTCAAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Arid1b ENSMUSG00000069729 ENSMUST00000092723,ENSMUST00000115799,ENSMUST00000077329 2 3 3 60 17 5343017 5343035 TATCAGCTGTCCTGAACTC 58 5343056 5343077 CCAATCTGAAACAGTACATCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Arid1b ENSMUSG00000069729 ENSMUST00000092723,ENSMUST00000115799,ENSMUST00000077329 3 3 3 60 17 5343003 5343023 GCTGGATATCTCAATATCAGC 58 5343043 5343063 TACATCACAGATGACAGATGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG214403 ENSMUSG00000070594 ENSMUST00000111989,ENSMUST00000111986,ENSMUST00000027612 3 3 3 107 1 141635941 141636045 CTGTATGTGTTGAGGAGGA 58 141635852 141635870 TGAACTCCACTGAATCTCC 58 NA Mus musculus 50 MGI:2442344 ENSMUSG00000070689 ENSMUST00000094609 2 1 1 200 1 128425322 128592272 CAGTCTTGTGGAATACATGGA 59 128425142 128425160 CTTGACTGTCCAAGGACTG 59 NA InUTR Mus musculus 50 6030436E02Rik ENSMUSG00000070865 ENSMUST00000094889 1 1 1 81 5 33174497 33178272 CAACGGAGGAAATGTACAC 58 33174181 33174199 TCTGGAAACAGTACAGGTC 58 NA Mus musculus 50 Tbpl1 ENSMUSG00000071359 ENSMUST00000095794,ENSMUST00000092668 2 2 2 111 10 22431720 22431739 TTTATAAGCGTGATGTTGGG 58 22429007 22429172 TCTTCTTCACTTGTTGCTC 57 NA Mus musculus 50 Hist1h2ao ENSMUSG00000071478 ENSMUST00000090776 3 1 1 79 13 23666268 23666288 CCCAGCGAATAATATAAAGGC 58 23666326 23666347 CCAGACATTGTACAGATTAAGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Cpa2 ENSMUSG00000071553 ENSMUST00000096066 2 1 1 80 6 30495586 30497111 ATACCCTGGAAGAGATTTACC 58 30497152 30497171 AACCGATATTCACTTTGCTC 58 NA Mus musculus 50 Vmn2r122 ENSMUSG00000072049 ENSMUST00000096792 1 1 5 89 X 121243565 121244737 GAGGAACAGTTTCTCAGGT 58 121243494 121243512 AGTCTGCTGTTTCTTCCTG 59 NA Mus musculus 50 Dnahc12 ENSMUSG00000072668 ENSMUST00000100792 1 1 1 80 14 27688466 27688484 CCCTGGGTTGGAATATTCC 59 27688525 27689967 CGTTTATGAACAACTGTAGCTG 59 NA Mus musculus 50 EG331493 ENSMUSG00000073010 ENSMUST00000101297 3 1 2 80 X 103869997 103904424 ATTTCTGTGGAATCCTGCC 59 103904468 103904486 TTGAACATCAGGTACCTGC 59 NA InUTR Mus musculus 50 Hspa1l ENSMUSG00000073415 ENSMUST00000097339 2 1 1 61 17 35115696 35118407 GATTCTTATCAAAGGTTCCCAC 59 35115656 35115674 ATGCAATGAGGTCCTTTCC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Mobkl2b ENSMUSG00000073910 ENSMUST00000102975 2 1 1 125 4 34933261 34933279 CTTTGACCGTGTCATTGTG 59 34901286 34933172 GTCATCTCTTTCAAGGGCT 59 NA Mus musculus 50 Olfr678 ENSMUSG00000073913 ENSMUST00000098160 2 1 1 60 7 112218802 112218820 CACATACTTCTAGCCAACC 57 112218843 112218862 CATAGATAACAGGGTTCAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rhog ENSMUSG00000073982 ENSMUST00000106923,ENSMUST00000098230 2 2 2 60 7 109388679 109388699 CATCTGCTATACAACTAACGC 58 109388639 109388658 GTAATTGTCAAACACAGTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mlycd ENSMUSG00000074064 ENSMUST00000098367 1 1 1 97 8 121931518 121931536 CTTCTACTCCATCAGCCTG 59 121931597 121933897 GAAATTCCTTCTGCAGCTC 58 NA Mus musculus 50 ENSMUSG00000074106 ENSMUSG00000074106 ENSMUST00000093178 2 1 1 285 8 109572556 109572574 TAGTTCCCGTGTAACTTCC 58 109572823 109572841 TAACAGAGAAGAGGGAACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Dda1 ENSMUSG00000074247 ENSMUST00000098645 1 1 1 113 8 73995964 73995982 ACAACAAGAGCAACTTCAG 58 73996135 73997682 TCACAATGATCTGTTCTGAC 57 NA Mus musculus 50 ENSMUSG00000074826 ENSMUSG00000074826 ENSMUST00000099412 1 1 1 126 13 67008238 67008828 ATGTCAAGTGTAGACTGCTG 59 67008917 67008935 ATCTGCTTGCAAACATGTC 59 NA InUTR Mus musculus 50 Eif4e1b ENSMUSG00000074895 ENSMUST00000110003,ENSMUST00000066241 2 2 2 122 13 54888241 54888259 AATACAGCAGGGAAGTGTG 59 54888342 54888659 CTTTGTATATTTGCCCGATCTG 59 NA InUTR Mus musculus 50 Olfr1314 ENSMUSG00000074945 ENSMUST00000099598 2 1 1 60 2 111932621 111932639 TTTCATGTGTCACTTGTCC 57 111932579 111932599 GAGATGACTTTGTGCTTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1138 ENSMUSG00000075149 ENSMUST00000099848 1 1 1 60 2 87577747 87577765 TCTACCTGTACATCACACC 57 87577705 87577724 ACATGAAGAGCATAGTTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1104 ENSMUSG00000075166 ENSMUST00000099869 2 1 1 60 2 86862239 86862258 CCATACATGATAGGCTTCAC 57 86862198 86862216 GAGGCAAACTGCTTATCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1000 ENSMUSG00000075215 ENSMUST00000099921 2 1 1 60 2 85448513 85448531 TGTGATGTTTCTCCATTGC 58 85448471 85448490 ACACCAACTTAATCATCTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr994 ENSMUSG00000075219 ENSMUST00000099925 3 1 1 60 2 85270831 85270851 TGATCCTCCTTATCAACACTG 59 85270791 85270812 TGTTGTAGGAAGAAGTACATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000011393 ENSMUSG00000075520 ENSMUST00000100388 3 1 1 157 2 16049720 16049738 GAAGATGAATCCAGCTGTG 58 16063938 16072389 TGTATTGGACACTCTGAGC 58 NA Mus musculus 50 1700113I22Rik ENSMUSG00000075528 ENSMUST00000107257,ENSMUST00000107259,ENSMUST00000107252,ENSMUST00000103102,ENSMUST00000093933,ENSMUST00000080965 2 6 7 98 11 101283263 101285108 AAGGAGGATATAAAGCCTGTG 59 101283185 101283203 ATAATGTTCCACCTGAGCC 59 NA Mus musculus 50 mmu-mir-182 ENSMUSG00000076361 ENSMUST00000102406 2 1 1 60 6 30115963 30115981 CAATGGTAGAACTCACACC 57 30115921 30115941 ATAGTTGGCAAGTCTAGAACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRBV30 ENSMUSG00000076481 ENSMUST00000103282 1 1 1 73 6 41231391 41231689 TACTTCTTTGGAGCCAAGG 59 41231726 41231744 ACTTTGACAGATGTCCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-61 ENSMUSG00000076552 ENSMUST00000103353 3 1 1 173 6 69367172 69367372 AGTCATAATGTCCAGAGGAC 58 69367018 69367036 TTGGATGTGCGATAAATCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV6-14 ENSMUSG00000076593 ENSMUST00000103394 2 1 1 295 6 70385230 70385426 GTCTGGTGTTGATGGAGAC 59 70384953 70384972 AATTCCAATGTTGCAGACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV3-9 ENSMUSG00000076597 ENSMUST00000103398 3 1 1 65 6 70538644 70538662 CTAGAATCTGGAGTCCCTG 58 70538690 70538709 GATGGTGAGAGTGAAGTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV13-2 ENSMUSG00000076675 ENSMUST00000103484 2 1 1 60 12 115596113 115596134 GTGGATTGCTGTAATTACAGTC 59 115596074 115596094 CACAGACTCTGCATAATTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV16D/DV11 ENSMUSG00000076796 ENSMUST00000103606 2 1 1 92 14 53667385 53667404 CAGTGGGTCATTATTCTCTG 57 53667459 53667477 AATATACTGCCGAGTCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mos ENSMUSG00000078365 ENSMUST00000105158 1 1 1 124 4 3798012 3798030 AGAACATCATCCAGAGCTG 59 3797906 3797924 TATCTCTACATCGGCTCGA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 A2A668_MOUSE ENSMUSG00000078695 ENSMUST00000107584,ENSMUST00000107585,ENSMUST00000107583 2 3 3 64 11 97547926 97549591 AAGAATCAGCCCTTCTGTG 59 97549619 97549637 AACTTGAGTGGAGAAAGGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 4933409K07Rik ENSMUSG00000078729 ENSMUST00000107997 1 1 1 117 4 42452377 42452659 GTTCTTGAATGACCTCAGAC 58 42422605 42422623 CTTTAGCCCTTTGTCTGAC 58 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Leng1 ENSMUSG00000078813 ENSMUST00000019878 2 1 1 60 7 3615303 3615321 GCAATAAAGAGCATGAGGA 57 3614604 3614622 CCTAGTGCTTTCTCTTGTC 57 NA DesignNoJunction Mus musculus 50 Q3V0T3_MOUSE ENSMUSG00000078846 ENSMUST00000108773 2 1 1 70 8 128042738 128042756 CTTCATGCTCCTTTGACAG 58 128042686 128042704 CCTTGTTCAAACACTTGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2ARR8_MOUSE ENSMUSG00000078869 ENSMUST00000108961 1 1 2 142 2 177051503 177051716 CAGCTATAGGTTACATTTGGGA 59 177050241 177050259 ACTCTCATTTGCAAAGGCT 59 NA Mus musculus 50 A2ART8_MOUSE ENSMUSG00000079103 ENSMUST00000110675,ENSMUST00000110676 3 2 2 80 2 120924128 120924148 AATTAGCACCAAGATGGTAGG 59 120922321 120924086 TCCTCAGAGGATCCTTCTG 59 NA Mus musculus 50 Capn3 ENSMUSG00000079110 ENSMUST00000110721,ENSMUST00000028749,ENSMUST00000110720 3 3 7 62 2 120289733 120289752 TCTATTCGGCCATCATTAGC 59 120289774 120289795 GCTCAAATGTCTTCTCTTTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Clec7a ENSMUSG00000079293 ENSMUST00000112076 1 1 1 80 6 129420960 129420978 AGTGGGTTTAGGAATCCTG 58 129419003 129420917 GAATTGTGTCCATACTCACC 58 NA Mus musculus 50 Arpc4 ENSMUSG00000079426 ENSMUST00000102708,ENSMUST00000032412 1 2 2 84 6 113334099 113334117 ATGCCATAAATTCATGCGC 59 113334164 113335495 GATGTCATATCCCTCCACAG 59 NA Mus musculus 50 St3gal6 ENSMUSG00000079552 ENSMUST00000023427 2 1 1 78 16 58507600 58507620 TCTCCTCACTACATTCTTCAG 58 58503341 58503359 GAACTGACTTGTCATTCCC 58 NA DesignNoJunction Mus musculus 50 Olfr360 ENSMUSG00000080247 ENSMUST00000116512,ENSMUST00000116511 1 2 2 60 2 36924045 36924064 AACAACCATCACTATTCCTC 57 36924086 36924105 GGAAATGCTCCGATTTACAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 NP_001098011.1 ENSMUSG00000080315 ENSMUST00000116664 2 1 1 60 17 18200272 18200290 GCAACCGTATTTAAATGGC 57 18200314 18200985 CAGGAAAGTGTTAAGCTGC 59 NA DesignRelaxed Mus musculus 50 Nalcn ENSMUSG00000000197 ENSMUST00000072254 3 1 2 140 14 123859645 123885620 CTACCTTGCAGAGGTTCTG 59 123859523 123859543 GACATAACTATCAGGAGGCTG 59 NA Mus musculus 50 Tspan32 ENSMUSG00000000244 ENSMUST00000009396,ENSMUST00000075172 2 2 7 174 7 150201493 150201511 GTTGTGGGAAGAAATCTCC 58 150203182 150203494 ATAGCATATACCGTGAGGG 57 NA Mus musculus 50 Arvcf ENSMUSG00000000325 ENSMUST00000115613,ENSMUST00000115618,ENSMUST00000090103,ENSMUST00000115614,ENSMUST00000115612,ENSMUST00000115610,ENSMUST00000115611 2 7 7 91 16 18399163 18399181 GAGAGCCTAACGAAGACTC 59 18399236 18399764 ATCTGAGCTCACATTCCTC 58 NA Mus musculus 50 Loxl3 ENSMUSG00000000693 ENSMUST00000000707 3 1 2 80 6 83000215 83000309 GTGTCAAGAGGATGTCTCC 59 83000353 83000371 TAGAGATCCCAACATCCCA 59 NA Mus musculus 50 Lsr ENSMUSG00000001247 ENSMUST00000098553 1 1 4 80 7 31744323 31750995 TGTCCTTGTTTATGCTGCT 59 31744261 31744279 GAGAGGTGGGTATAGATGC 58 NA Mus musculus 50 Hoxc6 ENSMUSG00000001661 ENSMUST00000001711 2 1 1 60 15 102840170 102840188 CTCAGAACCGGATCTACTC 58 102840211 102840230 GAACTGAACACGACATTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nfix ENSMUSG00000001911 ENSMUST00000109764,ENSMUST00000098572,ENSMUST00000063596 3 3 6 83 8 87240091 87240109 CTTCCTATGCCTGATTCCA 58 87237743 87240044 TGTCGTTGTGAATGAAGGT 59 NA Mus musculus 50 Tiam1 ENSMUSG00000002489 ENSMUST00000114124,ENSMUST00000002588 3 2 4 149 16 89858909 89860458 ATCAACCAGGTGTTTGGAG 59 89856195 89856213 ATGGACCCAAATGTCACAG 59 NA Mus musculus 50 Ccdc65 ENSMUSG00000003354 ENSMUST00000003444 2 1 3 84 15 98551143 98551161 CCTGAAGGTGAAGGATGAG 59 98551209 98551403 GATACCTATGGTCTCCTGC 58 NA Mus musculus 50 Dusp3 ENSMUSG00000003518 ENSMUST00000107172,ENSMUST00000107173,ENSMUST00000003612 3 3 3 102 11 101842949 101842968 CACAGATTTCATTGACCAGG 58 101836189 101836207 GAGGTAGGCGATAACTAGC 59 NA DesignNoJunction Mus musculus 50 Kpna6 ENSMUSG00000003731 ENSMUST00000102590,ENSMUST00000003828 3 2 2 80 4 129332194 129332689 AGATGTACAAGAACAGGCAG 59 129332133 129332154 CAATTCAAGACATAATCCCTGC 59 NA Mus musculus 50 Fancl ENSMUSG00000004018 ENSMUST00000004120 1 1 2 84 11 26368705 26368808 GCATTCATTTATGGGATCCAG 59 26368854 26368872 AAGATACTACGAGCTGGGA 59 NA Mus musculus 50 Chn2 ENSMUSG00000004633 ENSMUST00000046856 3 1 4 123 6 54170689 54223081 TGGAGAAGATCTCTTCACTG 58 54236107 54236125 CAGTATTCACACCAGTGTG 58 NA Mus musculus 50 Apoa2 ENSMUSG00000005681 ENSMUST00000111321,ENSMUST00000111320,ENSMUST00000111319,ENSMUST00000005824 1 4 4 81 1 173155862 173155880 AGCATGACTGATTATGGCA 59 173155925 173156287 TCTCAAAGTATGCCTTGGC 59 NA Mus musculus 50 Tnfrsf13b ENSMUSG00000010142 ENSMUST00000010286,ENSMUST00000101103,ENSMUST00000101104 2 3 3 179 11 60960406 60960424 TCTTCTGCTGTTTCTTGGT 59 60960965 60960983 AGAAGCTACACGTTTCCAC 59 NA DesignNoJunction Mus musculus 50 Phox2b ENSMUSG00000012520 ENSMUST00000012664 3 1 1 145 5 67488935 67488953 CTAGCACTGAAGATCGACC 59 67487755 67487773 GAGGAGTCAGACTTCTTCC 58 NA DesignNoJunction Mus musculus 50 Tmem27 ENSMUSG00000015401 ENSMUST00000112280,ENSMUST00000015545 3 2 3 99 X 160546363 160546384 GTCTGGATTATTGTATTCGGTG 58 160546444 160556138 CTTTGTTGTTCCTTCTGCG 59 NA Mus musculus 50 Egfl8 ENSMUSG00000015467 ENSMUST00000015611,ENSMUST00000097345 1 2 2 81 17 34751877 34751895 GTCCTATAGTCAACCGGTG 59 34751714 34751832 GTATGTGGTCCTGTAGGTG 59 NA Mus musculus 50 Odz1 ENSMUSG00000016150 ENSMUST00000115058,ENSMUST00000115061 2 2 4 83 X 39995979 40010645 TTTGGAACTAAGCACAAGC 58 39995914 39995933 TTGGTGTCTGATAGGTAGAG 57 NA Mus musculus 50 Col20a1 ENSMUSG00000016356 ENSMUST00000108856,ENSMUST00000108855,ENSMUST00000080705,ENSMUST00000108854,ENSMUST00000108852,ENSMUST00000094213 2 6 7 151 2 180735950 180735968 TGCTTCGTGATCTGATGTC 59 180737068 180738063 CATCAGGTCAAACCCTGAG 59 NA Mus musculus 50 Eya2 ENSMUSG00000017897 ENSMUST00000063422,ENSMUST00000103082,ENSMUST00000063433 3 3 4 159 2 165557082 165557103 AATCATTATCTTCCACTCCCTG 59 165580027 165587418 GATTTGGTCACAGTCCTCC 59 NA Mus musculus 50 Cyb5r3 ENSMUSG00000018042 ENSMUST00000018186 2 1 2 109 15 82989333 82989352 GAGAAAGATATCCTGTTGCG 58 82985140 82989261 CTATAGTCCCAGGCATCAG 58 NA Mus musculus 50 Mapt ENSMUSG00000018411 ENSMUST00000100347 2 1 10 114 11 104151300 104156182 GAATTACAGCCGAAGAAGC 58 104163696 104163714 TTCTCGTCATTTCCTGTCC 59 NA Mus musculus 50 Trip10 ENSMUSG00000019487 ENSMUST00000077277,ENSMUST00000019631 3 2 2 80 17 57401198 57401781 GACAATAAGGAGAGCAGCT 59 57401824 57401843 AAAGTCCTCATCGAACTCAG 59 NA Mus musculus 50 Adarb1 ENSMUSG00000020262 ENSMUST00000020496,ENSMUST00000105404,ENSMUST00000105405 2 3 6 136 10 76775226 76775244 ATTTCAGAAGTCAGAGCGG 59 76774005 76775126 GTCTATCTGCTGGTTCCTC 59 NA Mus musculus 50 Rnf130 ENSMUSG00000020376 ENSMUST00000054684,ENSMUST00000102776 1 2 2 80 11 49899303 49900887 AAGGGCGATAAGGAAACAG 59 49900931 49900949 CCGAACAACATCATTCTGC 59 NA Mus musculus 50 Rhbdf2 ENSMUSG00000020806 ENSMUST00000103028,ENSMUST00000103029,ENSMUST00000092408 3 3 3 177 11 116466473 116466569 CAAGATGCCCAAGATTGTG 59 116466314 116466332 AACAGATATCCTCTTGCGG 59 NA Mus musculus 50 Esr2 ENSMUSG00000021055 ENSMUST00000110421,ENSMUST00000101291,ENSMUST00000076634,ENSMUST00000110419 2 4 6 85 12 77224305 77234806 CTCAACTCCAGTATGTACCC 59 77224239 77224257 GTCACTGCGTTCAATAGGT 59 NA Mus musculus 50 Hnrpk ENSMUSG00000021546 ENSMUST00000043269,ENSMUST00000116404 2 2 4 60 13 58494583 58494601 AACACAGGACCAGATACAG 58 58493762 58494559 AGAATACTGCTTCACACTG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Dapk1 ENSMUSG00000021559 ENSMUST00000077453,ENSMUST00000044083 1 2 2 80 13 60850732 60852500 TTATTTGAACGGAGTTGGTG 58 60852541 60852561 GCAAAGTAGTCATAGCAACAG 59 NA Mus musculus 50 Arf4 ENSMUSG00000021877 ENSMUST00000112318,ENSMUST00000022429 3 2 2 81 14 27473437 27475390 CGAAACAGAACATGGTATGTC 59 27475433 27475451 CATTTGACAGCCAATCCAG 59 NA Mus musculus 50 Sqle ENSMUSG00000022351 ENSMUST00000022977,ENSMUST00000100640 1 2 2 80 15 59155274 59155371 CTTATGAAGGATGCACCAC 58 59155415 59155433 CTGGTAGATGAGAACTGGA 57 NA Mus musculus 50 Brd1 ENSMUSG00000022387 ENSMUST00000109381,ENSMUST00000023022 1 2 4 121 15 88537556 88537574 TTCTCCGAAACAAGCTGAG 59 88531690 88537471 AGAGTTAGCTCCTTCCTCC 59 NA Mus musculus 50 Srl ENSMUSG00000022519 ENSMUST00000023161 1 1 2 93 16 4493875 4496417 ATTGCTCAATGGGAAGAGG 59 4493800 4493818 TGTCCTCATTCAGCATCAG 59 NA Mus musculus 50 Mefv ENSMUSG00000022534 ENSMUST00000100222 2 1 2 86 16 3708088 3708553 CCTTCATTCATTGGGAGCA 59 3708020 3708038 CAAATCACGGTAACTGCAG 59 NA Mus musculus 50 Gcet2 ENSMUSG00000022659 ENSMUST00000023339 2 1 2 152 16 45610666 45616074 ACAACCAGATACTTCAGGG 58 45618953 45619948 ATTAGCATTGTCCTGAACG 57 NA Mus musculus 50 Nat13 ENSMUSG00000022698 ENSMUST00000063520,ENSMUST00000063542,ENSMUST00000023382,ENSMUST00000114661 1 4 5 80 16 44158048 44159585 CAATATCTATCTGCATGTCCAG 58 44159625 44159644 GTCTCGATAATCTCAAAGCC 58 NA Mus musculus 50 Rcan1 ENSMUSG00000022951 ENSMUST00000060005,ENSMUST00000023672 1 2 2 188 16 92397664 92400141 GGCCAAATTTGAATCCCTC 59 92396257 92397514 CCTATGTGTAAAGTCTGAGCA 59 NA Mus musculus 50 Vegfa ENSMUSG00000023951 ENSMUST00000071648,ENSMUST00000074629,ENSMUST00000024747,ENSMUST00000113520,ENSMUST00000113519 2 5 6 83 17 46161443 46161461 GATCAAACCTCACCAAAGC 59 46161029 46161396 CTGTCTTTCTTTGGTCTGC 58 NA Mus musculus 50 Pdpk1 ENSMUSG00000024122 ENSMUST00000102927,ENSMUST00000115407,ENSMUST00000115411,ENSMUST00000115408,ENSMUST00000052462 3 5 5 98 17 24238633 24238652 ATTTGATGAGACCTGTACCC 59 24237861 24238573 TCTGGTTTAAGGTCTCTGTG 58 NA Mus musculus 50 Prepl ENSMUSG00000024127 ENSMUST00000064592,ENSMUST00000072406 3 2 2 80 17 85480453 85480473 ACCTTAGTAGTTGTGAAGCTC 59 85477954 85480411 CTTCACCCATTCGAAACTG 58 NA Mus musculus 50 Elp2 ENSMUSG00000024271 ENSMUST00000115825 3 1 2 83 18 24770953 24770971 ATACCTTCAGACCTTGAGC 58 24771015 24775911 GTTCTAACACCATTAGTACCAG 58 NA Mus musculus 50 Eif4ebp3 ENSMUSG00000024483 ENSMUST00000115692 1 1 6 86 18 36740859 36743276 AACTAGCACAAGTACTACTAGC 59 36743323 36743341 TAGAAGCTGCCATCAAAGG 59 NA Mus musculus 50 Txnl4a ENSMUSG00000024571 ENSMUST00000025463 2 1 1 146 18 80406843 80406861 CTGTTTGGATATCCCAGCT 59 80408253 80408271 TGTTCATCAGGTCATCTGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Ms4a7 ENSMUSG00000024672 ENSMUST00000067532,ENSMUST00000056035,ENSMUST00000025574 2 3 3 80 19 11402532 11407706 AGTTCTTGGAACCATCCAG 59 11402470 11402489 TTGAAGTAGGAAGCTGACAC 59 NA Mus musculus 50 Zfand5 ENSMUSG00000024750 ENSMUST00000025659 3 1 1 63 19 21351051 21351069 AATAGTGGCAGAATGAGCC 59 21351487 21351506 CAGAATCTGAGGTAGGACTG 58 NA DesignNoJunction Mus musculus 50 Pitpnm1 ENSMUSG00000024851 ENSMUST00000049658,ENSMUST00000100022 2 2 2 80 19 4105452 4105471 GATGACCAAGTGGAATTCCA 59 4105514 4106573 ACTGTAGGATCTGGTACCC 59 NA Mus musculus 50 Gpr137 ENSMUSG00000024958 ENSMUST00000099782,ENSMUST00000099774,ENSMUST00000025909,ENSMUST00000099776 1 4 4 60 19 7013773 7013791 TAGATGCCTTCGATTACGA 57 7013611 7013629 AGGTCATTCACCAGATCTG 58 NA DesignNoJunction Mus musculus 50 Sorbs1 ENSMUSG00000025006 ENSMUST00000099467 3 1 5 80 19 40435987 40437703 AACTGAACAGAGACACTCC 58 40435925 40435944 AATTCTGCAGGATTTCTGGA 59 NA Mus musculus 50 5430427O19Rik ENSMUSG00000025058 ENSMUST00000113976,ENSMUST00000026038 1 2 2 60 X 83133931 83133952 CAAGTGTCTAAAGAGAAGAACC 58 83133972 83133991 GGTGGCTAATAACTATGTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ablim1 ENSMUSG00000025085 ENSMUST00000111558,ENSMUST00000036802,ENSMUST00000111544 3 3 15 109 19 57121556 57123964 TACAAACAGCATGATGCAG 58 57121465 57121483 GGTATCTCGTTGGGATCTG 59 NA Mus musculus 50 Itga7 ENSMUSG00000025348 ENSMUST00000073153,ENSMUST00000105228 2 2 5 179 10 128377980 128378505 CTATAACTGGAAGGGCACG 59 128378891 128378911 TCTGAGCTATCAATGTTGGTC 59 NA Mus musculus 50 Dnajc14 ENSMUSG00000025354 ENSMUST00000105231,ENSMUST00000026410 2 2 2 80 10 128251675 128251695 AACTACAAGATGACCTCAAGG 59 128251736 128253781 CCATTTCAAACCTCCTATGC 58 NA Mus musculus 50 Zfp142 ENSMUSG00000026135 ENSMUST00000113739,ENSMUST00000027315 1 2 5 80 1 74632005 74632024 AACATGGAGATCATTGTGGA 59 74626488 74631962 CTTTACCAGGACACCTGAG 59 NA Mus musculus 50 Obsl1 ENSMUSG00000026211 ENSMUST00000113567 1 1 5 136 1 75486160 75486178 CACATTCAATCAGAAGGCC 58 75485261 75486060 ATAGTCACTGGGACCTCTC 59 NA Mus musculus 50 Fmo4 ENSMUSG00000026692 ENSMUST00000111525,ENSMUST00000028014 1 2 2 80 1 164737703 164737723 CAGTATTTGACGCTGTTATGG 59 164735419 164737662 TATGGATTCCAGGAAAGGAC 58 NA Mus musculus 50 Slc25a25 ENSMUSG00000026819 ENSMUST00000113310,ENSMUST00000113305,ENSMUST00000113307,ENSMUST00000113308 3 4 6 118 2 32275932 32276839 GAGAAGATTCTTAAGAGCATGG 58 32275835 32275854 TTCCAGTACAGGATGATCTC 58 NA Mus musculus 50 Olfm1 ENSMUSG00000026833 ENSMUST00000028177,ENSMUST00000102879 1 2 5 283 2 28061519 28061537 TGATCACCAACTGGATGTC 59 28068063 28068084 CAAGACTTCTATGGATTGAGAC 58 NA DesignNoJunction Mus musculus 50 Dab2ip ENSMUSG00000026883 ENSMUST00000112997,ENSMUST00000112987,ENSMUST00000091010,ENSMUST00000112992,ENSMUST00000112980,ENSMUST00000095461,ENSMUST00000112989,ENSMUST00000112986,ENSMUST00000065001,ENSMUST00000028246,ENSMUST00000112983,ENSMUST00000112981,ENSMUST00000112982 3 13 13 88 2 35578735 35582956 ATCAGCAGGTTGATGTCAG 59 35583007 35583026 TCGATGATCTTCTGTTTGGA 58 NA Mus musculus 50 Lhx6 ENSMUSG00000026890 ENSMUST00000112960,ENSMUST00000112963,ENSMUST00000112961 2 3 7 81 2 35942981 35946490 ACATTGAGAGTCAGGTACAG 58 35942919 35942937 AAATCAGCTTTGAGGTGGA 59 NA Mus musculus 50 Neb ENSMUSG00000026950 ENSMUST00000075301,ENSMUST00000036934 1 2 6 80 2 52151810 52151829 ACAACTATAGCTACCCTCCT 59 52150909 52151767 TGTACTCCACATCACTCTG 58 NA Mus musculus 50 Abcb11 ENSMUSG00000027048 ENSMUST00000102709,ENSMUST00000102710 3 2 2 80 2 69115916 69120655 AGTTTAAGAGCTTCCATCCG 59 69115855 69115873 ATCACCTATAGCCAGTGGA 59 NA Mus musculus 50 Myef2 ENSMUSG00000027201 ENSMUST00000067780,ENSMUST00000110500 2 2 4 98 2 124924254 124924553 GAGTGAATAGAATTGGAGGAGG 59 124923803 124924195 GGTATAGCTCTCCCATTCG 59 NA Mus musculus 50 Galk2 ENSMUSG00000027207 ENSMUST00000028636,ENSMUST00000094604 2 2 3 88 2 125772721 125801004 ACTCAAGATGAACTCACCT 57 125801056 125801074 CATACCTGCTTAAACTGCA 57 NA Mus musculus 50 Mtap1a ENSMUSG00000027254 ENSMUST00000094639,ENSMUST00000110639 1 2 2 165 2 121133462 121133676 GAACCTTCAGGTGACTCTG 59 121133804 121133823 TCAGAACTCAATCTTGCAGG 59 NA Mus musculus 50 Spef1 ENSMUSG00000027329 ENSMUST00000028801,ENSMUST00000110218 1 2 2 161 2 131000321 131000339 GACCCAAGAGAAACCTCTC 59 130998505 130998939 TCAGCACCTTTCTGTTCAG 59 NA Mus musculus 50 a ENSMUSG00000027596 ENSMUST00000109697,ENSMUST00000029123,ENSMUST00000109696 1 3 3 60 2 154873419 154873440 CAAGAAATCCAAGAAGATCAGC 59 154873460 154873696 TTTCTTGGAAGACCTCTTCC 59 NA DesignNoJunction Mus musculus 50 a ENSMUSG00000027596 ENSMUST00000109697,ENSMUST00000029123,ENSMUST00000109696 3 3 3 103 2 154871482 154871500 TGAACTCGCTGGATTTCTC 59 154873460 154873696 TTTCTTGGAAGACCTCTTCC 59 NA DesignNoJunction Mus musculus 50 Samhd1 ENSMUSG00000027639 ENSMUST00000109550,ENSMUST00000057725,ENSMUST00000088523 3 3 5 124 2 156927588 156930580 CAATAAAGAGCAGGTGTCAC 58 156927483 156927501 CACACCACTGAACAAAGTG 59 NA Mus musculus 50 Spata5 ENSMUSG00000027722 ENSMUST00000108112,ENSMUST00000029277 2 2 2 135 3 37319422 37323454 GATGGCAAAGTTCCTAAGAC 58 37323552 37325023 AGGCTGTATAAACCTCCTG 58 NA Mus musculus 50 Ddx20 ENSMUSG00000027905 ENSMUST00000090680 1 1 2 80 3 105482626 105483277 CTTCTTCCTTTACCAGATCCT 58 105482566 105482584 CATGGCAGCTTTAACTTCC 59 NA Mus musculus 50 Gstcd ENSMUSG00000028018 ENSMUST00000029651,ENSMUST00000080583,ENSMUST00000070884 1 3 3 81 3 132668529 132668547 ATTGTGGATTTCTGCAGTG 58 132666744 132668358 CTATTAACGTAACCTGGCAC 58 NA Mus musculus 50 Pip5k1a ENSMUSG00000028126 ENSMUST00000107233,ENSMUST00000107236 2 2 3 63 3 94871330 94871348 GCTCCTGCTTTATATTGGC 58 94869764 94871306 CTCCAACTTCTTAACAAACCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Sdcbp ENSMUSG00000028249 ENSMUST00000029912,ENSMUST00000103008,ENSMUST00000108371,ENSMUST00000108374 1 4 4 83 4 6306120 6306138 CTGCTTATTCTGCCAATCC 58 6306183 6308145 GATACAGATTTCCATCTGGAG 57 NA Mus musculus 50 Mllt3 ENSMUSG00000028496 ENSMUST00000097995 2 1 5 122 4 87420046 87429566 GTGAATGTGACAAGATCGT 57 87419942 87419963 GGTAACTCTGTAATTTACGGAC 58 NA Mus musculus 50 Slc35d1 ENSMUSG00000028521 ENSMUST00000036195,ENSMUST00000072164,ENSMUST00000106846,ENSMUST00000094947 1 4 4 80 4 102885834 102886491 AAATGTACCTCGAAAGACGT 59 102885773 102885792 AGTTTCTTTGTGCTGAACAG 58 NA Mus musculus 50 Sgip1 ENSMUSG00000028524 ENSMUST00000097948,ENSMUST00000072481,ENSMUST00000102775,ENSMUST00000106882,ENSMUST00000080728,ENSMUST00000066824,ENSMUST00000106879,ENSMUST00000097946 3 8 9 93 4 102540276 102540294 ATGCAGAAATCGATTGGGA 59 102542408 102543166 TTTCCTTTGGTAGAGCCTG 59 NA Nonspecific Mus musculus 50 Slc6a9 ENSMUSG00000028542 ENSMUST00000063857,ENSMUST00000030269,ENSMUST00000102685 2 3 3 110 4 117536152 117536297 AAGTCTTCAGGGAAAGTGG 59 117536370 117536389 GTACATGATACCCGTGAAGG 59 NA Mus musculus 50 Pum1 ENSMUSG00000028580 ENSMUST00000030315,ENSMUST00000097863,ENSMUST00000097864,ENSMUST00000097862 3 4 6 82 4 130274104 130274122 TGAATCCAGCAAAGATGGA 58 130274167 130275096 CTGAATGATCTGATGTTCCC 58 NA Mus musculus 50 Hspg2 ENSMUSG00000028763 ENSMUST00000030547 2 1 2 80 4 137066571 137066825 ATGAACTCAACTGTGAGGA 58 137066869 137066887 AGAGTGGTAAAGGTGACAC 58 NA Mus musculus 50 Zcchc17 ENSMUSG00000028772 ENSMUST00000105995 3 1 2 133 4 130026561 130031392 CAAGGAGAGGTTGCTATGG 59 130015762 130015784 CCAACATCTACTATCTCAGAAGG 59 NA Mus musculus 50 Dnajc2 ENSMUSG00000029014 ENSMUST00000115193,ENSMUST00000115195,ENSMUST00000030771 1 3 4 80 5 21267407 21267425 GGTCAGAAGATGATCTGCA 59 21266531 21267364 CAATGACTTCCCATCTTGAG 58 NA Mus musculus 50 Mfn2 ENSMUSG00000029020 ENSMUST00000105716,ENSMUST00000030884,ENSMUST00000105715,ENSMUST00000105714 3 4 4 96 4 147257084 147257336 TTATAAGAACGAGCTGCAC 57 147257006 147257024 CATAGTCTGCAGTGAACTG 57 NA Mus musculus 50 Ugt2a2 ENSMUSG00000029268 ENSMUST00000031197 2 1 2 168 5 87894573 87915063 AAAGCTTTAGGAAGACCCA 58 87893198 87894444 CTTCCATTTCCTTAGGTAAAGG 58 NA Mus musculus 50 Asb15 ENSMUSG00000029685 ENSMUST00000031696,ENSMUST00000090534 1 2 2 82 6 24516479 24517130 AAGATAATCCGTTCTGTGAG 57 24517173 24517193 GTAATCTATCAGTATGCGGAC 57 NA Mus musculus 50 Cux1 ENSMUSG00000029705 ENSMUST00000065599 3 1 3 83 5 136732211 136732684 CAGCTCTGTTCTATGGACC 59 136732146 136732164 TGGAGATGATGGAAAGCAG 59 NA Mus musculus 50 Herc5 ENSMUSG00000029798 ENSMUST00000031817 2 1 2 85 6 57604450 57604468 TTGAAGAGATGACAGACCC 58 57604517 57608011 AAACTTGGGATTGACTGGA 58 NA Mus musculus 50 Clcn1 ENSMUSG00000029862 ENSMUST00000052456 2 1 3 94 6 42261241 42263248 CCTGAAGAGACTCATACACTC 59 42263304 42263322 TCTTCTAGTGCCAAGACAC 58 NA Mus musculus 50 Ephb6 ENSMUSG00000029869 ENSMUST00000031903 1 1 3 93 6 41567355 41567373 GTACTGGCTGTCATCTTCC 59 41567676 41567863 AATACTTCACTCCAAGTCCTG 59 NA Mus musculus 50 Grin2b ENSMUSG00000030209 ENSMUST00000111905,ENSMUST00000053880 1 2 2 80 6 135993960 135993980 TTCATTTCTGCTCAGACTCTC 59 135873480 135993918 GGACTCATCCTTATCTGCC 59 NA Mus musculus 50 Pira3 ENSMUSG00000030427 ENSMUST00000090689 1 1 4 118 7 3864720 3864738 AATGACCATCTGGTGTCAG 59 3864382 3864639 CATAGATTCCCTTGTTCCCA 59 NA Mus musculus 50 Sipa1l3 ENSMUSG00000030583 ENSMUST00000085811,ENSMUST00000085809 3 2 2 97 7 30162585 30162603 AAATCTTCTATGGCCGAGG 59 30156250 30162524 GGTCATCACCTTTAGCCTC 59 NA Mus musculus 50 Sipa1l3 ENSMUSG00000030583 ENSMUST00000085809 2 1 2 100 7 30163086 30168227 ATGTCTGCTATAGCATGGC 59 30163004 30163023 TCTGAAGACATCAGACTTGC 59 NA Mus musculus 50 Kif22 ENSMUSG00000030677 ENSMUST00000106320 1 1 2 120 7 134176238 134176256 TCAGAAAGAACTGCTAGGC 59 134174605 134176154 TAAGAGGCTGAGTTTCTGG 58 NA Mus musculus 50 Ccdc95 ENSMUSG00000030689 ENSMUST00000032928 1 1 2 105 7 134005055 134005231 GTTCCTCATTTACGAGCAC 58 134004785 134004804 CAGAAGTCGATCTAGAAGGA 57 NA Nonspecific Mus musculus 50 Mlstd2 ENSMUSG00000030759 ENSMUST00000033018,ENSMUST00000067929 3 2 2 112 7 120693561 120693579 ATTGGCAGAGTATGTTGTG 57 120693654 120694602 AGTTATCAATCCATCCTGGA 57 NA Mus musculus 50 Dhx32 ENSMUSG00000030986 ENSMUST00000033290,ENSMUST00000063669 1 2 2 278 7 140951137 140951155 CTTCATGGAGAGTCTGCTG 59 140934473 140940532 TCAGTACAGTACCTCAGGA 58 NA DesignRelaxed Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112408,ENSMUST00000112406,ENSMUST00000112402,ENSMUST00000112400 2 4 10 146 X 156896801 156899279 CAATGGTACACCAGATGCT 59 156903541 156903561 GAGTCATTGCAAAGAGATGAC 59 NA Mus musculus 50 Xlr4c ENSMUSG00000031362 ENSMUST00000114531,ENSMUST00000114530,ENSMUST00000068551 2 3 5 80 X 70479782 70479918 CTGAAGAAACTGTTCACGT 57 70479720 70479738 GTTACGAGAATAGCAGGGA 58 NA Mus musculus 50 Ap1s2 ENSMUSG00000031367 ENSMUST00000069041,ENSMUST00000033734,ENSMUST00000112294 3 3 3 80 X 160354449 160354468 CAATGAACTGATTACCCTGG 58 160354511 160355651 TCAAGTTCACATACACTGC 57 NA Mus musculus 50 Ppapdc1 ENSMUSG00000031570 ENSMUST00000068916 1 1 2 161 8 26832922 26832940 TTTGCTTCCTTCTACCTGG 59 26833065 26834562 AACTAGCACATCTTGCCAG 59 NA Mus musculus 50 Tcf12 ENSMUSG00000032228 ENSMUST00000034755,ENSMUST00000064957 1 2 3 94 9 71716079 71716817 GATGTCTGTGAGCAGTCTC 59 71716003 71716021 CTGGTAGAAGGTCCAACTG 59 NA Mus musculus 50 rp9 ENSMUSG00000032239 ENSMUST00000034763 2 1 2 91 9 22258223 22258243 AAGTTAGAACAGTTCCGAGTC 59 22253290 22254255 TGCTGGATCCTTACATCCT 59 NA Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113696,ENSMUST00000113701,ENSMUST00000113697,ENSMUST00000113689,ENSMUST00000050905,ENSMUST00000113684 1 6 16 118 9 66879308 66880280 AGGATAAGTACTCTCAGAAGGA 59 66878858 66878879 CTCCAATTTGGTTACTGATCTC 58 NA Mus musculus 50 2610101N10Rik ENSMUSG00000032407 ENSMUST00000078374 3 1 2 89 9 95396349 95402973 TCTTCAGATGCACATCCTC 59 95396278 95396297 CTTCTTACTTAGGGTTCGCT 59 NA Mus musculus 50 Jmjd2a ENSMUSG00000033326 ENSMUST00000097911,ENSMUST00000106406,ENSMUST00000106403,ENSMUST00000050288 2 4 4 85 4 117842633 117848168 ATAGCGACAAGTACTGCAC 59 117842566 117842584 GGGAGGATTGAATGTGAGG 59 NA Mus musculus 50 Cdc14a ENSMUSG00000033502 ENSMUST00000090464 3 1 2 81 3 116095792 116095812 GAAGATAGTGCACTACACCTC 59 116069616 116095749 GTAGATGACGGCATAAGCA 59 NA Mus musculus 50 Tubgcp5 ENSMUSG00000033790 ENSMUST00000032627,ENSMUST00000094359,ENSMUST00000068721,ENSMUST00000107577 3 4 4 96 7 63070414 63070432 CAGATCATAATGGCTGGCA 59 63070492 63071839 TTCTTTCTGCATCTCTGGC 59 NA Mus musculus 50 Zfp446 ENSMUSG00000033961 ENSMUST00000045810,ENSMUST00000108535,ENSMUST00000108536 3 3 5 80 7 13564926 13564945 GGGATAGATCGATCTACCCA 59 13564987 13565244 ACTTGGAGATACCATCTCCT 59 NA Mus musculus 50 Scaper ENSMUSG00000034007 ENSMUST00000037408 1 1 4 80 9 55712242 55712260 AGACAACAGGAATGGTGAC 59 55707713 55712198 CTTCTGCCATAGACCAGTC 59 NA Mus musculus 50 Polq ENSMUSG00000034206 ENSMUST00000039069,ENSMUST00000054034 3 2 4 81 16 37017369 37017388 GCTGTTTGCACTATTGAGAG 59 37017431 37022828 CCACCATTCCTAACAGATCC 59 NA Mus musculus 50 4732418C07Rik ENSMUSG00000034210 ENSMUST00000106522 1 1 4 99 4 115439104 115441224 TTCTAGCATCAAAGGCCAG 59 115441287 115441305 GAGTTCAGTTCCTAGCGTC 59 NA Mus musculus 50 Fhod3 ENSMUSG00000034295 ENSMUST00000037097,ENSMUST00000115820,ENSMUST00000091991,ENSMUST00000115819 2 4 4 80 18 25056190 25062399 GAAGCAGATATTTCAGGATGAC 58 25062440 25062458 CCCACTTTGATCAAACAGG 58 NA Mus musculus 50 Rsrc1 ENSMUSG00000034544 ENSMUST00000065074,ENSMUST00000046542,ENSMUST00000065047,ENSMUST00000065115 3 4 4 160 3 66984774 67010353 GATTAGAACATCTGCCTCCA 59 67153838 67153856 GACTTGTTCTACCAGGGTG 59 NA Mus musculus 50 Zfyve9 ENSMUSG00000034557 ENSMUST00000106657,ENSMUST00000106658,ENSMUST00000106660,ENSMUST00000042185 2 4 4 80 4 108347156 108350329 ATGAATCTTCTAGCAGACTTCC 59 108347097 108347116 TCGAACTTCCATATCAACCA 58 NA Mus musculus 50 Crb2 ENSMUSG00000035403 ENSMUST00000050372 2 1 1 61 2 37643257 37643275 ATGGTTTCCAGTGCTACTG 59 37645652 37645673 ATCCATATCTTCCTGACATGTC 59 NA DesignNoJunction Mus musculus 50 Hmha1 ENSMUSG00000035697 ENSMUST00000099501,ENSMUST00000105373,ENSMUST00000043311 1 3 3 106 10 79489941 79490292 ATGTGAAGAGTGCTGTCTG 59 79490362 79490380 AGTCTTGTCCAAAGAGCTG 59 NA Mus musculus 50 Ptprq ENSMUSG00000035916 ENSMUST00000050702 2 1 2 80 10 107081305 107083626 CACAGACCAAGACATACCT 58 107081243 107081261 CAGCTCACGTTTATTGCAG 59 NA Mus musculus 50 Bbs9 ENSMUSG00000035919 ENSMUST00000115296 1 1 2 84 9 22450441 22450462 TGTACCTGAAGAGAAACTACAC 59 22450507 22452476 TCAGGATTTCGATCTGTCG 59 NA Mus musculus 50 Zfp57 ENSMUSG00000036036 ENSMUST00000069250,ENSMUST00000089968 1 2 2 81 17 37143073 37143091 ACTTCTACACAGAAGACCC 58 37143136 37146378 GTTTCTTCTTGCTTCCGAC 59 NA Mus musculus 50 Oxsr1 ENSMUSG00000036737 ENSMUST00000040853,ENSMUST00000111715 1 2 2 80 9 119193717 119193735 AACCATTGCTACAATCCTC 57 119182094 119193674 TTCACATCTCTGTGAATCTG 57 NA Mus musculus 50 Oxsr1 ENSMUSG00000036737 ENSMUST00000040853 2 1 2 89 9 119203630 119213930 AGCTCCTGAAAGAAATCCAG 59 119203560 119203578 ACAGCTCATCCTTTACCAC 59 NA Mus musculus 50 BC037112 ENSMUSG00000037210 ENSMUST00000042234 1 1 2 89 5 34762731 34762749 CAGACCATGACCTCATCAG 59 34762802 34763448 CTCTGCTGAGATGTCTCTG 59 NA Mus musculus 50 Arid5a ENSMUSG00000037447 ENSMUST00000115032,ENSMUST00000097778,ENSMUST00000115030 2 3 8 80 1 36374102 36374121 CCTCTACAAGTTCATGAAGG 57 36374164 36374467 TTCCACAGGTTAATCTGCT 58 NA Mus musculus 50 1110007C09Rik ENSMUSG00000037960 ENSMUST00000048946 3 1 1 140 13 49303382 49303401 AGATCCTTACCAACAAGGAG 58 49300603 49300621 CATGGATGTACAGAGCTCG 59 NA DesignNoJunction Mus musculus 50 D530005L17Rik ENSMUSG00000038070 ENSMUST00000047023,ENSMUST00000102819 2 2 3 85 4 84593473 84593491 AATCTGAAGCCAAAGACAG 57 84593540 84602191 TACAGATTCAGTCTGCTCC 58 NA Mus musculus 50 Snx25 ENSMUSG00000038291 ENSMUST00000110378,ENSMUST00000041582 3 2 2 80 8 47188911 47188930 TACGAGGACTTTATCAAGCT 58 47165628 47188871 CTCCACTACAATTTGATACCTG 58 NA Mus musculus 50 Fbxo25 ENSMUSG00000038365 ENSMUST00000098917 2 1 2 80 8 13929432 13931195 GTGACAAAGGTAAACACTGG 58 13931238 13931256 ATCTGAGAAACGGTACAGG 58 NA Mus musculus 50 Herc1 ENSMUSG00000038664 ENSMUST00000042824,ENSMUST00000098618 3 2 4 80 9 66345132 66345401 AGAATATCAACCAGAGGACG 58 66345441 66345462 GTCTGATGCATTTAGCTTTACC 59 NA Mus musculus 50 Rtel1 ENSMUSG00000038685 ENSMUST00000048608 2 1 7 97 2 181089744 181089762 TGTCTGAAGGTGTAGACAG 58 181089823 181090366 CATGCCAAATCCTTTGGAG 59 NA Mus musculus 50 Ralgps1 ENSMUSG00000038831 ENSMUST00000113165,ENSMUST00000042615,ENSMUST00000113167,ENSMUST00000091039,ENSMUST00000113162 1 5 6 80 2 33116047 33116065 AGACAACTACAAGCGAACC 59 33030056 33116007 AGAAGGTAGATTCCTAGATAGGG 59 NA Mus musculus 50 Tbc1d2 ENSMUSG00000039813 ENSMUST00000084621,ENSMUST00000107750 2 2 4 132 4 46650598 46658996 CAAACTAGAGCAAGAGGAG 57 46650484 46650502 TAGGGAGATGTTCTGAAGG 57 NA Mus musculus 50 Clstn1 ENSMUSG00000039953 ENSMUST00000084120,ENSMUST00000105691 3 2 3 98 4 148988274 149001332 CTTTGCAGGTGAGATTTGTG 59 149001393 149001411 GACCGGATTATTCCCTCAC 59 NA Mus musculus 50 Nxph4 ENSMUSG00000040258 ENSMUST00000095266,ENSMUST00000059904 1 2 2 68 10 126963667 126963685 ATGTGAACGGTACCTTCAG 59 126963617 126963635 TACTGACGCTTAGGTTACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Plekha1 ENSMUSG00000040268 ENSMUST00000075181 2 1 3 87 7 138051926 138053106 GGTCATCCTCTTCTATGCG 59 138054360 138054378 GAATTTGGGTTCTGAAGGC 59 NA Mus musculus 50 Btnl9 ENSMUSG00000040283 ENSMUST00000046522 2 1 2 93 11 48989190 48992226 CAGATTGCAGATGTGTTCC 58 48989115 48989133 TGAGCACAATCAGACTGAG 59 NA Mus musculus 50 Cacng5 ENSMUSG00000040373 ENSMUST00000106742,ENSMUST00000039071 1 2 2 66 11 107742913 107742932 GGCATCTTCTTTATCCTCTC 57 107739310 107739328 TGATGCTGGAGATGTACAG 58 NA DesignNoJunction Mus musculus 50 Gyltl1b ENSMUSG00000040434 ENSMUST00000068586,ENSMUST00000090582,ENSMUST00000043868,ENSMUST00000111284 1 4 4 80 2 92205832 92205850 TTATGATCCTCGCTTTGTG 57 92205639 92205789 AGGAATTCATATTCCTGAGC 57 NA Mus musculus 50 Nup88 ENSMUSG00000040667 ENSMUST00000108530 1 1 3 184 11 70758465 70758718 CCAGCATTTCTCAAATCATCTG 59 70758196 70758216 AGATCTTCGAGTTGTTTCCTC 59 NA Mus musculus 50 Ttc3 ENSMUSG00000040785 ENSMUST00000113875 1 1 4 80 16 94605606 94605628 GTATCTGTACTCCTGACTTTACC 59 94605667 94606403 CAGATGTCATATTCACGCCT 59 NA Mus musculus 50 Mbp ENSMUSG00000041607 ENSMUST00000062446,ENSMUST00000114681,ENSMUST00000114674,ENSMUST00000102812,ENSMUST00000075372 2 5 10 101 18 82742311 82744574 AGAACATTGTGACACCTCG 59 82748365 82748385 ATTTATAGTCGGAAGCTCTGC 59 NA Mus musculus 50 Myo3b ENSMUSG00000042064 ENSMUST00000060208,ENSMUST00000100044,ENSMUST00000112243 3 3 5 80 2 70124988 70125006 GAGGTGATTCGACATCCAG 59 70125050 70127441 GTCCATCAGAGAATACCGG 59 NA Mus musculus 50 Ankrd47 ENSMUSG00000042099 ENSMUST00000048560 1 1 2 81 17 33955498 33955516 AAGATGGTATTCCAGGTGC 59 33955560 33955753 CTCTCATACTCTCCGTTGAG 58 NA Mus musculus 50 Nxt2 ENSMUSG00000042271 ENSMUST00000112916,ENSMUST00000042329,ENSMUST00000112914,ENSMUST00000112913 1 4 4 95 X 138671464 138672199 AGTTCATGAGCAAGCTACC 59 138672258 138672276 TGGTTAAAGAAGTGCTGCT 59 NA Mus musculus 50 Sestd1 ENSMUSG00000042272 ENSMUST00000102660,ENSMUST00000044107,ENSMUST00000102659 2 3 3 80 2 77026605 77026624 GAGGAAATTGAAGCAATTGG 57 77025305 77026562 ATATTGTTCAGTTCCGTCG 57 NA Mus musculus 50 Nek10 ENSMUSG00000042567 ENSMUST00000112631,ENSMUST00000112630,ENSMUST00000063220 1 3 3 80 14 15698179 15698198 GAAGAGGATTGTTCACAGAG 57 15698240 15717576 CCAAAGTCAGTAACTGTCAC 58 NA Mus musculus 50 Il17re ENSMUSG00000043088 ENSMUST00000058548,ENSMUST00000062146,ENSMUST00000101065,ENSMUST00000053569 1 4 5 82 6 113418938 113419028 CTTGTGTCCTGATGTCTCC 59 113419074 113419092 GAACTACACCCACTAGAGC 59 NA Mus musculus 50 Gprasp1 ENSMUSG00000043384 ENSMUST00000113147,ENSMUST00000113145,ENSMUST00000113144,ENSMUST00000070053,ENSMUST00000057164 1 5 5 109 X 132332145 132332164 ACTGTCTCAAATCTCTGGAG 58 132332394 132332570 AAAGCAGGACAATCTCCAG 59 NA InUTR Mus musculus 50 Sorcs1 ENSMUSG00000043531 ENSMUST00000076049,ENSMUST00000072685,ENSMUST00000111756 1 3 3 80 19 50255939 50255959 TACTATCACAGTCCAAGTCTC 58 50250649 50255899 GACCGAAATTCCTCATATACC 57 NA Mus musculus 50 Cage1 ENSMUSG00000044566 ENSMUST00000110233,ENSMUST00000074969 1 2 3 84 13 38103280 38104274 GCCTGATAAATAAGGTAACGTC 58 38103217 38103235 TGTGCAATCTGAGAATGTG 58 NA Mus musculus 50 Cyb5d1 ENSMUSG00000044795 ENSMUST00000108660 2 1 2 204 11 69208301 69208319 TTGCATGAGATACCGTACC 59 69207288 69208133 TATTTCCATGTGTAGCTGC 57 NA DesignRelaxed Mus musculus 50 2410002F23Rik ENSMUSG00000045411 ENSMUST00000055858,ENSMUST00000107948,ENSMUST00000084937 3 3 6 131 7 51503651 51504915 CATCATCTTACTGTGGTGG 57 51505679 51505698 AGGATGTTTGTAGAAACCAC 57 NA Nonspecific, InUTR Mus musculus 50 1810044A24Rik ENSMUSG00000047921 ENSMUST00000089770,ENSMUST00000063060 1 2 3 80 15 72888402 72888420 GGACAAGATCCCTCTTCTC 58 72882726 72888360 TTCTTGTAGTGTCTGCTATCC 59 NA Mus musculus 50 Arid4a ENSMUSG00000048118 ENSMUST00000058026,ENSMUST00000046305,ENSMUST00000082246 3 3 3 87 12 72138100 72138118 TTGATGACGGTGATGAGAG 59 72138170 72138269 CTGATCCAGAGTCTCACTC 58 NA Mus musculus 50 Mex3d ENSMUSG00000048696 ENSMUST00000105350,ENSMUST00000099480,ENSMUST00000062946 3 3 3 82 10 79844951 79844969 GGAAGAGATTGAGGCTCAC 59 79844887 79844905 TACCATTGGCATGGAAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 D4Bwg0951e ENSMUSG00000048706 ENSMUST00000055922 2 1 1 60 4 80599773 80599791 ATCATAGAGGACTCACAGG 57 80599814 80599833 AGCAGTAGTACTCAGAATCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ivl ENSMUSG00000049128 ENSMUST00000053107 3 1 2 60 3 92375468 92375486 AACAGATAGAGCGTGAAGG 59 92375426 92375445 TCTTGCTTAAGTGACTGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Evc2 ENSMUSG00000050248 ENSMUST00000056365,ENSMUST00000101258 2 2 2 81 5 37754824 37754842 TTCCCTCAATGACCAAGTG 59 37754886 37761772 GATCTCCAACTCTTCTAGGG 58 NA Mus musculus 50 Olfr630 ENSMUSG00000050281 ENSMUST00000052826,ENSMUST00000106880 1 2 2 60 7 110903606 110903627 GATAATTCCACTTATAGCCCGT 59 110903567 110903585 AGAAAGAACATGAGAGCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mafg ENSMUSG00000051510 ENSMUST00000058162,ENSMUST00000106182,ENSMUST00000106181,ENSMUST00000106180 3 4 4 136 11 120491137 120491156 CAATAAAGGAAACAAGGCCT 58 120490939 120490957 TGATCTCTTCCTTGGAGAG 57 NA DesignNoJunction Mus musculus 50 Ccnb3 ENSMUSG00000051592 ENSMUST00000115753 1 1 3 80 X 6582467 6586957 CCATCATTGAGGAGATAACCA 59 6582407 6582426 TCAATAATGGATCTTGGCCT 58 NA Mus musculus 50 C430048L16Rik ENSMUSG00000052137 ENSMUST00000063839,ENSMUST00000095143 3 2 2 85 4 12019683 12019702 ACAGAATAAACAGGTCTCCA 58 12020292 12020310 TAAACGGATGACTACAGCC 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Bmpr1b ENSMUSG00000052430 ENSMUST00000029948,ENSMUST00000106232,ENSMUST00000098568,ENSMUST00000106230 2 4 4 80 3 141505972 141508053 TGTGTTTCTGGAGGTATAGTG 59 141505912 141505931 CATGTCCTCATAAGAAGGGT 58 NA Mus musculus 50 Nav2 ENSMUSG00000052512 ENSMUST00000064383 1 1 5 131 7 56219807 56617482 GAGGATCTACACGGATTGG 59 56617576 56627696 TTGTCATTTGCTACAACCTG 58 NA Mus musculus 50 Mettl7a ENSMUSG00000054619 ENSMUST00000108962,ENSMUST00000067752 3 2 2 76 15 100135343 100135361 GAACCTTCTAGGCTTGTGG 59 100135401 100135419 TGTACATCACGGAGAATCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 D730040F13Rik ENSMUSG00000055296 ENSMUST00000068792 2 1 2 94 4 56912290 56916797 TTCTTTCGATCCTGGAGTC 58 56912214 56912232 GTAGAAGAGGATGGTCAGC 59 NA Mus musculus 50 Mta3 ENSMUSG00000055817 ENSMUST00000112349 3 1 6 93 17 84181295 84181313 TACTGACAGATACGTGCAG 58 84183669 84188270 ATTTGGTTTGCTGTAAGTCG 59 NA Mus musculus 50 Tmem69 ENSMUSG00000055900 ENSMUST00000106477,ENSMUST00000106478,ENSMUST00000069674 2 3 3 88 4 116226329 116227385 AGCATCTTCAAAGATGCTG 58 116226259 116226277 GCAGTAGACATGTCTTGAG 57 NA Mus musculus 50 Fry ENSMUSG00000056602 ENSMUST00000045502,ENSMUST00000087204 3 2 3 81 5 151172082 151172102 TCTCTACAGATTACTGTGGGT 59 151172145 151172717 GATGGTTATGAGTCGGCTC 59 NA Mus musculus 50 Dtnbp1 ENSMUSG00000057531 ENSMUST00000110128 3 1 2 85 13 45018652 45048549 CCTTCAAAGAGCCTATGGG 59 45018585 45018603 GTCTGAGATGTCCATCAGG 59 NA Mus musculus 50 Mamld1 ENSMUSG00000059401 ENSMUST00000082088,ENSMUST00000114629 3 2 2 87 X 68354743 68354762 GCTTGTAATCGAGAACATGC 59 68354812 68370667 CTTACTGGTTCCCGATTCC 59 NA Mus musculus 50 Arrb2 ENSMUSG00000060216 ENSMUST00000079056,ENSMUST00000108568,ENSMUST00000102564,ENSMUST00000084954,ENSMUST00000102563 3 5 5 80 11 70253396 70253673 ATTCGATACCAACTATGCCA 58 70253715 70253734 TCATCCTTCATTCCCTTCAG 59 NA Mus musculus 50 Tsga10 ENSMUSG00000060771 ENSMUST00000114903,ENSMUST00000088072 3 2 5 80 1 37858618 37858636 CTTATCACTGCTGAAGCAG 58 37820346 37858574 ATTCTCCATTTGCTCAACC 57 NA Mus musculus 50 Galnt13 ENSMUSG00000060988 ENSMUST00000112636,ENSMUST00000112635,ENSMUST00000112634,ENSMUST00000068595 3 4 4 85 2 54585553 54707021 TGAGATTAGAAGGATGCAAGAC 59 54707065 54707085 CCAAGCTTCATTATGGAACAC 59 NA Mus musculus 50 Tnnt3 ENSMUSG00000061723 ENSMUST00000105949,ENSMUST00000105948,ENSMUST00000105944 2 3 20 195 7 149689962 149691430 AAGAGGAAGAGGAAGTCCA 59 149697249 149697268 TTAAGTGCGATTAGCTCCTC 59 NA Mus musculus 50 Slc22a12 ENSMUSG00000061742 ENSMUST00000113452,ENSMUST00000071115,ENSMUST00000113451 3 3 3 86 19 6538789 6540337 TTATTCATGGTGGCTACCAG 59 6538722 6538740 GCTACCCTCTGTAGTTCCT 59 NA Mus musculus 50 Abpd ENSMUSG00000061795 ENSMUST00000079849 2 1 1 213 7 34150769 34150787 CATGTCTTCCTTTCTTCGA 57 34149582 34149601 TAGTATGACAGGCATTCAGG 58 NA DesignNoJunction Mus musculus 50 Eno1 ENSMUSG00000063524 ENSMUST00000080926,ENSMUST00000051986,ENSMUST00000080149 3 3 3 106 4 149619435 149620685 AGAACAAAGAAGCACTGGA 59 149620755 149620773 AGACCTGTAGAACTCGGAG 59 NA Nonspecific Mus musculus 50 Defcr24 ENSMUSG00000064213 ENSMUST00000080533 3 1 1 116 8 22845761 22845779 ATTGTAGAGCAAGAGGCTG 59 22845859 22845877 GTCATCTTGTCCTCTGTGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Siva1 ENSMUSG00000064326 ENSMUST00000021728,ENSMUST00000109755 3 2 2 171 12 113886073 113886091 CATGAGATCTGTGGATGGG 59 113887224 113887242 TTCAAACATAGCACAGCTG 58 NA DesignNoJunction Mus musculus 50 Hmgb1 ENSMUSG00000066551 ENSMUST00000085546,ENSMUST00000110505,ENSMUST00000093196 2 3 3 60 5 149861331 149861349 AGCCCTATGAGAAGAAAGC 59 149860476 149861308 TAGGCAGCAATATCCTTCTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Wdr35 ENSMUSG00000066643 ENSMUST00000111113 2 1 2 82 12 8996830 8996849 CATTTCTATCACCACGTGTG 58 8996894 9002890 AAAGGACAAGCACAAACTG 58 NA Mus musculus 50 Cenpm ENSMUSG00000068101 ENSMUST00000089157 3 1 2 131 15 82070376 82071765 CAAATACAGTCTCCAGAAAGTG 58 82069772 82069790 ATAACTGTGTTCTGGTGGA 58 NA Mus musculus 50 Olfr1513 ENSMUSG00000068385 ENSMUST00000111545,ENSMUST00000089739 2 2 2 71 14 52969633 52969651 GAGGACATTCCTGTTTGTG 58 52969580 52969599 ATCAGGATGATCATGTTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Scyl2 ENSMUSG00000069539 ENSMUST00000105294 1 1 2 120 10 89108288 89108430 GGAAGTCAGATTGATAAGGTC 57 89104837 89104855 CTTCAAGTGTTAGTGACCC 57 NA Mus musculus 50 Scyl2 ENSMUSG00000069539 ENSMUST00000092227 3 1 2 81 10 89129505 89129526 CAATATCTCCAGACATCAAGGA 59 89125194 89129464 GACAATCCTTCAGAAACCTG 58 NA Mus musculus 50 MGI:1919424 ENSMUSG00000073126 ENSMUST00000110824,ENSMUST00000035694 2 2 3 68 12 33833334 33833352 AAAGCAGGGAGGTTATGAG 58 33902593 33902612 CATCATGTGCTGGATAATGG 58 NA DesignNoJunction Mus musculus 50 Hoxb2 ENSMUSG00000075588 ENSMUST00000100523 2 1 1 64 11 96213136 96213154 ATTTGAGAGGGAGATTGGG 58 96213182 96213200 GGAAGGAAGTCAGACACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV17-121 ENSMUSG00000076514 ENSMUST00000103315 1 1 1 93 6 67987077 67987095 AAAGTCACCATCAGATGCA 59 67987151 67987170 AAATAAGGAGCTTAGGAGGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 A2BH25_MOUSE ENSMUSG00000078753 ENSMUST00000108087 1 1 1 61 7 34529159 34529177 GACAAGACACATGCAACTG 59 34529988 34530006 AAACATCAACATGCTGGTC 58 NA DesignNoJunction, InUTR Mus musculus 50 A2ANU6_MOUSE ENSMUSG00000079009 ENSMUST00000109926,ENSMUST00000109929 3 2 2 101 2 150016228 150016246 GAGACCTACAGGAATCTCG 58 150016510 150017604 ACTTCTTTCATGCCTTCCA 59 NA Nonspecific Mus musculus 50 A2AMP4_MOUSE ENSMUSG00000079483 ENSMUST00000113635 2 1 2 138 X 99045164 99045183 GGAGGATGATGAAGAATTGC 58 99271529 99271547 GTTAAACAACGAGTGTCGA 57 NA DesignNoJunction Mus musculus 50 Xlr4a ENSMUSG00000079845 ENSMUST00000114534,ENSMUST00000078775 1 2 2 60 X 70326116 70326820 TAACCCAGGAAACAATCTGG 59 70326075 70326093 TGTTCCATGGGAAGAACTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 A2A4S5_MOUSE ENSMUSG00000078274 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Pih1d2 ENSMUSG00000000167 ENSMUST00000000171 2 1 1 86 9 50427976 50429061 GGCATCAGATGCTTATACCA 59 50429109 50429128 TGATCTTTGATCCCTTGGTC 59 NA Mus musculus 50 Tspan32 ENSMUSG00000000244 ENSMUST00000009396 3 1 7 152 7 150191053 150191073 GATACTGATCACCAACTTCCT 59 150191915 150192822 ACATAGAAGGCCCAATAGC 59 NA Mus musculus 50 Myf5 ENSMUSG00000000435 ENSMUST00000000445 2 1 1 119 10 106921258 106921712 TGTATCAAATGCATGTGCTG 59 106921158 106921176 GAAGCTGTGTCCTGAAGAG 59 NA Mus musculus 50 Dlg3 ENSMUSG00000000881 ENSMUST00000087984,ENSMUST00000113736,ENSMUST00000000901,ENSMUST00000113735 2 4 4 80 X 98008101 98008680 TGACACGACAAGAAATTCAC 58 98008723 98008741 AGATGAGGTCATCGTTGAC 59 NA Mus musculus 50 Esam1 ENSMUSG00000001946 ENSMUST00000002011 3 1 1 139 9 37339136 37339154 TAGAGGGAGAAGAAGTGGT 58 37339256 37341752 AATGTAAGACAACACCTGGT 59 NA Mus musculus 50 Ap4e1 ENSMUSG00000001998 ENSMUST00000002063,ENSMUST00000110394,ENSMUST00000110393,ENSMUST00000110392 1 4 4 80 2 126840021 126845031 AAAGAGTGGGTTATTTGGC 57 126845074 126845093 TTACCACTGTATTCACAAGG 57 NA Mus musculus 50 Pex6 ENSMUSG00000002763 ENSMUST00000002840 1 1 2 80 17 46860912 46860932 GATGAACTGGATTCCTTAGCT 59 46860974 46861355 GAGCTGAGACACAACTCTG 59 NA Mus musculus 50 Rabac1 ENSMUSG00000003380 ENSMUST00000050267 2 1 2 247 7 25757615 25757633 TTTACAGCGGTTCTATCCA 58 25757168 25757189 ATAATACTCCGTTGCGTACC 59 NA DesignRelaxed, InUTR Mus musculus 50 Stat3 ENSMUSG00000004040 ENSMUST00000103114,ENSMUST00000092671,ENSMUST00000103113 2 3 3 80 11 100764820 100764928 TTAATGAAGAGTGCCTTCGT 59 100764759 100764778 ACCAGTCTTGATGACTAAGG 58 NA Mus musculus 50 Clcn3 ENSMUSG00000004319 ENSMUST00000093490,ENSMUST00000056508,ENSMUST00000110302,ENSMUST00000110301,ENSMUST00000004430,ENSMUST00000110300 1 6 6 81 8 63398344 63401595 TTGCAATAGAAAGTGCCAG 58 63398281 63398299 AGAGATGGAGTATGCTGTG 58 NA Mus musculus 50 Polr2e ENSMUSG00000004667 ENSMUST00000004786 3 1 2 174 10 79499934 79499953 ATCAATATCACAGAGCACGA 58 79499328 79499511 GGATGATCTTCACGACCTG 59 NA Mus musculus 50 Slc1a2 ENSMUSG00000005089 ENSMUST00000080210,ENSMUST00000111206,ENSMUST00000111204,ENSMUST00000111213,ENSMUST00000111212,ENSMUST00000005220,ENSMUST00000111211 3 7 7 81 2 102588737 102596069 TGATCATGATCATGTGGTACTC 59 102596110 102596129 ACTTCTAAGTCCTTGATGGC 59 NA Mus musculus 50 Man2b1 ENSMUSG00000005142 ENSMUST00000034121 3 1 1 80 8 87620942 87621307 TGACAAATACTGGTCCCAC 59 87621349 87621369 GTATTTCCATAGGCTTCAGTG 58 NA Mus musculus 50 Ndor1 ENSMUSG00000006471 ENSMUST00000114349,ENSMUST00000100329,ENSMUST00000114342,ENSMUST00000006640 3 4 4 96 2 25105383 25105401 CTGTGATCACCAACCAGAG 59 25105038 25105323 GCAGCAAAGCTGATATTGG 59 NA Mus musculus 50 Mid1ip1 ENSMUSG00000008035 ENSMUST00000115524,ENSMUST00000008179 1 2 2 60 X 10295362 10295383 CAAATCTGCGACACATATAACC 59 10295404 10295422 CAATGAAGCGATTCATGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxw9 ENSMUSG00000008167 ENSMUST00000095220 1 1 1 119 8 87590402 87590500 TAAATGGGATCTGTGCTGAG 59 87590582 87590600 TACCAACATCCATCCACAG 58 NA InUTR Mus musculus 50 Oit3 ENSMUSG00000009654 ENSMUST00000009798 2 1 1 125 10 58901385 58901403 TTCAAAGGAAACTGCTGTC 58 58900555 58901296 GTCATAGAAATGGCCACAG 58 NA Mus musculus 50 Pou6f2 ENSMUSG00000009734 ENSMUST00000041343 1 1 2 93 13 18243945 18264254 AAGGACAGATTATTGGGACC 59 18243871 18243889 ATAGGCTGTACTTGAAGGC 59 NA Mus musculus 50 Slc3a2 ENSMUSG00000010095 ENSMUST00000010239 2 1 1 120 19 8784092 8784216 GGAAAGCTGATGAATGCAC 59 8783851 8783869 TGTTGACAATTTGCTGCAG 59 NA Mus musculus 50 Psmb1 ENSMUSG00000014769 ENSMUST00000014913 3 1 1 113 17 15631466 15631484 TGTATTGGCAATTGCTGGA 59 15630135 15631390 TTGTCTGTCAGTTTGTAGCA 59 NA Mus musculus 50 Lta4h ENSMUSG00000015889 ENSMUST00000016033 2 1 1 80 10 92945067 92945715 ATACGATTCAGATGGTTACG 57 92945758 92945776 TTCAGTTGCCATCTTTAGG 57 NA Mus musculus 50 Mrps18c ENSMUSG00000016833 ENSMUST00000016977 1 1 2 93 5 101232121 101232998 ACATAACAGGTCTTTGTGG 57 101233357 101233375 TCCTTGTATGTAACTGGCA 58 NA Mus musculus 50 Sfrs6 ENSMUSG00000016921 ENSMUST00000017065 2 1 1 80 2 162759585 162759968 GGCAGTAGATCCAGATCAC 59 162760010 162760030 GATACTTCGAGATCTACTGCG 59 NA Mus musculus 50 Gsdma2 ENSMUSG00000017211 ENSMUST00000093938,ENSMUST00000017355 2 2 2 115 11 98518601 98518834 AACTGAAGCTGGTTGAGAG 59 98518912 98518931 TGTTAGAATCTGGTCCTCCT 59 NA Mus musculus 50 Erbb3 ENSMUSG00000018166 ENSMUST00000082059 1 1 1 80 10 128021480 128022076 AGCTTACTGAGATTCTGTTAGG 59 128021421 128021440 CCCTCCAGTCAATTGTATCC 59 NA Mus musculus 50 Ccdc49 ENSMUSG00000018541 ENSMUST00000018685 3 1 2 81 11 97614072 97614542 ATATGGCTTACAGGTGAGG 58 97614009 97614027 ATTGTTCTTTATCGCCCTC 57 NA Mus musculus 50 Myh11 ENSMUSG00000018830 ENSMUST00000090287,ENSMUST00000077248,ENSMUST00000115792 1 3 3 80 16 14269253 14269271 AAGAAGAGGCATGAGATGC 59 14256595 14269210 GTCTTCACGATCTTGTAGCA 59 NA Mus musculus 50 Lims1 ENSMUSG00000019920 ENSMUST00000020078,ENSMUST00000020077,ENSMUST00000105468 3 3 3 80 10 57876802 57879391 CACTATAATCAGCTGTTTGGTG 59 57881148 57881166 CTTGTTGAGAGCAGAGACC 59 NA Mus musculus 50 1200002N14Rik ENSMUSG00000020057 ENSMUST00000020249 3 1 1 98 10 87799725 87803274 CAACTTCCAGGAGTTAGCC 59 87799645 87799663 GAGATGATCGATTGCAGGA 59 NA Mus musculus 50 Rab21 ENSMUSG00000020132 ENSMUST00000020343 1 1 1 83 10 114732006 114732493 AGCAGAATCGTATGCAGAG 59 114731941 114731959 AGAAAGAGCTCCTCAATGC 59 NA Mus musculus 50 Xpo1 ENSMUSG00000020290 ENSMUST00000020538,ENSMUST00000109551,ENSMUST00000109548,ENSMUST00000102870,ENSMUST00000102869 3 5 5 81 11 23187438 23189763 ATGATCCTCAGATGGTAGCT 59 23189807 23189825 GCTGGTACATTTCTCTGGT 59 NA Mus musculus 50 Zfp354a ENSMUSG00000020364 ENSMUST00000020628,ENSMUST00000102766 1 2 5 87 11 50873583 50873602 CATCTTCACCCATCTTTGGA 59 50873652 50874375 AATGTCAACGACACCTGAG 59 NA InUTR Mus musculus 50 Guk1 ENSMUSG00000020444 ENSMUST00000108788 2 1 2 100 11 58999932 59000283 CGTGTCTCATACTACAAGGA 58 58999851 58999869 CAACACTCATTAGCTGGTG 58 NA DesignRelaxed, InUTR Mus musculus 50 Prpsap2 ENSMUSG00000020528 ENSMUST00000004955 3 1 1 203 11 61554474 61554493 ATAGGAATGCAGTCATCGTG 59 61548572 61550427 GAATCAGCATCGGGATCTC 59 NA DesignRelaxed Mus musculus 50 BC029169 ENSMUSG00000020614 ENSMUST00000020938 3 1 1 80 11 109544220 109545960 GCTCACAGATTGTGAAACC 59 109544158 109544176 GTTTGAACATGGCTTTCCC 59 NA Mus musculus 50 Cct6b ENSMUSG00000020698 ENSMUST00000021040,ENSMUST00000100722 2 2 2 82 11 82567232 82568474 TACTAACAGAGGCTGTGGT 59 82567168 82567188 CACAATTTCCACCATGAAGAG 59 NA Mus musculus 50 Slc25a19 ENSMUSG00000020744 ENSMUST00000021089,ENSMUST00000106503 3 2 3 74 11 115485513 115485531 CATCAAGATCCGTTTCCAG 58 115485286 115485304 AAGATTCCGTGGTATTTGG 57 NA DesignNoJunction Mus musculus 50 Lsm12 ENSMUSG00000020922 ENSMUST00000021297 2 1 1 116 11 102028503 102044182 ATGTTAGTAAGCTTGCCAG 57 102028405 102028423 TGTGAATGGTCTGGAAGAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Sec23a ENSMUSG00000020986 ENSMUST00000021375 1 1 1 80 12 60098175 60098193 CTGTACCACAAGGAAAGAG 57 60093261 60098131 GGAAAGTACACTCAAGCAG 58 NA Mus musculus 50 Ppp2r3c ENSMUSG00000021022 ENSMUST00000021410 3 1 1 80 12 56399449 56399467 ACGAGAGGAATCTAGAGCT 59 56398867 56399406 AACCATAAGTTCTGCAACTC 58 NA Mus musculus 50 Fos ENSMUSG00000021250 ENSMUST00000021674 1 1 1 110 12 86816128 86816551 GTAGAGCAGCTATCTCCTG 58 86816625 86816643 GAGTGTATCTGTCAGCTCC 59 NA Mus musculus 50 Tnfaip2 ENSMUSG00000021281 ENSMUST00000021710,ENSMUST00000102745 3 2 2 84 12 112687530 112687984 CTGTTCTTCTGGACTTCCG 59 112688032 112688050 TGAGGTCTTTCAAAGGCTC 59 NA Nonspecific Mus musculus 50 Prl7b1 ENSMUSG00000021347 ENSMUST00000080595 2 1 1 103 13 27698064 27698775 ACGCAGGATATTTCTATCCA 58 27696442 27696460 AACTGTTGAGACCATTGAC 57 NA Mus musculus 50 1300014I06Rik ENSMUSG00000021411 ENSMUST00000053459,ENSMUST00000021847 1 2 2 80 13 34730926 34730944 CATGACATAGAGACCAGGC 59 34730140 34730883 AGACCTGGAATACTTACACG 58 NA Mus musculus 50 Peci ENSMUSG00000021417 ENSMUST00000021854,ENSMUST00000110251 2 2 2 80 13 35079384 35079403 GACTAACTTCACTAGTGCCA 59 35078042 35079342 CTGTTTACAAAGTCCCTCAG 58 NA Mus musculus 50 1700001L19Rik ENSMUSG00000021534 ENSMUST00000022007 3 1 1 97 13 68750147 68751718 ATGAGGAGGAACAAGAAAGG 59 68751777 68751796 GCCATAGTCTCTGTTTAGGG 59 NA Mus musculus 50 Golm1 ENSMUSG00000021556 ENSMUST00000095739,ENSMUST00000022039 3 2 2 80 13 59746577 59750935 CTCCTATGACCTGAACCAG 58 59746515 59746533 CTGATGACCTCCTCTATCC 57 NA Mus musculus 50 Opn4 ENSMUSG00000021799 ENSMUST00000022331 1 1 1 86 14 35410600 35410618 CTCATGTCAGTCACTCAGG 59 35410378 35410550 ATAGAACTCGCAACCTGTC 59 NA Mus musculus 50 Bmp4 ENSMUSG00000021835 ENSMUST00000074077,ENSMUST00000100676 2 2 2 91 14 47004377 47005398 ATCACGAAGAACATCTGGAG 59 47004305 47004323 CTCATTCTCTGGGATGCTG 59 NA Mus musculus 50 Dph3 ENSMUSG00000021905 ENSMUST00000067955,ENSMUST00000022461 2 2 3 134 14 32898157 32898604 ATCACCAAGGAAGATTTGGA 58 32896382 32896400 CTCCTTGTTGGTTGAAGGT 59 NA DesignNoJunction Mus musculus 50 Epb4.9 ENSMUSG00000022099 ENSMUST00000022695,ENSMUST00000110984,ENSMUST00000022694 2 3 3 80 14 71013155 71013174 GAAGAGGAAGACGATGACTC 59 71012572 71013113 GGAAGTAACCTTACTGAGCT 58 NA Mus musculus 50 Wdr23 ENSMUSG00000022214 ENSMUST00000072530 2 1 1 80 14 56184368 56184483 GTACTCTTCAGATCGAGTCTC 59 56184525 56184543 CAGAGAACAGGATTTGGGA 58 NA Mus musculus 50 Grhl2 ENSMUSG00000022286 ENSMUST00000022895,ENSMUST00000110353,ENSMUST00000049749 2 3 3 80 15 37200525 37204404 CTATGACTACTACAAGGTTCCTC 59 37204444 37204462 TTATCCTGGTCTTCTTGGC 58 NA Mus musculus 50 Slc38a2 ENSMUSG00000022462 ENSMUST00000023099 2 1 1 80 15 96524063 96525456 AAGATACAAATGGGTTGTGG 58 96524002 96524021 GTGACAATGGAAGAATGAGG 58 NA Mus musculus 50 Pmm2 ENSMUSG00000022711 ENSMUST00000023396 1 1 1 80 16 8642928 8645465 AACTGGGAAATGATGTGGT 59 8645507 8645527 ATAGCTTCCCATCTTTGTACG 59 NA Mus musculus 50 1110004E09Rik ENSMUSG00000022972 ENSMUST00000023694 3 1 1 109 16 90931316 90931334 AAGAGCTGAAACTGAAGGA 58 90930215 90931243 TTTCTCATTTGGAGCTTGC 58 NA Mus musculus 50 Tlm ENSMUSG00000023737 ENSMUST00000067136 2 1 1 98 8 107186909 107186929 TCCTTCTCTAATCAACAGAGG 58 107186989 107187535 GCCAACCATTGAACAAGAG 59 NA Mus musculus 50 Glp1r ENSMUSG00000024027 ENSMUST00000114574 1 1 1 82 17 31068208 31068227 AGAACTCTCCTTCACTTCCT 59 31069597 31073225 GAAACTCCATCTGGACCTC 59 NA Mus musculus 50 Dusp1 ENSMUSG00000024190 ENSMUST00000025025 3 1 1 94 17 26643993 26644012 CTACCAGTACAAGAGCATCC 59 26643584 26643939 CCTTGATGGAGTCTATGAAGTC 59 NA Mus musculus 50 Tap2 ENSMUSG00000024339 ENSMUST00000025197 2 1 1 126 17 34349194 34349212 AGGTGCTGATTCTGAACTG 59 34349301 34350976 TACATGTAAACCAGGTTCCG 59 NA Mus musculus 50 Centd3 ENSMUSG00000024451 ENSMUST00000042944,ENSMUST00000115603 1 2 2 89 18 38141670 38141688 CAAACGCTTCTTTCGAGAG 59 38141053 38141617 TTCTTCTGGGAAAGCTCTG 59 NA Mus musculus 50 C330018D20Rik ENSMUSG00000024592 ENSMUST00000025488 1 1 1 102 18 57118230 57122069 ACCTTATTCACAAAGGCCC 59 57117545 57117563 GAAGTGTGATGTCCACCTC 59 NA Mus musculus 50 Slc12a2 ENSMUSG00000024597 ENSMUST00000115366 3 1 1 82 18 58063897 58064002 GATCTTGCAGATCCTCAGTC 59 58064044 58064065 GCAATTCCTATGTAAACCACTG 59 NA Mus musculus 50 Fbn2 ENSMUSG00000024598 ENSMUST00000025497,ENSMUST00000058192 1 2 2 80 18 58195548 58195569 CTTTCGGATCTTATGAATGCAC 59 58195047 58195508 ACTCGTCCAGATCTTTACAC 59 NA Mus musculus 50 Zp1 ENSMUSG00000024734 ENSMUST00000025641 3 1 1 80 19 10993098 10993205 GCTGGATTCTGTAGGTACC 59 10993036 10993055 CTTCCATTTACCATGCATGG 59 NA Mus musculus 50 Cabp4 ENSMUSG00000024842 ENSMUST00000025761 1 1 1 86 19 4137162 4137180 TGATAAGCCCAAAGCTGAG 59 4136249 4137112 TGTCCTTGTCAAACTCTCG 59 NA Mus musculus 50 Yif1a ENSMUSG00000024875 ENSMUST00000025811 1 1 1 130 19 5091415 5091548 ATTCAGCAAAGGTTCTCCC 59 5091642 5091660 AAGGTACTCAGTTCACTGC 59 NA Mus musculus 50 Trim8 ENSMUSG00000025034 ENSMUST00000026008 2 1 1 140 19 46587822 46588953 CTTCATGAAGAACACCAAGTC 59 46589192 46589210 AACTGCTTCTCCTTCTTGG 59 NA Mus musculus 50 6330577E15Rik ENSMUSG00000025066 ENSMUST00000099353,ENSMUST00000099354,ENSMUST00000099352 2 3 3 92 19 47808394 47809326 GAATAAAGAACGACGTGACTG 59 47809380 47809398 ACATGATAGACTGCAGCTC 59 NA Mus musculus 50 Sirt7 ENSMUSG00000025138 ENSMUST00000080202,ENSMUST00000106184 2 2 3 125 11 120482058 120482077 GATACCATTGTGCACTTTGG 59 120481810 120481972 CTTTAGTACCTTCAAGCTGGA 59 NA Mus musculus 50 Rfng ENSMUSG00000025158 ENSMUST00000026156 3 1 1 103 11 120644390 120644408 CTTCTCTTCCAACCAGGAC 59 120644016 120644324 ATTTCACTGTGTTTGAGGTG 58 NA Mus musculus 50 Parp6 ENSMUSG00000025237 ENSMUST00000026267,ENSMUST00000050483 3 2 2 81 9 59484477 59484495 AAGAAGAATTATGAGCGGC 57 59484540 59485456 TTTCCAAATATGAGCCCTG 57 NA Mus musculus 50 ORF34 ENSMUSG00000025262 ENSMUST00000073364 1 1 1 80 X 147834281 147834300 GTTAGTTCCATCAAAGACCC 58 147834342 147863474 GTCTTCTGTCCTAGACTGAG 58 NA Mus musculus 50 Atp10a ENSMUSG00000025324 ENSMUST00000055764 2 1 1 82 7 65995694 65995712 CATCGAGACTGCTAACCTG 59 65995758 66029334 ATTCAGAAACAAGCTCCGA 59 NA Mus musculus 50 Taldo1 ENSMUSG00000025503 ENSMUST00000026576 3 1 1 171 7 148582022 148582040 TACCAAGAGCTGGTAGAGG 59 148584496 148586200 TATCAAAGGAAAGCCTTGCA 59 NA Nonspecific Mus musculus 50 Apool ENSMUSG00000025525 ENSMUST00000113415,ENSMUST00000026599,ENSMUST00000113414 1 3 3 80 X 109478114 109478132 AACATTCAGTGTCTTTGCC 58 109478175 109485817 TGAACTGTGTAGTACCTGAG 58 NA Nonspecific Mus musculus 50 Satl1 ENSMUSG00000025527 ENSMUST00000026601 1 1 1 80 X 109498232 109498993 GAAGCTAAGTCAGATAGCCA 58 109498171 109498190 TCAACAGAATCCTGATTCCA 58 NA Mus musculus 50 Asl ENSMUSG00000025533 ENSMUST00000026610 3 1 1 81 5 130488575 130488593 GTTTGAAGTGTCTGACACC 58 130487986 130488530 GTTCTCACGATGAATCTGC 58 NA Mus musculus 50 Mdh1b ENSMUSG00000025963 ENSMUST00000114094,ENSMUST00000027104 3 2 2 94 1 63768194 63768389 ATGCCCAGCTTTACTATGG 59 63768118 63768136 CTGTTGTTCTGTATGCGTC 58 NA Mus musculus 50 Ndufb3 ENSMUSG00000026032 ENSMUST00000027193 2 1 1 109 1 58648002 58648020 CCAGATTACAGACAGTGGA 58 58648093 58652510 TATCTCCAAGCCTCATTGC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Ptma ENSMUSG00000026238 ENSMUST00000045897 3 1 1 133 1 88426077 88426095 AAGAAGAGGAAGAAGGTGG 58 88426370 88426548 ATCGTCATCCTCATCATCC 58 NA Nonspecific Mus musculus 50 Ptprc ENSMUSG00000026395 ENSMUST00000074797,ENSMUST00000027645,ENSMUST00000112038,ENSMUST00000081416,ENSMUST00000112036,ENSMUST00000112035 1 6 6 60 1 139961180 139961199 AATAAAGCCCAGGAAGACAG 59 139961139 139961157 CCTCAGCACTATTGGTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pfkfb2 ENSMUSG00000026409 ENSMUST00000066863 1 1 1 85 1 132596611 132596629 GCAACATCCTCGTTATCTC 57 132595814 132596562 GTATGGTAACTCATCTGCG 57 NA Mus musculus 50 Astn1 ENSMUSG00000026587 ENSMUST00000046110 2 1 1 80 1 160530576 160530594 TTCTTTGGCTACAACAACC 58 160530638 160532083 AGCAAAGTTGTTCTGTCTG 58 NA Mus musculus 50 Mosc1 ENSMUSG00000026621 ENSMUST00000110992,ENSMUST00000048462 3 2 2 85 1 186611715 186619125 AAACACTGAAGAGCTACCG 59 186611648 186611666 CAGAGCGAAGTATTGTCCA 59 NA Mus musculus 50 Serpinc1 ENSMUSG00000026715 ENSMUST00000064725 2 1 1 89 1 162923662 162923680 AAATCCCTCACCTTCAACG 59 162923733 162925457 CGGATTCTCCTTGAAGTCC 59 NA Mus musculus 50 Caprin1 ENSMUSG00000027184 ENSMUST00000028607,ENSMUST00000111147,ENSMUST00000111146 2 3 3 80 2 103612871 103612889 AAGTAAACCTTTGCACAGC 58 103611988 103612828 GCATTCATATTGAACACCGT 58 NA Mus musculus 50 D230010M03Rik ENSMUSG00000027243 ENSMUST00000090608,ENSMUST00000111323,ENSMUST00000111322 1 3 3 60 2 91552710 91552729 CACTTTCCAGTTGATGAAGC 59 91552751 91552770 CTGCCAATCCATAGAATTCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Itpka ENSMUSG00000027296 ENSMUST00000028758 3 1 1 81 2 119575244 119575262 TACTTGCAGTTACAGGACC 58 119575307 119575419 CCAGGTAAGTTCTGACACC 59 NA Mus musculus 50 Snx5 ENSMUSG00000027423 ENSMUST00000028909,ENSMUST00000110030 3 2 2 80 2 144086509 144086528 GGCAACATGAAGACTTTGTG 59 144084902 144086467 GAGCAGGAGGGATAATAAGG 59 NA Mus musculus 50 Gss ENSMUSG00000027610 ENSMUST00000079691 3 1 1 80 2 155398879 155398897 TGATTGCTCAAGAGAAGGA 58 155398724 155398835 TGACATGGATCTTCCTGTC 58 NA Mus musculus 50 Skil ENSMUSG00000027660 ENSMUST00000029194 1 1 1 87 3 31010571 31010589 TTGCCATCATGGTATCCTG 59 31010640 31012343 TGTACAGGTAGTAGCTGGG 59 NA Mus musculus 50 Arl14 ENSMUSG00000027783 ENSMUST00000029354 1 1 1 61 3 69026486 69026504 CACATTCTTCTCCTCGGAC 59 69026528 69026547 AACTTTAACCGGTAAAGCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Wnt2b ENSMUSG00000027840 ENSMUST00000029429 1 1 1 79 3 104753936 104753954 TACTGTGTCTTGGACAAGG 58 104750064 104750084 CCATCTGTTCCTTTAGAAGTC 58 NA DesignNoJunction Mus musculus 50 Gdap2 ENSMUSG00000027865 ENSMUST00000029459,ENSMUST00000106997 2 2 2 80 3 99974947 99981770 TCAGAAACTCAAAGGTTGC 58 99981814 99981832 GTGTGAATGATGAACCGAG 58 NA Mus musculus 50 Lrat ENSMUSG00000028003 ENSMUST00000029632 3 1 1 60 3 82707131 82707149 ACACTTTGTGACTTACTGC 57 82701045 82707108 ATAGAACTTCTCAGCCTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ash1l ENSMUSG00000028053 ENSMUST00000090933 2 1 1 81 3 88874498 88874519 CTATGAGATCATTCCCTTGGAG 59 88874561 88876378 TTTGGGTCTCCCTTTACAG 58 NA Mus musculus 50 Pear1 ENSMUSG00000028073 ENSMUST00000090981,ENSMUST00000029714,ENSMUST00000079083 2 3 4 84 3 87555860 87556042 TTACGTCATGCCAGATGTC 59 87555794 87555814 GTTAGGAGAACACTGAGACAG 59 NA Mus musculus 50 Ppp3ca ENSMUSG00000028161 ENSMUST00000056758,ENSMUST00000070198 2 2 3 94 3 136531674 136539056 GGTACTTCAGTATCGAATGTG 58 136539112 136539130 CCTACATTCATGGTTTCCG 58 NA Mus musculus 50 1700003M02Rik ENSMUSG00000028294 ENSMUST00000029971,ENSMUST00000108136,ENSMUST00000084732 3 3 3 80 4 34670041 34672079 AACTATACAAGTCGAGAGGAC 58 34669981 34670001 GATTTCTCTGCTAACAATGCC 59 NA Mus musculus 50 Jmjd2c ENSMUSG00000028397 ENSMUST00000077851,ENSMUST00000030102,ENSMUST00000102835 3 3 3 82 4 73989447 73991356 TACTACAAGCCTGATAGCA 57 73991401 73991420 TTTCTTCCAGATTGAACCAC 58 NA Mus musculus 50 Aqp7 ENSMUSG00000028427 ENSMUST00000116345,ENSMUST00000030136 2 2 3 83 4 40983163 40992325 CTATGTCATGATGGTGTTTGG 59 40983100 40983118 AAGTTGACACCGAGATAGC 59 NA Mus musculus 50 Ubap2 ENSMUSG00000028433 ENSMUST00000108068,ENSMUST00000030143,ENSMUST00000108066,ENSMUST00000108067 2 4 4 80 4 41156597 41158751 CTCCTCAGAGTTTGTCATCC 59 41156536 41156554 GGGAGTTGGAGATGTTCAC 59 NA Mus musculus 50 Cntfr ENSMUSG00000028444 ENSMUST00000102962,ENSMUST00000102961 2 2 4 82 4 41610285 41610303 GGTCTCCATAAGTGTCAGC 59 41609156 41610239 GATCAGGCTTCACAATGGT 59 NA Mus musculus 50 2610528J11Rik ENSMUSG00000028536 ENSMUST00000106367,ENSMUST00000030261 2 2 2 126 4 118201908 118202095 GAAACACAACCATCATCTCAG 59 118202183 118202201 ATGAGAATGGAGAGGACCA 59 NA Mus musculus 50 Mycbp ENSMUSG00000028647 ENSMUST00000030400 2 1 2 102 4 123587121 123587139 CAGAAATAGAGCTGCTTCG 58 123587204 123588349 TCATACTGAACAAGCTTTGC 58 NA Mus musculus 50 Sult1b1 ENSMUSG00000029269 ENSMUST00000031199 1 1 1 80 5 87964005 87964025 GAAAGGATTGAAGAGTTCCAG 58 87963038 87963964 ACTAAGCCAAGTAGTACCTG 58 NA Mus musculus 50 Smr2 ENSMUSG00000029281 ENSMUST00000087043 3 1 4 118 5 88517261 88537554 TGTTTCCTGTCTAGTGAGTG 58 88537635 88537653 TGTACACGATTGGGATCAG 59 NA Mus musculus 50 Cdc7 ENSMUSG00000029283 ENSMUST00000076467 3 1 3 148 5 107402905 107402923 TATCATGGAGTCGTTGGAC 58 107403034 107404517 GATTGCTTGATGAGCTTTCC 59 NA Mus musculus 50 Cdc7 ENSMUSG00000029283 ENSMUST00000031219 1 1 3 99 5 107403625 107403643 ATCTGTAGGCCTTTCTGTC 58 107403704 107403936 GAAATGTTCTTTCTCTGCAGG 59 NA Mus musculus 50 Tesc ENSMUSG00000029359 ENSMUST00000031304 3 1 1 150 5 118504899 118504917 TATCATGTCCTACTTCCGG 57 118506436 118506554 CTCCACCACATTTCTATACTC 57 NA Mus musculus 50 Mmp17 ENSMUSG00000029436 ENSMUST00000031390 2 1 1 101 5 130100944 130101283 GAACCTTTCTTGGAGGGTC 59 130101347 130101366 ATGTCACTCCAGACTTTGAG 59 NA Mus musculus 50 Pus1 ENSMUSG00000029507 ENSMUST00000031481,ENSMUST00000112426,ENSMUST00000086643,ENSMUST00000031483,ENSMUST00000100906 1 5 5 86 5 111204614 111204632 TATCCCTAAAGGTGTGGCT 59 111204224 111204564 TCTTCAATCCCAGAATCCG 59 NA Mus musculus 50 Tes ENSMUSG00000029552 ENSMUST00000115467,ENSMUST00000070685,ENSMUST00000076654 1 3 3 80 6 17049849 17049867 AGAATGGGAAGCTGTACTG 58 17049910 17050291 TGAATATCAGCTCGTCACAG 59 NA Mus musculus 50 Usp12 ENSMUSG00000029640 ENSMUST00000085614,ENSMUST00000031645 3 2 2 188 5 147563346 147563478 ACTGCTTAAGAGGGTTCAG 58 147551973 147551993 GATAAGAAAGCTTCGTGTACC 58 NA Mus musculus 50 Fbxo24 ENSMUSG00000029719 ENSMUST00000031732 3 1 1 133 5 138060130 138060825 CTCTATATCACGGGTGGGA 59 138060015 138060033 AAGAGATCACGATACACCC 58 NA DesignRelaxed Mus musculus 50 Mepce ENSMUSG00000029726 ENSMUST00000031740 3 1 1 152 5 138224363 138224382 CTACTGCAAGAGAAAGTCTC 57 138223712 138223840 CCTCTGGAGGTGTTATTCG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Mcm7 ENSMUSG00000029730 ENSMUST00000000505 1 1 1 80 5 138609339 138609357 AGATGACAAAGAGTGACGA 58 138609192 138609295 AATCCTCCTCTGCAATCTG 59 NA Mus musculus 50 Bmp10 ENSMUSG00000030046 ENSMUST00000032125 1 1 1 63 6 87379344 87383559 GAGCTTCAAGAACGAACTG 58 87383586 87383604 GAGAGGATATTTCCGGAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gsg1 ENSMUSG00000030206 ENSMUST00000111911,ENSMUST00000111910,ENSMUST00000087729 3 3 3 96 6 135194112 135194130 GCTATCCTGTGAGGAAACC 59 135192175 135192193 CAGTAGTCCTTTCTCACCT 57 NA DesignNoJunction Mus musculus 50 Pik3c2g ENSMUSG00000030228 ENSMUST00000111868 2 1 2 60 6 139845360 139848804 GCTCTCCCAGAATTTCCTC 59 139848826 139848846 TTCTCTTGTGATCTGAGTCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Bcat1 ENSMUSG00000030268 ENSMUST00000111742,ENSMUST00000116504,ENSMUST00000032402,ENSMUST00000087468 1 4 4 80 6 144952924 144952942 CTGCATATTCCAACGATGG 58 144948816 144952883 CCTTCCATACTGGATATCAGTC 59 NA Mus musculus 50 Cd27 ENSMUSG00000030336 ENSMUST00000116533 3 1 3 155 6 125182866 125182919 TACAAACACAGGACCACAC 59 125182729 125182748 CAGAGAAGACAGAACCAAGG 59 NA Nonspecific, InUTR Mus musculus 50 C230052I12Rik ENSMUSG00000030493 ENSMUST00000032704,ENSMUST00000108048 2 2 2 90 7 36180052 36180071 TTTACTGTGCTAGACCTTGG 59 36178098 36179999 TTTGCTCTTGAACCAAGTG 58 NA Mus musculus 50 Lrrc28 ENSMUSG00000030556 ENSMUST00000053950,ENSMUST00000085184 3 2 3 81 7 74674519 74674540 CATGTTTACCTTCGTCTATCCT 59 74660052 74674478 AATACTTGTCCTCCTCTGGT 59 NA Mus musculus 50 Itgam ENSMUSG00000030786 ENSMUST00000098015,ENSMUST00000106242,ENSMUST00000064821,ENSMUST00000106240 1 4 4 80 7 135229179 135229455 TTACCTGGGTTATGCTTCTG 59 135229498 135229516 ATATGCTGATACCGAGGTG 58 NA Mus musculus 50 Fgfr2 ENSMUSG00000030849 ENSMUST00000033138,ENSMUST00000106209,ENSMUST00000068807,ENSMUST00000106208 2 4 4 80 7 137307628 137311227 CAACCAATGAGGAATACTTGG 58 137307568 137307586 AACAAGAGCTCCTTGTGTC 59 NA Mus musculus 50 Dctd ENSMUSG00000031562 ENSMUST00000098773 2 1 2 228 8 49197349 49197367 AACAAGATTGTTGGGATCG 58 49222713 49223535 CATCTGCCTGGATGATGAG 59 NA DesignNoJunction Mus musculus 50 6430548M08Rik ENSMUSG00000031824 ENSMUST00000034281,ENSMUST00000108948,ENSMUST00000108951,ENSMUST00000108950 3 4 4 82 8 122674044 122675215 GTAGTGCTGTTTGAATGCC 59 122675259 122675279 AGATGGTAGTAAGTGAAGCAC 59 NA Mus musculus 50 1600029D21Rik ENSMUSG00000032068 ENSMUST00000034572 3 1 2 183 9 50307390 50309181 TAAAGTCAACCTGCAGGTC 59 50309921 50309939 ATAAATCCTTGGGCCAGAG 59 NA Mus musculus 50 Stoml1 ENSMUSG00000032333 ENSMUST00000034883 2 1 1 106 9 58108810 58109460 CCTTACTACAGGACAAGGC 59 58109530 58109548 GTTCTTTGCTCAACAAGGC 59 NA Mus musculus 50 Itgbl1 ENSMUSG00000032925 ENSMUST00000100289 3 1 3 163 14 124227113 124239795 CAATGCAGGTACATGTCAC 58 124245675 124245693 CATGGCAAGAACATTCACC 59 NA Mus musculus 50 Terf2ip ENSMUSG00000033430 ENSMUST00000052138 3 1 1 275 8 114536040 114539252 GAGAGCCACAGAACAAGAG 59 114541868 114541886 TCACCTTAATGGCAGTTCC 59 NA DesignNoJunction Mus musculus 50 Fgg ENSMUSG00000033860 ENSMUST00000048486 1 1 1 80 3 82818165 82818186 TAATTCCCTTCAACAGACTCTC 59 82818227 82818772 TTTAAACGTCTCCAGCCTG 59 NA Mus musculus 50 Bmp2k ENSMUSG00000034663 ENSMUST00000035635,ENSMUST00000112974 2 2 2 83 5 97474112 97474130 AGGTTGCTATCTGTGATGG 59 97474177 97482124 GCATGAACCTAATCAAGCA 58 NA Mus musculus 50 Sidt2 ENSMUSG00000034908 ENSMUST00000114573,ENSMUST00000038488 3 2 2 81 9 45760988 45761217 TTCGAGGACTATATCAGCG 58 45760925 45760943 TCAGACTCATTCTTGGTGG 58 NA Mus musculus 50 Eef2k ENSMUSG00000035064 ENSMUST00000047875,ENSMUST00000098076,ENSMUST00000106489,ENSMUST00000106487,ENSMUST00000106488 3 5 5 90 7 128023911 128023929 TGTACTTTGAGGATGTGCA 58 128023983 128028182 ATGATATCCACCTGCTTGG 59 NA Mus musculus 50 B830045N13Rik ENSMUSG00000035131 ENSMUST00000074622 2 1 2 80 1 148678847 148678865 TACACAAGCTCTTTAGCCT 58 148678907 148748144 AGTAGGTTGATGTTCTCTGTC 59 NA Mus musculus 50 Dennd1a ENSMUSG00000035392 ENSMUST00000102787,ENSMUST00000090997,ENSMUST00000040406 2 3 3 80 2 37904309 37982064 GCTTCTGTATCTTAAGCTACCT 59 37904250 37904268 GTTTCGTCGTGTAATCTGC 59 NA Mus musculus 50 Map3k7ip3 ENSMUSG00000035476 ENSMUST00000048250 2 1 1 69 X 82873541 82873559 TTAGTGTGACTTCCAAAGC 57 82873591 82875754 CTTAAATGTTCATCTGCAGC 57 NA DesignRelaxed Mus musculus 50 Ric8b ENSMUSG00000035620 ENSMUST00000038523,ENSMUST00000095385 3 2 2 121 10 84410661 84410679 GACCATAATGGACCTCCTC 58 84410763 84420777 AACTGATGAGAATCGCTCTC 59 NA Mus musculus 50 4930480E11Rik ENSMUSG00000035651 ENSMUST00000035626 3 1 1 60 X 75616035 75616057 CTATGATATGCCAGGAATACTCC 59 75616076 75616095 TGAGTTGTAATTCCATCCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rnf126 ENSMUSG00000035890 ENSMUST00000047203 1 1 1 83 10 79225066 79225236 GCCATTTGAGAATGTGGAC 59 79225001 79225019 AAGCTATCGTCGAAGATGC 59 NA Mus musculus 50 Surf6 ENSMUSG00000036160 ENSMUST00000114043,ENSMUST00000047632 1 2 2 117 2 26755337 26755355 TCACAAGACTAAAGCCCTG 59 26754935 26755256 GCCTTGGCTATCTTTAGGG 59 NA Mus musculus 50 2610024E20Rik ENSMUSG00000036501 ENSMUST00000040506 2 1 1 80 18 34614432 34617333 CACTTTCCTTCACTAGAATTCG 59 34614373 34614392 CCAACTGATATGGTGTTCTG 58 NA Mus musculus 50 Atp13a2 ENSMUSG00000036622 ENSMUST00000037055 3 1 1 98 4 140558927 140559077 CTAACAAGGGATACTGTGGA 58 140559138 140559156 CAGAGTCTGGATAACTGGG 58 NA Mus musculus 50 Clca5 ENSMUSG00000036960 ENSMUST00000040465 2 1 1 81 3 144735150 144735168 CATGAAAGTGGAAGACGAC 58 144734673 144735106 TTCATAGCTTGTAGTTTGCC 58 NA Mus musculus 50 Frem2 ENSMUSG00000037016 ENSMUST00000091137,ENSMUST00000108016 1 2 2 83 3 53325051 53325969 TTCGATTCCAACAGGTCAG 59 53324986 53325007 AGAGATTCTTCTTAGACAGCAG 59 NA Mus musculus 50 Setd7 ENSMUSG00000037111 ENSMUST00000037141 2 1 1 80 3 51336947 51336968 CCACTTTGATAAATCGACTTCC 59 51334102 51336907 ACATAAACCCTCTCAGACTC 58 NA Mus musculus 50 Cdkn3 ENSMUSG00000037628 ENSMUST00000067426 3 1 1 81 14 47384236 47384254 GGTTTATGTGCTCTTCCAG 58 47384713 47386868 CGTAGCTCTTTAGTTCTTCTG 58 NA Mus musculus 50 BC010304 ENSMUSG00000038014 ENSMUST00000060805 2 1 1 81 13 49029367 49029385 TGTTCGCAACATTCATGAC 59 49027748 49029323 GTCATCTGTTCTTGACTGTG 58 NA Mus musculus 50 Fkbp14 ENSMUSG00000038074 ENSMUST00000046520,ENSMUST00000114394 2 2 2 93 6 54535863 54535881 CCTGGAAATTCGAAATGGC 59 54529672 54535809 CACTTTAACCTCATGCTTAGAG 58 NA Mus musculus 50 Enpp6 ENSMUSG00000038173 ENSMUST00000039840 2 1 1 95 8 48139041 48150735 CTCATTAAAGAGTGGCCGA 59 48150793 48150812 TTTCTCTGAGGTGATGAAGG 59 NA Mus musculus 50 Tcte2 ENSMUSG00000038347 ENSMUST00000053376 1 1 2 72 17 13850186 13850985 TTCTAAGAACCAGGTGACC 58 13850132 13850150 CTACCCATTCTCCAAGCTG 59 NA DesignRelaxed Mus musculus 50 Pigu ENSMUSG00000038383 ENSMUST00000099167,ENSMUST00000077626 1 2 2 86 2 155156943 155156961 CAGTATGCTCCAGATGTGG 59 155154408 155156893 TAGGAGATAGAACAGGGCC 59 NA Mus musculus 50 Cyp3a16 ENSMUSG00000038656 ENSMUST00000031633 2 1 1 80 5 146216483 146216773 GCTGTGAAAGATGTGTTAGG 58 146216422 146216442 GTTGAGGGAATCTATGTTCAC 58 NA Mus musculus 50 Ube3c ENSMUSG00000039000 ENSMUST00000049453 1 1 1 80 5 29933571 29933589 CAAGGATGGCTTCTATCTG 57 29933632 29941464 CTAAACTGTAGAGAAGCCTG 57 NA Mus musculus 50 Tlr4 ENSMUSG00000039005 ENSMUST00000107365 3 1 2 186 4 66488953 66494949 GAGGTAGTTCCTAATATTACCTACC 59 66495092 66585416 ATTCAGTGTTCATCTCCCTG 59 NA Mus musculus 50 Akap7 ENSMUSG00000039166 ENSMUST00000041984 1 1 3 91 10 24959495 24959513 CATCCTAGCTGGAGAAAGC 59 24940555 24959440 TTCTCACTCCCTTCTTCCT 59 NA Mus musculus 50 Ciz1 ENSMUSG00000039205 ENSMUST00000113334,ENSMUST00000075923,ENSMUST00000113338,ENSMUST00000113336,ENSMUST00000048978,ENSMUST00000113332,ENSMUST00000048964,ENSMUST00000113331 2 8 8 80 2 32233080 32233098 AGTTCTACGACAGCAACTC 59 32233139 32233493 CTTTGTATTTCTGCAGGTTCTC 59 NA Mus musculus 50 Dusp10 ENSMUSG00000039384 ENSMUST00000048655 1 1 1 90 1 185893021 185893039 TTCAACTACAAGAGGCTGC 59 185893093 185898145 GAGCTTCCTCGATGAACTC 59 NA Mus musculus 50 Rbms2 ENSMUSG00000040043 ENSMUST00000099139,ENSMUST00000092033,ENSMUST00000105247,ENSMUST00000076233 3 4 4 194 10 127580603 127582741 ACAAATGGCAAAGCAACAG 59 127575230 127575249 TCACACTTCTCTGTTGACTC 59 NA Mus musculus 50 Cacng5 ENSMUSG00000040373 ENSMUST00000106742,ENSMUST00000039071 2 2 2 67 11 107742915 107742933 CGGCATCTTCTTTATCCTC 57 107739310 107739328 TGATGCTGGAGATGTACAG 58 NA DesignNoJunction Mus musculus 50 Lrfn2 ENSMUSG00000040490 ENSMUST00000046254 3 1 1 193 17 49210608 49235585 TGATCTACAGGATGATCCCA 59 49235741 49235759 CTGACTGTGCATAGACTGG 59 NA Mus musculus 50 Gm885 ENSMUSG00000040528 ENSMUST00000106794,ENSMUST00000086353 2 2 3 87 11 106616357 106622506 CAATGGCCAAAGATGAGAG 58 106622554 106622575 ACTAGGACTATTACCAGTATCC 57 NA Mus musculus 50 Cyp2b13 ENSMUSG00000040583 ENSMUST00000005669 1 1 1 90 7 26866754 26866772 ACAGATGAACAGTTCCTGC 59 26866825 26870887 AGAAGAGCTCAAACATCTGG 59 NA Mus musculus 50 Scamp5 ENSMUSG00000040722 ENSMUST00000046587 3 1 1 126 9 57295034 57299175 TACCTCTGGATGTTGAACAG 59 57294927 57294945 AAGGTGTGAAGAGGATGAG 58 NA Mus musculus 50 Rps19 ENSMUSG00000040952 ENSMUST00000048156,ENSMUST00000108430,ENSMUST00000108429 2 3 3 69 7 25673356 25673374 CAAGATCTATGGAGGACGG 58 25673407 25673425 CACACTCTTAGAGCCTCTG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Tspyl2 ENSMUSG00000041096 ENSMUST00000044509 1 1 1 80 X 148774224 148774244 CCCAGTACGCTACTATATGAG 58 148773924 148774182 TGATTCTTGGCTCTTTCCT 58 NA Mus musculus 50 Serpina5 ENSMUSG00000041550 ENSMUST00000021495 2 1 1 89 12 105342076 105343384 AAGTTGTCTGAGATGGTGC 59 105343437 105343455 GAATGTGAAGATGGCTCCT 59 NA Mus musculus 50 D11Wsu99e ENSMUSG00000041629 ENSMUST00000042319,ENSMUST00000100250 3 2 2 105 11 113538695 113538713 AGGAGAAGAAATGGCAGTG 59 113524848 113538626 TGCTTGAAGACTCTGTGTC 59 NA Nonspecific Mus musculus 50 Amot ENSMUSG00000041688 ENSMUST00000039988 1 1 1 84 X 141914601 141914619 CTGTCTGATGAGAATCGCA 59 141910870 141914553 TTTCTGTCTCCACCTTCTG 58 NA Nonspecific Mus musculus 50 Tnfrsf14 ENSMUSG00000042333 ENSMUST00000045919,ENSMUST00000105633 3 2 2 111 4 154297352 154297370 CTTGTGATAGTGGGAGCTG 59 154296418 154296591 TGTTCTCCTGTTGTTCCTG 59 NA Mus musculus 50 Snag1 ENSMUSG00000042364 ENSMUST00000109241,ENSMUST00000037864 3 2 2 64 13 114407051 114407070 CTGTTAGCACTGTATCAGGG 59 114385067 114407024 GCTCCTTTCTGAACATGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gtlf3a ENSMUSG00000042549 ENSMUST00000042143 1 1 1 60 11 60735152 60735170 CCACTACATAAGCACAGAG 57 60735110 60735128 ACTGTCAATATGGAGCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4632404H12Rik ENSMUSG00000042579 ENSMUST00000038450 2 1 1 60 3 89573484 89576441 TAGGCCAAGTTTAACTCCA 58 89573442 89573461 GAGATGAATCCAGGAGAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 D130020L05Rik ENSMUSG00000042922 ENSMUST00000055270 2 1 1 89 12 102322348 102322366 AAAGCTGATCGTCTGTAGC 59 102322418 102322437 CATTTATCTTTGCAAGCCCT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Eif3j ENSMUSG00000043424 ENSMUST00000057110 1 1 1 60 18 43637229 43637247 GACGTGAAGGATAACTGGG 59 43637187 43637205 GTTTGACTTCTGCTTCCTC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Elfn2 ENSMUSG00000043460 ENSMUST00000088592 1 1 1 60 15 78504199 78504217 TTCAACTGTGAGTGTGACC 59 78504157 78504175 TGACATTGTTGAAGACCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr133 ENSMUSG00000044017 ENSMUST00000056617 3 1 1 80 5 129618189 129620939 GCGACTGTAGATATCATGGA 58 129620981 129621000 ATAGTAGAGAAACGTCACGC 59 NA Mus musculus 50 Fmn1 ENSMUSG00000044042 ENSMUST00000102547,ENSMUST00000099576,ENSMUST00000081349 3 3 6 81 2 113443438 113476898 AACTAGAAGCAAGTGAGCA 58 113476943 113476961 AGTTTGTCCTTGAAAGGCT 59 NA Mus musculus 50 5430405G05Rik ENSMUSG00000044364 ENSMUST00000060196,ENSMUST00000109872 3 2 2 66 2 151532325 151532343 TCTTTGCATTCAGAGGAGG 59 151532373 151532391 AAACAAAGCCATAGTCCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr867 ENSMUSG00000044454 ENSMUST00000060780 2 1 1 60 9 19859530 19859548 TATGATCGCTTTGTAGCCA 58 19859488 19859508 GTCGAGGGTTCATAATAACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG212225 ENSMUSG00000044457 ENSMUST00000051224 1 1 1 99 1 46078783 46081757 TAGATGCAGAGTTCATCCC 58 46078702 46078720 ATTGCCATTCACTGATGTC 58 NA InUTR Mus musculus 50 4930578I07Rik ENSMUSG00000044480 ENSMUST00000052898 3 1 1 60 14 67557404 67557422 TTCCAAGTATGACCATGGC 59 67557446 67557464 AATGCTGAAGAAGGTGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr545 ENSMUSG00000044824 ENSMUST00000058750 3 1 1 90 7 109642426 109642444 GCTTTCTATCTGTTGCTCC 58 109642354 109642372 GGAATGACCTTACCAGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp444 ENSMUSG00000044876 ENSMUST00000108567,ENSMUST00000054680,ENSMUST00000108566 3 3 3 180 7 6141514 6141532 GTAGCTCAAGGGACTTCAG 59 6141676 6141694 GAGAACTCCAGAAGGAAGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 4933429F08Rik ENSMUSG00000045094 ENSMUST00000051931 1 1 1 80 18 61666897 61666915 TCTTTCCAAGAAGACCACC 59 61666155 61666854 AATTCCTTGTCTTCTGTCCG 59 NA Mus musculus 50 Krtap5-4 ENSMUSG00000045236 ENSMUST00000061403 2 1 1 249 7 149489486 149489504 CAAACTCCAGAACCATGAC 58 149489717 149489735 CAACTGGATTGACAACAGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Adra2c ENSMUSG00000045318 ENSMUST00000049545 3 1 1 60 5 35623827 35623848 CATCTACACTGTCTTCAATCAG 58 35623868 35623887 CCTTCGAAAGAGGATATGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 1190002N15Rik ENSMUSG00000045414 ENSMUST00000061904 1 1 2 124 9 94420848 94420866 TGAAATTGCCAAAGATGGC 59 94420740 94420760 CACATTGTGACTTCTGTGC 59 NA Mus musculus 50 BC049730 ENSMUSG00000045587 ENSMUST00000051714 3 1 1 100 7 25495233 25497492 CTGCTCAGATACTCTGAACTG 59 25497553 25497572 ACCCAACTGTCTGATTTACG 59 NA Mus musculus 50 1700101I19Rik ENSMUSG00000045815 ENSMUST00000062557 2 1 1 83 1 34636241 34636259 GTATACCCGGAGACTACAG 57 34636176 34636194 TTTGGAAAGAGCTGGAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr803 ENSMUSG00000046041 ENSMUST00000056736 3 1 1 60 10 129128520 129128538 TTGCTCAGATACTTGGCTC 59 129128478 129128496 CAGTAGAGTAACCAGAGCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 E2f8 ENSMUSG00000046179 ENSMUST00000058745,ENSMUST00000094379 2 2 2 82 7 56127264 56127467 AGAGCAACAAAGCTGAGAG 59 56127200 56127218 CTGCATCTTGCAAATAGCG 59 NA Mus musculus 50 Olfr93 ENSMUSG00000046228 ENSMUST00000050326 3 1 1 60 17 37288601 37288619 CTTCATCTTCATGCTCCTG 57 37288559 37288577 GTCAAAGGCCATTACTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hnrnpa1 ENSMUSG00000046434 ENSMUST00000036004,ENSMUST00000087351 3 2 2 80 15 103072013 103072343 TCTCAAGAGAAGATTCTCAGC 59 103072382 103072403 CAGTGTCTTCTTTAATACCACC 58 NA Nonspecific Mus musculus 50 Actrt1 ENSMUSG00000046615 ENSMUST00000059466 1 1 1 60 X 43682337 43682357 TTCTGGACTCTGTAAAGTTGG 59 43682379 43682397 AGAGTTGATGACATGACGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Myct1 ENSMUSG00000046916 ENSMUST00000051809 1 1 1 191 10 4742038 4742056 GACTTTCCATCCCTTCCTG 59 4741865 4741883 ATGGATTCATAGGCAGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001025049.1 ENSMUSG00000048814 ENSMUST00000039612 3 1 1 80 1 38863934 38863953 ATGATAAGGAGATGCATGGA 58 38861234 38863891 ATACTCTGAAATCCCTGCG 59 NA Mus musculus 50 Frmd3 ENSMUSG00000049122 ENSMUST00000056548,ENSMUST00000084474,ENSMUST00000098006 1 3 3 80 4 73807955 73807975 GTAAAGTTGCTAAAGAGGTGG 58 73808014 73816555 GAGTAATGTTGACTCTATGCAC 58 NA Mus musculus 50 Stxbp4 ENSMUSG00000049992 ENSMUST00000053420 2 1 1 60 11 90339074 90339094 GTGATATACGCATTCTGTTGC 59 90339034 90339054 GGTATTCTGGGAAGTGATAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ppp1r3d ENSMUSG00000049999 ENSMUST00000058678 3 1 1 71 2 178148131 178148149 ATAGCCTTACTTGTCGCAG 59 178148078 178148096 TGAAGTGAATCCAGCTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Clrn3 ENSMUSG00000050866 ENSMUST00000053716 1 1 1 98 7 142705876 142710130 GCATCCTTTGTGTTTCTGG 59 142705796 142705815 TGTGGTATCTGGATAAAGCT 58 NA DesignNoJunction Mus musculus 50 Sgms2 ENSMUSG00000050931 ENSMUST00000090246 1 1 1 80 3 131028010 131033248 CAAAGAATATTCACCTCGTCAC 59 131027951 131027969 AGAATGCAGATGATCCCAG 59 NA Mus musculus 50 Irf2bp2 ENSMUSG00000051495 ENSMUST00000054960 3 1 1 87 8 129115719 129116348 CTAAAGCAGTTGCAAGGAC 59 129115650 129115670 GTCTCACCATTGATCTTAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gprin2 ENSMUSG00000051843 ENSMUST00000063372 2 1 1 63 14 35003271 35003289 GTCCTATCACTCCAAACCG 59 35003226 35003244 ATGGCCTAAGGGAAATACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tas2r144 ENSMUSG00000051917 ENSMUST00000063489 3 1 1 60 6 42165447 42165465 ATCTATGGGACTGAATGGG 58 42165487 42165507 TCAACATAAGGTTCTCACCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1190017O12Rik ENSMUSG00000051989 ENSMUST00000063641 2 1 1 124 16 92301586 92305549 AGTATCAGAACTTCCAGCTC 58 92305636 92311057 GTGTTCAAGAACCTTCCAG 58 NA InUTR Mus musculus 50 Ppp4r2 ENSMUSG00000052144 ENSMUST00000063854 2 1 1 80 6 100802634 100811409 TCACTGGATTTAATGGTATCCC 59 100811447 100811468 TTCCTGTATAGTTTCTTCTCGG 59 NA Mus musculus 50 Bpi ENSMUSG00000052922 ENSMUST00000109500,ENSMUST00000109499,ENSMUST00000065039 3 3 3 80 2 158093467 158093485 ATCTGCAAGATCGTGAGAG 59 158093528 158094594 ATCCACTCTGGTTATCACAG 58 NA Mus musculus 50 Socs3 ENSMUSG00000053113 ENSMUST00000054002 2 1 1 60 11 117828921 117828940 ACTCCTATGAGAAAGTGACC 58 117828880 117828899 TCATACTGATCCAGGAACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Eif3k ENSMUSG00000053565 ENSMUST00000098615 1 1 3 215 7 29759230 29759624 AATTTATCTGCCACGTGGT 59 29757296 29757560 CAGTCTGGTTGTCAAAGTC 58 NA DesignRelaxed Mus musculus 50 Fate1 ENSMUSG00000053593 ENSMUST00000066116,ENSMUST00000114569,ENSMUST00000114568 3 3 3 60 X 69233835 69233853 ATATCCTTGAGGACCAGGA 58 69233877 69233895 AACAGAGTAAAGAGCGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4922502B01Rik ENSMUSG00000054165 ENSMUST00000067018 3 1 1 60 8 111773029 111773048 AAGAGATTCCCTATGATGCT 57 111772988 111773006 GAAGACACATCATGGAAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rhob ENSMUSG00000054364 ENSMUST00000067384 1 1 1 60 12 8506229 8506247 GGACTACGATCGTTTACGG 59 8506187 8506205 GAAGCACATAAGGATGACG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ms4a5 ENSMUSG00000054523 ENSMUST00000067673 3 1 2 178 19 11353865 11358145 TTGGAGATCTTAGGGACCA 59 11352198 11352216 TTCAGAGCAATCAGGAAGG 59 NA DesignNoJunction Mus musculus 50 EG432939 ENSMUSG00000056089 ENSMUST00000069992 3 1 1 64 15 25344332 25344350 AAAGGAAGAAATGCACCCT 59 25344378 25344396 GACTTCCATGAAAGCACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 R3hdm1 ENSMUSG00000056211 ENSMUST00000036288,ENSMUST00000097596 2 2 2 80 1 130075749 130078301 TTTCCCAAGATTCCCTGTG 59 130078428 130078446 GCTGGGTACCAATAGTGTC 59 NA Mus musculus 50 Ms4a4b ENSMUSG00000056290 ENSMUST00000060844 2 1 2 78 19 11529254 11532299 CAATAATGTTCATTGTCTCCGG 59 11532337 11532356 ACCAAATTACATACCAGGCA 59 NA DesignRelaxed Mus musculus 50 Rnf12 ENSMUSG00000056537 ENSMUST00000070705 2 1 1 126 X 101161923 101161941 AGAAGTCAAATGGATCGCT 58 101160659 101161833 CCTCAGTACTTTCACCTGG 59 NA Mus musculus 50 Cep110 ENSMUSG00000057110 ENSMUST00000028237,ENSMUST00000113034,ENSMUST00000113032 1 3 7 80 2 35023398 35024769 GCAGCTACAAGGTAAACAG 58 35024813 35024831 TTTGCTAGGTCCAAATGGT 59 NA Mus musculus 50 Chd6 ENSMUSG00000057133 ENSMUST00000039782,ENSMUST00000039749 1 2 3 80 2 160838801 160838819 CTCATCTTCTCGCAGATGG 59 160834268 160838760 AATTCGCTCATAGGTGTATCTC 59 NA Mus musculus 50 Prl3d1 ENSMUSG00000057170 ENSMUST00000082079 3 1 1 80 13 27190558 27190576 AAAGCTGCTGACATTAAGG 58 27190620 27191807 AATGTTAGCCTGAGTCCTG 58 NA Nonspecific Mus musculus 50 Mrps14 ENSMUSG00000058267 ENSMUST00000078878 2 1 1 64 1 162127224 162129565 AAGGACCTTCAGGAAATGG 59 162129593 162129611 CTAACAGGACAGCTATCCC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 V1rb1 ENSMUSG00000058595 ENSMUST00000081706 3 1 1 60 6 90057737 90057755 ACCTTCAATTCAACCTCAG 57 90057778 90057797 CAGGTAGAATTGAACAGGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rad51l1 ENSMUSG00000059060 ENSMUST00000079533 3 1 1 80 12 80403509 80403527 TGAGTTACAGAGGTGTCCA 59 80403570 80404331 TTAACTCATAAGCCGTTTGC 58 NA Mus musculus 50 Zfp426 ENSMUSG00000059475 ENSMUST00000115562,ENSMUST00000080386 3 2 2 85 9 20279404 20279422 CACTGAACCCAGATCAGAG 59 20277539 20279356 GATGAGCTGATACCCTACTG 59 NA Mus musculus 50 Ccdc28a ENSMUSG00000059554 ENSMUST00000080860,ENSMUST00000052648 3 2 2 277 10 17950310 17950329 TACTCAGGTTGTTAATGCCA 58 17939440 17944712 ATTCATTTCCAAACGCCTG 59 NA DesignRelaxed Mus musculus 50 Zfp422 ENSMUSG00000059878 ENSMUST00000057540,ENSMUST00000112880,ENSMUST00000079749 3 3 3 65 6 116576624 116576642 CCTACTGCTGTGATGAGTG 59 116576577 116576595 TTCTCTGGTGCTGAATGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4833409A17Rik ENSMUSG00000060224 ENSMUST00000076505 3 1 1 81 19 42802256 42804119 CTGGAGGGAACATATTCCAC 59 42802194 42802212 CTGTAGTCAGAGTGTTGGG 59 NA Mus musculus 50 D630023B12Rik ENSMUSG00000061175 ENSMUST00000076136 3 1 1 80 3 79296803 79296823 AGATCTCTGAATCAAGTCTCC 58 79293304 79296763 AGATAGTCCCTCTGAATTCTC 58 NA Mus musculus 50 Olfr601 ENSMUSG00000061200 ENSMUST00000080474 3 1 1 60 7 110507034 110507053 CTCCTATGTTCTGATCCTCC 58 110506993 110507011 TTTAAGACTTGCTTCTCGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Klra6 ENSMUSG00000061769 ENSMUST00000074056 3 1 1 118 6 129972686 129972704 TATAGACTCTAGGCCAGGC 59 129968976 129972605 ATTTAACACCTGTCCCTGTG 59 NA Mus musculus 50 Rapgef2 ENSMUSG00000062232 ENSMUST00000037943 1 1 2 80 3 78891818 78891836 GAGTTATCAAACAACGCCG 59 78890040 78891777 TCAGATAATACCTTCCACTCAG 58 NA Mus musculus 50 Dgkk ENSMUSG00000062393 ENSMUST00000067410 1 1 1 80 X 6482693 6482711 TAAAGGCACATCACCACTG 59 6482754 6483587 ATCATCACACTCCATCTGTC 59 NA Mus musculus 50 Zfp677 ENSMUSG00000062743 ENSMUST00000056107 1 1 1 95 17 21529501 21530145 GGAAATATGTCTCAGGGTCTG 59 21530202 21530220 CAAAGACCTCTGAGCAGAG 59 NA Mus musculus 50 Olfr1355 ENSMUSG00000062873 ENSMUST00000078414 2 1 1 60 10 78342201 78342220 TATGCAGACTGTATTAGCCA 58 78342242 78342261 GAAAGTTGTCCAGTTCTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000063611 ENSMUSG00000063611 ENSMUST00000074761 2 1 1 60 2 28361881 28361901 GGTTATTCCAGGAGATAGAGC 59 28361920 28361941 CAGAACTGGAATAAGCAATCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-18a ENSMUSG00000065403 ENSMUST00000083469 3 1 1 60 14 115443102 115443121 GTGCAGATAGTGAAGTAGAC 57 115443144 115443162 ACTTCTTATGCCAGAAGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-325 ENSMUSG00000065425 ENSMUST00000083491 2 1 1 60 X 102574474 102574493 GCTCAGTAAGTGTTTGTGAC 59 102574433 102574452 ACAGTGCTTGATTGATAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-382 ENSMUSG00000065428 ENSMUST00000083494 1 1 1 60 12 110971982 110972001 ACTTGAAGAGAAGTTGTTCG 58 110972024 110972042 TTGTCCGTGAATGATTCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr139 ENSMUSG00000066197 ENSMUST00000084650 2 1 1 257 7 126288757 126327790 ACCAGCAAATATCTTGACAG 57 126288519 126288537 TACCTGTCAACCGTTAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 NM_001111282.1 ENSMUSG00000066530 ENSMUST00000085496 3 1 1 145 19 29235507 29235526 TAAAGCAGGTACTTGTTGGT 59 29235633 29235652 GTATAAGCTGCATCAGAGAC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 2210010N04Rik ENSMUSG00000066621 ENSMUST00000085701 1 1 1 151 5 144967425 144968270 AGAAGAAGTACCTACACGT 57 144967292 144967310 ATTCATGTCTTGCTCTGTG 57 NA Mus musculus 50 Ecsit ENSMUSG00000066839 ENSMUST00000098937 1 1 1 80 9 21877919 21877938 CTCTGGCTTCGTAATAAGTG 58 21877520 21877878 CTCCTCTACTTTCTCTTCCTC 58 NA Mus musculus 50 Fbxl12 ENSMUSG00000066892 ENSMUST00000086458,ENSMUST00000086459,ENSMUST00000115552 3 3 3 78 9 20443029 20443047 CTGTCCTGGAGAGTTTGTG 59 20442969 20442987 CAGGAGGACACAATCTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 V1rb10 ENSMUSG00000067262 ENSMUST00000087287 1 1 1 60 X 143887927 143887945 TACCTGTCTGCTGAATGTC 58 143887885 143887905 TGTTAAACAGGAGCTTCTAGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Olfr1427 ENSMUSG00000067525 ENSMUST00000087825 1 1 1 60 19 12173278 12173296 ATTGTTCCTGTCCTGAACC 59 12173236 12173254 TGGCTGATTTCATCTCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rpl31 ENSMUSG00000067870 ENSMUST00000088648 1 1 1 60 15 90594752 90594771 TAACTTACGTGCCTGTTACC 59 90594711 90594730 TAGTTCTCATCCACGTTGAC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Reg3d ENSMUSG00000068341 ENSMUST00000089667 2 1 1 80 6 78326516 78327118 CATGATCTGTCACTTGGGA 58 78326454 78326474 CCAGTTATAGAAGGTCAGAGG 59 NA Mus musculus 50 Olfr1513 ENSMUSG00000068385 ENSMUST00000111545,ENSMUST00000089739 1 2 2 70 14 52969633 52969651 GAGGACATTCCTGTTTGTG 58 52969581 52969599 TCAGGATGATCATGTTCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Slc25a31 ENSMUSG00000069041 ENSMUST00000091184 1 1 1 88 3 40525504 40525523 TATACCAAGGGTTTGGTGTC 59 40525574 40526556 CAATAAGCCCTTAACGGTG 58 NA Mus musculus 50 NM_206882.1 ENSMUSG00000069311 ENSMUST00000091753 1 1 1 66 11 58767985 58768004 CTTCATTTGAATGCAAGGCA 59 58767938 58767956 AGTTGTACTACGGAAACGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Taar3 ENSMUSG00000069708 ENSMUST00000045152 1 1 1 60 10 23669409 23669428 TTTGGAAATAAATCCTGCCC 58 23669451 23669469 GGTACATTATCATGCGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Itgad ENSMUSG00000070369 ENSMUST00000106237,ENSMUST00000033051,ENSMUST00000098012 1 3 3 80 7 135346482 135346501 ACCAAGCATTTCAACTTCTC 58 135346544 135346686 ACTCAGGTTATTCACACGA 58 NA Mus musculus 50 1700010H23Rik ENSMUSG00000070388 ENSMUST00000108504 3 1 2 88 11 72131276 72131294 CTATTTCAGTGACCCGGAC 59 72131346 72131856 CGAACGTTAACTTCTGCAG 59 NA Mus musculus 50 Pnmal2 ENSMUSG00000070802 ENSMUST00000094807 2 1 1 60 7 17531029 17531047 CCTGGGTATCGTCATAGAG 58 17531071 17531089 CCTCTGGTCTTCATCTACG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rabepk ENSMUSG00000070953 ENSMUST00000113086,ENSMUST00000047963,ENSMUST00000113088 3 3 3 99 2 34636254 34640073 TGATATAGGTGACATGAGCTG 59 34636175 34636194 ATATACATGGTGTCCCACAG 58 NA Mus musculus 50 Naip5 ENSMUSG00000071203 ENSMUST00000049789,ENSMUST00000091317 1 2 2 95 13 101012751 101012769 TATTCAAAGCTACGAGGGA 57 101000730 101003303 TTGCAGTAAGCTGATACCA 58 NA Mus musculus 50 AI462493 ENSMUSG00000071654 ENSMUST00000096253 1 1 1 152 19 8955204 8955222 GAACTACAGAAGCAGTCGA 59 8954981 8954999 AACTGTCCAGTTTCTCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Vmn2r122 ENSMUSG00000072049 ENSMUST00000094491 2 1 5 93 X 121242286 121243454 CCAATGAAACAGCAGATATGG 59 121242213 121242231 GATACAGCTCTTGAGAGGC 59 NA Mus musculus 50 Gdf2 ENSMUSG00000072625 ENSMUST00000100720 3 1 1 60 14 34754677 34757868 AAGATGCTATATCGACAGCT 58 34757890 34757909 AAGATCAGGATGTGCTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr27 ENSMUSG00000072875 ENSMUST00000101122 3 1 1 229 6 99643297 99643315 CTCTTCTTCATCCACGACC 59 99643507 99643526 CTCTTCTCCGTCTTGAACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nfxl1 ENSMUSG00000072889 ENSMUST00000087216,ENSMUST00000074948 3 2 2 181 5 72932270 72941547 GATTATCCCTGGCCATGTC 59 72932107 72932125 AGCAAGCATTTATGACCAC 58 NA DesignNoJunction Mus musculus 50 1700030C10Rik ENSMUSG00000073182 ENSMUST00000075542 2 1 1 74 12 20821053 20821071 GTTTCTGGTCTTCCTAAGC 57 20820997 20821015 CTAGAACAGGGACCAAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073366 ENSMUSG00000073366 ENSMUST00000097269 3 1 1 83 17 95234642 95234660 GATGACAAACTGTAGAGCA 57 95234706 95234725 TGTACTAAGACAACTGTGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 B230354K17Rik ENSMUSG00000073393 ENSMUST00000097319 3 1 1 80 17 45574074 45574093 TCTCATTATTCGGTTAGCCG 59 45574136 45576095 TCCTTACGAACAGGTTCTG 58 NA Mus musculus 50 ENSMUSG00000073394 ENSMUSG00000073394 ENSMUST00000097320 3 1 1 87 17 44873311 44874305 AGACACGACTCAAACTGAG 59 44874356 44874374 GAAGGCTCAGAATTTGAGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 EG619517 ENSMUSG00000073396 ENSMUST00000097324 2 1 1 104 17 40865833 40867844 CTGAAGGAAGGGTTCTGAC 59 40867912 40867930 GTACTTCTTGAGGGTCAGG 58 NA Mus musculus 50 Lst1 ENSMUSG00000073412 ENSMUST00000097336,ENSMUST00000113924,ENSMUST00000113923 1 3 3 128 17 35325302 35325320 GGTAACAATTGCACAACCA 58 35323536 35323895 TTCCAGTCTCTTCACTCTC 57 NA Mus musculus 50 3110052M02Rik ENSMUSG00000073448 ENSMUST00000097384 3 1 1 162 17 21827766 21827784 AGTCATTTCGTCAAACCTC 57 21827909 21827928 CATTCTGGACAACTACAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 3222401L13Rik ENSMUSG00000073590 ENSMUST00000097608 2 1 1 60 18 37817501 37817519 ACGTTGTCTAGCCTTTACC 59 37817542 37817561 ACTTGGTACACTGAAGTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dnahc7b ENSMUSG00000073694 ENSMUST00000097760 1 1 1 60 1 46232661 46232679 GCTTCTATGGTCTCAGTGG 59 46232700 46232721 GTCAACCTCATTCCTATTTGTG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 5730409E04Rik ENSMUSG00000073755 ENSMUST00000097886 2 1 1 60 4 126289046 126289064 AGGATGCCAATAAGAACTG 57 126289085 126289106 CTCCTTATCAGAATAGGATCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 AI427809 ENSMUSG00000073854 ENSMUST00000098075 2 1 1 60 4 53275171 53275189 AAGAATTGCCTGGAGTCAC 59 53275129 53275147 CAGGTAGAAACACTGAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr708 ENSMUSG00000073899 ENSMUST00000098140 2 1 1 87 7 114058541 114058559 GTTCTACTCAGCAGTGACC 59 114058609 114058628 AGTTATTCTCTTGAGAGCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr627 ENSMUSG00000073942 ENSMUST00000098194 2 1 1 60 7 110865288 110865306 CCATGTACCTCTTCCTAGC 58 110865330 110865348 AAGATGCAAGTACTGATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Adh1 ENSMUSG00000074207 ENSMUST00000004232 1 1 1 80 3 137951782 137951800 CAGAACCTCTCCATGAACC 59 137951844 137952779 TTTACTCTTAAACCCGCCA 58 NA Mus musculus 50 EG667283 ENSMUSG00000074304 ENSMUST00000098717 1 1 1 80 7 23545500 23547294 TGAGGCTCAGAAGATTTCC 58 23547338 23547356 AGGAGGAGAAGTACCATGG 59 NA Nonspecific Mus musculus 50 NP_031877.2 ENSMUSG00000074439 ENSMUST00000098892 1 1 1 87 8 22437204 22437222 TAATACTGAGGAGCAGCCA 59 22437270 22437852 CAATTCTTCATGAAGAGCAGAC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 3110057O12Rik ENSMUSG00000074621 ENSMUST00000056214 3 1 1 80 3 40671421 40671547 GGAGACCATCATTACTGGAG 59 40671589 40671608 TAACAACAATGAAGCCATCC 58 NA Nonspecific Mus musculus 50 Olfr1086 ENSMUSG00000075175 ENSMUST00000099878 1 1 1 60 2 86516907 86516925 TGACACCCACTTCAATCAG 59 86516865 86516885 AGTGACTACCTCAATAAACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1086 ENSMUSG00000075175 ENSMUST00000099878 2 1 1 60 2 86516924 86516943 CCTGGCAATTTCATGTTCTG 59 86516883 86516901 CCCAGCACAATAGAAGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1043 ENSMUSG00000075201 ENSMUST00000099907 1 1 1 60 2 86002695 86002714 CTCTATGTCATTCTCATGCC 57 86002654 86002673 AAATGTACGTGGTAATGGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dfnb59 ENSMUSG00000075267 ENSMUST00000099986 2 1 1 86 2 76495578 76496318 CTTCGAAAGAAACAGGAGAG 58 76496367 76496385 GGTTTGTCGTAGAAGTCAG 57 NA Mus musculus 50 Alg10b ENSMUSG00000075470 ENSMUST00000100309 2 1 1 95 15 90056201 90056222 GCTCAGATTTGTCAATCTTCTC 59 90056276 90057765 CTTGAAGAAGCCTTGTTTCTG 59 NA Mus musculus 50 ENSMUSG00000075584 ENSMUSG00000075584 ENSMUST00000100516 2 1 1 130 14 56998821 56998840 ATCAAATGTGTAGCTTTGGG 58 56997398 56997416 GAGTGTAGTTCAGTGGTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 mmu-mir-374 ENSMUSG00000076269 ENSMUST00000102314 1 1 1 64 X 100768474 100768492 AAGAAATCCTACTCGGGTG 58 100768428 100768446 ATACAACCTGCTAAGTGCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-36 ENSMUSG00000076704 ENSMUST00000103513 2 1 1 61 12 116118172 116118190 CCACATTGACTGTAGACAC 57 116118129 116118147 AGAAGTCAGGCTGTTTAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV13D-4 ENSMUSG00000076823 ENSMUST00000103634 2 1 1 68 14 53983590 53983608 TCTTTACAAACCAGGTGCA 59 53983640 53983658 GATTGTACAACAGGCTGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV13-2 ENSMUSG00000076846 ENSMUST00000103658 1 1 1 60 14 54255011 54255029 AGCTCTTTGCACATTTCCT 59 54255050 54255071 CTATAGCACAGAAATAAGTGCC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A2AKE7_MOUSE ENSMUSG00000078129 ENSMUST00000104928 2 1 1 62 2 154378397 154378415 GTTACACAGCTCAAGAAGC 58 154378441 154378459 GTCACAGATATCACCCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Q5SVU9_MOUSE ENSMUSG00000078136 ENSMUST00000104938 1 1 1 60 11 90122248 90122269 ATGGCACTAAGACTTAGAATCC 59 90122290 90122308 ACGAATGACAATCCTTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Utrn ENSMUSG00000078467 ENSMUST00000105549 1 1 1 80 10 12469912 12470271 CAGAACAATGTGGACTTGG 58 12469850 12469870 CCAGAGTAACCCTAAAGTCAG 59 NA Nonspecific, InUTR Mus musculus 50 1700024P16Rik ENSMUSG00000078612 ENSMUST00000106804 3 1 1 80 4 104662892 104662910 CATGACTGACATCATGCAG 58 104662954 104668312 ACGTACCCACTCTTATCCT 59 NA Nonspecific Mus musculus 50 A2A4T8_MOUSE ENSMUSG00000078668 ENSMUST00000107440 1 1 2 73 11 99633948 99633966 TAGCTGTTGTAGACCTTGC 59 99633893 99633911 TAGAAATGCAGCAAGAAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Arhgap8 ENSMUSG00000078954 ENSMUST00000006029 1 1 1 80 15 84596805 84597536 GCTATATGATCAAGGGAAGC 57 84597578 84597597 AGAAATGTCTTCAGGATCAC 57 NA Mus musculus 50 4930449I24Rik ENSMUSG00000079091 ENSMUST00000110596 2 1 1 60 5 147337869 147337887 TCTACCGAACATATGCCAG 58 147337910 147338466 GATGCATACGTTCTCATCAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 1700110I01Rik ENSMUSG00000079397 ENSMUST00000112791 3 1 1 82 14 3995703 3995721 CAGTGAATCAGAGCAGGAG 59 3995767 4023518 ATCAATGCTACTTGGTCCC 59 NA Nonspecific Mus musculus 50 MGI:1201789 ENSMUSG00000079435 ENSMUST00000113211 1 1 1 226 X 131120195 131120213 CTATAAACTTCCGTTGCGG 58 131121088 131121106 AAATAGGCTTAGTCTGCCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Q8BN85_MOUSE ENSMUSG00000079441 ENSMUST00000113276 2 1 1 60 6 104680527 104680545 ATGTCTGCGGTTTATCCTC 59 104680568 104680587 TCTGATAGACAGCAAGACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Wdr52 ENSMUSG00000079576 ENSMUST00000085772 1 1 1 91 16 44479103 44479121 CACAACCCTTGAAGAACTG 58 44479176 44479968 CTTGAGCGATCTTCTCCTC 59 NA Mus musculus 50 Gm614 ENSMUSG00000079846 ENSMUST00000101358 3 1 1 80 X 98457332 98457729 CTGAACTAGTTGACTCGCT 59 98457270 98457289 TGGCTTCTAGAGTTCTAAGC 58 NA Mus musculus 50 Fads3 ENSMUSG00000079879 ENSMUST00000115995 3 1 1 60 19 10134317 10134338 CCAAACTTTGATGATCCTAGTC 58 10134358 10134377 TTTCAGACAGTATGCTGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG627618 ENSMUSG00000079901 ENSMUST00000116017 3 1 1 68 17 19949332 19949352 GAAGATCATGGTCTCTATGGA 58 19949382 19949400 AATATGAAGGCCAGGAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sox1 ENSMUSG00000079994 ENSMUST00000116111 3 1 1 61 8 12396703 12396721 CACCCGGATTACAAGTACC 59 12396746 12396764 TACTTGTCCTTCTTGAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 6330578E17Rik ENSMUSG00000080025 ENSMUST00000116141 2 1 1 60 1 37474920 37474939 AACCACCATTCTCTTTCCTG 59 37474879 37474897 GTCCACATATACCAGGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fert2 ENSMUSG00000000127 ENSMUST00000038080,ENSMUST00000112829 3 2 4 167 17 64322493 64330836 TCGGATCTTCAACAGTGTG 59 64330966 64330985 AAAGGACATATTCACCAGGT 58 NA Mus musculus 50 Tcfe3 ENSMUSG00000000134 ENSMUST00000115679,ENSMUST00000077680,ENSMUST00000079542,ENSMUST00000115678,ENSMUST00000115680,ENSMUST00000115677,ENSMUST00000101695 2 7 7 81 X 7343973 7344574 GTACTCAAGGTTCAGACCC 59 7344619 7344637 AGTACTGTTTGACCTGCTG 59 NA Mus musculus 50 Mapk7 ENSMUSG00000001034 ENSMUST00000079080,ENSMUST00000108714,ENSMUST00000101085,ENSMUST00000116369,ENSMUST00000094119,ENSMUST00000101086 1 6 6 81 11 61306457 61306475 AACACGACAATATCATCGC 58 61305177 61306414 AGTACCACATAGACAGATCTG 58 NA Mus musculus 50 0610009O03Rik ENSMUSG00000001082 ENSMUST00000001109,ENSMUST00000114329,ENSMUST00000114331 3 3 3 124 5 34978413 34978684 ATGATGTTGTCCCTGACAG 59 34978307 34978325 GTGGAGAGGTTAACGTTCC 59 NA Mus musculus 50 Timp1 ENSMUSG00000001131 ENSMUST00000009530,ENSMUST00000115342 3 2 2 84 X 20448218 20448236 GATAGCTTCCAGTAAGGCC 59 20448284 20449916 TTTAGCCCTTATGACCAGG 58 NA Mus musculus 50 Def8 ENSMUSG00000001482 ENSMUST00000001522,ENSMUST00000065534,ENSMUST00000108832,ENSMUST00000108830,ENSMUST00000108833 2 5 6 96 8 125983743 125983761 TGAACTCTGCAAAGAAGGG 59 125983821 125985376 GTAGTAACAGTCCCTGTGG 58 NA Mus musculus 50 Irx2 ENSMUSG00000001504 ENSMUST00000074372,ENSMUST00000109693 1 2 3 190 13 72769238 72769256 TACGGGAACTTAAACGCAG 59 72769409 72770043 TCACTGGTATCTTTCTTGGG 59 NA Mus musculus 50 Ltbp1 ENSMUSG00000001870 ENSMUST00000112518,ENSMUST00000001927 2 2 5 87 17 75465533 75550613 TACATCCTCAAGTTGCACC 59 75550664 75550682 AAGTACTTGGGTTTGAGCA 59 NA Mus musculus 50 Tiam1 ENSMUSG00000002489 ENSMUST00000114124,ENSMUST00000002588 1 2 4 105 16 89858909 89860458 ATCAACCAGGTGTTTGGAG 59 89856239 89856258 GTAAGACCACTTCCTTCTCC 59 NA Mus musculus 50 Golga2 ENSMUSG00000002546 ENSMUST00000081670,ENSMUST00000113375 3 2 5 88 2 32147728 32152496 CAGAGAATAGCCATGATGCT 59 32152646 32152664 AGAAAGTTGTCGCAGACTC 59 NA Mus musculus 50 Axl ENSMUSG00000002602 ENSMUST00000108398,ENSMUST00000002677,ENSMUST00000085948 3 3 3 80 7 26548350 26548368 CAGTGGTATGGAGTACCTG 58 26546569 26548306 ATGTTCTCATTCAGCATGC 58 NA Mus musculus 50 Kcnn1 ENSMUSG00000002908 ENSMUST00000110081,ENSMUST00000110080,ENSMUST00000110078,ENSMUST00000002987 1 4 4 80 8 73376601 73376619 CTGTGTTGTTGGTCTTCAG 58 73374627 73376557 GCTTATCGTGGTACCTCTC 59 NA Mus musculus 50 Ccdc65 ENSMUSG00000003354 ENSMUST00000003444,ENSMUST00000109145 3 2 3 63 15 98539532 98539550 AGATTAACACGCAGTGGAG 59 98539577 98539595 ATGTCTTGGTGAAGCTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ptrf ENSMUSG00000004044 ENSMUST00000060792 2 1 3 78 11 100820385 100820403 CTCCAAGGAGAAGATGGAG 58 100820325 100820343 GTTCTCCTTGGTCTTCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cugbp1 ENSMUSG00000005506 ENSMUST00000005643,ENSMUST00000068747,ENSMUST00000111452,ENSMUST00000111455,ENSMUST00000111449 2 5 6 126 2 90844908 90844926 AGAACAGAAGAGAATGGCC 59 90845016 90846791 GAGCTGCAAATAAAGTGCT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Clcnkb ENSMUSG00000006216 ENSMUST00000105788,ENSMUST00000006378 2 2 3 80 4 140966690 140967313 TTCAACAATGAACAGGAGAC 58 140966629 140966648 GATCTCTGGTAAGTCAAAGG 57 NA Mus musculus 50 Cbfa2t3 ENSMUSG00000006362 ENSMUST00000006525,ENSMUST00000064674 3 2 2 100 8 125158319 125158857 CTCAGCTAGATGTTCACCG 59 125157386 125157404 CTTCACCTCATTCACAGCT 59 NA Mus musculus 50 1110036O03Rik ENSMUSG00000006931 ENSMUST00000066489,ENSMUST00000107402 2 2 2 80 11 100273089 100273108 CTGGTATATTACCGCTTCCA 58 100272497 100273046 GTAGAGCATAGCTTCCTCC 58 NA Mus musculus 50 Tgfbr1 ENSMUSG00000007613 ENSMUST00000007757,ENSMUST00000044234,ENSMUST00000107725 2 3 3 81 4 47409385 47409404 GAGGCAGAGATTTATCAGAC 57 47409448 47415683 TCCCATTGTCTTTGTTGTC 57 NA Mus musculus 50 Cav1 ENSMUSG00000007655 ENSMUST00000115456,ENSMUST00000115455,ENSMUST00000007799,ENSMUST00000115454,ENSMUST00000115453 1 5 5 60 6 17289365 17289384 ATCTACGTCCATACCTTCTG 58 17289406 17289425 TGTTGCTGAATATCTTGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cox4i2 ENSMUSG00000009876 ENSMUST00000010020,ENSMUST00000109821 3 2 2 131 2 152586385 152586403 CAGTTCCATGAAACCTTCG 58 152586496 152590491 CTTAGGGAACACATAGACTCG 59 NA Mus musculus 50 4632411B12Rik ENSMUSG00000010453 ENSMUST00000115018 3 1 2 86 1 36402870 36404075 CTCCTGTCTCTTTGTTCCC 59 36402802 36402820 GAATGGTGCCTCTTAAGCT 59 NA Mus musculus 50 Lphn1 ENSMUSG00000013033 ENSMUST00000093386,ENSMUST00000116450 3 2 3 84 8 86446996 86450167 GTGTCCCTTACAAAGTGGA 59 86453402 86453420 GACTCATGTGTAGAGGTGG 59 NA Mus musculus 50 Klra17 ENSMUSG00000014543 ENSMUST00000087985 2 1 2 98 6 129822274 129822295 AGGAGATGATCTTCTGAAATCC 59 129815778 129822215 GAAGGAATTTCTGGGTGCT 59 NA Mus musculus 50 5930434B04Rik ENSMUSG00000015488 ENSMUST00000114007,ENSMUST00000114006,ENSMUST00000114004,ENSMUST00000015632,ENSMUST00000114005,ENSMUST00000114003 3 6 6 95 2 26869675 26871011 GTGTGGATGATCATGAACG 58 26871070 26871088 AACCTTCTCAGCTACTGTG 58 NA Mus musculus 50 Cmah ENSMUSG00000016756 ENSMUST00000110390 1 1 3 108 13 24527550 24531003 GTACAAAGAGGAATGGAAAGC 59 24531073 24531091 AAACGGACAGTAGATTCGG 59 NA Mus musculus 50 Nbr1 ENSMUSG00000017119 ENSMUST00000103099,ENSMUST00000103098,ENSMUST00000107208,ENSMUST00000107212,ENSMUST00000071537,ENSMUST00000107219,ENSMUST00000093932,ENSMUST00000107203 2 8 11 82 11 101433815 101433835 CTTTAATAGAGAAGCCAGGCT 59 101433879 101434132 TACAGTGGAATCAGGAGGT 59 NA Mus musculus 50 Plxdc1 ENSMUSG00000017417 ENSMUST00000107565,ENSMUST00000017561 1 2 3 81 11 97789779 97793534 CCTCACCACAGAAGATGAC 59 97787256 97787274 CTTGGACTTCGGAGATGAG 59 NA Mus musculus 50 Lsp1 ENSMUSG00000018819 ENSMUST00000105968,ENSMUST00000018963,ENSMUST00000105967,ENSMUST00000038946,ENSMUST00000105966 2 5 5 80 7 149675871 149675889 AGTACCAAGACTCTTTGGG 58 149675933 149676261 AGCTACTATATCCTGGCAG 57 NA Mus musculus 50 Hdac2 ENSMUSG00000019777 ENSMUST00000019911,ENSMUST00000105510 1 2 2 84 10 36711629 36711647 TTATACAACAGATCGCGTG 57 36711694 36713422 ACCAATATCCCTCAAGTCTC 58 NA Mus musculus 50 Gopc ENSMUSG00000019861 ENSMUST00000105475,ENSMUST00000020008 2 2 2 83 10 52073182 52073200 AAACTGTCATCAGAGCCTG 59 52070487 52073136 TCAAAGAGTCTTGATCGTGG 59 NA Mus musculus 50 Rfx4 ENSMUSG00000020037 ENSMUST00000060397,ENSMUST00000095388,ENSMUST00000020226 1 3 3 80 10 84307042 84307061 GACTCCATCCTCTACAAAGC 59 84307104 84321254 CACCTGAGTTAAGCTGTCC 59 NA Mus musculus 50 Tcfe2a ENSMUSG00000020167 ENSMUST00000105344,ENSMUST00000105343,ENSMUST00000105342,ENSMUST00000105346,ENSMUST00000105345,ENSMUST00000020377,ENSMUST00000105341,ENSMUST00000020379,ENSMUST00000105340,ENSMUST00000105339 1 10 10 80 10 79876078 79877920 CGACTCCTATAGTGGACTC 57 79876016 79876034 TCCTCATCCTCTTTCTCCT 58 NA Mus musculus 50 4930415F15Rik ENSMUSG00000020191 ENSMUST00000020410,ENSMUST00000109678 3 2 2 81 11 11395444 11396407 ACATTCCTCTGTATACTGGT 57 11396451 11396469 GCCACAGACTTGATATCTC 57 NA Mus musculus 50 Cpeb4 ENSMUSG00000020300 ENSMUST00000093220 1 1 4 134 11 31773371 31773389 GAAGATAGCTTGAACAGGG 57 31789931 31820419 TGAAGACTGACCTTTAATGG 57 NA Mus musculus 50 Ube2b ENSMUSG00000020390 ENSMUST00000020657,ENSMUST00000109086 1 2 2 80 11 51802194 51804906 TCATCCAAATGTGTATGCTG 58 51802133 51802152 GAAGAGACATCATATGTGGG 57 NA Mus musculus 50 Btg2 ENSMUSG00000020423 ENSMUST00000020692 1 1 1 64 1 135974260 135974278 CATTACAAACACCACTGGT 57 135974214 135974232 ATACGGATACAGCGATAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Psmd12 ENSMUSG00000020720 ENSMUST00000106752 3 1 3 89 11 107357071 107364941 TCTGTGGATGTATGGACCA 59 107364994 107365012 TCCAATCTCCCTAGAAGCA 59 NA Mus musculus 50 Exoc7 ENSMUSG00000020792 ENSMUST00000021147,ENSMUST00000106413,ENSMUST00000106411,ENSMUST00000106409,ENSMUST00000106408 2 5 6 98 11 116166357 116167714 CACTAGGAACATGGTGTCC 59 116166277 116166295 TGTAGGTTCTCTGTCTGCT 59 NA Mus musculus 50 Gcn5l2 ENSMUSG00000020918 ENSMUST00000006973,ENSMUST00000103118 2 2 3 82 11 100572209 100572463 CATTGAACAGGGTGTACTG 58 100572145 100572163 AGAGCTCAAACATTGTCTG 57 NA Mus musculus 50 Trim9 ENSMUSG00000021071 ENSMUST00000081485 2 1 3 97 12 71352012 71352030 GATGTTAGGGAAGGACGAC 59 71349404 71351951 CTCCTTCAGTTCTGTTGGT 59 NA Mus musculus 50 Rtn1 ENSMUSG00000021087 ENSMUST00000078505,ENSMUST00000101331,ENSMUST00000021497 1 3 3 90 12 73317902 73317920 TGTGTACGTTAAGCACCAG 59 73313552 73317763 TTTAGCCTGGATCTTTGCC 59 NA Mus musculus 50 Lrrc16 ENSMUSG00000021338 ENSMUST00000110400 2 1 7 81 13 24156479 24156497 GGTAGAGGATCTCACAGAG 57 24136940 24141521 CTTAGGAGTCATACTTGTACAG 57 NA Mus musculus 50 Serpinb9c ENSMUSG00000021404 ENSMUST00000021837,ENSMUST00000110284 2 2 2 80 13 33248856 33249585 ATATCTGAGGCAATTGGCT 58 33248794 33248814 TGGCTTCTTCAGGATATTGAG 59 NA Mus musculus 50 Fastkd3 ENSMUSG00000021532 ENSMUST00000051784,ENSMUST00000070793 2 2 4 114 13 68723776 68723794 AAAGATGCTACTGAGGCTC 59 68723872 68724065 TGACTCTTTACCTTGCAGC 59 NA Mus musculus 50 Ddx4 ENSMUSG00000021758 ENSMUST00000099166 2 1 2 81 13 113431429 113434728 CAGCTTCATCAGAAATGGA 57 113431366 113431385 CCTAAACTTCTTCCAGAAGG 57 NA Mus musculus 50 Dlg5 ENSMUSG00000021782 ENSMUST00000090398,ENSMUST00000073687,ENSMUST00000042009 3 3 3 83 14 24957884 24957902 GGACCTTTACTGGATGTGG 59 24957576 24957837 CTTCATCACCTCAAGTGGG 59 NA Mus musculus 50 Dab2 ENSMUSG00000022150 ENSMUST00000110664 2 1 4 164 15 6373098 6373116 GTCGTCGATCTTAAAGACC 57 6374246 6379310 GATATCTTTGCTTTCCAGCT 57 NA Mus musculus 50 Acin1 ENSMUSG00000022185 ENSMUST00000022793,ENSMUST00000111485,ENSMUST00000022794,ENSMUST00000111484 2 4 5 81 14 55263567 55263585 GTACAGGAACTTTGGTGGA 59 55263376 55263523 TCCTCTACTGTAGAGTACGT 58 NA Mus musculus 50 Lrp12 ENSMUSG00000022305 ENSMUST00000022916,ENSMUST00000110305 1 2 2 80 15 39707684 39707703 CATATGGACAGTTGATCGCT 59 39704415 39707641 AAACGGAAGCCTGATTAGG 59 NA Mus musculus 50 Tef ENSMUSG00000022389 ENSMUST00000109553,ENSMUST00000052561,ENSMUST00000023024 3 3 3 111 15 81645594 81645612 AGAGCTTGAAGGAAAGGAG 58 81645687 81651642 TTCCAAGGACGATTCTGTG 59 NA Mus musculus 50 Srl ENSMUSG00000022519 ENSMUST00000023161 3 1 2 114 16 4493875 4496417 ATTGCTCAATGGGAAGAGG 59 4493779 4493797 CTGAGTAATCGTCAGCTGG 59 NA Mus musculus 50 Aifm3 ENSMUSG00000022763 ENSMUST00000115685,ENSMUST00000100128 1 2 3 80 16 17506356 17506374 CTACGATCCCATCGTATCC 58 17506418 17507000 ATAAACAACTCCACCTCCC 58 NA Mus musculus 50 Stxbp5l ENSMUSG00000022829 ENSMUST00000114787,ENSMUST00000114782,ENSMUST00000114780,ENSMUST00000114781,ENSMUST00000096074,ENSMUST00000114790,ENSMUST00000114789,ENSMUST00000023526,ENSMUST00000114778,ENSMUST00000114775 3 10 10 85 16 37330033 37345164 ATACGAATACTTGGGAGGC 58 37329966 37329984 TTGATGAGGAATTGGAGCT 58 NA Mus musculus 50 Brd4 ENSMUSG00000024002 ENSMUST00000003726,ENSMUST00000114475 2 2 2 80 17 32366414 32366432 AGACACTATGGAAACACCA 58 32362649 32366373 TATAGTAATCAGGGAGGTTCAG 58 NA Mus musculus 50 Pja2 ENSMUSG00000024083 ENSMUST00000024889 3 1 2 137 17 64642357 64657972 ATGAAGACAGGGAACAGAC 58 64642238 64642257 CATCCAACATGAAAGCTTCC 59 NA Mus musculus 50 MGI:1928484 ENSMUSG00000024213 ENSMUST00000062397,ENSMUST00000025050 2 2 2 65 17 27718991 27719009 TGTATGTGCTCATCGTCAC 59 27717891 27718962 TCTTCCTTCCGATGTTCAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Col11a2 ENSMUSG00000024330 ENSMUST00000076926,ENSMUST00000114258,ENSMUST00000114257,ENSMUST00000114255,ENSMUST00000114252,ENSMUST00000087497,ENSMUST00000114250 1 7 7 91 17 34180328 34181768 ATGAAGTCTTTGAAGGCGA 59 34181823 34181841 ACATTCCAGATCCTTCTGC 59 NA Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000111659,ENSMUST00000111653 1 2 15 120 19 55985151 55985169 GCTAGGATGGTTAGTACCA 57 55987130 55991841 AGAGGACAGAAAGCTAGAC 57 NA Mus musculus 50 Dach2 ENSMUSG00000025592 ENSMUST00000113380,ENSMUST00000113378,ENSMUST00000067219,ENSMUST00000113381 2 4 6 110 X 110931343 110931361 CTACATCTGGTGACAGTGG 59 110933614 110949016 AGTTACCTCCTTGCATAGC 59 NA Mus musculus 50 Klhl4 ENSMUSG00000025597 ENSMUST00000040504,ENSMUST00000113370 2 2 3 123 X 111656686 111656706 AAGTATCATCTCTTGCCTGAG 59 111656791 111662973 TTGTAGTGGTGCCTTTAGC 59 NA Mus musculus 50 Rps6ka6 ENSMUSG00000025665 ENSMUST00000096348,ENSMUST00000082034,ENSMUST00000113428 1 3 6 94 X 108512256 108512274 TCCTGAGGAAATACTGCTG 58 108504818 108512198 AAAGCAAATCCTTTGCTCC 58 NA Mus musculus 50 Hspa4l ENSMUSG00000025757 ENSMUST00000077083,ENSMUST00000108086 3 2 2 83 3 40564768 40564786 TGTGTTTATCGACATGGGA 58 40564832 40570747 GTAGTAGCCAACACTTTCAG 58 NA Mus musculus 50 Mybl1 ENSMUSG00000025912 ENSMUST00000115468 3 1 2 86 1 9660084 9662301 GACATGCAGTCAAATTGTG 57 9660016 9660035 ATATCTTCTCGCTTGTTCAG 57 NA Mus musculus 50 Stau2 ENSMUSG00000025920 ENSMUST00000027052,ENSMUST00000054668,ENSMUST00000116646 1 3 5 80 1 16430450 16430469 ACTAGATCCAAAGCCATTCC 59 16384277 16430408 ATTGGGCAATGATACCTCTG 59 NA Mus musculus 50 Idh1 ENSMUSG00000025950 ENSMUST00000097709,ENSMUST00000027087 2 2 2 80 1 65207673 65207691 TGCATTGAGACCATTGAGG 59 65206117 65207629 AGAACGTTGTACATTGGGT 59 NA Mus musculus 50 Adam23 ENSMUSG00000025964 ENSMUST00000114103,ENSMUST00000114108,ENSMUST00000114107,ENSMUST00000087374,ENSMUST00000114101 2 5 6 80 1 63494508 63524258 CAGAAACACAATAAGGCTGTG 59 63524298 63524318 GAGGTCAAGAATGAACTTGGA 59 NA Mus musculus 50 Inpp4a ENSMUSG00000026113 ENSMUST00000027287,ENSMUST00000114933,ENSMUST00000058307 2 3 3 82 1 37449816 37449834 ATCAATGTGGAGAGCTTGG 59 37449880 37452927 GATCGAGGTAGACAGTCCT 59 NA Mus musculus 50 Eif4e2 ENSMUSG00000026254 ENSMUST00000113233,ENSMUST00000113232,ENSMUST00000027471,ENSMUST00000076362,ENSMUST00000113236,ENSMUST00000113231 3 6 6 90 1 89122497 89122515 AATCTCATCCTGGCTATGC 59 89122569 89122681 TAATGTCCTCCTGAAAGCG 59 NA Nonspecific Mus musculus 50 Niban ENSMUSG00000026483 ENSMUST00000097541 1 1 2 100 1 153561708 153561726 CATCTCTGCACAGGATGAG 59 153561788 153562805 CATATTTCTGAAGCTCCTCCT 59 NA Mus musculus 50 Mosc1 ENSMUSG00000026621 ENSMUST00000110992,ENSMUST00000048462 2 2 2 80 1 186611715 186619125 AAACACTGAAGAGCTACCG 59 186611653 186611673 CGAAGTATTGTCCAAAGATGG 59 NA Mus musculus 50 5730472N09Rik ENSMUSG00000026858 ENSMUST00000077977,ENSMUST00000100214,ENSMUST00000116543 1 3 4 91 2 30237583 30238493 TCAAAGAAACAGCCCTAGC 59 30239118 30239136 GAAATGGGAGATGAAGCCA 59 NA Mus musculus 50 Kynu ENSMUSG00000026866 ENSMUST00000028223 3 1 4 114 2 43535490 43536874 AAGAGGAGTCGTTTGTGAC 59 43536951 43536970 GAGTATGGAAGTGAGCAGTC 59 NA Mus musculus 50 Sec16a ENSMUSG00000026924 ENSMUST00000114082,ENSMUST00000091252 1 2 4 89 2 26285766 26285926 CCATTCACACCAGAGTCAG 59 26285695 26285713 TCACCATGAAATGAGCCTG 59 NA Mus musculus 50 Sdccag3 ENSMUSG00000026927 ENSMUST00000114102,ENSMUST00000114100,ENSMUST00000028293,ENSMUST00000077983,ENSMUST00000057204,ENSMUST00000114097 2 6 7 88 2 26240338 26240617 ATAAATTTGCTTCAGGCCC 58 26240268 26240286 TTCACTACAGAAAGGCTGG 59 NA Mus musculus 50 March7 ENSMUSG00000026977 ENSMUST00000067542 2 1 3 87 2 60081702 60081720 CAATTGAACCAAGCACTCG 59 60083312 60085557 TGGCTTATTACCGTTTCGA 58 NA Mus musculus 50 P2rx3 ENSMUSG00000027071 ENSMUST00000028465,ENSMUST00000111613 2 2 3 107 2 84864323 84864549 TCTGTCCAGAGAATGAGGA 59 84863695 84863713 GGACAGAGCTGTAGTTCAC 59 NA Mus musculus 50 D2Ertd391e ENSMUSG00000027244 ENSMUST00000076803,ENSMUST00000028678 1 2 2 80 2 91536124 91536142 TGGAAACTGAACTCAGCTC 59 91534150 91536080 TCACTTGGACAGTCTTGAG 58 NA Mus musculus 50 F2 ENSMUSG00000027249 ENSMUST00000028681,ENSMUST00000111335 3 2 2 85 2 91468984 91469320 ATTCCCGAACCAGATATGAG 58 91468918 91468936 CTCCCGCCAGTTATATCTG 59 NA Mus musculus 50 Mtch2 ENSMUSG00000027282 ENSMUST00000111468 3 1 5 96 2 90693011 90693187 TGAGAAACCTGAGATTTCTG 57 90693246 90693264 GATAACTCGGTCAAAGGAG 57 NA Mus musculus 50 Tyro3 ENSMUSG00000027298 ENSMUST00000110783,ENSMUST00000110786,ENSMUST00000028762,ENSMUST00000110781,ENSMUST00000028763 1 5 5 80 2 119638971 119638992 GAGATTTACAACTACCTCATCG 58 119639030 119642395 GTACATGAGATCATACACTTCC 58 NA Mus musculus 50 Ptpra ENSMUSG00000027303 ENSMUST00000077303 1 1 3 80 2 130357902 130358229 AAACATCCTGCCCTTTCTC 59 130358272 130358291 CTTTCTAGCAATGGAGTGGT 59 NA Mus musculus 50 Adam33 ENSMUSG00000027318 ENSMUST00000110232 1 1 4 130 2 130879229 130879247 CCACAATTCTCCTAGAGGG 58 130878878 130879136 ATTGCAAACCATTCTAGGTC 58 NA Mus musculus 50 Slc20a1 ENSMUSG00000027397 ENSMUST00000063202 2 1 4 102 2 129029805 129029823 TTCCTAATGGCTTACGAGC 59 129029889 129029997 CTAGGAGATTTCAGCCACG 59 NA Mus musculus 50 Tpd52 ENSMUSG00000027506 ENSMUST00000091355 1 1 4 99 3 8944678 8944696 GAAACTCTATCGCAAGCTG 58 8936467 8944615 GAATGGAGCGGATATTCAC 58 NA Mus musculus 50 Phactr3 ENSMUSG00000027525 ENSMUST00000108917,ENSMUST00000108916,ENSMUST00000103066,ENSMUST00000029031,ENSMUST00000108915,ENSMUST00000108914,ENSMUST00000103065 1 7 7 80 2 178066339 178067539 CAAGAAAGCTTAACCAGAGAC 58 178067578 178067599 CTTCCACATAATCACTGAAACG 59 NA Mus musculus 50 BC006779 ENSMUSG00000027580 ENSMUST00000108831,ENSMUST00000094203 3 2 4 122 2 180965835 180965944 TTCACAAGGCATCTACCAG 59 180965731 180965749 CTGTGAACTGTTTCTGCAG 58 NA Mus musculus 50 Src ENSMUSG00000027646 ENSMUST00000109533,ENSMUST00000029175,ENSMUST00000109531 1 3 5 81 2 157284297 157284315 ATGACTATGAGTCACGGAC 58 157284359 157288454 TCTCCCTCTGTGTTATTGAC 58 NA Mus musculus 50 Clcc1 ENSMUSG00000027884 ENSMUST00000106609,ENSMUST00000106611,ENSMUST00000106610,ENSMUST00000106613,ENSMUST00000029483 1 5 5 81 3 108473843 108473861 TAACATTGCTGGGATGGAG 59 108473905 108475748 TGTAAACCATTCCCAGAGAC 59 NA Mus musculus 50 Rrh ENSMUSG00000028012 ENSMUST00000078035 2 1 3 97 3 129516255 129518167 CAGATGGATATTTATGCAGGAC 58 129516179 129516197 CAACTGATGGTCAGGTACC 59 NA Mus musculus 50 Gpatch4 ENSMUSG00000028069 ENSMUST00000029707,ENSMUST00000050223 3 2 2 83 3 87856026 87858295 CAGAAGTTTGTGAAGACAGC 59 87858341 87858359 GTTGTCAACATCACTGCAG 59 NA Mus musculus 50 Map3k7 ENSMUSG00000028284 ENSMUST00000037607,ENSMUST00000080933 2 2 4 107 4 32104035 32104053 CAAAGAATCCATGGCAGTG 59 32104122 32106490 GCAACTAGTTCTTGCTTTCTC 59 NA Mus musculus 50 3110043O21Rik ENSMUSG00000028300 ENSMUST00000108127,ENSMUST00000108126 3 2 3 93 4 35140310 35140444 GAGGATGATACGCAGAAGG 59 35140235 35140255 TTATGTTAAGATCGCCCTCTG 59 NA Mus musculus 50 Npr2 ENSMUSG00000028469 ENSMUST00000030191,ENSMUST00000107877,ENSMUST00000107874 3 3 3 80 4 43653056 43653074 TCAGGAGTTTCAGAATCGC 59 43653117 43653418 ATAAGGTTCATCAGGGATGG 58 NA Mus musculus 50 Clta ENSMUSG00000028478 ENSMUST00000107845,ENSMUST00000107846,ENSMUST00000107851,ENSMUST00000107849,ENSMUST00000107847,ENSMUST00000078664 3 6 6 86 4 44031711 44032752 GAATACTACCAGGAGAGCA 57 44032802 44032820 GATACTTTCAGGCTCTGAC 57 NA Mus musculus 50 4931406I20Rik ENSMUSG00000028677 ENSMUST00000030439,ENSMUST00000102690,ENSMUST00000116298,ENSMUST00000097914,ENSMUST00000094853 3 5 5 97 4 116945917 116945935 ACATTTGAGGCTCTGAAGG 59 116945719 116945856 ATCGAGTAAGAGTCCATGC 58 NA Mus musculus 50 Kif17 ENSMUSG00000028758 ENSMUST00000105818,ENSMUST00000030539,ENSMUST00000105819,ENSMUST00000105820 1 4 5 93 4 137837373 137842356 ATCCGAGAGGAGTATGAGG 59 137842413 137842431 CAGTAATGTCCTCCTGCAG 59 NA Mus musculus 50 Eif4g3 ENSMUSG00000028760 ENSMUST00000058133,ENSMUST00000084214,ENSMUST00000105832,ENSMUST00000084215,ENSMUST00000105831,ENSMUST00000105830,ENSMUST00000105829 2 7 7 129 4 137652832 137653163 TACTGCATACCACAGTACC 58 137653255 137653274 CATAAGCATTAGCGAAGTCC 58 NA Mus musculus 50 Eif4g3 ENSMUSG00000028760 ENSMUST00000084214,ENSMUST00000105832,ENSMUST00000084215,ENSMUST00000105831 2 4 7 80 4 137757904 137759264 AGCAGCTATCATAGCTGAC 58 137759307 137759326 TACTTGAGTAAGATCGGCAC 59 NA Mus musculus 50 Eif2b4 ENSMUSG00000029145 ENSMUST00000077693 1 1 2 198 5 31494985 31495370 CGAAGAATCGAGATCCGAG 59 31494107 31494530 TTCTCTGATTGGGTCTTGC 59 NA Nonspecific Mus musculus 50 Tec ENSMUSG00000029217 ENSMUST00000071944,ENSMUST00000113594,ENSMUST00000113593 2 3 4 95 5 73170716 73173252 GATAAGTATGGGAGTGAAGGA 58 73165106 73165124 GGTATTTCTGCAGTACCAC 57 NA Mus musculus 50 Fbxl10 ENSMUSG00000029475 ENSMUST00000046073,ENSMUST00000086200 2 2 3 126 5 123382575 123382593 CGAATTTGAACTGAAGGGC 59 123371472 123382488 CAGTACATTCTTTACACCTTCC 58 NA Mus musculus 50 D5Ertd585e ENSMUSG00000029501 ENSMUST00000031474,ENSMUST00000086674 3 2 2 85 5 110667080 110667098 GATGACAACATGGACATGC 59 110667146 110670958 GTATCAAAGCCCACTTTGTC 59 NA Mus musculus 50 Sirt4 ENSMUSG00000029524 ENSMUST00000112066,ENSMUST00000112067 3 2 2 94 5 115929677 115929696 GTTGCTGCCTTTAATAGACC 58 115928409 115929620 CTTAGGGATCTTGAGCAGC 59 NA Mus musculus 50 Zfp12 ENSMUSG00000029587 ENSMUST00000075916,ENSMUST00000077485 1 2 2 94 5 143997984 144001639 AATACATCCTTAGGCCCAC 58 144001697 144001715 TATGTCGTCCTTTCCTCAG 58 NA Mus musculus 50 Slc13a1 ENSMUSG00000029700 ENSMUST00000031713 3 1 2 139 6 24100815 24100833 ACAATGTGCCTACATCCTC 59 24087170 24100712 AATAAGCAGAAGCCACCTG 59 NA Mus musculus 50 Cbx3 ENSMUSG00000029836 ENSMUST00000094623,ENSMUST00000031862,ENSMUST00000114446 3 3 3 80 6 51431808 51432487 TCATGAAGTGGAAGGACTC 58 51432530 51432549 CAATGACAATCTGAGGACAC 58 NA Nonspecific Mus musculus 50 5730419I09Rik ENSMUSG00000030279 ENSMUST00000070301,ENSMUST00000111758 2 2 3 81 6 143026833 143026851 TCTGGATAAACTGAGCAGC 59 143021202 143026790 ATTGAAGGGAATCTCCTTCAG 59 NA Mus musculus 50 D030011O10Rik ENSMUSG00000030313 ENSMUST00000111557,ENSMUST00000032458 1 2 2 80 6 149016624 149016643 TGGGATTAGAGAACCTAGTG 57 149003601 149016584 GCTGATAATCTTGTGAGTAGAG 58 NA Mus musculus 50 Dmpk ENSMUSG00000030409 ENSMUST00000032568,ENSMUST00000108475,ENSMUST00000108473,ENSMUST00000108472,ENSMUST00000108471,ENSMUST00000108474 1 6 6 82 7 19672977 19672995 GATGTTCTATGGGCAGACC 59 19673041 19673359 ACAAGTGTTCCCTGTAGTG 59 NA Mus musculus 50 Ttyh1 ENSMUSG00000030428 ENSMUST00000032594,ENSMUST00000079415,ENSMUST00000086397,ENSMUST00000108591 2 4 5 178 7 4084703 4084721 GTGTGAAGATGCCCTAGAG 59 4085002 4085280 CAAAGCGTTTGGATTCCTG 59 NA Mus musculus 50 Cask ENSMUSG00000031012 ENSMUST00000116623,ENSMUST00000115438,ENSMUST00000115432 3 3 9 150 X 13128102 13129510 AATTCTGTTTCGGACTTGC 58 13126385 13126404 TAATCTGGATGATGTCACCA 58 NA Mus musculus 50 Fgf13 ENSMUSG00000031137 ENSMUST00000101533 2 1 3 82 X 56504020 56504038 GTCACGAAATCTTCTGCTG 58 56385108 56385126 TATACCCTTAAGCTGAGGC 58 NA DesignNoJunction Mus musculus 50 Porcn ENSMUSG00000031169 ENSMUST00000077595,ENSMUST00000082320,ENSMUST00000089403,ENSMUST00000089402,ENSMUST00000115602 1 5 5 123 X 7776272 7776368 ATGTGGAACATGTCCTCAG 59 7775186 7775204 AAGTTTAAGGCTCGTACCC 59 NA Mus musculus 50 Slc38a5 ENSMUSG00000031170 ENSMUST00000115591,ENSMUST00000033512,ENSMUST00000115590 2 3 3 80 X 7856121 7856230 GTTTATTGGGTCCACTTCAG 58 7856272 7856291 ACCTCAGTAGGTACAATACG 58 NA Mus musculus 50 4930519F16Rik ENSMUSG00000031325 ENSMUST00000033688,ENSMUST00000061184,ENSMUST00000062544 1 3 3 81 X 100429603 100451177 CTGTCTGAAGAAATCGAAACC 59 100429542 100429563 GATTCTTTGACCATGTGAAGTG 59 NA Mus musculus 50 Mtm1 ENSMUSG00000031337 ENSMUST00000061970,ENSMUST00000025391,ENSMUST00000101502 2 3 7 145 X 68549516 68552754 CATATCAAGCTTGTTCTGACC 59 68552860 68552879 TAGAAGCTGTCCAACATCAG 59 NA Mus musculus 50 Gpm6b ENSMUSG00000031342 ENSMUST00000112235,ENSMUST00000112233,ENSMUST00000112224,ENSMUST00000112223,ENSMUST00000112227,ENSMUST00000112226 2 6 12 80 X 162821867 162821886 TTCTACATGTCCTATCACCT 57 162821929 162823337 CATCATGTAGATCAGCAGG 57 NA Mus musculus 50 Terf2 ENSMUSG00000031921 ENSMUST00000068388 3 1 3 92 8 109596479 109596497 AGTTTGGTTGGAAGAGGAC 59 109594452 109595779 TCTATGGTCCACTTCTGCT 59 NA Nonspecific Mus musculus 50 Fdx1 ENSMUSG00000032051 ENSMUST00000098775 2 1 2 62 9 51756703 51756721 AGAATGACATGCTTGACCT 58 51755280 51755298 AAATAGGTGGGTCTTCCAG 58 NA DesignNoJunction Mus musculus 50 Pias1 ENSMUSG00000032405 ENSMUST00000116566 2 1 2 124 9 62735173 62735191 AAGCTACATCAACACCTCC 59 62729061 62732587 GAACATGCACCTGATTGTC 59 NA Mus musculus 50 Atp2c1 ENSMUSG00000032570 ENSMUST00000112557 2 1 4 180 9 105337534 105338897 TACTGTTGGCTAAGGACAG 58 105335145 105337390 AAGGCAAGAACTCTGAGTC 59 NA Mus musculus 50 Ap4b1 ENSMUSG00000032952 ENSMUST00000076599,ENSMUST00000106824,ENSMUST00000106823,ENSMUST00000047285 2 4 4 83 3 103624370 103624604 TGCATTACTGCATAGAGGA 58 103624651 103624669 CAATGCCAACTAACAGGAG 58 NA Mus musculus 50 1810008A18Rik ENSMUSG00000032977 ENSMUST00000045454,ENSMUST00000099540 3 2 2 226 10 76960238 76960256 ATTGAAGCCATAAAGCTGG 58 76951210 76952752 TCTTCTTCAAGAAGCTGCT 58 NA DesignRelaxed Mus musculus 50 Jmjd2a ENSMUSG00000033326 ENSMUST00000097911,ENSMUST00000106406,ENSMUST00000106403 3 3 4 86 4 117811584 117814996 GACATAGTGAGTCAGGACTG 59 117811517 117811535 ATAGACTTGGCCATCTGTC 58 NA Mus musculus 50 Snap91 ENSMUSG00000033419 ENSMUST00000098495,ENSMUST00000074501 2 2 4 81 9 86704373 86710272 GGAAACAAATCTGGTGCTC 59 86701368 86701388 TAGCTGGTGTAGAATTAGGAG 58 NA Mus musculus 50 Tesk2 ENSMUSG00000033985 ENSMUST00000045542,ENSMUST00000106457,ENSMUST00000106456 2 3 5 89 4 116473833 116474057 AGCCTTATAATGAGAAGGCAG 59 116474108 116474126 GAAGATAGTCCGGATCAGC 59 NA Mus musculus 50 Scaper ENSMUSG00000034007 ENSMUST00000037408,ENSMUST00000098748 2 2 4 81 9 55685974 55685993 TGCAGAATTTAAACGAGAGG 58 55664602 55685932 GGCAATCTCATTAACCTTAGC 59 NA Mus musculus 50 Gpbp1l1 ENSMUSG00000034042 ENSMUST00000030460,ENSMUST00000054876,ENSMUST00000106475 1 3 3 95 4 116260037 116260055 AGTCTGCTTTCACCAATCC 59 116260114 116261199 TAGTACTGGAGGGACTCTC 58 NA DesignRelaxed Mus musculus 50 Nipsnap1 ENSMUSG00000034285 ENSMUST00000093371 1 1 3 141 11 4783256 4783390 TCTTCTATTCCAAGGACAGTG 59 4783493 4783741 TTCACGTTGTGAAACTGGA 59 NA Mus musculus 50 Wdr78 ENSMUSG00000035126 ENSMUST00000036451,ENSMUST00000116316 1 2 5 81 4 102732533 102732551 TCTTGGTGTCCATATCAGC 59 102722790 102732488 AGATGTTCGTGTCCATGAC 59 NA Mus musculus 50 Sec31a ENSMUSG00000035325 ENSMUST00000112922,ENSMUST00000112918 1 2 4 80 5 100819828 100819846 TTTGAGGAGGATTCTCGTG 58 100815211 100819784 CTCTTTAATGCGCTTCTGC 59 NA Nonspecific Mus musculus 50 Gtdc1 ENSMUSG00000036890 ENSMUST00000112810,ENSMUST00000049051 3 2 5 150 2 44490829 44607577 GATGTGAGCAGATTCATGC 58 44490697 44490715 TTGATTCACAGTTCTCCGG 59 NA Mus musculus 50 Xpnpep2 ENSMUSG00000037005 ENSMUST00000115000,ENSMUST00000077775,ENSMUST00000114998 3 3 3 81 X 45483228 45483248 CCTATACTCGAGTGCTAATGG 59 45483291 45483871 GCTTCTATCACTCTCCCTG 58 NA Mus musculus 50 Ss18 ENSMUSG00000037013 ENSMUST00000092041 3 1 4 221 18 14795120 14798778 TATTACCCTGATGGAAACTCC 58 14792100 14792118 CTGTGTTGGTCTATAGCCC 59 NA DesignRelaxed Mus musculus 50 D1Ertd53e ENSMUSG00000038174 ENSMUST00000097724 1 1 2 90 1 58591486 58592241 AAGAGAAGATGGCTTTGAC 57 58591414 58591432 TTTGATCCCTAGGTCAGTG 58 NA Mus musculus 50 Sp6 ENSMUSG00000038560 ENSMUST00000047997,ENSMUST00000107622 1 2 2 84 11 96883014 96883032 GACCTGGAAAGTGACAGTC 59 96883080 96883098 ACCACGATTCATAGTGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 AI481877 ENSMUSG00000038598 ENSMUST00000107547,ENSMUST00000107548 1 2 3 80 4 59062193 59062211 ATTTAATGACGTCGACGAG 57 59061935 59062150 TCATTTCCTCCTTAGAAGGT 57 NA Mus musculus 50 Ensa ENSMUSG00000038619 ENSMUST00000058230,ENSMUST00000037983 1 2 2 106 3 95430721 95430739 GCTAAAGGCCAAATATCCA 57 95432475 95432493 TGTTGTAGTCTCCTGAGTC 57 NA DesignNoJunction Mus musculus 50 1110039B18Rik ENSMUSG00000038828 ENSMUST00000114716,ENSMUST00000046349 1 2 2 113 5 31174520 31174884 TGGACAAGTTCCTAGAGCT 59 31174961 31174979 CTTTCAGTCCCTCAGTGAG 59 NA Mus musculus 50 Rreb1 ENSMUSG00000039087 ENSMUST00000110238,ENSMUST00000110237 1 2 5 96 13 37985767 37985785 AGTGTCACAGAGAATGGTG 59 37985845 37990290 CTTTCGTTTCCTGGTTCCT 59 NA Mus musculus 50 Vasn ENSMUSG00000039646 ENSMUST00000115855,ENSMUST00000038770 1 2 2 60 16 4649739 4649759 TCACTTGCAGAGTATACAGTC 59 4649779 4649799 TGACACAGATAGAATAGGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cpeb3 ENSMUSG00000039652 ENSMUST00000044716 1 1 2 83 19 37163073 37200835 TATGGCACTTAACAGTCGG 59 37163008 37163026 GACGATAAGGCCTGATCAC 59 NA Mus musculus 50 Arntl2 ENSMUSG00000040187 ENSMUST00000111639,ENSMUST00000080530,ENSMUST00000111636 1 3 4 92 6 146771204 146771620 CAAGCACAAAGCAGTTCTG 59 146771676 146771694 CTCTTCAGAGTCACGAAGG 59 NA Mus musculus 50 Nup88 ENSMUSG00000040667 ENSMUST00000035283 3 1 3 161 11 70758414 70758433 TCTTCAGCTTATCAGCAGAG 59 70758074 70758184 TGAGAAACCCTTTCCTCTC 58 NA Mus musculus 50 Erg ENSMUSG00000040732 ENSMUST00000113845 1 1 4 86 16 95600771 95600789 ACATCTGACTTCCGATGAC 59 95591655 95600723 GGCTCATAAGGTAAATCTGTG 58 NA Mus musculus 50 Dmxl2 ENSMUSG00000041268 ENSMUST00000047765 1 1 2 80 9 54245900 54245918 CATTCACTAGCAGCATCAC 58 54244159 54245856 ATTTCCTTCCGACTGACTG 59 NA Mus musculus 50 Dmxl2 ENSMUSG00000041268 ENSMUST00000047765 3 1 2 80 9 54325311 54325329 GCTTCATATGGGAATGCTG 58 54321708 54325267 CTGACACTTGAGTTGACTG 57 NA Mus musculus 50 Ddx24 ENSMUSG00000041645 ENSMUST00000044923,ENSMUST00000110001 1 2 2 107 12 104654472 104655496 TCTGCAAGACTGTGTTCTC 59 104649505 104649523 TAAATCTCTGAGGTGCGAG 58 NA Mus musculus 50 Pgm5 ENSMUSG00000041731 ENSMUST00000047666 3 1 2 80 19 24898832 24898853 ATCTTCGAATTGACCTATCTCG 59 24894727 24898792 CAATCTCCACTCTGAATGGT 59 NA Mus musculus 50 Myo15 ENSMUSG00000042678 ENSMUST00000071880,ENSMUST00000094135,ENSMUST00000108720,ENSMUST00000081823 2 4 5 80 11 60297301 60300657 TGCAGCAGATAAAGATCCT 58 60300701 60300719 TGGAGTTGTCATTCCTGAC 59 NA Mus musculus 50 Zfp536 ENSMUSG00000043456 ENSMUST00000073220,ENSMUST00000056338 1 2 3 129 7 38278851 38352844 CATCTTCCTCAGACATCGG 59 38278740 38278758 GAAGTCCGGAAAGTCTTCC 59 NA Mus musculus 50 Hjurp ENSMUSG00000044783 ENSMUST00000065420 2 1 3 96 1 90173802 90173820 GGACGTTAACCTACGAGAC 59 90164588 90171621 CTCTTCTCTGCGTTCTGAG 59 NA Mus musculus 50 Sh2d5 ENSMUSG00000045349 ENSMUST00000105822 1 1 5 80 4 137810206 137810224 GTGGATGACTTGGACACTC 59 137810266 137812645 CAGATACAGGATATGGACCTG 59 NA Mus musculus 50 Wnk1 ENSMUSG00000045962 ENSMUST00000088644 2 1 4 80 6 119902005 119906097 GGAACACAGGTAAGTACTCAG 59 119901945 119901964 CTGAGTAGGTTGTGACTGTG 59 NA Mus musculus 50 4732496O08Rik ENSMUSG00000046862 ENSMUST00000059790,ENSMUST00000037356 3 2 2 89 4 143007852 143008747 ACAGTTGTTCAGGTACCTG 59 143008799 143008818 TGGGACAAGGAATTCAAGTC 59 NA Mus musculus 50 BC049715 ENSMUSG00000047515 ENSMUST00000052702 1 1 1 99 6 136779498 136779516 TCAGTGGTTCTGACAACAG 59 136788322 136788340 AATAGTTTGGCAGCTTGGA 59 NA DesignNoJunction, InUTR Mus musculus 50 D8Ertd457e ENSMUSG00000047710 ENSMUST00000051870 1 1 1 60 8 13879219 13879239 AAAGTTCTTGTGGTAGTCCTC 59 13879258 13879279 TTCTGAGACTCCATAATGAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Flrt1 ENSMUSG00000047787 ENSMUST00000113383,ENSMUST00000058854 2 2 2 60 19 7170431 7170449 TCTCTGTTTACCCTCAAGG 58 7170389 7170407 AGTCAATGTTGGAGTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gjb1 ENSMUSG00000047797 ENSMUST00000052130 3 1 1 60 X 98579901 98579919 GGTGGACCTATGTCATCAG 59 98579942 98579961 ACATACATGAAGACAGCCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr157 ENSMUSG00000047875 ENSMUST00000094451 3 1 1 108 4 149473058 149473076 TCAGAAAGCACATCAACAG 57 149475756 149475774 AACTTCTTATCTGCCGTGG 59 NA DesignNoJunction Mus musculus 50 Bcl11b ENSMUSG00000048251 ENSMUST00000109891,ENSMUST00000066047 1 2 4 80 12 109227723 109227741 CCTGATGAAGATGACCACC 59 109155610 109227678 AAGGCTCATCTTTACCTGC 59 NA Mus musculus 50 Nupl2 ENSMUSG00000048439 ENSMUST00000049887 2 1 2 83 5 23681278 23681296 CAGACATTTCACCAGAGGA 58 23681340 23683830 GAACAGAGTTTAGATAGCTCTG 58 NA Mus musculus 50 Cxcr6 ENSMUSG00000048521 ENSMUST00000111444,ENSMUST00000049810 2 2 2 60 9 123719713 123719731 CTCAGGCATTATCAAGACC 57 123719752 123719773 CTTTAGAGATTTGTGCTTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Morc2b ENSMUSG00000048602 ENSMUST00000053896,ENSMUST00000087649 3 2 2 60 17 33275212 33275232 GCTCATCTACAAGTATTCTCC 57 33275172 33275192 CTTTGTAAACTGGGTCATCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Atxn7l2 ENSMUSG00000048997 ENSMUST00000090581 2 1 2 148 3 108006918 108008553 CCAGGTATGTACTTGTCAGTC 59 108006790 108006808 AGGATAGCTAGGGACAAGG 59 NA Mus musculus 50 Zfp644 ENSMUSG00000049606 ENSMUST00000086790 3 1 6 95 5 107065554 107065574 AACGTTATGTTAAGAGCAGC 58 107065478 107065497 ATAAATAACTGCTGTCTGCC 57 NA Mus musculus 50 A630018P17Rik ENSMUSG00000051224 ENSMUST00000112188,ENSMUST00000112187 2 2 3 195 X 162943758 162945648 AATAGCTGGACTTTCCAGG 58 162941281 162941299 GTTGCTCAATCAAGGAAGC 59 NA InUTR Mus musculus 50 Tubgcp6 ENSMUSG00000051786 ENSMUST00000109353 2 1 3 103 15 88935164 88935182 AGACCAGAAGTGCATTCAG 59 88934708 88934855 CTGTAGATGTGACCTGAGAG 58 NA Mus musculus 50 Tbc1d22a ENSMUSG00000051864 ENSMUST00000063414 1 1 2 138 15 86069716 86122574 AGACCTTGAGGAATTACGG 58 86130118 86130136 TTCCTTCTGTTTCCTCTGC 59 NA Mus musculus 50 A330008L17Rik ENSMUSG00000052479 ENSMUST00000064349 1 1 1 126 8 101940635 101940653 TTGGATAAAGACTGCTGGC 59 101945526 101945544 AAGGCAGTTTCCTACATGG 59 NA DesignNoJunction Mus musculus 50 Pcdh15 ENSMUSG00000052613 ENSMUST00000105430,ENSMUST00000105428,ENSMUST00000105427,ENSMUST00000105426,ENSMUST00000105425,ENSMUST00000092420,ENSMUST00000105424,ENSMUST00000064562 2 8 10 103 10 73409821 73409839 TGTCTGGAAGTGTTTACCC 59 73513851 73514360 TAGCTAGTTTGCAATCCTCG 59 NA Mus musculus 50 Cysltr1 ENSMUSG00000052821 ENSMUST00000113480,ENSMUST00000064892 2 2 2 130 X 103774201 103776202 AAATGTACCTCCAAGGCAC 59 103774089 103774110 AGTGGAGTATACTTGATTTCGG 59 NA InUTR Mus musculus 50 Rxfp2 ENSMUSG00000053368 ENSMUST00000065745,ENSMUST00000110496 2 2 2 80 5 150862694 150866258 CAACTTCAGTCTCTAGACCT 58 150866301 150866319 AGAAAGGTTCTTCATTGGC 57 NA Mus musculus 50 Camk2d ENSMUSG00000053819 ENSMUST00000066466,ENSMUST00000066452 2 2 9 101 3 126504672 126513568 GGGTAAAGGAGTCAACTGAG 59 126537517 126537536 CTTCAATCAGTTGCTCAGTG 59 NA Mus musculus 50 Pde5a ENSMUSG00000053965 ENSMUST00000066728 3 1 2 80 3 122542489 122542508 TGACGAATATAAGACCACAC 57 122542550 122543897 CCTCGTCTCTTAATGTACAG 57 NA Mus musculus 50 Fgfr3 ENSMUSG00000054252 ENSMUST00000067150,ENSMUST00000087820 2 2 4 122 5 34072972 34074772 ACTGTACTCAAGACTGCAG 58 34074858 34074876 AAACCCAATAGAATTGCCC 57 NA Mus musculus 50 Cadps ENSMUSG00000054423 ENSMUST00000112658,ENSMUST00000112657 3 2 3 144 14 13354821 13354839 GGGTCCAAGCTATGTACAG 59 13341737 13350326 CTATCTGCGTCCTTCAGTC 59 NA Mus musculus 50 Myh8 ENSMUSG00000055775 ENSMUST00000019625,ENSMUST00000042490,ENSMUST00000108686,ENSMUST00000108685 1 4 4 80 11 67092558 67093399 AAAGTGGAGCAACTCTCAC 59 67093443 67093461 CCATGTCCTCGATCTTGTC 59 NA Mus musculus 50 Trim34 ENSMUSG00000056144 ENSMUST00000060315,ENSMUST00000106848,ENSMUST00000106849,ENSMUST00000106847,ENSMUST00000072555 3 5 8 81 7 111408688 111408707 TATTCCAAGCTCCTGATCTG 58 111409010 111409414 GTGAAGTTGTCCCAGTAGG 59 NA Mus musculus 50 Car10 ENSMUSG00000056158 ENSMUST00000107859 1 1 5 87 11 93165887 93165907 GTCAACATAGAAACCAGTCAC 58 93165956 93229766 TAACACTGCAATCCTTCCT 58 NA Mus musculus 50 Las1l ENSMUSG00000057421 ENSMUST00000113864,ENSMUST00000079987 1 2 2 80 X 93148607 93148625 GATTGTTGAACTTCGCCAC 59 93147513 93148563 AGGACAAAGTAGCAACCTC 59 NA Mus musculus 50 Spop ENSMUSG00000057522 ENSMUST00000092765 3 1 3 96 11 95353086 95353106 ATACCGTTCTCTGTTCAGC 59 95353164 95353184 ATAAATGGAGTCTCCCAACTG 59 NA Mus musculus 50 Cacnb2 ENSMUSG00000057914 ENSMUST00000114718 1 1 6 80 2 14885540 14885559 GGAGGGAATTCATCATCCAG 59 14885602 14889860 TTCTGCTTCTGCAGATGAC 59 NA Mus musculus 50 Cds2 ENSMUSG00000058793 ENSMUST00000110158,ENSMUST00000103181 2 2 3 153 2 132089227 132118992 GGACAAGGAATCAGAGTCC 59 132119109 132120129 GTTCTTCCACCTTGAGGAC 59 NA Mus musculus 50 Lilrb3 ENSMUSG00000058818 ENSMUST00000078451,ENSMUST00000049747 3 2 2 80 7 3665819 3665839 ATAACCAGGAAAGGAGAACTC 59 3665461 3665704 CTCCACTGAAGCATATAGGC 59 NA Mus musculus 50 Nhs ENSMUSG00000059493 ENSMUST00000087085 1 1 2 87 X 158285136 158287414 GTAGAAAGTCCCACTCTCC 58 158285067 158285085 GTAGAGGGAACATTGTGGA 58 NA Mus musculus 50 Rp2h ENSMUSG00000060090 ENSMUST00000067979 2 1 5 184 X 19958856 19958874 TGCAGACAAAGGAAATGTC 58 19974423 19974529 TTAAGGGATCTTTGTCCCG 58 NA Mus musculus 50 Arrb2 ENSMUSG00000060216 ENSMUST00000079056,ENSMUST00000108568,ENSMUST00000102564,ENSMUST00000084954,ENSMUST00000102563 3 5 5 80 11 70253396 70253673 ATTCGATACCAACTATGCCA 58 70253715 70253734 TCATCCTTCATTCCCTTCAG 59 NA Mus musculus 50 Sntb1 ENSMUSG00000060429 ENSMUST00000110200 3 1 2 72 15 55623620 55623639 CAAGATGTGTTATGTCACCC 58 55622806 55622824 TATGAGGTCACTAGGATGG 57 NA DesignNoJunction Mus musculus 50 Dlgap4 ENSMUSG00000061689 ENSMUST00000000094,ENSMUST00000070782,ENSMUST00000109568,ENSMUST00000109567 3 4 6 86 2 156536990 156571581 GCTTCCAAGTTCATCATGC 59 156571631 156571649 ACTGAGATGAACGGTTTCG 59 NA Mus musculus 50 Scfd2 ENSMUSG00000062110 ENSMUST00000072857,ENSMUST00000113542 3 2 3 104 5 74632539 74632558 ATGATGTCTTCATGGCTCTC 59 74621465 74632472 TATAGGATGCCTGATGGGT 59 NA Mus musculus 50 Unc13c ENSMUSG00000062151 ENSMUST00000075245,ENSMUST00000093818 2 2 2 80 9 73328956 73331437 AAACCTTCCAGTTCATTCTG 58 73328895 73328914 CAAAGCAGTAGTCCTTAACC 58 NA Mus musculus 50 Nsl1 ENSMUSG00000062510 ENSMUST00000078259,ENSMUST00000076952 2 2 2 100 1 192893910 192893928 ATAGTAGATGTGGCAACCA 57 192893992 192895067 TGATACTGCTTCAGACTCG 58 NA Mus musculus 50 Klk1b27 ENSMUSG00000063177 ENSMUST00000079859 2 1 1 133 7 51309901 51309919 AAGAATTCTCAACCCTGGC 59 51310992 51311010 CAAACATTATGCTGGCTGG 59 NA DesignNoJunction Mus musculus 50 Eno1 ENSMUSG00000063524 ENSMUST00000080926 1 1 3 82 4 149616277 149618119 TCTGGTTAGCAAGAAAGTG 57 149618165 149618183 ATTTATTCTCTGTGCCGTC 57 NA Nonspecific Mus musculus 50 Akap13 ENSMUSG00000066406 ENSMUST00000098366,ENSMUST00000026851 2 2 4 90 7 82822290 82822308 CTCTTTCTCCTTTCCGGAG 59 82822362 82830017 CCTTCCAGACTGAAACTCC 59 NA Mus musculus 50 Nck2 ENSMUSG00000066877 ENSMUST00000114744,ENSMUST00000086421 3 2 2 177 1 43590576 43590594 ATGTGGAGCGTAAGAACAG 59 43610801 43610820 ATGTTGAGGTCATAGATGCG 59 NA DesignNoJunction Mus musculus 50 Pramel3 ENSMUSG00000067360 ENSMUST00000113176,ENSMUST00000087490 2 2 2 90 X 131843982 131844001 AACTGAGTCATATGAACCAC 57 131844051 131844649 GTAGATAGTACTCTCAGGACAG 58 NA DesignRelaxed Mus musculus 50 Cyp2d40 ENSMUSG00000068083 ENSMUST00000055721 2 1 1 60 15 82591596 82591615 ACTCATGATTCTGCATCCAG 59 82591338 82591356 TATGACCTCGTCGATTTCC 58 NA DesignNoJunction Mus musculus 50 D14Ertd668e ENSMUSG00000068245 ENSMUST00000095157 2 1 2 116 14 59971577 59971595 TTAAGAAATGCCAGGAAGC 57 59970047 59971498 CTTCATAGTCCGACTCTGAG 58 NA Mus musculus 50 Zfp467 ENSMUSG00000068551 ENSMUST00000114566,ENSMUST00000101443,ENSMUST00000114560,ENSMUST00000114559,ENSMUST00000114558,ENSMUST00000114561 1 6 6 81 6 48392727 48393418 CTCCTTGGGATTCTCAGTG 59 48392664 48392682 CTTCTCCTGGGCATTACTG 59 NA Nonspecific Mus musculus 50 Csde1 ENSMUSG00000068823 ENSMUST00000029446 3 1 2 100 3 102843953 102844369 AATGAACGGACAAGTTGTG 58 102844432 102844451 TACGTTCGTAGCATACACTC 59 NA Mus musculus 50 Hist4h4 ENSMUSG00000069274 ENSMUST00000102971 3 1 2 296 13 23643421 23643439 ATAACATCCAGGGCATCAC 59 23643143 23643161 TTTATGACAAAGTGGGTGG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Trcg1 ENSMUSG00000070298 ENSMUST00000093837,ENSMUST00000093836 3 2 2 109 9 57094106 57094433 CTATTCAGCAACGTGAAGG 58 57094506 57094524 GTTATATGATGGGCCAGGT 58 NA Mus musculus 50 Itgad ENSMUSG00000070369 ENSMUST00000033051 3 1 3 84 7 135326622 135326861 CAGAAAGTGGTAGACAGCA 59 135326909 135326927 GCATGTGAGTGTTGTAGTG 58 NA Mus musculus 50 Gm1673 ENSMUSG00000070858 ENSMUST00000114384,ENSMUST00000114383,ENSMUST00000094869,ENSMUST00000114382 2 4 4 139 5 34326725 34326743 CATTTGAATTCATGCAGCG 58 34327603 34327621 CAAAGATCTTCAGCGTCCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Pira7 ENSMUSG00000074417 ENSMUST00000108615,ENSMUST00000071671 2 2 5 143 7 3795778 3795943 GGTGACAGAAGACTACTGG 59 3795653 3795671 GAGAACTTCTGTGGTCCTG 59 NA Mus musculus 50 Gm826 ENSMUSG00000074623 ENSMUST00000109474,ENSMUST00000099127 3 2 3 91 2 160152854 160152872 TGGTCAAGAAACGACAGAG 59 160137784 160137802 CTCCAGAAATTCCTCAGGA 58 NA DesignNoJunction, InUTR Mus musculus 50 Sirpb1 ENSMUSG00000074677 ENSMUST00000108352,ENSMUST00000050623,ENSMUST00000108350,ENSMUST00000108349 1 4 4 80 3 15732459 15732942 CTCTGAGTTCATTCAAGTTCC 58 15732399 15732420 CAGGTGACAATTATCACATTCC 59 NA Nonspecific Mus musculus 50 Ywhaq ENSMUSG00000076432 ENSMUST00000110976,ENSMUST00000049531 3 2 3 94 12 21422723 21422741 CCTCTGACAAGAAGTTGCA 59 21404214 21422665 ATCCAACAATTCCAGGACC 59 NA Nonspecific Mus musculus 50 IGHG3 ENSMUSG00000076615 ENSMUST00000103422 1 1 2 114 12 114597964 114597982 ATACAGACAGTTGGTTGCA 59 114596396 114597886 TCATTCAGTTCCAGCTCAG 59 NA Mus musculus 50 0610010B08Rik ENSMUSG00000078881 ENSMUST00000108994,ENSMUST00000108993,ENSMUST00000108992 3 3 3 80 2 176277446 176277465 ATCCTTCTCAGAAGAGTCTC 57 176277505 176277731 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 NP_001092788.1 ENSMUSG00000079637 ENSMUST00000115190 2 1 1 60 X 34868528 34868546 CAGGAGAATTAAGTGCAGG 57 34868570 34868588 TTGCTGTTATCCATGAGGT 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 NM_177715.4 ENSMUSG00000048107 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-689-2 ENSMUSG00000076258 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 TRAJ11 ENSMUSG00000076918 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Oprm1 ENSMUSG00000000766 ENSMUST00000063036,ENSMUST00000052751 1 2 21 109 10 3516122 3516140 TTCCTCCACAATCGAACAG 59 3332488 3516049 GTTCCTCATTCCTCTGGTG 59 NA Mus musculus 50 Bcl11a ENSMUSG00000000861 ENSMUST00000109516,ENSMUST00000000881,ENSMUST00000109514,ENSMUST00000109512 3 4 4 105 11 24058345 24063157 CAGGGTATTTGTAAAGATGAGC 59 24063223 24063241 ATCCATGAGTGTTCTGTGC 59 NA Mus musculus 50 Ilf2 ENSMUSG00000001016 ENSMUST00000107354,ENSMUST00000001042 3 2 2 80 3 90291007 90291156 CCTAGAACAACAGGATATGGT 58 90291198 90291216 AGGATCTTCCTAAAGCCTC 58 NA Mus musculus 50 Csn3 ENSMUSG00000001622 ENSMUST00000001667 3 1 3 82 5 88359168 88359186 TGAGACTACTACAGTCCCA 58 88359231 88361393 GGTTCCAGACCTTTATTGTC 58 NA InUTR Mus musculus 50 Ykt6 ENSMUSG00000002741 ENSMUST00000002818 2 1 1 103 11 5862753 5864573 ATCATTCTGCACAACACCA 59 5864640 5864658 TAGAAGGCTTTCGACTGTG 59 NA Mus musculus 50 Mcm2 ENSMUSG00000002870 ENSMUST00000058011 1 1 1 86 6 88837014 88837032 AATGTAGACCTCACAGAGC 58 88836081 88836964 CATCTCATCCTGAACTGGA 58 NA Mus musculus 50 Chn2 ENSMUSG00000004633 ENSMUST00000046856,ENSMUST00000114402,ENSMUST00000114401,ENSMUST00000067741 2 4 4 80 6 54236110 54236128 ACTGGTGTGAATACTGTGC 59 54236170 54240278 GTACGTTTAACCCACAATCTG 59 NA Mus musculus 50 Cic ENSMUSG00000005442 ENSMUST00000094696,ENSMUST00000005578 1 2 2 80 7 26072336 26072778 GATGTCATTGCTGATGACAG 58 26072821 26072839 TCCACTTTCACTGTCAGTC 59 NA Mus musculus 50 Calcoco2 ENSMUSG00000006056 ENSMUST00000097162 3 1 2 153 11 95961680 95961698 CAGAGGGTCAATAAGACCT 57 95961251 95961563 AATAGGCCTTCACTTCCTC 58 NA Mus musculus 50 Neurl ENSMUSG00000006435 ENSMUST00000111808,ENSMUST00000111807 1 2 2 198 19 47314520 47314844 AAGTCAGGCTGAAGATCAC 59 47315006 47315024 CAGAAGGCAATGATGTTGC 59 NA Mus musculus 50 Prkag3 ENSMUSG00000006542 ENSMUST00000081636,ENSMUST00000113672 1 2 2 80 1 74788070 74791039 AATGAATCTGGTCAGGTCG 59 74787840 74787858 TAGGTGGTTGTAGGTTTGC 59 NA Mus musculus 50 Cyp27b1 ENSMUSG00000006724 ENSMUST00000006907 3 1 1 81 10 126486930 126487034 GCCTAGAAAGTATAGGCGC 59 126487079 126487097 AAGGTTTCTGTGTCAGGAG 59 NA Mus musculus 50 Cnp ENSMUSG00000006782 ENSMUST00000103120 1 1 1 100 11 100438131 100438149 AAAGAGTTCTGAGACCCTC 58 100438212 100440238 CTCCAGAAATAAAGTGTCGA 57 NA Mus musculus 50 Ceacam9 ENSMUSG00000007209 ENSMUST00000001984 3 1 1 109 7 17309283 17309302 TTAACACGGAAATGGAAAGC 59 17310588 17310606 AGAACCAGCTTCTGTTACC 59 NA DesignNoJunction Mus musculus 50 Tinf2 ENSMUSG00000007589 ENSMUST00000111342 2 1 3 97 14 56298552 56298927 CTAAGACTCCATCTCTGGC 58 56298473 56298491 TTTCTTAGCCTAGCTTGGT 58 NA InUTR Mus musculus 50 Fgfrl1 ENSMUSG00000008090 ENSMUST00000013633,ENSMUST00000112560 1 2 2 117 5 109134576 109134838 CTCACTGTATTACCAGACCC 59 109134918 109134936 CTAGGATGAAGACAGCACC 59 NA Mus musculus 50 Tnfrsf13b ENSMUSG00000010142 ENSMUST00000101103 3 1 3 108 11 60954431 60954449 GCACCTGTACAGACTTCTG 59 60954988 60960355 CTTAGCCTCAATCCTGGAC 59 NA Mus musculus 50 4632411B12Rik ENSMUSG00000010453 ENSMUST00000115018,ENSMUST00000010597 3 2 2 87 1 36422487 36424624 GAGAATACTATTGAGTCAGACG 57 36422421 36422439 TTCTTGCCTTCTGATTGTC 57 NA Mus musculus 50 Adssl1 ENSMUSG00000011148 ENSMUST00000109756,ENSMUST00000021726 1 2 2 87 12 113873719 113873737 ATAGGCGATGTGTATGGTG 59 113873785 113874614 CTCCAATTTCATTGATCTGCTC 59 NA Mus musculus 50 Rps5 ENSMUSG00000012848 ENSMUST00000108539,ENSMUST00000004554 1 2 2 80 7 13508368 13508386 GACATCAAGCTCTTTGGGA 59 13508428 13510758 CTTCACAGCAATGTAATCCTG 59 NA Mus musculus 50 Ptprs ENSMUSG00000013236 ENSMUST00000086828,ENSMUST00000067538,ENSMUST00000025037,ENSMUST00000113012,ENSMUST00000097302 3 5 5 130 17 56594397 56594416 AAGGATCAGATTGGAGTGTC 59 56593741 56594304 AAGTCAATGGTCTCGAAGC 59 NA Mus musculus 50 Bcas1 ENSMUSG00000013523 ENSMUST00000068137,ENSMUST00000109152,ENSMUST00000013667 3 3 3 81 2 170195980 170204232 TTGGAAGAAGTCAGTTAAGGAG 59 170191999 170192017 TACGGTCTCTACTGGTGAC 59 NA Mus musculus 50 Timm23 ENSMUSG00000013701 ENSMUST00000013845 2 1 1 61 14 33004559 33004577 TATGGTGACTAGGCAAGGA 59 33002429 33004534 TATAGAGCAAAGCCAGGGA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 St3gal1 ENSMUSG00000013846 ENSMUST00000092640,ENSMUST00000110074,ENSMUST00000063460 1 3 3 80 15 66938389 66939788 ATTCATATCTGTGATGAGGTGG 59 66938330 66938349 GTTGTTCTCCCAGTAATGGT 59 NA Mus musculus 50 Crebl1 ENSMUSG00000015461 ENSMUST00000015605 2 1 1 80 17 34785234 34785531 TCTTCCCAGATCTTCAGGT 59 34785574 34785593 AAAGATGTGAGGACTCTGAG 58 NA Mus musculus 50 Anxa9 ENSMUSG00000015702 ENSMUST00000015846,ENSMUST00000107183 3 2 2 80 3 95109831 95109849 GGACGTTCTTGAGTTTCAG 58 95106988 95109788 TATCATAGTCCACACCTTGG 58 NA Mus musculus 50 Ncf1 ENSMUSG00000015950 ENSMUST00000111275,ENSMUST00000016094 3 2 2 83 5 134701659 134702464 AACGTAGCTGACATCACAG 59 134701594 134701612 CATCTCTGTTCCCGAACTC 59 NA Mus musculus 50 Abca5 ENSMUSG00000018800 ENSMUST00000043961 1 1 1 80 11 110137818 110137839 GACTACTCATTACATGGAAGAG 57 110136719 110137777 CCAATACATCTTAGCTGCC 57 NA Mus musculus 50 Mb ENSMUSG00000018893 ENSMUST00000019037 1 1 1 122 15 76846493 76848016 AGTACCTGGAGTTTATCTCAG 58 76846391 76846409 CAATGTCATTCCGGAAGAG 58 NA Mus musculus 50 E2f2 ENSMUSG00000018983 ENSMUST00000061721 3 1 1 89 4 135736419 135736438 ATCTATGACATCACCAACGT 58 135736490 135737216 AAATAGTTCCCTGCCTACC 58 NA Mus musculus 50 Cops6 ENSMUSG00000019494 ENSMUST00000019638 3 1 1 90 5 138603605 138603973 ACACAGATCTTCCTGTCAG 58 138604374 138604392 AGAGTGTAAGTGAGCTCAG 58 NA Nonspecific Mus musculus 50 Ubb ENSMUSG00000019505 ENSMUST00000019649,ENSMUST00000108707 2 2 2 67 11 62365678 62365696 AAGACCATCACCCTAGAGG 59 62365727 62365745 TTATCCTGGATCTTGGCCT 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Katna1 ENSMUSG00000019794 ENSMUST00000019929 1 1 1 80 10 7481153 7482591 TACCAATGTATGCAGGGAC 59 7482635 7482653 AGGTTCCGGATTTCTTCTG 59 NA Mus musculus 50 Slc16a10 ENSMUSG00000019838 ENSMUST00000092566 3 1 2 86 10 39796429 39796447 AAGGAGACAACCTATGCAG 58 39776428 39796379 ATGGTTCATCAAGTGAACG 58 NA Mus musculus 50 Moxd1 ENSMUSG00000020000 ENSMUST00000095784 1 1 1 80 10 23972753 23972771 AAAGGCACAACATACTGGT 59 23972813 23999183 TATTGGCTCCACCTTTATCAC 59 NA Mus musculus 50 Gabrp ENSMUSG00000020159 ENSMUST00000020366 2 1 1 81 11 33467266 33467284 CCTCCATGAAGTCACAGTG 59 33463939 33467222 TGTTGTGATTCTAAGTGCGT 59 NA Mus musculus 50 2810021J22Rik ENSMUSG00000020491 ENSMUST00000108820,ENSMUST00000073924,ENSMUST00000093064 1 3 4 123 11 58690311 58692284 TGCTGTCCTTGAATCAGTG 59 58693431 58693449 CTCTTCATAGGCTGCAGAG 59 NA Mus musculus 50 Ccdc46 ENSMUSG00000020728 ENSMUST00000061287,ENSMUST00000106724,ENSMUST00000100297,ENSMUST00000106718,ENSMUST00000106715,ENSMUST00000106717,ENSMUST00000106714,ENSMUST00000106716 3 8 8 89 11 108669974 108669992 ATGAACTAGAAACCCGCTC 59 108670044 108717106 TGTACATTATCTGCTCCTGC 59 NA Mus musculus 50 Ccdc103 ENSMUSG00000020930 ENSMUST00000021307 3 1 1 91 11 102744444 102744462 GAAAGAGATTTGTGCCCTG 58 102744517 102745181 GAAGGGTGATTTCTCCTGG 59 NA Mus musculus 50 Acot3 ENSMUSG00000021228 ENSMUST00000021653 3 1 1 80 12 85397997 85398016 ACATGGACATTATCCACCTG 59 85398059 85399386 CTCCTGAACCTGTTACCTG 59 NA Nonspecific Mus musculus 50 Edn1 ENSMUSG00000021367 ENSMUST00000021796 3 1 1 84 13 42400726 42402152 GAAACTACGAAGGTTGGAG 57 42402200 42402218 GTCTCTATAGAGCTCAGCT 57 NA Mus musculus 50 Serf1 ENSMUSG00000021643 ENSMUST00000022145 3 1 1 81 13 100879019 100879037 AAGACCCAGGAAATTAGCA 58 100879082 100883933 TGATCTCTGAATCCCTCTG 57 NA Mus musculus 50 Scamp1 ENSMUSG00000021687 ENSMUST00000022197 1 1 1 84 13 95003091 95003109 TAATGTACCCAACACCCAG 58 95002124 95003043 CAAGGCATGTTCCTTTGTG 59 NA Mus musculus 50 Nkiras1 ENSMUSG00000021772 ENSMUST00000022294 3 1 1 90 14 19109240 19109258 GCAAGGTTGTCATTTGTGG 59 19109311 19110827 TCTTCCATCCCAATAGTGTG 59 NA Mus musculus 50 Ecd ENSMUSG00000021810 ENSMUST00000022344 2 1 1 80 14 21152671 21155300 CATGAAGTTGGCTCATGGA 59 21152609 21152627 GTCACAAGAGACTTCCTGG 59 NA Mus musculus 50 Oxnad1 ENSMUSG00000021906 ENSMUST00000022462 2 1 1 91 14 32914202 32914221 CCTGAGAAGATTTCTTGCAG 58 32914274 32915455 GTTATTCTTCCGTCTGTGAC 58 NA Mus musculus 50 Chat ENSMUSG00000021919 ENSMUST00000070125 2 1 1 112 14 33236566 33237350 CTGAAACATATGATGACAGGC 59 33236474 33236492 AGATGGCCTTGAGTTTCTG 59 NA Mus musculus 50 Lcp1 ENSMUSG00000021998 ENSMUST00000110915,ENSMUST00000022575,ENSMUST00000110916,ENSMUST00000110913 1 4 4 93 14 75608362 75610256 ACATCAAGGACTCCAAAGC 59 75610313 75610331 GACATGTCAATCACAACCG 59 NA Mus musculus 50 Uchl3 ENSMUSG00000022111 ENSMUST00000002289,ENSMUST00000066470 3 2 2 92 14 102065872 102066214 CAAGATGCACTTCGAATCAG 59 102066269 102066287 TTCTCCAGGAATTTGGCTC 59 NA Mus musculus 50 6030458C11Rik ENSMUSG00000022195 ENSMUST00000057256,ENSMUST00000022804 1 2 2 82 15 12745653 12745671 CAGTCTTTGCTGACTTGTG 58 12743997 12745607 AACTAGTGACTCCATCCCA 59 NA Mus musculus 50 Eif3e ENSMUSG00000022336 ENSMUST00000022960 3 1 1 121 15 43094870 43097055 CCAACCACAGTATCTTAATGC 59 43094769 43094787 TCACCAGATCTTTCAGCAC 59 NA Mus musculus 50 Sh3bp1 ENSMUSG00000022436 ENSMUST00000001226,ENSMUST00000109698,ENSMUST00000061239,ENSMUST00000109695 1 4 4 85 15 78738415 78738433 CTCTGTGTCCTCCATTCAG 59 78738481 78738794 TGAAGTTGATATCTCCAGGG 58 NA Mus musculus 50 Pdxdc1 ENSMUSG00000022680 ENSMUST00000115804,ENSMUST00000023361,ENSMUST00000115802 1 3 3 103 16 13872606 13876078 GTAATCAGCTTGGCTTACC 58 13869948 13869967 GATCAGTTTCTCGAGAAAGG 57 NA Mus musculus 50 Boc ENSMUSG00000022687 ENSMUST00000023370,ENSMUST00000114634 1 2 2 80 16 44491858 44491877 GAGATTGGATACTGGCTACC 59 44491458 44491818 AAGAAATACCTTTCTCTAGGCC 59 NA Mus musculus 50 Gsk3b ENSMUSG00000022812 ENSMUST00000023507,ENSMUST00000114750 2 2 2 80 16 38144529 38170758 AGCGATTTAAGAACCGAGAG 59 38170799 38170819 AGTAGAAGAAATACCGCAGTC 59 NA Mus musculus 50 Krt7 ENSMUSG00000023039 ENSMUST00000068904 2 1 1 80 15 101246701 101248755 TTGCTGAAGAAGGATGTGG 59 101248799 101248817 GATCTCATCCTGCAGACTG 59 NA Mus musculus 50 Galnt14 ENSMUSG00000024064 ENSMUST00000024858,ENSMUST00000112591 1 2 2 81 17 73875656 73884589 GGGTCAAAGAGGACTACAC 59 73875593 73875614 GCAGACTCAATATAGTTGAAGG 58 NA Mus musculus 50 Xdh ENSMUSG00000024066 ENSMUST00000097283 1 1 2 116 17 74284194 74285220 CCTTCCAAGGAAACCTCTG 59 74283711 74283729 GATTATCAGCTCCACGAGG 59 NA Mus musculus 50 Clps ENSMUSG00000024225 ENSMUST00000025062 2 1 1 110 17 28695779 28695797 AGTGTAAGAGCAGATGCTG 59 28695367 28695706 AGTAGATCCCATAGAGGGTC 59 NA DesignNoJunction Mus musculus 50 5133400G04Rik ENSMUSG00000024352 ENSMUST00000025209,ENSMUST00000096573 2 2 2 86 18 35820225 35820460 GAGAAGAAACTGGTGGAGG 59 35820157 35820177 CAGAGCAAACTGTAACTTCTC 58 NA Mus musculus 50 Rpp21 ENSMUSG00000024446 ENSMUST00000025319,ENSMUST00000077535 2 2 2 84 17 36392943 36392961 CAGAGATTCCTCAACGACC 59 36392732 36392895 ATGGATTGATGTCTGCCTG 59 NA Mus musculus 50 Camk2a ENSMUSG00000024617 ENSMUST00000102888 2 1 3 89 18 61119662 61119680 CATCCTCACCACTATGCTG 59 61123609 61129658 TCAGAAGATTCCTTCACACC 59 NA Mus musculus 50 1700025F22Rik ENSMUSG00000024728 ENSMUST00000078770 1 1 1 84 19 11216118 11216834 GGCAATATAAGAGTGGCAG 57 11216052 11216070 TCAGTTACTATGGATGCCA 57 NA Mus musculus 50 Lipa ENSMUSG00000024781 ENSMUST00000049572 1 1 1 80 19 34598024 34599240 CAACATGAATGTGACCGAG 58 34597962 34597981 ATATAGCCATCTCCTGTCAG 58 NA Mus musculus 50 Fasn ENSMUSG00000025153 ENSMUST00000055655 2 1 1 81 11 120681170 120681188 CTGTTAATTGGCTCCACCA 59 120680505 120681125 ATAACAGCACCTTGGTCAG 59 NA Mus musculus 50 Nnt ENSMUSG00000025453 ENSMUST00000109208,ENSMUST00000109206,ENSMUST00000109205,ENSMUST00000099149,ENSMUST00000069902,ENSMUST00000109204 1 6 6 80 13 120170666 120175400 AGGATTTGATACAAGAGCTG 57 120170605 120170624 GATTCCTTCAAGTCAACCTC 58 NA Mus musculus 50 Sec11a ENSMUSG00000025724 ENSMUST00000026818 2 1 1 80 7 88068031 88068051 CGAGGTCTCTATAAACAAGGA 58 88061103 88067990 AATGTAAGGAACAAACCCTC 57 NA Mus musculus 50 Rhot2 ENSMUSG00000025733 ENSMUST00000043897,ENSMUST00000115063,ENSMUST00000026830 1 3 3 81 17 25977509 25977609 ACAGGCTATCACAGTTACC 58 25977446 25977464 CACCTTACACATGAGAACG 58 NA Mus musculus 50 Hgs ENSMUSG00000025793 ENSMUST00000106205,ENSMUST00000106203,ENSMUST00000026900 1 3 3 103 11 120332824 120332842 ATCTTGTACCTGATCCAGG 58 120332909 120333926 AAGACATGTCCTTCTACCT 57 NA Mus musculus 50 Pftk2 ENSMUSG00000026023 ENSMUST00000036295 2 1 2 91 1 59358120 59367645 GAAGATCTGGGAGGTTCTG 59 59367700 59401106 CAAACAGAGACTCCTCTGG 59 NA Mus musculus 50 Ctdsp1 ENSMUSG00000026176 ENSMUST00000027367 2 1 1 137 1 74440410 74440429 CAGGACTCAGACAAGATCTG 59 74440646 74441228 CTTCAGCACATAGACCTGG 59 NA Mus musculus 50 Ankzf1 ENSMUSG00000026199 ENSMUST00000073236 3 1 1 80 1 75192514 75192737 GCTCTATAAGGATGTTCGCA 59 75192779 75192798 CGGAACAATACTGTTTCTGC 59 NA Mus musculus 50 Serpine2 ENSMUSG00000026249 ENSMUST00000027467 3 1 1 89 1 79798124 79799432 GTCCTACCCAAGTTCACAG 59 79798053 79798073 CTTTGATGGCTCAAACATCTC 59 NA Mus musculus 50 Pfkfb2 ENSMUSG00000026409 ENSMUST00000066863 3 1 1 90 1 132596611 132596629 GCAACATCCTCGTTATCTC 57 132595809 132596560 CTCAAGTATGGTAACTCATCTG 58 NA Mus musculus 50 Nmt2 ENSMUSG00000026643 ENSMUST00000081932 1 1 3 198 2 3224260 3224281 GATACTATGGAAGGTGAATGGA 59 3226873 3229736 TGACTTCATTCAATTTGGGC 59 NA Mus musculus 50 Fcgr2b ENSMUSG00000026656 ENSMUST00000027966,ENSMUST00000081103,ENSMUST00000097469 2 3 3 87 1 172906071 172906089 ACTGTCCATGTGTTCTCAC 59 172898357 172899614 TTGGAAGATCATGAGTCCC 58 NA Mus musculus 50 Tnfsf4 ENSMUSG00000026700 ENSMUST00000028024 2 1 1 89 1 163325839 163325857 TTCATCTATGTCTGCCTGC 59 163345133 163347088 ATCCTCACATCTGGTAACTG 58 NA Mus musculus 50 Fibcd1 ENSMUSG00000026841 ENSMUST00000028188 3 1 1 161 2 31672749 31672769 ACCTAGAAGACTTTGACAACG 59 31672182 31672200 TAAACCTCATGCCACTGTG 59 NA DesignNoJunction Mus musculus 50 Cybrd1 ENSMUSG00000027015 ENSMUST00000028403,ENSMUST00000112154 2 2 2 86 2 70975689 70976406 GTTCTTTGTCCTGAAACACC 59 70976455 70976473 AACACCAGAATCAGAAGGC 59 NA Mus musculus 50 Eif3j ENSMUSG00000027236 ENSMUST00000028668 2 1 1 60 2 121854639 121866901 GACGTGAAGGATAACTGGG 59 121866925 121866943 GTTTGACTTCTGCTTCCTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Pcna ENSMUSG00000027342 ENSMUST00000028817 2 1 1 137 2 132077085 132077103 CATTGGAGATGCTGTTGTG 59 132075620 132076984 ATCTCTATGGTTACCGCCT 59 NA Mus musculus 50 Rbm38 ENSMUSG00000027510 ENSMUST00000029014 2 1 1 99 2 172848394 172848412 CAAGCCTAGGAGCTTACAG 59 172859008 172859028 GTAGATGTAGTGAGGAGTCAG 58 NA DesignNoJunction Mus musculus 50 E2f5 ENSMUSG00000027552 ENSMUST00000029069 2 1 1 82 3 14588273 14588291 AATGTGATGGAAGACTCCA 58 14601038 14602657 AGTGTATCACCATGAAAGC 57 NA Mus musculus 50 Aadac ENSMUSG00000027761 ENSMUST00000029325 1 1 1 80 3 59842362 59842380 TAGATCCTAGGAGAGTCGG 58 59842423 59843414 CTTGTATAAGCTGTTGGGTC 58 NA Mus musculus 50 Serpini1 ENSMUSG00000027834 ENSMUST00000029423 2 1 1 80 3 75441862 75441880 CAAAGCTGTTCACAAGTCC 59 75441924 75444186 CTAATCGCAATCATTCCGG 58 NA Mus musculus 50 Stxbp3a ENSMUSG00000027882 ENSMUST00000102621,ENSMUST00000029481,ENSMUST00000090526,ENSMUST00000106596 1 4 4 82 3 108630018 108630501 GCGAATGGAAGATAATGCT 57 108629954 108629972 CTCCTCTAGAAGGTCTGTC 57 NA Nonspecific Mus musculus 50 Lrrc39 ENSMUSG00000027961 ENSMUST00000029573 1 1 1 80 3 116271715 116271733 AGCTGAAAGAGAAGGTGAC 59 116271777 116272929 AAGAAGGGAGAGTCTTCCA 59 NA Mus musculus 50 Efna3 ENSMUSG00000028039 ENSMUST00000029673 1 1 1 125 3 89120011 89120029 GTGTCTGAGGATGAAGGTG 59 89119480 89119738 TCAAAGTCTTCCAACACGT 59 NA Mus musculus 50 Calb1 ENSMUSG00000028222 ENSMUST00000029876 2 1 1 80 4 15826035 15826054 AGGACCTACTAGAGAAAGCA 59 15826094 15827928 CAAATAGTTTCAGCATGAGGTC 59 NA Mus musculus 50 Ccnc ENSMUSG00000028252 ENSMUST00000029916 2 1 5 80 4 21654995 21655013 CTGGTGCATTTGTATCAGG 58 21655057 21657556 AATCCACTGCAAATAGTGG 57 NA Mus musculus 50 Fktn ENSMUSG00000028414 ENSMUST00000098071 3 1 3 65 4 53733067 53737481 TATTTGTCTGCAAGGATCTC 57 53737509 53737527 GAAGTCCATAGAGGTCAGC 59 NA DesignRelaxed Mus musculus 50 Gtf3c2 ENSMUSG00000029144 ENSMUST00000101411,ENSMUST00000088010 2 2 5 103 5 31476214 31476232 CTAGATCAGCCAGAGTCTC 58 31475423 31476147 TATAGAAGTGCCACTTGGG 58 NA Mus musculus 50 Srd5a3 ENSMUSG00000029233 ENSMUST00000031143 2 1 2 60 5 76578917 76578935 CTACTATGTGCTTGTTGGC 58 76578957 76582550 CACATTCTTATCATCCATGGG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Cdc7 ENSMUSG00000029283 ENSMUST00000076467 1 1 3 147 5 107402905 107402923 TATCATGGAGTCGTTGGAC 58 107403034 107404516 ATTGCTTGATGAGCTTTCC 58 NA Mus musculus 50 Ppbp ENSMUSG00000029372 ENSMUST00000031319 2 1 1 83 5 91198139 91198159 TCCCATTCAATTCTATCTCCC 58 91198204 91198356 TCTTCAGTGTGGCTATCAC 58 NA Mus musculus 50 Brap ENSMUSG00000029458 ENSMUST00000031414,ENSMUST00000111765 1 2 2 80 5 122129867 122129886 AAGATCGTTCAGTACGAGTG 59 122129927 122132800 CAGGTACGAGTACTCTAACTG 59 NA Mus musculus 50 Zfp12 ENSMUSG00000029587 ENSMUST00000075916,ENSMUST00000077485 1 2 2 94 5 143997984 144001639 AATACATCCTTAGGCCCAC 58 144001697 144001715 TATGTCGTCCTTTCCTCAG 58 NA Mus musculus 50 Epo ENSMUSG00000029711 ENSMUST00000111038,ENSMUST00000031723 1 2 2 87 5 137925266 137925286 ACCCTTCAGCTTCATATAGAC 58 137924459 137925217 TCAATTCCTTCTGAGCTCC 58 NA Mus musculus 50 Add2 ENSMUSG00000030000 ENSMUST00000032069,ENSMUST00000032068 2 2 2 99 6 86036951 86036969 CAACTCCTCCAACATCTGG 59 86037030 86042831 CATCATGGAGAAGTTCATGGA 59 NA Mus musculus 50 Tmem43 ENSMUSG00000030095 ENSMUST00000032183 3 1 1 80 6 91428263 91428281 AGCATCCATAGTGTAGCTC 58 91428325 91428708 AGACAAGAGCTTGGAAGTC 59 NA Mus musculus 50 Vgll4 ENSMUSG00000030315 ENSMUST00000032459 2 1 1 166 6 114814080 114840635 TGAATAAGACTGTCAACGG 57 114813932 114813950 GTCACTGCTGTTCTTAGTC 57 NA DesignNoJunction Mus musculus 50 Timp4 ENSMUSG00000030317 ENSMUST00000032462 1 1 1 105 6 115197320 115197338 TCTGTGCAACTACATTGAG 57 115196487 115197251 ATAGCAAGTGGTGATTTGG 57 NA Mus musculus 50 Dyrk4 ENSMUSG00000030345 ENSMUST00000112234,ENSMUST00000078521,ENSMUST00000032495 2 3 3 83 6 126841700 126841718 AATGTGGTCCACATGAAGG 59 126840165 126841654 CTCATACAGGTTGATTCCCA 59 NA Mus musculus 50 Tead2 ENSMUSG00000030796 ENSMUST00000033060,ENSMUST00000107801 3 2 3 112 7 52472789 52472808 GATCATCCTGTCAGATGAGG 59 52473513 52474529 GAATATGGCTGGAGACCTG 59 NA Mus musculus 50 Ush1c ENSMUSG00000030838 ENSMUST00000009667,ENSMUST00000107685,ENSMUST00000078680,ENSMUST00000107683 3 4 4 80 7 53480797 53480923 CAAAGTGAGACACATCGGA 59 53480567 53480586 ACGAACTGATCCACATACTG 59 NA Mus musculus 50 Slc6a14 ENSMUSG00000031089 ENSMUST00000033414 2 1 1 80 X 21298769 21298788 TTTCAAAGTGTATTGCCGTG 59 21298830 21299553 ACAGCCAGTTACTATTGGTG 59 NA Mus musculus 50 Renbp ENSMUSG00000031387 ENSMUST00000116578,ENSMUST00000114379,ENSMUST00000033762,ENSMUST00000114377 2 4 4 89 X 71171609 71171627 GGGTTATAGTGACAGTGGG 59 71167761 71171557 TACTCAGGATCACGAAACTG 59 NA Mus musculus 50 Slc25a4 ENSMUSG00000031633 ENSMUST00000034049 1 1 1 136 8 47293853 47293871 ATGTGCACATTATCGTGAG 57 47292958 47293754 CGTGTACATAATATCAGCCC 57 NA Mus musculus 50 F11 ENSMUSG00000031645 ENSMUST00000034064 3 1 1 80 8 46328271 46328291 CTTCCAAAGGAGATAGAAACG 58 46327702 46328230 GTACTTCACCTCTTAGTGCT 58 NA Mus musculus 50 Pou4f2 ENSMUSG00000031688 ENSMUST00000034115 1 1 1 81 8 80959492 80959510 TCGTCTCCCAGAGTAAGAG 59 80959429 80959447 TTCATGGTGTGGTAAGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cog4 ENSMUSG00000031753 ENSMUST00000034203 2 1 1 80 8 113390560 113390578 AGCTCTAACATCGACTGTC 58 113390620 113392114 ACATAGAACATCCCTGAAGTC 59 NA Mus musculus 50 Pde4c ENSMUSG00000031842 ENSMUST00000110095,ENSMUST00000034307 2 2 2 91 8 73272407 73272813 ATGGTCATAGACATGGTGC 59 73272868 73272886 GTCACTTTCTTCGTCTCCA 59 NA Mus musculus 50 Cmtm3 ENSMUSG00000031875 ENSMUST00000034343 2 1 1 68 8 106869226 106869244 AATGAAGTGGCCAAATTCC 58 106869276 106870633 TTCTTCTGTCCTATGGGCT 59 NA DesignNoJunction Mus musculus 50 Car7 ENSMUSG00000031883 ENSMUST00000056051 2 1 1 81 8 107072340 107072847 GATTTAAGGACACCAAGGC 58 107072892 107072910 GGATAGGTCCAGTAGTGTC 58 NA Mus musculus 50 Vps4a ENSMUSG00000031913 ENSMUST00000034388 1 1 1 81 8 109564864 109564884 ACAACTCTACCTTCTTCTCTG 58 109564926 109566106 AGGTTCTTGACTAGCTTCTC 58 NA Mus musculus 50 Gnai2 ENSMUSG00000032562 ENSMUST00000055704 1 1 1 89 9 107518636 107518759 GAGGATGAGGAGATGAACC 58 107518565 107518583 GATGATGGAGGTGTCTGTG 59 NA Mus musculus 50 Fhl3 ENSMUSG00000032643 ENSMUST00000106199,ENSMUST00000038684 1 2 2 82 4 124382968 124382986 TGCTATGACAACACCTTCG 59 124383031 124383144 TCCTCATAGAACAGTTCCCT 59 NA Mus musculus 50 Oas2 ENSMUSG00000032690 ENSMUST00000053909,ENSMUST00000081491 3 2 2 80 5 121198594 121198614 TGTAGTACAAGTGTCTGTACC 58 121195852 121198552 TTCTCATTGGAGCGTAGAG 58 NA Mus musculus 50 Trib3 ENSMUSG00000032715 ENSMUST00000040312,ENSMUST00000099213 2 2 2 74 2 152165451 152165469 TCTTCAGCAACTGTGAGAG 59 152164368 152164386 CATCTGATCCAGTCATCAC 57 NA DesignNoJunction Mus musculus 50 Gas7 ENSMUSG00000033066 ENSMUST00000108681,ENSMUST00000041611,ENSMUST00000108682,ENSMUST00000108680 3 4 4 114 11 67416707 67416726 ACTATGTCAACACGACTACC 59 67443182 67456792 TATCCATTCACTGTTGTAGGC 59 NA Mus musculus 50 Pus7l ENSMUSG00000033356 ENSMUST00000049151 2 1 1 81 15 94362053 94362072 AGAGATTTGGGAAAGGACAG 59 94359955 94362010 TTTATGGCCTTCACCATCTC 59 NA Mus musculus 50 Cml2 ENSMUSG00000033634 ENSMUST00000045008 1 1 1 242 6 85818899 85819028 GACTGAATCATTCCAGTTGC 59 85818350 85818368 TGTCGGATGTGATAAGCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Arhgap27 ENSMUSG00000034255 ENSMUST00000107024,ENSMUST00000041385,ENSMUST00000107023 1 3 4 169 11 103201680 103201699 CAGTGTATGCCAATGTAGAG 58 103201530 103201548 TGTTTCAAAGGGTGACTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Flvcr2 ENSMUSG00000034258 ENSMUST00000040461 3 1 1 83 12 87127106 87127126 GATGCTTCCTACTTAAGTTCC 58 87127171 87137135 AGCATTCAGACCATAGGTG 59 NA Mus musculus 50 BC025575 ENSMUSG00000034685 ENSMUST00000049057 3 1 1 87 11 102300218 102300760 GATCTACTACTGCAGAAGACG 59 102300151 102300169 ATCTCGTTTGTTGTCCGAG 59 NA Mus musculus 50 Txndc13 ENSMUSG00000034723 ENSMUST00000038228,ENSMUST00000110120 1 2 3 104 2 134447163 134465469 TTCAAGAGCCAGGTTTGAG 59 134446373 134446391 CATAGATTCCTGGACCACG 59 NA Mus musculus 50 5830405N20Rik ENSMUSG00000034833 ENSMUST00000099102,ENSMUST00000042586 2 2 2 80 10 129793887 129793906 CCAGTTACTTGATCTTGGCT 59 129793949 129797711 TCTGAGATGCTTGAACTGG 59 NA Mus musculus 50 1110059E24Rik ENSMUSG00000035171 ENSMUST00000038830 2 1 1 63 19 21672805 21673246 CCGTTTAATAAAGAACCAGACG 59 21672763 21672781 GTCTTCTATGGCCAGAACC 59 NA DesignNoJunction Mus musculus 50 Lsm7 ENSMUSG00000035215 ENSMUST00000035775 3 1 1 132 10 80317388 80317407 ACATCGATAAGACCATTCGG 59 80315830 80316505 TACTGGTCATCAGGGTCTC 59 NA Nonspecific Mus musculus 50 1600014K23Rik ENSMUSG00000035491 ENSMUST00000048382,ENSMUST00000113988 3 2 2 61 X 82515330 82515348 CTCTACCTGTGCAACTTCC 59 82515373 82515391 TCCTTGAGGATCTCTACCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Alg8 ENSMUSG00000035704 ENSMUST00000098300,ENSMUST00000116289 1 2 2 80 7 104522248 104526622 GTATTATGAGGCAACTTCAGAG 58 104526663 104526681 GCAATATGTGATAAGGCGT 57 NA Mus musculus 50 Fbxo45 ENSMUSG00000035764 ENSMUST00000042732 3 1 1 176 16 32238635 32238653 GTGATTGGGATTGCTACGA 59 32233346 32238499 CTCTCCTATCTGATACTTTGGTG 59 NA Mus musculus 50 9130017N09Rik ENSMUSG00000035852 ENSMUST00000046833 3 1 1 128 10 79290639 79290657 TTCAGTGTCAGAATCACCA 58 79290748 79292148 ATACCTGCATACCACATCTC 58 NA Mus musculus 50 Hif1an ENSMUSG00000036450 ENSMUST00000040455 1 1 1 80 19 44643936 44643956 CGAAATGTGGTTGGTTATGAG 59 44643998 44644398 CTCTATATGGTGCCACCAG 59 NA Mus musculus 50 Tbc1d24 ENSMUSG00000036473 ENSMUST00000097376,ENSMUST00000040474 2 2 2 118 17 24319783 24320647 CCTAAGCAGGTTCTATTTCCA 59 24319445 24319463 ATTTAGTCCTCTCGCTCCA 59 NA Mus musculus 50 Sh3tc1 ENSMUSG00000036553 ENSMUST00000070203,ENSMUST00000037959 3 2 2 93 5 36046170 36048519 ATCTGGAGAGTCAGTTACAG 58 36046096 36046114 AACTCGTGGTAGATGACAC 59 NA Mus musculus 50 3321401G04Rik ENSMUSG00000036667 ENSMUST00000045054,ENSMUST00000045140 2 2 3 80 6 42629415 42636339 TACCCATCTTAGTTCGTTGTG 59 42629355 42629375 TGATGTCCAGGTCTATTATGC 59 NA Mus musculus 50 Psma8 ENSMUSG00000036743 ENSMUST00000040860 1 1 1 96 18 14885128 14889499 GCTAAAGCAGAAATATACCCAG 58 14889556 14889574 ATACAATCTTGGGATGCCA 58 NA Mus musculus 50 Edg7 ENSMUSG00000036832 ENSMUST00000039164 1 1 1 167 3 145904251 145947629 CAGTGATGACCGTCTTAGG 59 145947760 145947778 TGTACGAGTAGATGATGGG 57 NA DesignNoJunction Mus musculus 50 Cst11 ENSMUSG00000036958 ENSMUST00000028934 2 1 1 139 2 148596216 148596923 ATTATGAAGCAGGTGACAGG 59 148594510 148594528 ACTGAGAAGTAGCACTGGA 59 NA DesignNoJunction Mus musculus 50 Bcorl1 ENSMUSG00000036959 ENSMUST00000114972,ENSMUST00000037596 2 2 2 80 X 45746466 45753745 CTTTCTCAGTGATCACCTC 57 45753789 45753807 GAACTGCTGTAGAAATCCC 57 NA Mus musculus 50 Ninj1 ENSMUSG00000037966 ENSMUST00000049022 2 1 1 102 13 49289244 49289262 ATGATTTCGCCTTCTTCGT 59 49289328 49290275 AGGTCATACTTGACCAGGA 59 NA Mus musculus 50 A630055G03Rik ENSMUSG00000037991 ENSMUST00000037913 1 1 2 147 16 10886279 10886297 ATCATACAGCATGCTGGAG 59 10886405 10890518 CTCAAGATATCTGCATCTTGGA 59 NA InUTR Mus musculus 50 Scarf1 ENSMUSG00000038188 ENSMUST00000071964 1 1 2 120 11 75335691 75335709 TAAGAACGCCCTCATTGTG 59 75335793 75338884 ATAGGGACCATCTCTGTCC 59 NA Mus musculus 50 Serpinf2 ENSMUSG00000038224 ENSMUST00000108437,ENSMUST00000043696 2 2 2 87 11 75250082 75250238 CTGCAGAAAGGATTTCCCA 59 75250013 75250031 GCTTTCCAGTCAGTTTCAC 58 NA Mus musculus 50 Hoxa9 ENSMUSG00000038227 ENSMUST00000048680,ENSMUST00000114425 1 2 2 106 6 52174475 52175538 CCATCGATCCCAATAACCC 59 52174387 52174405 AAACTCCTTCTCCAGTTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tbkbp1 ENSMUSG00000038517 ENSMUST00000092755,ENSMUST00000107615,ENSMUST00000107614,ENSMUST00000066078,ENSMUST00000107613 3 5 5 103 11 97010328 97010347 GCTTCCCTCTGTATGAACTC 59 97010033 97010263 CTTACTCTTCTGCAACTCGT 59 NA Mus musculus 50 Susd4 ENSMUSG00000038576 ENSMUST00000048739,ENSMUST00000085724 1 2 2 129 1 184817655 184818909 CAAATCAGAACAAACGTGG 57 184819002 184819020 CTTGGTCTGGAACATTCTG 58 NA Mus musculus 50 OTTMUSG00000007332 ENSMUSG00000038578 ENSMUST00000107544,ENSMUST00000040166 3 2 2 81 4 59392517 59392535 CATAAGCATTTCTGCAGCC 59 59382496 59392475 TTCTAAGAGATCATCTTCAGGG 58 NA Mus musculus 50 1110008P14Rik ENSMUSG00000039195 ENSMUST00000048792 3 1 1 183 2 32234976 32234994 GAGAAGAATGACCACCTCC 59 32234811 32234829 GTAGTATCTACCCAGGCCA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Fut11 ENSMUSG00000039357 ENSMUST00000048016 2 1 1 190 14 21515459 21515478 CTTTGAGTGTTTCGTCTGTG 59 21515631 21517446 ACATTTCCTTCCAGCTGTC 59 NA Mus musculus 50 March4 ENSMUSG00000039372 ENSMUST00000047786 3 1 1 102 1 72493919 72499030 AAGAATCCTCTACAGTGGC 58 72493835 72493853 AAGAGATACTGGCGATGAG 58 NA Mus musculus 50 Lmbrd2 ENSMUSG00000039704 ENSMUST00000090380 1 1 1 80 15 9101925 9101944 AGTTTGTTCACACCTTTCAG 58 9101986 9104888 AGTACCACTCAACAGTAGGA 59 NA Mus musculus 50 Cited2 ENSMUSG00000039910 ENSMUST00000038107,ENSMUST00000105529 2 2 2 60 10 17444402 17444420 AGACACTGATTTCATCGAC 57 17444442 17444462 GTCCAAACCCATTTCTATCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Fmo1 ENSMUSG00000040181 ENSMUST00000111518,ENSMUST00000064350 1 2 3 80 1 164780244 164780263 CATCTTTGATGCTGTCATGG 59 164771186 164780201 GTAAAGCAGACTGGGAAGG 59 NA Mus musculus 50 4933426K21Rik ENSMUSG00000040649 ENSMUST00000079990,ENSMUST00000068242 1 2 2 133 6 122414220 122422568 AAGGAAATCTGGGTCTTCG 59 122414105 122414123 TCCCATCTTCTCTAGGTGG 59 NA Mus musculus 50 Cyp2b9 ENSMUSG00000040660 ENSMUST00000082214 1 1 1 81 7 26985872 26985890 TTGTCCCAATTGGTCTACC 59 26985935 26986123 TACACCTCAGTGTTCTTGG 58 NA Mus musculus 50 Eml2 ENSMUSG00000040811 ENSMUST00000048502 1 1 1 80 7 19777004 19777022 ATCCCACATCTACTTCTGG 58 19777065 19779374 TTTGGTTTCTCGTGTTTCTC 58 NA Mus musculus 50 2810422O20Rik ENSMUSG00000041396 ENSMUST00000045694,ENSMUST00000111490 2 2 2 60 1 165926686 165926704 CCCAGGTGTTTATGAAGGA 58 165926726 165926746 GTAAGTCAAGAGGTCAAAGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Prima1 ENSMUSG00000041669 ENSMUST00000074416 3 1 1 95 12 104440927 104440945 TGGTCTGGTGATCATTGTC 59 104435553 104440869 AGTGGTTTCCTCTTTATGGC 59 NA Nonspecific Mus musculus 50 S100a10 ENSMUSG00000041959 ENSMUST00000045756 2 1 1 147 3 93364960 93364978 CTTGACAAAGGAGGACCTG 59 93368235 93368254 TGATAGAAAGCTCTGGAAGC 59 NA DesignNoJunction Mus musculus 50 Ccdc115 ENSMUSG00000042111 ENSMUST00000042493 2 1 1 98 1 34495735 34495753 CTTCAGGGTGATCAAAGCT 59 34494664 34494682 AACTCTTTGGTCTTGGTGG 59 NA DesignNoJunction Mus musculus 50 Prox2 ENSMUSG00000042320 ENSMUST00000110249 2 1 1 88 12 86428499 86428872 GAATGACTTTGAGGTCCCA 59 86428429 86428447 AATCTTTCCCTGCCAAGAC 59 NA Mus musculus 50 Slc5a10 ENSMUSG00000042371 ENSMUST00000051552 1 1 1 80 11 61517879 61521304 ACTGACCAGGTTATTGTGC 59 61517817 61517835 GTAGCTGGCTAGAATGGAG 59 NA Mus musculus 50 Atpaf2 ENSMUSG00000042709 ENSMUST00000108721,ENSMUST00000045675 1 2 2 101 11 60217412 60217430 TCAAATCCATGTTGCTGAC 58 60215031 60217347 ACTTCTGGATCTGGTACTC 57 NA Mus musculus 50 Hebp1 ENSMUSG00000042770 ENSMUST00000045855 3 1 1 91 6 135103014 135105181 ACCAATGACAAAGGAGTCG 59 135102941 135102961 TTCAGTTTCTTCTGTAGGGAG 59 NA Mus musculus 50 Ccdc63 ENSMUSG00000043036 ENSMUST00000058960 1 1 1 80 5 122575046 122577427 CTGGATGATAAGATCGTTCAG 58 122574986 122575004 ATTATTGGCCTCTTGTGTC 57 NA Mus musculus 50 Il17re ENSMUSG00000043088 ENSMUST00000058548,ENSMUST00000062146,ENSMUST00000113073,ENSMUST00000101065,ENSMUST00000053569 3 5 5 110 6 113413982 113414001 TTATGAATTCCTTCTGCCCT 58 113414813 113415718 TCTGAGCCATAAGCTTCAG 59 NA Mus musculus 50 Upf2 ENSMUSG00000043241 ENSMUST00000060092 2 1 1 80 2 5909452 5909470 TGAACATGAACACAAAGGC 58 5909514 5924604 GTAGCAAATCCAACCTCTG 58 NA Mus musculus 50 Olfr571 ENSMUSG00000043310 ENSMUST00000061738 3 1 1 60 7 110057438 110057457 TACAGTGTCAAGATGAAGGA 57 110057397 110057415 CCTTTGTGGGTAGTAACCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nanp ENSMUSG00000043346 ENSMUST00000057074 1 1 1 60 17 91636625 91636645 GAACAGAAGGAAGAGAAACCA 59 91636667 91636685 CTCCAAGAAGATCACAGCA 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Lgals2 ENSMUSG00000043501 ENSMUST00000044584 2 1 1 90 15 78681757 78681775 CTGTAACACCAGTGAAGGT 59 78681572 78681704 GATGGTGATCTTGACCTCTG 59 NA Mus musculus 50 4930412F15Rik ENSMUSG00000043633 ENSMUST00000056474 3 1 1 81 4 43673570 43673588 GACTGTTTCCGGATAGGAG 59 43673343 43673528 CTGACAGATCTGAGATGATCTG 59 NA Mus musculus 50 Olfr159 ENSMUSG00000044801 ENSMUST00000053931 3 1 1 60 4 43783391 43783410 ACAGTGCAGATATCTTTAGC 57 43783350 43783369 AGTGATTGATGACATTGTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Shroom2 ENSMUSG00000045180 ENSMUST00000101141,ENSMUST00000062317 3 2 2 82 X 149053499 149053517 TACCTCCTAGAGGAAGCTC 59 149051890 149053453 TCCTGTTTCTTGTCCTCTG 58 NA Mus musculus 50 D830014E11Rik ENSMUSG00000045750 ENSMUST00000055994 3 1 1 149 5 106257746 106257764 CACTTCTCTGTGAGTCACC 59 106257877 106258281 ACATTTCTGCTCCCATTCC 59 NA InUTR Mus musculus 50 Ccdc42 ENSMUSG00000045915 ENSMUST00000092985,ENSMUST00000063006,ENSMUST00000102612 2 3 3 99 11 68408108 68408126 CTGAACCTCTTCCAGATCG 59 68408186 68411167 GTATAAACTGCTGGATCATGTC 58 NA Mus musculus 50 Pnlip ENSMUSG00000046008 ENSMUST00000057270 2 1 1 81 19 58755329 58755347 GATCAACCCAACTCTACCC 59 58755389 58756169 ACTACAGAAGTTGAACACTCTG 59 NA Mus musculus 50 AB041806 ENSMUSG00000046109 ENSMUST00000062902 2 1 1 60 4 137953168 137953186 TCACTCAGAACCTAGTGAC 57 137953210 137953228 CAAAGGTTGGAGGGAAGAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Olfr1389 ENSMUSG00000046575 ENSMUST00000052274 3 1 1 60 11 49243988 49244006 TTTCAATGCCAGTTTAGGG 57 49244030 49244048 CAGTTGAGGGAAATCAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 V1re9 ENSMUSG00000047031 ENSMUST00000058362 1 1 1 60 7 11165323 11165342 TGCTCTTCAGAATAATCCCA 58 11165282 11165300 ACACATAGAAGTGAGTCGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 B3gnt1 ENSMUSG00000047379 ENSMUST00000053705 2 1 1 60 19 5039106 5039125 CAGTATTTCGAGTTCTTCCC 57 5039148 5039166 GGAGTTGAGACTTTACCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mafa ENSMUSG00000047591 ENSMUST00000062002 1 1 1 265 15 75578251 75578269 GTTCGAGGTGAAGAAGGAG 59 75578004 75578022 TCCAGTACAGATCCTCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Agtr1a ENSMUSG00000049115 ENSMUST00000066412 1 1 1 81 13 30436881 30472780 CATCACCAGATCAAGTGCA 59 30472824 30472843 AGTAGAAGAGTTAAGGGCCA 59 NA InUTR Mus musculus 50 4930474N05Rik ENSMUSG00000049546 ENSMUST00000055320 1 1 1 81 14 36908669 36909589 GCTGTTCATGAGGTATCCA 59 36909634 36909652 GTGCAGGAAGTTACAGAGG 59 NA Mus musculus 50 H2afx ENSMUSG00000049932 ENSMUST00000052686 3 1 1 64 9 44143862 44143881 TTCTCTAGGAATACCTCCCG 59 44143908 44143926 TAGAACTCTTGTCCACAGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Lrrc25 ENSMUSG00000049988 ENSMUST00000052437 3 1 1 85 8 73142214 73142232 AATGTCTTTATTGGCCAGC 58 73144479 73144498 TTCATGTAGCAGTCACTGTC 59 NA DesignNoJunction Mus musculus 50 Nudt6 ENSMUSG00000050174 ENSMUST00000052645,ENSMUST00000108118 1 2 5 88 3 37311288 37311306 ACTGGTTGTACAAGATCGA 58 37304408 37308441 CTGTGTCTGCAATATCTTCTC 58 NA Mus musculus 50 Tmem37 ENSMUSG00000050777 ENSMUST00000056089 1 1 1 60 1 121964790 121964808 GTCCTTTCTTCAGTCTCCA 58 121964748 121964766 CAAAGAGATGATCCTCCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr866 ENSMUSG00000050803 ENSMUST00000062248 1 1 1 60 9 19832008 19832027 AAATGTGATGGCTTATGACC 58 19831967 19831986 AAGGACTGTGTAATGAAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pdik1l ENSMUSG00000050890 ENSMUST00000061234,ENSMUST00000105877,ENSMUST00000105876 2 3 4 128 4 133840254 133840272 CAGTATCAAGAGCCAACAC 58 133835015 133840163 AATGAAGTCTCTACAAGCTG 57 NA Mus musculus 50 Efcab5 ENSMUSG00000050944 ENSMUST00000108400 1 1 1 80 11 76931337 76931355 GTACTCTAGATGACGCTCC 58 76929781 76931294 CATCCACTACTGTAAAGCTG 57 NA Nonspecific Mus musculus 50 Nup160 ENSMUSG00000051329 ENSMUST00000057481 3 1 1 80 2 90542254 90542541 ACGACCATATCAGATGATGC 59 90542583 90542602 AACAGACTCTCCAATCATCC 59 NA Mus musculus 50 Pcdhb11 ENSMUSG00000051486 ENSMUST00000053073 1 1 1 60 18 37582118 37582137 TCAGGGTGATGGATTATCTC 58 37582160 37582178 AAGACGGATTTCTCCTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr697 ENSMUSG00000051591 ENSMUST00000050541 3 1 1 60 7 113884751 113884769 CCACATGCCTTCAAATGAG 59 113884709 113884728 AGTCATATGGGAAGAACAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Senp8 ENSMUSG00000051705 ENSMUST00000051039 2 1 1 60 9 59585576 59585597 CAATCAGATGTCTCACTATTGG 58 59585537 59585556 CAAACCCAATAATGTGGTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG328354 ENSMUSG00000051729 ENSMUST00000060526 3 1 1 130 14 14003181 14096532 GAACTAAAGGTGTTCAAGAAGC 59 13991557 13991575 TGTATGGCAACCATCAAGG 59 NA InUTR Mus musculus 50 1700025K23Rik ENSMUSG00000051736 ENSMUST00000063204 2 1 1 84 10 38840087 38840105 CTCTAGTGCTTCCTGTACC 58 38838798 38838817 AGTTATTGTCAGGCAGTGAC 59 NA DesignNoJunction Mus musculus 50 Cd209f ENSMUSG00000051906 ENSMUST00000078702 1 1 1 81 8 4103651 4103670 TACATGAAGTTCCTGGCAG 59 4103216 4103234 TCCGTCATTGTTAGGTTCC 59 NA Mus musculus 50 Zfp212 ENSMUSG00000052763 ENSMUST00000009411 1 1 1 114 6 47877040 47877058 GATGGAGTCTGTTTCTCGG 59 47877136 47879057 CAAGGACCTTCAGAGACAC 59 NA Mus musculus 50 Fate1 ENSMUSG00000053593 ENSMUST00000066116,ENSMUST00000114569 1 2 3 80 X 69233018 69233036 TGATGATGTCCAGCTTCAG 59 69233078 69233374 ATTATATCTGCCTCCAGACAC 59 NA Mus musculus 50 6230419C23Rik ENSMUSG00000054204 ENSMUST00000067087 1 1 1 128 12 31571952 31572050 AAACATCTCACAGGTCCTC 58 31574914 31574932 CAGCCGAGTAAGTAACCTG 59 NA Mus musculus 50 Akr1c20 ENSMUSG00000054757 ENSMUST00000080361,ENSMUST00000078239 3 2 2 84 13 4513562 4513581 GAGGTAGGATTAGCCATCAG 59 4511939 4513516 TTTGCCAAACCTTTGATGTG 59 NA Mus musculus 50 Aasdh ENSMUSG00000055923 ENSMUST00000069709 1 1 1 80 5 77317670 77317689 TGGTATCACAGAGGTATCCA 59 77317153 77317627 GATTCATGTTTCACGGCAG 59 NA Mus musculus 50 Fut2 ENSMUSG00000055978 ENSMUST00000069800 1 1 1 60 7 52906648 52906669 CATCTTTGTCTTTGTGACTTCC 59 52906609 52906627 TTGGAGCTTCACTATTCGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr283 ENSMUSG00000056184 ENSMUST00000057386 2 1 1 60 15 98209431 98209449 GTGATTTACCTCCTGACCC 59 98209389 98209407 GATCGACCTTAACCACCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr324 ENSMUSG00000056564 ENSMUST00000054683 3 1 1 60 11 58411173 58411191 GTTGTGACTCCAAAGATGC 59 58411213 58411233 ATGGGTAAGATATGACCTTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gulp1 ENSMUSG00000056870 ENSMUST00000074525 3 1 1 126 1 44765515 44801329 AATGCAAAGTTTCTTGGCAG 59 44811214 44811233 CTTTAGGAATCTTCTGGCCT 59 NA Mus musculus 50 Ugt2b37 ENSMUSG00000057425 ENSMUST00000075858 2 1 1 63 5 87679721 87680812 ACCTTTGCCTAAGGATATGG 59 87679677 87679695 AAAGACCACTACACCATGG 59 NA DesignRelaxed Mus musculus 50 Serpina3k ENSMUSG00000058207 ENSMUST00000043058 3 1 1 134 12 105581304 105581322 AAGTACACAGGAAATGCCA 59 105581420 105582352 TAGCTCCTCTATTTGGCTG 58 NA Mus musculus 50 Tessp3 ENSMUSG00000058398 ENSMUST00000077549 2 1 1 80 9 110731278 110731895 AGAACGAAATTGATGCAGG 58 110731939 110731957 TGTTACAGTGCTTCTGGAG 59 NA Mus musculus 50 Samd12 ENSMUSG00000058656 ENSMUST00000078673 1 1 1 93 15 53551290 53691667 ACAGCAAAGTCAGCTACAG 59 53551215 53551236 GATTTGGACAGTGTTTCTTCAG 59 NA Mus musculus 50 Olfr69 ENSMUSG00000058662 ENSMUST00000080910 2 1 2 166 7 110917156 110917176 CAAAGGCATTTGGTCTTAGAG 59 110916872 110916890 ACAGAAGGCATGAAGACTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Olfr331 ENSMUSG00000058807 ENSMUST00000081743 1 1 1 60 11 58315913 58315931 CCTGATCCTGCTGATACTC 58 58315871 58315889 GTACATTGGTATGTGGAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr952 ENSMUSG00000058856 ENSMUST00000073895 1 1 1 60 9 39233829 39233848 CCAATGGAAAGTGTCATCTG 58 39233788 39233808 GATCATGAGATTCAACACAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hnrpa3 ENSMUSG00000059005 ENSMUST00000111964,ENSMUST00000111962,ENSMUST00000090792,ENSMUST00000076974,ENSMUST00000111961 2 5 5 62 2 75501763 75503094 TTGGTGGAGGTAACTATGG 58 75503119 75503138 GCTGTCCACTATAATTTCCA 57 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000059459 ENSMUSG00000059459 ENSMUST00000076238 1 1 1 82 13 21571022 21571040 CTTTCACCACTAGAAGCCC 59 21570958 21570976 CAGAATGGCTAGAGAACCC 59 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Mus musculus 50 1110020P15Rik ENSMUSG00000059534 ENSMUST00000058407 3 1 1 115 11 4602182 4602202 CACAAGTATGAGAACAAGGAG 58 4602087 4602105 GGCAACTTGAAACTCATCC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Sip1 ENSMUSG00000060121 ENSMUST00000021379,ENSMUST00000072021 3 2 2 82 12 60117876 60117895 TGAAGGTTACTCTCCAACAC 59 60117938 60118170 TATGCTTGTGTACACTCTGTC 59 NA Mus musculus 50 V1rb2 ENSMUSG00000060151 ENSMUST00000071865 1 1 1 60 6 90022463 90022481 AGTTACTCCAGAGAAAGCA 57 90022421 90022440 TGATAAGAAAGGTTTCCCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 EG545758 ENSMUSG00000060204 ENSMUST00000031124 1 1 1 112 5 72973952 72977456 TACATCGTGAAGGTTTCCC 59 72973858 72973877 TAAACAGTTGTGGGAATGCT 59 NA Mus musculus 50 Chst8 ENSMUSG00000060402 ENSMUST00000078686 3 1 1 91 7 35533103 35533121 CCTCCAGGACCCTATAGAG 59 35461251 35461659 TCAAGTGGCTATCATGCTG 59 NA Mus musculus 50 Layn ENSMUSG00000060594 ENSMUST00000073452 3 1 2 68 9 50882001 50882019 AACAGAGCAATAACACAGC 58 50881598 50881969 CCCTAAACTGTGATGTGCT 59 NA DesignNoJunction Mus musculus 50 V1ra4 ENSMUSG00000060724 ENSMUST00000074881 2 1 1 65 6 89972607 89972625 GCTCATGACCTTCTTTGTG 58 89972654 89972672 AACATAGCTCTTGAGGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Prl7c1 ENSMUSG00000060738 ENSMUST00000072943 1 1 1 80 13 27866544 27868078 AAGATCTCACTTGAAGACTTCC 59 27866485 27866504 AGTCTCTAGGTGGTACAGTG 59 NA Mus musculus 50 Gmfg ENSMUSG00000060791 ENSMUST00000108292,ENSMUST00000078845 3 2 2 162 7 29226502 29226520 TGAGGAAATTTCGTTTCCG 58 29228285 29229886 CTGTAGACCACAAACCTGG 59 NA DesignRelaxed Mus musculus 50 Olfr1194-ps1 ENSMUSG00000060827 ENSMUST00000081697 3 1 1 70 2 88518263 88518283 CCCAAGATGATTATTGACCTG 58 88518315 88518333 AAGAGTTGTAACATGCACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Sfmbt2 ENSMUSG00000061186 ENSMUST00000114868,ENSMUST00000114867,ENSMUST00000114862,ENSMUST00000114861,ENSMUST00000114864,ENSMUST00000041105,ENSMUST00000116594 1 7 8 80 2 10314970 10314988 AACTCATCCTCCTCTTTGG 58 10315031 10323632 CAGGTTGGTATCTTCCTCTG 59 NA Mus musculus 50 NM_146484.1 ENSMUSG00000061501 ENSMUST00000080031 2 1 1 64 16 59186021 59186042 GCAAACTGATCTCTGAATGC 59 59185976 59185994 ACATTCCATAGTTGCACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1457 ENSMUSG00000061637 ENSMUST00000075170 2 1 1 60 19 13169589 13169607 ATTTCTTCTGCGACATTCC 58 13169547 13169567 TCACTGAAGTATCTGTCTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 V1rh5 ENSMUSG00000061829 ENSMUST00000074252 1 1 1 60 13 23127159 23127178 GTTATGCAACGTTTAGTCCC 59 23127201 23127219 CAACATTCAAACAGAAGCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cd200r2 ENSMUSG00000062082 ENSMUST00000102805 1 1 3 85 16 44909759 44909777 GAACAATGTGTCTGCTGTG 59 44909826 44914677 TGGTGGTACCTCTACTCAG 59 NA Mus musculus 50 Cnih4 ENSMUSG00000062169 ENSMUST00000111059,ENSMUST00000075968 1 2 2 85 1 183083927 183086000 TAAACAAGTGGGTGATCCC 59 183086049 183086067 AAGGAAGATGAACCAGTGC 59 NA Mus musculus 50 Erbb2 ENSMUSG00000062312 ENSMUST00000058295 3 1 1 84 11 98286104 98286122 AACAACCAAGAGGTCACAG 59 98286170 98286425 CCAGACCATAGCATACTCC 58 NA Mus musculus 50 Olfr1355 ENSMUSG00000062873 ENSMUST00000078414 1 1 1 60 10 78342201 78342220 TATGCAGACTGTATTAGCCA 58 78342243 78342261 GAAAGTTGTCCAGTTCTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1466 ENSMUSG00000062936 ENSMUST00000075868 2 1 1 60 19 13416460 13416481 GATGTTATTTACTCTTCAGCGG 59 13416499 13416520 TATCTCCTATTATGAGACCAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ing2 ENSMUSG00000063049 ENSMUST00000080353 1 1 1 60 8 48754409 48754430 CCGGAAAGATCTTCTAGAAGAC 59 48754370 48754388 GACATAAGTCACGGCTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A930013B10Rik ENSMUSG00000063109 ENSMUST00000075701 3 1 2 150 11 88927526 88927770 ATTTCCAGATCATTTGCCC 58 88928724 88928744 TAGTTCTTCTGGTGGTATCTC 58 NA Mus musculus 50 Olfr811 ENSMUSG00000063173 ENSMUST00000076437 1 1 1 63 10 129238673 129238691 GAAGCTTTCAAACATGTGC 58 129238628 129238647 GTCTAAACCTTGTCTCACTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Klk1b24 ENSMUSG00000063713 ENSMUST00000073713 1 1 1 85 7 51447002 51447115 CATTACACCCACGAAATGG 58 51447164 51447182 AGGGTTTGGTACAGTTCTC 58 NA DesignNoJunction Mus musculus 50 Magea6 ENSMUSG00000063728 ENSMUST00000112562 1 1 2 151 X 151359665 151360586 GAGTGTCAGGACTGAAGTC 59 151359532 151359550 TGTCTGATTCCTGTTGAGC 59 NA DesignNoJunction, InUTR Mus musculus 50 4930528G09Rik ENSMUSG00000064280 ENSMUST00000115245,ENSMUST00000035915,ENSMUST00000030552 3 3 3 90 5 20836361 20836381 CAATATTCAGTACAGGCTGAC 58 20827150 20828573 CTCTATTTCTCCTGGCTTAGG 59 NA Mus musculus 50 2410137M14Rik ENSMUSG00000064308 ENSMUST00000039846 3 1 1 81 17 37115488 37115611 CTGAAATGGAGTAAAGAGCC 58 37115426 37115444 AAACTGGAAGGAGAACCAG 59 NA Mus musculus 50 mmu-mir-30c-1 ENSMUSG00000065490 ENSMUST00000083556 3 1 1 60 4 120442189 120442207 AACATCCTACACTCTCAGC 58 120442147 120442166 AGAAGGAGTAAACAACCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000066092 ENSMUSG00000066092 ENSMUST00000084390 2 1 1 60 7 151949274 151949292 ACTCTGAAGATTGTCAGCC 59 151949316 151949334 ACTCAACCATGGAGTAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr519 ENSMUSG00000066239 ENSMUST00000084752 1 1 1 60 7 116037692 116037710 CTTCTGTTTCAGCACAGTC 58 116037650 116037668 CGCTTTCTCACTAGTCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Iqcf5 ENSMUSG00000066382 ENSMUST00000085113 3 1 1 60 9 106418086 106418105 AATAGTCAAACTGCAGTCCT 58 106418127 106418146 CAAACGACAGTATCGATGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mllt4 ENSMUSG00000068036 ENSMUST00000077439 3 1 1 80 17 13983576 13983596 CTACAGAGCGTACACATAAGG 59 13983637 13986124 TCTTCTGTTTCTGGATGACC 59 NA Mus musculus 50 Tlx2 ENSMUSG00000068327 ENSMUST00000089641 3 1 1 60 6 83018418 83018436 CAGATATCAAAGGACAGCG 57 83018376 83018394 CCACATTCTCTACTGCCAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Clk2 ENSMUSG00000068917 ENSMUST00000090927 3 1 1 85 3 88977391 88977409 AAGACAACAACTACCTGCC 59 88977458 88978129 ATCATGGAGGAACTTGACG 59 NA Mus musculus 50 Olfr338 ENSMUSG00000068950 ENSMUST00000091006 2 1 1 60 2 36232638 36232656 CTTCCATGGCATATGACAG 57 36232677 36232698 ATGATGGTGATATAGTGCAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sry ENSMUSG00000069036 ENSMUST00000091178 3 1 1 72 Y 1919313 1919331 GCTAAAGTGTCACAGAGGA 58 1919259 1919277 ACTGCAGAAGGTTGTACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ank3 ENSMUSG00000069601 ENSMUST00000092434,ENSMUST00000092431,ENSMUST00000054167,ENSMUST00000047061,ENSMUST00000092432,ENSMUST00000092433 2 6 7 80 10 69442182 69443030 TTCCATCAAGATCAGAGACAC 59 69443071 69443090 AATCCCTTTGTTGTCTTTGG 58 NA Mus musculus 50 C76566 ENSMUSG00000069920 ENSMUST00000093217 2 1 1 60 8 107777579 107777597 GTTTCTACCGAGAACTGGT 58 107777537 107777555 CACATAAGCCAGATGTCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Il18bp ENSMUSG00000070427 ENSMUST00000094134 3 1 1 123 7 109165356 109165375 ACTGTCTTAACTGGAAGCTC 59 109164904 109165270 TCAGAGTTCCATTCAGTGG 58 NA Mus musculus 50 Ankrd57 ENSMUSG00000071286 ENSMUST00000095658 1 1 1 60 10 58686262 58686281 GAGGAAAGGTCTCTTAGAGG 58 58686303 58686322 ATACATTGGACTTCGGTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm960 ENSMUSG00000071691 ENSMUST00000096325 3 1 1 195 19 4663565 4663585 GACTGTCTGGTTATAAAGCAC 58 4654184 4659436 CATTCAGTACCTCACATAGC 57 NA InUTR Mus musculus 50 EG546347 ENSMUSG00000071726 ENSMUST00000096371 1 1 1 60 X 89735441 89735459 GAGAGTGATGAACTGCCTC 59 89735483 89735501 CTTGGGTTCAGAAGTCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hsn2 ENSMUSG00000072808 ENSMUST00000101005 3 1 1 60 6 119912668 119912687 GAACCTATGGGACAAATCTG 57 119912627 119912645 TTTGAGAGGAATCACTGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000072833 ENSMUSG00000072833 ENSMUST00000101038 1 1 1 75 5 90807840 90807858 CTTTGTAGGACACGTGAGG 59 90807783 90807801 TGTCATCTTCTGAAGAGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073076 ENSMUSG00000073076 ENSMUST00000101409 2 1 1 61 6 49993402 49993421 GGAAACATCGTGACTCTAGG 59 49993360 49993378 AGCAATGCAAATTGCTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930428E23Rik ENSMUSG00000073094 ENSMUST00000101433 2 1 1 165 X 72395251 72406783 CAGACAAGTCTCAGGACTC 59 72394600 72394619 TCTATGAGGCTCTTCAAGTC 58 NA Mus musculus 50 Cacna2d1 ENSMUSG00000073202 ENSMUST00000101581 3 1 1 108 5 15880063 15880082 TCATGAAATGCTCATTGTGC 59 15880151 15880171 GTCCAGAGAACATAATAAGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073560 ENSMUSG00000073560 ENSMUST00000097572 3 1 1 61 1 135726587 135726607 AAAGCTACAAGAGACAGAGTC 59 135726630 135726648 CAAGCATGAGCATACAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073738 ENSMUSG00000073738 ENSMUST00000097824 1 1 1 60 1 9951092 9951111 TATTTGAAGAAAGGCTGGAG 57 9951051 9951069 TCATGTCTGTGCGAATAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ccl27 ENSMUSG00000073877 ENSMUST00000108018 2 1 3 61 4 42027849 42029063 CTAAGCAGAAGCAAGAAGC 58 42029088 42029106 ATAGAGCTGAGTACAGCAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074029 ENSMUSG00000074029 ENSMUST00000093527 3 1 1 62 9 119069922 119069943 ATTACCATACTGTCCTACAGTC 58 119069966 119069984 GAGAGGCTAGCATTCTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxw15 ENSMUSG00000074060 ENSMUST00000056745,ENSMUST00000098360 3 2 2 96 9 109457729 109457748 CTATGGATGTGTATGCATGG 58 109455275 109457670 TAAATGAAGCCGTACAGTG 57 NA Mus musculus 50 Il4i1 ENSMUSG00000074141 ENSMUST00000107890,ENSMUST00000033015 2 2 2 107 7 52093534 52093552 GACATCTACCAGATGGCAC 59 52094583 52094705 GAGGAGGTATTCCAGAAGC 59 NA Mus musculus 50 Klk5 ENSMUSG00000074155 ENSMUST00000048444 1 1 1 89 7 51102535 51102553 GAAATTGCTTGTGACTGTG 57 51102606 51102824 TTTCGGGAAGTTATTGTGG 57 NA Mus musculus 50 Ccdc61 ENSMUSG00000074358 ENSMUST00000098780 2 1 1 80 7 19476717 19476735 AGTCTACCACTCAAGAACG 58 19476514 19476676 AGCTGTACTCTTTAATAGGGAC 59 NA Mus musculus 50 OTTMUSG00000015750 ENSMUSG00000074736 ENSMUST00000109935,ENSMUST00000109934,ENSMUST00000099263 1 3 4 152 2 149725707 149756654 TGGAGAGTGACTACTCCAG 59 149756769 149828922 CTTTGTTTGTCTCATGGGAC 59 NA Mus musculus 50 OTTMUSG00000015747 ENSMUSG00000074738 ENSMUST00000099265 2 1 1 164 4 155069218 155069236 CTACATCACCGAGAACCTC 59 155069364 155069382 ATCCTAAAGAGGGAGAGGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 ENSMUSG00000074845 ENSMUSG00000074845 ENSMUST00000093297 1 1 1 60 10 82494324 82494342 GTCTTGGTCCTTAGACCAC 59 82494282 82494301 ACCATGAAACTTGTGAAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1164 ENSMUSG00000075136 ENSMUST00000099834 3 1 1 60 2 87933889 87933907 GGATGAATCCCAAACTCCA 59 87933847 87933865 TCAACAAAGGATAAGTGGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1095 ENSMUSG00000075171 ENSMUST00000099874 1 1 1 60 2 86691099 86691117 TGTCCATTTGTTATGGCAC 58 86691057 86691076 AGGGAATAGTTGGAACTAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rc3h2 ENSMUSG00000075376 ENSMUST00000112934,ENSMUST00000112936,ENSMUST00000100143 2 3 3 80 2 37233879 37233898 TTACCATACAACAGATCCCG 59 37233446 37233837 GGGACATAATCTGATACGCT 59 NA Mus musculus 50 IGKV4-73 ENSMUSG00000076544 ENSMUST00000103345 2 1 1 64 6 69147630 69147648 TCACAATCAACAGCATGGA 59 69147584 69147602 GTTACTACTCCACTGCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-7 ENSMUSG00000076687 ENSMUST00000103496 3 1 1 80 12 115776895 115776914 TTACTAGCTACTGGATGCAC 58 115776834 115776855 CACTGCTAGGATTAATGTATCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV8D-2 ENSMUSG00000076795 ENSMUST00000103605 3 1 1 60 14 53662376 53662396 AACTGTTGTACACTGGTACAG 59 53662415 53662436 TATTAAGATTATCAGGGCAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2AKE7_MOUSE ENSMUSG00000078129 ENSMUST00000104928 1 1 1 61 2 154378397 154378415 GTTACACAGCTCAAGAAGC 58 154378440 154378458 TCACAGATATCACCCTGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930504E06Rik ENSMUSG00000078645 ENSMUST00000015856 2 1 1 298 3 95087258 95087276 GAATCCTGAAGACTCTGGG 59 95087537 95088515 TCAAAGTTCCTCAAAGAGGT 58 NA DesignRelaxed, InUTR Mus musculus 50 Prkcc ENSMUSG00000078816 ENSMUST00000100301 1 1 1 80 7 3311211 3312651 ATCCATATTACTGTTGGCGA 58 3312694 3312712 CTTCAGTTTCACGTAGGGA 58 NA Mus musculus 50 Ifrg15 ENSMUSG00000079252 ENSMUST00000111754,ENSMUST00000097526 2 2 3 85 1 157888251 157898428 AAACAGAAATCGAGGTGTG 57 157898477 157898495 TTTATCTGGACCCAGTCAC 58 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 L1Md-Gf21 ENSMUSG00000079460 ENSMUST00000113417,ENSMUST00000113416 1 2 2 113 X 109354999 109355018 TGAATTCAAAGGAAGTGCAG 58 109356956 109356974 ATTACTCTTTGCCAGGCTC 59 NA DesignNoJunction Mus musculus 50 Xlr4a ENSMUSG00000079845 ENSMUST00000078775 3 1 2 169 X 70326116 70326820 TAACCCAGGAAACAATCTGG 59 70324340 70324358 AGTGGTCAACATTCCACTC 59 NA Nonspecific Mus musculus 50 Rbm35b ENSMUSG00000080204 ENSMUST00000116427,ENSMUST00000116426 1 2 2 81 8 108658558 108658576 GAATTCCATATGCAGCACC 58 108658218 108658513 TTTCTAGTCCCAAGTCCTG 58 NA Nonspecific Mus musculus 50 NP_001098104.1 ENSMUSG00000080257 ENSMUST00000116540 2 1 1 81 6 123343915 123343933 AGGGAAATCATTCTGTTGC 57 123336156 123343871 GATGCACTGATCCATATCTG 57 NA Mus musculus 50 Scmh1 ENSMUSG00000000085 ENSMUST00000000087,ENSMUST00000064991,ENSMUST00000106301 3 3 4 83 4 120187805 120187824 GCATTGACTGTGCTTATCAC 59 120187870 120189499 CAAACACGGCTGAAATGAC 59 NA Mus musculus 50 Car4 ENSMUSG00000000805 ENSMUST00000103194 3 1 2 138 11 84777875 84777893 CATCTAGCAAGGAGGACTC 58 84778101 84778230 ACTGTAGAGGTTGAATGGG 58 NA Mus musculus 50 Bcl11a ENSMUSG00000000861 ENSMUST00000109516,ENSMUST00000000881,ENSMUST00000109514,ENSMUST00000109512 1 4 4 93 11 23985643 24058266 CATAGCAGATAAACTTCTGCAC 59 24058320 24058338 ATATTCTGCACTCATCCCG 59 NA Mus musculus 50 Uhrf1 ENSMUSG00000001228 ENSMUST00000113038,ENSMUST00000001258,ENSMUST00000113035,ENSMUST00000113039 2 4 4 81 17 56451626 56451646 ATGTTGAGATCTGTAGGAAGC 59 56451688 56452301 AGCTGAGAGTCATTCAAGAG 59 NA Mus musculus 50 Csn3 ENSMUSG00000001622 ENSMUST00000001667,ENSMUST00000113267,ENSMUST00000113271 3 3 3 91 5 88356619 88356639 CGTAGTTGTGAATATTCTGGC 59 88358752 88358770 TGTCATTCTTCTCACCACG 59 NA DesignNoJunction Mus musculus 50 Crkrs ENSMUSG00000003119 ENSMUST00000107539,ENSMUST00000003203,ENSMUST00000107538,ENSMUST00000092733 2 4 4 80 11 98098088 98102103 ACTTATCAGTCGTCTCTGTG 58 98102145 98102164 TTCATGGTGTTGAAGTAGGG 59 NA Mus musculus 50 Dusp3 ENSMUSG00000003518 ENSMUST00000107172,ENSMUST00000107173,ENSMUST00000003612 2 3 3 101 11 101842949 101842967 ACAGATTTCATTGACCAGG 57 101836189 101836207 GAGGTAGGCGATAACTAGC 59 NA DesignNoJunction Mus musculus 50 Psap ENSMUSG00000004207 ENSMUST00000004316 1 1 2 166 10 59758735 59760287 GATGTTGATGCACATGCAG 59 59761969 59762221 CCAGATTCTGCTCATAGGG 59 NA Mus musculus 50 Clcn3 ENSMUSG00000004319 ENSMUST00000110301,ENSMUST00000004430,ENSMUST00000110300 3 3 6 99 8 63454597 63454615 ATGAGGAGCTCCTAGATGG 59 63420199 63454536 GTATAATGAGTTCCAGCTGCT 59 NA Mus musculus 50 Ppp1cc ENSMUSG00000004455 ENSMUST00000102528,ENSMUST00000086294 3 2 2 80 5 122621926 122622750 TGTCATGGAGGTTTATCACC 59 122622791 122622811 TTGATCTGGTACATCAGTTGG 59 NA Nonspecific Mus musculus 50 Uqcc ENSMUSG00000005882 ENSMUST00000109631 1 1 6 150 2 155735149 155747376 TCCCAGAAGATCAAGATCG 58 155712940 155727038 GGACTAGACACATCCAGAC 58 NA Mus musculus 50 Eps15l1 ENSMUSG00000006276 ENSMUST00000098628 3 1 3 104 8 74904009 74904027 CACAGGATGACATCAACCA 59 74897833 74902988 TGAAAGGATCATCCTGGTC 58 NA Mus musculus 50 Sardh ENSMUSG00000009614 ENSMUST00000102886,ENSMUST00000091224 1 2 2 80 2 27083898 27085968 TATGACATCAGGCGTTTCC 59 27083836 27083854 CTTGGCATAGGACTCATGG 59 NA Mus musculus 50 Tcfcp2 ENSMUSG00000009733 ENSMUST00000108921,ENSMUST00000009877 2 2 3 81 15 100342178 100342196 TTTCTCCTCACCAGATCAG 58 100336678 100342133 TTCTGTACCATCTCATCGC 59 NA Mus musculus 50 Zfp179 ENSMUSG00000010086 ENSMUST00000058348 2 1 4 84 11 61264850 61264868 GAATACCTCCCAAGAGCTG 59 61264497 61264518 CATAATGTTTGCCATCACCTC 59 NA Mus musculus 50 Ebf3 ENSMUSG00000010476 ENSMUST00000033378 2 1 2 114 7 144390863 144390881 TCAGCACTAGCATGAATGG 59 144390255 144390785 TTCTGTTTCATGCCGTAGG 59 NA Mus musculus 50 Tnfrsf22 ENSMUSG00000010751 ENSMUST00000075588 3 1 2 86 7 150824335 150825819 TCATCTGTTTCAAATCCCAG 57 150824268 150824286 GATACGGAAGACAACAACG 58 NA Mus musculus 50 Gltp ENSMUSG00000011884 ENSMUST00000012028 1 1 1 75 5 115124085 115124103 TGAAGAAGTACCATGGCTG 59 115120564 115120582 AAGTCGGACTTGTAAGGTG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Dhdds ENSMUSG00000012117 ENSMUST00000012262,ENSMUST00000105887,ENSMUST00000105889,ENSMUST00000105885 1 4 5 91 4 133548486 133550085 GGAAGAACAGGAGAAGCTG 59 133548413 133548431 CAATCTTCTCCTGGAGGTC 59 NA Mus musculus 50 Fer1l4 ENSMUSG00000013338 ENSMUST00000109611 2 1 2 90 2 155875420 155875440 CTTGACCTAAAGTATCAACCC 58 155875202 155875368 TCAACTCTAAGCTGTCTCG 58 NA Mus musculus 50 Msh3 ENSMUSG00000014850 ENSMUST00000022220 2 1 3 81 13 93026697 93026715 TCACCTAGCAACTGTTGAC 59 93019878 93026652 TTCTTGTAGAGTTGGCCTG 59 NA Mus musculus 50 Gata5 ENSMUSG00000015627 ENSMUST00000015771,ENSMUST00000108890 1 2 2 63 2 180063012 180063030 CTACATGAAGCTCCATGGG 59 180062508 180062527 TCTTGTCTGGATACTCTCCT 59 NA DesignNoJunction Mus musculus 50 Kcnq2 ENSMUSG00000016346 ENSMUST00000016491,ENSMUST00000103047 3 2 10 83 2 180821722 180821740 ACGTCATCGAACAGTACTC 59 180820039 180821678 CCACAATCATATCTATCCTGGA 58 NA Mus musculus 50 Matn4 ENSMUSG00000016995 ENSMUST00000103104,ENSMUST00000103103,ENSMUST00000059332,ENSMUST00000109360 3 4 8 86 2 164223017 164225244 AAGAATTGTTTGGCCTTGG 58 164222949 164222967 ACAGAAATACGAGTCCACG 59 NA Mus musculus 50 Crlf3 ENSMUSG00000017561 ENSMUST00000103233 2 1 2 103 11 79870028 79870047 GAAGAAATATAGCCCTCCGG 59 79861230 79869962 AAGACTGCACCTGAATGTC 59 NA Mus musculus 50 Chd3 ENSMUSG00000018474 ENSMUST00000053025,ENSMUST00000092971 3 2 4 118 11 69166843 69167171 ATGAGGGTGAGAATAAGGAG 58 69166744 69166762 GTTCATGTTCTGCACATCC 59 NA Mus musculus 50 Unc45b ENSMUSG00000018845 ENSMUST00000108160 1 1 2 158 11 82742578 82742937 AAGAACCAGTGACAAGACC 59 82743059 82747347 AAGTCCTTCTTGTCCTTGG 59 NA Mus musculus 50 Slc36a1 ENSMUSG00000020261 ENSMUST00000108872,ENSMUST00000020499,ENSMUST00000108867 1 3 3 88 11 55038546 55039476 CATTGGAGTGGTTCTACCC 59 55039528 55039546 CAGTGATGATAGCCATCCC 59 NA Mus musculus 50 Acsl6 ENSMUSG00000020333 ENSMUST00000000145,ENSMUST00000108900 2 2 12 101 11 54148615 54151961 GAAAGTGACAGAGGGAGAC 59 54152026 54152044 TCATACATCCGATTCAGCA 58 NA Mus musculus 50 Rnf130 ENSMUSG00000020376 ENSMUST00000102776 2 1 2 130 11 49909457 49909475 GGGTGAAATCAACATTGCA 58 49912833 49918061 ACCATTCTACCTCATTAGCA 58 NA Mus musculus 50 Tnip1 ENSMUSG00000020400 ENSMUST00000102731,ENSMUST00000018482,ENSMUST00000102730,ENSMUST00000108889,ENSMUST00000101203 3 5 8 169 11 54753237 54754232 GCAAGGGATAAAGATGTTAGG 58 54751556 54753106 TTGTATCCTGTCCTGTGAG 58 NA Mus musculus 50 Myo19 ENSMUSG00000020527 ENSMUST00000093969,ENSMUST00000020837 3 2 2 103 11 84699228 84699246 CTGTACCTTGGTAGCTCTG 59 84699311 84701565 GTTTCAATTTCTGAGGCTGAG 59 NA Mus musculus 50 Elac2 ENSMUSG00000020549 ENSMUST00000108697 3 1 3 119 11 64805854 64805954 ATAGTAAGGAAGGGTCCAC 57 64807748 64807766 CATCAGTATTGCAGTCGAG 57 NA Mus musculus 50 Hnf1b ENSMUSG00000020679 ENSMUST00000108114 1 1 3 83 11 83669537 83669555 CCATGAAGACCCAGAAGAG 59 83669602 83675310 TCTGTTGACTGAACTGTCG 59 NA Mus musculus 50 Ankrd40 ENSMUSG00000020864 ENSMUST00000107818,ENSMUST00000051221,ENSMUST00000021227 1 3 3 100 11 94196214 94199664 TATGCAAGAGCTGGTACTC 58 94199728 94199746 CTTGGTAGGTGAGTTCCTG 59 NA Mus musculus 50 Cacna1g ENSMUSG00000020866 ENSMUST00000107793,ENSMUST00000107792,ENSMUST00000107791,ENSMUST00000107790,ENSMUST00000107789,ENSMUST00000107788,ENSMUST00000103166,ENSMUST00000100561,ENSMUST00000050636,ENSMUST00000080043,ENSMUST00000021234,ENSMUST00000107785,ENSMUST00000073986 3 13 14 80 11 94321187 94323220 TTCTTCTCATCATCGTGGG 59 94321125 94321143 GCTTGGTCTCAGAGAACTG 59 NA Mus musculus 50 Cacna1g ENSMUSG00000020866 ENSMUST00000107790,ENSMUST00000107789,ENSMUST00000103166,ENSMUST00000107786,ENSMUST00000050636,ENSMUST00000021234 1 6 14 85 11 94285025 94287106 GAGAAGGAATCTAATGTTGGAC 58 94280261 94280279 AGTAGTAGGGTTTGCACTG 58 NA Mus musculus 50 Snx11 ENSMUSG00000020876 ENSMUST00000021246,ENSMUST00000107661 1 2 3 190 11 96632114 96632132 TCAGTTGCATCTCTTCCTC 58 96630626 96631960 GAAAGCAGCAACTGTTGAG 59 NA Mus musculus 50 Fbxl20 ENSMUSG00000020883 ENSMUST00000107549 3 1 4 81 11 97963102 97972258 ATGCATTAAGTACCTGCAC 57 97963039 97963058 GTTATTGACGTACAGGAAGC 58 NA Mus musculus 50 Dvl2 ENSMUSG00000020888 ENSMUST00000102575,ENSMUST00000019362 2 2 2 80 11 69821898 69821919 CAAGATTACTTTCTCTGAGCAG 58 69821956 69822294 GAGAGGTTAACTAGGTAACTCTC 59 NA Mus musculus 50 Scfd1 ENSMUSG00000020952 ENSMUST00000110735 2 1 4 145 12 52534271 52534289 AGAACCTGGTATTGAAGCA 58 52543568 52545820 TTTGTAGAGGAAGGAGCTG 58 NA Mus musculus 50 Zc3h14 ENSMUSG00000021012 ENSMUST00000057000 3 1 6 148 12 100002180 100021801 AAAGTCAAGCCGAGATGAC 59 100023126 100023144 TTTACAGTTGGGAAAGGCT 59 NA Mus musculus 50 Ttc8 ENSMUSG00000021013 ENSMUST00000079146,ENSMUST00000085109 1 2 2 81 12 100184811 100195497 CGATGTTAAGATGGCTTTGG 59 100195541 100195559 AATCTGTACCTTCCACCAC 58 NA Mus musculus 50 1810035L17Rik ENSMUSG00000021040 ENSMUST00000077462 1 1 1 76 12 88790296 88790315 GGAAGAACTTCAGAATGCAC 59 88790757 88790775 CTCTTTGAGCTTGAACGTG 59 NA DesignNoJunction Mus musculus 50 Sgpp1 ENSMUSG00000021054 ENSMUST00000021450,ENSMUST00000110428 2 2 2 84 12 76817640 76823646 CTATCCTGGATGTCATTGCT 59 76817575 76817593 AAGTTGTCAATCAGGTCCA 58 NA Mus musculus 50 1600002O04Rik ENSMUSG00000021260 ENSMUST00000021685,ENSMUST00000101052 3 2 2 121 12 109550441 109550460 TATGTCTACTATTCGGTGGG 58 109550542 109554678 TCGATCTCCAGAATTATCCTC 58 NA Mus musculus 50 Spata9 ENSMUSG00000021590 ENSMUST00000022081 2 1 2 66 13 76130527 76130546 GTATGCTTCTTATGCAGCAC 59 76135950 76135968 CTTTATCTTTGCCAGCACC 59 NA DesignNoJunction Mus musculus 50 2310021P13Rik ENSMUSG00000021819 ENSMUST00000112490 1 1 2 87 14 21537181 21540767 CACCTACAATGCTCTCCAG 59 21540818 21540836 CATATGAGGCATAGGGTGG 59 NA Mus musculus 50 Camk2g ENSMUSG00000021820 ENSMUST00000071816,ENSMUST00000080440,ENSMUST00000100837 2 3 4 96 14 21584150 21584168 TGTATATCCTCCTGGTGGG 59 21583480 21584090 GGTGATGGGAAATCGTAGG 59 NA Mus musculus 50 Slmap ENSMUSG00000021870 ENSMUST00000112330 3 1 7 161 14 27279660 27279679 AGAGGAAATCCAACAGAAGG 59 27262111 27279536 ATCAGCTTCTCTTGCAGAG 59 NA Mus musculus 50 Slmap ENSMUSG00000021870 ENSMUST00000102956,ENSMUST00000112331,ENSMUST00000038522,ENSMUST00000100798 1 4 7 91 14 27279541 27279559 CTTCACCAATGAAAGGCTG 59 27278938 27279399 CTTGTATCCCTAAGCTGCT 58 NA Mus musculus 50 4933413J09Rik ENSMUSG00000021874 ENSMUST00000022427 2 1 2 82 14 27195771 27195789 ATCACAGTCCTGTAACACC 58 27195835 27197207 CTGTCAACCTGTGTAGACC 59 NA Mus musculus 50 Hmbox1 ENSMUSG00000021972 ENSMUST00000056878 1 1 3 175 14 65444519 65445616 CAATATCGCAGCAATCCTG 59 65444132 65444151 CTACCTTCTCTGCTTCTCTG 59 NA Mus musculus 50 Oxr1 ENSMUSG00000022307 ENSMUST00000110297,ENSMUST00000022918,ENSMUST00000090095 2 3 4 88 15 41680289 41682016 GGCTCCAGATTACTACAAGG 59 41682066 41682085 GTTTGGTCGGAAAGATTCAG 59 NA Mus musculus 50 Efcab6 ENSMUSG00000022441 ENSMUST00000109466,ENSMUST00000016589 3 2 4 81 15 83780507 83782649 TAATTATCAGTTCGACGCCC 59 83780445 83780463 TTTAACTTCGCAACCATGC 59 NA Mus musculus 50 Sidt1 ENSMUSG00000022696 ENSMUST00000047446,ENSMUST00000114652 2 2 3 80 16 44270011 44270030 TCTGGAAATATGGCTGTCTC 59 44268014 44269968 ACTGGACTCATCTATTGCC 58 NA Mus musculus 50 Ypel1 ENSMUSG00000022773 ENSMUST00000035682,ENSMUST00000023458 3 2 3 87 16 17082260 17084617 GTGGAAATACGAACATGCC 59 17084667 17084686 GTTGTCTTTGATCATGTGGG 59 NA Mus musculus 50 Esx1 ENSMUSG00000023443 ENSMUST00000074698,ENSMUST00000113066 2 2 2 82 X 133651839 133652920 GGACCTGTTTGCTAGAGTG 59 133650523 133650541 CCCTTCTGTTCTGAAACCA 59 NA Mus musculus 50 Fgd2 ENSMUSG00000024013 ENSMUST00000024810 3 1 1 80 17 29504294 29504312 CTGCTCAAGGAATATGTGC 58 29504867 29504885 GAAGATCATGTCCAGTGCT 59 NA DesignNoJunction Mus musculus 50 Zfp91 ENSMUSG00000024695 ENSMUST00000088953 1 1 2 84 19 12844724 12844742 AAACTCAACAGCTGGAGAG 59 12839888 12844677 CTAAATCAACCGTTCTGTCC 58 NA Nonspecific Mus musculus 50 Uhrf2 ENSMUSG00000024817 ENSMUST00000025739,ENSMUST00000112552 1 2 2 86 19 30113759 30113777 TTATTGACCCTGGCTTTGG 59 30130764 30130782 TATGTGCTTCAAACCAAGC 58 NA DesignNoJunction Mus musculus 50 Tmem134 ENSMUSG00000024845 ENSMUST00000071372,ENSMUST00000064575 1 2 2 92 19 4131270 4131367 TTAGTCCCAGGAGTCTACC 59 4131423 4131441 CTTCTCAAAGTAGGGCAGG 59 NA Mus musculus 50 Bad ENSMUSG00000024959 ENSMUST00000025910,ENSMUST00000113423 1 2 2 151 19 7025310 7025896 GTTCCTTCAAGGGACTTCC 59 7026011 7026029 ATGTGGAGCAGAAGATCAC 59 NA InUTR Mus musculus 50 Ldb1 ENSMUSG00000025223 ENSMUST00000026252,ENSMUST00000056931 2 2 2 80 19 46110459 46110478 CATATGGTAACCAAACCGAC 58 46110312 46110416 AGAGATTGTCACACTCCTC 58 NA Mus musculus 50 Arhgef9 ENSMUSG00000025656 ENSMUST00000113876,ENSMUST00000113885,ENSMUST00000113883,ENSMUST00000113882,ENSMUST00000113878,ENSMUST00000113881,ENSMUST00000113880,ENSMUST00000113873 2 8 10 63 X 92250315 92250333 AATCAGAAGAGACAGGCTG 58 92247482 92250288 CAGAGTTGACACCTTTCTG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Rhot2 ENSMUSG00000025733 ENSMUST00000043897 1 1 3 87 17 25976970 25976989 TGCTTAATGTTTGACAGCAG 59 25976830 25976920 AATAACGTGGGCTCAAGTC 59 NA Mus musculus 50 Cflar ENSMUSG00000026031 ENSMUST00000114313,ENSMUST00000069333 1 2 3 90 1 58789157 58792507 AGTATAACTCAAGGCTCCAG 58 58797110 58797128 ATGGATGTCTTCACCAGTG 59 NA Mus musculus 50 Dst ENSMUSG00000026131 ENSMUST00000088216 1 1 8 129 1 34306363 34306381 GTTTCATGAGACCCTGGAG 59 34306473 34306657 TTCTAAGACCTTGTGCTGTG 59 NA Mus musculus 50 Pnkd ENSMUSG00000026179 ENSMUST00000027370 1 1 4 80 1 74332519 74332539 CCCTGAGCTAGAATACATTCC 59 74332581 74393973 GTGTACAGGCTATACCAGG 58 NA Mus musculus 50 Sp100 ENSMUSG00000026222 ENSMUST00000066427,ENSMUST00000054279 2 2 4 95 1 87571810 87571828 AGAAGCTACAACCACAGTC 59 87575678 87577673 GTGTCAGAAGTATCTCCTCC 58 NA Mus musculus 50 Fcgr2b ENSMUSG00000026656 ENSMUST00000081103 3 1 3 107 1 172895911 172895931 CAGTATTGACAATTGTGGCTG 59 172891356 172895842 GAGGATTGTCTGGAACCTG 59 NA Mus musculus 50 Nsun6 ENSMUSG00000026707 ENSMUST00000074887,ENSMUST00000114713 2 2 5 134 2 14968801 14968819 TCAGTTCAGCATGTCAGAG 59 14959845 14963863 GCTTTCATAACTTGGTCCAG 58 NA Mus musculus 50 Stam ENSMUSG00000026718 ENSMUST00000102960,ENSMUST00000028050 1 2 3 173 2 13995960 14024044 GTTGAGAAAGCAACTAGTGAG 58 14037510 14037613 TCCCAGAAGAGTTAAGGCT 59 NA Mus musculus 50 St6galnac6 ENSMUSG00000026811 ENSMUST00000113290,ENSMUST00000113282,ENSMUST00000095044,ENSMUST00000072111,ENSMUST00000081879 3 5 6 86 2 32464823 32467748 TGAGTAGCAACAAAGAGCA 59 32467798 32467816 CACTGTTGGAGCTGTAGAG 59 NA Nonspecific Mus musculus 50 Lamc3 ENSMUSG00000026840 ENSMUST00000028187 3 1 2 180 2 31781093 31781111 CTGGAGGATTCTGTGAAGG 59 31781254 31781510 GAAGACTTGCCAGAAATGAG 58 NA Mus musculus 50 Nup35 ENSMUSG00000026999 ENSMUST00000028382 2 1 2 61 2 80495012 80496116 AGCATGTGATGTCTAACAC 57 80496141 80496159 GGCTTGCAATTTAGATTGG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Tfpi ENSMUSG00000027082 ENSMUST00000111718,ENSMUST00000028487,ENSMUST00000090732,ENSMUST00000111714,ENSMUST00000111717,ENSMUST00000111712 2 6 8 87 2 84284291 84284910 CTGTGAGAATCCAGTCCAC 59 84284222 84284242 GCGATCAGTTACAGTATTTCC 58 NA Mus musculus 50 Itga6 ENSMUSG00000027111 ENSMUST00000112101,ENSMUST00000036783 2 2 3 95 2 71687478 71687496 ATTCAGGAGTAGCTTGGTG 58 71687555 71693920 AGAATCCACACTTCCACAG 59 NA Mus musculus 50 4930525F21Rik ENSMUSG00000027209 ENSMUST00000110446,ENSMUST00000110448 2 2 4 136 2 125809492 125812001 ACATAAACAACGTGTTGAGG 58 125809375 125809395 CCACATTGTTGAAGTCTTCTG 59 NA Mus musculus 50 Tyro3 ENSMUSG00000027298 ENSMUST00000028762 2 1 5 89 2 119628017 119628037 TAAAGTCAGTGGAACGTCTG 59 119628089 119628107 GTGAGCCATACTGACTGAG 59 NA Mus musculus 50 Stard7 ENSMUSG00000027367 ENSMUST00000069099,ENSMUST00000110375,ENSMUST00000028845 2 3 4 81 2 127117975 127121226 TCGTTTGATGAGAATGGCT 59 127121271 127121289 AACTGACACAGTATCGAGG 58 NA Mus musculus 50 2310046K01Rik ENSMUSG00000027463 ENSMUST00000073228,ENSMUST00000109861 3 2 4 160 2 151830266 151830287 ATCTTACCACCTTCTTCATAGG 59 151830408 151831279 GCTAAGGTTTCCCTGAGTG 59 NA Mus musculus 50 Dnajb4 ENSMUSG00000028035 ENSMUST00000050073,ENSMUST00000029669 1 2 2 141 3 151849469 151849488 CAAATAGTATCCCAGCAGAC 57 151848313 151848331 GTTGGCACATTAAGTGAGC 59 NA DesignNoJunction Mus musculus 50 Adam15 ENSMUSG00000028041 ENSMUST00000029676,ENSMUST00000107448,ENSMUST00000074582,ENSMUST00000107447,ENSMUST00000107446 1 5 5 80 3 89151857 89152447 TGCTTCAGACTGGTTTACC 59 89151795 89151813 TTTGTAGAAGCTCCAGGAC 58 NA Mus musculus 50 Ccne2 ENSMUSG00000028212 ENSMUST00000108324,ENSMUST00000029866 2 2 2 81 4 11122240 11122258 CAAGTTCTGCATTCTGACC 58 11122300 11124318 GAGTGTATACTTCACAAACCTC 58 NA Mus musculus 50 Snx30 ENSMUSG00000028385 ENSMUST00000030080 2 1 2 119 4 59892142 59892160 GAAGAGTTTGTGGAGACCA 59 59892243 59897860 ATTCAGGTCCTTAGCAGTG 58 NA Mus musculus 50 Aptx ENSMUSG00000028411 ENSMUST00000108103 3 1 4 169 4 40640474 40642419 AGTACAGCAGGAATCACTG 58 40638129 40638147 CCTTCAGACTGGAAATGGA 58 NA Mus musculus 50 Pde4b ENSMUSG00000028525 ENSMUST00000106911,ENSMUST00000030251,ENSMUST00000106907,ENSMUST00000106908,ENSMUST00000106905,ENSMUST00000106904 1 6 9 60 4 102159979 102159997 ATGTCCAGGAACTCATCAC 58 102170237 102170255 AAGGAGTGACAATCAGGTC 58 NA DesignNoJunction Mus musculus 50 Echdc2 ENSMUSG00000028601 ENSMUST00000052999,ENSMUST00000116309,ENSMUST00000106695,ENSMUST00000106694,ENSMUST00000106693,ENSMUST00000116308,ENSMUST00000106692,ENSMUST00000030338,ENSMUST00000116307 1 9 10 142 4 107842375 107842471 GTTTGTTAGTGAGCTGCTG 59 107844717 107844735 CCTCCACATCACTCATCTG 59 NA Mus musculus 50 Yrdc ENSMUSG00000028889 ENSMUST00000030720,ENSMUST00000102628 2 2 2 115 4 124529252 124531124 CTGAGTGTTGAGGAGTTCC 59 124531203 124531221 AAGTCAACCACAGTAGAGC 59 NA Mus musculus 50 Pftk1 ENSMUSG00000028926 ENSMUST00000115451,ENSMUST00000115452,ENSMUST00000030763,ENSMUST00000115450 3 4 5 82 5 5135367 5135385 CAACATCGTGTTGCTTCAC 59 5103839 5135322 GACATAAATCAGTGTGCACG 59 NA Mus musculus 50 Espn ENSMUSG00000028943 ENSMUST00000030785,ENSMUST00000084114,ENSMUST00000080042,ENSMUST00000105656,ENSMUST00000105655 2 5 13 85 4 151503737 151504885 TACTGGCAAAGTGAGAGTC 58 151502612 151502631 GAAGCTCTGAGTTATCACCC 59 NA Mus musculus 50 Tmub1 ENSMUSG00000028958 ENSMUST00000030799,ENSMUST00000115033,ENSMUST00000115036 2 3 3 114 5 23952396 23952414 TCTCAATGACTCTGAGCAG 58 23952040 23952058 TTGACCTTGGTAGATGAGC 58 NA DesignNoJunction Mus musculus 50 Tnfrsf9 ENSMUSG00000028965 ENSMUST00000030808,ENSMUST00000105671,ENSMUST00000116257 1 3 5 80 4 150309600 150309620 TCATTACTCTCCTGTTCTCTG 58 150309661 150318896 TGGTCTTCTTAAATGGTTGC 58 NA Mus musculus 50 Rsrc2 ENSMUSG00000029422 ENSMUST00000050827,ENSMUST00000057795,ENSMUST00000111515 3 3 3 92 5 124189563 124189581 AAGGATCAGAACTCGTTCC 58 124186679 124189510 TTCTTTCTATCTCGACTTCGAC 59 NA Mus musculus 50 B930006L02Rik ENSMUSG00000029461 ENSMUST00000084914 1 1 3 85 7 107961502 107967257 AGTTATGCTCCAGAGTTTCAG 59 107972673 107972691 CAGGAAGACGAGTTCTGTG 59 NA Mus musculus 50 Psmg3 ENSMUSG00000029551 ENSMUST00000031531 3 1 1 119 5 140302160 140302178 GAAGATGGGTACGCTAGTG 59 140300005 140300024 TTTGCAAAGACATGGATGAG 58 NA DesignNoJunction Mus musculus 50 Gnb2 ENSMUSG00000029713 ENSMUST00000031726,ENSMUST00000111027 2 2 2 117 5 137970990 137971088 TACACCACTAACAAGGTCC 58 137970891 137970909 AGATGGAGCAGATGTTGTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ptn ENSMUSG00000029838 ENSMUST00000101534 1 1 2 123 6 36691370 36691388 CCTTGAAGACCAGAACTGG 59 36665750 36691283 TTCTTTGACTCCGCTTGAG 59 NA Mus musculus 50 Dusp16 ENSMUSG00000030203 ENSMUST00000065273 3 1 3 103 6 134708706 134708724 GATGTTGGTTCTCTGTCGT 59 134675997 134708639 TTCTGTTGCATCAGGTCTG 59 NA Mus musculus 50 Kras ENSMUSG00000030265 ENSMUST00000032399,ENSMUST00000111710,ENSMUST00000111709,ENSMUST00000032397 3 4 4 110 6 145195296 145195314 TAAACTTGTGGTGGTTGGA 58 145182936 145195223 CTGTAGGAGTCCTCTATCGT 59 NA InUTR Mus musculus 50 3200002M19Rik ENSMUSG00000030649 ENSMUST00000106978,ENSMUST00000106975,ENSMUST00000032884 1 3 5 73 7 109046322 109046464 TCAAACTCAGCTTAGGAGC 59 109046501 109046519 AAACCACAGTGTCTCAGTC 59 NA DesignRelaxed Mus musculus 50 Sult1a1 ENSMUSG00000030711 ENSMUST00000106373,ENSMUST00000106371,ENSMUST00000106372,ENSMUST00000075935 3 4 4 82 7 133817686 133817793 ATGGGAAAGTGTCCTATGG 58 133817622 133817641 GAGATAGAGAACAGGGTGAG 58 NA Mus musculus 50 Myh14 ENSMUSG00000030739 ENSMUST00000048102,ENSMUST00000107900,ENSMUST00000107899 3 3 3 80 7 51909416 51910601 ATCGAGACCTATCTGTTGG 58 51909354 51909373 CAGCTGGTAGAAGATATGGA 58 NA Mus musculus 50 Tial1 ENSMUSG00000030846 ENSMUST00000106226 3 1 2 90 7 135592279 135598463 AAATGATAACAGAGCAACCC 58 135592208 135592226 AAGCAATATGGGTCATTGC 58 NA Mus musculus 50 A930008G19Rik ENSMUSG00000030956 ENSMUST00000097999,ENSMUST00000065371,ENSMUST00000106169,ENSMUST00000106168,ENSMUST00000106165,ENSMUST00000106166 2 6 8 93 7 139963283 139963301 GATGAGTCAAGGACCTACC 58 139951798 139951816 CTGGTCAATCTGAAGAGGG 59 NA DesignNoJunction Mus musculus 50 Syt8 ENSMUSG00000031098 ENSMUST00000105977,ENSMUST00000105978,ENSMUST00000105976,ENSMUST00000097939 1 4 4 90 7 149624439 149624806 CTACTCACCTGGTTCAACC 59 149624860 149624878 TACTCTAGTGACAGCAGGA 58 NA Mus musculus 50 Cenpi ENSMUSG00000031262 ENSMUST00000081064,ENSMUST00000101251 1 2 2 80 X 130844842 130844860 GAAGATTCTACACGCACTG 58 130844903 130846540 TTTCTTAGGACCTTTCTGGA 57 NA Mus musculus 50 Phka2 ENSMUSG00000031295 ENSMUST00000112377,ENSMUST00000033652 2 2 4 94 X 157028219 157028238 TACCGAAATGGACAGTATCG 59 157028295 157028883 TTCCAAATGACACCTGGTC 59 NA Mus musculus 50 Ank1 ENSMUSG00000031543 ENSMUST00000110688,ENSMUST00000084037,ENSMUST00000110685 1 3 6 175 8 24220190 24221838 CTGAAGATGAAGGTGACGA 59 24222330 24222348 TTCAGATCGGATCACAACG 59 NA Mus musculus 50 Ank1 ENSMUSG00000031543 ENSMUST00000084038,ENSMUST00000072833 2 2 6 91 8 24220827 24221837 CACATATCTATAATGGGTGACG 58 24221888 24221907 AAATCCAACAGCTCTTTCTC 58 NA Mus musculus 50 Sh3rf1 ENSMUSG00000031642 ENSMUST00000093488,ENSMUST00000110291,ENSMUST00000034060 2 3 3 134 8 63808265 63808283 GACAAAGATTGCCTTCCCT 59 63808809 63828208 AGCTGAGTTAAACTCCACG 59 NA Mus musculus 50 Zcwpw2 ENSMUSG00000032443 ENSMUST00000035017 1 1 2 192 9 117873694 117907925 TAGTCTCACGTTAGAGGCA 59 117857008 117869088 TTTGGAAACTTGCATCCCT 59 NA Mus musculus 50 Lrrfip2 ENSMUSG00000032497 ENSMUST00000035078 1 1 3 123 9 111043814 111043832 CTTTGAGTAACATCGCCAG 58 111063889 111069717 GTATCCTCAACTCCCTCTC 58 NA Mus musculus 50 Triobp ENSMUSG00000033088 ENSMUST00000109690,ENSMUST00000109689,ENSMUST00000089366,ENSMUST00000109687,ENSMUST00000109688,ENSMUST00000041035 1 6 6 68 15 78834212 78834882 TGATACAGAAGGACAAGCG 59 78834914 78834932 TCTTGATGTGGTTCAGCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Myh2 ENSMUSG00000033196 ENSMUST00000018640 3 1 2 105 11 67004960 67005110 GAAGTAAAGGCCAAGAACG 58 67005179 67005197 GTTCAGCCTTAGACTCCTG 59 NA Mus musculus 50 Ctdp1 ENSMUSG00000033323 ENSMUST00000036229,ENSMUST00000114707 2 2 2 86 18 80617365 80630918 GTATGGACAAAGAGGTCGA 58 80617297 80617315 CATTGTCTTGGTCTTCTGG 58 NA Mus musculus 50 Dysf ENSMUSG00000033788 ENSMUST00000113823,ENSMUST00000113818,ENSMUST00000081904 3 3 5 103 6 84037861 84047713 AATAGAAGTGGACGACAACC 59 84047779 84047797 CATAAGGATCTGGGAAGCC 59 NA Mus musculus 50 BC016423 ENSMUSG00000033799 ENSMUST00000096069 2 1 2 84 13 3576435 3581005 ATACTGAGGTAACTGGAGGT 59 3576370 3576388 CTTACAACACCAGACAGCA 59 NA Mus musculus 50 Wdr78 ENSMUSG00000035126 ENSMUST00000036451,ENSMUST00000116316 2 2 5 82 4 102732533 102732552 ATCTTGGTGTCCATATCAGC 59 102722790 102732488 AGATGTTCGTGTCCATGAC 59 NA Mus musculus 50 Snapc4 ENSMUSG00000036281 ENSMUST00000114115,ENSMUST00000035427,ENSMUST00000114111 3 3 3 81 2 26225481 26225499 GAATCGCTTCTGAATTGCC 59 26225119 26225436 AGATGCTGTTTCTTCCTGG 59 NA Mus musculus 50 Gng12 ENSMUSG00000036402 ENSMUST00000043148,ENSMUST00000114228,ENSMUST00000114227,ENSMUST00000114226,ENSMUST00000114225,ENSMUST00000114224,ENSMUST00000114222 2 7 7 124 6 66965821 66967462 CCATCGAAAGAATAAAGGTCTC 58 66967546 66967565 CTTCTTATCCTTGAACGGGT 59 NA Mus musculus 50 Etl4 ENSMUSG00000036617 ENSMUST00000114610,ENSMUST00000114627,ENSMUST00000114624,ENSMUST00000114620,ENSMUST00000114619,ENSMUST00000045555,ENSMUST00000114614,ENSMUST00000114609,ENSMUST00000066509 2 9 12 93 2 20635065 20665093 GAGACATGAGGATGCAGAG 59 20665150 20665168 ATTACATGAGGTGGGTGAG 58 NA Mus musculus 50 Tacc3 ENSMUSG00000037313 ENSMUST00000114422 3 1 4 147 5 34006952 34006970 ACAAGTCTTCTGGACAGTG 59 34007081 34007387 GTTCTAGTCCCTGATGGGA 59 NA Mus musculus 50 Larp2 ENSMUSG00000037814 ENSMUST00000048490 1 1 2 188 3 40767893 40767913 CAGAGTGTTATCAACCAAGGA 59 40768060 40771303 CCATTTGTGCTTATTAGCTCTC 59 NA Mus musculus 50 Rbbp7 ENSMUSG00000038344 ENSMUST00000041370,ENSMUST00000112316,ENSMUST00000112314,ENSMUST00000112315 1 4 4 204 X 159235738 159245431 AAATATGCTGATCTCCTGGA 58 159228720 159228738 CCTGCTGCATATTCTCCTC 59 NA DesignRelaxed Mus musculus 50 Garnl4 ENSMUSG00000038807 ENSMUST00000094030 3 1 4 147 11 74298467 74380729 TCTGAAGGTCAAGAAGCAG 59 74250951 74255255 CGGGATATAGTCATCCTGC 59 NA Mus musculus 50 Hace1 ENSMUSG00000038822 ENSMUST00000059925 1 1 2 110 10 45397067 45420398 AAAGAGCTACTGCTTTCTG 57 45420471 45420768 CCAGAACCACTGAATAACTG 58 NA Mus musculus 50 Garnl3 ENSMUSG00000038860 ENSMUST00000113174,ENSMUST00000043162 3 2 4 107 2 32960379 32960397 CTGAACTAGAGTCCCAGGT 59 32919586 32941400 CACTAGAGATGAGCAGCTC 59 NA Mus musculus 50 Sec24c ENSMUSG00000039367 ENSMUST00000048657 2 1 2 114 14 21503140 21503158 ATTATGAGAGCCCATACCC 58 21503236 21505741 ATAACCTGAATAGGGCTGG 58 NA Mus musculus 50 C330001K17Rik ENSMUSG00000039632 ENSMUST00000115336,ENSMUST00000044926 1 2 2 80 9 21799379 21799485 AAGTCTTACCTCCAGGAGG 59 21799317 21799336 ATGTTTGGTGTTCATCACCT 59 NA Mus musculus 50 Ncoa7 ENSMUSG00000039697 ENSMUST00000105514,ENSMUST00000068567,ENSMUST00000092610,ENSMUST00000099982 3 4 4 106 10 30368338 30372754 CATGGATAACCAGATATTTGGG 58 30368253 30368272 TGAAATTCGGACTAAAGGTG 57 NA Mus musculus 50 Ncoa7 ENSMUSG00000039697 ENSMUST00000105514,ENSMUST00000068567,ENSMUST00000092610,ENSMUST00000099982 1 4 4 89 10 30368338 30372754 CATGGATAACCAGATATTTGGG 58 30368270 30368288 GTGTAGAGAAACGTTTCGC 59 NA Mus musculus 50 Zfp800 ENSMUSG00000039841 ENSMUST00000115320,ENSMUST00000115321,ENSMUST00000035930 3 3 3 80 6 28206515 28210725 CGAACCAGTTTATATCCTGG 57 28206454 28206472 TGCTGAATACCAGATTTGG 57 NA Mus musculus 50 Rapgef1 ENSMUSG00000039844 ENSMUST00000048301 3 1 4 121 2 29581778 29581796 ATGCTACTGAGACAGACAG 58 29586125 29588359 GAACTTCTCATATCGGTACTG 57 NA Mus musculus 50 Gpr37 ENSMUSG00000039904 ENSMUST00000115332,ENSMUST00000054867 3 2 2 60 6 25638361 25638379 CCATTGACCCAAGAATCCT 59 25638319 25638339 CAAAGATCACCACAGATAAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Magi2 ENSMUSG00000040003 ENSMUST00000088516,ENSMUST00000115267 3 2 3 81 5 20040322 20040343 GAGAGCCATTTATGAAAGTAGG 58 20049440 20056041 TTCCTTATAATCTGGACCAGAG 58 NA Mus musculus 50 Trim7 ENSMUSG00000040350 ENSMUST00000093155 1 1 4 106 11 48652126 48652355 AAGAGTTGCTGGATTCCAG 59 48652424 48658946 CATCTGCTTTAGAAGCTCCT 59 NA Mus musculus 50 Akap9 ENSMUSG00000040407 ENSMUST00000088917 1 1 2 132 5 3951725 3954405 TAGCTCGGAGATTAATGGC 58 3954842 3954860 CTGAAGACAGGTCTGACTG 59 NA Mus musculus 50 Adam22 ENSMUSG00000040537 ENSMUST00000088747 3 1 13 80 5 8086620 8087997 AAGGACCATACTTTAGCTCC 58 8082235 8082255 TTGATGAAGAAGGAGACTTGG 59 NA Mus musculus 50 9030409G11Rik ENSMUSG00000040606 ENSMUST00000070792,ENSMUST00000036476 2 2 2 150 4 141703004 141703022 ATCTCTGATGCTTCTGCTG 59 141697702 141699220 CCTCTAGTGACTGTACAATAGG 59 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000099723,ENSMUST00000111369,ENSMUST00000111373 2 3 17 87 2 90998620 90998638 ATCAAGACTCTGTCATCGG 58 90998287 90998570 GAACTATTACTCACGGTGCT 59 NA Mus musculus 50 D4Ertd22e ENSMUSG00000040842 ENSMUST00000039939,ENSMUST00000102487,ENSMUST00000094549 3 3 3 96 4 140695641 140695659 AGATGGAAGATGAGGAGGT 59 140674653 140674671 CTTGAATCACAATGGGCAC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 S100pbp ENSMUSG00000040928 ENSMUST00000106059 3 1 4 107 4 128859655 128859673 GGATGACTCCTTGTTGGAG 59 128859335 128859585 GGATCACAAACATCATCGTC 58 NA Mus musculus 50 Stx3 ENSMUSG00000041488 ENSMUST00000069285,ENSMUST00000112965,ENSMUST00000112964 1 3 5 97 19 11857586 11857604 AGTTGAATGTCATGCACAC 58 11856162 11857526 TATCAATTTCTTCCGAGCCT 58 NA Mus musculus 50 Coro2b ENSMUSG00000041729 ENSMUST00000048043,ENSMUST00000113985 2 2 2 93 9 62279263 62280171 ACTACAAGGTCCTCATCTG 57 62279188 62279207 GTATTGAAGGACATGCAGAG 58 NA Mus musculus 50 Sytl3 ENSMUSG00000041831 ENSMUST00000097430,ENSMUST00000075075,ENSMUST00000115762,ENSMUST00000115761,ENSMUST00000115760,ENSMUST00000080509 1 6 7 80 17 6919847 6919866 GAGATATGCATCAAGACCTG 57 6919909 6932603 GTAGGTCTTGACATACGGA 58 NA Mus musculus 50 Inpp5f ENSMUSG00000042105 ENSMUST00000043138,ENSMUST00000098007 1 2 3 82 7 135779745 135802542 TCATTCAGATCTTCCATGGTG 59 135802586 135802604 TACAGACCTCATGGTCTCC 59 NA Mus musculus 50 B230209C24Rik ENSMUSG00000042182 ENSMUST00000115161,ENSMUST00000062289 3 2 2 81 1 33921417 33921435 CCAACTCTACTTCCAGCTC 59 33920766 33921372 CTCTCAATCGTGAACTGCT 59 NA Mus musculus 50 Sgsm1 ENSMUSG00000042216 ENSMUST00000100876 2 1 3 91 5 113687874 113687892 TATATCTGGCAGCACATCG 59 113687397 113687819 GAAACCTGGTCATCATCCA 59 NA Mus musculus 50 Adora1 ENSMUSG00000042429 ENSMUST00000086465 3 1 2 251 1 136130713 136130731 CTTATCAACATTGGGCCAC 58 136100056 136100074 CTCACTCAGGTTGTTCCAG 59 NA DesignNoJunction Mus musculus 50 Sipa1l1 ENSMUSG00000042700 ENSMUST00000053969,ENSMUST00000110321,ENSMUST00000047967 2 3 3 92 12 83547905 83550301 AAGTCCTACAGCAGTAAGG 58 83550356 83550375 CTTCAAATCTTCTCGAAGCA 58 NA Mus musculus 50 Gprasp1 ENSMUSG00000043384 ENSMUST00000113147,ENSMUST00000113145 3 2 5 106 X 132286538 132332092 TGTTCAACCATTTGAACAGC 59 132332161 132332337 TTAAAGCAGGGCAATCTCC 59 NA InUTR Mus musculus 50 Fndc7 ENSMUSG00000045326 ENSMUST00000102620 3 1 2 101 3 108675280 108679363 CTGAAGACTGTTGCTTGTG 58 108675197 108675215 ATAATAGTCACCCAGCTCC 58 NA Mus musculus 50 Sdpr ENSMUSG00000045954 ENSMUST00000051572 2 1 1 60 1 51357673 51357691 AAGATGGAAGAAAGCAGGG 59 51357715 51357733 GGCTATCGACTTTCTTGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ankrd16 ENSMUSG00000047909 ENSMUST00000056108 3 1 1 92 2 11707916 11711365 AAGAAATCGCTCAGTCCTG 59 11711421 11711439 TCTTCGGAATCCTTCAGTC 58 NA Mus musculus 50 Ldlrad3 ENSMUSG00000048058 ENSMUST00000058790,ENSMUST00000111222,ENSMUST00000057414 3 3 3 61 2 101795323 101898073 AGTTCTCTAGAACCAGGCA 59 101795280 101795299 TAGTACACAAGCTGGTTCTC 59 NA DesignRelaxed Mus musculus 50 Syngr2 ENSMUSG00000048277 ENSMUST00000026649 3 1 1 76 11 117673967 117673985 CACTGACCGAAAGTACCTG 59 117674374 117674392 AGAAACCAACAAACCACAG 58 NA DesignNoJunction Mus musculus 50 Tmprss11f ENSMUSG00000048764 ENSMUST00000058080,ENSMUST00000116553 3 2 2 81 5 86957319 86958925 GTAGATGATGGGCCTACAC 59 86957256 86957274 CATCCTTTCTGTTGCACAC 59 NA Mus musculus 50 Vstm2a ENSMUSG00000048834 ENSMUST00000093308,ENSMUST00000109647 2 2 4 83 11 16268311 16268329 ATCCGAAGTATGTGGTGTC 59 16268375 16309737 TCTGAAGAAGACAGGTTTGG 59 NA Mus musculus 50 E430004N04Rik ENSMUSG00000049109 ENSMUST00000056097,ENSMUST00000105515,ENSMUST00000105516,ENSMUST00000060409 1 4 4 89 10 28442367 28442385 ATGGCTGAAATTTGTGAGG 58 28442438 28480974 GACCTTAAAGAGACCTGGA 57 NA Mus musculus 50 Ppm2c ENSMUSG00000049225 ENSMUST00000108299,ENSMUST00000095144 1 2 6 103 4 11889370 11892768 ACGAATTGGAATCCCAGTC 59 11889285 11889303 TCAGTTCACAGTTACGGAC 59 NA Mus musculus 50 Slc25a44 ENSMUSG00000050144 ENSMUST00000057935,ENSMUST00000107536 3 2 2 70 3 88224424 88224443 CCTTCTACCACTTCTATGCA 58 88219988 88220006 TTGAAAGACAATGTGAGGG 57 NA DesignNoJunction Mus musculus 50 C77080 ENSMUSG00000050390 ENSMUST00000052602,ENSMUST00000097873,ENSMUST00000106051 3 3 3 130 4 128899160 128899178 CTCTTACTGCTCCATCCAC 59 128898711 128899066 CTTCTGTGGATCTGAACCA 58 NA Mus musculus 50 Ptges ENSMUSG00000050737 ENSMUST00000102852,ENSMUST00000056046,ENSMUST00000113591 2 3 3 68 2 30756407 30756425 GTATTACAGGAGTGACCCA 57 30748317 30748335 TAGATTGTCTCCATGTCGT 57 NA DesignNoJunction Mus musculus 50 Fhad1 ENSMUSG00000051435 ENSMUST00000105780 3 1 4 82 4 141513540 141513558 CTTCAGCTGCAAGAAATGG 59 141511278 141513494 CTGAAGTTCTCTAGCTGGC 59 NA Mus musculus 50 Tmem198 ENSMUSG00000051703 ENSMUST00000113575,ENSMUST00000050899 2 2 2 165 1 75479711 75480959 ACACAGAAGTCGTCATCAG 59 75481088 75481106 CGTCTATAAGCAGGGTCAG 59 NA Mus musculus 50 Tubgcp6 ENSMUSG00000051786 ENSMUST00000109353 3 1 3 104 15 88935164 88935182 AGACCAGAAGTGCATTCAG 59 88934707 88934853 CCTGTAGATGTGACCTGAG 58 NA Mus musculus 50 Pkp3 ENSMUSG00000054065 ENSMUST00000106039,ENSMUST00000066873 3 2 2 154 7 148273683 148273702 CTTCTACAATGCTACTGGCT 59 148274292 148274389 TTTCCACACTCTTGTCCTC 59 NA Mus musculus 50 Ugt1a1 ENSMUSG00000054545 ENSMUST00000113138,ENSMUST00000113135,ENSMUST00000113134 1 3 11 93 1 90004290 90004308 TGTGTTCGAATATCCCAGG 59 90004364 90111627 TTCAAATTCCTGAGTCAGCT 59 NA Mus musculus 50 Zfp667 ENSMUSG00000054893 ENSMUST00000086327,ENSMUST00000108562 3 2 2 84 7 6245472 6245490 ATATCATCGCCTTGTTGGA 58 6245538 6256202 TTAGACCCTGATTCAGGAC 57 NA Mus musculus 50 9430031J16Rik ENSMUSG00000054976 ENSMUST00000113491,ENSMUST00000068275 3 2 4 104 1 81188711 81237464 CGAAACATCAAGGTGTCTG 58 81237530 81237550 CGTGCTAAGTTGAGTATTAGG 58 NA Mus musculus 50 BC042720 ENSMUSG00000055567 ENSMUST00000087318 3 1 5 130 1 66729743 66729761 AGTGTGGTAAGTGAACAGG 59 66729855 66739093 ATACTTGCCACCCTTTGAC 59 NA Mus musculus 50 1700008F21Rik ENSMUSG00000056018 ENSMUST00000108745,ENSMUST00000026912,ENSMUST00000108744 1 3 3 114 8 131660534 131662298 CAGCTATGTTACACAAAGCT 58 131669468 131669486 ATTTCACCTTCTAGCAGGT 58 NA Mus musculus 50 AI504432 ENSMUSG00000056145 ENSMUST00000070085 1 1 1 60 3 106851933 106851954 GGAGGGTACTCTTCATATTACG 59 106851974 106851993 GTTCCTCTTTATCTCCTGCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tatdn2 ENSMUSG00000056952 ENSMUST00000089018 2 1 3 130 6 113652519 113654032 AGTCACATACGAAGCACAC 59 113654125 113654144 TGAGTATTTCAGTGGGACAG 59 NA Mus musculus 50 Scn3a ENSMUSG00000057182 ENSMUST00000100069,ENSMUST00000066432 3 2 3 86 2 65321154 65321173 GCTATAGCATTGTGGAACAC 58 65320369 65321105 TATCTTCAAAGGCCAAAGC 57 NA Mus musculus 50 Musk ENSMUSG00000057280 ENSMUST00000081919,ENSMUST00000098057,ENSMUST00000084578 2 3 5 195 4 58369368 58379679 AACATAACAACATTCCCGTC 58 58379837 58379855 TCCATTCTTTCCTCCTTCG 58 NA Mus musculus 50 Zfp75 ENSMUSG00000057551 ENSMUST00000079042 3 1 2 91 9 19446473 19446491 TCTTGTCAGCAGAGTTTGG 59 19446545 19447058 TGAAATGTCACAGACTCCTG 59 NA Mus musculus 50 Lgals8 ENSMUSG00000057554 ENSMUST00000064217,ENSMUST00000099821,ENSMUST00000099820 3 3 3 84 13 12547200 12548618 TCAGAAAGATTCCAGGTTGAC 59 12547136 12547154 TGAACCGAGGGTTAAAGTG 59 NA Mus musculus 50 Prdm2 ENSMUSG00000057637 ENSMUST00000105778,ENSMUST00000075322 3 2 3 85 4 142701675 142721625 TGAAGGACTTGAGCTACAG 58 142701608 142701626 GACCTTTCTGCATTGTCTG 58 NA Mus musculus 50 Zfp82 ENSMUSG00000058447 ENSMUST00000078563 1 1 3 80 7 30847299 30847319 CAGATGTGATTTCCTTACTGG 58 30842530 30844304 TTTCCGAATTTGTTCTGCC 58 NA Mus musculus 50 Zfp74 ENSMUSG00000059975 ENSMUST00000108212,ENSMUST00000108211,ENSMUST00000108205,ENSMUST00000032797,ENSMUST00000085782 3 5 6 162 7 30723077 30728517 AGTCTGAGGGACTAGTGAC 59 30722687 30722706 ATCACTTCAGGTTTGGTGAG 59 NA Mus musculus 50 Arrb2 ENSMUSG00000060216 ENSMUST00000079056,ENSMUST00000108568,ENSMUST00000102564,ENSMUST00000084954,ENSMUST00000102563 2 5 5 80 11 70253395 70253672 AATTCGATACCAACTATGCC 57 70253715 70253733 CATCCTTCATTCCCTTCAG 57 NA Mus musculus 50 Gm839 ENSMUSG00000060416 ENSMUST00000079186 2 1 1 85 6 89164780 89164798 CTGATAGGGTCCAACTCAG 58 89162586 89162604 CATCATGACAGTGCTTAGG 57 NA DesignNoJunction, InUTR Mus musculus 50 Arl1 ENSMUSG00000060904 ENSMUST00000095348 3 1 3 104 10 88199868 88199886 ATGCAGTCATCTATGTCGT 58 88204658 88204738 ATTTGCCATTTCTCAGCTC 58 NA Mus musculus 50 Dnaic1 ENSMUSG00000061322 ENSMUST00000102963,ENSMUST00000038752 2 2 2 86 4 41552789 41552807 GAGAAGGCAAAGACTCCAG 59 41552855 41557249 GATATCATCACTCTGGGACTC 59 NA Mus musculus 50 Cfd ENSMUSG00000061780 ENSMUST00000061653 1 1 1 129 10 79354523 79354541 TGATGTGCAGAGTGTAGTG 59 79354775 79354793 CTCGTATTGCAAGGGTAGG 59 NA DesignNoJunction Mus musculus 50 Hsd3b3 ENSMUSG00000062410 ENSMUST00000090743,ENSMUST00000107018,ENSMUST00000107019 1 3 5 123 3 98546611 98547757 TCAATCTGAAAGGTACCCAG 59 98546507 98546525 CCATTCAGGACAATGTCCT 59 NA Mus musculus 50 Alg11 ENSMUSG00000063362 ENSMUST00000072572 2 1 2 89 8 23172522 23172540 CATACTGTAATGCAGGTGG 57 23175475 23175494 CAACATAAACTGCTTCAGGA 58 NA DesignNoJunction Mus musculus 50 Nup98 ENSMUSG00000063550 ENSMUST00000096648,ENSMUST00000070165 3 2 2 80 7 109295886 109300844 AAGGGCTAAATAGGAAGGC 59 109295824 109295844 GACTCTTTATTAAACACCGGG 58 NA Mus musculus 50 4430402I18Rik ENSMUSG00000064202 ENSMUST00000025872,ENSMUST00000112602 1 2 2 80 19 29012903 29013637 GGCGAACATAAAGGTTATCC 58 29012842 29012861 TCACTTGAATCTACAGGTGG 59 NA Mus musculus 50 Onecut1 ENSMUSG00000066477 ENSMUST00000085342 2 1 1 127 9 74696943 74696961 CAAAGCTGAAAGCTTGTCG 59 74698637 74698658 AGCAGCAGTAGTTAGAATTCTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 1700065O13Rik ENSMUSG00000067430 ENSMUST00000087654,ENSMUST00000087658 3 2 2 86 17 33158655 33158676 AACCTTTATGAACCTGATCTCC 59 33156906 33158414 ATCTGAGTTCTCAGACTTCTG 58 NA Mus musculus 50 Hdac8 ENSMUSG00000067567 ENSMUST00000087916 2 1 2 98 X 99600939 99600959 CCTTTAATATGACACCAGTGG 58 99598004 99600879 CAAGGTTATAGCCTCCTCC 58 NA Mus musculus 50 Cyp2d40 ENSMUSG00000068083 ENSMUST00000055721 3 1 1 61 15 82591597 82591615 ACTCATGATTCTGCATCCA 58 82591337 82591356 CTATGACCTCGTCGATTTCC 59 NA DesignNoJunction Mus musculus 50 Clec16a ENSMUSG00000068663 ENSMUST00000066345 2 1 6 80 16 10571683 10573396 GTCTACAAAGTGTCATTGGA 57 10573439 10573457 CAAATTGGAGAAGTACGGG 58 NA Mus musculus 50 Zfp87 ENSMUSG00000071285 ENSMUST00000004225 3 1 1 61 13 67621584 67621602 TTCAGTTGTGAAGAGACCA 58 67619028 67619046 GACATTTATAGGGCTTCCC 57 NA DesignNoJunction Mus musculus 50 Ppp1r3e ENSMUSG00000072494 ENSMUST00000100563 3 1 1 123 14 55491969 55491987 ATGTCAGGCTCCATATAGG 57 55491573 55491591 GCTACACAGAGAAACTCTG 57 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 2610002J02Rik ENSMUSG00000073684 ENSMUST00000105627,ENSMUST00000097747,ENSMUST00000105628,ENSMUST00000105626 3 4 4 122 4 154625047 154625065 AAATTCTGGTCGAACTCCC 59 154630249 154630267 CTATCCACATCTAGCTGGG 58 NA DesignNoJunction Mus musculus 50 1700029G01Rik ENSMUSG00000073758 ENSMUST00000094760,ENSMUST00000027786 1 2 3 80 4 125839264 125839711 GAAGTGATAAAGGAGGCCT 58 125839015 125839220 AGTTGCTCAACTTAGGAGG 58 NA Mus musculus 50 ENSMUSG00000074363 ENSMUSG00000074363 ENSMUST00000098800 2 1 1 67 9 47621997 47622015 CATATAGTCCGAATGAGCC 57 47609148 47609167 ACTATTGTGGTGTAATGTCC 57 NA DesignNoJunction, InUTR Mus musculus 50 EG229571 ENSMUSG00000074432 ENSMUST00000098885 3 1 1 60 3 92878108 92878126 GGTGAGACTAACAAACCGT 59 92878149 92878168 CATCTCTTTGAAGACTTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000015750 ENSMUSG00000074736 ENSMUST00000109935,ENSMUST00000109934,ENSMUST00000099263 2 3 4 96 2 149756771 149828923 CCCATGAGACAAACAAAGC 59 149828982 149829001 ATAGTAATGGACAGGACTGC 58 NA Mus musculus 50 Olfr1299 ENSMUSG00000074957 ENSMUST00000111004,ENSMUST00000099610 3 2 2 60 2 111504953 111504971 CAGATTCCCATGATTTGGA 57 111504992 111505013 CAAGATACAACTACAATCCCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV12-89 ENSMUSG00000076534 ENSMUST00000103335 3 1 1 61 6 68785013 68785033 GCTTTAAATTGGTATCAGCGG 59 68784972 68784990 GTTGCACCATAGATCAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-57 ENSMUSG00000076556 ENSMUST00000103357 3 1 1 83 6 69526041 69526060 ATCTGGGACCTCTTACTCTC 59 69525977 69525995 TAACTACTCCTTTGCTGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV5-1 ENSMUSG00000076761 ENSMUST00000103570 1 1 1 60 14 53242650 53242668 AGACTCAAAGACTCACCCT 59 53242692 53242710 GTAATGTGCAGGGAAAGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV6D-7 ENSMUSG00000076792 ENSMUST00000103602 1 1 1 60 14 53627643 53627662 TCAAGGGACAAAGAGAAAGG 59 53627682 53627703 TGGTCCCTTTATCATATGTAGC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Etohi1 ENSMUSG00000078882 ENSMUST00000108997 1 1 4 85 2 176224139 176224159 CCAAACTTCTAGAAGTCATGG 58 176221273 176221293 CTTCGTAGACTTTCTCTTCTG 57 NA Nonspecific, DesignNoJunction Mus musculus 50 Ccdc142 ENSMUSG00000079511 ENSMUST00000101253,ENSMUST00000101254 2 2 2 110 6 83057849 83057867 CTCTCACTCAGCATCTTCC 59 83057941 83058095 ATAACAGAGACAGCAACGG 59 NA Mus musculus 50 Hist1h3i ENSMUSG00000069310 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Pcp4 ENSMUSG00000000159 ENSMUST00000061739 1 1 3 101 16 96715463 96747004 CAGGAGATAATGATGGGCAG 59 96747068 96747086 TGAACTGAGACTGAATGGC 59 NA Nonspecific Mus musculus 50 Cttnbp2 ENSMUSG00000000416 ENSMUST00000090601,ENSMUST00000000426 2 2 2 80 6 18370818 18370836 CAGACCTAATTAACCACGC 58 18364290 18370774 CTAGGCAGTTCTTGAAACC 58 NA Mus musculus 50 Hoxa4 ENSMUSG00000000942 ENSMUST00000101395,ENSMUST00000070675 2 2 2 90 6 52140669 52141177 GTCAACTCCAGTTATAACGG 57 52140598 52140616 AGTGGAATTCCTTCTCCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Oas1c ENSMUSG00000001166 ENSMUST00000111858 3 1 1 197 5 121255583 121255601 AGAAACAACACGTATGCTG 58 121253058 121255424 CTCCTTACACAGTTGATACCA 59 NA DesignRelaxed Mus musculus 50 Tbx21 ENSMUSG00000001444 ENSMUST00000001484 1 1 1 80 11 96961393 96962804 AATGTGACCCAGATGATCG 59 96961331 96961349 CTCTCCATCATTCACCTCC 59 NA Mus musculus 50 Blvra ENSMUSG00000001999 ENSMUST00000002064,ENSMUST00000099411,ENSMUST00000110389 3 3 3 80 2 126906385 126908676 GAGTACTGAGCCAAAGAGG 59 126908719 126908738 TTCAAGTCCCTTATCCTCAC 58 NA Mus musculus 50 Ocel1 ENSMUSG00000002396 ENSMUST00000002469 2 1 1 217 8 73895884 73896384 TTAAGTACCCACCAGTGAC 58 73896679 73896698 TCGCTTCTTCTCAAACTCTC 59 NA DesignNoJunction Mus musculus 50 Il7r ENSMUSG00000003882 ENSMUST00000003981 1 1 1 86 15 9442786 9446097 CACAATAGTTAAAGCCGAGG 58 9442719 9442737 GGTGCATTAAATGTCACCA 58 NA Mus musculus 50 6430517E21Rik ENSMUSG00000004031 ENSMUST00000004133 1 1 1 80 1 160181421 160181439 CTATGGAAGACAGCTTGCT 59 160179631 160181377 TCTGGAATTCTTCGGACTC 58 NA Mus musculus 50 Ptpn6 ENSMUSG00000004266 ENSMUST00000004377,ENSMUST00000112484 1 2 2 80 6 124677808 124678142 AACATTCTTCCCTTTGACC 57 124677746 124677764 GGCATTGATGTAGTCAGAG 57 NA Mus musculus 50 Sh2b2 ENSMUSG00000005057 ENSMUST00000005188 1 1 1 60 5 136701165 136703254 AACACATTTGTGCTCAAGG 58 136701123 136701141 GTGAGTCTATCGTTTCCAG 57 NA DesignNoJunction Mus musculus 50 Fblim1 ENSMUSG00000006219 ENSMUST00000105785,ENSMUST00000105784,ENSMUST00000006381 3 3 3 104 4 141137005 141138979 GATTTCTACAGGAAATTTGCCC 59 141136922 141136940 GAAATTCCTTCCCATGCAC 59 NA Mus musculus 50 Crip2 ENSMUSG00000006356 ENSMUST00000084882 3 1 1 155 12 114382495 114382614 GAGAGTGTACTTCGCTGAG 59 114383047 114383067 AAGAGTATTCCATAGCAAGGC 59 NA Mus musculus 50 Stambp ENSMUSG00000006906 ENSMUST00000068054 1 1 1 85 6 83514247 83520311 CAACAAGTACATCACGCTG 59 83514180 83514199 CAGCATCTTTCTTCTCAGGA 59 NA Mus musculus 50 Homer1 ENSMUSG00000007617 ENSMUST00000109492,ENSMUST00000109489 1 2 10 88 13 94126027 94136211 CCACATAGTTCTTCAAGATGGA 59 94136260 94136278 AAATAACCAAGGCCAGAGG 59 NA Mus musculus 50 Stx5a ENSMUSG00000010110 ENSMUST00000010254,ENSMUST00000073430 1 2 2 80 19 8824504 8829404 GAAACGATTCAGAGGATCGA 59 8829444 8829465 GTACTTGAGGATCTCTGAATGG 59 NA Mus musculus 50 Wnt8a ENSMUSG00000012282 ENSMUST00000012426 2 1 1 91 18 34702089 34702192 TGGTCAGTGAACAACTTCC 59 34702535 34702553 TCTTCGATGCCAATCTGAG 59 NA DesignNoJunction Mus musculus 50 Elof1 ENSMUSG00000013822 ENSMUST00000013966 3 1 1 61 9 21918257 21918276 ACGAGAAGTCTTGTGATGTG 59 21918087 21918105 AGTACAGGAGATGACTCCA 58 NA DesignNoJunction Mus musculus 50 Nit1 ENSMUSG00000013997 ENSMUST00000111289,ENSMUST00000014141,ENSMUST00000111295 2 3 3 63 1 173273953 173274207 TTGAACAGCAAGGGATCAG 59 173273908 173273926 GGATCTCTACATCGCACAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Srp19 ENSMUSG00000014504 ENSMUST00000072576 1 1 1 93 18 34494142 34494160 GTGATGTTCAGTTTCGAGG 58 34494217 34495765 ATCACTGACTTACGTGACG 59 NA Mus musculus 50 Amdhd1 ENSMUSG00000015890 ENSMUST00000016034 1 1 1 60 10 92987243 92988604 ATCAATGCATCCAGATGGG 59 92987201 92987222 CAATTAATTCATGATGGCCTCC 59 NA DesignRelaxed Mus musculus 50 Dstn ENSMUSG00000015932 ENSMUST00000103172 2 1 1 130 2 143764393 143764411 GGAGTCCAGGAAAGAAGAG 58 143765761 143767880 GATACTCATGCTTTATACCTGG 58 NA Mus musculus 50 Wnt11 ENSMUSG00000015957 ENSMUST00000067495 1 1 1 70 7 105998981 105999000 ACTTCTGCATGAAGAATGAG 57 106001626 106001644 GTTGGAAGTCTTGTTGCAC 59 NA DesignNoJunction Mus musculus 50 Ccdc70 ENSMUSG00000017049 ENSMUST00000070649,ENSMUST00000017193,ENSMUST00000110740 2 3 3 60 8 23084005 23084025 AATACAGAACCTTCTGGAAGG 59 23084044 23084065 TCCCATAAAGCATTATCCTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Brca1 ENSMUSG00000017146 ENSMUST00000107228,ENSMUST00000017290 2 2 2 80 11 101395306 101395324 CAAGGTTTAGTCAGCTTGC 59 101393465 101395263 CATTTGTAAGCTGCATTCCC 59 NA Mus musculus 50 1300010M03Rik ENSMUSG00000017802 ENSMUST00000017946,ENSMUST00000107295 1 2 2 81 11 100959924 100960329 CTCTGAAGACCTAGATGGC 58 100959861 100959879 ATCCACGTTAATGGAAGGG 59 NA Mus musculus 50 Baiap2l2 ENSMUSG00000018126 ENSMUST00000018270 2 1 1 110 15 79101715 79101733 TACGAGATTGAGTATCGCC 58 79101074 79101641 CACACTCTCCTTCATCTCC 59 NA Mus musculus 50 Dullard ENSMUSG00000018559 ENSMUST00000108593,ENSMUST00000018703 3 2 2 169 11 69797785 69797803 TATCCTGCCCTTATCTCCT 58 69798030 69798248 TGTCTATTACCACCTTGAGG 58 NA Mus musculus 50 Cpsf4l ENSMUSG00000018727 ENSMUST00000100248,ENSMUST00000018872,ENSMUST00000106617 1 3 5 145 11 113563818 113564597 TTCTGCAAGGAAGTAGGTC 58 113563374 113563392 ACATTACTGGGATGGAACG 59 NA Mus musculus 50 Avpi1 ENSMUSG00000018821 ENSMUST00000018965 3 1 1 200 19 42199319 42199337 AGATAATCTGGGAGTGTGC 58 42198238 42198256 CTCTAGCACTTGTTCTCCG 59 NA DesignNoJunction Mus musculus 50 Isyna1 ENSMUSG00000019139 ENSMUST00000019283 3 1 1 100 8 73119079 73119097 GAACTTGGGTCTGGATGAG 59 73119161 73119268 TATCCCAGCCATCAAACAC 59 NA Mus musculus 50 Ptprk ENSMUSG00000019889 ENSMUST00000020042 1 1 1 80 10 28054354 28056239 TATCCTTGCGATAAATCTCCTC 59 28056278 28056298 GCACTGAAATGTAGCATTCTG 59 NA Mus musculus 50 Btbd11 ENSMUSG00000020042 ENSMUST00000105307,ENSMUST00000038045,ENSMUST00000105306,ENSMUST00000020231 2 4 4 99 10 85114412 85117232 ATCATGGAGCTTCTGTCTG 59 85117293 85117313 CACAGTTGTCAGTATTGATGC 59 NA Mus musculus 50 Gamt ENSMUSG00000020150 ENSMUST00000105363,ENSMUST00000020359 2 2 2 82 10 79722566 79722584 CACTGGATTATTGAGTGCA 57 79722399 79722520 AAGGGAACAACCTTATGTG 57 NA Mus musculus 50 Ltc4s ENSMUSG00000020377 ENSMUST00000101265,ENSMUST00000102772 3 2 2 77 11 50050598 50050711 ATCTTCTTCCACGAAGGAG 58 50050539 50050557 GTATCCCTGGAAATAGCGG 59 NA DesignNoJunction Mus musculus 50 Sap30bp ENSMUSG00000020755 ENSMUST00000021101 2 1 1 81 11 115796770 115796788 ACGAGAACAGTAAGCAGTC 59 115799366 115813294 GCTTCTGTGTTATCCTTTGG 58 NA Mus musculus 50 Gosr2 ENSMUSG00000020946 ENSMUST00000107013 1 1 2 161 11 103548027 103548855 AGACAGAATGCCAAACTCC 59 103540700 103547902 CTTCTGAGTCCCGTTAGTG 59 NA Mus musculus 50 Psmc1 ENSMUSG00000021178 ENSMUST00000021595 1 1 1 60 12 101354114 101354918 CAAGAAATTAAGGAGTCTGTGG 58 101354937 101354957 CCATCTCCTCGTAATACTCAG 59 NA DesignRelaxed Mus musculus 50 Edn1 ENSMUSG00000021367 ENSMUST00000021796 1 1 1 84 13 42400727 42402153 AAACTACGAAGGTTGGAGG 59 42402201 42402219 GGTCTCTATAGAGCTCAGC 58 NA Mus musculus 50 6530403A03Rik ENSMUSG00000021431 ENSMUST00000091641 1 1 1 105 13 38313171 38313189 AGTTCACGACATAGAAGGG 58 38313258 38318756 GTCTTTCTCCATCCCTCTC 58 NA Mus musculus 50 Ahrr ENSMUSG00000021575 ENSMUST00000022059,ENSMUST00000109640 1 2 2 96 13 74352950 74353200 TACTTAGCAGGAAAGAGCA 57 74352872 74352890 ATGAAGATCTGGCTAGAGC 58 NA Mus musculus 50 Pde4d ENSMUSG00000021699 ENSMUST00000079975,ENSMUST00000074103 3 2 2 89 13 110530709 110530727 CTTCCTGTACCGATCTGAC 59 110530777 110547796 TCATCTCCATGTATATCACTGG 58 NA Mus musculus 50 Anxa7 ENSMUSG00000021814 ENSMUST00000065504,ENSMUST00000100844 3 2 2 80 14 21277842 21277862 TCTACTATTCCATGAAAGGCG 59 21275814 21277801 CAAGGTCAATCTCACTTCGA 59 NA Mus musculus 50 Plau ENSMUSG00000021822 ENSMUST00000022368 3 1 1 80 14 21658765 21659003 ACACTGCTTCATTCAACTC 57 21659046 21659065 CCAGGATTATAGGAGCTCTC 58 NA Mus musculus 50 Ero1l ENSMUSG00000021831 ENSMUST00000022378 3 1 1 81 14 45907458 45907476 AAGCGGACCAAGTTATGAG 59 45905751 45907413 ACTTGTGGAAATCCTTCCA 58 NA Mus musculus 50 Adam7 ENSMUSG00000022056 ENSMUST00000022640 3 1 1 84 14 69136556 69136575 TCTACACATCTATGCAAGGA 57 69134735 69136512 GGTAGAAGATCCTTAACAACAC 58 NA Mus musculus 50 Fyb ENSMUSG00000022148 ENSMUST00000090461,ENSMUST00000110659 2 2 2 80 15 6602480 6602501 GTCACTCGAAGTTATACAAAGC 59 6602539 6608547 CGAAGGACATAACCATATTTGC 59 NA Mus musculus 50 5730557B15Rik ENSMUSG00000022237 ENSMUST00000044324,ENSMUST00000110410,ENSMUST00000075576,ENSMUST00000076942 2 4 4 61 15 31297009 31297028 CGAAGACTTCTCTAGTCTGC 59 31296967 31296985 GAGGGTAGAAGGAATCGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 1110020G09Rik ENSMUSG00000022253 ENSMUST00000067760,ENSMUST00000100790,ENSMUST00000100789 1 3 3 80 15 9036545 9036564 AGTATTCGAGAGCCAATAGC 59 9036606 9037991 AGAACGAACACAAACTTTGG 59 NA Mus musculus 50 Gtse1 ENSMUSG00000022385 ENSMUST00000023018 2 1 1 86 15 85704297 85705414 CTACAGTTAGAGCAGAGCTG 59 85705463 85705481 AAGAGCTCTCATCTGAGGA 59 NA Mus musculus 50 Rangap1 ENSMUSG00000022391 ENSMUST00000052374 2 1 1 90 15 81552332 81552350 AGAGAAGAAGTCTGAGCTG 58 81549344 81551046 TAGTGAGATCAGAGCTGGT 59 NA Mus musculus 50 Pycrl ENSMUSG00000022571 ENSMUST00000053918,ENSMUST00000023232 2 2 2 87 15 75749698 75749716 AGAAGCTAAACAAGTGCTG 57 75749253 75749271 GTTGGAGTGAGTAGTCTGG 59 NA DesignNoJunction Mus musculus 50 0610037P05Rik ENSMUSG00000022677 ENSMUST00000023357 1 1 1 85 16 14311216 14313919 CCTCATAGCAGAATCTGGTC 59 14311150 14311169 CCTTTGATTCTTCAAAGGCA 58 NA Mus musculus 50 Zbtb20 ENSMUSG00000022708 ENSMUST00000114694,ENSMUST00000079441,ENSMUST00000114691,ENSMUST00000114690,ENSMUST00000114695 1 5 5 80 16 43611035 43618445 GTACATACAGGTGAGAAGCC 59 43618485 43618506 CATGTGCTTGATAAGGTAATCC 59 NA Mus musculus 50 Donson ENSMUSG00000022960 ENSMUST00000023682 2 1 1 118 16 91681611 91682354 ATGCAAATGCTTAAGGCAC 59 91681511 91681532 CTCATAGAATGCAATGCATGAG 59 NA Mus musculus 50 Fhl1 ENSMUSG00000023092 ENSMUST00000023854,ENSMUST00000114769,ENSMUST00000116596,ENSMUST00000114773,ENSMUST00000114772,ENSMUST00000114768,ENSMUST00000114770,ENSMUST00000114771 3 8 8 82 X 54041278 54041298 GAAGTGCTTTGACAAGTTCTG 59 54041342 54042333 TATAATGCACCTCCTTGGC 59 NA Mus musculus 50 Ccl25 ENSMUSG00000023235 ENSMUST00000110982,ENSMUST00000024004 3 2 2 86 8 4353992 4354101 TGCTGTGAGATTCTACTTCC 59 4354150 4354168 GCTGTCAAGATTCTCATCG 58 NA Mus musculus 50 Tmem176a ENSMUSG00000023367 ENSMUST00000101426 3 1 1 102 6 48794165 48794671 CAAGCATGCTAAAGACCCT 59 48794735 48794755 CAGATGTAGACACATACAGGG 59 NA Mus musculus 50 Slc22a1 ENSMUSG00000023829 ENSMUST00000024596 3 1 1 80 17 12855734 12857264 GTATTACTGGTTTGTCCCAG 57 12855673 12855691 TGCTCCATTATCCTTACCG 58 NA Mus musculus 50 Fbxl17 ENSMUSG00000023965 ENSMUST00000024761,ENSMUST00000112840,ENSMUST00000112839 3 3 3 80 17 63429903 63574384 CACTGATTATGCACTGATAGC 58 63429843 63429863 GTGATTTCTTTACACCATCCG 59 NA Mus musculus 50 Slc3a1 ENSMUSG00000024131 ENSMUST00000024944 1 1 1 86 17 85459147 85459165 CGCCCATCACTTACTATGG 59 85459211 85460152 CAAGGGTAGTACTATCATAGCTC 59 NA Mus musculus 50 Sil1 ENSMUSG00000024357 ENSMUST00000025215 1 1 1 80 18 35477614 35484954 AGTACTATGTCCATCAGATGG 58 35477554 35477572 TGTTGAGCCCATTAATCAC 57 NA Mus musculus 50 Dcp2 ENSMUSG00000024472 ENSMUST00000025350 1 1 1 80 18 44565153 44565172 AATGACATGACTCCCAAGTC 59 44565213 44565316 CCTTAGTGGTCTGATAAAGGG 59 NA Mus musculus 50 Grpel2 ENSMUSG00000024580 ENSMUST00000062991 2 1 1 65 18 61878476 61879363 ATTTAACCCTGAGATACCAGAG 59 61878432 61878450 ATCTCTGGGTTCTTCTCCT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Cst6 ENSMUSG00000024846 ENSMUST00000025764 1 1 1 104 19 5348431 5348449 GAGAACACATGGACCTCAC 59 5347998 5348016 GAGTAGTGTTCTTCCAGGG 58 NA DesignNoJunction Mus musculus 50 Fn3k ENSMUSG00000025175 ENSMUST00000026175,ENSMUST00000092302,ENSMUST00000103014 3 3 3 161 11 121298724 121300603 GAAGAGCCTTAGCAGTCAG 59 121301421 121301439 GTGTGAAAGCCAAACTTGG 59 NA Mus musculus 50 Sfxn3 ENSMUSG00000025212 ENSMUST00000062213,ENSMUST00000111954 1 2 3 82 19 45126928 45126947 TGGAGAAGAAAGACTTCCTG 58 45128201 45128801 AAATACCAAGCAGAAGCCT 59 NA Mus musculus 50 Limd1 ENSMUSG00000025239 ENSMUST00000026269 2 1 1 80 9 123420385 123425901 ATCATGGACATGATCCTACAG 59 123425940 123425961 CAGACATTCATTACAGATGACG 59 NA Mus musculus 50 Rabgef1 ENSMUSG00000025340 ENSMUST00000026390 3 1 1 89 5 130666906 130673832 CAAGAAGGAAATTCAGGAAGC 59 130673882 130673901 ATGAACTCCTTAGTCACTCG 58 NA Mus musculus 50 Mbc2 ENSMUSG00000025366 ENSMUST00000026427,ENSMUST00000105234 3 2 2 84 10 127958884 127958902 TGTTCTTTATCAAACGCCC 58 127958078 127958679 GAGAGTGAGCTAAGTCCTG 58 NA Mus musculus 50 Pde6g ENSMUSG00000025386 ENSMUST00000026452 3 1 1 101 11 120311808 120311826 AAACAAGGCAGTTCAAGAG 58 120309475 120309921 AGATGACGGTGATATCTGTC 58 NA Mus musculus 50 MGI:1918324 ENSMUSG00000025762 ENSMUST00000099121,ENSMUST00000065411,ENSMUST00000026862 2 3 3 82 3 40840732 40842864 GTGTTGATCTCCCTTCTAGTG 59 40842906 40842926 AAGTGTATGGTGAATCCTCTC 59 NA Mus musculus 50 Aasdhppt ENSMUSG00000025894 ENSMUST00000051589,ENSMUST00000115732 3 2 2 257 9 4308793 4308811 TCGTTGAATCCATATCCCA 58 4302614 4303094 GAAGCTTTCTTTCAGTGCC 59 NA DesignNoJunction Mus musculus 50 Cdc42bpa ENSMUSG00000026490 ENSMUST00000097452,ENSMUST00000097450,ENSMUST00000076687 2 3 5 186 1 182047862 182064434 GGACCAATTTGAAATTGCAG 58 182066854 182066872 CTGTCTTATCAAACCGACC 57 NA Mus musculus 50 Sell ENSMUSG00000026581 ENSMUST00000027871,ENSMUST00000097491 1 2 2 80 1 165993195 165993215 GAGATGTGAGGGTACTTACTG 59 165993256 165995442 ATCAGGAAGTCACAACAGAG 59 NA Mus musculus 50 Nek6 ENSMUSG00000026749 ENSMUST00000112902,ENSMUST00000054234,ENSMUST00000112895 3 3 3 80 2 38413410 38413429 GTTCAGTGAGGTTTACAAGG 58 38413471 38414386 ATCATCTCAAAGATCTGCAC 57 NA Mus musculus 50 4930571C24Rik ENSMUSG00000026963 ENSMUST00000028340 2 1 1 210 2 25143777 25143949 CTTCAGCTGGAACCTACTG 59 25144496 25144514 TCTATGCGATCTTCCTGGA 59 NA DesignNoJunction Mus musculus 50 Ttc17 ENSMUSG00000027194 ENSMUST00000111238,ENSMUST00000111237,ENSMUST00000094801 2 3 4 81 2 94206732 94206750 GAGTCTGTCAGGTCTTCTC 58 94204837 94206687 GTTGTTTGTCCCTATACGC 58 NA Mus musculus 50 Mtch2 ENSMUSG00000027282 ENSMUST00000111470,ENSMUST00000111468,ENSMUST00000057216,ENSMUST00000111467 2 4 5 82 2 90695117 90695136 CTCATTACACATCCCTTCCA 59 90695633 90696971 CACAGTCCACAGTACTTAGAC 59 NA Mus musculus 50 1700037H04Rik ENSMUSG00000027327 ENSMUST00000089512 2 1 3 225 2 130979380 130979398 CAGTGTCAAGTAGGAGCTG 59 130975265 130977359 GAGTACATGAGACCCTTGAC 59 NA DesignRelaxed, InUTR Mus musculus 50 Nkx2-2 ENSMUSG00000027434 ENSMUST00000109969,ENSMUST00000067075 1 2 3 75 2 147010028 147010046 GACACAGGTCAAGATCTGG 59 147009971 147009989 CACCTCCATACCTTTCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Car3 ENSMUSG00000027559 ENSMUST00000029076 3 1 1 84 3 14868370 14868391 CCAAAGTATAACACCTTTGGAG 58 14868436 14869247 TCTCCCGTCCTATCTTCAG 59 NA Mus musculus 50 Pex5l ENSMUSG00000027674 ENSMUST00000108226,ENSMUST00000108224,ENSMUST00000108225,ENSMUST00000078226,ENSMUST00000108221 3 5 5 88 3 32853309 32853329 CCAAAGTACAAGTACCTTGTG 58 32852115 32853259 AGAACAGAGCTGTCAACTG 59 NA Mus musculus 50 Gmps ENSMUSG00000027823 ENSMUST00000029405 2 1 1 80 3 63802630 63805444 TGTTAAGAAGCCTCATACAC 57 63805486 63805505 GTAATTTGCATGAGCTTCTC 57 NA Mus musculus 50 Shox2 ENSMUSG00000027833 ENSMUST00000029422 3 1 1 81 3 66779442 66779783 TTCACAAAGGTGTCCTTATAGG 59 66779382 66779401 CTTAAAGCACCTACGTTGAC 58 NA Mus musculus 50 Lce1g ENSMUSG00000027919 ENSMUST00000029527 2 1 1 60 3 92554423 92554441 CATTGGGTGATGTCCTCTC 59 92554381 92554399 ATTTCAGCAACTCAGAGGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Npy2r ENSMUSG00000028004 ENSMUST00000098997 1 1 2 86 3 82344951 82345309 CTCCTAGAGTCATTGCTCTG 59 82344884 82344902 TGATCAGGAAGCTGATTCG 59 NA Mus musculus 50 Rps20 ENSMUSG00000028234 ENSMUST00000103009 3 1 1 80 4 3761823 3762094 ATGCCTACCAAGACTTTGAG 59 3761762 3761780 CATCTGGAATCGATCCCAG 59 NA Nonspecific Mus musculus 50 1700025O08Rik ENSMUSG00000028244 ENSMUST00000029906 3 1 1 73 4 22855443 22865275 TGTGAGAGTTTGAAAGTACC 57 22855389 22855407 ATGGAAATGCACATCTCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Col15a1 ENSMUSG00000028339 ENSMUST00000102917,ENSMUST00000082303,ENSMUST00000107732,ENSMUST00000107731,ENSMUST00000107730 2 5 6 80 4 47316795 47319591 ATCCAGAAACTTGGTCACAG 59 47319632 47319652 ATGAATGTCCCTTCTATGACC 59 NA Mus musculus 50 Wdr31 ENSMUSG00000028391 ENSMUST00000107452,ENSMUST00000030087 2 2 3 80 4 62118606 62119860 AAGACCATCAGATTATGGGAC 59 62118546 62118564 ACAATGGGTCTGGATATGC 59 NA Mus musculus 50 Kif24 ENSMUSG00000028438 ENSMUST00000108055,ENSMUST00000030148,ENSMUST00000051409 1 3 3 94 4 41344684 41347482 CAAACTGACTCAGGTCCTG 59 41344608 41344626 TATGCTCTGTGGCTATGTG 59 NA Mus musculus 50 Tmem59 ENSMUSG00000028618 ENSMUST00000030361 2 1 1 81 4 106860311 106863151 AAGAACAACTCATGTCCCTG 59 106863195 106863213 ATCATGTCACTCCAGAACG 59 NA Mus musculus 50 Pla2g2e ENSMUSG00000028749 ENSMUST00000030526 2 1 1 97 4 138308334 138309191 CATGATTGTCTGCACTGAG 58 138308255 138308273 TGTATGGGTGATCCTTGAG 58 NA Mus musculus 50 2310005N01Rik ENSMUSG00000028863 ENSMUST00000055213 1 1 3 168 4 124780119 124780137 CAGACTTCCACAATCAGGA 58 124780269 124786832 GAGACATTCATTCTGTGCC 58 NA Mus musculus 50 Wasf2 ENSMUSG00000028868 ENSMUST00000084241,ENSMUST00000097853,ENSMUST00000105912 3 3 3 83 4 132741011 132741526 AGAAGAAGTGTCACTACAAGG 59 132741570 132741589 TTCCTGTCAAAGAGCTTCTG 59 NA Mus musculus 50 Xrcc2 ENSMUSG00000028933 ENSMUST00000030773 3 1 1 91 5 25204072 25204090 GATGAAGATTCACCAGTGC 58 25198577 25198597 CGGGCTGTTAAATGATAAAGC 59 NA DesignNoJunction Mus musculus 50 Pank4 ENSMUSG00000029056 ENSMUST00000070953,ENSMUST00000030931,ENSMUST00000105632 3 3 3 98 4 154350695 154350713 TTATGGGACACTGACTGTG 58 154350775 154351325 TCTTTCTGCTTCACCTTGG 59 NA Mus musculus 50 Apbb2 ENSMUSG00000029207 ENSMUST00000068206,ENSMUST00000113715,ENSMUST00000087256 2 3 3 80 5 66703476 66704562 TGCTCCAAGATTATGGCTG 59 66703414 66703434 GAGACTCATATTGGTCCTCTC 59 NA Mus musculus 50 Mad1l1 ENSMUSG00000029554 ENSMUST00000031534,ENSMUST00000100508 1 2 3 132 5 140593202 140593220 ATTCTGCAAAGAGGAGGTG 59 140564780 140581475 GTTGTAGTCACCCTGTAGG 58 NA Mus musculus 50 Hibadh ENSMUSG00000029776 ENSMUST00000031788 1 1 1 133 6 52498913 52498931 CTGAATATGAGCTCCGGAC 59 52497046 52498816 AATCCCAGATCCTTAGCCA 59 NA Mus musculus 50 Gpnmb ENSMUSG00000029816 ENSMUST00000031840 1 1 1 80 6 48997382 48997401 ACTGTCTTTCGAAGATACGG 59 48997442 48997745 AGGGATCTGATCTGTTATCAC 58 NA Mus musculus 50 MGI:2685314 ENSMUSG00000029847 ENSMUST00000044387 1 1 1 91 6 34905933 34905951 AAATGTCATGGTTCCTGTG 57 34905117 34905878 CTAGCAGTACAGGGAAGAC 58 NA Mus musculus 50 Dusp11 ENSMUSG00000030002 ENSMUST00000032071 1 1 1 87 6 85899784 85900022 CATGTCAGAAAGAACCGGA 59 85899715 85899733 TGTTGGTGTAGACTTGCTC 59 NA Mus musculus 50 Reg3g ENSMUSG00000030017 ENSMUST00000032089 2 1 1 80 6 78416813 78416831 TTACATCAACTGGGAGACG 58 78416537 78416769 TTCAGAAATCCTGAGGCTC 58 NA Mus musculus 50 Prickle2 ENSMUSG00000030020 ENSMUST00000113447,ENSMUST00000113446,ENSMUST00000113445,ENSMUST00000032093 2 4 4 81 6 92366906 92370146 CTGTGATGAGATCATCTTTGC 59 92366845 92366864 CTCAAAGCAGCAGAAATGTC 59 NA Mus musculus 50 Glt8d4 ENSMUSG00000030074 ENSMUST00000032157 1 1 1 80 6 100737315 100748102 TTATTACAACCCAGAGTGTCTC 59 100748143 100748161 CAGTTGCTTCCATACATGC 59 NA Mus musculus 50 Slc6a13 ENSMUSG00000030108 ENSMUST00000064580 2 1 1 81 6 121282472 121283342 ACAATTGCTACAGGGACTG 59 121283386 121283405 ATGGAGAAGATAGCAAACCC 59 NA Mus musculus 50 Ptms ENSMUSG00000030122 ENSMUST00000032216,ENSMUST00000112444 1 2 2 149 6 124864728 124864951 GAAAGAAGTAGTGGAGGAGG 59 124864430 124864448 TCTTCAGCAGTTCTCTTCC 58 NA Mus musculus 50 Art4 ENSMUSG00000030217 ENSMUST00000032341 2 1 1 102 6 136802885 136802903 ATGAGCACGTATAACTGCC 59 136798137 136798156 ACGAGATAACAACAGTGACC 59 NA DesignNoJunction Mus musculus 50 Kcnj8 ENSMUSG00000030247 ENSMUST00000032374 2 1 1 80 6 142515015 142518533 AATGTCAGGTCATTCACGT 59 142514953 142514971 AGTCATCATTCTCCCTCCA 59 NA Mus musculus 50 Lrmp ENSMUSG00000030263 ENSMUST00000032396 3 1 1 83 6 145116623 145118271 TCTGCCAGATGAAGATGAC 59 145120031 145120049 ATGGTCACTCTTCGAAGAG 58 NA Mus musculus 50 Mlstd1 ENSMUSG00000030303 ENSMUST00000032443,ENSMUST00000111607 1 2 2 80 6 148087212 148087231 ATTTACATCCTCGTGAGACC 59 148087272 148094544 CTCAAACAGCTTACTGTTGAG 59 NA Mus musculus 50 2610207I05Rik ENSMUSG00000030655 ENSMUST00000032891 2 1 1 80 7 125299622 125300041 CTGAGATTAAGGTGAACTGG 57 125299561 125299579 ATTCATCTAAGCTGCTGTC 57 NA Mus musculus 50 Abcc6 ENSMUSG00000030834 ENSMUST00000002850 3 1 1 81 7 53261002 53264165 CTTCCATCAGGAAGAACAG 57 53260939 53260957 GATGGTTCTCACAGTTCTG 57 NA Mus musculus 50 Anks4b ENSMUSG00000030909 ENSMUST00000033201 3 1 1 71 7 127317581 127325429 TAATCTGCAGTAGAGGTGGA 59 127325463 127325481 AGGCTGCATAATGTAGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1700007B13Rik ENSMUSG00000030968 ENSMUST00000033267 2 1 1 80 7 126644013 126645116 CTTCTTCCAGGATTTAGAGGA 58 126643953 126643971 GCTCCAAACGTTAGTTCTG 58 NA Mus musculus 50 Aff2 ENSMUSG00000031189 ENSMUST00000033532 3 1 1 80 X 66798437 66947130 CAAGTGAAGTAAGCCTTACC 58 66978225 66978244 TAAATCCTGGAGTCAGATGC 59 NA Mus musculus 50 Slc25a4 ENSMUSG00000031633 ENSMUST00000034049 3 1 1 138 8 47293855 47293873 GAATGTGCACATTATCGTG 57 47292958 47293754 CGTGTACATAATATCAGCCC 57 NA Mus musculus 50 Cmtm1 ENSMUSG00000031876 ENSMUST00000077256 2 1 2 134 8 106833113 106833131 GAAGGTCTTGAGGATGGTG 59 106816675 106816693 CTAGTGCAGAGATCATGCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Ets1 ENSMUSG00000032035 ENSMUST00000058892 3 1 3 85 9 32472233 32472252 GACCTCTTTATCCACTCTGG 59 32472300 32536273 TGCACATTCCATGTCTGAG 59 NA Mus musculus 50 Pts ENSMUSG00000032067 ENSMUST00000034570 3 1 1 81 9 50334995 50335014 AAATGCAACAATCCGAATGG 59 50332866 50333369 TTCCTGTAACAGGATCAATCTC 59 NA Mus musculus 50 Cadm1 ENSMUSG00000032076 ENSMUST00000114548,ENSMUST00000114547,ENSMUST00000085909,ENSMUST00000034581,ENSMUST00000114542 3 5 5 84 9 47605552 47605570 GAAGTCAACTGTACTGCCA 59 47605617 47607463 CTGATTTGCCTTTGAGTTCC 59 NA Nonspecific Mus musculus 50 Sltm ENSMUSG00000032212 ENSMUST00000085386,ENSMUST00000049263 3 2 2 81 9 70424640 70427100 ATGGAAAGGTTCTAAGTGCA 59 70427144 70427162 GAAGACATGGTTACGATGC 58 NA Mus musculus 50 Phip ENSMUSG00000032253 ENSMUST00000034787 3 1 1 80 9 82799387 82800558 CTGTCTCAAAGAATCATGCTC 59 82799327 82799345 GGTAATTGTGCTGATTCGC 59 NA Mus musculus 50 Htr3a ENSMUSG00000032269 ENSMUST00000003826 3 1 1 80 9 48712844 48714399 CATCAATGAGTTTGTGGACG 59 48712783 48712802 TAGTTCTGAACTTCACCTCG 59 NA Mus musculus 50 Amotl2 ENSMUSG00000032531 ENSMUST00000035121 3 1 1 188 9 102631736 102631756 CAGAAGTATTTGGAAGAACGG 58 102631906 102632313 ATGGAGCACCTTCAATCTG 59 NA Mus musculus 50 Rbm5 ENSMUSG00000032580 ENSMUST00000035199 1 1 1 80 9 107656816 107658198 GAGCAGACAAGTTTGACTC 58 107656754 107656774 TATCACAGTAGTAATCCACGG 58 NA Mus musculus 50 Rbm11 ENSMUSG00000032940 ENSMUST00000046378,ENSMUST00000114253 1 2 2 161 16 75596912 75598423 TATCGGTTTGGGAGTTCTC 58 75599080 75599098 ATACTCTTGAGGTAAGGCG 58 NA Mus musculus 50 BC016579 ENSMUSG00000033187 ENSMUST00000036732 3 1 1 87 16 45648999 45649017 TGTGGATGGTCATTGTCAC 59 45640530 45648950 TCATCGATATACGTCACTCCT 59 NA Mus musculus 50 Frrs1 ENSMUSG00000033386 ENSMUST00000040260 3 1 1 80 3 116598452 116598471 ATACAACGTAACAGACACTC 57 116598514 116599608 AACATTAAGGCACCATGAG 57 NA Mus musculus 50 Ctdspl2 ENSMUSG00000033411 ENSMUST00000036647,ENSMUST00000110581,ENSMUST00000110578,ENSMUST00000110574,ENSMUST00000110572 2 5 7 154 2 121814627 121819091 TCTTAGATCTGGATGAGACAC 58 121829675 121829693 CATCTGAGACATTCGTTCC 57 NA Mus musculus 50 Piwil2 ENSMUSG00000033644 ENSMUST00000048129 2 1 1 80 14 70776517 70776536 CTCCTGATCACTTCGTAACC 59 70775840 70776474 GGTAGAAATCCACCCACTC 59 NA Mus musculus 50 Ccdc131 ENSMUSG00000034163 ENSMUST00000036044 2 1 1 80 10 114852784 114853801 CAATTAAGTACGCCTTCCG 58 114853844 114853863 ATCTAACATCGTCTGGAGTG 58 NA Mus musculus 50 Slc26a2 ENSMUSG00000034320 ENSMUST00000037603 2 1 1 90 18 61361397 61361416 TACATTAGACGGACTCTGTG 58 61359304 61361346 CATTGCTACCTGATAAACTCC 58 NA Mus musculus 50 Csta ENSMUSG00000034362 ENSMUST00000096090 2 1 1 65 16 36122444 36125069 CTTCATTAAGATGGATGTAGGG 58 36122400 36122419 CCAGAAAGATCCTTGAAGAC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Tmem30b ENSMUSG00000034435 ENSMUST00000042975 2 1 1 60 12 74646453 74646473 TCAACATCACCTACAACTACC 59 74646413 74646433 CTAAGAATGATGAGCTTGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr142 ENSMUSG00000034677 ENSMUST00000106584,ENSMUST00000045319 1 2 2 83 11 114665744 114665762 ATCTATTACAGCGTCCTGC 59 114667246 114667264 GTGATAGGAGGGTTTCCTG 59 NA DesignNoJunction Mus musculus 50 Mast4 ENSMUSG00000034751 ENSMUST00000091273,ENSMUST00000099202 1 2 2 80 13 103558039 103559856 CATCAGTGATGAAATCAACTGG 59 103557980 103557999 CTGAGGAGCAAGGTAATCAG 59 NA Mus musculus 50 Rg9mtd3 ENSMUSG00000035601 ENSMUST00000044673 3 1 1 171 4 45327271 45327895 CAACCAAGTGTTCGATATCC 58 45328029 45328047 TTTGGTCAAGACACCTCTG 59 NA InUTR Mus musculus 50 Tmprss11b ENSMUSG00000035861 ENSMUST00000038448 2 1 1 80 5 87094038 87094056 CTTACGTCAGATGCTGGAG 59 87093327 87093995 ACCTTACTGATTTCCGTGAG 59 NA Mus musculus 50 Skp1a ENSMUSG00000036309 ENSMUST00000093121 2 1 3 64 11 52050397 52050415 TTGCCAAACAATCTGTGAC 58 52051760 52051778 AGCATCTGATCCATACAGC 59 NA DesignNoJunction Mus musculus 50 Hif1an ENSMUSG00000036450 ENSMUST00000040455 3 1 1 83 19 44640443 44640462 CTGGATCAATAAACAGCAGG 58 44640508 44642834 GTCACATTTCCTTCCATGC 59 NA Mus musculus 50 Cpz ENSMUSG00000036596 ENSMUST00000038676 1 1 1 129 5 35850867 35850885 CAGAGCCTATGCTGATGTC 59 35849450 35850774 GTCAGACATACCTCCAGTG 59 NA Mus musculus 50 4921524J17Rik ENSMUSG00000036934 ENSMUST00000047749,ENSMUST00000109692 3 2 2 202 8 87933732 87933750 CTGATGAGAAGGCTTTCGT 59 87933548 87933566 CAGAGAAAGCAACCAAAGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zfp692 ENSMUSG00000037243 ENSMUST00000049353 1 1 2 88 11 58127491 58127509 TTCTGTGCTCGATCTTTCC 59 58127561 58127690 CATATCTCACACTGCAGGG 59 NA Mus musculus 50 Galnt6 ENSMUSG00000037280 ENSMUST00000052069 2 1 1 82 15 100525051 100525069 CTTAGGAGCTGTCAGTTCG 59 100523884 100525005 CTGATGAGTTGATCCTGGG 59 NA Mus musculus 50 Gm1964 ENSMUSG00000037336 ENSMUST00000085790,ENSMUST00000045921,ENSMUST00000095877 3 3 3 81 12 4873327 4873605 CATCATTCTGGTCTCAGCT 59 4873264 4873283 GAATGCAGATGTCTTCTTCC 58 NA Mus musculus 50 Kcnmb2 ENSMUSG00000037610 ENSMUST00000108244 2 1 2 109 3 31807432 32054985 ACGTAATTCTGCCACTTCC 59 32055057 32055076 CTGTAAGATGAAGAGGTCCG 59 NA InUTR Mus musculus 50 Prkci ENSMUSG00000037643 ENSMUST00000046401,ENSMUST00000108249 3 2 2 81 3 30940442 30942621 GAAGATTATGGCTTCAGCG 58 30942666 30942684 TATCAAACGGAGACCTTCC 58 NA Mus musculus 50 Iqch ENSMUSG00000037801 ENSMUST00000042322,ENSMUST00000080527 2 2 2 80 9 63356218 63360051 CATCATAGATGCCAACGTC 58 63356156 63356174 AGTTTCCTGTAGTACAGCT 57 NA Mus musculus 50 Wdr20a ENSMUSG00000037957 ENSMUST00000095410,ENSMUST00000109807 3 2 3 189 12 112017517 112017538 GAGTAAACCCATAGATAAGAGG 57 112017685 112031341 GGACTTGTCTATTAGTCTTTCC 57 NA DesignRelaxed Mus musculus 50 Crygn ENSMUSG00000038135 ENSMUST00000047119 2 1 1 275 5 24262088 24263644 AAAGATCACTCTGTACGAGG 58 24260075 24260093 TCTATGCGGAAATGCTCTC 59 NA DesignNoJunction Mus musculus 50 Snrk ENSMUSG00000038145 ENSMUST00000056150 2 1 1 96 9 122046633 122046651 GAAAGAAACTCACCACGAG 58 122046710 122066283 CTCCATATGTCTACTGCAGG 59 NA Mus musculus 50 Hoxa11 ENSMUSG00000038210 ENSMUST00000048026 1 1 1 60 6 52193539 52193557 TACCAAATACCAGATCCGA 57 52193497 52193515 TTTGTTGATGTAGACGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ncapd2 ENSMUSG00000038252 ENSMUST00000043848,ENSMUST00000112291 2 2 2 80 6 125139833 125139851 AAGTGGAGGTGTGAATCAG 59 125137161 125139790 GACTGAAATGCTCTAAGCTG 58 NA Mus musculus 50 ENSMUSG00000038594 ENSMUSG00000038594 ENSMUST00000095691 2 1 1 84 10 53017914 53017932 GGAGAATTGAGACCTTGGA 58 53016164 53017868 AGAACTTGAAGCTGTAGACTC 59 NA Mus musculus 50 AA673488 ENSMUSG00000038611 ENSMUST00000046688,ENSMUST00000106027 2 2 2 80 7 148440819 148440837 AGTAAGAGTGGGAGTACGA 58 148440880 148442405 GACTTCATTCTTCAGCTTCC 58 NA Mus musculus 50 Angptl6 ENSMUSG00000038742 ENSMUST00000043726 3 1 1 80 9 20678508 20679622 GACTCATATTCTGGTAACTGTG 58 20678449 20678467 TCCATTGAGGTTAGAGTGG 58 NA Mus musculus 50 Nlrp6 ENSMUSG00000038745 ENSMUST00000106045 3 1 1 109 7 148111008 148111026 TCTACAGCTCTCAAAGCAC 59 148111098 148112323 GTGTGACAAGATCAGAACAC 58 NA Mus musculus 50 Sema6c ENSMUSG00000038777 ENSMUST00000072810,ENSMUST00000090821,ENSMUST00000090823,ENSMUST00000079897,ENSMUST00000107217 1 5 5 85 3 94971391 94971557 CCAACAAGTTTCTGACATGG 59 94971921 94971941 GATGTAGTTGTAGCATTCGTC 58 NA Mus musculus 50 Mrps34 ENSMUSG00000038880 ENSMUST00000043907 2 1 1 127 17 25032640 25032743 ACTTTCAAAGGGAAGAGTGAG 59 25032832 25032850 AATCTGTCCTCTGGTTTCG 59 NA Mus musculus 50 Adrm1 ENSMUSG00000039041 ENSMUST00000061437,ENSMUST00000040492 2 2 2 60 2 179906903 179906923 CCCTTATTCACTTCTGTTGGA 59 179906943 179907571 ATAATCAAGTCATCCTCCACG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Wdr45 ENSMUSG00000039382 ENSMUST00000043045,ENSMUST00000116634,ENSMUST00000115689,ENSMUST00000115690,ENSMUST00000115686,ENSMUST00000115688,ENSMUST00000116633,ENSMUST00000115687 1 8 8 81 X 7303879 7304009 TCTGCAACTTGTGGATCTC 59 7304054 7304072 CACATCACTCTGATGTGCA 59 NA Mus musculus 50 Dse ENSMUSG00000039497 ENSMUST00000048010 3 1 1 81 10 33903549 33903567 ATCCTGAGAACACTGAAGC 59 33882784 33903505 TCTTTCACCAACCAACTAGG 59 NA Mus musculus 50 Atp8b1 ENSMUSG00000039529 ENSMUST00000025482 2 1 1 80 18 64714813 64714831 CGTGATTTATGAACGGCTC 58 64712816 64714771 GTCTCACTTGCAAAGATATCC 58 NA Mus musculus 50 Nphp4 ENSMUSG00000039577 ENSMUST00000081393,ENSMUST00000105647,ENSMUST00000047943 2 3 4 133 4 151858641 151862862 ATTAAGCAGGGAATCCTAGAC 58 151862957 151862975 TTAGAGGGTTGATTGGTGG 58 NA Mus musculus 50 Ralyl ENSMUSG00000039717 ENSMUST00000081617,ENSMUST00000108373 2 2 2 69 3 13776949 13776967 AAAGGTCGACATTGAAGCT 59 13776999 13777018 ATACCCTTTGTGAACAGAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nup43 ENSMUSG00000040034 ENSMUST00000040135 1 1 1 81 10 7389419 7390745 AAATAACCAGACCCTGTCC 58 7390790 7390808 ACTGCTATAGGAGGGACTG 59 NA Mus musculus 50 Bmf ENSMUSG00000040093 ENSMUST00000090219,ENSMUST00000110859 3 2 2 174 2 118358392 118370832 CTTCATACGCAACAACACC 59 118358236 118358254 AGTATCTGTCCTCCCAGAC 59 NA InUTR Mus musculus 50 Gbp6 ENSMUSG00000040253 ENSMUST00000045097 1 1 1 80 3 142207091 142208425 GAGTGAAGGCAAATCATGTC 59 142208466 142208486 CTTTGTCTGACTGCATAATGG 59 NA Mus musculus 50 Daam2 ENSMUSG00000040260 ENSMUST00000057610,ENSMUST00000086917 2 2 2 80 17 49619935 49620063 AGAAGTTTCGGAAAGAACAC 58 49619874 49619892 TCTCCAGTGTCTTTGTCTC 58 NA Mus musculus 50 Havcr1 ENSMUSG00000040405 ENSMUST00000081819,ENSMUST00000109224,ENSMUST00000109223,ENSMUST00000047568 2 4 4 80 11 46587179 46587197 GCTTCTATGTTGGCATCTG 58 46587238 46589003 TAAGTATGTACCTGGTGATAGC 58 NA Mus musculus 50 Manea ENSMUSG00000040520 ENSMUST00000041374 1 1 1 80 4 26256276 26256296 TAGAGCCATATAGCAATCGAG 58 26255439 26256237 CTGGATGGTTTCCATATTTGTC 59 NA Mus musculus 50 Aicda ENSMUSG00000040627 ENSMUST00000043301 3 1 1 203 6 122503916 122509495 CGATATGGACAGCCTTCTG 59 122511084 122511102 TCTGAGATGTAGCGTAGGA 59 NA DesignNoJunction, InUTR Mus musculus 50 Tmem146 ENSMUSG00000040828 ENSMUST00000112979,ENSMUST00000051258 3 2 2 82 17 56800721 56800740 TTTACGAGTACAAGGACCTG 59 56800785 56802094 ATTCTTCCACAGTTCCACC 59 NA Mus musculus 50 Vps41 ENSMUSG00000041236 ENSMUST00000072961 3 1 1 80 13 18903568 18906101 GGAACTTCCATCAAGATATGC 58 18906141 18906161 TATCTCAACATATCGGCTTGG 59 NA Mus musculus 50 Bdkrb1 ENSMUSG00000041347 ENSMUST00000041229 1 1 1 60 12 106842769 106842787 TGTTCATCAGCATCTTCCT 58 106842811 106842829 TATACCAGCAACCTGTAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rgl2 ENSMUSG00000041354 ENSMUST00000047503 2 1 1 100 17 34072185 34072308 TAACTGAAGCTCAGAGTCAC 59 34072371 34072389 TGTGATCACTAGTGTTGGC 59 NA Mus musculus 50 Serpina3h ENSMUSG00000041449 ENSMUST00000109960 2 1 3 295 12 105488397 105488415 ATGTGTCACCTTGGATAGG 58 105488674 105490902 CTATCCTCCTAAAGCCCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Coro2b ENSMUSG00000041729 ENSMUST00000048043,ENSMUST00000113985 2 2 2 93 9 62279263 62280171 ACTACAAGGTCCTCATCTG 57 62279188 62279207 GTATTGAAGGACATGCAGAG 58 NA Mus musculus 50 Smek1 ENSMUSG00000041846 ENSMUST00000048305 1 1 1 80 12 102280849 102281664 CAAACTTGATAGCATGCGG 59 102280787 102280808 ATCTCTTCTTCGTCTTCTAGTG 59 NA Mus musculus 50 Nol4 ENSMUSG00000041923 ENSMUST00000081423,ENSMUST00000069215,ENSMUST00000092015 2 3 3 80 18 22877650 22910438 ATAAAGCACAGGATGAAGC 57 22877588 22877606 CAGTAGCTGTTGAGTAGGT 58 NA Mus musculus 50 Flg ENSMUSG00000041991 ENSMUST00000050758 2 1 7 60 3 93081619 93083307 AGGCAGTCTTGAAGAATCC 59 93083330 93083349 TCTAGCATTTGCATGAAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 H1foo ENSMUSG00000042279 ENSMUST00000037831 1 1 1 98 6 115897902 115898629 GCAGCTTCAAACTAGTTCC 58 115898691 115898709 ATTTCTTGGAGCCTGTCTC 59 NA Mus musculus 50 Mgat3 ENSMUSG00000042428 ENSMUST00000044970 2 1 1 61 15 80042702 80042720 CTTTAAACTCGTGTCAGCC 58 80042745 80042763 TCTTGTCCTCATAGTCACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 9330129D05Rik ENSMUSG00000042647 ENSMUST00000041252,ENSMUST00000111776 1 2 2 95 5 122057259 122057383 ATGACTGATCGAAAGGTGG 59 122057182 122057202 CCACTTGTGACCATTTATGAC 59 NA Mus musculus 50 Apob48r ENSMUSG00000042759 ENSMUST00000039522 2 1 1 125 7 133731307 133731325 TCACAGCAACTGGAATGAG 59 133731498 133731517 GAGATTCGATGGAAAGAGGG 59 NA DesignNoJunction Mus musculus 50 Muc1 ENSMUSG00000042784 ENSMUST00000041142 3 1 1 82 3 89035487 89035507 GTGAAGTCACAGCTTATACAG 58 89035550 89035697 TGCATCTCATTCACTTTGAC 58 NA Mus musculus 50 Npy5r ENSMUSG00000044014 ENSMUST00000070810 3 1 1 60 8 69204985 69205005 CATCCAGTAAGGTTATTCCAG 57 69204945 69204964 GAGCTTTCTTCAGGTTTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr978 ENSMUSG00000044292 ENSMUST00000057161 3 1 1 62 9 39802192 39802210 GCTGTAGATGGAATTGTGG 58 39802236 39802254 CACAACAGGGTTGAGTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp407 ENSMUSG00000044356 ENSMUST00000051013 3 1 1 60 18 84730457 84730478 GTTTAGTGGTTCAACCAAAGAC 59 84730418 84730439 CTGAAAGGTAGAACAGAATCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pamci ENSMUSG00000044921 ENSMUST00000055355 1 1 1 73 10 101975218 102007459 GATCTCCAACTAAAGACATGG 58 102007494 102007512 GACAATCTTCTCGTCCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1161 ENSMUSG00000045150 ENSMUST00000054845 3 1 1 60 2 87865512 87865533 CTCTACTCATCATCCTTCTGTC 59 87865553 87865572 GATTGCATCTTGAGTATGGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ifne1 ENSMUSG00000045364 ENSMUST00000056014 2 1 1 60 4 88526022 88526042 GGTTTCTTCCACTATCTTCTC 57 88525982 88526001 GTTCATCCACAATTGGAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc16 ENSMUSG00000046010 ENSMUST00000056677 2 1 1 60 11 82578649 82578668 ATCAGATGGACAAAGAGTGG 59 82578691 82578709 GAGATAGTGTTGACTTGCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 2310010M20Rik ENSMUSG00000046345 ENSMUST00000093183 3 1 1 196 16 32271716 32271736 CTGATATCCTTGAAGGAAGCA 59 32273391 32273816 AGTTCCATTGAGGTGAACC 59 NA DesignNoJunction Mus musculus 50 A930001M12Rik ENSMUSG00000046593 ENSMUST00000049655 3 1 1 60 4 40421563 40421582 CAGTATCATCGTTTGCTCCT 59 40421603 40421623 GATGTAGCAACAGTATCTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ckap4 ENSMUSG00000046841 ENSMUST00000053871 1 1 1 60 10 83991247 83991265 TATCAATGACAACATCGCC 57 83991205 83991223 ATTGATCTCCTTCTGGCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 2610303G11Rik ENSMUSG00000046995 ENSMUST00000061643 2 1 1 64 9 98087237 98087365 CATAGCTACAGGTGTCCTG 59 98087191 98087210 TTCACAACACATTTGCTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr68 ENSMUSG00000047415 ENSMUST00000110065 3 1 3 70 12 102126211 102126229 TTGAGCTGTAGGAGTACAG 57 102117588 102117606 CAGGATCTAGGCATCACTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Cmya5 ENSMUSG00000047419 ENSMUST00000062122 1 1 1 80 13 93820145 93820163 TCTTCTATGTGAGAGCCAC 58 93818922 93820101 ATCTAGTTCCTCTGGTGGA 58 NA Mus musculus 50 Gpr81 ENSMUSG00000049241 ENSMUST00000051138 1 1 1 60 5 124329147 124329165 TCTTCTGATGGAGAGTCAC 57 124329105 124329123 GATGAAGCTCTCACAGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700104B16Rik ENSMUSG00000049476 ENSMUST00000079376 2 1 1 62 8 34841263 34841281 CATTTCAAAGCCTGCTCAC 59 34841219 34841238 AAGAATGAGTAATCGGTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp280b ENSMUSG00000049764 ENSMUST00000061617 1 1 1 60 10 75502181 75502199 TGAAAGACAATCACAAGCC 58 75502223 75502241 GACCTGTACTTACAGACCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 4930486L24Rik ENSMUSG00000050345 ENSMUST00000091569 2 1 1 84 13 60955173 60955191 ATTGAGCTGCATAATTGGG 58 60955014 60955126 CTGTATTGGTCAAATCACCA 57 NA Mus musculus 50 Gpr119 ENSMUSG00000051209 ENSMUST00000053970 2 1 1 60 X 46027376 46027396 CTAACCATCCTCATCATTGCT 59 46027336 46027355 AGATTGATAGCAGCATAGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1184 ENSMUSG00000051424 ENSMUST00000050038 1 1 1 60 2 88327605 88327623 GCATCTCATATCACTGTGG 57 88327645 88327665 GTCTAAGGTAAGCAAAGATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG331392 ENSMUSG00000051537 ENSMUST00000089189 2 1 1 60 X 20938214 20938235 TCTTGGACATCTATAGCTTCTG 59 20938255 20938274 GACTGTAATTTCACCGTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 C230029F24Rik ENSMUSG00000051616 ENSMUST00000056879 3 1 1 142 1 49367799 49392218 CGAGCATGAAGTTAGTAATGC 59 49394934 49394953 CAATGATGTCACCAGATGGA 59 NA Mus musculus 50 Pabpc2 ENSMUSG00000051732 ENSMUST00000063219 3 1 1 60 18 39934735 39934753 CTCTTCACACGTTCAAGTC 58 39934777 39934795 TGTTATCTGTGCTGATGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Slc39a1 ENSMUSG00000052310 ENSMUST00000015467 3 1 1 93 3 90055859 90055877 CTCAGTATTTGAGGGCCTG 59 90055934 90055952 CAGAATGCCTTTGTGAAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2700081O15Rik ENSMUSG00000053080 ENSMUST00000065325 3 1 1 132 19 7497322 7497342 AATACTTGATGGACTACGACG 59 7497436 7497454 GTGAAGTCCATGGAGAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ptprt ENSMUSG00000053141 ENSMUST00000109445,ENSMUST00000109443,ENSMUST00000109442,ENSMUST00000109441,ENSMUST00000080004,ENSMUST00000073084 3 6 6 80 2 161727226 161727246 GAGAAGATCTACATCCAGTGG 59 161637855 161727186 CACAGCCTTGTAGTTAATCTC 58 NA Mus musculus 50 9030619P08Rik ENSMUSG00000053168 ENSMUST00000096397 3 1 1 147 15 75261838 75261856 CTCATGCTACAAAGTCCTG 57 75258600 75260390 TCTGAGAGTCATCCATTCAG 58 NA InUTR Mus musculus 50 Btn2a2 ENSMUSG00000053216 ENSMUST00000041541,ENSMUST00000110432,ENSMUST00000110433 3 3 3 80 13 23573806 23574599 TTCTCATTCCAGAATCCTTCG 59 23573746 23573764 TCAGCATTACTACAGGCAG 59 NA Mus musculus 50 ENSMUSG00000053640 ENSMUSG00000053640 ENSMUST00000066196 3 1 1 60 1 42287785 42287803 AACATGGCTTTGACAAGTG 58 42287824 42287845 TGGAATAGGTCACCTTATACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Afp ENSMUSG00000054932 ENSMUST00000042755 3 1 1 84 5 90936881 90936899 TGTCACTGCAGATTTCTCG 59 90936947 90937464 CTTTGGACCCTCTTCTGTG 59 NA Mus musculus 50 Pdlim1 ENSMUSG00000055044 ENSMUST00000068439 2 1 1 64 19 40297255 40297552 AACTGGTATTGTTGGTGTG 57 40297209 40297227 ACACATAGCATTCAGGGTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Pld5 ENSMUSG00000055214 ENSMUST00000065967,ENSMUST00000111167 1 2 2 80 1 177975014 177975032 CTGGATTGTGGACAAACAG 58 177924167 177974970 CCGAGTTCTTTCATCTGTC 57 NA Mus musculus 50 Snupn ENSMUSG00000055334 ENSMUST00000068856 2 1 1 91 9 56818413 56818431 ACACTAAGAGTGGCTACTG 58 56818486 56823030 AATGGTGTAGTCTTTGGCT 58 NA Mus musculus 50 Fut9 ENSMUSG00000055373 ENSMUST00000084770 3 1 2 114 4 25547967 25636194 CATGCTATGTTCTCTACACTG 58 25547873 25547892 ATAAATGAGCAGACATGCCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Ccl25 ENSMUSG00000055951 ENSMUST00000098949 1 1 2 115 8 4327893 4347731 ATAGGTTCTGGTTTGCCAC 59 4347810 4347828 GATCCATGAGCTTCTCAGG 59 NA DesignNoJunction Mus musculus 50 Clca1 ENSMUSG00000056025 ENSMUST00000059091,ENSMUST00000029932 3 2 2 85 3 144399936 144399954 GGAGGCTGAGTTTATAGGT 58 144393908 144399888 TGTATCTATGTGCTCTTCCA 57 NA Mus musculus 50 BC018473 ENSMUSG00000056032 ENSMUST00000069893 2 1 1 60 11 116615771 116615790 GTACAAGGAAATGCCATGTC 59 116616616 116616634 GGTCATCTGCATATTGGAG 57 NA DesignNoJunction, InUTR Mus musculus 50 Dennd1b ENSMUSG00000056268 ENSMUST00000094505,ENSMUST00000071518 3 2 3 81 1 141039456 141040478 CTGAAACACAAGGACAATGAG 59 141040518 141040539 CATTGTGTAAAGTGTACACTGG 59 NA Mus musculus 50 C330011M18Rik ENSMUSG00000056753 ENSMUST00000071067 3 1 1 73 8 86590233 86590251 AATTCGTTGACTTCACAGG 57 86590178 86590196 CGACTAGAATCGTACCAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4922501C03Rik ENSMUSG00000056919 ENSMUST00000093802,ENSMUST00000078660 2 2 2 80 9 87120768 87121999 AAATGAACCAGACTTCCAG 57 87120706 87120724 CCTTCTTACATGGAACCTG 57 NA Mus musculus 50 BC051142 ENSMUSG00000057246 ENSMUST00000114169,ENSMUST00000097347 3 2 7 157 17 34574132 34574151 CAAGTCCTTATCCGAACCTC 59 34580391 34580991 TACATTGTACAATAGGTCCAGG 59 NA Mus musculus 50 Sphk2 ENSMUSG00000057342 ENSMUST00000107738,ENSMUST00000107737,ENSMUST00000072836 1 3 3 120 7 52967914 52967932 ATTGGTCAATCCCTTTGGG 59 52967708 52967830 ATGGTTCTGTCGTTCTGTC 59 NA Mus musculus 50 Olfr135 ENSMUSG00000057801 ENSMUST00000076245 2 1 1 60 17 38345907 38345926 GGACATGTTCCTCTCATCTC 59 38345948 38345967 TACATACTAATACCTGGGCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 EG668236 ENSMUSG00000057805 ENSMUST00000078832 3 1 1 72 X 88821217 88821235 ATAAGACCATGCCTCTGAG 58 88821163 88821182 TCTTCTTAGTTGCTTTCACC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rpl23a ENSMUSG00000058546 ENSMUST00000102483 3 1 1 83 11 77994722 77994933 CAATACCCTGATAAGGCCC 59 77994657 77994675 TTGTTGGCAACATCTAGGG 59 NA Nonspecific Mus musculus 50 Olfr952 ENSMUSG00000058856 ENSMUST00000073895 2 1 1 60 9 39233834 39233852 TGGACCAATGGAAAGTGTC 59 39233792 39233810 ATGAGATTCAACACAGGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr317 ENSMUSG00000060030 ENSMUST00000075607 3 1 1 60 11 58545992 58546010 GTTACATTGTAAGAGCGGT 57 58545950 58545968 TTAAATGCTTTCTGCCGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sip1 ENSMUSG00000060121 ENSMUST00000021379,ENSMUST00000072021 1 2 2 80 12 60117876 60117895 TGAAGGTTACTCTCCAACAC 59 60117938 60118168 TGCTTGTGTACACTCTGTC 59 NA Mus musculus 50 V1ri5 ENSMUSG00000060490 ENSMUST00000074992 3 1 1 60 13 23228491 23228512 CCACTTGGCATTATCTAATCTG 58 23228530 23228551 TGTGACTATATCTGTGACTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr174 ENSMUSG00000060663 ENSMUST00000079955 2 1 1 60 16 58824472 58824490 TAGGATTCTCAGACCACCC 59 58824430 58824451 TAGATGGTAGATAACACCAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930595M18Rik ENSMUSG00000060673 ENSMUST00000080083 2 1 1 80 X 78666434 78667923 CTCGAATAGATGTGGAGCA 58 78666372 78666392 TGTTGTAGGGAGTTAAGTTGG 59 NA Mus musculus 50 Lyg2 ENSMUSG00000061584 ENSMUST00000078307 1 1 1 86 1 37966932 37967916 CTGATGAACTGTGGGATCC 59 37966864 37966882 TTCTTTGATGAGGATCCGG 59 NA Mus musculus 50 Ppp4r1 ENSMUSG00000061950 ENSMUST00000073104,ENSMUST00000112782,ENSMUST00000097293 1 3 3 83 17 66187070 66187088 GATTACCTACGACCCATCG 59 66187134 66187238 TTCACTGACCAACTTGTAGG 59 NA Mus musculus 50 Rpl34 ENSMUSG00000062006 ENSMUST00000062601,ENSMUST00000079085 3 2 2 95 3 130431994 130432012 CACCTAAATCTGCATGTGG 58 130431718 130431736 GCTTCTGTGTCTTAGACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Phactr2 ENSMUSG00000062866 ENSMUST00000105547,ENSMUST00000105546,ENSMUST00000105543,ENSMUST00000105544,ENSMUST00000105545,ENSMUST00000094661,ENSMUST00000079698 1 7 7 83 10 12986833 12986852 GAGGAAGATATCCACCAGAC 58 12981721 12986788 ACATCTCCATCTTGATCAGG 58 NA Mus musculus 50 Klhl24 ENSMUSG00000062901 ENSMUST00000023509 1 1 1 80 16 20116010 20116028 TGGATCAGAGTTGCTTCTC 58 20116070 20117955 GCCAACAACATACACTTTACC 59 NA Mus musculus 50 B230315N10Rik ENSMUSG00000062931 ENSMUST00000041264 3 1 1 112 10 81690565 81690583 GATGTCATGCTGGAAACCT 59 81689327 81690285 GAGTTGAAATACCTTCCATGTC 59 NA Mus musculus 50 Olfr1287 ENSMUSG00000063377 ENSMUST00000075390 1 1 1 60 2 111289300 111289318 TGGAAGAAACAAACCAGAC 57 111289341 111289360 TTTGAAGCACAAATTCCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-133a-1 ENSMUSG00000065399 ENSMUST00000083465 3 1 1 85 18 10782964 10782982 AATGCTTTGCTAAAGCTGG 59 10782897 10782915 TCAATGCATAGCTACAGCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-let-7a-2 ENSMUSG00000065614 ENSMUST00000083680 1 1 1 60 9 41344809 41344827 CCAGGTTGAGGTAGTAGGT 59 41344851 41344869 GGCTGTACAGTTATCTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Defcr20 ENSMUSG00000065957 ENSMUST00000084041 3 1 1 60 8 22639628 22639647 GAGACTAATACTGAGGAGCA 57 22639670 22639688 CTCCAAAGGAGACAGACAC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Slc31a2 ENSMUSG00000066152 ENSMUST00000107468,ENSMUST00000107469,ENSMUST00000084530,ENSMUST00000107467 2 4 4 68 4 61957086 61957104 CTTCAGACAATAGGACCCG 59 61958033 61958052 GAATGACATGGACTAGGGAC 59 NA DesignNoJunction Mus musculus 50 Irx6 ENSMUSG00000066273 ENSMUST00000106909,ENSMUST00000084817 2 2 3 60 7 109862016 109862034 ATCTACAGTGTCAAGTCCA 57 109861974 109861993 CTTTCCTACTTAGCACTCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 4921517D21Rik ENSMUSG00000066368 ENSMUST00000085073 1 1 1 60 9 107833905 107833923 TGACTCAGCTACTCTTGTC 58 107833947 107833965 ATCTGTCTGATGATCCCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Clec4b2 ENSMUSG00000067767 ENSMUST00000088455 2 1 1 81 6 123123757 123131319 AGTTGTGTAGTGACTTACCA 58 123131362 123131381 TGAGATTGGAATGGTATGTG 57 NA Mus musculus 50 Cenpm ENSMUSG00000068101 ENSMUST00000089157 3 1 2 131 15 82070376 82071765 CAAATACAGTCTCCAGAAAGTG 58 82069772 82069791 ATAACTGTGTTCTGGTGGAC 59 NA Mus musculus 50 V1rb4 ENSMUSG00000068230 ENSMUST00000089417 2 1 1 61 6 89843799 89843817 AGTTACTCCAGAACAAGCA 58 89843840 89843860 CTGATAAGAAAGGTTTCCCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr88 ENSMUSG00000068696 ENSMUST00000090473 3 1 1 164 3 115955563 115955581 AGAATGACCAACTCCTCCT 59 115955417 115955436 ATAGATGACCATACCGTTGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Cry2 ENSMUSG00000068742 ENSMUST00000090559,ENSMUST00000111278 2 2 2 80 2 92264755 92264773 TATGAAGATGGCCAAGGAG 58 92263211 92264712 TCGATGATTCTGTCTAGGTC 58 NA Mus musculus 50 Gm128 ENSMUSG00000068860 ENSMUST00000090815 3 1 1 206 3 95044056 95044074 TCTGTTCTGACCATAGCTG 58 95041148 95043887 CTACTGGTTGAGTCTCTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gapdh ENSMUSG00000070025 ENSMUST00000093496 1 1 1 60 8 60029169 60029187 GCAAAGTGGAGATTGTTGC 59 60029209 60029229 ATGTAGACCATGTAGTTGAGG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Gm484 ENSMUSG00000070564 ENSMUST00000107742 1 1 1 80 7 52947720 52947739 GTCAAGGCTATTGCAATGTC 59 52947782 52949374 CGTGCAGAACATAATCCTG 58 NA Mus musculus 50 Utp3 ENSMUSG00000070697 ENSMUST00000090413 1 1 1 60 5 88984313 88984331 CATAGAAGACCTCCAAGCC 59 88984353 88984373 CTGTAACAAGGGTTCTAACTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Sars2 ENSMUSG00000070699 ENSMUST00000094632 3 1 1 84 7 29535104 29535206 ATCACTTCACTAAGGTGGAG 58 29535253 29535271 AGAGACAGGAACTCATCCA 59 NA Mus musculus 50 Ceacam20 ENSMUSG00000070777 ENSMUST00000094753 2 1 1 80 7 20559785 20561384 AGCTCACCATCAACTATGG 59 20561428 20561446 TTGCCTCAATAGTGCTGAC 59 NA Mus musculus 50 Gltscr1 ENSMUSG00000070808 ENSMUST00000094821 3 1 1 81 7 16560806 16561029 AACGACTACCATAAAGTGGA 58 16560744 16560762 ATTTATTGAGCATGGCCTG 58 NA Mus musculus 50 4930578N16Rik ENSMUSG00000070883 ENSMUST00000094942 2 1 1 81 2 69620053 69620072 AAAGAAAGAAGGCCATTGAG 58 69619879 69620009 AGAAGTCCTGAGTGAAAGC 59 NA Mus musculus 50 D19Ertd721e ENSMUSG00000071655 ENSMUST00000096255 3 1 1 81 19 8946767 8948011 CAGACCAAGAGAATGTTGG 58 8948056 8948074 CTCGTTCTAAAGCTTCTCG 57 NA Mus musculus 50 D330050I16Rik ENSMUSG00000071688 ENSMUST00000093445 2 1 1 224 19 5388511 5388530 CTTGTGTTTCTTATGCTCGC 59 5388717 5388735 TCTTAGTTTCCGGCAACAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Gpr174 ENSMUSG00000073008 ENSMUST00000101294 3 1 1 86 X 104451763 104451781 AGTAGCATCCTCATTGGAG 58 104451831 104464231 TTCATTCATGCCGTTTCAG 58 NA InUTR Mus musculus 50 6030426L16Rik ENSMUSG00000073184 ENSMUST00000101568 1 1 1 114 12 20439188 20439206 GTGCATGTGAACTTCACTG 59 20439283 20439504 AAGTGTAGCCTATAACCGTG 59 NA Nonspecific Mus musculus 50 EG628994 ENSMUSG00000073229 ENSMUST00000086799 1 1 1 60 9 71908874 71908892 CCTGATAAAGCTCGAAGAC 57 71908913 71908934 GAATCCTGTAAATGACATAGCC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 EG667705 ENSMUSG00000073234 ENSMUST00000101627 1 1 1 63 5 5575319 5575337 TAAGGAGGTGGTTCTACCT 58 5575364 5575382 AAGTCAGCATCAGTGAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073560 ENSMUSG00000073560 ENSMUST00000097572 2 1 1 60 1 135726588 135726607 AAGCTACAAGAGACAGAGTC 58 135726630 135726648 CAAGCATGAGCATACAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 G430095P16Rik ENSMUSG00000074203 ENSMUST00000098571 1 1 1 60 8 87250646 87250664 GGCAAAGCACCTTTATCTG 59 87250688 87250706 CAGCTGAGAGCTAATAGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Spint2 ENSMUSG00000074227 ENSMUST00000098604,ENSMUST00000108236 1 2 3 80 7 30043595 30044426 ACTATGAAGAATACTGTGTCCC 59 30043536 30043556 TTTCAGTGTCATAGTACCAGC 59 NA Mus musculus 50 Hspa12b ENSMUSG00000074793 ENSMUST00000099349,ENSMUST00000100763 1 2 2 177 2 130959850 130961541 TGTATATCAGCTCTAGCCCA 59 130962728 130962746 GATGTGGTTCCAAAGTCGA 59 NA Mus musculus 50 ENSMUSG00000074810 ENSMUSG00000074810 ENSMUST00000099389 1 1 1 60 10 86753793 86753814 TTTGACTACCTCACTCTTTACC 59 86753833 86753853 AAAGGTTTAAGTGAGGACAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gabrr3 ENSMUSG00000074991 ENSMUST00000114341,ENSMUST00000099653 1 2 2 80 16 59434461 59434482 CTTTCTCAGTTCTTCATTGAGG 58 59434522 59440318 CAGTCTATAGTACCACCCTG 58 NA Mus musculus 50 Olfr1195 ENSMUSG00000075121 ENSMUST00000099818 3 1 1 60 2 88523077 88523099 CCCTATGGACAAGATGATATCTG 59 88523039 88523058 CAGAGGGTTTAGGAAAGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1085 ENSMUSG00000075176 ENSMUST00000099879 2 1 1 60 2 86498451 86498469 ACTAATGTGGACTCCAGTC 58 86498409 86498427 TGAAAGCCAGATGTTTGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1085 ENSMUSG00000075176 ENSMUST00000099879 3 1 1 67 2 86498449 86498467 TAATGTGGACTCCAGTCTC 57 86498400 86498418 CAAGATCAGTGAAAGCCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Amd1 ENSMUSG00000075232 ENSMUST00000099945 3 1 1 80 10 40009970 40009988 TGATCAGGAAAGTTGTGGA 58 40009260 40009926 TGCGACATTTAGAACTCTG 57 NA Nonspecific Mus musculus 50 2310015D24Rik ENSMUSG00000075400 ENSMUST00000100177 1 1 1 73 16 13519307 13519325 TTCCAGTGTTCATACAGGG 58 13516555 13516573 AAGGACCTCCTGTATGGAG 59 NA DesignNoJunction Mus musculus 50 ENSMUSG00000075480 ENSMUSG00000075480 ENSMUST00000100326 1 1 1 82 11 106022181 106022199 CCTATCTGAAAGGACCCAC 59 106022245 106022263 ACAACTCCAGCCTAAATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 D730005E14Rik ENSMUSG00000075541 ENSMUST00000100430 3 1 1 64 15 79721288 79721306 GTACAAGGGTCATAGTGTG 57 79721242 79721260 GATAGGGAAATGGATCCGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 0610040B10Rik ENSMUSG00000075575 ENSMUST00000087782 1 1 1 60 5 144091186 144091205 GCCTTGATTTGATTCTTGTG 57 144091228 144091246 ATCAGAATTACACTCAGCG 57 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-302b ENSMUSG00000076252 ENSMUST00000102297 1 1 1 60 3 127248148 127248167 TCCCTTCAACTTTAACATGG 57 127248190 127248208 AACATGGAAGCACTTACTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV6-25 ENSMUSG00000076582 ENSMUST00000103383 3 1 1 63 6 70165440 70165459 TTCAGGCATTTGTATTCGTG 58 70165663 70165681 TGGGTCATCACAATGTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV5-20 ENSMUSG00000076661 ENSMUST00000103470 3 1 1 60 12 115307230 115307248 CAGTGATCATTGGATGGAC 57 115307188 115307206 TGCTAACCATTCTAGCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S12 ENSMUSG00000076743 ENSMUST00000103552 2 1 1 60 12 117238424 117238444 CAAGCTACGATATAAACTGGG 58 117238384 117238402 CATCCAATCCACTCAAGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV15D-2 ENSMUSG00000076813 ENSMUST00000103624 1 1 1 92 14 53887680 53887919 TTCTCTGGATGCAATGTGG 59 53887975 53887993 ATATGAACAGTCCAGGGTG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRAV12-2 ENSMUSG00000076844 ENSMUST00000103656 2 1 1 197 14 54236386 54236406 GAGTACTTACTCACCTTTCCT 58 54236565 54236583 AAAGCACAGTAGTACAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRDV2-2 ENSMUSG00000076866 ENSMUST00000103678 2 1 1 108 14 54580703 54580983 TTCCACTTCTCTTGAAGCC 59 54581055 54581073 ACTTGTGTCATAGGTGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2A7A2_MOUSE ENSMUSG00000078495 ENSMUST00000105719 1 1 1 99 4 147131932 147135342 AAATACACCACAGGGTCTG 59 147131851 147131870 CATGTACAGTGTCCTCTGAG 59 NA Nonspecific Mus musculus 50 Ifrg15 ENSMUSG00000079252 ENSMUST00000111754,ENSMUST00000065648,ENSMUST00000097526 3 3 3 60 1 157899114 157899132 ACCAAGTGTTCTTAGACCG 59 157899156 157899174 TTGTCAGGGTAACACTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Q0WXH7_MOUSE ENSMUSG00000079505 ENSMUST00000113886 1 1 1 101 17 35517117 35517322 CTGAATAGTGTGAGAGCCG 59 35517034 35517052 GAAACACAGAAAGCCAAGG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Hoxa3 ENSMUSG00000079560 ENSMUST00000114434,ENSMUST00000048882 1 2 2 121 6 52122763 52133720 AAACATCTTTGGAGGTTTGC 59 52122661 52122679 CGATCGTGATCACACTCTC 59 NA InUTR Mus musculus 50 4933413N12Rik ENSMUSG00000079580 ENSMUST00000114683 1 1 1 161 17 29682492 29682510 TGCTGGTAATTTGAGACAG 57 29663624 29663642 TAGCCATGATGGAGAAGAC 58 NA DesignNoJunction, InUTR Mus musculus 50 Ins2 ENSMUSG00000000215 ENSMUST00000105934,ENSMUST00000105932,ENSMUST00000000220 1 3 4 294 7 149865431 149865450 TATTGTTTCAACATGGCCCT 59 149864668 149864686 ACTGATCTACAATGCCACG 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Glra1 ENSMUSG00000000263 ENSMUST00000075603,ENSMUST00000102716 2 2 3 98 11 55379768 55387792 ACTTTAAAGGTCCTCCTGTG 59 55349985 55350006 GGAAGATGTTGACCCTATAGTC 59 NA Mus musculus 50 Tom1l2 ENSMUSG00000000538 ENSMUST00000102683,ENSMUST00000093048,ENSMUST00000093046 1 3 8 129 11 60046449 60055327 CAGAAATGATTCCCGTTGC 59 60043719 60043740 CTTTCTTCCAGGAACTTATCGA 59 NA Mus musculus 50 Tnk1 ENSMUSG00000001583 ENSMUST00000001626,ENSMUST00000108631,ENSMUST00000102583,ENSMUST00000094063,ENSMUST00000108628,ENSMUST00000108626 2 6 6 80 11 69669466 69669484 GTCATGATGAAGCTAGAGC 57 69669297 69669423 TTCCATCACCATCTGTAGAG 58 NA Mus musculus 50 Stk38l ENSMUSG00000001630 ENSMUST00000001675,ENSMUST00000111644 3 2 2 176 6 146717630 146717648 GAATTCAAAGCGGAAAGCA 59 146720213 146720629 GGTGGAAAGCCTATTAGCA 59 NA Mus musculus 50 Nfix ENSMUSG00000001911 ENSMUST00000109764,ENSMUST00000098572,ENSMUST00000063596 2 3 6 82 8 87240091 87240109 CTTCCTATGCCTGATTCCA 58 87237744 87240045 GTCGTTGTGAATGAAGGTG 59 NA Mus musculus 50 Cd97 ENSMUSG00000002885 ENSMUST00000109802 2 1 3 81 8 86257360 86257380 TAACCTGGGATATAAGCTCCT 59 86254143 86257318 GCACTCATTCACATCTTGAC 59 NA Mus musculus 50 Bicd1 ENSMUSG00000003452 ENSMUST00000086829,ENSMUST00000111517,ENSMUST00000111513,ENSMUST00000003544 2 4 4 80 6 149432707 149443089 GAACTGAAAGAGAACAACGA 58 149443130 149443150 CTCCCGGAATTTATATTCTCG 58 NA Mus musculus 50 Klc4 ENSMUSG00000003546 ENSMUST00000003641 2 1 2 95 17 46767688 46773949 CAACAATCTGGCTCTTCTG 58 46767611 46767629 TATGTGGACCTGTAGTGAG 57 NA Mus musculus 50 Insig2 ENSMUSG00000003721 ENSMUST00000003818,ENSMUST00000071064 1 2 2 90 1 123203503 123203521 CTCTATGTCCGTTCTTGGT 58 123202515 123203449 TGCATTCATACATTGCCAG 58 NA Mus musculus 50 Cd44 ENSMUSG00000005087 ENSMUST00000111195 2 1 15 80 2 102693217 102693235 CCTACTGAACAGCCTACTG 59 102679612 102693174 TGCTTCTGCTGTAATACTGG 59 NA Mus musculus 50 Prkaca ENSMUSG00000005469 ENSMUST00000005606,ENSMUST00000059266 3 2 2 84 8 86518847 86519198 TATCAGAGAAAGGTGGAAGC 59 86519245 86519263 CTTCCTCCTCATAGTCGTC 58 NA Mus musculus 50 Neurl ENSMUSG00000006435 ENSMUST00000111808 2 1 2 262 19 47254032 47314300 AACCTCAAAGACTCCATCG 59 47314526 47314850 TTCTTGGTGATCTTCAGCC 59 NA DesignRelaxed Mus musculus 50 Kcnq1 ENSMUSG00000009545 ENSMUST00000105918 2 1 2 102 7 150334710 150335418 AGGCTTCCTCATTGTTCTG 59 150335482 150368643 GACAATCTCCATCCAGAAGAG 59 NA Mus musculus 50 Dhdds ENSMUSG00000012117 ENSMUST00000012262,ENSMUST00000105887,ENSMUST00000105889,ENSMUST00000105885 3 4 5 93 4 133548488 133550087 ATGGAAGAACAGGAGAAGC 59 133548413 133548431 CAATCTTCTCCTGGAGGTC 59 NA Mus musculus 50 Trnt1 ENSMUSG00000013736 ENSMUST00000113247,ENSMUST00000101098 2 2 5 81 6 106726168 106726187 AAAGGTTCGATTTGTTGGAC 58 106726230 106726457 AATACCTGGCCTGAAATACC 59 NA Mus musculus 50 Rnf170 ENSMUSG00000013878 ENSMUST00000110580,ENSMUST00000014022,ENSMUST00000110577,ENSMUST00000110575 3 4 5 80 8 27234451 27236386 ACTTCTCAGAAATGTACAGC 57 27236428 27236447 TCTGTTTGGAATTGTTCTCG 58 NA Nonspecific Mus musculus 50 Hps5 ENSMUSG00000014418 ENSMUST00000051883 2 1 5 124 7 54030213 54030231 ATTTCGTTCTCCATCTCCC 59 54028535 54028581 TCATGTGCTCTTTCAGCTC 59 NA Mus musculus 50 Oc90 ENSMUSG00000015001 ENSMUST00000110101 3 1 4 134 15 65719190 65720986 AACACTGTTGCCTAGAGTG 59 65714185 65715386 ATAATCTCTGCAGATCCTGG 58 NA Mus musculus 50 Cmah ENSMUSG00000016756 ENSMUST00000110390 3 1 3 112 13 24527546 24530998 TGGAGTACAAAGAGGAATGG 59 24531073 24531091 AAACGGACAGTAGATTCGG 59 NA Mus musculus 50 Pigt ENSMUSG00000017721 ENSMUST00000103101,ENSMUST00000017865 1 2 2 81 2 164326007 164326587 CCTATCTGCAGAAATGCTC 57 164326632 164326650 TGATGAAGGCATCAAAGAC 57 NA Mus musculus 50 4632419I22Rik ENSMUSG00000018068 ENSMUST00000108039,ENSMUST00000018212 1 2 2 80 11 86064578 86065773 TATCTTACAAGCAGAGCTCC 58 86064517 86064535 CAGGCTCCATTTCTAACAC 58 NA Mus musculus 50 Tomm34 ENSMUSG00000018322 ENSMUST00000109384,ENSMUST00000018466 3 2 2 81 2 163890672 163890692 GTTGACTATAAGACTGTGCTG 58 163886728 163890630 TGAGAGCTCTGGTTATTCTG 58 NA Mus musculus 50 Kif3a ENSMUSG00000018395 ENSMUST00000057330,ENSMUST00000108954,ENSMUST00000108958 2 3 3 85 11 53392610 53392629 TTCGAGTGTCATACTTGGAG 59 53392674 53393238 TTCTTTAACCTCTAACCTCTGG 59 NA InUTR Mus musculus 50 Acadvl ENSMUSG00000018574 ENSMUST00000018718 2 1 2 80 11 69828670 69828688 TACTACTGTGCTTCAGGGA 59 69828195 69828626 GACTTCGATTCCTGAGTGG 59 NA Mus musculus 50 Slc25a22 ENSMUSG00000019082 ENSMUST00000019226,ENSMUST00000106007 2 2 3 97 7 148617545 148617645 CTACTCAGGGATGTTCCCT 59 148617466 148617484 TAGAAAGGCGACTTCTCCT 59 NA Mus musculus 50 Slc6a8 ENSMUSG00000019558 ENSMUST00000114465 3 1 4 86 X 70925323 70925341 TTTCCAAAGGGAGATCTCC 58 70925391 70925484 ACGTACATTCCACCATCAG 59 NA Mus musculus 50 Lyst ENSMUSG00000019726 ENSMUST00000050664 1 1 2 80 13 13741132 13741152 TGGAATACATCCGAATCCG 59 13741196 13741214 GTCTTCCAGAACTGATGGT 58 NA Mus musculus 50 Tcfe2a ENSMUSG00000020167 ENSMUST00000105344,ENSMUST00000105343,ENSMUST00000105342,ENSMUST00000105346,ENSMUST00000105345,ENSMUST00000020377,ENSMUST00000105341,ENSMUST00000020379,ENSMUST00000105340,ENSMUST00000105339 1 10 10 80 10 79876078 79877920 CGACTCCTATAGTGGACTC 57 79876016 79876034 TCCTCATCCTCTTTCTCCT 58 NA Mus musculus 50 Xpo1 ENSMUSG00000020290 ENSMUST00000020538,ENSMUST00000109551,ENSMUST00000102870,ENSMUST00000102869 2 4 5 88 11 23185141 23185159 AGTTGGAGAAGTAATGCCG 59 23185211 23185810 ATGTATGAACCTGCTGAGG 59 NA Mus musculus 50 Ltc4s ENSMUSG00000020377 ENSMUST00000101265,ENSMUST00000102772 1 2 2 194 11 50050913 50050931 CTACAGGTGATCTCTGCAC 59 50050566 50050584 GAACAGGTAGAACAGTCCG 59 NA DesignNoJunction Mus musculus 50 Ogdh ENSMUSG00000020456 ENSMUST00000079291 3 1 7 167 11 6216790 6250735 AACTTGATCCTCTCGAAGC 59 6254985 6255005 GAGAAGTCTCTTGACTTTGTG 58 NA Mus musculus 50 Ccdc46 ENSMUSG00000020728 ENSMUST00000061287,ENSMUST00000106724 1 2 8 80 11 108301841 108301859 TAAGTGACTCATGGCAGTG 59 108301903 108331616 TGTACTGTTCTCTGTGAGC 58 NA Mus musculus 50 Sec14l1 ENSMUSG00000020823 ENSMUST00000021177,ENSMUST00000103026 2 2 3 81 11 117014522 117014540 ATGAAGACCTGAAGCTCTG 58 117014582 117016544 TGAATGAGAATCTCATGTGGAG 59 NA Mus musculus 50 Acly ENSMUSG00000020917 ENSMUST00000107389,ENSMUST00000007131,ENSMUST00000107385 2 3 5 84 11 100380474 100380938 ACAAGAAAGAAGTCCTGGC 59 100380408 100380426 GGGTTGATCTCAAGGTAGG 59 NA Mus musculus 50 Clmn ENSMUSG00000021097 ENSMUST00000109937,ENSMUST00000109936,ENSMUST00000077761 1 3 3 82 12 106023787 106028200 AACCAGGAAGTATGGTGTG 59 106023723 106023741 TAGCTTTGATGACAGCCAG 59 NA Nonspecific Mus musculus 50 Pcnx ENSMUSG00000021140 ENSMUST00000095564 1 1 3 109 12 83034520 83034538 TTCAAGATGGTCAGCAAGG 59 83034610 83051141 GAGATCTATCAGCAAGGAGG 59 NA Mus musculus 50 9030617O03Rik ENSMUSG00000021185 ENSMUST00000110073,ENSMUST00000110070,ENSMUST00000110069,ENSMUST00000069782,ENSMUST00000110068 3 5 5 80 12 102091455 102091474 TTACCAAGGAAGATCCATGG 59 102091515 102095142 AGATGGTCAAATCTAGGAGAC 58 NA Mus musculus 50 Rgs6 ENSMUSG00000021219 ENSMUST00000021642 3 1 2 82 12 84217219 84217239 CTCACAGCTATGAGATAACCA 59 84217283 84234656 CTTGTAGATGTGCTCCTGG 59 NA Mus musculus 50 2810452K22Rik ENSMUSG00000021276 ENSMUST00000043716,ENSMUST00000021705,ENSMUST00000021704 3 3 3 88 12 112122159 112122177 AATCCTGAAATGGGACAGC 59 112118014 112122108 TCTCTTTACTCAGCAAGCTG 59 NA Mus musculus 50 Mctp1 ENSMUSG00000021596 ENSMUST00000109583,ENSMUST00000046098 1 2 5 80 13 76871061 76896256 ATCCAGTAAGTTTCAGACCC 59 76896299 76896317 ATGCTGACTATTCCTCTCC 58 NA Mus musculus 50 Slmap ENSMUSG00000021870 ENSMUST00000102956,ENSMUST00000112331,ENSMUST00000038522,ENSMUST00000100798 2 4 7 92 14 27279541 27279559 CTTCACCAATGAAAGGCTG 59 27278937 27279398 ACTTGTATCCCTAAGCTGC 59 NA Mus musculus 50 Mbnl2 ENSMUSG00000022139 ENSMUST00000088418,ENSMUST00000088419,ENSMUST00000022738 3 3 3 105 14 120784801 120788128 TGATAAACTGGAGGTATGCA 58 120788196 120788214 GTTTGTGTCGATCATGGTG 59 NA Mus musculus 50 6030458C11Rik ENSMUSG00000022195 ENSMUST00000057256 3 1 2 92 15 12753380 12753398 TTACATTTGGACTCCCACC 59 12751299 12753325 ACTCAGTTCTCCAAAGAGTG 59 NA Mus musculus 50 Sh3bp1 ENSMUSG00000022436 ENSMUST00000001226,ENSMUST00000109698,ENSMUST00000061239,ENSMUST00000109695 2 4 4 86 15 78738415 78738433 CTCTGTGTCCTCCATTCAG 59 78738481 78738795 TTGAAGTTGATATCTCCAGGG 59 NA Mus musculus 50 Rpl24 ENSMUSG00000022601 ENSMUST00000114450,ENSMUST00000023269 3 2 2 96 16 55967200 55967218 GAGTCAGCATTCCTTTCCA 59 55967277 55969635 TTTGAATTTCTTCCGACTGC 59 NA Nonspecific Mus musculus 50 Stxbp5l ENSMUSG00000022829 ENSMUST00000114782,ENSMUST00000114780,ENSMUST00000114790,ENSMUST00000023526,ENSMUST00000114778 2 5 10 81 16 37188700 37188720 ATAGATCAAGTGACCTGTACC 58 37174433 37188657 TTCAGCTCTGTTAAGCCTG 59 NA Mus musculus 50 2310037I24Rik ENSMUSG00000022992 ENSMUST00000023727,ENSMUST00000116400 3 2 2 80 15 98350849 98354901 GAGTTCAGTGATGACTTGGA 59 98350788 98350808 AGTTAGCGAAGGATCAAAGAG 59 NA Nonspecific Mus musculus 50 Sfi1 ENSMUSG00000023764 ENSMUST00000072704 1 1 7 119 11 3077486 3079407 CACTACAGAACTGGAAGAC 57 3070663 3070681 ATATCAACCAGGACTTCCA 57 NA Mus musculus 50 Pde10a ENSMUSG00000023868 ENSMUST00000115715,ENSMUST00000115724,ENSMUST00000089085,ENSMUST00000115720,ENSMUST00000024647,ENSMUST00000115718 1 6 7 101 17 9091797 9091815 AGTGTTAGTGCAGAGACTG 58 9113394 9121971 ATTCGTATCCTGGTACCTG 58 NA Mus musculus 50 Pla2g7 ENSMUSG00000023913 ENSMUST00000024706 3 1 2 93 17 43744346 43748227 TACAATCAAGGGCTCAGTG 59 43748282 43748302 GATTTCTCCTTTCAGTGTCAG 58 NA Mus musculus 50 Col11a2 ENSMUSG00000024330 ENSMUST00000076926,ENSMUST00000114258,ENSMUST00000114257,ENSMUST00000114255,ENSMUST00000114252,ENSMUST00000087497,ENSMUST00000114250 2 7 7 92 17 34180327 34181767 GATGAAGTCTTTGAAGGCG 58 34181823 34181841 ACATTCCAGATCCTTCTGC 59 NA Mus musculus 50 Ppp2r2b ENSMUSG00000024500 ENSMUST00000069341,ENSMUST00000025377,ENSMUST00000091918 1 3 3 80 18 42822815 42822833 GACCAGAGACTATCTGACC 58 42808409 42822773 TAGTCATGAACCTGGTATGTC 58 NA Mus musculus 50 Pde6c ENSMUSG00000024992 ENSMUST00000025956 3 1 2 116 19 38252605 38252623 AAATACGTAACCTCCGACC 59 38252805 38254507 CAGAAGTGCTACCTGACTC 59 NA Mus musculus 50 Ablim1 ENSMUSG00000025085 ENSMUST00000111558,ENSMUST00000036802,ENSMUST00000111544 2 3 15 109 19 57121556 57123965 CTACAAACAGCATGATGCAG 59 57121466 57121484 GTATCTCGTTGGGATCTGG 59 NA Mus musculus 50 Cbr2 ENSMUSG00000025150 ENSMUST00000026148 3 1 2 81 11 120592112 120592131 ACTTACTGGTGAACAATGCA 59 120591966 120592068 CTGAAGGACCTGTCAAAGG 59 NA Mus musculus 50 Baiap2 ENSMUSG00000025372 ENSMUST00000106233,ENSMUST00000106231,ENSMUST00000026436,ENSMUST00000106234,ENSMUST00000075180 1 5 6 97 11 119858321 119858339 AGTCTCAAAGCAAGCTGAG 59 119858400 119858816 TGTCTTGTTCTCAGTGGTG 59 NA Mus musculus 50 Arhgef9 ENSMUSG00000025656 ENSMUST00000113876,ENSMUST00000113885,ENSMUST00000113883,ENSMUST00000113882,ENSMUST00000113878,ENSMUST00000113881,ENSMUST00000113880,ENSMUST00000113873 1 8 10 117 X 92247484 92250291 AAACAGAAAGGTGTCAACTC 58 92247386 92247404 CAAACACTTGAGACTGAGC 58 NA Nonspecific Mus musculus 50 Hspa4l ENSMUSG00000025757 ENSMUST00000077083,ENSMUST00000108086 2 2 2 82 3 40588269 40588555 CTCCAGAAGACATGAATAAGCT 59 40588598 40588616 TTTAGGCTGGTCTTCTCCT 59 NA Mus musculus 50 Sec61a2 ENSMUSG00000025816 ENSMUST00000102981,ENSMUST00000026925 2 2 4 81 2 5793060 5794799 GAGCTGAACAGGTACATCC 59 5792997 5793017 CAAGGAAGTCTGCTAGTACTG 59 NA Mus musculus 50 Eif4e2 ENSMUSG00000026254 ENSMUST00000113233,ENSMUST00000113232,ENSMUST00000027471,ENSMUST00000076362,ENSMUST00000113236,ENSMUST00000113231 2 6 6 61 1 89120984 89121002 CCACAGTGACTTTCATCTC 57 89121027 89122437 TATTTGCATCATCCTCCCA 58 NA Nonspecific, DesignRelaxed Mus musculus 50 2310035C23Rik ENSMUSG00000026319 ENSMUST00000086721 2 1 2 80 1 107583533 107583551 GTTTGAACTACGGAAAGCC 59 107583594 107583722 AAAGGAACTTCATGTTCTGC 58 NA Mus musculus 50 Nfasc ENSMUSG00000026442 ENSMUST00000043189 3 1 2 92 1 134498612 134498630 CTATGAGATCCGAGTCCAG 58 134496782 134498556 GCCCTGGGATAATCTTCTC 59 NA Mus musculus 50 Slc25a25 ENSMUSG00000026819 ENSMUST00000113310,ENSMUST00000113305,ENSMUST00000113307,ENSMUST00000113308 1 4 6 115 2 32275932 32276839 GAGAAGATTCTTAAGAGCATGG 58 32275838 32275856 CAGTACAGGATGATCTCCG 58 NA Mus musculus 50 Nr4a2 ENSMUSG00000026826 ENSMUST00000112629,ENSMUST00000112627,ENSMUST00000067024,ENSMUST00000028166 1 4 4 80 2 56961670 56962536 GACTATTCCAGGTTCCAGG 59 56961608 56961626 GAGATCGTAGAACTGCTGG 59 NA Mus musculus 50 5730472N09Rik ENSMUSG00000026858 ENSMUST00000077977,ENSMUST00000100214,ENSMUST00000116543 3 3 4 80 2 30225863 30225881 CTCTTAGTGGCATCTCCTC 58 30225925 30226650 AATTGACCACTACCATCGA 58 NA InUTR Mus musculus 50 Gsn ENSMUSG00000026879 ENSMUST00000113016,ENSMUST00000028239 2 2 2 83 2 35159836 35159856 GCTTAAGGACAAGAAGATGGA 59 35159901 35160111 ACCTCTTCGATCACAAAGC 59 NA Mus musculus 50 Dab2ip ENSMUSG00000026883 ENSMUST00000112981 2 1 13 91 2 35563799 35563817 CAAATTCCTCACACCAGGA 59 35563871 35564347 GATGATGTTGTCACCTTCAC 58 NA Mus musculus 50 Lhx6 ENSMUSG00000026890 ENSMUST00000112960,ENSMUST00000112963,ENSMUST00000112961,ENSMUST00000072054 3 4 7 81 2 35946536 35946554 GACGACATCCACTACTCTC 58 35942983 35946493 GTACCTGACTCTCAATGTAGC 59 NA DesignRelaxed Mus musculus 50 4930525F21Rik ENSMUSG00000027209 ENSMUST00000110446,ENSMUST00000110448,ENSMUST00000110444,ENSMUST00000028638 2 4 4 84 2 125833026 125833044 CTAAAGAACCCAAGAGCGT 59 125829717 125832978 TATAGTGGGAAGGCTTGGT 59 NA Mus musculus 50 Nsfl1c ENSMUSG00000027455 ENSMUST00000103160 1 1 3 80 2 151328908 151331100 AACCGAGAGTTCATGTAGTG 59 151331142 151331161 GGTCTTGGTAGCTTCTAAGG 59 NA Mus musculus 50 Trim2 ENSMUSG00000027993 ENSMUST00000107692,ENSMUST00000107691,ENSMUST00000107695,ENSMUST00000107693,ENSMUST00000107694,ENSMUST00000065380,ENSMUST00000054990 2 7 7 102 3 83994504 83994522 CAGAAGGCTGTGAAGAGAC 59 83982086 83994438 TTCTTCCTTTGGTACCGAC 59 NA Mus musculus 50 Aqp7 ENSMUSG00000028427 ENSMUST00000116345,ENSMUST00000054945,ENSMUST00000030136 1 3 3 82 4 40981489 40981801 CAAACAAGTGTTCAGAGCC 59 40981425 40981443 CAATACCACCTAGGTAGGC 58 NA Mus musculus 50 Clta ENSMUSG00000028478 ENSMUST00000107845,ENSMUST00000107846,ENSMUST00000107851,ENSMUST00000107849,ENSMUST00000107847,ENSMUST00000078664 2 6 6 85 4 44031710 44032751 TGAATACTACCAGGAGAGC 57 44032800 44032818 TACTTTCAGGCTCTGACTG 58 NA Mus musculus 50 Tm2d1 ENSMUSG00000028563 ENSMUST00000030292,ENSMUST00000102793 2 2 3 233 4 98047312 98047331 TTGTACAAACTACACAGCTC 57 98032318 98037191 TTTAACAAGCCTAAGGCAG 57 NA DesignRelaxed Mus musculus 50 1700012P22Rik ENSMUSG00000028589 ENSMUST00000030323 2 1 1 72 4 144009611 144009629 GGAATGGACAGAAACTGCT 59 144008470 144008488 CCATAGTTTGTGGGAGGTG 59 NA DesignNoJunction Mus musculus 50 Echdc2 ENSMUSG00000028601 ENSMUST00000052999,ENSMUST00000116309,ENSMUST00000106695,ENSMUST00000106694,ENSMUST00000106693,ENSMUST00000116308,ENSMUST00000106692,ENSMUST00000030338,ENSMUST00000116307 2 9 10 143 4 107842374 107842470 TGTTTGTTAGTGAGCTGCT 59 107844717 107844735 CCTCCACATCACTCATCTG 59 NA Mus musculus 50 Cpt2 ENSMUSG00000028607 ENSMUST00000030345,ENSMUST00000106720,ENSMUST00000106719 1 3 4 85 4 107586923 107586944 CTATCCCTAAACTTGAAGACAC 58 107585343 107586877 TTCTGTCTTCCTGAACTGG 58 NA Mus musculus 50 Fusip1 ENSMUSG00000028676 ENSMUST00000102544 2 1 4 87 4 135419110 135419452 CCTAGAAATAGACCGACTGG 58 135423051 135423069 TGTACTGGGTATTCCAGCT 59 NA Mus musculus 50 Srrm1 ENSMUSG00000028809 ENSMUST00000105861,ENSMUST00000105862,ENSMUST00000030613,ENSMUST00000097847 1 4 5 88 4 134896822 134896840 GATCCAAATCTCGGTCTCG 59 134896528 134896772 AGAGTATGATCTTGATCGGGA 59 NA Mus musculus 50 Epb4.1 ENSMUSG00000028906 ENSMUST00000097859 3 1 14 83 4 131513611 131513629 GACAAGCGCTTATCTACAC 58 131493368 131513565 GCCATTTACACTTCCATCTC 58 NA Mus musculus 50 St7 ENSMUSG00000029534 ENSMUST00000115419,ENSMUST00000081635,ENSMUST00000077080,ENSMUST00000053148 3 4 7 118 6 17796282 17796301 GTGATTCAGATCATCTTCGC 58 17798068 17800366 GGACCTAATTTCGTTTATCTCC 58 NA Mus musculus 50 Rbm19 ENSMUSG00000029594 ENSMUST00000031590 1 1 2 88 5 120581249 120582150 TGTTTGACCATGAGACCAG 59 120582202 120582220 AATAAGGAAGCTTCGGACC 59 NA Mus musculus 50 Abtb1 ENSMUSG00000030083 ENSMUST00000032169 3 1 2 110 6 88788921 88788939 TGTAGAACACGTGAGTGAC 59 88788741 88788847 TTGGAAGCCACAAATTCAG 58 NA Mus musculus 50 Ptpro ENSMUSG00000030223 ENSMUST00000095376 3 1 2 165 6 137401301 137403107 CTTAAGAGAAGGCAGAAGTG 57 137403235 137410185 AATGTACTGCTCCTCTGTC 58 NA Mus musculus 50 Tacc2 ENSMUSG00000030852 ENSMUST00000084513,ENSMUST00000033140,ENSMUST00000059145,ENSMUST00000033141 3 4 5 80 7 137873328 137875049 GACTCCACTAAAGACGATGG 59 137877031 137877049 TTTGGAGACTTCTTCACCC 59 NA Mus musculus 50 Smarca1 ENSMUSG00000031099 ENSMUST00000101616,ENSMUST00000077569,ENSMUST00000088973 3 3 6 82 X 45211482 45211501 GATTATTGTATGTGGCGTGG 59 45207882 45211437 GCATCTATCGCTTCCTCTC 59 NA Mus musculus 50 Pak3 ENSMUSG00000031284 ENSMUST00000070348,ENSMUST00000112868,ENSMUST00000112865,ENSMUST00000112864 3 4 6 96 X 140144283 140149690 GAATTCACTGGAATTCCTGAG 58 140149748 140149766 CATCAAGAACAGCTTGTGG 59 NA Mus musculus 50 Ctps2 ENSMUSG00000031360 ENSMUST00000112303,ENSMUST00000033727,ENSMUST00000112301,ENSMUST00000112300 2 4 7 81 X 159413146 159413164 ATTTGGGAGGAACAATGAG 57 159413208 159434652 TCACCATAAAGCTTCTTCAG 57 NA Mus musculus 50 Ash2l ENSMUSG00000031575 ENSMUST00000068892,ENSMUST00000110610,ENSMUST00000110609 2 3 3 94 8 26929022 26929041 ATCTCACTGTACAAGAGCTG 59 26927970 26928083 ATGTCACTCATAGGGTGGT 59 NA Mus musculus 50 BC019943 ENSMUSG00000031577 ENSMUST00000033982,ENSMUST00000098842 1 2 2 86 8 32266323 32266344 GAACCAGAAGATGAAACTAGGT 59 32266391 32269080 AACTCTGCAGGGAATTCTG 59 NA Mus musculus 50 Slc10a7 ENSMUSG00000031684 ENSMUST00000034111,ENSMUST00000109899,ENSMUST00000093415,ENSMUST00000093416 2 4 4 124 8 81049165 81049183 AGTCACATCCATCAACGAG 59 81055055 81102633 TAAATATCGCAGCTGCCTC 59 NA InUTR Mus musculus 50 Smarca4 ENSMUSG00000032187 ENSMUST00000098948,ENSMUST00000034707 2 2 3 81 9 21504510 21504528 CTCAATGACCTGGAGAAGG 59 21504573 21505307 CCTCATAGATCAGGGAACC 58 NA Mus musculus 50 Nmnat3 ENSMUSG00000032456 ENSMUST00000112935,ENSMUST00000035031,ENSMUST00000112938 3 3 4 66 9 98254571 98299880 CTACACCAAACAGGAAGGT 59 98299910 98299928 TCCCATAGCTGTCATTGAC 59 NA DesignRelaxed Mus musculus 50 Mtap4 ENSMUSG00000032479 ENSMUST00000072772 3 1 3 150 9 109971355 109971373 ACTTCCACTAAGCCTAGCT 59 109971487 109975132 TGGATACTATCTGGACCCG 59 NA Mus musculus 50 Kif9 ENSMUSG00000032489 ENSMUST00000061155,ENSMUST00000084948,ENSMUST00000084952,ENSMUST00000111923 2 4 5 82 9 110420216 110421549 GAAGCAAGGAGAGTACGAG 59 110421595 110421613 TCAGGTCTTTGAGCTTCAG 59 NA Mus musculus 50 Gpbp1 ENSMUSG00000032745 ENSMUST00000047627,ENSMUST00000091236,ENSMUST00000116379,ENSMUST00000109274 2 4 4 81 13 112228324 112229322 CAGTGAAAGAGTGTAATCGT 57 112228262 112228281 CGTGTCAGTTTAGTTAAACG 57 NA Mus musculus 50 Gas7 ENSMUSG00000033066 ENSMUST00000108681,ENSMUST00000041611,ENSMUST00000108682,ENSMUST00000108680 1 4 4 113 11 67416708 67416727 CTATGTCAACACGACTACCA 59 67443182 67456792 TATCCATTCACTGTTGTAGGC 59 NA Mus musculus 50 Aspm ENSMUSG00000033952 ENSMUST00000053364 1 1 2 83 1 141373471 141373933 CTCATTCAGGCTTATTGGAG 58 141373978 141373997 CCTAGACTGAAGGATGACTG 58 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111696,ENSMUST00000111695,ENSMUST00000111694,ENSMUST00000111678,ENSMUST00000111677,ENSMUST00000111676,ENSMUST00000111687,ENSMUST00000111685,ENSMUST00000111684,ENSMUST00000111672 2 10 23 71 2 84443385 84443403 AAGAGTTGGATGTGTTGGT 59 84443048 84443350 GCTAAATCTTCTGCATGGG 58 NA DesignRelaxed Mus musculus 50 Igsf9b ENSMUSG00000034275 ENSMUST00000115247,ENSMUST00000098919 3 2 3 81 9 27125082 27125403 AAAGTATCAGGTGAGTGACG 59 27125446 27125465 ATATGCTCGACACGTATAGG 58 NA Mus musculus 50 Tpbg ENSMUSG00000035274 ENSMUST00000006559,ENSMUST00000098500 1 2 2 60 9 85738753 85738772 GTGGATGCATAACATCAGAG 58 85738792 85738813 GTATCTGTAATGATACCCTTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Wdr38 ENSMUSG00000035295 ENSMUST00000039535,ENSMUST00000112872 1 2 2 83 2 38856427 38856448 CATACCATTTGGGTGAATAGTC 58 38856492 38856690 GACTTTGACCGTACGAGAG 59 NA Mus musculus 50 Dgkb ENSMUSG00000036095 ENSMUST00000072865,ENSMUST00000040500 2 2 3 80 12 39329352 39329370 AATGGGCCAAATTTACACG 58 39329413 39330698 TTGCTTGTTCTGATAACCAC 58 NA Mus musculus 50 Dnajc12 ENSMUSG00000036764 ENSMUST00000043317 1 1 1 66 10 62858591 62858609 ATCCTGAGAACTCCAAAGC 59 62860014 62860032 TTGCACAGAATCTCCTTCG 59 NA DesignNoJunction Mus musculus 50 Mrpl55 ENSMUSG00000036860 ENSMUST00000108786,ENSMUST00000108787,ENSMUST00000045697,ENSMUST00000108785,ENSMUST00000108784,ENSMUST00000116374 2 6 6 132 11 59018218 59018237 ACTATCCATATCCGATACCG 57 59019223 59019241 CTTCTTCCCTCTTCTGCTG 59 NA DesignNoJunction Mus musculus 50 Gtdc1 ENSMUSG00000036890 ENSMUST00000112813 1 1 5 82 2 44680926 44680944 AAGAAATGGCACTGGAGAG 59 44490828 44680880 GGCATGAATCTGTAGTGCT 59 NA Mus musculus 50 Wdr62 ENSMUSG00000037020 ENSMUST00000108190,ENSMUST00000047189 3 2 3 93 7 31030372 31030390 CTTTACACCCATGAAGCCT 59 31029549 31030316 GAGTGAACACTCACTTAGCA 59 NA Mus musculus 50 Slc9a7 ENSMUSG00000037341 ENSMUST00000072451 2 1 2 80 X 19735991 19736011 CTCATTGTCTTCTTCACTGTG 58 19716089 19735952 CACACCAACTCTTATATTGAGC 59 NA Mus musculus 50 Spon1 ENSMUSG00000038156 ENSMUST00000046687,ENSMUST00000084696 2 2 2 80 7 120931995 120932013 GGTTTCACGTTAATTGCCC 59 120932056 120980345 ATCTATGATCTGGAAGGTGC 58 NA Mus musculus 50 Rbbp7 ENSMUSG00000038344 ENSMUST00000041370,ENSMUST00000112316,ENSMUST00000112314,ENSMUST00000112315 2 4 4 205 X 159235738 159245432 GAAATATGCTGATCTCCTGGA 59 159228720 159228738 CCTGCTGCATATTCTCCTC 59 NA DesignRelaxed Mus musculus 50 BC057079 ENSMUSG00000038368 ENSMUST00000097992,ENSMUST00000084432,ENSMUST00000107148 3 3 4 80 4 88006485 88014590 TAACTGAGGTTATCAGTGTCTC 58 88014630 88014649 TAGACAGATGAAGATGTCCC 58 NA Mus musculus 50 Nfe2l1 ENSMUSG00000038615 ENSMUST00000107656 1 1 7 80 11 96680957 96681386 TTTGACTCTGAGCACAGAG 59 96680895 96680914 GAATTCTTCTACAGGCAGGT 59 NA Mus musculus 50 Muted ENSMUSG00000038982 ENSMUST00000068627,ENSMUST00000035899,ENSMUST00000110198 2 3 3 87 13 38711014 38711032 GGAAACAAATGAGTGCCTG 59 38704557 38710963 GTTAGCTGCTTGCAATCTC 59 NA Mus musculus 50 Cdc123 ENSMUSG00000039128 ENSMUST00000043864,ENSMUST00000100445,ENSMUST00000114971 2 3 3 80 2 5742366 5742386 ACTCTCAGTGATATCTTCCTG 58 5731875 5742324 AGTGCAATGAATAAACGGC 59 NA Mus musculus 50 Gpatch2 ENSMUSG00000039210 ENSMUST00000065573,ENSMUST00000110943,ENSMUST00000097443,ENSMUST00000044812,ENSMUST00000110941 1 5 5 151 1 189050018 189050036 GAGTGAAGAAAGAAGCCAG 58 189054715 189057018 CATCATCACCTTGTCTTCC 57 NA Mus musculus 50 Suv39h1 ENSMUSG00000039231 ENSMUST00000115637,ENSMUST00000089440 3 2 4 169 X 7649584 7651249 GACTCTAGGTTGCAGTGTG 59 7648361 7649451 GGTAATACTCCTGCTCACG 59 NA Mus musculus 50 9130011E15Rik ENSMUSG00000039901 ENSMUST00000045131 2 1 2 80 19 46049592 46049717 CTCATGAAGGTGAATTTGGAG 58 46049532 46049552 GTTGTCCTTGATCTTCATCAG 58 NA Mus musculus 50 Aipl1 ENSMUSG00000040554 ENSMUST00000059082,ENSMUST00000048207 2 2 2 81 11 71843844 71843939 CTTCAGACCAAGGAGAAGC 59 71843781 71843799 GGCAGTAGTTGAGGATCAG 59 NA InUTR Mus musculus 50 Erc2 ENSMUSG00000040640 ENSMUST00000100776,ENSMUST00000100777,ENSMUST00000079438 2 3 5 81 14 28853666 28853684 CAAGGAGGTGGAGAATGAG 59 28859666 28893330 ATCTTTCATGTGCCTGAGAG 59 NA Mus musculus 50 Rbbp8 ENSMUSG00000041238 ENSMUST00000047322,ENSMUST00000115861 3 2 2 81 18 11881172 11881190 GCTTGCATCAGTTCTTCAG 59 11881234 11883929 TTCAAAGGACGTATCTTGGT 58 NA Mus musculus 50 Rap1gap ENSMUSG00000041351 ENSMUST00000105835,ENSMUST00000047243,ENSMUST00000105834,ENSMUST00000105833,ENSMUST00000097837 3 5 6 104 4 137277781 137277799 GACTGAGCAACAAGAAACC 58 137277867 137280619 GGACAATCAGGGATATGCC 59 NA Mus musculus 50 Rpl21 ENSMUSG00000041453 ENSMUST00000035983,ENSMUST00000075453,ENSMUST00000099272 3 3 3 80 5 147646075 147646575 TAGACATCAAGGGAATGGG 58 147646619 147646637 CATTGTAGACTCTTCCGGT 58 NA Nonspecific Mus musculus 50 Gcn1l1 ENSMUSG00000041638 ENSMUST00000064454,ENSMUST00000094427 3 2 2 100 5 116060845 116060863 CTCCTGTTCCACATCTCTG 59 116060925 116061043 GTGATGATTGCCTTGTTAGAC 59 NA Mus musculus 50 Dao1 ENSMUSG00000042096 ENSMUST00000112292,ENSMUST00000047033 2 2 3 81 5 114469950 114469969 TTAAACACTTCATCCTCACC 57 114470013 114470947 GTAACTGTCTTGGAACCTG 57 NA Mus musculus 50 D330045A20Rik ENSMUSG00000042498 ENSMUST00000113030 3 1 2 109 X 136046181 136047693 TACTACTGGAGGGCATAGAG 59 136047764 136047783 CAATAACCGTGTTCTTTGCT 59 NA Mus musculus 50 Ccdc60 ENSMUSG00000043913 ENSMUST00000050178,ENSMUST00000086483,ENSMUST00000111995 1 3 3 60 5 116640086 116640105 AGTTCTCAGATATCCACTGC 58 116630897 116630915 TTTAGCTTCTCACAGTCGT 58 NA DesignNoJunction Mus musculus 50 Hjurp ENSMUSG00000044783 ENSMUST00000065420 1 1 3 95 1 90173801 90173819 GACGTTAACCTACGAGACG 59 90164588 90171621 CTCTTCTCTGCGTTCTGAG 59 NA Mus musculus 50 Trim39 ENSMUSG00000045409 ENSMUST00000042717,ENSMUST00000113706 3 2 4 143 17 36397863 36398451 CTTAAACAGCTAATTGCGGA 58 36397739 36397757 GTAGAAAGTGAAACGCTGC 59 NA Mus musculus 50 Pofut1 ENSMUSG00000046020 ENSMUST00000049863,ENSMUST00000099191 1 2 4 92 2 153087164 153091436 CTTCAAAGACAAGGTGAGG 57 153091492 153091510 TTTCCAATGAAGTGGTCAG 57 NA Mus musculus 50 0610025J13Rik ENSMUSG00000046683 ENSMUST00000062256 1 1 1 281 4 97988172 97988190 CAGTCAAAGCTTCCAAGGA 59 97989236 97989254 GAAATGCTGTTGCTAGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bri3 ENSMUSG00000047843 ENSMUST00000110693 2 1 2 104 5 145016707 145016725 TAACATCCACAGTCGAACG 59 145065897 145065918 TCTTTAACTGCTGACTCATCTC 59 NA DesignNoJunction Mus musculus 50 Cyb5r2 ENSMUSG00000048065 ENSMUST00000052438 3 1 1 84 7 114900478 114900496 AAATCAGTCACAACACCAG 57 114898312 114900430 TGGACATAGTTACCGACAG 58 NA Mus musculus 50 Nrip1 ENSMUSG00000048490 ENSMUST00000054178 2 1 1 69 16 76352726 76352744 TAACATTCGGGAGGAACAC 59 76331068 76331086 GGAGTCTTCAGATTCTCCG 59 NA DesignNoJunction, InUTR Mus musculus 50 Rnf24 ENSMUSG00000048911 ENSMUST00000110194,ENSMUST00000059372 3 2 2 80 2 131130036 131130055 TGTCTAGAAGACTTCAAGCC 59 131129304 131129995 CTTAACAAGGCACTTTCTGTG 59 NA Mus musculus 50 Frmpd4 ENSMUSG00000049176 ENSMUST00000112147,ENSMUST00000112149,ENSMUST00000112146 1 3 3 80 X 163953837 163960036 ATTCAGCCCTATCCATCTC 58 163953775 163953793 CACTTTGACTGGATTGGAC 58 NA Nonspecific Mus musculus 50 Arhgap23 ENSMUSG00000049807 ENSMUST00000107602,ENSMUST00000107601 2 2 3 61 11 97336718 97337370 GAAGAACAAGATGGAACCC 58 97337395 97337413 ATGTCCTTACCAATGTTGG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Gpr23 ENSMUSG00000049929 ENSMUST00000060576 1 1 1 144 X 104119480 104119498 GATAAATCTGGTGCCAGAG 57 104125553 104125574 GTCAATAAATCTTCTGTCACCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Irf2bp2 ENSMUSG00000051495 ENSMUST00000054960 1 1 1 60 8 129115220 129115239 TGGAGGATACTCACTTTGTG 59 129115179 129115198 CAAGGGAAACAGAACTTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 D630039A03Rik ENSMUSG00000052117 ENSMUST00000063816 2 1 1 60 4 57923130 57923148 CAGTGTCAAAGTCAGGAGG 59 57923088 57923106 GATACTGAGCTCTAGAGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Immt ENSMUSG00000052337 ENSMUST00000114151 3 1 4 120 6 71802757 71802775 CAGGTGATACACTTTCGGT 59 71802859 71806921 AAACTCTTGGCTAGAGCTG 59 NA Mus musculus 50 Pbx1 ENSMUSG00000052534 ENSMUST00000064438 3 1 3 83 1 170113740 170115094 AATCACAGGTGGATACCCT 59 170113675 170113693 GACTGTACATCTGACTGGC 59 NA Mus musculus 50 Plekhg3 ENSMUSG00000052609 ENSMUST00000101279,ENSMUST00000075249 1 2 2 81 12 77666224 77666482 CAATACAGTATCCAGGCCA 58 77666527 77666545 GGTGGTTCTCCAAGATGAG 59 NA Mus musculus 50 Pcdh15 ENSMUSG00000052613 ENSMUST00000105430,ENSMUST00000105428,ENSMUST00000105427,ENSMUST00000105426,ENSMUST00000105425,ENSMUST00000092420,ENSMUST00000105424,ENSMUST00000064562 2 8 10 85 10 73409881 73513845 CCAGTATGACGATGACTGG 59 73514384 73514402 TCTCTTCATCAATGGCCAC 59 NA Mus musculus 50 1200016B10Rik ENSMUSG00000052748 ENSMUST00000086279,ENSMUST00000064771,ENSMUST00000111883 2 3 3 80 1 153241896 153244347 AGTTGAACGCAGAAGTACC 59 153241834 153241852 GCTCCAGTAGAATGGACAG 59 NA Mus musculus 50 Grk4 ENSMUSG00000052783 ENSMUST00000001112 3 1 3 81 5 35062533 35072667 GTATACAGAGACCTAAAGCCAG 59 35074145 35074165 CCATAGCTAGACCAAGATCTG 59 NA Mus musculus 50 Defb37 ENSMUSG00000053695 ENSMUST00000066282 2 1 1 69 8 18986391 18986409 AATAAAGACACCTGTCGCC 59 18986340 18986358 TTCCTTCATAACAGGTGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Jmjd2d ENSMUSG00000053914 ENSMUST00000115647,ENSMUST00000058796,ENSMUST00000115648 3 3 3 60 9 14267540 14267560 GAGACTTAATAGTCGACTCAG 57 14267500 14267519 GAAGCTGTCATAAGATGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Atpif1 ENSMUSG00000054428 ENSMUST00000067496 3 1 1 128 4 132089212 132089230 GAAGAGGATCGGTACTTCC 58 132086630 132086649 CTTATGGCGTTCAATTTGCT 59 NA DesignNoJunction Mus musculus 50 Ntrk2 ENSMUSG00000055254 ENSMUST00000078541,ENSMUST00000079828,ENSMUST00000109840,ENSMUST00000109839,ENSMUST00000109838 1 5 5 107 13 58962854 58962872 AGTATGGGAAGGATGAGAG 57 58973123 58975697 TGGTCCAGTCTTCATAGAG 57 NA Mus musculus 50 Sfrs11 ENSMUSG00000055436 ENSMUST00000072875,ENSMUST00000069025 2 2 5 92 3 157675163 157675287 ACAAAGACGTCAAACAGGT 59 157675089 157675107 CTGTTGGTCTCTTCTCCTC 58 NA Mus musculus 50 Lair1 ENSMUSG00000055541 ENSMUST00000068865 1 1 6 80 7 4014682 4014702 GTCACTTCATCCAGTTATCCT 59 3962436 4007525 AGCCAAGATGTATCCTCCT 59 NA Mus musculus 50 2410044A07Rik ENSMUSG00000056228 ENSMUST00000049461 1 1 4 80 8 11518971 11518989 ACTTCCTGAAGACCTTCTC 58 11518530 11518928 CACTGTATTCAATGGCTGAC 58 NA Mus musculus 50 Skap1 ENSMUSG00000057058 ENSMUST00000100519 1 1 7 93 11 96351164 96351182 TGCAGAATGAGAACCTCAG 59 96351238 96354204 AGTACAATAATGCAGCTGGA 59 NA Mus musculus 50 Cep170 ENSMUSG00000057335 ENSMUST00000057037 2 1 2 80 1 178672774 178680070 GAAGAGATAGCCAGGATCAG 59 178672713 178672733 CACTGAATCTATTTCTCCTGC 58 NA Mus musculus 50 Sphk2 ENSMUSG00000057342 ENSMUST00000107738,ENSMUST00000107737,ENSMUST00000072836 2 3 3 121 7 52967914 52967933 TATTGGTCAATCCCTTTGGG 59 52967708 52967830 ATGGTTCTGTCGTTCTGTC 59 NA Mus musculus 50 Usf2 ENSMUSG00000058239 ENSMUST00000058860,ENSMUST00000108119 2 2 2 82 7 31732038 31732057 AGATCAACAACTGGATCGTC 59 31731890 31731993 CCCTTTACTTGCTCCTGTC 59 NA Mus musculus 50 Max ENSMUSG00000059436 ENSMUST00000110395,ENSMUST00000082136 1 2 2 72 12 78040981 78040999 GACATTGATGACCTCAAGC 58 78039716 78039734 TTGATCTTGCCTTCTCCAG 59 NA DesignNoJunction Mus musculus 50 Mbtd1 ENSMUSG00000059474 ENSMUST00000063645 1 1 7 168 11 93787632 93790937 ATTAGAAAGGTGCTGGCTG 59 93791069 93791087 AGAATGGAGTACCTCTGGG 59 NA Mus musculus 50 Mbtd1 ENSMUSG00000059474 ENSMUST00000107853,ENSMUST00000063718,ENSMUST00000107854,ENSMUST00000021221,ENSMUST00000063645,ENSMUST00000107852 1 6 7 80 11 93784526 93784547 TATGTGGGTCTGATATTCATCC 59 93784585 93785116 TATGTTGAACAGTTCTAGGAGG 59 NA Mus musculus 50 Tsga10 ENSMUSG00000060771 ENSMUST00000041815,ENSMUST00000114902 1 2 5 80 1 37840862 37858573 GTTGAGCAACACCTAAACG 59 37840800 37840819 CTCCTCCATCTTCACAAGAG 59 NA Mus musculus 50 Csn1s2b ENSMUSG00000061388 ENSMUST00000072539,ENSMUST00000113279 3 2 3 99 5 88242975 88242993 CAGAATATGGATGTGGCCT 59 88245681 88247977 TGTCAGATACCTTCATGGG 58 NA Mus musculus 50 Armc9 ENSMUSG00000062590 ENSMUST00000113309,ENSMUST00000027434,ENSMUST00000027006 1 3 3 84 1 88061353 88061371 AGTTTCTGCCCTTCTATGC 59 88061418 88066495 GTCCAAGAATCCTGGAAGAG 59 NA Mus musculus 50 Atp11c ENSMUSG00000062949 ENSMUST00000101527 2 1 2 97 X 57482421 57489743 AAGTGCCAGGAGAAATCTG 59 57482342 57482361 ATTCGTCTGAGAATGTTCGT 59 NA Mus musculus 50 Crb1 ENSMUSG00000063681 ENSMUST00000027616 1 1 3 80 1 141128346 141128365 GTGAAGAGGACATCACGAG 59 141128284 141128302 CATAGGAACCTGTTGACCA 58 NA Mus musculus 50 Utp14a ENSMUSG00000063785 ENSMUST00000080713,ENSMUST00000114979 1 2 2 80 X 45616201 45616658 GAGAGGTTGAACAGATCCA 58 45616702 45616720 TCTGAACAACAGAATCCCA 58 NA Mus musculus 50 Crem ENSMUSG00000063889 ENSMUST00000025069,ENSMUST00000115873 3 2 6 162 18 3273548 3273566 TGACATGCCAACTTACCAG 59 3267715 3273422 TTCTTTAGCAGCTTCCCTG 59 NA Mus musculus 50 Plcxd1 ENSMUSG00000064247 ENSMUST00000086687,ENSMUST00000112535 2 2 2 158 5 110529301 110529319 TAAGAACGTGTTGACCGTC 59 110530413 110530431 CAGTATGTCATCGTGTCGT 59 NA DesignNoJunction Mus musculus 50 BC023744 ENSMUSG00000066894 ENSMUST00000111967,ENSMUST00000086464,ENSMUST00000111965 1 3 3 132 5 117801677 117801695 CAGGAGACAAATGAGACAG 57 117801791 117802768 CACTGTCATCCTGAAACTC 57 NA Mus musculus 50 Klra7 ENSMUSG00000067599 ENSMUST00000112013,ENSMUST00000049304,ENSMUST00000112012,ENSMUST00000088011,ENSMUST00000032286 3 5 5 80 6 130176509 130176528 TGGAGTGGATGTAAACAGAC 59 130174198 130176468 AAGGAACTTCAGTTCATCCTC 59 NA Nonspecific Mus musculus 50 Htatsf1 ENSMUSG00000067873 ENSMUST00000088652 2 1 2 80 X 54317371 54318189 CCTTCTGTTTGATAGACACC 57 54318231 54318250 GTCTGAATACAATGGTCAGC 58 NA Mus musculus 50 2600009E05Rik ENSMUSG00000068290 ENSMUST00000110257,ENSMUST00000089559 3 2 2 80 2 130484442 130487485 GGAAGAACAGAAGGAGGAG 58 130484380 130484399 TTCAGTTTCAGGTACTCCTC 58 NA Mus musculus 50 Msto1 ENSMUSG00000068922 ENSMUST00000090941,ENSMUST00000087075 3 2 2 87 3 88717549 88717567 GACGTCTTGTACAGAACAG 57 88716841 88717499 TCAGACTACCTTTCAGATCC 58 NA Mus musculus 50 Rnf121 ENSMUSG00000070426 ENSMUST00000106954,ENSMUST00000096639,ENSMUST00000106953 2 3 3 189 7 109191159 109220659 GGTTGATATGTCAGACCTCTC 59 109183967 109188075 GGTCACCATATTGTAAGAACG 58 NA Nonspecific Mus musculus 50 Rhox1 ENSMUSG00000071773 ENSMUST00000115210,ENSMUST00000096460 2 2 2 80 X 34757648 34757667 TACATCAGTGCACAAGACAG 59 34754028 34755549 CCTTTGAAACCAATTCTGCA 59 NA Mus musculus 50 Ptrh2 ENSMUSG00000072582 ENSMUST00000108022,ENSMUST00000108021,ENSMUST00000100665 2 3 3 63 11 86503372 86503390 TCAAGTGCTCAAAGAGTGG 59 86503417 86503435 TTCATCTGGAGCTTTGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ccl27 ENSMUSG00000073888 ENSMUST00000108036,ENSMUST00000108035,ENSMUST00000108033,ENSMUST00000108037,ENSMUST00000074387 1 5 6 162 4 41716755 41716773 GATTGTCCACATGGAACTG 58 41716422 41716440 TAAACTGGGTACAGTCCCT 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Sirpb1 ENSMUSG00000074677 ENSMUST00000108352 1 1 4 88 3 15702592 15732155 AGTGAAAGAACTGAAGACGG 59 15702523 15702541 CAGTGGCAGCAATTAACAG 59 NA Nonspecific Mus musculus 50 Eif4e1b ENSMUSG00000074895 ENSMUST00000110003,ENSMUST00000066241 3 2 2 124 13 54888234 54888252 TTTGAGGAATACAGCAGGG 59 54888340 54888654 TATATTTGCCCGATCTGCA 58 NA Nonspecific, InUTR Mus musculus 50 NM_001033768.2 ENSMUSG00000074997 ENSMUST00000099659 1 1 1 60 2 104556405 104556424 GAGAACCCTGCTTAATACAC 57 104556364 104556382 TGGTTTCTTAGTGTTGCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gm1587 ENSMUSG00000075512 ENSMUST00000100372 1 1 1 87 14 78196802 78196820 AAGGATGGAAACAGCAGAG 59 78194801 78194819 GAAGAGCTTCATTGACCAC 58 NA DesignNoJunction Mus musculus 50 IGKV4-79 ENSMUSG00000076541 ENSMUST00000103342 3 1 1 121 6 68993092 68993110 TATAGCACATCCAACCTGG 58 68992989 68993007 TGGCAGAAATAAGAGGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV8-27 ENSMUSG00000076580 ENSMUST00000103381 2 1 1 60 6 70121845 70121863 CATCAGCAGTGTACAAGCT 59 70121803 70121822 CGAGGAGAGGTATTGATGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trappc2 ENSMUSG00000079317 ENSMUST00000116495,ENSMUST00000112194 1 2 4 131 X 162887743 162887762 GTTTATAGCTCATGCTGCTC 58 162887856 162888570 AATCTCATATGCCCTGCAG 59 NA Mus musculus 50 Zfx ENSMUSG00000079509 ENSMUST00000088102,ENSMUST00000113927,ENSMUST00000113926 2 3 4 80 X 91327304 91327504 GGAGAAGATGACTTAGGTGG 59 91327243 91327262 TGGATCGAGTAGTTCAACTC 58 NA Mus musculus 50 OTTMUSG00000017155 ENSMUSG00000079631 ENSMUST00000115171,ENSMUST00000115172 3 2 2 134 X 34996581 34996599 ACCATAGATTCACCCAGTG 58 34998568 34999777 GAAACCATCTCTTCACTATGG 58 NA Nonspecific Mus musculus 50 NP_001092786.1 ENSMUSG00000079638 ENSMUST00000115191 3 1 1 95 X 34827101 34827119 AATGTAAAGCATGTGTCCG 58 34827178 34827196 CACATTGAAGCTCTGTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:3702087 ENSMUSG00000079723 ENSMUST00000097428 3 1 1 122 17 7283667 7283686 ATGTGGAGGTTTATGTTCAG 57 7285626 7285646 CAGTGAAATCTCTTCTCACAG 58 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Klra1 ENSMUSG00000079853 ENSMUST00000032288,ENSMUST00000080955,ENSMUST00000081796 1 3 3 90 6 130314362 130322846 TCTAAACTTGCCTTGAACAC 58 130314291 130314311 CACAGTTACCATTGTCTAGTC 58 NA Mus musculus 50 mmu-mir-183 ENSMUSG00000065619 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Hist2h3c2 ENSMUSG00000075032 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-669a-1 ENSMUSG00000076018 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Myo18a ENSMUSG00000000631 ENSMUST00000108375,ENSMUST00000102488,ENSMUST00000108376,ENSMUST00000000645,ENSMUST00000092887,ENSMUST00000092886,ENSMUST00000100794,ENSMUST00000092884 1 8 10 103 11 77660931 77661435 GAAGAACCAGCTGGAAGAG 59 77661502 77661520 TGTCATCAATCTGCAGGTG 59 NA Mus musculus 50 Oprm1 ENSMUSG00000000766 ENSMUST00000100088 2 1 21 69 10 3557433 3557451 GGCCCTCTATTCTATCGTG 59 3555546 3557403 GCTTACAATCACATACATGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Oxa1l ENSMUSG00000000959 ENSMUST00000000985 2 1 1 116 14 54986777 54986950 ATCCTACCTCTCACTCAGG 59 54987030 54987048 GAGATCTTGGAACCACCAG 59 NA DesignNoJunction Mus musculus 50 Marveld3 ENSMUSG00000001672 ENSMUST00000001722 1 1 2 83 8 112483662 112483680 ATATTACCAGTCGGAAGCG 59 112472547 112483615 ATTATCTGCACCACACCTC 59 NA Mus musculus 50 Tmem25 ENSMUSG00000002032 ENSMUST00000114705,ENSMUST00000002100,ENSMUST00000085951 3 3 3 89 9 44606263 44606281 AACATGAGCTTAACTGCTC 57 44604686 44606210 TCTCTGGTTTGAATTGCAC 58 NA Mus musculus 50 Daxx ENSMUSG00000002307 ENSMUST00000079421 1 1 1 128 17 34047607 34048194 CTTTGAAGAGTTCCTTGAACTG 59 34048283 34048301 AGGATGTTGCAGAACTCTG 59 NA Mus musculus 50 Mea1 ENSMUSG00000002768 ENSMUST00000002845 3 1 1 133 17 46818828 46818846 CATCCAAGATCGGATCCAG 59 46819054 46819679 GCTCTACATGTTCTGGGTC 59 NA Mus musculus 50 Mpnd ENSMUSG00000003199 ENSMUST00000003267,ENSMUST00000097305 1 2 2 82 17 56151376 56151702 GTTCCTCTTGGACTTCCAC 59 56151747 56151766 TCTGATTGTTGATGTCCCAG 59 NA Mus musculus 50 Ccdc94 ENSMUSG00000003208 ENSMUST00000086869 3 1 1 111 17 56100229 56101453 AACATGAGGTGTAAGACGTG 59 56101527 56101545 AGAATCGGAAGATTGGCAG 59 NA Nonspecific Mus musculus 50 Pld3 ENSMUSG00000003363 ENSMUST00000003453 1 1 1 82 7 28326152 28326170 CATCGCATCCTTCTACTGG 59 28324673 28326106 GAAGAACCTCTTCACCCTG 59 NA Mus musculus 50 Pax2 ENSMUSG00000004231 ENSMUST00000004340,ENSMUST00000111979 3 2 3 164 19 44836365 44863274 TCCATCAACAGGATCATCC 58 44865222 44865240 GTTGATGGAGTAGGATCCC 58 NA Mus musculus 50 Insrr ENSMUSG00000005640 ENSMUST00000029711 1 1 1 84 3 87618429 87618447 TATCAAATGAGCAGGTGCT 58 87618495 87619065 AGCTCTTGTAGCTGAATCG 59 NA Nonspecific Mus musculus 50 Prkag3 ENSMUSG00000006542 ENSMUST00000081636,ENSMUST00000113672 3 2 2 83 1 74788072 74791042 GTCAATGAATCTGGTCAGGT 59 74787840 74787858 TAGGTGGTTGTAGGTTTGC 59 NA Mus musculus 50 Tex15 ENSMUSG00000009628 ENSMUST00000089962 1 1 2 80 8 34675610 34675628 AAAGGCAGGTAATGGACAG 59 34675672 34681059 GAACATGCTCTTTCAAGCC 59 NA Mus musculus 50 Cnksr3 ENSMUSG00000015202 ENSMUST00000015346,ENSMUST00000105621 1 2 2 61 10 3217474 3217492 GGATCTATACATCCCTCCC 57 3217517 3219714 AACTCACATTCTCATCCCG 59 NA DesignNoJunction Mus musculus 50 Gzmf ENSMUSG00000015441 ENSMUST00000022757 1 1 1 80 14 56824347 56824764 CTACTTACAGTGGTGACTCC 59 56824286 56824304 TCCTGTTTAGCCCATAGGT 59 NA Mus musculus 50 Aph1a ENSMUSG00000015750 ENSMUST00000015894,ENSMUST00000056710 3 2 2 88 3 95699692 95699710 TCTTTGATGCCTGTGAGAG 59 95699762 95700171 GTTCAGGAATGTCAGTCCC 59 NA Nonspecific Mus musculus 50 Skiv2l2 ENSMUSG00000016018 ENSMUST00000022281 3 1 1 81 13 113701164 113701183 TTTCTTTCGGCTACTATTCC 57 113700107 113701120 AAATAACATGACAGGGCTG 57 NA Mus musculus 50 Spag7 ENSMUSG00000018287 ENSMUST00000018431 3 1 1 83 11 70478358 70478498 GAGCATACTACATGATGTGGT 59 70478295 70478314 ATCATGACATAGCGACAGTC 59 NA Mus musculus 50 Kpna2 ENSMUSG00000018362 ENSMUST00000018506 3 1 2 80 11 106853966 106853985 TGAGGACATTGTTAAAGGCA 59 106853429 106853923 GAAAGCAATTTCCGAGCAG 59 NA Nonspecific Mus musculus 50 Gabarap ENSMUSG00000018567 ENSMUST00000018711,ENSMUST00000108592 2 2 2 98 11 69805887 69805905 CAAAGCTCGGATAGGAGAC 59 69806199 69807975 TTCTTCATGGTGTTCCTGG 59 NA Mus musculus 50 Dusp6 ENSMUSG00000019960 ENSMUST00000020118 1 1 1 129 10 98727608 98728636 TTTCATAGATGAAGCCCGA 58 98728729 98728747 GTAAGCATCGTTCATGGAC 58 NA Mus musculus 50 Pcbd1 ENSMUSG00000020098 ENSMUST00000020298 1 1 1 80 10 60555361 60555379 TTCATGACAAGAGTAGCCC 58 60555421 60556563 GATATGGACCTTGTTGTACAC 58 NA Mus musculus 50 Srgap1 ENSMUSG00000020121 ENSMUST00000081688,ENSMUST00000020322 3 2 2 83 10 121306827 121306846 ATCTCCTAACACTTGAAGCA 58 121292573 121306784 GATCACAGCAGTCTATTAAGTC 58 NA Mus musculus 50 Egfr ENSMUSG00000020122 ENSMUST00000020329,ENSMUST00000102884,ENSMUST00000020325 3 3 3 81 11 16771025 16771043 GCCTGACTACTACGAAGTG 59 16771088 16771596 GCCATTACAAACTTTGCGA 59 NA Mus musculus 50 Lgr5 ENSMUSG00000020140 ENSMUST00000020350,ENSMUST00000105272 2 2 2 80 10 114939469 114939487 GCTGGAAATGCTTTGACAC 59 114932282 114939425 GTTGTTCTGCAGCATAAGC 59 NA Mus musculus 50 Jsrp1 ENSMUSG00000020216 ENSMUST00000020435 2 1 1 254 10 80275144 80276208 GTCTCTATGACTACCAGAGG 58 80274719 80274739 GGCTATATGAGACCCTAACTC 58 NA DesignNoJunction, InUTR Mus musculus 50 Zfp354a ENSMUSG00000020364 ENSMUST00000102766,ENSMUST00000109122,ENSMUST00000109121 1 3 5 137 11 50874368 50874386 TTGACATTTGAAGACGTGG 58 50874487 50874921 TTTGGTAAACGGGAATCCC 59 NA DesignNoJunction Mus musculus 50 Adcy1 ENSMUSG00000020431 ENSMUST00000020706 2 1 1 80 11 7061889 7061908 AGATTAAGACCATTGGGAGC 59 7061951 7065430 AGATGGACTTCTTAGCCCT 59 NA Mus musculus 50 Acaca ENSMUSG00000020532 ENSMUST00000103201,ENSMUST00000020843 1 2 2 103 11 84093919 84093937 CCTATGAACTCAACAGCGT 59 84094004 84103799 GATGTTCCCTCTGTTTGGA 59 NA Mus musculus 50 Acaca ENSMUSG00000020532 ENSMUST00000103201,ENSMUST00000020843 3 2 2 108 11 84093914 84093934 CATTGCCTATGAACTCAACAG 59 84094004 84103799 GATGTTCCCTCTGTTTGGA 59 NA Mus musculus 50 1700108M19Rik ENSMUSG00000020545 ENSMUST00000020853 1 1 1 88 12 36939178 36939197 CCCAAGTTACCAATAAAGCA 58 36935274 36936282 TCATCAAACAGTGTCTTGTC 58 NA Mus musculus 50 Top2a ENSMUSG00000020914 ENSMUST00000068031 1 1 1 80 11 98865190 98865210 ATGGAGAAGTAGCTATTCTGG 58 98865012 98865150 CTTTATATGTCTGAGTCCACG 57 NA Mus musculus 50 Sdccag1 ENSMUSG00000020982 ENSMUST00000021368 2 1 1 80 12 70449917 70453305 ACCCATTACTTCCCTATGGA 59 70449856 70449874 CATCCACTTTAGCATTGCC 59 NA Mus musculus 50 Tmed10 ENSMUSG00000021248 ENSMUST00000040766 2 1 1 128 12 86684491 86685184 GACACTAATGAGTCCACGA 58 86684381 86684400 CTCTATCAACTTCTTGGCCT 59 NA Mus musculus 50 Scgn ENSMUSG00000021337 ENSMUST00000021770 3 1 1 81 13 24058712 24058730 TGGATCTTAATGACTTGGC 57 24054039 24054655 TCAGTAGAAGAAGCATCCA 57 NA Mus musculus 50 Lman2 ENSMUSG00000021484 ENSMUST00000021940 2 1 1 98 13 55452579 55452599 GAAGAACTGCATTGACATCAC 59 55449780 55452519 ATGATGTCGTGGTTGTCAG 59 NA Mus musculus 50 BC055107 ENSMUSG00000021750 ENSMUST00000036070 2 1 1 236 14 9133578 9133596 TGAGCTGCTTATGAACCAC 59 9131256 9131274 CGGACTTTGATGAACTCAG 58 NA DesignNoJunction Mus musculus 50 Kpna3 ENSMUSG00000021929 ENSMUST00000022496,ENSMUST00000053719 3 2 2 80 14 62003583 62003948 ACATTATAGGTGATGGTCCTC 58 62003523 62003543 GATTGATGAAGGACAGAAGAG 58 NA Mus musculus 50 Lcp1 ENSMUSG00000021998 ENSMUST00000110915,ENSMUST00000022575,ENSMUST00000110916,ENSMUST00000110913 2 4 4 95 14 75608362 75610256 ACATCAAGGACTCCAAAGC 59 75610314 75610333 CTGACATGTCAATCACAACC 59 NA Mus musculus 50 Ccdc25 ENSMUSG00000022035 ENSMUST00000022614 1 1 1 80 14 66475722 66479015 GGATGAACTTAGGAGCTACTC 59 66483970 66483989 AACTCATCGGAATCGTTACC 59 NA Mus musculus 50 Dct ENSMUSG00000022129 ENSMUST00000022725 2 1 1 83 14 118438882 118438900 AAGACAAGATGACCCAACG 59 118435838 118438836 TTGTAGTCATCCAAGCTGTC 59 NA Mus musculus 50 Map3k7ip1 ENSMUSG00000022414 ENSMUST00000023050 1 1 1 161 15 79989326 79990510 CACACTCACTAACCAGAGC 59 79990635 79990653 TCAGCAAAGTCCACATAGG 59 NA Mus musculus 50 Hoxc10 ENSMUSG00000022484 ENSMUST00000001699 3 1 1 105 15 102798023 102801231 GGATAACGAAGCTAAAGAGG 57 102801298 102801317 CGTCTGGTGTTTAGTATAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Litaf ENSMUSG00000022500 ENSMUST00000023143 3 1 1 96 16 10966550 10966569 AATCCACCTTCGTACTACAC 59 10963462 10963480 CATAGAAGGAGACAGGCTG 59 NA DesignNoJunction Mus musculus 50 Crebbp ENSMUSG00000022521 ENSMUST00000080297,ENSMUST00000023165 2 2 2 80 16 4101604 4101624 AGAAGTGTTTCACAGAGATCC 59 4099718 4101562 CCTTGGAAATTGTCGTCTG 58 NA Mus musculus 50 Zbtb20 ENSMUSG00000022708 ENSMUST00000114694,ENSMUST00000079441,ENSMUST00000114691,ENSMUST00000114690,ENSMUST00000114695 3 5 5 82 16 43611031 43618440 GTTCGTACATACAGGTGAG 57 43618485 43618504 TGTGCTTGATAAGGTAATCC 57 NA Mus musculus 50 BC043118 ENSMUSG00000022723 ENSMUST00000044604 1 1 1 80 16 59503067 59506018 AAAGAGTGGCTTATGGATCG 59 59503006 59503024 TTTGGAATCTCCTTAGGCG 59 NA Mus musculus 50 Tmem41a ENSMUSG00000022856 ENSMUST00000023562,ENSMUST00000023563 1 2 2 82 16 21937106 21937124 CTGGTTCTTGAACCTCTCG 59 21935107 21937060 AAGGGATCAAACCGATGAG 59 NA Mus musculus 50 Setd4 ENSMUSG00000022948 ENSMUST00000023669,ENSMUST00000113951 3 2 2 80 16 93601926 93601945 GACGAAGAGGAAGAACAGAG 59 93599535 93601886 ATCTGTAGCTCTCATTTACTGC 59 NA Mus musculus 50 Wdr51a ENSMUSG00000023345 ENSMUST00000072206,ENSMUST00000068577 3 2 3 97 9 106190425 106197480 CAGCATTATCAGTTACACAGTG 59 106197538 106197556 ATCTTCAGCGTTGAGTCAC 59 NA Mus musculus 50 1300018I05Rik ENSMUSG00000024019 ENSMUST00000024817,ENSMUST00000087910 3 2 3 80 17 29771704 29772771 CTTTATTGAGGCTGTCACC 58 29772814 29772833 TCTACTTTCCGTTTCATCCA 58 NA Mus musculus 50 Dync2li1 ENSMUSG00000024253 ENSMUST00000025101,ENSMUST00000112328 1 2 2 81 17 85044067 85044085 TCCTGAGAAGAGAAAGGTG 58 85044130 85046596 CTTGCTGGTAAACATCAGC 59 NA Mus musculus 50 Hsd17b4 ENSMUSG00000024507 ENSMUST00000025385 3 1 1 80 18 50300038 50302127 ACATTTGGCAGAATAGACGT 59 50302268 50302289 GTCTTCATCACTTATCCTGGAG 59 NA Mus musculus 50 Grpel2 ENSMUSG00000024580 ENSMUST00000062991 1 1 1 86 18 61878476 61879363 ATTTAACCCTGAGATACCAGAG 59 61878411 61878429 ATATCTTCGCGTCTTCCAC 59 NA Nonspecific Mus musculus 50 Rps14 ENSMUSG00000024608 ENSMUST00000025511 1 1 1 117 18 60936736 60937475 GAGGAAACAGGACCAAGAC 59 60938097 60938115 GTGCTATCAGAGGGAATGG 59 NA Nonspecific Mus musculus 50 Asrgl1 ENSMUSG00000024654 ENSMUST00000049948 3 1 1 101 19 9187692 9188686 CATGTAGAGCAAGGAAAGAC 58 9187610 9187628 TTTGTTGACCAAGATGAGG 57 NA Nonspecific Mus musculus 50 Ehd1 ENSMUSG00000024772 ENSMUST00000099884,ENSMUST00000025684 3 2 2 82 19 6297687 6298081 GTAAGATGCAGGAACTCCT 58 6298127 6298145 ATCATCCACTGTATCCAGC 58 NA Mus musculus 50 Scyl1 ENSMUSG00000024941 ENSMUST00000025890 2 1 1 80 19 5760584 5760602 AAGACCATTCGAAGCTTCC 59 5760135 5760542 GACATCCTTCTCTACTTCTGC 59 NA Mus musculus 50 Smc5 ENSMUSG00000024943 ENSMUST00000036334,ENSMUST00000087556 3 2 2 80 19 23332131 23334146 ACCATGGGTGGAATATGAG 58 23332069 23332087 CTGACCTCTTCCTTCACTC 58 NA Mus musculus 50 Hrasls5 ENSMUSG00000024973 ENSMUST00000113313,ENSMUST00000025929 2 2 2 73 19 7693832 7693850 TATGTGGAAGATGACTGCG 59 7711812 7711830 AAGATAGAGGTGATGCTCC 58 NA DesignNoJunction Mus musculus 50 Eif3a ENSMUSG00000024991 ENSMUST00000025955 1 1 1 80 19 60849846 60849865 TTGTTGATGCTTTCCAACTG 59 60849577 60849806 AAGTATGGTCAATACGTACCTG 59 NA Mus musculus 50 Adpgk ENSMUSG00000025236 ENSMUST00000068923,ENSMUST00000026266 1 2 2 80 9 59145491 59145512 GCTTCTTCAGTGATAAAGAGAC 58 59145552 59151308 CTCCTACATAATGCTGAGCT 58 NA Mus musculus 50 Mip ENSMUSG00000025389 ENSMUST00000026455 3 1 1 99 10 127664178 127664196 CTTTGCTACATACGACGAG 58 127664257 127664697 GTAATACATCCCAAAGAGGTG 58 NA Mus musculus 50 Atp5a1 ENSMUSG00000025428 ENSMUST00000026495 1 1 1 81 18 78018971 78018989 GTCATTGAAACACAGGCTG 59 78019034 78019733 CCAAGAAGATCTGTCCGTC 59 NA Nonspecific Mus musculus 50 1600016N20Rik ENSMUSG00000025500 ENSMUST00000026573 1 1 1 80 7 148397463 148397696 TGGATACACGGAAGATCTC 58 148397401 148397419 TGGTGAAGGTCTGTATAGG 57 NA Mus musculus 50 Cant1 ENSMUSG00000025575 ENSMUST00000106289 3 1 5 82 11 118271448 118271466 AGTACAAGGGTCTGTATGC 58 118270189 118271402 GCTTTGAAACCTGCTACAC 59 NA Mus musculus 50 4930412O13Rik ENSMUSG00000025783 ENSMUST00000026889 3 1 2 95 2 9804682 9804701 TTTAATTCGATTCCGTGCAC 59 9804757 9805431 GTATTTCAGCTTCACAACCAG 59 NA Mus musculus 50 Iscu ENSMUSG00000025825 ENSMUST00000026937 2 1 1 249 5 114224374 114225233 ATGAAACTGCAGATCCAGG 59 114227871 114227889 TCAGTTTGTAGTCAGCCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Rhbdd1 ENSMUSG00000026142 ENSMUST00000027322 1 1 1 87 1 82374204 82374222 TATGATGTCTACACAGCGG 58 82374273 82439449 TTCTGGTATTTCCTCGGTC 58 NA Mus musculus 50 Ptprn ENSMUSG00000026204 ENSMUST00000027404 2 1 1 80 1 75258711 75258912 AAGTCTGTATTCAGGATGGC 59 75258650 75258669 GGGAAGTGACTTGTAAGAGG 59 NA Mus musculus 50 Rgs7 ENSMUSG00000026527 ENSMUST00000111184,ENSMUST00000097459,ENSMUST00000097460,ENSMUST00000027812,ENSMUST00000085853 1 5 5 80 1 177009712 177014110 AACTTAAGGTTCTGGTTGG 57 177009650 177009668 CCATATTTCCTGCACTCTC 57 NA Mus musculus 50 Dclre1c ENSMUSG00000026648 ENSMUST00000115066,ENSMUST00000100463,ENSMUST00000115067,ENSMUST00000102988,ENSMUST00000100462,ENSMUST00000061852 2 6 7 147 2 3355357 3358040 GAGTTCAGGTTCATGTGGA 59 3360944 3360963 CCACAGGGTAGTTTATTCCA 59 NA Mus musculus 50 Fcgr2b ENSMUSG00000026656 ENSMUST00000027966,ENSMUST00000081103,ENSMUST00000097469 3 3 3 88 1 172906071 172906089 ACTGTCCATGTGTTCTCAC 59 172898356 172899614 TTTGGAAGATCATGAGTCCC 59 NA Mus musculus 50 2310010M24Rik ENSMUSG00000026765 ENSMUST00000028103 1 1 1 81 2 49798045 49798066 TCTTGATCATCTCAGAGAACTG 59 49798108 49799051 AATGGTGTGGGATCAAGAG 59 NA Mus musculus 50 Mtx2 ENSMUSG00000027099 ENSMUST00000111974,ENSMUST00000028511 1 2 2 80 2 74706443 74706462 GTCAACAATATGCTGCTGAC 59 74706974 74707375 CCTAGCAATAGTGATCTCCC 59 NA Mus musculus 50 Traf6 ENSMUSG00000027164 ENSMUST00000111225 1 1 2 60 2 101525022 101525040 ATCCCAAGAATAGGCAGAC 58 101525064 101525082 AGGTTTCTGTCCATTCTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4921507L20Rik ENSMUSG00000027196 ENSMUST00000028621 3 1 1 109 2 93822678 93822696 AAGATGGGTCAAGAGATGG 58 93822769 93823174 AGTGCTTACTGATTCCCAG 58 NA Mus musculus 50 Acad9 ENSMUSG00000027710 ENSMUST00000011492 1 1 1 80 3 35979207 35980739 AGAAGCTGATCGAACTGAC 59 35980782 35980801 GGATCAACCCAAATTCACTG 59 NA Mus musculus 50 Gfm1 ENSMUSG00000027774 ENSMUST00000077271 2 1 1 80 3 67244104 67244122 TTGCTAACTCAGATGAGCA 58 67244166 67247486 GGATTGCTCGCTTTAAGTC 58 NA Mus musculus 50 Nbea ENSMUSG00000027799 ENSMUST00000029374,ENSMUST00000107951,ENSMUST00000107943 3 3 3 80 3 55883833 55883852 GTGTATGTGTTCAGTGAAGC 59 55862744 55883794 GAAGGTACTCTTATAACCAGGTC 59 NA Mus musculus 50 Ahcyl1 ENSMUSG00000027893 ENSMUST00000029490 2 1 1 80 3 107474155 107474970 AGGCTAACATGATCCTGGA 59 107474093 107474114 GGATCTTCTTAAACACGTTTGG 59 NA Mus musculus 50 Creb3l4 ENSMUSG00000027938 ENSMUST00000029547,ENSMUST00000107369 3 2 2 81 3 90041834 90041981 CTTCATGGAGTGATTTCCAG 58 90041772 90041790 GTTTGGACTTTAGCACTGG 58 NA Mus musculus 50 Pear1 ENSMUSG00000028073 ENSMUST00000090981,ENSMUST00000107587 1 2 4 109 3 87567158 87567176 CTTTCTCCAGTCAGCTACC 59 87564298 87566142 AAGGACACATCAGTGATGG 59 NA InUTR Mus musculus 50 Lmo4 ENSMUSG00000028266 ENSMUST00000029933 2 1 1 110 3 143857449 143857467 GTTATTTGGGAATAGCGGT 57 143857002 143857376 GAACATGTGAAACACTTGAG 57 NA Mus musculus 50 Hsdl2 ENSMUSG00000028383 ENSMUST00000030078,ENSMUST00000107528,ENSMUST00000107529 3 3 3 83 4 59609765 59609786 GAGCAAAGTAGGTCATATTCTC 58 59609830 59610138 ATGGTATAAGCACAGTGCT 58 NA Mus musculus 50 Ermap ENSMUSG00000028644 ENSMUST00000030396,ENSMUST00000097909 2 2 3 123 4 118860312 118861472 AGATGTCAGTTCATATGGAGAG 59 118860015 118860033 GCTATGTAGACCTTGCCAG 59 NA Mus musculus 50 Alpl ENSMUSG00000028766 ENSMUST00000030551 3 1 1 80 4 137303725 137303743 CATTCCCACTATGTCTGGA 58 137302432 137303682 CTCAAAGAGACCTAAGAGGT 58 NA Mus musculus 50 A3galt2 ENSMUSG00000028794 ENSMUST00000030585 2 1 1 60 4 128438739 128438907 ATTATCAGGCTCATAGAAGGC 59 128438929 128438947 GAGGCATTATGGCTGTAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Eif3i ENSMUSG00000028798 ENSMUST00000102593 2 1 1 103 4 129270843 129270862 AACGTAAAGGAACACTCTCG 59 129270665 129270777 GAGTCGAAGAGCTTAGCTG 59 NA Mus musculus 50 Zfp326 ENSMUSG00000029290 ENSMUST00000031227 3 1 1 80 5 106315383 106315402 ATGGATTCCTACCTAAACCA 57 106315445 106317468 CTCATAAGGTCCAAACCTG 57 NA Mus musculus 50 Ereg ENSMUSG00000029377 ENSMUST00000031324 3 1 1 85 5 91517590 91518116 ATTCTGCAGATGTGAAGTG 57 91518165 91518183 CGTATTCTTTGCTCAAGGG 58 NA Mus musculus 50 Spdyb ENSMUSG00000029586 ENSMUST00000031574 1 1 1 81 5 143954028 143956529 TTCTTCAGTCAACCAAGGG 59 143956574 143956592 AATCTGATGACTCGTCCCT 59 NA Mus musculus 50 1700034O15Rik ENSMUSG00000029867 ENSMUST00000031900 1 1 1 71 6 41634597 41634617 GGTGAAGACTCTGATAGTGAG 59 41634649 41635214 TCTTCAGAGGACACTTTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rab43 ENSMUSG00000030055 ENSMUST00000078647,ENSMUST00000113625,ENSMUST00000032134 3 3 3 196 6 87744773 87761341 GTTACAGATTTGGGACACAG 58 87742823 87744614 CTGACTTGTTCCCAATCAG 58 NA Mus musculus 50 Rpn1 ENSMUSG00000030062 ENSMUST00000032143 2 1 1 80 6 88045697 88049274 CTCTATAATCTGGGTGACCA 57 88049315 88049335 CAGAGAATCTATCACTTGCTC 57 NA Mus musculus 50 Slco1c1 ENSMUSG00000030235 ENSMUST00000111837,ENSMUST00000032362 2 2 2 82 6 141493337 141495201 GGCTTTGTGAATCTAGACCA 59 141495245 141495264 GCTATTAGGTAACCAAGCCA 59 NA Mus musculus 50 Recql ENSMUSG00000030243 ENSMUST00000032370,ENSMUST00000100832,ENSMUST00000111804,ENSMUST00000111803 2 4 4 81 6 142323393 142323412 TATGGAAGATCAGCTGATGG 58 142321526 142323350 TACATGTTCCTTAGAGCTGG 58 NA Mus musculus 50 Timp4 ENSMUSG00000030317 ENSMUST00000032462 3 1 1 106 6 115197320 115197339 ATCTGTGCAACTACATTGAG 57 115196487 115197251 ATAGCAAGTGGTGATTTGG 57 NA Mus musculus 50 Mzf1 ENSMUSG00000030380 ENSMUST00000069289,ENSMUST00000005709 3 2 2 61 7 13637086 13637105 ACTCTCCTACCTAAGGAGAC 59 13636923 13636941 CTATGAGGAGAGGTCTGGT 59 NA DesignNoJunction Mus musculus 50 Cyfip1 ENSMUSG00000030447 ENSMUST00000032629,ENSMUST00000085255 1 2 2 80 7 63180513 63180532 ACTAGAATCCAAGTATGCCC 58 63180574 63181674 CTTGCAATTGCAATTTGCTG 59 NA Mus musculus 50 Blm ENSMUSG00000030528 ENSMUST00000081314 2 1 1 84 7 87640928 87640947 GCTGCAAATATTTACCTCCA 58 87639405 87640881 TACTTGCACAGACCTTCTC 58 NA Mus musculus 50 Tmc5 ENSMUSG00000030650 ENSMUST00000098088,ENSMUST00000057320 2 2 2 80 7 125783509 125785728 CTCCCTTTCACTGACTTACC 59 125785771 125785789 AATCTCTTCTGCCACAAGG 59 NA Mus musculus 50 Mvp ENSMUSG00000030681 ENSMUST00000032919 1 1 1 81 7 134131044 134131062 TTCAAGGAGATGACAGAGG 58 134130619 134130999 GAAGTTTCACCTGCATCTC 58 NA Mus musculus 50 Atp2a1 ENSMUSG00000030730 ENSMUST00000032974 2 1 1 80 7 133596291 133596548 GACTTTAATGAGACCAAAGGTG 59 133596232 133596250 CATCTTCTCCACCAAGGTG 59 NA Mus musculus 50 Arhgap17 ENSMUSG00000030766 ENSMUST00000106442,ENSMUST00000098060,ENSMUST00000018324 1 3 3 80 7 130465438 130465457 AACTCTCACAACATGAAGTC 57 130465163 130465395 TATTGGGAATCTCCACCTC 58 NA Nonspecific Mus musculus 50 Stx4a ENSMUSG00000030805 ENSMUST00000033075 3 1 1 82 7 134989635 134989724 GAAGATCACCAATGCTGGA 59 134989769 134989788 TAGACACAAACACCTCACTC 59 NA Mus musculus 50 2400001E08Rik ENSMUSG00000030842 ENSMUST00000033131 2 1 1 77 7 109058256 109058274 CATAGCCTACCTTCAGCTC 59 109058315 109058552 AATGATGTTGCTAGCTGTC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Timm17b ENSMUSG00000031158 ENSMUST00000033498,ENSMUST00000115651 1 2 2 111 X 7478148 7478166 GTCTTCCAGGCTATCAAGG 59 7480853 7483205 CAAAGCTTCCTCCAATCTG 58 NA DesignRelaxed Mus musculus 50 Col4a5 ENSMUSG00000031274 ENSMUST00000112931,ENSMUST00000112930,ENSMUST00000087358,ENSMUST00000033630 1 4 4 80 X 138118251 138120654 ATTCATTAGTCGATGTGCAG 58 138120695 138120715 CAGTGTGGAATCTGAATAGTC 58 NA Mus musculus 50 Slc7a2 ENSMUSG00000031596 ENSMUST00000098816,ENSMUST00000057784 3 2 2 81 8 41987953 41987973 GAAAGGAAATGTGGCTAACTG 59 41988016 41989815 CTCAGAAGGTGGTTCTCTG 59 NA Mus musculus 50 2010004A03Rik ENSMUSG00000031750 ENSMUST00000076846,ENSMUST00000034200 3 2 2 80 8 113273451 113279141 CTGGCTATACTGTCTTGGG 59 113273389 113273408 TTATCTTGGGTCAGAGTCCA 59 NA Mus musculus 50 BC025816 ENSMUSG00000031828 ENSMUST00000034287 2 1 1 125 8 122394577 122398278 TAAACAGTGGATCAAGGTGG 59 122398366 122398384 GTCTCTACAGAAGACAGCG 59 NA Mus musculus 50 4932417I16Rik ENSMUSG00000031951 ENSMUST00000034429 1 1 1 82 8 114439212 114439230 GATCAATGGGACAAGTCCT 58 114438486 114439169 CAGTGGTAACATTTCTTTCCTG 59 NA Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113696,ENSMUST00000113701,ENSMUST00000113697,ENSMUST00000113689,ENSMUST00000050905,ENSMUST00000113684 1 6 16 95 9 66880277 66880295 CATTAATGGCTGCAGAGGA 59 66878896 66879267 GAGTTTCAGCCTCCTTCAG 59 NA Mus musculus 50 Mobp ENSMUSG00000032517 ENSMUST00000093773,ENSMUST00000111627 3 2 5 128 9 120077009 120077027 CTTCACCTTCCTCAACTCC 59 120077117 120082277 CTCCTCAATCTAGTCTTCTGG 59 NA Mus musculus 50 Atxn2l ENSMUSG00000032637 ENSMUST00000040202 2 1 1 80 7 133642744 133643651 TCCGATATGTCTAATGGATGG 58 133642684 133642703 GTCATAGGTGGTCTTCACTC 59 NA Mus musculus 50 Klrc3 ENSMUSG00000033027 ENSMUST00000053164 2 1 2 109 6 129592118 129592737 GTTTCTCCATATGCTGAACTG 59 129591565 129591583 GCTGAAGATAGACTGTGGT 58 NA Mus musculus 50 Pygb ENSMUSG00000033059 ENSMUST00000045441 1 1 1 80 2 150639668 150639686 GACTACATCGAAGCTGTCC 59 150639728 150640730 CTCGAAGAAATTGTCATTGGG 59 NA Mus musculus 50 Pla2g4b ENSMUSG00000033852 ENSMUST00000110761,ENSMUST00000110759,ENSMUST00000044497 2 3 4 81 2 119860783 119860941 GCAGCTCAAGAATGTTATGG 59 119860984 119861003 AAACAGCACTGACAATACTG 58 NA Mus musculus 50 Trim36 ENSMUSG00000033949 ENSMUST00000037011 2 1 1 81 18 46332315 46335212 TTTCTCCAGTGGCATAGAC 58 46332252 46332271 ATGATGCCAGTCTATCAAGG 59 NA Mus musculus 50 Coil ENSMUSG00000033983 ENSMUST00000036649,ENSMUST00000107898 3 2 2 84 11 88849369 88851987 TCAGGAGAAGAGGATCACC 59 88852035 88852053 TGTACTCGAGATGCTACCT 59 NA Mus musculus 50 Mrps17 ENSMUSG00000034211 ENSMUST00000042191 1 1 1 82 5 130222661 130222679 GGGAAGGTGATTGGTACAG 59 130222722 130223792 TACTTCAGTAAGTAGGGATCCA 59 NA DesignNoJunction Mus musculus 50 Pla2g3 ENSMUSG00000034579 ENSMUST00000044682,ENSMUST00000064265 1 2 3 94 11 3389852 3389870 GAAATTTCCGCTTCCACAC 59 3390176 3390194 CATGATGTCGGAGATGGAG 59 NA DesignNoJunction Mus musculus 50 Tiparp ENSMUSG00000034640 ENSMUST00000047906 2 1 1 81 3 65351598 65356469 CATATTTACAGACACTTGGTGG 59 65356511 65356529 TCTGGGCAGATGATTTGTG 59 NA Mus musculus 50 Tmub2 ENSMUSG00000034757 ENSMUST00000036376,ENSMUST00000107144,ENSMUST00000100387 3 3 3 85 11 102149117 102149135 CAAGTTCCTCAATGACACC 58 102149184 102149406 GTCCAGGGAAGTATTTGCT 59 NA DesignNoJunction Mus musculus 50 Map4k5 ENSMUSG00000034761 ENSMUST00000110570,ENSMUST00000110567,ENSMUST00000049239 1 3 3 80 12 70929046 70931427 AAATACAGGCAGATCAACCT 59 70928480 70928499 TCTTCAGGGTAAGTGTTGAC 59 NA Mus musculus 50 1700006J14Rik ENSMUSG00000034764 ENSMUST00000041178 2 1 1 81 10 119808353 119819131 ACACTCAGGATGAAGATGC 59 119819175 119819194 CAGTGGGAAGATAGAGATGG 58 NA InUTR Mus musculus 50 4930524J08Rik ENSMUSG00000035364 ENSMUST00000046721 2 1 1 60 5 100408515 100408533 AGTCTTAAGCTTTGCCTCC 59 100408557 100408575 GACTTCAAAGAATCGTGGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Tsen34 ENSMUSG00000035585 ENSMUST00000108630,ENSMUST00000108629,ENSMUST00000108627,ENSMUST00000067069 1 4 4 93 7 3647206 3652217 ACTTCCTGGTCTATCCTGG 59 3652274 3652292 GATGTGTAGACCACCTTCC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Krt33a ENSMUSG00000035592 ENSMUST00000018399 3 1 1 132 11 99873758 99873776 AGAGGAGTTGAACAAGCAG 59 99873426 99873663 AGAGTTTCTCAGTTCATGCT 58 NA Mus musculus 50 Mgat5 ENSMUSG00000036155 ENSMUST00000038361 1 1 1 87 1 129294207 129308711 CACCATGTTCCCTCATACC 59 129308762 129308780 GTTGATGTGGTGAATGTCG 59 NA Mus musculus 50 4930544G11Rik ENSMUSG00000036463 ENSMUST00000043382 2 1 1 60 6 65903081 65903099 AAGTCAAGCATTTCTGTCC 57 65903122 65903141 CGAAGATCCTTCTTACTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tssc1 ENSMUSG00000036613 ENSMUST00000035657 2 1 1 85 12 29544246 29547831 AGCATGAGCCAGATATACTG 59 29547878 29547897 AGGTAATACTGCTTGTTGGG 59 NA Mus musculus 50 C1qa ENSMUSG00000036887 ENSMUST00000046285 3 1 1 289 4 136453695 136453713 ACCATGACCCTAGTATGGA 58 136452478 136452496 CTGATATTGCCTGGATTGC 58 NA DesignNoJunction Mus musculus 50 Nxt1 ENSMUSG00000036992 ENSMUST00000109961 3 1 2 97 2 148500318 148501019 AGGAAAGCAGACTTCAGTC 59 148501079 148501098 TCTTGAAATCTACTGATGCC 57 NA DesignNoJunction, InUTR Mus musculus 50 Fbxo27 ENSMUSG00000037463 ENSMUST00000039998,ENSMUST00000108282,ENSMUST00000108281,ENSMUST00000108280 3 4 4 142 7 29481781 29483262 ATATCTACCTGCAGGTCAC 58 29483368 29483386 TCGTATGATCACACTGGAG 58 NA Mus musculus 50 1110007C09Rik ENSMUSG00000037960 ENSMUST00000048946 3 1 1 258 13 49303501 49311309 ACAGATCAGACCTACTGTG 57 49300603 49300621 CATGGATGTACAGAGCTCG 59 NA DesignNoJunction Mus musculus 50 Prkab2 ENSMUSG00000038205 ENSMUST00000045743 1 1 1 80 3 97470627 97471289 ACGAATATTTCATGTGACCC 57 97471330 97471350 CTTAATGGACAGTGCATAGAG 58 NA Mus musculus 50 Hoxa7 ENSMUSG00000038236 ENSMUST00000048715 2 1 1 62 6 52165873 52165891 AGATCAAGATCTGGTTCCA 57 52165829 52165847 GGCTCTCATCTTTATGCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Lasp1 ENSMUSG00000038366 ENSMUST00000043843,ENSMUST00000107572 1 2 4 197 11 97694872 97694890 GAGGAGTTTGAGAAGAGCC 59 97695432 97695450 CTTGTACCCACCATAGGAC 59 NA DesignNoJunction, InUTR Mus musculus 50 Rras ENSMUSG00000038387 ENSMUST00000044111 1 1 1 89 7 52276502 52276520 ACTTACTTTGAGGCCTCAG 58 52276573 52276665 TTGTTCCTGGTATTTCCGG 59 NA Mus musculus 50 Edg2 ENSMUSG00000038668 ENSMUST00000107575,ENSMUST00000107574,ENSMUST00000055018,ENSMUST00000107571,ENSMUST00000107570 1 5 6 80 4 58499399 58499417 ATAGTTCTGGACCCAGGAG 59 58450495 58499355 CAATAAAGGCACCAAGCAC 59 NA Mus musculus 50 Taf5l ENSMUSG00000038697 ENSMUST00000093039 3 1 1 89 8 126532187 126533598 AACCTCACAGTCCAATCAG 59 126532116 126532135 AAACTGCACTTCATACTGCT 59 NA Mus musculus 50 Scgb1c1 ENSMUSG00000038801 ENSMUST00000035300 1 1 1 72 7 148032099 148032117 ATCGATGAACTACAGCCTG 59 148032505 148032523 CCTCTTGAGCATCTAGCAC 59 NA DesignNoJunction Mus musculus 50 Ythdf1 ENSMUSG00000038848 ENSMUST00000108876,ENSMUST00000037299 1 2 2 80 2 180653893 180653911 GGTTCTTTGCATCAGAAGG 58 180646904 180653849 ACTGTTACTCGGATTGGAC 58 NA Mus musculus 50 Man2a2 ENSMUSG00000038886 ENSMUST00000098346 1 1 1 85 7 87503263 87503806 ATGGCTTTCAGATACAGCC 59 87503196 87503214 GATATAGGCCATGACTGGC 59 NA Mus musculus 50 Ppp2r4 ENSMUSG00000039515 ENSMUST00000113601 3 1 3 86 2 30282009 30298820 GCTCTCAGATGAAGACTGG 59 30298869 30298888 GGTTCACTTTAGACCAGGAG 59 NA Mus musculus 50 Wdr34 ENSMUSG00000039715 ENSMUST00000113711,ENSMUST00000045622 1 2 2 80 2 29887642 29887660 CAAGTACCTGTTTGCTGTG 58 29887480 29887598 AGTTGTACATCACCTTCCC 58 NA Mus musculus 50 Elavl1 ENSMUSG00000040028 ENSMUST00000116496,ENSMUST00000098950 3 2 2 94 8 4304991 4305009 TTGTGAACTATGTGACTGC 57 4301827 4304934 AGCATATGACACCTTAATGG 57 NA Mus musculus 50 Ndufb10 ENSMUSG00000040048 ENSMUST00000045602 3 1 1 80 17 24859649 24859667 ATCACAGAATGCAAAGAGG 57 24859453 24859605 CTGGTCAACTTTGAAGTCC 58 NA Mus musculus 50 2310057M21Rik ENSMUSG00000040177 ENSMUST00000059438 2 1 1 81 7 138505298 138505319 TGGAAGTATACTTAGGAGAGGA 58 138504467 138505256 TCATGTTCACTGTCATCCA 58 NA Mus musculus 50 Pacsin1 ENSMUSG00000040276 ENSMUST00000114873,ENSMUST00000045896,ENSMUST00000114872,ENSMUST00000097360 2 4 4 81 17 27839732 27839750 AAGATCGAGAAGGCATACG 59 27839794 27841801 CATACTGAGGACCTTTCTCG 59 NA Mus musculus 50 Sgms1 ENSMUSG00000040451 ENSMUST00000099514 3 1 2 80 19 32199005 32199724 AATCAGCAAGTGCTTAAGG 58 32198943 32198962 TTCAAAGTACTGAAATGGCC 58 NA Mus musculus 50 Bptf ENSMUSG00000040481 ENSMUST00000106763,ENSMUST00000106762,ENSMUST00000057892,ENSMUST00000041145 1 4 4 83 11 106928561 106929598 ACACGGACAGAAACATCTG 59 106928496 106928514 AGAACGAATGCCATAAGGG 59 NA Mus musculus 50 Ppp1r14c ENSMUSG00000040653 ENSMUST00000043374 1 1 1 84 10 6920797 6922971 AATTACAGGAAGCTCTCGT 58 6883109 6883127 TTCCTCATGCCTCTTATCC 58 NA Mus musculus 50 Creg1 ENSMUSG00000040713 ENSMUST00000111432 1 1 1 172 1 167694227 167694245 CATGTACCTGAGTCCACTG 59 167700055 167700772 TCTTGTTCACCTTGGTCAC 59 NA Mus musculus 50 Sox16 ENSMUSG00000041287 ENSMUST00000047373 2 1 1 86 11 69469321 69469339 GTACACAACTACCCAAGGG 59 69469389 69469960 GAAGAGGTGTAACTGCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cirh1a ENSMUSG00000041438 ENSMUST00000047629 2 1 1 81 8 109424819 109428136 GTTTGATGTCAAATCAGGGAG 59 109428179 109428197 TATGCACCTGGACTTAGTC 58 NA Mus musculus 50 Ccdc64 ENSMUSG00000041609 ENSMUST00000055408,ENSMUST00000061383 1 2 3 240 5 116113893 116120178 TGACAAAGACCTACAGCTG 59 116112883 116112901 GAGATATCGAACCTGGCAG 59 NA DesignNoJunction Mus musculus 50 Klf8 ENSMUSG00000041649 ENSMUST00000112574,ENSMUST00000039545 3 2 2 80 X 149817606 149819148 TGGATCGGTCAAAGTTGAC 59 149819191 149819210 CCACTTTCAATTGCACTCTC 59 NA Mus musculus 50 Wdr60 ENSMUSG00000042050 ENSMUST00000039349 2 1 1 80 12 117452247 117454966 AGTTGGGTAACAGTCTTTCTC 59 117452187 117452205 CTGAAGGCAGGAATTTGAC 58 NA Mus musculus 50 Tekt3 ENSMUSG00000042189 ENSMUST00000035732 1 1 1 126 11 62884061 62884079 TTGATAGAGACTGAAGGCC 58 62887008 62891629 GAATGGTATCAACTTCCGC 58 NA Mus musculus 50 Hsd3b7 ENSMUSG00000042289 ENSMUST00000046863,ENSMUST00000106272 3 2 3 94 7 134945905 134946310 CTATGTTGGCAATGTTGCT 58 134946367 134946386 CATAGCAGAAATACACCTGG 58 NA Mus musculus 50 Mgat3 ENSMUSG00000042428 ENSMUST00000044970 3 1 1 61 15 80042701 80042719 ACTTTAAACTCGTGTCAGC 57 80042744 80042762 CTTGTCCTCATAGTCACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Asb4 ENSMUSG00000042607 ENSMUST00000043294 3 1 2 86 6 5379843 5380867 ATGACTTGGAGAAACACTGG 59 5380916 5380934 ATCTTGACAGGTGCATGAG 59 NA Mus musculus 50 3222402P14Rik ENSMUSG00000043154 ENSMUST00000075941,ENSMUST00000066657 2 2 3 91 9 101113531 101113549 CTCCATCAGTCTGTAGGAG 58 101108620 101113476 AATCTTGATCACTTCTGGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 AU042671 ENSMUSG00000043679 ENSMUST00000055859,ENSMUST00000100769 1 2 2 80 5 121765446 121765466 GCAAGCTCTCCATATTTATCC 58 121765508 121767221 CTTCTGAGCTACTCAGCAG 59 NA Mus musculus 50 Ccdc60 ENSMUSG00000043913 ENSMUST00000050178 2 1 3 80 5 116584084 116584104 GACATAACAAAGATGAGGCAC 59 116581210 116584042 CAGATCGAAGTACCAGTGG 59 NA Mus musculus 50 0610009B14Rik ENSMUSG00000044062 ENSMUST00000056602 2 1 1 65 12 81787468 81787487 CCTCTAACACTAATATGGGC 57 81787422 81787440 ATTTCTGAGAGGTCTGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Prop1 ENSMUSG00000044542 ENSMUST00000051159 3 1 1 226 11 50765727 50765745 GCTCTGAGGCTTATAGGAG 58 50764738 50765537 GAACCAGACCTGGATTCTG 59 NA DesignRelaxed Mus musculus 50 Tceal3 ENSMUSG00000044550 ENSMUST00000113100 3 1 2 243 X 133201081 133201603 CTGGGTATCCTTAGACAGG 58 133202128 133202148 CAGGCTCTACTTCATCTTCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Tacstd1 ENSMUSG00000045394 ENSMUST00000053577 3 1 1 111 17 88039244 88039262 TGTGACAACTACAAGCTGG 59 88039337 88039639 ATTTAGACGCCAGTTTGGA 59 NA Mus musculus 50 Olfr1367 ENSMUSG00000045508 ENSMUST00000059216 3 1 1 60 13 21439682 21439702 GGAACAAAGATGTCATAGGAG 58 21439724 21439742 CCCTTAGTTGAAATGGCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnk6 ENSMUSG00000046410 ENSMUST00000085818 2 1 1 159 7 30010491 30010509 TACAAGGTGCTTGTCACAG 59 30010138 30010156 CCTGATCATCCTCATCCTG 58 NA DesignNoJunction Mus musculus 50 C77370 ENSMUSG00000046449 ENSMUST00000056502,ENSMUST00000087879 2 2 2 81 X 101283558 101284227 AAACAATGACTCAGAGGACC 59 101283496 101283514 TGGTATAGGCTGGATTGGA 59 NA Mus musculus 50 A930001M12Rik ENSMUSG00000046593 ENSMUST00000049655 2 1 1 60 4 40421563 40421581 CAGTATCATCGTTTGCTCC 58 40421603 40421623 GATGTAGCAACAGTATCTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hrk ENSMUSG00000046607 ENSMUST00000054836 1 1 1 60 5 118636968 118636986 ATCTGACTTCTTGACGGAC 59 118637010 118637028 AATAAAGACACAGCCAGCA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 BC056923 ENSMUSG00000047443 ENSMUST00000086861,ENSMUST00000116555 3 2 2 92 1 93268028 93268963 CTATCTACAGGCAGGACAC 58 93269019 93269037 ATAGCACTGAAGTGAGAGC 59 NA Nonspecific Mus musculus 50 Acot10 ENSMUSG00000047565 ENSMUST00000052910 1 1 1 60 15 20596335 20596353 GCAGAGGACTATCTCAAGG 58 20596293 20596312 ACTTGATGGATGTGTAAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hdhd1a ENSMUSG00000048875 ENSMUST00000056460 2 1 1 60 18 50727928 50727946 TACCTTCCAAACAAAGACC 57 50727886 50727905 AACGATGTGGTGAAATAGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Nrap ENSMUSG00000049134 ENSMUST00000073536 1 1 2 107 19 56452621 56452640 CATAAGATGAAAGGTGCAGC 59 56448947 56452551 CTTGTACTCCACCTCACTC 59 NA Mus musculus 50 Plcxd3 ENSMUSG00000049148 ENSMUST00000096507 2 1 2 202 15 4387236 4387254 GCAAATGCCATACCTTCAG 59 4466736 4466754 TGAGTGGCTAACCATTTCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Ugt3a2 ENSMUSG00000049152 ENSMUST00000072403,ENSMUST00000058565 1 2 2 97 15 9280955 9291207 AATAACTTATGGCAGGTCCA 58 9291267 9291285 CCATGATGTCCTTTCTGCT 59 NA Mus musculus 50 Odz2 ENSMUSG00000049336 ENSMUST00000102801,ENSMUST00000109310 2 2 2 60 11 35855043 35855061 CTGTGATCACCAACCTCTC 59 35853435 35855019 CGCACTTGATCTTGTACCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Vsig8 ENSMUSG00000049598 ENSMUST00000061835 1 1 1 207 1 174491736 174492097 GAAAGTCTCAGACTCCCAG 58 174492268 174492286 GATCTCACTAGCCAAGTCG 59 NA DesignRelaxed Mus musculus 50 A730055C05Rik ENSMUSG00000050270 ENSMUST00000079077,ENSMUST00000061786 1 2 2 92 11 66845735 66847621 TCATCCAAGAATCCAGGTG 58 66847677 66847695 CATGTGTACGTAGACCCAC 59 NA Mus musculus 50 2900046G09Rik ENSMUSG00000050821 ENSMUST00000056518 1 1 1 104 16 20698998 20699016 AATGTTGGAGACACAGTCG 59 20699084 20699354 TACCTGGGAAATACCATGC 59 NA Mus musculus 50 Olfr832 ENSMUSG00000050884 ENSMUST00000060601 3 1 1 60 9 18749494 18749513 TCATCATGAATCCCAAACTC 57 18749535 18749554 AGGATACTTAGCAAGAAGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Fhad1 ENSMUSG00000051435 ENSMUST00000105780,ENSMUST00000051924 3 2 4 80 4 141520548 141520567 TAAGAAAGGAAGAGGCTCAG 58 141519420 141520506 TGTCTTGCATTTGACTTCTG 58 NA Mus musculus 50 Krt9 ENSMUSG00000051617 ENSMUST00000059707 2 1 1 80 11 100051355 100052052 CACTATGAGTCCAAGATGACC 59 100051295 100051313 CACTTGCTTCATGTTGCTC 59 NA Mus musculus 50 5830482F20Rik ENSMUSG00000051735 ENSMUST00000059857 2 1 1 81 7 29580046 29580681 GGAGATAATCACTCAGATCCC 59 29580724 29580742 GCTGGTTCACTACAGACAG 59 NA Mus musculus 50 Fpr-rs2 ENSMUSG00000052270 ENSMUST00000064068 3 1 1 60 17 18030554 18030573 TTTGTTAACCCAACAAGCTC 58 18030596 18030614 CATAGAGCATCGGATTGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Dnahc3 ENSMUSG00000052273 ENSMUST00000046993 1 1 1 82 7 127073772 127074940 TCCTACCAGTCTTACATTGAG 58 127073710 127073728 TCAGCATTCTCATGGAGAC 59 NA Mus musculus 50 Taf9 ENSMUSG00000052293 ENSMUST00000084721 3 1 1 98 13 101424213 101424231 TAACGTGGGAGATCTAGCT 59 101425043 101425061 ATCATCTGTGCATCTTTCG 57 NA DesignNoJunction, InUTR Mus musculus 50 Nup107 ENSMUSG00000052798 ENSMUST00000064848 1 1 1 80 10 117210184 117210348 CCCTAATGTTAATGGAGGGAC 59 117210124 117210143 CTCCAGCAACTAATCTTCCA 59 NA Mus musculus 50 Fank1 ENSMUSG00000053111 ENSMUST00000065359 3 1 1 89 7 141060962 141060980 CATGTCATGATTGACGTGC 59 141061033 141061720 TAGGATCTTCACAAGCCTG 58 NA Mus musculus 50 OTTMUSG00000007026 ENSMUSG00000053957 ENSMUST00000066727 3 1 1 96 3 100317631 100326770 TCTGAATCCTGTCGTTTCTC 59 100326829 100326847 ATACAAGTTGTGGGTCAGG 59 NA Mus musculus 50 NM_134096.2 ENSMUSG00000054863 ENSMUST00000068088 2 1 1 140 15 87511931 87511950 GTGAGATTGTGACCCTAGAC 59 87512053 87550943 TGATAATTCGAGCGTCCAC 59 NA InUTR Mus musculus 50 ENSMUSG00000055831 ENSMUSG00000055831 ENSMUST00000069568 3 1 1 60 1 180186422 180186440 TCACATCAATTGGCCTCTC 59 180186461 180186482 AGTCTCTGGATACAAACTTAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1502 ENSMUSG00000056858 ENSMUST00000074221 3 1 1 60 19 13936563 13936581 CTATAGATGTTGTGCTGCC 57 13936604 13936623 GAAACATTCTGTAGCTGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Acbd4 ENSMUSG00000056938 ENSMUST00000024492,ENSMUST00000107040,ENSMUST00000107039,ENSMUST00000092559 1 4 6 73 11 102972908 102972926 TCTTCTTTATCCTGTGGCC 58 102972963 102972981 CTTGAGTCACCTCTTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Skap1 ENSMUSG00000057058 ENSMUST00000107663 2 1 7 158 11 96351234 96387366 CAAATCCAGGTACTGTTGG 58 96539248 96539269 GAAAGTAGTAACCAAGGATGAC 58 NA Mus musculus 50 A430084P05Rik ENSMUSG00000057135 ENSMUST00000074572 2 1 1 60 11 70611569 70614200 TTAGACAAGGCAGGAACTG 59 70611527 70611546 TCTTCATCTCTTCCATCCTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Olfr782 ENSMUSG00000057151 ENSMUST00000077024 3 1 1 129 10 128787676 128787694 CACAACTGCAAATTGTGGT 59 128787784 128787805 CGGAGAAAGAAATACATTGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1028 ENSMUSG00000057207 ENSMUST00000080698 3 1 1 60 2 85791830 85791848 GAGCTTTAACCTTTCCAGC 58 85791871 85791890 AGCAATAATGAAGGCATAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr934 ENSMUSG00000057424 ENSMUST00000074211 3 1 1 60 9 38789849 38789867 TCCTCATATACCTCCAGCC 59 38789807 38789825 TTCAAGACTTGAACTGCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Krt33b ENSMUSG00000057723 ENSMUST00000073890 2 1 1 94 11 99888851 99888869 ATTCTCTGTGGCAAGTCTG 59 99887896 99888794 TCTGACTCATACTTGGTCCT 59 NA Mus musculus 50 EG381438 ENSMUSG00000058174 ENSMUST00000079755,ENSMUST00000108106,ENSMUST00000108105,ENSMUST00000099128 1 4 4 60 3 37613626 37613644 CCCAAGAGAAAGCATTCCA 59 37613584 37613602 GTATACTGGCAGATGGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Vpreb1 ENSMUSG00000059305 ENSMUST00000075017 3 1 1 70 16 16868828 16868846 AAGATACGACCAGGAACCT 59 16868776 16868794 GTAATACACAGCCTCGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr222 ENSMUSG00000059610 ENSMUST00000071943 1 1 1 60 11 59384424 59384442 CCATCCAGTTACTCACAGG 59 59384382 59384405 GGGTGATTATAGAATAGAAGAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tdpoz1 ENSMUSG00000059676 ENSMUST00000076768 1 1 1 60 3 93474441 93474461 GATTTCATTGCCTACTATGCC 59 93474401 93474419 CCAATATCGACTTCCACTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tdpoz1 ENSMUSG00000059676 ENSMUST00000076768 3 1 1 60 3 93474441 93474459 TTTCATTGCCTACTATGCC 57 93474399 93474417 CTCCAATATCGACTTCCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1029 ENSMUSG00000059873 ENSMUST00000082191 2 1 1 78 2 85816176 85816194 TATGTAAGACCACCCACTG 58 85816236 85816254 GCAGAGGACTTACAAAGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hnt ENSMUSG00000059974 ENSMUST00000075069 1 1 2 156 9 29770467 29770485 CAATTCTATCTCGTGGGCA 59 28986824 29219143 GTTGTCAATTGTGCACCTG 59 NA Mus musculus 50 Tmprss11d ENSMUSG00000061259 ENSMUST00000031175 2 1 1 80 5 86756671 86760106 TGAGATAACATCACTCACTGAC 59 86755580 86755599 AGTGTTATAAGGTCTGGACG 58 NA Mus musculus 50 4932415M13Rik ENSMUSG00000062036 ENSMUST00000077153 2 1 1 81 17 53865261 53867582 GAACTACAAGAAACATGCTCTG 59 53867623 53867642 CCTAGTTGAGTCAGAATGCA 59 NA InUTR Mus musculus 50 Olfr531 ENSMUSG00000062712 ENSMUST00000080153 2 1 1 60 7 147586593 147586611 CTCAGCTATGGCCTATGAC 59 147586551 147586571 CCAGGTACTATAATGCAGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Klhl24 ENSMUSG00000062901 ENSMUST00000023509 2 1 1 83 16 20114751 20114770 CAAGCTTCCAGAATTTACCA 58 20114816 20115972 CTGTTGATTCTTCCACCTG 58 NA Mus musculus 50 Lrrc40 ENSMUSG00000063052 ENSMUST00000072080 2 1 1 80 3 157704558 157704578 TAATCAGCTGACATCTCTTCC 59 157704619 157706539 TTCAGTTTGTTATGGCTGAC 58 NA Mus musculus 50 Grm4 ENSMUSG00000063239 ENSMUST00000088073 2 1 1 81 17 27588999 27591445 GAGGATGATATCAGGAGGGT 59 27588937 27588955 AGCTATCAGAACCCATCCA 59 NA Mus musculus 50 Luzp2 ENSMUSG00000063297 ENSMUST00000116312,ENSMUST00000082373 1 2 2 80 7 62504853 62519661 CTCAAGATGAGGGTAGTTCC 59 62519704 62519722 TTGTGAGCTCTGATTCTGC 59 NA Mus musculus 50 mmu-mir-196a-2 ENSMUSG00000065488 ENSMUST00000083554 2 1 1 60 15 102803804 102803823 TTCATGTTGTTGGGATTGAG 58 102803846 102803864 ACTGATGTAACTCAGGCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pilrb2 ENSMUSG00000066682 ENSMUST00000085889 3 1 1 172 5 138312944 138312962 GGATCTGTCTCGCTTTACC 59 138312473 138312808 GAATTTCCAGCATGCAGAC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 3110035E14Rik ENSMUSG00000067879 ENSMUST00000088666 3 1 1 91 1 9609970 9612683 AAGTCGTTGATTCCTCCAG 59 9612738 9612756 AGAACAGCTCCATGTTCTG 59 NA Mus musculus 50 BC049807 ENSMUSG00000067931 ENSMUST00000088787 1 1 1 119 17 21720097 21721752 AAACATGTCCAAGCATCTG 58 21721835 21721853 TAATTCTCCACCATCACGT 58 NA Mus musculus 50 1200003I07Rik ENSMUSG00000068134 ENSMUST00000089207 1 1 3 142 2 149945675 149962310 CGACATGGATATAGTGACCT 58 149945356 149945571 AATAGTAGCCTATAGCAGCG 58 NA Mus musculus 50 EG638695 ENSMUSG00000068399 ENSMUST00000089789 3 1 1 90 14 51983958 51983976 CTTGCTCAGGCAATTTCAC 59 51984029 51984985 CTCAGCAGACAAAGAAAGGA 59 NA Mus musculus 50 Slc25a31 ENSMUSG00000069041 ENSMUST00000091184 3 1 1 90 3 40520491 40520509 ACACAAGCCTTAAACTTCG 58 40520563 40524428 GAAACCATCTCCAGAACTG 57 NA Mus musculus 50 Gm572 ENSMUSG00000070577 ENSMUST00000105698 1 1 1 131 4 148033168 148038499 CATTCATCCAGGTCTCCAG 59 148040876 148040896 CAATATCCACCTCTAATCCCA 58 NA Mus musculus 50 Klhl9 ENSMUSG00000070923 ENSMUST00000094993 2 1 1 60 4 88366529 88366548 AATCACTCATGACACTTTCC 57 88366488 88366507 CCATTTGTCTGTATCTGGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1320 ENSMUSG00000071764 ENSMUST00000096449 1 1 1 60 X 47037187 47037206 CAGCTTGAATTTCTGTGGAG 59 47037229 47037247 AAGAGGTTTCAAGTCACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 EG434172 ENSMUSG00000072259 ENSMUST00000097044 3 1 1 60 7 48543868 48543886 CACTAGACTTGAGGCAGAC 59 48543910 48543928 GTCTATGTCTGTGAGGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dppa2 ENSMUSG00000072419 ENSMUST00000097175 3 1 1 227 16 48311762 48311780 AAACACAGACTACGCTACG 59 48314142 48314255 TAGACCTCAACTTTCTTGCC 59 NA DesignRelaxed Mus musculus 50 ENSMUSG00000072833 ENSMUSG00000072833 ENSMUST00000101038 2 1 1 76 5 90807841 90807859 CCTTTGTAGGACACGTGAG 59 90807783 90807801 TGTCATCTTCTGAAGAGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073288 ENSMUSG00000073288 ENSMUST00000101687 1 1 1 66 X 10285397 10294016 GGGTTAATGAAACATGCGA 58 10285349 10285368 CACAGACTTGATCTTATGGG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 NM_001025208.1 ENSMUSG00000073403 ENSMUST00000064686 3 1 1 115 17 36280147 36280165 GGAAGGAGCAGAATTACAC 57 36279726 36279941 AAGAACAGCCATGATTACC 57 NA Mus musculus 50 Gm1614 ENSMUSG00000073600 ENSMUST00000097619 1 1 1 60 18 35813786 35813804 TCATCAGGCTTACAAACAG 57 35813744 35813763 GGTTCTATCAGGAGTCTCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073642 ENSMUSG00000073642 ENSMUST00000097684 1 1 1 60 1 79760661 79760680 AGGACCTTGATACTCTTGGA 59 79760700 79760721 AAGAGAACAGTATGTTACTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000008953 ENSMUSG00000073763 ENSMUST00000097904 2 1 1 121 4 121656776 121668723 TGAGATCACTCTATTCGCG 58 121656011 121656029 CCAGGACTTCTTTCTCCAC 59 NA DesignNoJunction Mus musculus 50 Gm1966 ENSMUSG00000073902 ENSMUST00000098144 2 1 1 60 7 113746763 113746781 GTTAAAGGAGAAGGTTGGG 57 113746721 113746739 CTGTCTGTTTGTTGTGACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr651 ENSMUSG00000073928 ENSMUST00000098176 3 1 1 60 7 111701828 111701846 TATAGCACCATCCTGACTC 57 111701870 111701888 TCCTCACAATGATGCTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074232 ENSMUSG00000074232 ENSMUST00000098612 2 1 1 60 9 66646275 66646293 GCTTTGTTTGACATTCCTG 57 66646317 66646335 CTTATCCTGCACAGAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 V1rd22 ENSMUSG00000074289 ENSMUST00000098702 2 1 1 60 7 24539251 24539269 TGTATCCTGAGCTCTTACC 57 24539290 24539311 GTATCACTCTACTCCATTTACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 V1rd21 ENSMUSG00000074332 ENSMUST00000098746 1 1 1 60 7 20943001 20943021 CCAATGACTTTCTGTTTGTCC 59 20942961 20942979 GGCCTCTGTTTAGAACCAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074508 ENSMUSG00000074508 ENSMUST00000098984 1 1 1 132 9 14509106 14509124 CAGAAACAGATCTGCACTG 58 14513787 14521268 ATCTTGGAATCAGATGCCA 58 NA InUTR Mus musculus 50 2210418O10Rik ENSMUSG00000074529 ENSMUST00000081529 1 1 2 145 2 177656451 177656469 GCTTTGCTTGAGACTTCTC 58 177654852 177656149 CTTTCATGCCTTCCATGAC 58 NA Mus musculus 50 ENSMUSG00000074683 ENSMUSG00000074683 ENSMUST00000099208 2 1 1 60 10 118320028 118320046 GCCATGATTTCAGAGTCTC 57 118319986 118320005 ATCTGGAACAAGAAGTATCG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Spnb5 ENSMUSG00000074899 ENSMUST00000099515 2 1 1 80 2 119882145 119882163 CAGAGGCTATCATGGAGAC 58 119881948 119882101 CCTACCTTCAAGAGACTCC 58 NA Mus musculus 50 Olfr1305 ENSMUSG00000074955 ENSMUST00000099608 1 1 1 60 2 111713610 111713628 AACCGTTACGCTATCTGAC 59 111713568 111713588 GCAGCAACTAATATTAGCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074989 ENSMUSG00000074989 ENSMUST00000099651 3 1 1 64 2 104836781 104836799 CACAGACTACAGTTCAGGT 58 104836735 104836755 GCTACAGAGACCATATTGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1045 ENSMUSG00000075198 ENSMUST00000099904 3 1 1 60 2 86038297 86038318 CTGTAGTCTTTATATCTGCAGC 58 86038258 86038279 GATACCAACACTATACTCATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ttc30a2 ENSMUSG00000075272 ENSMUST00000099995 1 1 1 60 2 75815041 75815059 CTCAGGAGACTCACTAAGC 58 75814999 75815018 TGACAACTTCATCATCTCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075396 ENSMUSG00000075396 ENSMUST00000100166 1 1 1 60 15 102684863 102684881 GCTCTTATGTTCTTCCTGC 58 102684821 102684839 AGTCACCATAGTACTGGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pcdhb11 ENSMUSG00000075517 ENSMUST00000100380 1 1 1 94 15 82519658 82520202 TCATTCATGAGGGCATGAC 59 82519582 82519600 AAGTGTTCAGGATGGAAGC 59 NA InUTR Mus musculus 50 BC027382 ENSMUSG00000075562 ENSMUST00000100470 1 1 1 60 14 66016149 66016169 CAGAGACACTAGAATGTCAGG 59 66016190 66016209 AAGGCTTCCTCATCAAAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG432867 ENSMUSG00000075574 ENSMUST00000100493 2 1 1 67 14 63603282 63603300 GACTGTATCTGCTCCTCTC 58 63596691 63603251 CATCCCACTTCTAACTTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-547 ENSMUSG00000076005 ENSMUST00000102051 1 1 1 60 X 65241599 65241617 ATCACTTGAGGATGTACCA 57 65241557 65241576 TCTCACTCAAAGATGTACCA 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 IGKV1-133 ENSMUSG00000076503 ENSMUST00000103304 3 1 1 205 6 67674944 67675348 CTCTGGATTCAGGAAACCA 58 67675516 67675535 GAGTCCAGTTTAGACACCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV2-109 ENSMUSG00000076517 ENSMUST00000103318 1 1 1 60 6 68102543 68102561 GAGAATCAGCAGAGTGGAG 59 68102585 68102603 TTCTAGCAGTTGAGCACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-57-1 ENSMUSG00000076555 ENSMUST00000103356 3 1 1 131 6 69494647 69494841 TCAGTTGCAATGTCCAGAG 59 69494534 69494552 GTACCAGTGCAAGTAACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV6D-6 ENSMUSG00000076774 ENSMUST00000103584 1 1 1 65 14 53441635 53441747 CATACTTGGAAGGACCCAC 59 53441776 53441794 CTTTCTGAGACGGTCACTG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRAV12-1 ENSMUSG00000076838 ENSMUST00000103650 3 1 1 174 14 54157974 54158124 CTCCTAATGCTCAGAAGGA 58 54158262 54158280 TCTTCAGGAGTACCTGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000055181 ENSMUSG00000078090 ENSMUST00000104890 3 1 1 61 2 106713961 106713981 TAAGTATGATCATGAGCGGTG 59 106714004 106714022 CACAACAAAGGCAGATGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4932414J04Rik ENSMUSG00000078962 ENSMUST00000109573 3 1 1 102 11 21404262 21405509 CAAGAAACATCCTCTTTCATCC 59 21404181 21404201 CTGTCTCCTAGAGACAATACC 58 NA InUTR Mus musculus 50 4930449I24Rik ENSMUSG00000079093 ENSMUST00000110598 2 1 1 72 5 147314458 147314476 TATTTCTTGGCGTCTACCG 59 147314511 147315069 GATGCATACGTTCTCATCAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Ott ENSMUSG00000079395 ENSMUST00000112788 1 1 1 80 X 144938432 144947658 AAATTGACAGATCGTCTGCA 59 144947698 144947719 GTTCAACTGTCTCATTTCTTCG 59 NA Nonspecific Mus musculus 50 D5Ertd577e ENSMUSG00000079423 ENSMUST00000113018 2 1 1 60 5 95949447 95950425 ATCAGATACTAGGGTGCCT 59 95950449 95950467 ATTAGGCAGTGAGTGATGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Csprs ENSMUSG00000079457 ENSMUST00000113407 3 1 2 87 1 85198869 85209205 GAAGCTTTGAATGTGGAGC 59 85209256 85209274 TCTAGTCTCAGCCAGTCAG 59 NA Nonspecific Mus musculus 50 A2A3U9_MOUSE ENSMUSG00000079642 ENSMUST00000115253 1 1 1 80 X 33943502 33943520 GCAGCAAACTACTACACCA 59 33944126 33944460 TTCTTCTTAACTTCCCGGAC 59 NA Mus musculus 50 A2AFA6_MOUSE ENSMUSG00000079694 ENSMUST00000115553 1 1 1 138 X 8828631 8831056 TGTCACTAAAGCTATGACCTC 59 8828513 8828531 ATGAACTTGTCCACTGGTG 59 NA Nonspecific Mus musculus 50 Napb ENSMUSG00000079881 ENSMUST00000115997 3 1 1 60 2 148520828 148520847 ACCATTTAAAGTGAGACCCA 58 148520787 148520808 CATGATGAAAGGTAAACCACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:3710590 ENSMUSG00000079997 ENSMUST00000047208 3 1 1 61 14 119275366 119275385 ATCTCTGTGACTATTGTGGC 59 119275324 119275342 TTTCATGGTTTGGAATGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-1193 ENSMUSG00000080411 ENSMUST00000116761 2 1 1 65 12 110953891 110953909 AATGATGCCCACTGTTCTC 59 110953935 110953956 CATAAATGAAGTGTACGTCACC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Mx1 ENSMUSG00000000386 ENSMUST00000113768 2 1 2 81 16 97676751 97676769 AATGTGGACATTGCTACCA 59 97673150 97676706 GGACCATCTCTATGGTCCT 59 NA Mus musculus 50 Lck ENSMUSG00000000409 ENSMUST00000102596,ENSMUST00000067240 1 2 2 113 4 129232862 129232880 TAACCTCATGAAGCAGCTG 59 129229253 129232785 AAATCTACTAGGCTCCCGT 59 NA Mus musculus 50 Clcn4-2 ENSMUSG00000000605 ENSMUST00000007436 1 1 2 141 7 7244434 7244545 GTATCATACACCCTGGAGG 58 7244311 7244329 CTCAGAGATGAGCTCACTG 59 NA Mus musculus 50 Myo18a ENSMUSG00000000631 ENSMUST00000108375,ENSMUST00000108376,ENSMUST00000000645,ENSMUST00000092884 3 4 10 81 11 77667385 77668189 CATCAACAGTTTGCAGGAC 59 77671234 77671252 CTCTGAGTCCACATCTGAG 58 NA Mus musculus 50 S100a5 ENSMUSG00000001023 ENSMUST00000107329,ENSMUST00000001049 3 2 2 60 3 90415454 90415474 GATAACTTGATGAAGAGCCTG 58 90415493 90415514 AGTACTCCTTGAAGTCAATCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ap4e1 ENSMUSG00000001998 ENSMUST00000002063,ENSMUST00000110394,ENSMUST00000110393,ENSMUST00000110392 2 4 4 80 2 126840021 126845032 AAAGAGTGGGTTATTTGGCT 59 126845072 126845093 TTACCACTGTATTCACAAGGAG 59 NA Mus musculus 50 Foxj2 ENSMUSG00000003154 ENSMUST00000112575,ENSMUST00000003238 2 2 2 80 6 122778450 122778469 ACTCTCAGTGAGATTTACCG 58 122778511 122781462 AATGGAATTCTTCCAACCGA 59 NA Mus musculus 50 Cacna1b ENSMUSG00000004113 ENSMUST00000093372,ENSMUST00000041342,ENSMUST00000114447 2 3 7 91 2 24504063 24504081 ACTACTTCAGAGATGCCTG 58 24494722 24504009 GAAGTTGTTCGCTATCTCTG 58 NA Mus musculus 50 Emg1 ENSMUSG00000004268 ENSMUST00000004379 1 1 1 67 6 124654987 124655005 CAGTAGTGACCCAGTTGTG 59 124654658 124654676 CTGTGTACTCCACACTGAC 59 NA DesignNoJunction Mus musculus 50 Hdac9 ENSMUSG00000004698 ENSMUST00000110819,ENSMUST00000110818,ENSMUST00000073838 2 3 4 80 12 35122053 35122072 TAGCAGAGTTTCAGAAGCAG 59 35118078 35122012 CTAGAAGTTCCTTGATGTGCT 59 NA Mus musculus 50 Tle1 ENSMUSG00000008305 ENSMUST00000072695,ENSMUST00000102848,ENSMUST00000107350,ENSMUST00000107349,ENSMUST00000098010,ENSMUST00000074216,ENSMUST00000107355,ENSMUST00000030095,ENSMUST00000107337 3 9 10 91 4 71860384 71860403 TTAAGTTCACTATCCCGGAG 58 71858997 71860333 CTCACACTCCAATTTAAGACTG 58 NA Mus musculus 50 Prpf31 ENSMUSG00000008373 ENSMUST00000108636 1 1 3 127 7 3587936 3587954 TGACATTGTGCAGTCTCTG 59 3588348 3590263 GCTCAATCTCATCCTTCCC 59 NA Mus musculus 50 Vdac3 ENSMUSG00000008892 ENSMUST00000009036 2 1 2 178 8 23694207 23698041 AGTCTTGTAGTGGAGTGGA 59 23692599 23694066 TTCAGCCAACTTATTCTCCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Kcnq1 ENSMUSG00000009545 ENSMUST00000105918 3 1 2 104 7 150334712 150335420 GCTTCCTCATTGTTCTGGT 59 150335488 150368647 CAAGGACAATCTCCATCCA 58 NA Mus musculus 50 Tbrg1 ENSMUSG00000011114 ENSMUST00000011258 3 1 2 85 9 37460256 37460274 TATGCTAGCATGAAGTGCC 59 37458962 37460208 ACAATTTCAAACTGAGGCTG 58 NA Mus musculus 50 Myl2 ENSMUSG00000013936 ENSMUST00000014080,ENSMUST00000111751 2 2 3 112 5 122554865 122554884 GCATTCAAGGTGTTTGATCC 59 122555041 122556693 AACATCTGGTCGATCTCCT 59 NA Mus musculus 50 Gip ENSMUSG00000014351 ENSMUST00000103157,ENSMUST00000103156 2 2 2 100 11 95887999 95888017 ATCAGTGATTACAGCATCG 57 95888081 95890014 ATGTTGTGTTTCCAGTCAC 58 NA Mus musculus 50 Chrne ENSMUSG00000014609 ENSMUST00000014753,ENSMUST00000102556,ENSMUST00000108552 3 3 3 81 11 70432301 70432319 TTAGGAGACCTGAGGACAC 59 70432155 70432259 GTTTCTTCTTTCTCGTTCAGTG 59 NA Mus musculus 50 Adam28 ENSMUSG00000014725 ENSMUST00000089195 3 1 3 60 14 69272387 69272406 GAAGCTGAAGAACTACTTGG 58 69272346 69272367 TCCTGATAAGTTACTTCCTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Acsf3 ENSMUSG00000015016 ENSMUST00000098337 1 1 2 95 8 125307993 125314499 AAGAATCAGGTTCTGTGGG 59 125314558 125314576 CTGCATGGATGATGTAGGG 59 NA Mus musculus 50 Cdc6 ENSMUSG00000017499 ENSMUST00000092706,ENSMUST00000093937 2 2 2 92 11 98775314 98776406 GATCGACTTAGTCAGGTGTC 59 98776461 98776479 GATGTCTCCTGAAACAGCA 59 NA Mus musculus 50 Stk4 ENSMUSG00000018209 ENSMUST00000088291 1 1 3 171 2 163936020 163943718 GAGACGAAGAGATGAGACC 58 163943851 163977417 GCTCTTGAGAAACTCATAGTC 58 NA Mus musculus 50 Trpv2 ENSMUSG00000018507 ENSMUST00000018651,ENSMUST00000102643 1 2 2 80 11 62405784 62406259 CTTTGAAATCCTCTTCCTTGTC 59 62406300 62406318 AGGTACCATTCAGTCTCCA 59 NA Mus musculus 50 2810408A11Rik ENSMUSG00000018570 ENSMUST00000100969,ENSMUST00000018714 2 2 4 128 11 69711804 69711823 AAAGGAAGGTATCTGAGGTC 58 69710984 69711612 CAAGCTTTCATCTGGAGTG 58 NA Mus musculus 50 Ikzf1 ENSMUSG00000018654 ENSMUST00000078183 2 1 9 191 11 11590389 11600225 GTTGATAACCTGAAGACAATGG 59 11607902 11648327 TTTAACATTACTGGCCATGC 58 NA Mus musculus 50 Arrb1 ENSMUSG00000018909 ENSMUST00000098266,ENSMUST00000032995 1 2 2 80 7 106739843 106739861 GAGACTACCAGACAGTTCC 58 106739904 106741028 TCCGTGGTAATAGATCTCCT 59 NA Mus musculus 50 Lhx9 ENSMUSG00000019230 ENSMUST00000093486,ENSMUST00000019374,ENSMUST00000112030 3 3 5 95 1 140729340 140729358 TTGCTATCAACCATAACCC 57 140725272 140729281 CCAAGATTTGTTCTCCCTG 58 NA Mus musculus 50 Akt3 ENSMUSG00000019699 ENSMUST00000019843,ENSMUST00000111159,ENSMUST00000111160 3 3 3 81 1 178973985 178980178 CAAATAAACGCCTTGGTGG 59 178973922 178973940 TCTTGCCAGTTTACTCCAG 59 NA Mus musculus 50 Zwint ENSMUSG00000019923 ENSMUST00000020081,ENSMUST00000105431 2 2 2 160 10 72118811 72118993 AGTTTATGAGGAACTCGCG 59 72119284 72119303 CTCCTTAGTTTCAGTTGCCT 59 NA Mus musculus 50 Sgcd ENSMUSG00000020354 ENSMUST00000020613 2 1 4 225 11 46946177 47168694 TCACAATTGGTAATGCCCT 59 46896344 46939045 CCTTCAGCTCCTAAGACTC 58 NA DesignRelaxed Mus musculus 50 Rock2 ENSMUSG00000020580 ENSMUST00000020904,ENSMUST00000116446 3 2 2 80 12 16979636 16979794 AAATGCAGGCTCAAATAGC 58 16979837 16979856 CAATGTCGCTGTCTTTACTG 59 NA Mus musculus 50 Mfsd11 ENSMUSG00000020818 ENSMUST00000106365,ENSMUST00000021173,ENSMUST00000106363 2 3 3 85 11 116734685 116735104 TTTGTTCAGTCAATCTGCG 58 116735152 116735171 AATATCACCATGACCAGGAG 58 NA Mus musculus 50 Alox8 ENSMUSG00000020891 ENSMUST00000021262,ENSMUST00000094078 3 2 2 81 11 69005144 69010540 CAGAAGATGTACAGCTGGA 58 69005081 69005099 TGAGGTCCAAGTCTTTCAC 59 NA Mus musculus 50 9330134C04Rik ENSMUSG00000021470 ENSMUST00000021926,ENSMUST00000095724,ENSMUST00000109778,ENSMUST00000067821 3 4 7 81 13 63936090 63942745 CTTAACAGTTTGGAATGGTCAG 59 63942787 63942805 TAACTTCTGTAACTCGGGC 59 NA Mus musculus 50 Pde8b ENSMUSG00000021684 ENSMUST00000067093 3 1 3 98 13 95822878 95853079 GTAACAAGCAGATTCACCG 58 95819914 95819932 CAATGGACTCTTTCCTCCT 58 NA Mus musculus 50 Nudt13 ENSMUSG00000021809 ENSMUST00000074699 1 1 2 71 14 21125556 21125574 ATCTAGGTCTGAAGAGTGC 58 21126475 21126493 CTTTACAGCAGTCAAGCTG 58 NA DesignNoJunction Mus musculus 50 1700049K14Rik ENSMUSG00000021966 ENSMUST00000111173,ENSMUST00000022537 3 2 2 73 14 64728477 64728495 GAGTGGTGGGTTCTATCTG 59 64729477 64729495 GTGCCATGAATGATCTCCA 59 NA DesignNoJunction Mus musculus 50 4930449E01Rik ENSMUSG00000022116 ENSMUST00000022711 2 1 1 140 14 105904558 105904576 ATCCCTGTAAGAAGCAAGC 59 105904775 105904794 TAAGTTCTGCTTCCTTCCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Mbnl2 ENSMUSG00000022139 ENSMUST00000088418,ENSMUST00000088419,ENSMUST00000022738 2 3 3 103 14 120784803 120788130 ATAAACTGGAGGTATGCAGG 59 120788196 120788214 GTTTGTGTCGATCATGGTG 59 NA Mus musculus 50 Ttc33 ENSMUSG00000022151 ENSMUST00000022751 2 1 2 83 15 5139796 5158379 AACAAACGATACAAGGAGG 57 5158425 5158444 TTTCATCTCATAAAGGGTGG 57 NA Mus musculus 50 1810015C04Rik ENSMUSG00000022270 ENSMUST00000022881,ENSMUST00000110438,ENSMUST00000110439,ENSMUST00000110435 3 4 4 85 15 25899608 25899865 GTCCTAAGATTAGCCTCACAG 59 25899912 25899930 CCCATTGTCAGTCCAAGAG 59 NA Mus musculus 50 Ywhaz ENSMUSG00000022285 ENSMUST00000022894,ENSMUST00000110362,ENSMUST00000110361 3 3 4 99 15 36706071 36706089 GCAACCAGAAAGCAAAGTC 59 36705324 36706010 GTCCACAATTCCTTTCTTGTC 59 NA Nonspecific Mus musculus 50 Trp63 ENSMUSG00000022510 ENSMUST00000115308,ENSMUST00000115305 3 2 6 84 16 25871212 25876724 CAGAAACATCTCCTTTCAGC 58 25876769 25876789 TAAAGAAGACGTCAGACTGTG 59 NA Mus musculus 50 Pvrl3 ENSMUSG00000022656 ENSMUST00000023335,ENSMUST00000096052 3 2 3 86 16 46436540 46438050 GACAAAGTAATCGACCTTCC 58 46436473 46436491 AAGAAGGTCTTTCTGAGGG 58 NA Mus musculus 50 Usp25 ENSMUSG00000022867 ENSMUST00000023580 2 1 2 80 16 77081914 77083998 ACAGTTCCTAATACAAGAGGAG 58 77084039 77084057 CTCAAGTCTGGAGGTAAGG 58 NA Mus musculus 50 App ENSMUSG00000022892 ENSMUST00000074271 3 1 3 104 16 85030602 85040505 CCTGATAAACTTCCCACGA 58 85030516 85030534 TTTGGCTTTCTGGAAATGG 58 NA Mus musculus 50 Tulp2 ENSMUSG00000023467 ENSMUST00000107762,ENSMUST00000024233 3 2 5 81 7 52769565 52770034 GAAGAAAGAGACCCTGGAG 58 52770788 52770808 CTTCTTCTCAAATAGCTGTCG 58 NA Nonspecific Mus musculus 50 Synj2 ENSMUSG00000023805 ENSMUST00000080283,ENSMUST00000115789,ENSMUST00000115785 3 3 7 116 17 6035452 6035470 CAAGGGTCTTCTAAGCCAG 59 6035550 6037392 TAACATGGGCTTTCCTGTC 59 NA Nonspecific Mus musculus 50 Crip3 ENSMUSG00000023968 ENSMUST00000024764 2 1 2 152 17 46567951 46567969 GTCTTTGGGCAGAAATTGG 59 46568177 46568340 CCAATGTTCACACCTTTGG 59 NA Mus musculus 50 Mapk8ip3 ENSMUSG00000024163 ENSMUST00000115229,ENSMUST00000088345,ENSMUST00000115228 1 3 3 80 17 25041757 25041863 CATCTGGCAGTTCTTTAGTC 58 25041696 25041714 ATGTTCACAGATGGGTAGG 58 NA Mus musculus 50 Cuta ENSMUSG00000024194 ENSMUST00000114935,ENSMUST00000025027,ENSMUST00000114931 3 3 3 110 17 27075112 27075371 GTTTGTTCGATCTGTGCAC 59 27075020 27075038 GAAACCGATTCTGTGACCT 59 NA InUTR Mus musculus 50 Htatip ENSMUSG00000024926 ENSMUST00000025865,ENSMUST00000113641,ENSMUST00000113640 1 3 4 80 19 5603977 5605379 TGAGTTCAGCTATGAACTCTC 59 5603917 5603935 GATAGGAGGCCAAGATCTG 58 NA Mus musculus 50 Maged2 ENSMUSG00000025268 ENSMUST00000112700,ENSMUST00000112699,ENSMUST00000026302,ENSMUST00000112697,ENSMUST00000112702 2 5 5 80 X 147243793 147243811 AATGGAAATCGGTCCAGTG 59 147243311 147243656 GAGTGAGTGATGAATCCCAG 59 NA Mus musculus 50 Hdhd2 ENSMUSG00000025421 ENSMUST00000097522,ENSMUST00000026485,ENSMUST00000097521 2 3 4 81 18 77193854 77193874 GAAACTTAATCGAGCAGAAGC 59 77193916 77195587 GTTTGAACTCCTGTGAACTC 58 NA Mus musculus 50 2010106E10Rik ENSMUSG00000025528 ENSMUST00000026602 2 1 2 86 X 109628822 109628841 TCGACCTCAACATAATTCTG 57 109628889 109669875 GATAAGCTCCATGGATTCTC 57 NA Mus musculus 50 D11Bwg0517e ENSMUSG00000025576 ENSMUST00000106279,ENSMUST00000069343 1 2 5 103 11 118362933 118365041 GCTCCAAGGTCAATAATGC 58 118358520 118358539 ATAGACTGTTCCTACCACAG 58 NA Mus musculus 50 Als2 ENSMUSG00000026024 ENSMUST00000027178,ENSMUST00000114254 1 2 2 80 1 59240676 59240694 CCCTGAACAAAGAAGACCA 59 59240162 59240632 CAGAGGCATAGCTGTAGAC 59 NA Mus musculus 50 Atp2b4 ENSMUSG00000026463 ENSMUST00000112269,ENSMUST00000048953 1 2 5 80 1 135603565 135611643 GATTCAGACTCAGATCAGAGTC 59 135603506 135603524 ATGGAGCTACGATTCTTGG 59 NA Mus musculus 50 Golga1 ENSMUSG00000026754 ENSMUST00000039165 3 1 2 88 2 38911638 38911656 CAGCTCCAGAGAAGATCTC 58 38908539 38911588 GTTCAGCATAGTCAGAAAGTC 58 NA Mus musculus 50 Odf2 ENSMUSG00000026790 ENSMUST00000113759 1 1 13 80 2 29759620 29768096 GCAAAGAGAAGGATTCCGA 59 29768140 29768158 CTTTCTCTGAGTCTGCCTC 59 NA Mus musculus 50 Gpsm1 ENSMUSG00000026930 ENSMUST00000066936,ENSMUST00000078616,ENSMUST00000114135,ENSMUST00000066889,ENSMUST00000114134 2 5 6 86 2 26200870 26202335 CAAATACCAGTCCTCCAGG 59 26202385 26202403 AAATCCTCATCAGGCATGG 59 NA Mus musculus 50 Atf2 ENSMUSG00000027104 ENSMUST00000055833,ENSMUST00000112017,ENSMUST00000112016,ENSMUST00000100009 1 4 10 87 2 73689031 73691861 ATTGTGGCTGATCAGACTC 59 73688962 73688980 CAAATGGACTTGCCAACTC 59 NA Mus musculus 50 Ttc17 ENSMUSG00000027194 ENSMUST00000111238,ENSMUST00000111237,ENSMUST00000055081 1 3 4 81 2 94164567 94164585 GGACCACTTACATGGAGTG 59 94163315 94164523 AAGATTCTGCAGTACCTCTG 59 NA Mus musculus 50 4930525F21Rik ENSMUSG00000027209 ENSMUST00000110446,ENSMUST00000110448 3 2 4 138 2 125809491 125811999 ATAAACAACGTGTTGAGGC 58 125809371 125809390 TCTTCCACATTGTTGAAGTC 58 NA Mus musculus 50 D230010M03Rik ENSMUSG00000027243 ENSMUST00000090608 1 1 3 60 2 91552983 91553001 CAGTTTGAAACTGGGATGC 59 91560513 91560531 GGAGAAAGAAGGAACTGTC 57 NA DesignNoJunction Mus musculus 50 Arhgap1 ENSMUSG00000027247 ENSMUST00000111329,ENSMUST00000111331,ENSMUST00000070873,ENSMUST00000090614,ENSMUST00000111330 3 5 5 123 2 91510715 91510875 TTCCTGGTGCAGATATCTG 58 91510962 91510980 GATTGATAGCCTTGAGGGT 58 NA Mus musculus 50 Snap25 ENSMUSG00000027273 ENSMUST00000028727,ENSMUST00000110098 2 2 2 141 2 136595596 136599649 AGCTTAAATCCAGTGATGCT 59 136599753 136603086 GCATCATTTGTTACCCTGC 59 NA Mus musculus 50 Nsfl1c ENSMUSG00000027455 ENSMUST00000089140,ENSMUST00000028949 1 2 3 80 2 151328906 151329855 TAAACCGAGACCATTTGCA 59 151329899 151329917 CTTTCTCCTGCCACATAGG 59 NA Nonspecific Mus musculus 50 Cstf1 ENSMUSG00000027498 ENSMUST00000029000,ENSMUST00000116375 3 2 2 96 2 172201332 172201350 TTGATAGCCACAGGATCTG 58 172201407 172201564 CATTCATCATGACCTCAATTGG 59 NA Mus musculus 50 Atp9a ENSMUSG00000027546 ENSMUST00000109177,ENSMUST00000109176,ENSMUST00000109171,ENSMUST00000029060,ENSMUST00000109175,ENSMUST00000109170 3 6 6 84 2 168463196 168464579 ATCTATCAAGGGAGCACCA 59 168463130 168463148 ATGTGAAGGAGATTGCCAC 59 NA Nonspecific Mus musculus 50 2610304G08Rik ENSMUSG00000027651 ENSMUST00000109517,ENSMUST00000109519,ENSMUST00000029180,ENSMUST00000103123,ENSMUST00000099135,ENSMUST00000109518 3 6 6 92 2 157873688 157873706 AGCAGATACAAGAGGAGGA 59 157873759 157875838 TGATTAACTCCTCAGTCAAGAG 59 NA Mus musculus 50 Tpm3 ENSMUSG00000027940 ENSMUST00000029550 1 1 3 85 3 89892970 89892988 TAAGTGTTCTGAGCTGGAG 58 89893037 89893728 TTTGAGAGTACTTCTCCGC 59 NA Mus musculus 50 Ndst3 ENSMUSG00000027977 ENSMUST00000106420,ENSMUST00000029602 1 2 4 92 3 123309944 123330889 AAAGTTTGCCTTAGAGCAC 58 123309870 123309888 TAAAGCTGAACATGGACAG 57 NA Mus musculus 50 Fubp1 ENSMUSG00000028034 ENSMUST00000079497 3 1 2 95 3 151877020 151877795 TAGAAGATGGAGATGGCTC 57 151878558 151878576 CTTTCTTAGCATCTGGCTG 58 NA Mus musculus 50 Ccnc ENSMUSG00000028252 ENSMUST00000051664,ENSMUST00000102997,ENSMUST00000029916 3 3 5 152 4 21673552 21673573 AGAACTTTCTGTGGATATGGAG 59 21673912 21675292 TCACCTTCACTGTTTGGAG 59 NA Mus musculus 50 Col15a1 ENSMUSG00000028339 ENSMUST00000102917,ENSMUST00000082303,ENSMUST00000107732,ENSMUST00000107731 1 4 6 100 4 47306106 47306241 GTTAACATCAAAGGCGCTG 59 47308975 47308993 TGGAAAGTGACAAGCTCTG 59 NA Mus musculus 50 Rod1 ENSMUSG00000028382 ENSMUST00000030076,ENSMUST00000107535,ENSMUST00000102883 3 3 3 80 4 59489879 59490037 AAGTTCTTCCAGAAAGACCG 59 59489818 59489836 AAGCTCAATAAGAGCCTGG 59 NA Mus musculus 50 Epb4.1l4b ENSMUSG00000028434 ENSMUST00000095076 3 1 3 89 4 57045109 57051389 ATCAACATCAACAAGGCTG 58 57045038 57045056 CTTCACATGATCTGCTACG 57 NA Mus musculus 50 Pde4b ENSMUSG00000028525 ENSMUST00000106911,ENSMUST00000030251,ENSMUST00000106908,ENSMUST00000106904,ENSMUST00000097950,ENSMUST00000097949 3 6 9 123 4 102275266 102275284 CGATCGTATCATGGAGGAG 59 102275371 102277593 GTCAATGAAACCAACCTGG 58 NA Mus musculus 50 Nasp ENSMUSG00000028693 ENSMUST00000030456,ENSMUST00000106474,ENSMUST00000030457,ENSMUST00000081182 3 4 4 92 4 116276830 116276849 TTGGCCTATGGTTACAACTC 59 116276656 116276775 ATGGAGTACAGCCATTCTC 58 NA Mus musculus 50 Pomgnt1 ENSMUSG00000028700 ENSMUST00000106498,ENSMUST00000106496,ENSMUST00000079561,ENSMUST00000079267,ENSMUST00000106494 3 5 5 81 4 115824470 115824488 AAGTTGATCCTGGACACTC 58 115824533 115824693 CTAGGGCCTCATCATAGTC 58 NA Mus musculus 50 Wasf2 ENSMUSG00000028868 ENSMUST00000084241,ENSMUST00000097853,ENSMUST00000105912 3 3 3 83 4 132741011 132741526 AGAAGAAGTGTCACTACAAGG 59 132741570 132741589 TTCCTGTCAAAGAGCTTCTG 59 NA Mus musculus 50 Trspap1 ENSMUSG00000028898 ENSMUST00000030730,ENSMUST00000105959 2 2 5 81 4 131877643 131877664 GAGTTCTTTGTCAAAGTCTACC 58 131875479 131877601 AACCATAGCCCTTAGACAC 58 NA Mus musculus 50 Mthfr ENSMUSG00000029009 ENSMUST00000097788,ENSMUST00000069604 2 2 2 82 4 147422361 147425484 ATCTTCCCTATTCAGGGCT 59 147425529 147425548 ACATCCTTGATCTTCTGTGG 59 NA Mus musculus 50 Ccnl2 ENSMUSG00000029068 ENSMUST00000030944,ENSMUST00000030945,ENSMUST00000116250 2 3 3 87 4 155189397 155189418 GAACCAGATTATAAAGGCAGAG 58 155189463 155192043 CATAACGATTATCTTGTGAGGG 58 NA Mus musculus 50 Slc4a1ap ENSMUSG00000029141 ENSMUST00000031023,ENSMUST00000114533 1 2 2 84 5 31834882 31834900 AGGAAGCAATGGTACAGTG 59 31834948 31836427 TTCCGAGATACTGCTTCCT 59 NA Mus musculus 50 Hnrpdl ENSMUSG00000029328 ENSMUST00000086900,ENSMUST00000031271 3 2 2 217 5 100466639 100466657 TCTTTGTGGGTGGATTGAG 59 100465981 100466108 AACTTTGATTTCGCACTTCC 59 NA DesignRelaxed Mus musculus 50 Jtv1 ENSMUSG00000029610 ENSMUST00000100483,ENSMUST00000031613 1 2 2 149 5 144665658 144667428 TGCTTGGAAAGGACTATGG 59 144665527 144665547 CATTCTTGACAGACGAATGTG 59 NA Mus musculus 50 4930434E21Rik ENSMUSG00000029658 ENSMUST00000110502 3 1 3 142 5 150408954 150414081 CATGGCAGACTACTGTCAG 59 150414187 150414205 CCAGGAACAGACAGATCTG 59 NA Mus musculus 50 Aldoa ENSMUSG00000030695 ENSMUST00000106348,ENSMUST00000032934,ENSMUST00000087566 1 3 3 139 7 133939632 133939742 GTTACTGAGAAGGTCCTGG 58 133939511 133939529 ATGGCAATCTCCTCATTGG 59 NA Mus musculus 50 Cln3 ENSMUSG00000030720 ENSMUST00000084589,ENSMUST00000032962,ENSMUST00000116269,ENSMUST00000106380,ENSMUST00000098036 3 5 5 94 7 133718860 133718881 GAATACTTTATCAACCAGGGAC 58 133718587 133718721 TATAGCATCTGGTACCATCG 58 NA Mus musculus 50 St5 ENSMUSG00000031024 ENSMUST00000079282,ENSMUST00000077909,ENSMUST00000084738 1 3 3 80 7 116681852 116682459 AGAATACAGCAGTGAAACCT 58 116681791 116681809 AGTAAGCGCCTACAATAGC 59 NA Mus musculus 50 Cul4b ENSMUSG00000031095 ENSMUST00000050083 2 1 3 83 X 35904890 35905569 CAGTTCAGAGAAGATTCATTGG 59 35904114 35904847 TATCATTTGCCTACAGTGGT 58 NA Mus musculus 50 Slc25a14 ENSMUSG00000031105 ENSMUST00000114936 1 1 4 105 X 45977371 45982434 GATTGTAAGCGGACATCAG 58 45982503 45982521 GAACTCGGCAACAATAGAG 58 NA Mus musculus 50 Arhgef7 ENSMUSG00000031511 ENSMUST00000033908,ENSMUST00000110909,ENSMUST00000110914,ENSMUST00000110911,ENSMUST00000110910 2 5 7 193 8 11728406 11758438 CCATCGAGAAAGTCTACCC 59 11781232 11782535 TAGTCCAATGTCTGCTGTC 58 NA Mus musculus 50 Adam3 ENSMUSG00000031553 ENSMUST00000069723,ENSMUST00000033958 2 2 2 81 8 25791905 25791924 ACAGACCAGAACTTCATGAC 59 25791216 25791864 CTGGTATTGATCGGTAGTAAGG 59 NA Mus musculus 50 Plekha2 ENSMUSG00000031557 ENSMUST00000064883,ENSMUST00000098866 3 2 2 85 8 26170436 26172855 AAGATCACTGTACCCAAAGC 59 26170370 26170388 TTCTTCTCTAGGGTGGGAG 59 NA Mus musculus 50 Irx3 ENSMUSG00000031734 ENSMUST00000093312,ENSMUST00000095002 2 2 2 71 8 94323325 94323343 TACTCAAGACAGCTTTCCA 58 94322838 94322856 CTGATAAGACCAGAGCAGC 59 NA DesignNoJunction Mus musculus 50 Spata19 ENSMUSG00000031991 ENSMUST00000034473,ENSMUST00000067581 3 2 2 80 9 27205592 27207998 TTATAAGATGGAGCCACACC 59 27208040 27208059 CTTGATCTATTCGTTCCTGC 58 NA Mus musculus 50 Cadm1 ENSMUSG00000032076 ENSMUST00000114547 1 1 5 161 9 47626892 47656259 TCATCACAGATTCTCGAGC 59 47656381 47658375 CTTCATGAGTGAAGTATGTACC 58 NA Mus musculus 50 Ldlr ENSMUSG00000032193 ENSMUST00000034713,ENSMUST00000070068 3 2 2 80 9 21551684 21551702 CTACCAGAAGACCACAGAG 58 21551746 21552598 CTGACCATCTGTCTTGAGG 59 NA Mus musculus 50 Arpp21 ENSMUSG00000032503 ENSMUST00000035085 2 1 6 164 9 112051867 112060203 AGACAATCAGTCAGTTTGCT 59 112045926 112045944 TTGGAACTGTCCGAATCTG 59 NA Mus musculus 50 Lmo2 ENSMUSG00000032698 ENSMUST00000111143,ENSMUST00000111140,ENSMUST00000040619 1 3 4 112 2 103816331 103816349 CTCTACTACAAGCTGGGAC 58 103821079 103821097 ATCGTCATCTCATAGGCAC 58 NA DesignNoJunction Mus musculus 50 Tbc1d4 ENSMUSG00000033083 ENSMUST00000041648 1 1 4 80 14 101874317 101874337 CAGAATTCAGGTAGACTGTCC 59 101868692 101870652 ACTCTTGTTATCCCTTGACTC 59 NA Mus musculus 50 Tbc1d4 ENSMUSG00000033083 ENSMUST00000110796 2 1 4 80 14 101874318 101874338 TCAGAATTCAGGTAGACTGTC 58 101864970 101870652 CCTTCTCCATCACTTGACTC 59 NA Mus musculus 50 Cdc14b ENSMUSG00000033102 ENSMUST00000039318,ENSMUST00000109770,ENSMUST00000109769 2 3 3 80 13 64317566 64317584 CTGGATAATACCAGAGCGA 58 64317023 64317522 GAATGTTGGTGGTAACCAC 58 NA Mus musculus 50 D030074E01Rik ENSMUSG00000033382 ENSMUST00000097658 2 1 2 80 18 21024698 21026269 AAGTCAAAGTAGATGGCCT 58 21024636 21024654 TATTGTTAGGAGGGTCACC 57 NA Mus musculus 50 Acbd6 ENSMUSG00000033701 ENSMUST00000035560 1 1 3 84 1 157448657 157463006 AAACAATCAGGGAAGAAGAC 57 157463053 157463071 TTCGATTTGATGGCTTTGG 58 NA Mus musculus 50 6720456B07Rik ENSMUSG00000033940 ENSMUST00000035725 2 1 1 68 6 113565803 113565821 ATGAGAAATTGACAGCCCT 58 113566059 113566077 GAGTCTCACCCTTTGTCAC 59 NA DesignNoJunction Mus musculus 50 Spata6 ENSMUSG00000034401 ENSMUST00000038868,ENSMUST00000106579,ENSMUST00000084354 1 3 4 80 4 111457436 111471682 CAAGGACTACAAGGTTATCAG 57 111471724 111471742 GGGCTCAAATATTCCTCAC 57 NA Mus musculus 50 C630004H02Rik ENSMUSG00000034586 ENSMUST00000044152,ENSMUST00000106542,ENSMUST00000106541 2 3 3 90 11 115217732 115217948 ATGGATGATGCTGATCCTC 58 115216730 115216748 TGAGGATGAACTGGAAGTC 58 NA Mus musculus 50 Mon2 ENSMUSG00000034602 ENSMUST00000073792 2 1 2 80 10 122459999 122460979 GCCATCTACTTGAGAAGGT 58 122459937 122459955 TAATGAGTGACGTCAAAGC 57 NA Mus musculus 50 Cd300a ENSMUSG00000034652 ENSMUST00000106582 2 1 2 116 11 114754801 114754819 ATGCAGACACCTACATGTG 59 114754899 114755980 GAGATGAAACTGGGTCCTC 59 NA Mus musculus 50 Cobll1 ENSMUSG00000034903 ENSMUST00000112431,ENSMUST00000112430,ENSMUST00000090896,ENSMUST00000072921,ENSMUST00000112422,ENSMUST00000112432 3 6 9 80 2 64940177 64940197 ATATAGGCAATGAGGACAGAG 58 64937441 64940136 TTTGAACTACACTCTCCTGG 58 NA Nonspecific Mus musculus 50 Map2k2 ENSMUSG00000035027 ENSMUST00000048223 1 1 3 117 10 80582340 80582358 GATGCCAAGGAACTAGAGG 59 80582439 80583796 CATGACCTACACTGATGGG 59 NA Mus musculus 50 Mbnl3 ENSMUSG00000036109 ENSMUST00000114876,ENSMUST00000114875,ENSMUST00000041495 3 3 3 81 X 48484794 48492395 CAGATGTCATCTCTTGCGT 59 48484731 48484752 GAGTCATGTAAGGATTGAAAGC 59 NA Mus musculus 50 Tm6sf2 ENSMUSG00000036151 ENSMUST00000049197 3 1 2 145 8 72601404 72601794 CCCTGACATGGAAGAACAG 59 72602228 72602248 TATAGATGAAGCAGGCATCTG 59 NA Mus musculus 50 6430550H21Rik ENSMUSG00000036502 ENSMUST00000089056 3 1 3 98 X 35550466 35561196 TGACTTTCAGGTATTCTCGT 58 35550387 35550405 GTTTCTTGAACCATTGCAG 57 NA Mus musculus 50 Sbf1 ENSMUSG00000036529 ENSMUST00000081421 3 1 2 107 15 89138001 89138019 ATCTATGCTATCCACGTGG 58 89137355 89137930 AGAGATGGTTCTCTGAGAC 57 NA Mus musculus 50 Zcchc12 ENSMUSG00000036699 ENSMUST00000048067,ENSMUST00000115256,ENSMUST00000115258 2 3 4 133 X 33736551 33736780 TTGTAGAGCTGGTCTTGAG 58 33736876 33736895 TGGGAAACTGGAGTATTTCC 59 NA InUTR Mus musculus 50 4933433C11Rik ENSMUSG00000036770 ENSMUST00000043774,ENSMUST00000114363 1 2 2 119 2 25069779 25069797 ATGAGTCCACACCTATCAG 58 25069585 25069603 GAGACATATTGGGCACCTC 59 NA DesignNoJunction Mus musculus 50 Slc39a12 ENSMUSG00000036949 ENSMUST00000114731 1 1 2 107 2 14355972 14365646 CAAATACCAAGAAAGGCCC 58 14371404 14371423 TCATAATGGCCAATAAGCTG 58 NA Mus musculus 50 Slc39a12 ENSMUSG00000036949 ENSMUST00000082290 3 1 2 107 2 14355970 14357291 ACCAAATACCAAGGGTCTG 59 14357362 14357380 GAGATAGACTTGCCTCCAC 59 NA Mus musculus 50 4932438A13Rik ENSMUSG00000037270 ENSMUST00000099134 3 1 3 91 3 36921316 36921334 GGAGAAACTGATGAGCTCC 59 36921387 36925163 CCATCTTCTGATGTATCCTGG 59 NA Mus musculus 50 Lphn3 ENSMUSG00000037605 ENSMUST00000113424 1 1 4 82 5 82170161 82189660 GACAATATCAAGTCATGGGT 57 82189704 82189723 ATATACATGAGTCCAAAGGC 57 NA Mus musculus 50 Mynn ENSMUSG00000037730 ENSMUST00000047495 3 1 2 165 3 30510390 30510408 TTGTGATAGATGTGGGCAG 59 30510537 30512487 AAATGGTCGTTCTCCTGTG 59 NA Mus musculus 50 Polr3k ENSMUSG00000038628 ENSMUST00000039551 1 1 1 67 2 181600720 181600738 AATGTGGACTCTACTGCAG 58 181602939 181602957 TGAAGCTGCATGAAGTAGG 59 NA DesignNoJunction Mus musculus 50 Tgfb2 ENSMUSG00000039239 ENSMUST00000045288,ENSMUST00000085692 1 2 2 80 1 188452909 188454502 GCCTACTGCTTTAGAAATGTG 59 188452849 188452867 TTTCCATCCAAGATCCCTC 58 NA Mus musculus 50 Shprh ENSMUSG00000039282 ENSMUST00000092703 3 1 3 110 10 10926974 10926992 CTATCATTGAAGCCACCCA 59 10927063 10927630 CTCTAATACTCTTGGTCTGTCC 59 NA Mus musculus 50 Rbms3 ENSMUSG00000039607 ENSMUST00000044901,ENSMUST00000111773,ENSMUST00000111772,ENSMUST00000068962,ENSMUST00000069095,ENSMUST00000084824 3 6 6 129 9 117019120 117019139 TATACATCCGAGGACTTCCA 59 116868668 116965864 AAACCATAACCTTTGCACTG 58 NA Mus musculus 50 Flywch1 ENSMUSG00000040097 ENSMUST00000045517,ENSMUST00000115465,ENSMUST00000086325 2 3 3 84 17 23897214 23897232 AGGATTGGAGACTCTGAGG 59 23893755 23893773 GGTCTTTAGGAACTCAGGC 59 NA DesignNoJunction Mus musculus 50 Akap9 ENSMUSG00000040407 ENSMUST00000088917 2 1 2 134 5 3951725 3954405 TAGCTCGGAGATTAATGGC 58 3954844 3954862 ATCTGAAGACAGGTCTGAC 58 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000075269,ENSMUST00000111372,ENSMUST00000111371,ENSMUST00000111369,ENSMUST00000111375,ENSMUST00000111373,ENSMUST00000111381,ENSMUST00000049326 3 8 17 137 2 90994906 90995705 TAGGCAAAGAACGTTCTACC 59 90994684 90994806 CTAGGGAGAGGTACCTGTC 59 NA Mus musculus 50 Tiprl ENSMUSG00000040843 ENSMUST00000043235 2 1 1 60 1 167150246 167150266 GCTCATCAGAATGAATGACAC 59 167147953 167147973 TCGTAACATGTAGGTCTTGTC 59 NA DesignNoJunction Mus musculus 50 Rnpep ENSMUSG00000041926 ENSMUST00000077340 3 1 2 91 1 137168999 137169017 CCAAGGAGGAATACAGTGG 59 137168329 137168944 GAGCAAGTCATACCTTCCC 59 NA Mus musculus 50 Osbpl6 ENSMUSG00000042359 ENSMUST00000111929,ENSMUST00000077972,ENSMUST00000090784 3 3 5 97 2 76394026 76398247 AAATACAGCTCCAGGAAGG 58 76398308 76402849 GAAAGGAACTGTTGTAGCC 58 NA Mus musculus 50 Smtnl2 ENSMUSG00000045667 ENSMUST00000108500,ENSMUST00000050226,ENSMUST00000054338 3 3 3 69 11 72213859 72213878 AAACAGATCCTGCTAGAGTG 59 72213506 72213524 AGAAATTCTGCAGGTCCAC 59 NA DesignNoJunction Mus musculus 50 Zfp295 ENSMUSG00000046962 ENSMUST00000113734,ENSMUST00000052089 2 2 3 152 16 98174248 98177930 CTTGCCAGATAAAGTGCAG 58 98174114 98174133 TATGAGCTCGGAATTTCTGG 59 NA Mus musculus 50 Atg16l2 ENSMUSG00000047767 ENSMUST00000084897 3 1 2 168 7 108444712 108444730 AGATGGGACGAAAGAAGAG 58 108442489 108443381 TTTCTTGAAGTCCAACAGC 58 NA Mus musculus 50 Pygo2 ENSMUSG00000047824 ENSMUST00000060061,ENSMUST00000107414,ENSMUST00000107413 1 3 3 104 3 89236697 89236715 TGAACTTTCCCAGTCAACC 59 89236783 89236801 AGATCATGGGACCAAATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 D930020E02Rik ENSMUSG00000047977 ENSMUST00000059362 3 1 1 226 14 69911184 69911204 TAAACTCATCCTGAGTCTTCC 58 69910827 69910845 AAAGGACGAAACAGAGGAC 59 NA DesignNoJunction, InUTR Mus musculus 50 6530418L21Rik ENSMUSG00000048458 ENSMUST00000066610,ENSMUST00000098273 3 2 2 61 3 105519797 105519815 TCCATTGAACCCAAAGGAG 59 105519840 105519858 GTTAGGGCAAACTTACGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rtbdn ENSMUSG00000048617 ENSMUST00000067472,ENSMUST00000109740 3 2 2 120 8 87476813 87476831 TGTGAATTCTTCCTGGGAC 59 87476915 87478916 AGGTGGTGAACCAAATCTG 59 NA Mus musculus 50 Frmd3 ENSMUSG00000049122 ENSMUST00000056548,ENSMUST00000084474,ENSMUST00000098006 1 3 3 80 4 73807955 73807975 GTAAAGTTGCTAAAGAGGTGG 58 73808014 73816555 GAGTAATGTTGACTCTATGCAC 58 NA Mus musculus 50 Mapk14 ENSMUSG00000053436 ENSMUST00000004990 1 1 6 80 17 28865912 28877636 GTACAGACCATATTAACCAGC 58 28877678 28877696 TTGGCATCCTGTTAATGAG 57 NA Mus musculus 50 Fbxl11 ENSMUSG00000054611 ENSMUST00000075856,ENSMUST00000116571 3 2 2 80 19 4320200 4320218 TCCTCCAACCTACTAACTG 57 4319268 4320156 CAATTTATTGCAACCTGCC 57 NA Nonspecific Mus musculus 50 Klhl18 ENSMUSG00000054792 ENSMUST00000068025,ENSMUST00000084956,ENSMUST00000111934 2 3 3 151 9 110334944 110334962 AGACCTACTCACCTGAGAC 59 110331507 110332453 GTTGTAGTGTTCCACACTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Lair1 ENSMUSG00000055541 ENSMUST00000086401,ENSMUST00000108600 1 2 6 80 7 4014680 4014699 ACTTCATCCAGTTATCCTGC 59 3980623 4007522 ATATCAGGCAGAGAACCCT 59 NA Mus musculus 50 Myh8 ENSMUSG00000055775 ENSMUST00000019625,ENSMUST00000108686 2 2 4 81 11 67106409 67106427 TATAACAAGAACCCAGGCG 59 67106471 67107868 GATGGATTCTCTTCTCAGCA 59 NA Mus musculus 50 Mta3 ENSMUSG00000055817 ENSMUST00000112349 1 1 6 92 17 84181295 84181313 TACTGACAGATACGTGCAG 58 84183669 84188269 TTTGGTTTGCTGTAAGTCG 58 NA Mus musculus 50 9330182L06Rik ENSMUSG00000056004 ENSMUST00000115343,ENSMUST00000069538 3 2 3 82 5 9427797 9427817 CCCAGGATTCTATAACAATGG 57 9427861 9428413 ACTTGCATTCCTTTGTTCC 58 NA Mus musculus 50 Prss2 ENSMUSG00000057163 ENSMUST00000070380 1 1 1 127 6 41472885 41472903 ATCAGGTGTCCCTAAATGC 59 41473872 41473890 ATTGATGTTGTGCTCTCCC 59 NA DesignNoJunction Mus musculus 50 Arhgap24 ENSMUSG00000057315 ENSMUST00000094559,ENSMUST00000112855,ENSMUST00000112854,ENSMUST00000073302,ENSMUST00000112853,ENSMUST00000112852,ENSMUST00000070000,ENSMUST00000112849 2 8 8 80 5 103304838 103307469 GAAGAAGCAGGTGTTAAGG 58 103307512 103307531 GCAAATGTACTTCAGAAGGT 58 NA Mus musculus 50 Olfr1446 ENSMUSG00000057817 ENSMUST00000112929,ENSMUST00000081236 1 2 2 60 19 12964544 12964562 CTTCTGCAAGTCCAATGTG 59 12964502 12964520 GAGAGCCATTATTGCAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Frem1 ENSMUSG00000059049 ENSMUST00000107230 1 1 2 104 4 82637473 82638719 GTTCATTTACTCAGCATGCC 59 82637388 82637406 TGACAGACACTGTGAACTG 59 NA Mus musculus 50 Bcas3 ENSMUSG00000059439 ENSMUST00000100679 1 1 12 107 11 85174554 85179061 GTAACAAGGAGGCTTACAG 57 85184560 85184579 ATTCTAGATTCCGTGATGTG 57 NA Mus musculus 50 Serpinb12 ENSMUSG00000059956 ENSMUST00000081277,ENSMUST00000112724 3 2 3 82 1 108850338 108850356 TTACTTCAAGGCCAAGTGG 59 108850400 108851908 TCTTCTCGTTCTCATTGAGAC 59 NA Mus musculus 50 Caln1 ENSMUSG00000060371 ENSMUST00000086029,ENSMUST00000111287,ENSMUST00000111288 2 3 3 82 5 130981989 130982007 CTCAACCGATCTCTGTCTG 59 130982053 131093725 GCTTCTCGGATTTCATCCA 59 NA Mus musculus 50 Ppm1b ENSMUSG00000061130 ENSMUST00000112307 1 1 5 201 17 85402715 85404262 GGGTTGAAGAAATCATGCAG 59 85423040 85423058 ATAGACGTGCTCAAGTCTG 59 NA DesignRelaxed Mus musculus 50 Kalrn ENSMUSG00000061751 ENSMUST00000089655,ENSMUST00000114960,ENSMUST00000114957,ENSMUST00000114954,ENSMUST00000114948,ENSMUST00000114953 3 6 13 166 16 34153587 34171371 TGGAAAGTGACAAGGATGG 59 34153439 34153458 ATAGAGTTGGGTGATTGGAG 58 NA InUTR Mus musculus 50 Kalrn ENSMUSG00000061751 ENSMUST00000076810,ENSMUST00000074924,ENSMUST00000114968,ENSMUST00000114961,ENSMUST00000089655,ENSMUST00000114960,ENSMUST00000114957 3 7 13 100 16 34314435 34332217 ACTCCATGAATGCCTATGTC 59 34314354 34314372 GGAGATCTGCTTGATTTGC 58 NA Mus musculus 50 Ssbp3 ENSMUSG00000061887 ENSMUST00000030367,ENSMUST00000097934,ENSMUST00000072753,ENSMUST00000106761 1 4 5 128 4 106585572 106585820 TTATCAGAGATTCGATGGGA 57 106588288 106588307 TGAATGTTCACAAGTGTCTC 58 NA Mus musculus 50 Brpf3 ENSMUSG00000063952 ENSMUST00000004985 3 1 3 98 17 28954659 28954677 AACATCGGCTATGATCCTG 59 28954739 28955294 AAGGATGTTGTCCACATCC 59 NA Mus musculus 50 Slco1a5 ENSMUSG00000063975 ENSMUST00000081380,ENSMUST00000111825,ENSMUST00000111822 3 3 3 128 6 142214913 142214931 ACTCGTGAGTTACTTTGGA 58 142211234 142214822 GTTTCATATTCGTATCGGCC 58 NA Mus musculus 50 Tacc1 ENSMUSG00000065954 ENSMUST00000084030 3 1 2 101 8 26288458 26292304 GTTTAATAACGAGCGGCTG 59 26285707 26285726 CTGAGATCTTCGAGATCACG 59 NA Mus musculus 50 Olfr1513 ENSMUSG00000068385 ENSMUST00000111545,ENSMUST00000089739 1 2 2 70 14 52969633 52969651 GAGGACATTCCTGTTTGTG 58 52969581 52969599 TCAGGATGATCATGTTCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Trpc2 ENSMUSG00000070425 ENSMUST00000106950,ENSMUST00000106949,ENSMUST00000094129,ENSMUST00000094130,ENSMUST00000084843,ENSMUST00000106951 1 6 8 114 7 109226432 109227256 GCTTAACCAGAACTCTACAG 57 109227519 109227537 TGAAATTTCCTTGGTGCTC 58 NA Mus musculus 50 Pramel4 ENSMUSG00000073724 ENSMUST00000105761,ENSMUST00000105760 1 2 6 60 4 143655908 143655926 GCCTTGATTTGCTGATGTC 59 143656451 143656469 TCAAGCACTTGTAGGTTCC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Tmem16c ENSMUSG00000074968 ENSMUST00000099623,ENSMUST00000111019,ENSMUST00000099622 3 3 3 87 2 110601652 110601670 AGGCATCTGTTGTATGAGC 59 110597213 110601602 TCTCACCAAAGTACATCCTG 59 NA Mus musculus 50 Sepx1 ENSMUSG00000075705 ENSMUST00000115262,ENSMUST00000101800 2 2 2 90 17 24877059 24877077 ACGAGTTCCTGAATGATGG 59 24877131 24878860 GCTTCTTTGCCTTTAGGGA 59 NA Mus musculus 50 IGKV4-81 ENSMUSG00000076539 ENSMUST00000103340 3 1 1 144 6 68940900 68940919 GCACTTCTACCAAATTCTGG 58 68940775 68940793 TGGCAGTAATAAGTGGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mtcp1 ENSMUSG00000079529 ENSMUST00000114084,ENSMUST00000033543,ENSMUST00000114083 1 3 3 60 X 72650542 72654888 CAAGCCAACAACTATTTGGA 58 72650501 72650520 AACACTTACGAAGTTCTTGG 58 NA DesignNoJunction Mus musculus 50 Ttc7 ENSMUSG00000036918 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-345 ENSMUSG00000065429 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-715 ENSMUSG00000076004 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Sept1 ENSMUSG00000000486 ENSMUST00000000497,ENSMUST00000106314 1 2 2 126 7 134361729 134361922 TGGACAAGGAATATGTGGG 58 134361538 134361556 TTGATGAGGGTGGATTTCC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Il4 ENSMUSG00000000869 ENSMUST00000000889 3 1 1 81 11 53426150 53427418 CCTGGATTCATCGATAAGC 57 53426087 53426105 GATGCTCTTTAGGCTTTCC 58 NA Mus musculus 50 Timp1 ENSMUSG00000001131 ENSMUST00000009530,ENSMUST00000115342 2 2 2 83 X 20448218 20448236 GATAGCTTCCAGTAAGGCC 59 20448283 20449915 TTAGCCCTTATGACCAGGT 59 NA Mus musculus 50 2610209M04Rik ENSMUSG00000001158 ENSMUST00000001186,ENSMUST00000113683 2 2 2 114 6 86630970 86631592 GATCACTGAGGAAGACCTG 59 86626254 86626272 ATTTACAGAGCCGTCTACC 58 NA Mus musculus 50 Rac1 ENSMUSG00000001847 ENSMUST00000100489,ENSMUST00000080537 1 2 2 110 5 144275555 144275573 TTATGACAGATTGCGTCCC 59 144268344 144268971 TCAGGATACCACTTTGCAC 59 NA Mus musculus 50 Rmnd5a ENSMUSG00000002222 ENSMUST00000002292 1 1 1 80 6 71344762 71346855 CGAATTACCTATTGAAGTGGAC 58 71344703 71344721 GTTTGCTGACGAAGAATGG 59 NA Mus musculus 50 Uck1 ENSMUSG00000002550 ENSMUST00000002625,ENSMUST00000113405 2 2 2 189 2 32113860 32113878 TTCTACACCCAGGAGATCC 59 32112174 32113615 CGTACTTCTTAGTCGGCAG 59 NA Mus musculus 50 Plag1 ENSMUSG00000003282 ENSMUST00000003369 1 1 1 91 4 3832085 3832602 ATTACAAAGGCACATGGCT 59 3832012 3832030 TCTTCAGATGGTCTTTCCG 58 NA Mus musculus 50 Zfp81 ENSMUSG00000003929 ENSMUST00000114412 2 1 3 95 17 33471645 33471663 CTTCTCAGCTTCTGATCCA 58 33471564 33471586 ATGTAACAGGCACATAGGT 58 NA Mus musculus 50 Pde1c ENSMUSG00000004347 ENSMUST00000044505,ENSMUST00000114327,ENSMUST00000101372 2 3 3 80 6 56092164 56100603 AGTTCTTTAGACAGGGTGAC 58 56092103 56092122 CAACCATGGTTGACTTTCTG 59 NA Mus musculus 50 Psg17 ENSMUSG00000004540 ENSMUST00000004655 2 1 1 126 7 19404268 19405261 CTTCAGGTGTACTCCTCTC 58 19404160 19404179 CTGGTAGATTGTGAACAAGG 58 NA Mus musculus 50 Sgce ENSMUSG00000004631 ENSMUST00000115579,ENSMUST00000115577,ENSMUST00000101677 1 3 4 131 6 4641502 4641520 GATTTCCTCGTTACCCTGG 59 4639755 4640474 GACAAGCTGGATATCTGGG 59 NA Mus musculus 50 Zp3 ENSMUSG00000004948 ENSMUST00000005073 3 1 1 86 5 136463202 136463345 CAAGACTTCCCAGAGTTGG 59 136463392 136463413 GAGCTTGAATTACTACAGTTGC 59 NA Mus musculus 50 Asf1b ENSMUSG00000005470 ENSMUST00000005607 3 1 1 82 8 86489028 86491734 CATATGTTCGTCTTTCAGGC 58 86491779 86491797 ATGAGAACCACAGTCACAC 59 NA DesignNoJunction Mus musculus 50 Ndufs3 ENSMUSG00000005510 ENSMUST00000005647 2 1 1 68 2 90738582 90738600 GATTATGGCTTCGAGGGAC 59 90735026 90738551 GTAACGAAGCTCAACATAGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Spo11 ENSMUSG00000005883 ENSMUST00000109125,ENSMUST00000050442,ENSMUST00000109126 1 3 3 80 2 172809541 172809560 GATGATACCTCAGTGTACCA 58 172809603 172810388 ACTTTCAGAATCAGAGCGA 58 NA Mus musculus 50 Clic1 ENSMUSG00000007041 ENSMUST00000007257 1 1 1 86 17 35190076 35192183 TCAATGACAACCTAGAGAAGG 59 35192231 35192249 CATCCACTTCTTCTGGGAG 59 NA Mus musculus 50 Stx1a ENSMUSG00000007207 ENSMUST00000005509 1 1 1 83 5 135517108 135517126 GACAAAGGAGGAACTGGAG 59 135517173 135517810 TGCTCAATGCTCTTTAGCT 59 NA Mus musculus 50 Pcdha1 ENSMUSG00000007440 ENSMUST00000047479 1 1 9 205 18 37306121 37306139 CCAAAGTAGGCACAGTACC 59 37318983 37319001 TTGCACTGGATACTGTTGG 59 NA DesignNoJunction Mus musculus 50 Ap2s1 ENSMUSG00000008036 ENSMUST00000086112,ENSMUST00000108497 2 2 2 134 7 17328569 17328588 TCCGATTCATCCTTATCCAG 58 17328715 17332625 TCTTGAAGTTCCGGAACTC 59 NA Mus musculus 50 ENSMUSG00000009116 ENSMUSG00000009116 ENSMUST00000009260 2 1 1 77 10 75905735 75905753 GAGGACTTACATACCAGCG 59 75905794 75905812 AAACGACTTTGGCAAAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pou6f1 ENSMUSG00000009739 ENSMUST00000073837,ENSMUST00000108918,ENSMUST00000058274 3 3 3 143 15 100410422 100410441 CAACTTAGAAGAGATCCGGG 59 100409041 100410316 TTCTCAAACCTGCAGATGG 59 NA Mus musculus 50 Adam19 ENSMUSG00000011256 ENSMUST00000011400,ENSMUST00000101315 3 2 3 85 11 45953205 45953223 AGGGTATCTCAGAGTGGTG 59 45953272 45953518 GTGTTAGTCACCTTTCGCT 59 NA Mus musculus 50 Adam28 ENSMUSG00000014725 ENSMUST00000089195 2 1 3 60 14 69273719 69273738 TGGAGTCTTCTGGTAGTCTC 59 69272455 69273697 GATGAGAAGAACGACTTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mapkapk2 ENSMUSG00000016528 ENSMUST00000016672 1 1 1 81 1 132952582 132953000 TCAGAAGAAGTGAAGATGCT 58 132952520 132952540 GGTTCATGAATTCTGTGATGG 59 NA Mus musculus 50 Slpi ENSMUSG00000017002 ENSMUST00000109367 3 1 1 78 2 164181195 164181213 TGAATCCTGTTCCCATTCG 59 164180710 164180728 AGCATCATACATCTTGCCT 58 NA DesignNoJunction Mus musculus 50 Zpbp2 ENSMUSG00000017195 ENSMUST00000081033 3 1 5 80 11 98415286 98416807 TTTCTGGTCTTTGTGAATCC 58 98416850 98416868 ATTCGTGATGTCTTCACAG 57 NA Mus musculus 50 Rab5a ENSMUSG00000017831 ENSMUST00000017975 2 1 1 190 17 53636995 53637723 ACAAATGAGGAATCCTTTGC 58 53639741 53639759 GTCTTAGCTGATGTCTCCA 58 NA Mus musculus 50 Cxcl16 ENSMUSG00000018920 ENSMUST00000019064 1 1 1 80 11 70272319 70272539 CTTTATCAGGTTCCAGTTGC 58 70272258 70272276 AAGCAGTCCACTAGTTCAC 59 NA Mus musculus 50 Slfn3 ENSMUSG00000018986 ENSMUST00000019130 1 1 1 107 11 83027061 83027079 GTGAAGAGGTTTACCACAG 57 83028022 83028042 GAATGGTTTCATATAGAGGGC 58 NA DesignNoJunction Mus musculus 50 Krt10 ENSMUSG00000019761 ENSMUST00000103131,ENSMUST00000006961 1 2 2 80 11 99248434 99248558 TGGTTCAATCAGAAGAGCA 58 99248372 99248391 GATTTCAGACTTATGGCTGG 58 NA Mus musculus 50 Fuca2 ENSMUSG00000019810 ENSMUST00000060212 1 1 1 80 10 13222997 13223015 CCAGTGGGCAGATATTCTC 59 13223058 13225557 CACATTGTAAAGCCTTCGTG 59 NA Mus musculus 50 Hebp2 ENSMUSG00000019853 ENSMUST00000020000 2 1 1 205 10 18265001 18265500 GCCAGGAAGTTATGAGATCC 59 18264183 18264202 ACTCACTGAAAGGACTTGAG 59 NA DesignNoJunction Mus musculus 50 Epyc ENSMUSG00000019936 ENSMUST00000020094,ENSMUST00000105285 2 2 2 80 10 97112428 97112447 TGTATGATGCCATCTTGGAG 59 97112488 97133141 CTTTCTCGTTCTCTACATGGT 59 NA Mus musculus 50 Med23 ENSMUSG00000019984 ENSMUST00000092646,ENSMUST00000020159 2 2 2 80 10 24628585 24628604 CTATACGTTAGCTCTAGCCC 58 24628647 24629615 TCAGTGAGAAACTTTGGGA 58 NA Mus musculus 50 Rufy2 ENSMUSG00000020070 ENSMUST00000092458,ENSMUST00000062600,ENSMUST00000020264 2 3 3 81 10 62457502 62458061 CTAAACAGACAACTCAACAGC 59 62458103 62458122 CGATCAGCTTAGTGTTTGAC 58 NA Mus musculus 50 Slc16a7 ENSMUSG00000020102 ENSMUST00000063318,ENSMUST00000105257 2 2 2 82 10 124670542 124670563 GAATGATCTTGGCTTCTTACAG 59 124668444 124670501 GAATGCTAATCCTAAACCTCC 58 NA Mus musculus 50 6230410P16Rik ENSMUSG00000020258 ENSMUST00000036382,ENSMUST00000112543 1 2 2 140 9 106058847 106058865 GAGAAACAGATGCTCACCA 59 106058424 106058744 GATGAGGCTTATCACCTGAG 59 NA Nonspecific Mus musculus 50 Nudcd2 ENSMUSG00000020328 ENSMUST00000020578 3 1 1 164 11 40547551 40547569 GTTCATTGAAGTCCAGGTG 58 40549560 40550004 TTTCTGTCCTCCAAAGTCC 59 NA Mus musculus 50 Mgat1 ENSMUSG00000020346 ENSMUST00000101293 3 1 3 183 11 49065168 49074082 GTTCTTCAGGTACATGGCT 59 49074229 49074247 CACAAAGATGATAGCACCC 58 NA DesignRelaxed, InUTR Mus musculus 50 Igfbp1 ENSMUSG00000020429 ENSMUST00000020704 1 1 1 93 11 7099907 7100775 CTCAAGAAATGGAAGGAGC 58 7100831 7100850 TGTAGATTTCATCTCCTGCT 58 NA Mus musculus 50 Zkscan17 ENSMUSG00000020472 ENSMUST00000101150,ENSMUST00000013262 2 2 2 125 11 59316517 59316535 AACAAGAACGAATGTCAGC 58 59313111 59316428 CATCTTGCGGAACTAAGTC 58 NA Mus musculus 50 Ggnbp2 ENSMUSG00000020530 ENSMUST00000108081,ENSMUST00000100685,ENSMUST00000100686 2 3 3 60 11 84653669 84653773 AGAGCTTTGAGATGACTGTG 59 84653628 84653646 TCACAAAGTTGTTCCAAGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Prkar1a ENSMUSG00000020612 ENSMUST00000106677,ENSMUST00000020932,ENSMUST00000106676,ENSMUST00000049527 2 4 4 137 11 109521470 109522356 CCTACGTTAGAAAGGTTATTCC 58 109522615 109522633 AGGAGACTGGAAACATAGC 58 NA Mus musculus 50 BC029169 ENSMUSG00000020614 ENSMUST00000020938 1 1 1 80 11 109539759 109544165 GTTCAAACCCATGAGACAG 58 109539697 109539716 GCATTGTGTCTCTGAAAGTC 59 NA Mus musculus 50 Kif3c ENSMUSG00000020668 ENSMUST00000020999 1 1 1 86 12 3388181 3388199 AAGAAACCATGGAGCTACG 59 3388249 3389632 TGGCATAGAGCTTCTTGAG 59 NA Mus musculus 50 Ppp2r3c ENSMUSG00000021022 ENSMUST00000021410 2 1 1 80 12 56399495 56399891 TTTATTACAGGTTGCCAGC 57 56399433 56399451 TCCTCTGTAGAAAGACAGC 58 NA Mus musculus 50 Esr2 ENSMUSG00000021055 ENSMUST00000110421,ENSMUST00000101291,ENSMUST00000076634,ENSMUST00000110420,ENSMUST00000110419,ENSMUST00000110418 3 6 6 91 12 77224195 77224214 GAAGAGTGGAATCTCTTCCC 59 77222893 77224141 TGCCCTTGTTACTGATGTG 59 NA Mus musculus 50 Gpld1 ENSMUSG00000021340 ENSMUST00000021773,ENSMUST00000110370 3 2 2 80 13 25071549 25071569 GTATGTCTACTATGGTTCCCA 58 25071611 25071720 TTACAGTAGGTGTCCTTGC 58 NA Mus musculus 50 Msx2 ENSMUSG00000021469 ENSMUST00000021922 3 1 1 72 13 53563601 53563619 CTTCCATAGACCTGTGCTC 59 53563547 53563565 ATGGTACATGCCATATCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Slmap ENSMUSG00000021870 ENSMUST00000102956,ENSMUST00000112331,ENSMUST00000100800,ENSMUST00000038522,ENSMUST00000100798,ENSMUST00000090359,ENSMUST00000112330 1 7 7 80 14 27285099 27285118 AGAAGTTAGCCACACTTCAG 59 27284743 27285058 CTTCATCTATTAAAGCCTGCC 58 NA Mus musculus 50 Anxa8 ENSMUSG00000021950 ENSMUST00000022519 3 1 1 80 14 34905741 34905761 TCATTGAGATCCTAGCTTCTC 58 34905802 34906578 GGGTAGATCCATAGTCTTCC 58 NA Mus musculus 50 Rpl24 ENSMUSG00000022601 ENSMUST00000114450,ENSMUST00000023269 3 2 2 96 16 55967200 55967218 GAGTCAGCATTCCTTTCCA 59 55967277 55969635 TTTGAATTTCTTCCGACTGC 59 NA Nonspecific Mus musculus 50 Senp5 ENSMUSG00000022772 ENSMUST00000023457 2 1 1 113 16 31983615 31983633 GCTGGATATGGACGATCTG 59 31977833 31983357 AAGAAGTGGACCTTGTCTG 59 NA Mus musculus 50 Abcc5 ENSMUSG00000022822 ENSMUST00000096199,ENSMUST00000115547 3 2 3 194 16 20404780 20405474 TGAACAGCAGAAGACTAGAG 58 20402374 20402393 ATTCTGACCGCAGAATACAG 59 NA DesignRelaxed Mus musculus 50 Aqp2 ENSMUSG00000023013 ENSMUST00000023752 3 1 1 82 15 99412604 99413541 CCTCCTTGGGATCTATTTCAC 59 99413585 99413603 CATCAAACTTGCCAGTGAC 59 NA Mus musculus 50 Efhb ENSMUSG00000023931 ENSMUST00000024725 1 1 1 80 17 53552985 53561209 CTATGACAAGAAGGGAGATGG 59 53552925 53552943 TTGTCTAGATGCAGGTTGG 59 NA Mus musculus 50 Adcyap1 ENSMUSG00000024256 ENSMUST00000064775 1 1 1 60 17 93599455 93601582 GATCAGACCAGAAGACGAG 59 93601606 93601624 GTCATAGAAGTCTTGCAGC 58 NA DesignNoJunction Mus musculus 50 Tap2 ENSMUSG00000024339 ENSMUST00000025197 3 1 1 160 17 34349291 34350965 ACAATATGTCCGGAACCTG 59 34351089 34351107 AGACGTCTTGGAATTCCAC 59 NA Mus musculus 50 Dpysl3 ENSMUSG00000024501 ENSMUST00000091917,ENSMUST00000025379 3 2 2 85 18 43513607 43514407 CCAACACAGAGCTCTATGAG 59 43513541 43513561 AATGATATCTCCATTCTCGGC 59 NA Mus musculus 50 Camk2a ENSMUSG00000024617 ENSMUST00000102888,ENSMUST00000102887,ENSMUST00000115295 1 3 3 91 18 61137660 61139722 AGTCCTACACGAAGATGTG 58 61139777 61139795 GAATCGATGAAAGTCCAGG 57 NA Nonspecific Mus musculus 50 Arl2 ENSMUSG00000024944 ENSMUST00000025893 3 1 1 88 19 6137784 6137802 AGTTCAATGGAGAAGACGT 58 6137625 6137732 GATGTTCAGCTTGAATCCG 58 NA Mus musculus 50 Tsr2 ENSMUSG00000025264 ENSMUST00000112683,ENSMUST00000026295 2 2 2 91 X 147524950 147525158 AAGAAATGGAGGTGACAGC 59 147524877 147524895 AATAGTCTGGGTGTCTGGA 59 NA Mus musculus 50 Mettl7b ENSMUSG00000025347 ENSMUST00000026398 2 1 1 60 10 128397666 128397685 GAGAAGTTCCTGACAAAGAG 57 128397625 128397644 CAATGAAGCGCTCATATTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Si ENSMUSG00000025359 ENSMUST00000054125 2 1 1 83 10 128154850 128154868 TGTGAAGAGACAAGTTCCC 59 128154914 128155123 TCAATACCCTGGACAATGTC 59 NA Mus musculus 50 4930412O13Rik ENSMUSG00000025783 ENSMUST00000114919 2 1 2 150 2 9804642 9804661 GTTGAAGCAATTAGCGAGAG 59 9804774 9804792 ATGATCAAGGAACCCAACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Paqr8 ENSMUSG00000025931 ENSMUST00000068880 3 1 1 113 1 20922219 20922237 CATGGTTCATCTCACACCT 59 20922311 20924674 CAGTTAGACAACCTTTGTAGAG 58 NA InUTR Mus musculus 50 Rhbdd1 ENSMUSG00000026142 ENSMUST00000027322 3 1 1 88 1 82374204 82374222 TATGATGTCTACACAGCGG 58 82374274 82439450 TTTCTGGTATTTCCTCGGT 58 NA Mus musculus 50 2810459M11Rik ENSMUSG00000026227 ENSMUST00000027429 2 1 1 90 1 87945199 87945217 TACTGACTTGCTTCTCCTG 58 87945271 87949537 AACTGGAGGTGTTCTTGAG 59 NA DesignRelaxed Mus musculus 50 Dtymk ENSMUSG00000026281 ENSMUST00000027503,ENSMUST00000112894,ENSMUST00000112890 3 3 3 70 1 95697470 95698276 CGAAAGATCAACGGAAATCG 59 95697419 95697437 AGTGATCCTCTAGTTCCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc45a3 ENSMUSG00000026435 ENSMUST00000065693,ENSMUST00000027695 3 2 2 142 1 133874764 133875332 ACTATGATGAAGGCATTCGA 58 133875437 133875455 AGGAAAGGTCATCACACTG 59 NA Mus musculus 50 Cubn ENSMUSG00000026726 ENSMUST00000091436 3 1 1 80 2 13407726 13407745 TGTACTTTATGCTGGAACAC 57 13400815 13407683 CAGTCACATCTGAAACTCC 57 NA Mus musculus 50 4930562F07Rik ENSMUSG00000026729 ENSMUST00000028061 1 1 1 229 1 162007605 162007922 AGTCTTCTGTCTTAGGGCA 59 162005339 162005357 GGATCAGACACGAAAGAGG 59 NA DesignNoJunction Mus musculus 50 2310003F16Rik ENSMUSG00000027245 ENSMUST00000110612,ENSMUST00000028677 1 2 2 96 2 121283771 121283897 GAGTTGATAATGACGGAAATGG 59 121283954 121283972 TTAGGGCAATAAGAGCCTC 58 NA Mus musculus 50 Dusp2 ENSMUSG00000027368 ENSMUST00000028846 1 1 1 89 2 127163125 127163144 CCATTACAAGAGCATTCCAG 58 127163196 127163326 TTCACCGAGTCTATGAAGC 59 NA Mus musculus 50 Mal ENSMUSG00000027375 ENSMUST00000028854 1 1 2 257 2 127466114 127481784 GTGAGTTTGTCTTTGGAGG 58 127464369 127464387 CAAACATTGAGATGGTGGC 59 NA DesignNoJunction Mus musculus 50 Lime1 ENSMUSG00000027582 ENSMUST00000116366,ENSMUST00000108806,ENSMUST00000108805,ENSMUST00000048077 3 4 8 142 2 181117740 181117758 CAGCTGACCATTAGTTGTG 58 181117863 181117979 GAGTATAGGACGTCCATCTG 58 NA Mus musculus 50 Hiat1 ENSMUSG00000027958 ENSMUST00000029570 1 1 1 81 3 116336687 116336705 AAAGAACTGCCAATCACAG 58 116335383 116336642 CAGGGATGATGGAATTCTG 57 NA Mus musculus 50 Ctso ENSMUSG00000028015 ENSMUST00000029649 1 1 1 80 3 81755390 81755408 TAATCCAACATCACTGCTC 57 81755452 81756132 ATGGTGTATTTCCTGTCCT 57 NA Mus musculus 50 Rars2 ENSMUSG00000028292 ENSMUST00000029968,ENSMUST00000108139 3 2 2 80 4 34604102 34604425 CATCTTCTCAGGTTTGATGAG 58 34604467 34604485 AGTTAGGAGGTAGCTAACG 57 NA Mus musculus 50 Pappa ENSMUSG00000028370 ENSMUST00000102859,ENSMUST00000084501 2 2 2 80 4 64984908 64988002 GGCTATGCAATAGGGTCAG 59 64988046 64988064 TGTCAAGTTAACGGGAAGG 59 NA Mus musculus 50 Sh3gl2 ENSMUSG00000028488 ENSMUST00000107188,ENSMUST00000030212 2 2 4 142 4 85025305 85027320 GGAGATGGATATAGAACAGGTG 59 85031704 85031722 TTCTTGGCTGAGATGAAGC 59 NA Mus musculus 50 Slc2a1 ENSMUSG00000028645 ENSMUST00000030398 3 1 1 94 4 118808527 118808858 AGTATGTGGAGCAACTGTG 59 118808915 118808934 CTCAGGGACTTTGAAGTAGG 59 NA Mus musculus 50 Npal3 ENSMUSG00000028803 ENSMUST00000105856,ENSMUST00000063906,ENSMUST00000102549,ENSMUST00000030604 3 4 4 97 4 135030374 135033355 CTTTGTGAGACGCTATGTC 58 135030295 135030313 TCTTCTCATGACTGTTGGG 58 NA Mus musculus 50 Pgd ENSMUSG00000028961 ENSMUST00000084124 3 1 1 91 4 148539219 148539237 CTCCAAACTAAAGAAGCCC 58 148535791 148539167 CCAACAAGGGTACTAATTTCTC 58 NA Mus musculus 50 Camkk2 ENSMUSG00000029471 ENSMUST00000111668,ENSMUST00000047365,ENSMUST00000086224,ENSMUST00000111667 1 4 4 97 5 123198197 123200031 GTACATGGTGTTTGAGTTGG 59 123197984 123198002 GATCCTGGAAGTAGAAGCG 59 NA Mus musculus 50 D630002J15Rik ENSMUSG00000029829 ENSMUST00000031851 1 1 1 142 6 38059537 38059555 CACTTATCCTGCGGTACAG 59 38065585 38065603 TATTCATCTACGGAAGCCC 58 NA DesignNoJunction Mus musculus 50 Slc37a3 ENSMUSG00000029924 ENSMUST00000090243,ENSMUST00000031987 2 2 2 83 6 39297344 39297362 TGAGTAACAACTTCGGGTG 59 39295987 39297298 GAGTCCCACCTATGATACCT 59 NA Mus musculus 50 Clec2d ENSMUSG00000030157 ENSMUST00000032260 3 1 1 82 6 129134891 129135892 GTATAACAACACGATTCCCA 57 129135936 129135955 AATAGATCCTGGTACTGCTG 58 NA Mus musculus 50 Zfp583 ENSMUSG00000030443 ENSMUST00000062765,ENSMUST00000108560 1 2 2 80 7 6275297 6275316 CTCATTACTGGAACAAGGGA 59 6269369 6275254 ACATACTGCCAATCAGGAC 59 NA Mus musculus 50 Bckdk ENSMUSG00000030802 ENSMUST00000071056 3 1 1 63 7 135049670 135049866 CTACATGAAGACAAGCCTG 57 135049893 135049911 TAATCTTCTTGGGCGACAG 59 NA DesignRelaxed Mus musculus 50 Art1 ENSMUSG00000030996 ENSMUST00000033300 1 1 1 93 7 109254872 109255194 GAGTTCAGGTTCAAAGTTACTC 58 109255248 109255266 TACTGGTCATCAAAGGACG 58 NA Mus musculus 50 Ebp ENSMUSG00000031168 ENSMUST00000033509 3 1 1 81 X 7764038 7767217 TTATCCCAACTCTGGAAAGAG 59 7763869 7763887 CAGTCTCCATACAGACGAC 59 NA Mus musculus 50 Itm2a ENSMUSG00000031239 ENSMUST00000033591 1 1 1 80 X 104594213 104594446 GACTTTGAGAAGGGAATGAC 58 104594152 104594171 AACAATGGAAGTATTGAGGG 57 NA Mus musculus 50 Opn1mw ENSMUSG00000031394 ENSMUST00000101457 2 1 2 80 X 71388977 71388995 AGTGCCACTATCTACAACC 58 71389905 71395900 AGATGCAGTTTCGAAACTG 58 NA Mus musculus 50 Tceal6 ENSMUSG00000031409 ENSMUST00000033783 1 1 1 256 X 131745103 131745121 CTGTCCTGGTTACTGTGAG 59 131743978 131743997 GCTTCTCTTCCTCATCTGAC 59 NA DesignNoJunction, InUTR Mus musculus 50 Leprotl1 ENSMUSG00000031513 ENSMUST00000033910 2 1 1 81 8 35202083 35203822 ATATACAACCAATACTGGCC 57 35202021 35202040 CTAATCTTCTGGCTATGCAG 57 NA Mus musculus 50 Dctd ENSMUSG00000031562 ENSMUST00000033966 2 1 2 60 8 49222709 49222727 TAAACTCATCATCCAGGCA 58 49224158 49224176 GTCGTGGTATTTATCCGAC 57 NA DesignNoJunction Mus musculus 50 Zfp821 ENSMUSG00000031728 ENSMUST00000034163 3 1 1 86 8 112246883 112246901 CATTCAGAAGATCAGCGGT 59 112246951 112247879 TTGAGGGAGTTTCTCACTG 58 NA Mus musculus 50 Nfatc3 ENSMUSG00000031902 ENSMUST00000109308,ENSMUST00000034376,ENSMUST00000093190 2 3 3 81 8 108616124 108620074 TCAGCGAGTATTGACTGTG 59 108620118 108620137 TGCCAATATCAGTTTCTCCT 58 NA Mus musculus 50 Panx1 ENSMUSG00000031934 ENSMUST00000056755 3 1 1 91 9 14810653 14811815 GGAGTTCAAAGATTTGGACC 58 14810581 14810599 ATTAGCAGGACGGATTCAG 59 NA Mus musculus 50 Jam3 ENSMUSG00000031990 ENSMUST00000034472 1 1 1 80 9 26906481 26906499 TGATTACGATGGGCATCTG 59 26906341 26906438 GGCTCTTATAGCTTTCTCCA 58 NA Mus musculus 50 St14 ENSMUSG00000031995 ENSMUST00000034478 3 1 1 81 9 30915857 30916165 CACTTCCATTATCGGAATGTG 59 30915796 30915814 ACGCATCCAGAAAGATCTC 59 NA Mus musculus 50 Slc37a2 ENSMUSG00000032122 ENSMUST00000115068,ENSMUST00000034638 3 2 2 81 9 37048920 37048938 GGTCAGACCTGTTAATGAC 57 37048739 37048876 CTTGTAGTCATCTTTGTCGA 57 NA Mus musculus 50 Icam5 ENSMUSG00000032174 ENSMUST00000019616 2 1 1 167 9 20839266 20839493 CTGACTGTTTACAGCTTCC 58 20839623 20839642 AACATTTAACTGGAGCTCAG 57 NA Mus musculus 50 Bmp5 ENSMUSG00000032179 ENSMUST00000012281 2 1 1 82 9 75676006 75687358 ATACACAAACAGGGATGCA 59 75687404 75687422 TATCAAAGACAAGCCAGCC 59 NA Mus musculus 50 Lipc ENSMUSG00000032207 ENSMUST00000034731 1 1 1 97 9 70649950 70649968 CAGACCATCATGCTATGGG 59 70646207 70649889 AATGTCATTCTTTGCTGCG 59 NA Mus musculus 50 Tmem30a ENSMUSG00000032328 ENSMUST00000034878 1 1 1 80 9 79625130 79628357 GTCATTTGAGGGCAATGTG 59 79625068 79625086 TCTCGAGATTTCACGTAGC 59 NA Mus musculus 50 Pccb ENSMUSG00000032527 ENSMUST00000035116 3 1 1 81 9 100930656 100932289 GCTGATAAGAATAAGTTTCCCG 59 100930596 100930617 GACTGAAGACATAAACCAATCG 59 NA Mus musculus 50 Bet1 ENSMUSG00000032757 ENSMUST00000049166 1 1 1 62 6 4032483 4032501 GACTCACTGAAAGTCTGAG 57 4029999 4032459 GGCCTATTTCAATGGAAAGAG 59 NA DesignNoJunction Mus musculus 50 S100b ENSMUSG00000033208 ENSMUST00000036387 3 1 1 94 10 75719909 75722682 TTCCTGGAGGAAATCAAGG 58 75722740 75722758 ATGAACTCCTGGAAGTCAC 58 NA Mus musculus 50 Prrg3 ENSMUSG00000033361 ENSMUST00000048790 1 1 1 121 X 69211184 69211853 CATGGCTGTATTTCTAGAAGC 58 69211936 69211954 AGATCTCTTCCATGCACTC 58 NA InUTR Mus musculus 50 Nudt15 ENSMUSG00000033405 ENSMUST00000043813 3 1 1 98 14 73921471 73923113 AGAATGAAAGTTGGGAGTGG 59 73921392 73921410 ATGGGTCATAACCTTGCTC 59 NA Nonspecific Mus musculus 50 Arhgef5 ENSMUSG00000033542 ENSMUST00000031750 2 1 1 82 6 43235415 43237544 CCTTGAGTGTTATGACTCCC 59 43237589 43237607 CCTTCTCTAGTGCCAACTC 59 NA Mus musculus 50 Scn11a ENSMUSG00000034115 ENSMUST00000070617 1 1 1 80 9 119724414 119725626 GTCCATTCAGTCTTCAGCA 59 119724352 119724373 GTCCACAGAAGAATTATTAGCC 58 NA Mus musculus 50 Usp54 ENSMUSG00000034235 ENSMUST00000035340,ENSMUST00000112526,ENSMUST00000022356 3 3 4 101 14 21371363 21371382 ATCCTAAACTCTACCCTCCC 59 21369668 21371299 CACTCCTTGAAGTTCCTGG 59 NA Mus musculus 50 Dnajc17 ENSMUSG00000034278 ENSMUST00000038439 1 1 1 120 2 119009729 119011440 TGAAACTTGATCTGGAGGC 59 119009406 119009424 GAACCCTCTTCTCGAAGTC 59 NA Mus musculus 50 Utp6 ENSMUSG00000035575 ENSMUST00000108241,ENSMUST00000043152 1 2 2 80 11 79759330 79759348 GAACCATGCTTGCATTCAG 59 79756900 79759286 GCAACAAGTCAATCCACTG 59 NA Mus musculus 50 Trpm8 ENSMUSG00000036251 ENSMUST00000113114,ENSMUST00000040210 2 2 2 80 1 90276378 90276396 TCAAGATCAACACGAAAGC 58 90277569 90281247 GGTCGTTAAGCTTTGAGTC 58 NA Mus musculus 50 Zbtb20 ENSMUSG00000036279 ENSMUST00000033479 1 1 1 94 16 43622591 43622609 GTATTCAGGAACACTTGCG 58 43622667 43622685 TTCTCAAGAGGTCTTCTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lzts1 ENSMUSG00000036306 ENSMUST00000037049 2 1 1 153 8 71662328 71662346 CTAATGAAGGAGCAGGACC 59 71660001 71660019 ATTGGGACTCTTTGAGCTG 59 NA DesignNoJunction Mus musculus 50 Btg1 ENSMUSG00000036478 ENSMUST00000038377 3 1 1 94 10 96080955 96080973 CAGGTTACCGTTGTATTCG 58 96081031 96081049 CCTGAACAACTCCTGACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930549C01Rik ENSMUSG00000036921 ENSMUST00000046647 2 1 1 61 4 136168784 136168802 AATTAATGCTTGCTTCGCC 59 136168826 136168845 TCATCTCACTGAACATCAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem71 ENSMUSG00000036944 ENSMUST00000048372 3 1 1 84 15 66383569 66383588 GCATGGAAGTATCTTTGGAG 58 66373310 66383522 TAGATCACTTCCAAGGCTC 58 NA Mus musculus 50 Trmt12 ENSMUSG00000037085 ENSMUST00000036937 2 1 1 60 15 58704894 58704915 CATCCGGTATAAGTTTGATGTG 59 58704936 58704954 TTTCTCGGTGATGTTTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 D15Ertd621e ENSMUSG00000037119 ENSMUST00000037270 1 1 1 80 15 58274512 58274727 TATATTCCAGGGTTATGATCGG 58 58274768 58274786 GTGAGAACGTTTGAAGCAG 59 NA Mus musculus 50 Tacc3 ENSMUSG00000037313 ENSMUST00000079534,ENSMUST00000114426,ENSMUST00000114422,ENSMUST00000074849 2 4 4 81 5 34003964 34003985 CAGATCATCTGTTCTTTGTCTG 59 34004027 34004181 CTGGAACGTCACATTTGTG 59 NA Mus musculus 50 1700017G19Rik ENSMUSG00000037884 ENSMUST00000035860 1 1 1 128 3 40412023 40412042 GATGTCTGAACGGAGATCTC 59 40407589 40411932 CCTTCCAAACCTGGAAGAG 59 NA InUTR Mus musculus 50 Slc24a2 ENSMUSG00000037996 ENSMUST00000107158,ENSMUST00000064899 1 2 5 99 4 86872856 86872874 GTTCAACGTCCAAGTAGAG 57 86822240 86872793 GAATTCTGAGAGCTTTGCT 57 NA Mus musculus 50 Camk4 ENSMUSG00000038128 ENSMUST00000042868 1 1 1 90 18 33269425 33269446 CTCAAGGAAATATTCGAAACCC 59 33269497 33289428 CCTTCTCCACAATCCTGTC 59 NA Mus musculus 50 Ptov1 ENSMUSG00000038502 ENSMUST00000046575 3 1 1 117 7 52120029 52120139 GAGATCCTGAGAACAGACC 58 52119806 52119824 TGAAGTGGAACTGTACCAG 58 NA Mus musculus 50 Degs1 ENSMUSG00000038633 ENSMUST00000035295 2 1 1 76 1 184209140 184209160 TATCATAACGAGCACCATGAC 59 184207002 184207020 TACTCACTTGCGATCTTCC 59 NA DesignNoJunction Mus musculus 50 Rtel1 ENSMUSG00000038685 ENSMUST00000054622,ENSMUST00000098971,ENSMUST00000048608,ENSMUST00000108815,ENSMUST00000108814 3 5 7 80 2 181069674 181070610 CACAATGTGGAGAAGATATGTG 59 181070649 181070669 GATAATCTCCAGTCCTGAAGC 59 NA Mus musculus 50 Zcchc2 ENSMUSG00000038866 ENSMUST00000112762,ENSMUST00000063190 2 2 2 80 1 107924039 107924057 TACAGCTCTCCGTCTAGTC 59 107924101 107926339 GCTGTCTGAATCTCTGTCC 59 NA Mus musculus 50 Nubp2 ENSMUSG00000039183 ENSMUST00000044252 2 1 1 65 17 25021489 25022371 GAAACATGCACTGATAAAGC 57 25021443 25021461 ACAACCAGATAATCCAGCT 58 NA DesignRelaxed Mus musculus 50 Sec24c ENSMUSG00000039367 ENSMUST00000090462,ENSMUST00000048657 1 2 2 80 14 21512448 21512883 ACATGAAGCTTATCGTGGT 58 21512927 21512945 TTAGGCTCTTGTCTTCCAC 58 NA Mus musculus 50 Morc3 ENSMUSG00000039456 ENSMUST00000044068 2 1 1 80 16 93871434 93871452 GCTTGATGATGTGTTCAGG 58 93871495 93873498 ATTTCCAACAACTGAACCTC 58 NA Mus musculus 50 Slc9a8 ENSMUSG00000039463 ENSMUST00000047815,ENSMUST00000073873,ENSMUST00000109217,ENSMUST00000109218 1 4 4 80 2 167297091 167298941 ACTGAGAAGATGGGTAATGC 59 167298984 167299002 TCTGATGTAGTGAGCTTCG 58 NA Mus musculus 50 Ubn1 ENSMUSG00000039473 ENSMUST00000052449,ENSMUST00000036017 1 2 2 80 16 5062658 5062677 CAGGACTTGATTGATATGGG 57 5062720 5063047 AACAAGTTCATCATACGCC 58 NA Mus musculus 50 Rbms3 ENSMUSG00000039607 ENSMUST00000044901,ENSMUST00000111773,ENSMUST00000111772,ENSMUST00000068962,ENSMUST00000069095 2 5 6 128 9 116868670 116965866 ATCAGTGCAAAGGTTATGGT 59 116731990 116732008 GATTCGTAGGGTCTTGCTC 59 NA Mus musculus 50 Ralyl ENSMUSG00000039717 ENSMUST00000081617 2 1 2 164 3 13777026 13777044 TTCAGTACATGAGTGAGCG 59 14039781 14081218 TTGATTCAAGCCTGTACAGG 59 NA Mus musculus 50 Rbms2 ENSMUSG00000040043 ENSMUST00000099139,ENSMUST00000092033,ENSMUST00000105247,ENSMUST00000076233 1 4 4 191 10 127580603 127582741 ACAAATGGCAAAGCAACAG 59 127575233 127575251 CACTTCTCTGTTGACTCCA 58 NA Mus musculus 50 1700063H04Rik ENSMUSG00000040657 ENSMUST00000043553 2 1 1 60 6 122342231 122342252 CATTATGATCTGGGAGATTGGT 59 122342270 122342291 TTTGTATGAGTGAGTTCTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gtf3c3 ENSMUSG00000041303 ENSMUST00000041638 2 1 1 80 1 54461875 54461893 GATAATCATGCTCTGTGCG 58 54460469 54461831 GACATACTGTCCAAGTGCA 59 NA Mus musculus 50 Thoc6 ENSMUSG00000041319 ENSMUST00000095579,ENSMUST00000047436 1 2 2 80 17 23807323 23807430 GAAATTCTCAAGAAGGGCTG 58 23807181 23807200 ATTGATTTCGGGTACTTCCA 59 NA Nonspecific Mus musculus 50 Slc5a12 ENSMUSG00000041644 ENSMUST00000045972,ENSMUST00000111026 1 2 2 80 2 110484618 110486428 AAACAGAGCAGGATTACCT 58 110486472 110486490 CTTGCTTGAGTCCATTCTG 58 NA Mus musculus 50 Pbrm1 ENSMUSG00000042323 ENSMUST00000112095,ENSMUST00000112094,ENSMUST00000052239,ENSMUST00000112098,ENSMUST00000112089,ENSMUST00000112088,ENSMUST00000112080,ENSMUST00000052467,ENSMUST00000022471,ENSMUST00000022474,ENSMUST00000090214 1 11 11 80 14 31844163 31845598 AAGGCCTACTATAAGCCAG 58 31845641 31845660 CTCATTTCTTGTTCGAAGGT 58 NA Nonspecific Mus musculus 50 2310040C09Rik ENSMUSG00000042377 ENSMUST00000070453 2 1 2 87 11 61498658 61498676 AGAAGCTGAATGTCCACTC 59 61498727 61498745 AACTCAGAAACACTCCAGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 V1re11 ENSMUSG00000043066 ENSMUST00000060374 2 1 1 60 7 10859762 10859782 TCAGGTTTCCAGAAGAAACTC 59 10859722 10859740 CACTAGGGACAGGATTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4933433K01Rik ENSMUSG00000043648 ENSMUST00000051493 2 1 1 68 11 59598577 59598595 TGATTATGGAGGACACCGA 59 59598527 59598545 CAAATTCTTCCCAGATGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Capn13 ENSMUSG00000043705 ENSMUST00000095208 3 1 1 82 17 73715372 73716540 GAATAGCAGGAGACTGCTG 59 73715308 73715326 GTCCATCAGGATCTTCTGC 59 NA Mus musculus 50 Olfr544 ENSMUSG00000043925 ENSMUST00000051201 2 1 1 60 7 109633021 109633039 GAATAAGACGGTGGGACTC 59 109632979 109632998 TAACAGGAGCATATCCAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gimap7 ENSMUSG00000043931 ENSMUST00000052503 1 1 1 60 6 48674143 48674161 TTACACTGACCTACCAGAG 57 48674184 48674203 TTTCCTAAGAGCATACTCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Fmn1 ENSMUSG00000044042 ENSMUST00000110955 1 1 6 117 2 113205947 113205965 GAGAAGATCACAGCTCCAC 59 113319118 113365323 TGAGTTCAAACTGAGCCTG 59 NA Nonspecific Mus musculus 50 A830010M20Rik ENSMUSG00000044060 ENSMUST00000100951,ENSMUST00000060553,ENSMUST00000112672 3 3 4 138 5 107933025 107933532 CAACTGCAGCAGTAAAGTC 59 107934030 107934048 GAAGCACTAAGTCCTTTGC 58 NA Mus musculus 50 Gm444 ENSMUSG00000044576 ENSMUST00000058045,ENSMUST00000114826,ENSMUST00000114824 3 3 3 67 5 30439937 30440466 ATCACCTTCAGTGTCAAGG 59 30440497 30440515 AGTGTGAAGTTGTACACCT 58 NA DesignNoJunction Mus musculus 50 Pigw ENSMUSG00000045140 ENSMUST00000108080,ENSMUST00000067058 2 2 2 60 11 84691387 84691406 AAATCGCTGTATTCTGTCTG 57 84691346 84691365 TTATAATGACCAACCGTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1110012L19Rik ENSMUSG00000045237 ENSMUST00000053981 2 1 1 115 X 67641238 67641256 TGATGAATGGCAGGAAGTG 59 67641332 67642058 TGTCAATAAGTCCAGCTATCAC 59 NA Mus musculus 50 Herc4 ENSMUSG00000045391 ENSMUST00000054837 1 1 1 61 10 62705942 62705963 CGAGGTTAAATTACCCAAACTC 59 62705902 62705920 AGGAACTGTAGCTGTAAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp764 ENSMUSG00000045757 ENSMUST00000059199 3 1 1 115 7 134549167 134549691 AAGTCCACTCAGATTGCAG 59 134549070 134549088 AAATGAGAGTTGTGGCTCC 59 NA Nonspecific Mus musculus 50 Snx12 ENSMUSG00000046032 ENSMUST00000101360,ENSMUST00000077876 2 2 2 80 X 98409851 98410830 GATAGTAAGATCGTAGTACCACC 59 98409793 98409812 AAAGATCCCTTCATCTCCTC 58 NA Mus musculus 50 4930529F22Rik ENSMUSG00000046282 ENSMUST00000056331 2 1 1 60 8 41881453 41881471 AGGCAACCTACAAATCCAG 59 41881495 41881513 ATCACACTGTTCTCCATCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Stxbp6 ENSMUSG00000046314 ENSMUST00000053768 3 1 1 98 12 46120522 46120541 ATCCAAGTCAAGAGAAGGAC 59 46003967 46120461 TTTGTTTGTCACTGACAGG 58 NA Mus musculus 50 Jrk ENSMUSG00000046380 ENSMUST00000050234 1 1 1 60 15 74536821 74536839 CTTTATTAACCCTCCCGTG 57 74536779 74536797 GGCGTCATTTATGTTGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ppm1e ENSMUSG00000046442 ENSMUST00000055438 2 1 1 81 11 87062488 87062506 GATGAAGTCCTCCAGAGTG 59 87057962 87062443 TCTCAATTTCCACAGTCCC 59 NA Mus musculus 50 Pbp2 ENSMUSG00000047104 ENSMUST00000050471 3 1 1 65 6 135259882 135259901 CAAGAAGTATCACCTGGGAG 59 135259836 135259854 ACATAGCTGTCCCATTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cstad ENSMUSG00000047363 ENSMUST00000102853 1 1 1 60 2 30463918 30463936 ATAGTTTCACTGAGAGCCA 57 30463960 30463978 CTTGAACTTGAAAGGCAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 B3gnt1 ENSMUSG00000047379 ENSMUST00000053705 3 1 1 60 19 5039107 5039126 AGTATTTCGAGTTCTTCCCG 59 5039149 5039167 CGGAGTTGAGACTTTACCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr844 ENSMUSG00000049229 ENSMUST00000054106 1 1 1 60 9 19123531 19123550 AATCAAGCTGTCATGTTCTG 58 19123572 19123591 GAAAGTTGCCAAGTATACCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 A230107C01Rik ENSMUSG00000049676 ENSMUST00000085819,ENSMUST00000047846 3 2 3 80 7 29975504 29975522 AACTGGTTCACCTTCACTG 59 29975337 29975461 ATTAATAGTGGGTCCTTGGC 59 NA Mus musculus 50 4933425O20Rik ENSMUSG00000049692 ENSMUST00000055421 2 1 1 137 2 130232475 130232493 GTGGAGTCGGATATCATCG 59 130232594 130232612 TGATGTATTCCACCACTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Txndc14 ENSMUSG00000050043 ENSMUST00000111665,ENSMUST00000053664 1 2 2 83 2 84513755 84515571 AACCATTGATGAGGAGCTG 59 84513690 84513710 GATTGGCAATCATTAGACCAG 59 NA Nonspecific Mus musculus 50 Bpil2 ENSMUSG00000050108 ENSMUST00000105305,ENSMUST00000061699 1 2 2 80 10 85441966 85441985 TAAATCTGCGTCATTTGCTC 58 85440483 85441926 CTGAAATAGTTGGAAATCTCCC 58 NA Mus musculus 50 Defb6 ENSMUSG00000050756 ENSMUST00000063112 3 1 1 63 8 19225524 19225542 TCTTTGCCTTTATCCTGGT 58 19227977 19227996 GGACTGTTGATTAATTGGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 4933403G14Rik ENSMUSG00000050930 ENSMUST00000053078 3 1 1 60 8 128196270 128196288 AAGTGAGTTCTTACGAGCC 59 128196311 128196330 CTGTCATCTATGGCCTTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cbr1 ENSMUSG00000051483 ENSMUST00000039659 1 1 1 200 16 93608494 93609046 TCAAGGTCAATGACGACAC 59 93610108 93610126 TCTCGCTTCGAAACTTCTG 59 NA DesignNoJunction Mus musculus 50 Apon ENSMUSG00000051716 ENSMUST00000060782,ENSMUST00000105239 3 2 2 60 10 127692101 127692122 GGAAAGTATGAATGAAGTAGCC 58 127692142 127692161 CTTGGCGTCTTTAAGTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hbb-y ENSMUSG00000052187 ENSMUST00000033229 1 1 1 93 7 111001324 111001345 AATCTAGACAACCTCAAGTCTG 59 111000507 111001273 TACCCAAGAGTTTGAAGTTCTC 59 NA Mus musculus 50 Junb ENSMUSG00000052837 ENSMUST00000064922 2 1 1 69 8 87502283 87502301 TATCACGACGACTCTTACG 58 87502232 87502250 TGTAGTCGTGTAGAGACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 2810030E01Rik ENSMUSG00000054074 ENSMUST00000091420,ENSMUST00000066885 1 2 2 60 2 17968304 17968323 GATTACATTCCCACACTCTG 57 17968263 17968284 GTTAATTGTCAGGTCAGTTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sh3bp2 ENSMUSG00000054520 ENSMUST00000067638,ENSMUST00000101316 1 2 2 99 5 34895481 34898116 TACAACAGAGTGATGCGAG 59 34898179 34898197 AGAAGAACCATGTTCGGTG 59 NA Mus musculus 50 Srrp ENSMUSG00000054679 ENSMUST00000067864,ENSMUST00000108159 3 2 2 124 4 33313131 33317903 GACAGCCTGAAAGAGTCTC 59 33317990 33318009 GATCCAGAATTCCTTCTCGG 59 NA Mus musculus 50 Centg2 ENSMUSG00000055013 ENSMUST00000027521,ENSMUST00000074945 2 2 2 83 1 91527036 91527054 ATTACTACAGCCGAATGGC 59 91527101 91530749 TGGAACTTATGGCATCCTG 59 NA Mus musculus 50 Gabrg3 ENSMUSG00000055026 ENSMUST00000068394 3 1 2 92 7 64435101 64579029 TCCATAAACATGCTCAGCA 59 64435027 64435045 CAGGTTTGAAGCAATGTCC 59 NA Mus musculus 50 9130017K11Rik ENSMUSG00000055134 ENSMUST00000068548 1 1 1 102 11 67735883 67735901 TAAACAGCGTAGCTAACCC 59 67735967 67735985 TAGTCTTCATCTGGCTTCC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 9330161L09Rik ENSMUSG00000055271 ENSMUST00000056140 3 1 1 61 12 104645525 104645546 TGGACTTGAATACAGTACACAG 59 104645485 104645503 GGACACCACATTTCTTAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp93 ENSMUSG00000055305 ENSMUST00000108438,ENSMUST00000032696 3 2 2 154 7 25056684 25058279 TTACAGGAGATGGTGACCT 59 25059755 25059774 ATCTTATTTGGACTCTGGCA 58 NA DesignNoJunction Mus musculus 50 Gats ENSMUSG00000055397 ENSMUST00000056756 2 1 1 90 5 134619583 134619601 ACAGTATTTGCACGGAGAG 59 134619655 134619673 AGTCTAGAGCTTTGTGGAC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ccl25 ENSMUSG00000055951 ENSMUST00000098949 3 1 2 116 8 4327892 4347730 AATAGGTTCTGGTTTGCCA 59 4347810 4347828 GATCCATGAGCTTCTCAGG 59 NA DesignNoJunction Mus musculus 50 4933421E11Rik ENSMUSG00000056260 ENSMUST00000098751,ENSMUST00000098750,ENSMUST00000106736 1 3 5 81 3 106537518 106537536 AGATGCAAACATTGTGGTG 58 106538346 106538364 ACCCATCTTCATGGTTTCC 59 NA DesignNoJunction Mus musculus 50 Slit3 ENSMUSG00000056427 ENSMUST00000069837 3 1 1 80 11 35408471 35408491 AGCAAGAATCAGATATCGGAC 59 35408533 35412933 GTTCCCATAGAGTACCAGC 59 NA Mus musculus 50 Gpr116 ENSMUSG00000056492 ENSMUST00000113599,ENSMUST00000046665 2 2 2 80 17 43563969 43563988 AGTCATACAGAACCTCAACC 59 43564029 43565409 GTGAATTTCGTCTCATTGCTC 59 NA Mus musculus 50 Ptprn2 ENSMUSG00000056553 ENSMUST00000084823 3 1 2 80 12 117960598 117960618 CTTACCGATATGAGGTACCAC 59 117960659 118011251 TCATGTTATCTGTACGGGAG 58 NA Mus musculus 50 Chd9 ENSMUSG00000056608 ENSMUST00000109614,ENSMUST00000048665 3 2 2 80 8 93520813 93520831 TGAACCCTTAAGGTTTCCA 58 93520875 93520986 AGTTTCTGTACCTGTTCCT 57 NA Mus musculus 50 ENSMUSG00000056743 ENSMUSG00000056743 ENSMUST00000071059 2 1 1 80 6 101490411 101490431 CTTGGGTTTACTCTGTTACTC 57 101490472 101490491 GAGAAGAAAGCATGAATGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Atpbd4 ENSMUSG00000057147 ENSMUST00000102542,ENSMUST00000055144,ENSMUST00000028640 2 3 3 90 2 114473535 114473553 TTACAACATGATGCAGTGC 58 114470637 114473481 TTCATCTGACTCCACTTGG 58 NA Mus musculus 50 Rpl38 ENSMUSG00000057322 ENSMUST00000077915,ENSMUST00000106602,ENSMUST00000106599,ENSMUST00000082092 2 4 4 60 11 114530234 114530252 GGAGATCAAGGACTTTCTG 57 114530275 114533061 CTTGATCTTGACAGACTTGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 NP_001071101.1 ENSMUSG00000057417 ENSMUST00000115428 3 1 1 111 17 24054617 24054940 GACACAAGATTATCATGGTCC 58 24055013 24056013 TCCAACAATCGATCTAGCC 59 NA Mus musculus 50 Mex3b ENSMUSG00000057706 ENSMUST00000082237 3 1 1 126 7 90016363 90016381 AGAAGAGCGTGAACATGAC 59 90016467 90017242 GGAGTAGGAGAAATAGAGAAACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Xlr3a ENSMUSG00000057836 ENSMUST00000074619,ENSMUST00000114524 3 2 2 287 X 70337225 70338621 CAAGAATTCGAAGAGCCAC 58 70334781 70334800 GTTCTTCTGGAGAGTGAGAG 59 NA DesignRelaxed Mus musculus 50 Mia1 ENSMUSG00000058217 ENSMUST00000071986 1 1 1 112 7 27965270 27965288 GTTACTATGGAGACCTGGC 59 27964842 27965194 GAAATCCCATTGATCGGTC 58 NA Mus musculus 50 Olfr1431 ENSMUSG00000058641 ENSMUST00000072316 1 1 1 60 19 12284228 12284247 CACACCCATGTATTTCTTCC 58 12284270 12284288 GGAAGTAACAAAGCAGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Col13a1 ENSMUSG00000058806 ENSMUST00000092484,ENSMUST00000105454 1 2 4 155 10 61424088 61441097 GAAATGGAAGTTCTACTCGC 58 61368015 61371434 TGACCTTTGATACCCACAC 59 NA Nonspecific Mus musculus 50 Il1rapl2 ENSMUSG00000059203 ENSMUST00000113063,ENSMUST00000075471 2 2 2 81 X 134771185 135039534 AGTTACAGCTTTACTCACAG 57 135039577 135039596 CAGCTGGACATCTATAACAC 57 NA Mus musculus 50 V1re13 ENSMUSG00000059206 ENSMUST00000079113 2 1 1 60 7 11333619 11333637 AATGTGACAAGGACACGAG 59 11333577 11333595 CACTGATGTCATCACTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmprss9 ENSMUSG00000059406 ENSMUST00000105334 1 1 2 166 10 80346709 80346727 TGTACATTTCCGGCTACAC 59 80346857 80347904 CTTCACACCTTCCTGTCAG 59 NA Mus musculus 50 Calcrl ENSMUSG00000059588 ENSMUST00000099944,ENSMUST00000074262 2 2 2 80 2 84213535 84215466 TTGCCTCTTAATATGGCTCTC 59 84213475 84213494 CTTGTTTCTAGTGACTCCCA 58 NA Mus musculus 50 Ntng1 ENSMUSG00000059857 ENSMUST00000106571 1 1 6 98 3 109644486 109654693 CAGTATCGGTACTCCTCCA 59 109642076 109642095 GACAAAGCTAATTTGGGAGC 59 NA Mus musculus 50 Stk22s1 ENSMUSG00000059891 ENSMUST00000080233 3 1 1 101 7 52199360 52206153 ATCACAGAACTACTGAGTGG 58 52206217 52206235 CTGAACGTGCTGATTAACC 58 NA Mus musculus 50 Ptp4a3 ENSMUSG00000059895 ENSMUST00000053232 2 1 1 204 15 73582268 73582286 GATCTCACTGGACTTGGTG 59 73582454 73584200 GTACTTCTTCAGGTCCTCG 59 NA DesignRelaxed, InUTR Mus musculus 50 Kif13b ENSMUSG00000060012 ENSMUST00000100473 3 1 1 80 14 65376411 65377395 ATCACTGCAGTGAGTTCAG 59 65377439 65377457 ATACTTCAATGGCTAGGGC 59 NA Mus musculus 50 Tpt1 ENSMUSG00000060126 ENSMUST00000110894,ENSMUST00000080850 2 2 2 67 14 76245443 76245461 CATCTACAAGATCCGGGAG 58 76245492 76246022 TTCTACTGACCATCTTGCC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Myl6 ENSMUSG00000060680 ENSMUST00000074642 3 1 1 60 14 56039178 56039196 GGAAGAAATAGAGACGCGA 59 56039136 56039154 TTCATAGTCGATGCAACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Obscn ENSMUSG00000061462 ENSMUST00000020732,ENSMUST00000052872,ENSMUST00000108794 2 3 3 80 11 58891727 58891746 AGGATGAAGATACGTACACC 58 58891438 58891685 TAGTGATGGATTGCTCTTCC 59 NA Mus musculus 50 V1rc31 ENSMUSG00000061481 ENSMUST00000075534 3 1 1 66 6 56974549 56974568 GTGTCTTTCTTTGTTGTCCT 58 56974502 56974520 TCCGTAACATTTCTGAGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lcn13 ENSMUSG00000062061 ENSMUST00000077667 2 1 1 106 2 25556355 25556609 TGTATTCTGGAACAATGGTC 57 25557090 25557108 CCACATGAATAACCTTCGT 57 NA Mus musculus 50 Rai1 ENSMUSG00000062115 ENSMUST00000064190,ENSMUST00000090806,ENSMUST00000102688 1 3 4 60 11 60003556 60003575 TAAGTACCTCTTGCCTTGTC 59 60003598 60003616 CCAAGGTCCTTGAAATTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1475 ENSMUSG00000062195 ENSMUST00000080801 2 1 1 66 19 13554223 13554242 TGTGGGATCTTACAATCCTC 58 13554176 13554194 CGTTGGAATTACAGAAGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Impdh2 ENSMUSG00000062867 ENSMUST00000081111 1 1 1 80 9 108464699 108465130 GTTCTTGGAAGAGATCATGAC 58 108465171 108465190 ATCTCATTTGCCTCTTTCAG 57 NA Nonspecific Mus musculus 50 ENSMUSG00000063087 ENSMUSG00000063087 ENSMUST00000074702 3 1 1 64 18 5567571 5583010 GAGAAAGAACACGGAGGAG 59 5567525 5567544 TTAATAGCCAAGCAAGAGCT 59 NA DesignNoJunction Mus musculus 50 Olfr339 ENSMUSG00000063287 ENSMUST00000071437 2 1 1 60 2 36276944 36276962 CTGTCTGAGTTCATCCTCC 59 36276986 36277004 CAGAGTACAAAGCTTGGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Syne2 ENSMUSG00000063450 ENSMUST00000085280,ENSMUST00000044217 1 2 2 80 12 77140011 77140030 CTCAACAAGAGAATCGACCA 59 77140070 77141359 ATCTGAATCTCTGCTGTAACTG 59 NA Mus musculus 50 Unc5d ENSMUSG00000063626 ENSMUST00000078597 1 1 1 80 8 29834740 29834758 ATGTCATTGACTCTTCTGC 57 29830452 29834699 GTAGTAGAGAATTTCCTTGACG 58 NA Mus musculus 50 EG624367 ENSMUSG00000063885 ENSMUST00000081029 1 1 1 152 14 48820357 48847025 ACATCTAAGGTTCCAGTATGAC 59 48847138 48847156 TACTCAGTACCAGCATCGT 59 NA InUTR Mus musculus 50 Olfr104 ENSMUSG00000064169 ENSMUST00000079951 3 1 1 67 17 37499249 37499267 TTCAGATCCAAGACTCCAC 58 37499298 37499316 AGCAGATATCTAGGCATGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-16-2 ENSMUSG00000065606 ENSMUST00000083672 2 1 1 61 3 68813839 68813859 CTAGCAGCACGTAAATATTGG 59 68813881 68813900 GCAGCACAATAATATTGGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rtp3 ENSMUSG00000066319 ENSMUST00000084922 2 1 1 96 9 110889424 110889443 ATTATCTCCTACCTCCTCGA 58 110889161 110889367 CATCTGTACTTTAGAGGAGGG 59 NA Mus musculus 50 Cox7a2l ENSMUSG00000066553 ENSMUST00000085550 1 1 1 77 12 25323899 25512736 CTAGAAGACACAGAAGGCG 59 25323840 25323858 CAACTTCTGCGTGAAACTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rnasel ENSMUSG00000066800 ENSMUST00000086209 3 1 1 89 1 155606793 155607909 AGTGGACATCTAAGATCGA 57 155607960 155607980 CTACAGTATCCTGATAAGGGT 57 NA Mus musculus 50 Eif1ay ENSMUSG00000067194 ENSMUST00000087143 3 1 1 87 X 155814386 155815398 GGATGGGCAAGAATATGCT 59 155815449 155815467 GCACAGTCTCTTTACACCA 59 NA Mus musculus 50 Klri1 ENSMUSG00000067610 ENSMUST00000088046 3 1 1 60 6 129653347 129653366 ACATCACTTCATCCTCTTCG 59 129648921 129648940 CACTGGAACAAAGATCACAG 58 NA DesignNoJunction Mus musculus 50 Rnase12 ENSMUSG00000068407 ENSMUST00000089798 3 1 1 60 14 51676845 51676864 TTCTGTTCTGGGAGAATGAG 59 51676804 51676822 TGCAATTGTTCTATGGACG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Aard ENSMUSG00000068522 ENSMUST00000090025 3 1 1 106 15 51876474 51876492 GATGAATTCCGAGTGTGGA 59 51876561 51876580 TAATGCTAGGAGGGTTTCAG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 LOC100042077 ENSMUSG00000068777 ENSMUST00000090640 2 1 1 60 14 7508244 7508262 GAAGCTGGTCCATAAAGTG 58 7472073 7508221 GGAAGATCAATGCTACTTGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Lce1e ENSMUSG00000068889 ENSMUST00000090867 3 1 1 86 3 92511454 92511472 TCTCCATTGTTTGATGTCC 57 92511386 92511405 AACATAGAACATTTCCCAGG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 C78339 ENSMUSG00000069237 ENSMUST00000099547,ENSMUST00000091627 1 2 2 81 13 46766687 46768923 CAGTGGAATAAAGGACATCTC 58 46768966 46768984 CAGGTCTTCCATTGATGTG 58 NA Mus musculus 50 Sft2d1 ENSMUSG00000069899 ENSMUST00000093169 2 1 1 295 11 45865638 45865656 TTCATTCCTTGGAACAGGG 59 45865361 45865379 CATACGGGATGTAGGACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-452 ENSMUSG00000070138 ENSMUST00000093629 3 1 1 60 X 69507619 69507637 TACAACTGTTTGCAGAGGA 58 69507577 69507596 TCTTTGCAGATGAGACTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc22a14 ENSMUSG00000070280 ENSMUST00000093775 2 1 1 80 9 119083117 119083137 TCTATCTTGGACTTCTGTACC 58 119082762 119083075 GTAACTGACGGTAAACCAC 58 NA Mus musculus 50 Olfr478 ENSMUSG00000070415 ENSMUST00000049719 1 1 1 60 7 115175612 115175632 GTTACTCATCTTCTGTCACAC 58 115175572 115175591 ATTGTATGTCTTTCCACCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem132b ENSMUSG00000070498 ENSMUST00000031446 2 1 1 181 5 126103713 126118560 TCACTCTTCGAATCAAGGC 59 126178940 126178958 AATCTCATAGAAGGAGCCG 58 NA DesignNoJunction Mus musculus 50 Spaca4 ENSMUSG00000070563 ENSMUST00000094424 1 1 1 64 7 52980799 52980817 GACGAAGATTGCTTCACAG 58 52980753 52980771 CAGCCTTTGTTGATGATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dgkd ENSMUSG00000070738 ENSMUST00000027517 3 1 1 80 1 89815227 89815245 TCAGAAGATTCAAGCAGCT 58 89815289 89818158 ATAACCGTAAGCCAAGGTG 59 NA Mus musculus 50 Tut1 ENSMUSG00000071645 ENSMUST00000096239 2 1 1 61 19 9034316 9036834 GATATGGAAGAGACCGAGC 59 9036859 9036877 TCCAAGGATGAAGTCTCTG 58 NA DesignNoJunction Mus musculus 50 Spef2 ENSMUSG00000072663 ENSMUST00000041840 3 1 1 82 15 9659421 9659440 GAGATACAAACCATGCAACC 59 9654997 9659376 CTGTTTAAGCGTTGCTCTC 59 NA Mus musculus 50 Olfr380 ENSMUSG00000072709 ENSMUST00000075532 2 1 1 60 11 73267291 73267310 ATCATGAGTCTCAAGCTCTG 59 73267250 73267270 TCAGTATACTAATCACCCAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1700001E04Rik ENSMUSG00000072743 ENSMUST00000100907 2 1 1 60 14 6421742 6421761 TTTCCATGAAGTTCTCCGAG 59 6421784 6422478 TTCTGCTTGATGCTGTAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 OTTMUSG00000019145 ENSMUSG00000072932 ENSMUST00000112814,ENSMUST00000101190 3 2 2 80 X 144246812 144259682 AAATTGACAGATCGTCTGCA 59 144259722 144259743 GTTCAACTGTCTCATTTCTTCG 59 NA Nonspecific Mus musculus 50 Nup62cl ENSMUSG00000072944 ENSMUST00000101212,ENSMUST00000113003 2 2 2 80 X 136569445 136573598 GAACTCTCATCCACAACCT 58 136569383 136569402 GTTGAAGCCACTTGTAATCG 59 NA Mus musculus 50 Atoh1 ENSMUSG00000073043 ENSMUST00000101351 3 1 1 91 6 64679545 64679563 CAGTATCTGCTGCATTCTC 57 64679618 64679636 CTTCTCCTTACCAGCTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073152 ENSMUSG00000073152 ENSMUST00000084713 2 1 1 147 5 21458570 21458855 TATCAGAGATATCCACAGCC 58 21458965 21458983 CTACATGACACATCCCGTC 59 NA DesignNoJunction Mus musculus 50 Olfr111 ENSMUSG00000073397 ENSMUST00000097325 3 1 1 67 17 37667719 37667738 TACTCGCTAGAGAAAGACAG 58 37667768 37667786 ATAGGATTCAGCATGGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NM_010478.2 ENSMUSG00000073416 ENSMUST00000097340 1 1 1 60 17 35093634 35093655 ACACTTTGTCTTAGAGATGACC 59 35093673 35093694 GGGAAGACATATAGTCTAGCTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 EG666457 ENSMUSG00000073485 ENSMUST00000097448 2 1 1 102 1 182744518 182744536 AAGCCTCTGAGACAATGTG 59 182744602 182744620 ATGTCACGAGATTTCTGCA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rpl31 ENSMUSG00000073702 ENSMUST00000086535 3 1 1 88 1 39426905 39426923 TTTGCCATGAAGGAAATGG 58 39426975 39427807 GGAACGTTCCTTATTCCCT 58 NA Nonspecific Mus musculus 50 Olfr687 ENSMUSG00000073909 ENSMUST00000098155 1 1 1 60 7 112424011 112424029 AACTGGATACTAAGCGTGC 59 112424052 112424071 AGCAGAATGAACTCAGAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr606 ENSMUSG00000073949 ENSMUST00000098200 1 1 1 60 7 110599912 110599930 TGGCTATGAGGAATTTCAC 57 110599951 110599972 CCCAATAATGTAGATAAGGCAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Olfr603 ENSMUSG00000073953 ENSMUST00000104880,ENSMUST00000098204 1 2 2 60 7 110459064 110459082 CTTGGCCAATCTCTATGTG 57 110459105 110459124 CCTCACTCCATAAATGACTG 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074056 ENSMUSG00000074056 ENSMUST00000098355 2 1 1 66 9 110021014 110021032 AGCTTGTGTCAAATCAACC 58 110021062 110021080 GGTTATGAACACTTGCCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gramd2 ENSMUSG00000074259 ENSMUST00000098661,ENSMUST00000114056 1 2 2 88 9 59562069 59563737 CATCTTTGTGATGATCTGCT 57 59563788 59563806 TCAGGGAACATAATTGCTG 57 NA Mus musculus 50 4930467E23Rik ENSMUSG00000074449 ENSMUST00000084046 3 1 1 80 8 19939006 19951742 GTCAGGTTCAATGAAGAAGTC 58 19937328 19937346 TTTAAGCTGTCTTGGTGGT 59 NA Nonspecific Mus musculus 50 Olfr1226 ENSMUSG00000075097 ENSMUST00000099790 1 1 1 67 2 89033895 89033913 TTTGAATGCTGCATGACAC 59 89033846 89033864 GAAAGGACAATCACCTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1106 ENSMUSG00000075164 ENSMUST00000099867 1 1 1 60 2 86888801 86888821 GACACATCCATGAATGAACTG 59 86888761 86888781 GTGTAGTTATGGCAATGACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1056 ENSMUSG00000075188 ENSMUST00000099893 2 1 1 60 2 86196105 86196123 AAAGTCTGCTGGGTATTGG 59 86196063 86196082 TGATCAGAGAAAGAAAGGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1012 ENSMUSG00000075210 ENSMUST00000099916 2 1 1 72 2 85599656 85599676 CCCATGATCTACAGTCTAAGG 59 85599604 85599625 CAGAAGGAGCTAACTTAAAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ttc30a2 ENSMUSG00000075272 ENSMUST00000099995 3 1 1 60 2 75815628 75815648 CCTAGCTTTAGCTTGTTACAG 58 75815588 75815607 ATTGGCAATATGCTTCAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075542 ENSMUSG00000075542 ENSMUST00000100431 1 1 1 60 15 79676066 79676084 TGACCAATGTGAGTCACAG 59 79676108 79676126 ATCGTGGCATGATCTTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-708 ENSMUSG00000076143 ENSMUST00000102189 3 1 1 60 7 103397963 103397982 GAGCTTACAATCTAGCTGGG 59 103398004 103398023 AAGCTCACAGTCTAGTTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-701 ENSMUSG00000076163 ENSMUST00000102208 1 1 1 66 5 111433190 111433208 TAGCCGCTGAAATAGATGG 59 111433238 111433256 TTGATAAGTGGCTAGCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-62 ENSMUSG00000076551 ENSMUST00000103352 3 1 1 146 6 69349935 69349955 GGATTTATGACACATCCAACC 59 69349809 69349827 ATGGGTAACCACTGTACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV5-9 ENSMUSG00000076639 ENSMUST00000103448 2 1 1 85 12 114900163 114900182 TATACCATGTCTTGGGTTCG 59 114900097 114900115 TAGTAGGTGTTACCACCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV8D-1 ENSMUSG00000076770 ENSMUST00000103580 3 1 1 65 14 53398202 53398220 GTTGTTGATGGTGTCACTG 58 53398395 53398416 AGATTCTCTTCTGCTAGTTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Q3UFZ0_MOUSE ENSMUSG00000078372 ENSMUST00000105164 3 1 1 68 12 35740942 35740963 CAGAAGTAATATGTCTCAGGAG 57 35740991 35741010 AGTTTAAACATCCCAACAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Scamp4 ENSMUSG00000078441 ENSMUST00000079883 3 1 1 106 10 80065651 80065669 GCTAGGACTTGGATAAGCG 59 80071592 80072089 AGTTGTTCTCCTTTCCTGC 59 NA InUTR Mus musculus 50 Mup1 ENSMUSG00000078674 ENSMUST00000098040 2 1 1 60 4 61334518 61334536 GCAAATCCATGTCTTGGAG 58 61333707 61334497 CTCTTCATCTCTTACAGTATGG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Zfp59 ENSMUSG00000078779 ENSMUST00000108332,ENSMUST00000108331 3 2 2 80 7 28631458 28631478 TTACTAGAGCAGGAGAAAGAG 58 28631519 28638419 ATAATCTGCCTCCAAATCTG 57 NA Nonspecific Mus musculus 50 D130040H23Rik ENSMUSG00000079038 ENSMUST00000110214 3 1 1 94 8 71824711 71825901 TACATAGAAGGCATGAAAGAGG 59 71825956 71825974 ATGCCCTTGAAGATGACTG 59 NA Mus musculus 50 D630005B22Rik ENSMUSG00000079102 ENSMUST00000063320 1 1 1 112 15 6279898 6280447 GCATTAACAGGAGAAGGGA 58 6286267 6286285 TAGCTGTAGTCACTTAGCG 58 NA Mus musculus 50 1700013D24Rik ENSMUSG00000079346 ENSMUST00000112537 1 1 1 134 6 124306909 124306927 TTTGCTCGAGATAGACCAG 58 124297834 124306427 TGAAGAAGACATCTTGCCC 59 NA Mus musculus 50 Gt4-1 ENSMUSG00000079844 ENSMUST00000056715,ENSMUST00000115809 1 2 2 102 16 13326634 13326652 CACTTACCCACTCTGAACG 59 13332158 13332720 TATTATGTCCTGTGCTCACAG 59 NA Mus musculus 50 MGI:2138230 ENSMUSG00000080018 ENSMUST00000116133 3 1 1 60 1 64779521 64779539 GAATTTCAGTGGCTTCCAC 59 64779479 64779497 TAAGACCTTCACAGAGTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Alox12 ENSMUSG00000000320 ENSMUST00000000329,ENSMUST00000108574 2 2 2 97 11 70063753 70064965 CCATGGCTATCCAGATTCAG 59 70063675 70063693 GATCTTAGCCAAGAGCCAG 59 NA Mus musculus 50 Hnrpd ENSMUSG00000000568 ENSMUST00000019128,ENSMUST00000112939 3 2 3 83 5 100392799 100392817 TTACGGAGGTTATGGAGGA 59 100391616 100392752 TAACCACTCTGCTGATTGC 59 NA Mus musculus 50 Sgca ENSMUSG00000001508 ENSMUST00000103162,ENSMUST00000100551 3 2 2 145 11 94830755 94830773 GAGACTTCCTGACAGATGC 59 94824701 94830379 AAACATCTGGATGTCAGAGG 59 NA Mus musculus 50 Cldn15 ENSMUSG00000001739 ENSMUST00000111093,ENSMUST00000001790 2 2 2 197 5 137448248 137448266 CCTCTTTCTAGGCATGGTG 59 137450382 137450488 AGTTCATACTTGGTTCCAGC 59 NA Mus musculus 50 Nfix ENSMUSG00000001911 ENSMUST00000109764,ENSMUST00000098572,ENSMUST00000063596 2 3 6 82 8 87240091 87240109 CTTCCTATGCCTGATTCCA 58 87237744 87240045 GTCGTTGTGAATGAAGGTG 59 NA Mus musculus 50 Slc39a13 ENSMUSG00000002105 ENSMUST00000111436,ENSMUST00000073575 2 2 4 150 2 90905757 90905775 GAAGATGTTCCTCAACAGC 58 90904950 90905069 ATAGCCACTGACTTTGAGG 58 NA Mus musculus 50 Ddb2 ENSMUSG00000002109 ENSMUST00000111352,ENSMUST00000028696 1 2 3 81 2 91057558 91058913 CAAACTCTTGCAAGGTCTG 58 91057495 91057513 TGTCCCATATTGTCTCCTG 58 NA Mus musculus 50 Sri ENSMUSG00000003161 ENSMUST00000088786,ENSMUST00000003245 2 2 2 80 5 8063340 8063359 CAGTTTCGATAGCGATAGGA 59 8063400 8063649 CTCAACCTGAATCCCATAGTC 59 NA Mus musculus 50 Irf3 ENSMUSG00000003184 ENSMUST00000107835,ENSMUST00000003284,ENSMUST00000107834 3 3 3 87 7 52257082 52257100 GCTACACTCTGTGGTTCTG 59 52257151 52257544 GTAGGAACAACCTTGACCA 59 NA Mus musculus 50 Hif3a ENSMUSG00000004328 ENSMUST00000108492,ENSMUST00000037762 3 2 3 81 7 17626585 17627953 TCTAGATATAGCTCAGGACCC 59 17626524 17626542 GAGCTGGAAGTCATCATCC 59 NA Mus musculus 50 Slc25a18 ENSMUSG00000004902 ENSMUST00000112682,ENSMUST00000000102 1 2 2 108 6 120736078 120736096 GTATAGCAGGTCTTGTGGG 59 120736168 120736312 AGGCAATCTGTCATTCCTC 59 NA Mus musculus 50 Prkacb ENSMUSG00000005034 ENSMUST00000102515,ENSMUST00000005164,ENSMUST00000106140,ENSMUST00000106138,ENSMUST00000106137 2 5 5 80 3 146411008 146413462 GAATTGGAAGGTTCAGTGAG 58 146410947 146410965 CGAGGGAATGAAGGTACTC 59 NA Mus musculus 50 Tfpt ENSMUSG00000006335 ENSMUST00000058880,ENSMUST00000108643 3 2 3 97 7 3572065 3572386 CAGTGCAGATTAAGGTTGAG 58 3571987 3572006 GTAGGGTAGCAATTTGTCTG 58 NA Mus musculus 50 Spnb4 ENSMUSG00000011751 ENSMUST00000011895 2 1 4 82 7 28203025 28203044 AAAGATTTGACCACAAGGTG 58 28202012 28202980 ATATCCGAAGTTGTCCTGG 58 NA Mus musculus 50 Gorasp2 ENSMUSG00000014959 ENSMUST00000028509,ENSMUST00000112201,ENSMUST00000112205 1 3 4 89 2 70526449 70526467 CAACTGTACCATTGTTGCC 59 70526519 70527248 GCATCAGACTTGGTAATGTG 58 NA Mus musculus 50 Mtif3 ENSMUSG00000016510 ENSMUST00000066675,ENSMUST00000016654,ENSMUST00000110566,ENSMUST00000110564 2 4 4 81 5 147768408 147768429 GAAGAAATACCACGTTCAAGTC 59 147767377 147768369 GTTAAATATCTCCTCCGTTTCC 58 NA Mus musculus 50 Zfp207 ENSMUSG00000017421 ENSMUST00000053740,ENSMUST00000017567,ENSMUST00000108216 3 3 3 83 11 80202580 80202599 AGGTTATATCCCACCAATGG 58 80202645 80202772 ATCAATGGAGGTATGCCTG 59 NA Mus musculus 50 Tomm34 ENSMUSG00000018322 ENSMUST00000109384,ENSMUST00000018466 1 2 2 80 2 163890679 163890698 GCCTACGTTGACTATAAGAC 57 163886735 163890637 TCTGGTTATTCTGTTGATGC 57 NA Mus musculus 50 Ybx2 ENSMUSG00000018554 ENSMUST00000087862 3 1 3 94 11 69752741 69752762 CAGCTATTAAGAGAAACAACCC 59 69752817 69754606 AGTTGGAATCACTCCTTCC 58 NA Mus musculus 50 Dullard ENSMUSG00000018559 ENSMUST00000108593,ENSMUST00000018703 1 2 2 168 11 69797785 69797803 TATCCTGCCCTTATCTCCT 58 69798029 69798247 GTCTATTACCACCTTGAGGA 58 NA Mus musculus 50 Rai12 ENSMUSG00000018565 ENSMUST00000108595,ENSMUST00000108594,ENSMUST00000018709 1 3 3 81 11 69788585 69788604 ACATTCCCTGTGTTACACTC 59 69784226 69788544 TCTACTAGGGAGTTATCACCTG 59 NA Mus musculus 50 Acadvl ENSMUSG00000018574 ENSMUST00000102574 1 1 2 150 11 69828670 69828688 TACTACTGTGCTTCAGGGA 59 69828191 69828298 AAAGGACTTCGATTCTGCC 59 NA Mus musculus 50 Rnf145 ENSMUSG00000019189 ENSMUST00000019333 1 1 2 82 11 44370933 44373484 AGAGACAAGAGTTTGTGGA 58 44373530 44373548 ATGTAGGCCATATACGCAG 58 NA Mus musculus 50 Tlcd1 ENSMUSG00000019437 ENSMUST00000092880,ENSMUST00000092879,ENSMUST00000098545 2 3 4 81 11 77993114 77993456 ATCATGTCATGGCTATGGG 59 77993501 77993519 ACCAGTAGTGTTAAGACGC 59 NA Mus musculus 50 Calr3 ENSMUSG00000019732 ENSMUST00000109973 2 1 3 110 8 74955345 74955364 GAGTATGACTGGAACCTGAC 59 74952046 74955272 GAAAGTGCTTTCCCAATCC 59 NA Mus musculus 50 Tcfe2a ENSMUSG00000020167 ENSMUST00000105344,ENSMUST00000105343,ENSMUST00000105345,ENSMUST00000105341,ENSMUST00000020379 2 5 10 85 10 79876001 79876019 AGGAAATCGCATCAGTAGC 59 79873354 79875952 CACCTCATCTGTACTGCTG 59 NA Mus musculus 50 Tcfe2a ENSMUSG00000020167 ENSMUST00000105344,ENSMUST00000105343,ENSMUST00000105345,ENSMUST00000105341,ENSMUST00000020379 3 5 10 91 10 79876010 79876028 AAGAGGATGAGGAAATCGC 59 79873357 79875955 CTCATCTGTACTGCTGGTG 59 NA Mus musculus 50 Fbxw11 ENSMUSG00000020271 ENSMUST00000076383 1 1 4 93 11 32580294 32608197 TGTCTCCAGAACACTTCAG 58 32611774 32611793 CAGATGACGTTCCATTACTG 58 NA Mus musculus 50 Spnb2 ENSMUSG00000020315 ENSMUST00000039018 3 1 5 108 11 30054336 30054354 GACAAGGCTCTTCAATTCC 58 30009965 30054264 CTTCCAGTAGCTCCAAGAG 59 NA Mus musculus 50 Osbp2 ENSMUSG00000020435 ENSMUST00000070552 3 1 4 81 11 3626568 3719848 CTCAGTCAGATGATTCTGGG 59 3626506 3626525 GTCTTAAGAGTGTGGTGGAG 59 NA Mus musculus 50 Myo19 ENSMUSG00000020527 ENSMUST00000093969,ENSMUST00000020837 1 2 2 85 11 84698831 84699179 CACTGGAAACAGTCCTGAG 59 84699228 84699246 CAGAGCTACCAAGGTACAG 59 NA Mus musculus 50 Nrcam ENSMUSG00000020598 ENSMUST00000110750 1 1 4 116 12 45677764 45691100 GAAGGTAAGAAGGCAATGG 58 45691180 45691198 GATGAAGCAAACAATCAGC 57 NA Mus musculus 50 Rnf135 ENSMUSG00000020707 ENSMUST00000017839,ENSMUST00000017833 1 2 2 60 11 80012508 80012526 CTCTAGCTCCTCTCCTCTG 59 80012549 80012568 GTAGTTTCCAGGACTTAAGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Foxg1 ENSMUSG00000020950 ENSMUST00000021333,ENSMUST00000110747 1 2 3 60 12 50486014 50486032 TCATCATGATGGCCATCAG 59 50486056 50486074 TCATAGATGCCATTGAGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lrrc16 ENSMUSG00000021338 ENSMUST00000072889,ENSMUST00000110402,ENSMUST00000110398,ENSMUST00000110400 3 4 7 83 13 24231242 24233540 TAAGGATCTCAAACTGTCCAC 59 24231179 24231197 AACACCAACTCTTCCAGTC 59 NA Mus musculus 50 Prl8a8 ENSMUSG00000021346 ENSMUST00000018389 3 1 3 197 13 27603473 27605000 TCACTTCTATGCACTCCTG 58 27602337 27603313 AATTGGTTGTGGTAAAGCTC 58 NA Mus musculus 50 Rasa1 ENSMUSG00000021549 ENSMUST00000109552,ENSMUST00000022034 1 2 2 80 13 85363914 85365096 ATCATGTGAGTTAAGTCCGT 58 85363853 85363874 GAAAGTATGCTCAATAGGTGTG 59 NA Mus musculus 50 Anxa7 ENSMUSG00000021814 ENSMUST00000065504 2 1 2 80 14 21284164 21286693 ATTATAGCAGTGATCCCGC 59 21284102 21284122 CTCTCATAGCATCAAAGTTGG 58 NA Mus musculus 50 Camk2g ENSMUSG00000021820 ENSMUST00000071816,ENSMUST00000080440,ENSMUST00000100837,ENSMUST00000076574 1 4 4 80 14 21585425 21585446 CACTGTATACATCAGATCCTGG 59 21585228 21585384 GTTCTCAGGCTTCAGATCC 59 NA Mus musculus 50 Sema5a ENSMUSG00000022231 ENSMUST00000067458 2 1 2 80 15 32390008 32390026 GAATGCTGTGGATTTCTCG 58 32390068 32404147 CTGAAGAGATAGTTTCTCGCT 59 NA Mus musculus 50 Cyp2d26 ENSMUSG00000022445 ENSMUST00000006094 3 1 1 60 15 82623576 82623597 TGCCCATCTATAATCACATAGG 59 82623272 82623290 TAAGGTGCAAGGATCACAC 59 NA DesignNoJunction Mus musculus 50 Pp11r ENSMUSG00000022468 ENSMUST00000100249,ENSMUST00000023105 1 2 2 82 15 97550106 97550558 TGATCATGAGGGTTTCTCC 58 97550042 97550060 CTACCCTGTAGATGGTCTC 57 NA Mus musculus 50 Ccdc80 ENSMUSG00000022665 ENSMUST00000099498,ENSMUST00000061050 1 2 2 80 16 45116426 45116446 GAGGAAGGAGTATGGAATGAC 59 45116486 45118224 TCGTAGTATTGCTTGACTCTC 59 NA Mus musculus 50 St3gal6 ENSMUSG00000022747 ENSMUST00000064549,ENSMUST00000114357,ENSMUST00000114358 1 3 3 80 16 58486556 58486575 CTTTATAAAGGTTGCTGCCA 58 58484927 58486515 CTGAAATATGTCTCGAAGGTC 58 NA Mus musculus 50 St3gal6 ENSMUSG00000022747 ENSMUST00000064549,ENSMUST00000114357,ENSMUST00000114358 1 3 3 80 16 58486556 58486575 CTTTATAAAGGTTGCTGCCA 58 58484927 58486515 CTGAAATATGTCTCGAAGGTC 58 NA Mus musculus 50 Dnm1l ENSMUSG00000022789 ENSMUST00000115749 2 1 4 177 16 16318561 16319553 CGGGACAAGTTAATTCAGG 58 16316736 16316755 CTGGCATAATTGGAATTGGT 58 NA Mus musculus 50 Robo1 ENSMUSG00000022883 ENSMUST00000114277,ENSMUST00000023600 3 2 3 80 16 72989997 72990015 AGAAGAGAAACGGACTCAC 58 72993928 72995370 GATAAGTTACTGTTGGCGTG 58 NA Mus musculus 50 Grik1 ENSMUSG00000022935 ENSMUST00000072256 1 1 3 92 16 87897130 87914408 CATTGAGCAGAAAGGAAAGTC 59 87897058 87897076 TCTACACCAAGGCTTTCTG 59 NA Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000114001,ENSMUST00000114002,ENSMUST00000056482,ENSMUST00000113996,ENSMUST00000116575,ENSMUST00000023678 1 6 16 89 16 91841848 91848978 TAGTCATGGTGGATGAAAGC 59 91849030 91849048 CATAGTTTGCAGGGAACCA 59 NA Mus musculus 50 Ivns1abp ENSMUSG00000023150 ENSMUST00000097543 1 1 3 80 1 153201152 153201170 GACGCTTATATTCAGGAGC 57 153201213 153203267 GGTTTGAACCTTTAGTCTCG 58 NA Mus musculus 50 St6gal2 ENSMUSG00000024172 ENSMUST00000025000,ENSMUST00000086878 2 2 2 95 17 55635610 55635628 TCACTTCATTGACAGTGCT 59 55635687 55637543 GGCTTCTTATACCACAGGT 58 NA Mus musculus 50 Svil ENSMUSG00000024236 ENSMUST00000115871,ENSMUST00000025079,ENSMUST00000055015 3 3 3 160 18 5046763 5046782 AAAGAAAGAATTGCTAGGCG 58 5046905 5048892 TTGGATCGCCCAATATGAG 59 NA DesignRelaxed Mus musculus 50 Gabbr1 ENSMUSG00000024462 ENSMUST00000025338,ENSMUST00000113650 2 2 2 90 17 37191131 37191149 TCAAGATCATCCTCATGCC 59 37191201 37191692 CCATATGAGAGCACAATAAGG 58 NA Mus musculus 50 Incenp ENSMUSG00000024660 ENSMUST00000025562,ENSMUST00000113168 2 2 2 80 19 9949352 9949370 AGGCAAAGAAAGCTAAGGA 58 9948845 9949308 AGGTACAAACAGGAGACTG 58 NA Mus musculus 50 Ehd1 ENSMUSG00000024772 ENSMUST00000099884,ENSMUST00000025684 1 2 2 81 19 6297688 6298082 TAAGATGCAGGAACTCCTG 58 6298127 6298145 ATCATCCACTGTATCCAGC 58 NA Mus musculus 50 Tm7sf2 ENSMUSG00000024799 ENSMUST00000025713,ENSMUST00000113544,ENSMUST00000113543 1 3 3 80 19 6063984 6064090 CTCTGGTATGAGGAGTCTG 58 6063922 6063940 TAGATCTCCAAAGACCAGC 58 NA Mus musculus 50 Mxi1 ENSMUSG00000025025 ENSMUST00000003870,ENSMUST00000025998,ENSMUST00000111737 2 3 3 88 19 53405963 53420948 ACTGCCAACAGATCTACAC 59 53444061 53444079 GGGATCAGAACTTTCAAGC 58 NA Mus musculus 50 Pdcd11 ENSMUSG00000025047 ENSMUST00000072141 3 1 2 80 19 47203789 47204126 GAGAAATACAAGGAAGCTGG 58 47204168 47204187 ATATTTGATCCAGACAGCCT 58 NA Mus musculus 50 Aspscr1 ENSMUSG00000025142 ENSMUST00000026135,ENSMUST00000106159,ENSMUST00000106158,ENSMUST00000103016,ENSMUST00000106160 1 5 5 109 11 120548004 120549849 ATGAGGAATGAGGTGACTG 58 120550230 120550249 GTGTCACACTGCTTTATGAC 59 NA Mus musculus 50 Arhgef9 ENSMUSG00000025656 ENSMUST00000113876,ENSMUST00000113885,ENSMUST00000113883,ENSMUST00000113882,ENSMUST00000113878,ENSMUST00000113881,ENSMUST00000113880,ENSMUST00000113873 2 8 10 63 X 92250315 92250333 AATCAGAAGAGACAGGCTG 58 92247482 92250288 CAGAGTTGACACCTTTCTG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Slco5a1 ENSMUSG00000025938 ENSMUST00000115403,ENSMUST00000115401 3 2 4 98 1 12869219 12869238 GCCATTATAGTGACTCTCAG 57 12862396 12866396 AGTAGGAATGTATGCAAGTG 57 NA Mus musculus 50 Icos ENSMUSG00000026009 ENSMUST00000102827,ENSMUST00000027162 3 2 2 94 1 61050801 61050819 GCTATTACTTCTGCAGCCT 59 61050874 61051464 GAGCTGGGATTCATAAATATGC 59 NA Mus musculus 50 Trak2 ENSMUSG00000026028 ENSMUST00000027186,ENSMUST00000057069 1 2 2 80 1 58975663 58975682 CGAGAAGGAAGAACTAAGAC 57 58972654 58975620 TGTAACTCATGAAGCTCCA 58 NA Mus musculus 50 Osgepl1 ENSMUSG00000026096 ENSMUST00000027265,ENSMUST00000114484 2 2 2 84 1 53378042 53378345 TCATGATTGCATGGAATGG 58 53378392 53378411 TTTGGTTCATATCGGATGTC 57 NA Mus musculus 50 Asb1 ENSMUSG00000026311 ENSMUST00000027538,ENSMUST00000086843 3 2 3 107 1 93443796 93448637 GGCTCTTATCAGGTATGGG 58 93448708 93448726 TATAGAGGACAGACCACCA 58 NA Mus musculus 50 Capn2 ENSMUSG00000026509 ENSMUST00000068505 3 1 2 80 1 184416722 184416740 AACTCACCAAGATGGATGG 59 184414489 184416679 TCATCCAGAAGGTATTTGGG 59 NA Mus musculus 50 Nmt2 ENSMUSG00000026643 ENSMUST00000081932 3 1 3 137 2 3222138 3222157 AAAGGAGAAGCCAAATTCTG 58 3222706 3224267 ATAGTATCACCACCCATGG 58 NA Mus musculus 50 Dclre1c ENSMUSG00000026648 ENSMUST00000100463,ENSMUST00000102988,ENSMUST00000100462,ENSMUST00000061852,ENSMUST00000115069 2 5 7 103 2 3346595 3346614 CCAAAGTACAGATTCTGGGA 59 3351074 3353723 ACAACCTCTTCCTTCTCAC 58 NA Mus musculus 50 Rabgap1l ENSMUSG00000026721 ENSMUST00000028049,ENSMUST00000111640,ENSMUST00000028048 3 3 5 80 1 162669210 162670891 CAGCTGAAGATAGCTTCCA 59 162669148 162669167 TTGTCCTTTCTCGGAATCTC 59 NA Mus musculus 50 Pfkfb3 ENSMUSG00000026773 ENSMUST00000114846,ENSMUST00000114845,ENSMUST00000028114,ENSMUST00000100411,ENSMUST00000049849 2 5 7 129 2 11403716 11403734 CATACCTGAAATGTCCGCT 59 11401988 11403505 TTCTTTGCATCCTCTGACC 59 NA Mus musculus 50 Odf2 ENSMUSG00000026790 ENSMUST00000113756,ENSMUST00000113757,ENSMUST00000113759,ENSMUST00000113755,ENSMUST00000046571,ENSMUST00000113766 3 6 13 80 2 29748608 29748626 GGATGAGAACACTCCTGTC 59 29748670 29748977 CGCTTATGAGATTTCTGGC 58 NA Mus musculus 50 Abl1 ENSMUSG00000026842 ENSMUST00000075759,ENSMUST00000113455,ENSMUST00000028190,ENSMUST00000113454 3 4 4 83 2 31640287 31645796 GAAGACCTTGAAGGAGGAC 59 31645842 31645861 AGGTTAGGGTGTTTGATCTC 59 NA Mus musculus 50 Il1rn ENSMUSG00000026981 ENSMUST00000028358,ENSMUST00000114487,ENSMUST00000114486,ENSMUST00000114482,ENSMUST00000114485 1 5 5 106 2 24204053 24204073 CCTATTGACCTTCATAGTGTG 57 24204141 24204945 ATGTTAACTTCCTCCAGCT 58 NA Mus musculus 50 Ssfa2 ENSMUSG00000027007 ENSMUST00000028393,ENSMUST00000111788,ENSMUST00000111785,ENSMUST00000111784 3 4 4 80 2 79482279 79482298 CAGTTTCATCAGAAAGGGAG 58 79482341 79483573 CAGTTCTGAGACACTTGAC 57 NA Mus musculus 50 Itga4 ENSMUSG00000027009 ENSMUST00000099972,ENSMUST00000028395 3 2 2 80 2 79127185 79127203 GAAGACGACTTGAGAGGTG 59 79127244 79128372 TTCAATTCTCTGTGAGTAGGTG 59 NA Mus musculus 50 Xirp2 ENSMUSG00000027022 ENSMUST00000112347 1 1 2 87 2 67355159 67355178 GATATGAAACCTCAGATGCG 58 67355228 67357292 CTTGGACCAACAGTTTCAC 58 NA Mus musculus 50 D2Ertd750e ENSMUSG00000027331 ENSMUST00000028803,ENSMUST00000110842 1 2 2 85 2 118643699 118643717 AAGTCACCAAATCGAGACG 59 118644610 118649165 CGGTTTGTAGCTGTTTCTG 59 NA Mus musculus 50 Olfm3 ENSMUSG00000027965 ENSMUST00000081752,ENSMUST00000051309 3 2 2 83 3 114823852 114823870 CAAGACATCTGGAACTCGA 59 114823915 114825114 CTGTCCATATACCAGACTCTG 59 NA Mus musculus 50 Nola1 ENSMUSG00000028010 ENSMUST00000029643,ENSMUST00000106366 3 2 2 155 3 129532403 129533524 AACGTGTCGTCTTGTTAGG 59 129532266 129532286 GCTGTCCAAATATCTCATCCA 59 NA Mus musculus 50 Rap1gds1 ENSMUSG00000028149 ENSMUST00000029796 3 1 2 86 3 138678564 138678585 CAGCTGTTAAATAGCAAAGACC 59 138628950 138678517 CTGAAGGGAATGGCTATCG 59 NA Mus musculus 50 Asph ENSMUSG00000028207 ENSMUST00000108339,ENSMUST00000078139,ENSMUST00000108340,ENSMUST00000029860 1 4 17 80 4 9464873 9464891 AACGCATTTGAAGAACTGG 58 9459198 9464829 CAAGTCATCTTCACACTGC 58 NA Mus musculus 50 Dnajc6 ENSMUSG00000028528 ENSMUST00000106930,ENSMUST00000038207,ENSMUST00000106933,ENSMUST00000094953 3 4 4 80 4 101296330 101296348 TCTAAACACATCCAGTGCT 58 101296392 101298307 GTACTAGAAGCATGCACTG 57 NA Mus musculus 50 Slc6a9 ENSMUSG00000028542 ENSMUST00000063857,ENSMUST00000030269 3 2 3 95 4 117515728 117528485 CAAAGGGATGTTGAATGGT 57 117528544 117528562 AGTACAAACTCGATCTGGT 57 NA Mus musculus 50 Bai2 ENSMUSG00000028782 ENSMUST00000106017,ENSMUST00000106015,ENSMUST00000106012,ENSMUST00000030571,ENSMUST00000097868,ENSMUST00000106018 3 6 6 81 4 129698485 129698812 ACTTGGACTTTGAGAAGGTG 59 129698856 129698874 AAAGTGTGGAACTTCTGGT 58 NA Mus musculus 50 Srrm1 ENSMUSG00000028809 ENSMUST00000105861,ENSMUST00000084846,ENSMUST00000105862,ENSMUST00000030613,ENSMUST00000097847 2 5 5 80 4 134902697 134902717 TAACTGAGATCCTTGGATTCG 59 134900572 134902655 TGGAATCTGGGTTCTTCAC 59 NA Mus musculus 50 Cd164l2 ENSMUSG00000028865 ENSMUST00000097852,ENSMUST00000030679,ENSMUST00000105910 3 3 3 93 4 132777476 132777494 CTTCTCCATTTGTGTCTGG 58 132777651 132777669 ATAGATTGAGCAACCCTCC 58 NA DesignNoJunction Mus musculus 50 Mthfr ENSMUSG00000029009 ENSMUST00000097788,ENSMUST00000069604 1 2 2 80 4 147422361 147425484 ATCTTCCCTATTCAGGGCT 59 147425528 147425546 ATCCTTGATCTTCTGTGGC 59 NA Mus musculus 50 Sirt4 ENSMUSG00000029524 ENSMUST00000112066,ENSMUST00000112067 2 2 2 92 5 115929676 115929694 TGCTGCCTTTAATAGACCC 59 115928409 115929620 CTTAGGGATCTTGAGCAGC 59 NA Mus musculus 50 Mad2l1 ENSMUSG00000029910 ENSMUST00000116605,ENSMUST00000079549,ENSMUST00000101343 3 3 3 95 6 66489049 66489770 GTTGGAAGTTTCTTGTTCCT 58 66489828 66489846 GTAATAAATTGCGGTCCCG 58 NA Mus musculus 50 Rpl28 ENSMUSG00000030432 ENSMUST00000032597,ENSMUST00000078432 2 2 2 60 7 4745700 4745718 CACCATCAACAAGAATGCT 58 4745741 4745760 GTTCTTTCGGATCATGTGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Fchsd2 ENSMUSG00000030691 ENSMUST00000098250 2 1 2 80 7 108392659 108392680 CTGTTTCTACAAGAGAATGCTG 59 108392719 108398967 TTGTCGACTAGTATCACTGTC 58 NA Mus musculus 50 Prr14 ENSMUSG00000030822 ENSMUST00000106292,ENSMUST00000106293,ENSMUST00000033095 1 3 3 80 7 134619442 134619460 TTCAGAATACGGAGGACAC 58 134619502 134619745 CTTATTCAACCTGATTGGTCG 59 NA Mus musculus 50 Otud5 ENSMUSG00000031154 ENSMUST00000115666,ENSMUST00000115668,ENSMUST00000115665,ENSMUST00000033494 2 4 5 86 X 7444942 7445061 TAGCACAGAACCTATCAACAC 59 7445109 7445127 TAGTGGATATTCCGGTGGT 59 NA Mus musculus 50 Hdac6 ENSMUSG00000031161 ENSMUST00000115642,ENSMUST00000033501 3 2 2 81 X 7513556 7513574 TCCTAATCGTGGATTGGGA 59 7513374 7513515 GACACGTATAATACACTAGGGTC 59 NA Mus musculus 50 Rpgr ENSMUSG00000031174 ENSMUST00000044789 2 1 13 112 X 9646679 9650902 ATATAAAGACACTCCGTGGT 58 9646586 9646604 GAATGTCACATCTGGTTCC 58 NA Mus musculus 50 Gpm6b ENSMUSG00000031342 ENSMUST00000112236,ENSMUST00000060210,ENSMUST00000112228,ENSMUST00000112229 1 4 12 80 X 162821868 162821887 TCTACATGTCCTATCACCTG 57 162821930 162824899 TCATGAGGAAGTGGATCAG 58 NA Mus musculus 50 Ard1 ENSMUSG00000031388 ENSMUST00000114387,ENSMUST00000114389 3 2 6 182 X 71164878 71165103 GTCAGGAAGAGTAACAGGG 58 71162580 71162598 CTAAGTCTCCAGACAGGAG 58 NA Mus musculus 50 Pcm1 ENSMUSG00000031592 ENSMUST00000045218 1 1 2 161 8 42346528 42352551 AAATCCTTGCCAGAGATCC 59 42352676 42352694 CTTGCTCTGCTTTATGCTG 59 NA Mus musculus 50 Nek1 ENSMUSG00000031644 ENSMUST00000036594 3 1 2 118 8 63550624 63551084 AGGAAGAGGTTTATTTGGCA 59 63551559 63551578 TTGTCCTTTGGTACCATCAG 59 NA Mus musculus 50 Mtmr2 ENSMUSG00000031918 ENSMUST00000115652,ENSMUST00000034396,ENSMUST00000088508 1 3 3 111 9 13609329 13609347 GCTACTCCAATCATGTCCT 58 13609422 13609832 CTGTGGATAGGTTCCTGAG 58 NA Mus musculus 50 Yipf2 ENSMUSG00000032182 ENSMUST00000078572,ENSMUST00000034700 1 2 2 95 9 21394358 21394376 GTTGTCCGAGAGGATACAC 59 21394196 21394299 GAAGTACAGCTTACAGCCT 58 NA Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113705,ENSMUST00000113695,ENSMUST00000034928,ENSMUST00000113690,ENSMUST00000113707,ENSMUST00000113693,ENSMUST00000113686,ENSMUST00000113685,ENSMUST00000113687,ENSMUST00000030185 2 10 16 119 9 66879826 66880611 CTCTCAGAAGGCAAATGTG 58 66879289 66879310 CTCCTCTTCATATTTGTCTTCC 58 NA Mus musculus 50 Cdc14a ENSMUSG00000033502 ENSMUST00000090464 1 1 2 80 3 116095792 116095811 AAGATAGTGCACTACACCTC 58 116069616 116095749 GTAGATGACGGCATAAGCA 59 NA Mus musculus 50 Acbd6 ENSMUSG00000033701 ENSMUST00000035560 2 1 3 85 1 157448656 157463006 GAAACAATCAGGGAAGAAGAC 58 157463053 157463071 TTCGATTTGATGGCTTTGG 58 NA Mus musculus 50 Rpap2 ENSMUSG00000033773 ENSMUST00000112650,ENSMUST00000112654,ENSMUST00000065422,ENSMUST00000112653,ENSMUST00000112655 1 5 6 129 5 108030848 108032546 AATTCCTGAAGGAGTGTGG 59 108032639 108032853 TTCTGTTTCGGGATAACCC 59 NA Mus musculus 50 Aspm ENSMUSG00000033952 ENSMUST00000097554 2 1 2 192 1 141373297 141373316 GCTGCTAGAGTTATTCAGTC 57 141373471 141378924 TACATCCAGCCTGAATGAG 58 NA Mus musculus 50 Gpbp1l1 ENSMUSG00000034042 ENSMUST00000030460,ENSMUST00000054876,ENSMUST00000106475 2 3 3 295 4 116246118 116246949 GACTACGGGAGATTCTTGG 59 116247208 116251858 AAGAAGGGAAGTCTTCCTC 58 NA DesignRelaxed Mus musculus 50 Setd5 ENSMUSG00000034269 ENSMUST00000042889 1 1 3 80 6 113059913 113059931 GAGAAGAGCGTGTATTCCA 59 113059974 113060376 GATGATCGTAGCATAAGGCA 59 NA Mus musculus 50 Caskin2 ENSMUSG00000034471 ENSMUST00000041684,ENSMUST00000106482 1 2 2 92 11 115667934 115668044 CATTATGAGGTGTCAGAAATGC 59 115667863 115667881 TTCACAGGCTAGGTCTAGG 59 NA Mus musculus 50 Cobll1 ENSMUSG00000034903 ENSMUST00000112431,ENSMUST00000102726,ENSMUST00000072921,ENSMUST00000112422,ENSMUST00000068356 1 5 9 81 2 64941441 64943779 CTTGACCTCTGGTGTAAGC 59 64941378 64941396 CGGATCTTTAGATGCCTCG 59 NA Nonspecific Mus musculus 50 Pkig ENSMUSG00000035268 ENSMUST00000109400 2 1 3 167 2 163519854 163519872 ATCTGACCTAGGATCCCTG 59 163546904 163546922 GATGAAGTCCGAGTAGGAG 58 NA DesignNoJunction, InUTR Mus musculus 50 Stab2 ENSMUSG00000035459 ENSMUST00000099391 3 1 3 95 10 86381603 86381769 ATCAACAAGACTCTCATGGAG 59 86381528 86381546 GTCACATATGACAGAGGCC 59 NA Mus musculus 50 Nme5 ENSMUSG00000035984 ENSMUST00000079287 2 1 2 91 18 34731167 34731185 ATAAGGCCATCTCCTACTG 57 34729537 34731112 GTATATCGCCCTTAAGCTG 57 NA Mus musculus 50 Fnip1 ENSMUSG00000035992 ENSMUST00000046835,ENSMUST00000108898 1 2 2 80 11 54314124 54314142 ACATTCCTCTCAGAGTGTG 58 54314183 54315773 CCATACAAATCTCCAAGTTGTG 59 NA Mus musculus 50 6330500D04Rik ENSMUSG00000036006 ENSMUST00000110383,ENSMUST00000110384,ENSMUST00000038477 2 3 5 135 13 24787562 24788349 GTCCTTCTTTAGATGGTTGC 58 24788447 24788465 ATAGAATTCTAGCAGGGCC 58 NA Mus musculus 50 Arhgap26 ENSMUSG00000036452 ENSMUST00000060850 2 1 6 121 18 39522493 39522773 GTGTTGTAATTCCCAGCAC 59 39522855 39530741 CTGAGATGGATGAACATTATCG 58 NA InUTR Mus musculus 50 6430550H21Rik ENSMUSG00000036502 ENSMUST00000089054 3 1 3 125 X 35589026 35589044 AACCTGATTGAGAACAAGC 57 35578294 35586290 AGTTATGACAATGTGTCTGG 57 NA Mus musculus 50 9030025P20Rik ENSMUSG00000036552 ENSMUST00000040594,ENSMUST00000097393,ENSMUST00000097394 1 3 5 91 17 15196867 15196885 CTTTGCAGCTAAGACACAG 58 15196940 15198042 AAGTCTAACACTGCTGAGC 59 NA Mus musculus 50 Cab39 ENSMUSG00000036707 ENSMUST00000113360,ENSMUST00000113363,ENSMUST00000097666,ENSMUST00000082149 2 4 4 81 1 87744924 87744944 CTCAAGCTAATGATGAACCTC 58 87744987 87745617 CCACAAACACCTTGAACAC 59 NA Mus musculus 50 Kcnk2 ENSMUSG00000037624 ENSMUST00000110920 3 1 2 138 1 191163971 191167194 GTCTTGGAATAAGGATGGC 57 191163851 191163870 ATAACATTAATGGCCGAGTC 57 NA Mus musculus 50 Nufip2 ENSMUSG00000037857 ENSMUST00000036677,ENSMUST00000100802 2 2 2 93 11 77506696 77506714 GAAAGGAATGATAGCTGGG 57 77519025 77519043 CTTGCTTCTGCAAATTCCA 58 NA DesignNoJunction Mus musculus 50 Als2cr4 ENSMUSG00000038079 ENSMUST00000094917,ENSMUST00000087475 1 2 3 186 1 59172762 59174183 CTATCCAAGACGATATTCCAC 57 59170942 59170960 TTCTTCTGTCTCCTTGGAG 58 NA Mus musculus 50 Phf20 ENSMUSG00000038116 ENSMUST00000088600,ENSMUST00000037401 2 2 2 91 2 156079968 156079986 CAAATAAACCAGCAAGTGC 57 156080041 156090029 ACAGTGTAAGTACCATCCT 57 NA Mus musculus 50 Mical2 ENSMUSG00000038244 ENSMUST00000106649 2 1 3 63 7 119480481 119488770 CCAGAAAGCTGACAGTAGG 59 119488797 119488815 TTGACCAGAACTTCAGCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 P140 ENSMUSG00000038453 ENSMUST00000107596,ENSMUST00000107595,ENSMUST00000064145,ENSMUST00000107594,ENSMUST00000107593,ENSMUST00000107590 2 6 7 81 11 97413038 97413056 CTGAAGAGCAAGTACCCTC 59 97403856 97412993 TCCAGTAGTTTGGTTGCTG 59 NA Mus musculus 50 Atp6v0a4 ENSMUSG00000038600 ENSMUST00000040259,ENSMUST00000114908 2 2 2 80 6 38008778 38008796 CTCATCCACTTTATCGGCA 59 38004648 38008734 GACTTCTTGCTGATGTCCA 59 NA Mus musculus 50 Gngt2 ENSMUSG00000038811 ENSMUST00000107712,ENSMUST00000107714,ENSMUST00000107711,ENSMUST00000100532,ENSMUST00000036088,ENSMUST00000107709,ENSMUST00000107708 3 7 7 96 11 95706447 95706809 GTGATCTGATTTCCAAGACAG 58 95706867 95706885 TTCTTGTCTTCTGGGATGC 59 NA Mus musculus 50 Ttc16 ENSMUSG00000039021 ENSMUST00000091059 3 1 2 110 2 32630067 32630577 GTTATTAAAGGAGCCTCACAG 58 32629977 32629995 TAGAACACATGACTGGTCC 58 NA Mus musculus 50 Whrn ENSMUSG00000039137 ENSMUST00000084510,ENSMUST00000107391,ENSMUST00000095038 1 3 11 118 4 63080515 63090128 CTGATGGAGAATACATTAGACC 57 63079619 63079637 ATACCAGGCAGATCTTCTG 58 NA Mus musculus 50 Ccbl1 ENSMUSG00000039648 ENSMUST00000044038,ENSMUST00000113662,ENSMUST00000113663,ENSMUST00000113661,ENSMUST00000113664,ENSMUST00000113659 2 6 8 87 2 30042820 30043220 CCTCTGGGAAAGGTATTCTC 59 30042752 30042770 CCTCATCAGAGAAGCACAG 59 NA Mus musculus 50 1810049H13Rik ENSMUSG00000039670 ENSMUST00000044007 1 1 1 60 11 120318399 120318417 AGTGCAAGTCACTGATAGC 59 120318357 120318375 TTGGAAACCTTCTTCCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 5730528L13Rik ENSMUSG00000039693 ENSMUST00000061135,ENSMUST00000064807,ENSMUST00000107704 2 3 4 85 4 48565639 48565657 CTGTACTTCCTTCAGAGCC 59 48573719 48573737 CGATTTGAAACAGCAAAGG 57 NA DesignNoJunction Mus musculus 50 Ccdc67 ENSMUSG00000039977 ENSMUST00000115592,ENSMUST00000115593 2 2 3 90 9 15379782 15392441 GAATTAAGCAAGGCTGTGG 59 15379710 15379728 TTCGGAGTCTTTCGTTCTC 59 NA Mus musculus 50 Havcr1 ENSMUSG00000040405 ENSMUST00000109224,ENSMUST00000047568 2 2 4 82 11 46569716 46569735 ACATGTACCAACATCAACCA 59 46569780 46580151 TAGTGGGTTCTGGTTTGTG 59 NA Mus musculus 50 Usp45 ENSMUSG00000040455 ENSMUST00000040429,ENSMUST00000108232 2 2 3 95 4 21744077 21751576 GAAGAAAGGAACCAACTAAGTC 58 21751631 21751650 GTTGTCATTCTTTGGGTGTG 59 NA Mus musculus 50 Camta2 ENSMUSG00000040712 ENSMUST00000108544,ENSMUST00000036299 3 2 5 81 11 70484230 70484402 TGCACTTAAGTTTGCACTC 58 70484167 70484186 CTGTTCATAGTAGCTTCGGA 58 NA Mus musculus 50 Ulk4 ENSMUSG00000040936 ENSMUST00000098284,ENSMUST00000051479,ENSMUST00000098283 2 3 4 93 9 121175727 121182004 AAATAACCAACTGGGTCCG 59 121175652 121175670 AACCAGAGATGATTGCTGG 59 NA Mus musculus 50 Adora1 ENSMUSG00000042429 ENSMUST00000086465,ENSMUST00000038191 2 2 2 60 1 136099591 136099609 GAAGATTTGGAACGACCAC 58 136099549 136099568 TGGGATATCTTCCTCAATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 9330129D05Rik ENSMUSG00000042647 ENSMUST00000041252,ENSMUST00000111776 2 2 2 188 5 122057259 122057383 ATGACTGATCGAAAGGTGG 59 122055628 122055646 CATAGATTGTTGCTGGTGC 59 NA Mus musculus 50 Synpo ENSMUSG00000043079 ENSMUST00000097566,ENSMUST00000031639,ENSMUST00000115318 2 3 3 60 18 60763353 60763373 GCATTCTCTTGATTGACAAGG 59 60763313 60763331 TCTCTAGAGAAGGTGCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rhbdl2 ENSMUSG00000043333 ENSMUST00000053202,ENSMUST00000106204 3 2 2 103 4 123502157 123504091 TCTGATAGTTGCGTCAGAC 59 123506792 123506810 CAAATCCACCTGCAATGTG 59 NA Nonspecific Mus musculus 50 Gprasp1 ENSMUSG00000043384 ENSMUST00000113147,ENSMUST00000113145,ENSMUST00000113144 3 3 5 80 X 132283307 132286487 TACACTCTTACCCAGACCA 59 132286531 132286549 AATGGTTGAACAATGCAGC 59 NA InUTR Mus musculus 50 E430028B21Rik ENSMUSG00000043702 ENSMUST00000052932 2 1 1 60 14 27485873 27485891 AATACCCATCTCTACTGGC 58 27485421 27485442 CTACTTCCATTTGAATGAGACG 59 NA DesignNoJunction Mus musculus 50 Pkhd1 ENSMUSG00000043760 ENSMUST00000060305,ENSMUST00000088448 3 2 3 80 1 20199287 20199305 TCATCCTGTAGAGGGAGAC 59 20191460 20199244 GAGAAGTTGAAGAACACCAG 58 NA Mus musculus 50 Trp53i13 ENSMUSG00000044328 ENSMUST00000094005 1 1 2 125 11 77329079 77329097 CTATGACCCAATCCAGAGC 59 77326186 77326406 CTTGGTAACACCTGTGGAG 59 NA Mus musculus 50 Trp53i13 ENSMUSG00000044328 ENSMUST00000094005 2 1 2 127 11 77329079 77329097 CTATGACCCAATCCAGAGC 59 77326184 77326404 CTCTTGGTAACACCTGTGG 59 NA Mus musculus 50 Lingo2 ENSMUSG00000045083 ENSMUST00000108122 2 1 4 130 4 36384607 36665907 ATATTGTGGGATTGGAGAGTG 59 36206927 36206946 CACTCTTGGTCTTAGAACCT 58 NA InUTR Mus musculus 50 Olfr1489 ENSMUSG00000045678 ENSMUST00000112921,ENSMUST00000053113 1 2 2 60 19 13707982 13708002 CCTTGTACTACTCTACCTCCA 59 13708023 13708042 TAAGAACCCACAATGAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnrg ENSMUSG00000046168 ENSMUST00000051184 1 1 1 60 14 62226461 62226480 AGAGACCAAGAGTTCAAGAC 58 62226502 62226521 ATAAAGCACCATCTCTGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000000712 ENSMUSG00000047889 ENSMUST00000059637 3 1 1 83 13 33761004 33761023 ACTTCAAAGGATACTGGGAG 58 33761069 33762504 GTTTCACCACATTCTTGCT 58 NA Mus musculus 50 Gpr85 ENSMUSG00000048216 ENSMUST00000115492,ENSMUST00000115491,ENSMUST00000060442 3 3 3 60 6 13786727 13786745 AGCTCCTTACTACTTCCTG 57 13786685 13786703 ACAAATTGCAGATCTGAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 2210020M01Rik ENSMUSG00000048442 ENSMUST00000052422 3 1 1 186 11 115766609 115767006 TTTCACAGCTACTGTCCTG 59 115767154 115767174 GTAATAGCCTGGGTTACAGTC 59 NA InUTR Mus musculus 50 4732415M23Rik ENSMUSG00000048478 ENSMUST00000060133 1 1 1 104 8 125737128 125745726 TCGTCTGAAGACAAACCTG 59 125745794 125745812 GTAGCTGATTAGCGTCTCG 59 NA Mus musculus 50 Bdnf ENSMUSG00000048482 ENSMUST00000111044,ENSMUST00000111042 1 2 11 80 2 109549804 109563543 AATGGTGTCGTAAAGTTCCA 59 109563583 109563604 GCAACCGAAGTATGAAATAACC 59 NA InUTR Mus musculus 50 Ivl ENSMUSG00000049128 ENSMUST00000053107 1 1 2 60 3 92375314 92375332 GGGTAAACAACTGGAAAGG 58 92375272 92375290 CTACTTCTCCTGCTGTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp697 ENSMUSG00000050064 ENSMUST00000056096 3 1 1 132 3 98229317 98229335 CACAGAAGATAGAGGCCAC 59 98231092 98231110 CCTTTCTTCCTCACTCAGC 59 NA DesignNoJunction Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000099981,ENSMUST00000070199 2 2 14 83 2 76674645 76674666 CCAAACAGTTGTTACAGAAGAG 59 76674463 76674604 GTTGTTTCAGACTCTTTGAGTG 59 NA Mus musculus 50 Rexo4 ENSMUSG00000052406 ENSMUST00000114019 1 1 3 128 2 26811079 26814007 GATTTAAAGAGTGGACGACC 58 26810072 26810090 TTTCACCATGACGTAAAGC 58 NA Mus musculus 50 Tln2 ENSMUSG00000052698 ENSMUST00000040025,ENSMUST00000039662,ENSMUST00000085405,ENSMUST00000034771 1 4 5 80 9 67120532 67123141 CAGCTCAGGAAATGATGAC 58 67120470 67120490 CATAGTCAGTGGTCATTTGTG 58 NA Mus musculus 50 Tcf4 ENSMUSG00000053477 ENSMUST00000114985,ENSMUST00000114982,ENSMUST00000078486,ENSMUST00000114980 3 4 7 105 18 69508790 69621526 CTGGCTCAAATGTAGAAGAC 58 69625021 69625039 GTCATGTGGTCATAGGGAG 59 NA Mus musculus 50 Pde5a ENSMUSG00000053965 ENSMUST00000066728,ENSMUST00000073213 3 2 2 82 3 122451381 122463800 AAAGATGCCTATGAGGATCC 58 122463842 122463863 GGCATACAAAGGATACTTTGTG 59 NA Mus musculus 50 Slc8a1 ENSMUSG00000054640 ENSMUST00000071424 2 1 4 92 17 81844857 81844875 TTCATTGAGATTGGAGAGC 57 81844269 81844287 TCTCATATTCCTCACGGTC 58 NA DesignNoJunction Mus musculus 50 EG433180 ENSMUSG00000055095 ENSMUST00000068473 1 1 1 60 18 44241980 44241999 GGAATAAATGTGCCTTCTGC 59 44243037 44243055 TGCTTCAGGTTGATCTTCC 59 NA DesignNoJunction Mus musculus 50 Zfp819 ENSMUSG00000055102 ENSMUST00000032661,ENSMUST00000116324 1 2 2 60 7 50867977 50867996 AGGTTGATTTCCCACATCAG 59 50871766 50871784 ATTTGGTGTGAGTCATGCT 59 NA DesignNoJunction Mus musculus 50 Zfp277 ENSMUSG00000055917 ENSMUST00000069692 3 1 2 86 12 41105449 41137170 TTCCTCAGACAGTAAAGACTG 59 41105383 41105402 GATGGAGACCCTTCTAAAGC 59 NA Mus musculus 50 Skap1 ENSMUSG00000057058 ENSMUST00000107663 3 1 7 87 11 96402730 96402748 CAATCTGAGTGGGACTCAC 59 96402798 96539264 TAGTAACCAAGGATGACCCT 59 NA Mus musculus 50 Cep170 ENSMUSG00000057335 ENSMUST00000057037,ENSMUST00000070119 1 2 2 89 1 178710518 178712391 AAACCCATGGATGTCTCTG 59 178710447 178710465 TCTTTGTTCATCCTCCTCG 58 NA Mus musculus 50 Pkn1 ENSMUSG00000057672 ENSMUST00000095082,ENSMUST00000109817,ENSMUST00000109818,ENSMUST00000005616 1 4 4 80 8 86204901 86204919 CTTCTTGGACAACGAGAGG 59 86201892 86204857 TTTCGGAAAGTGACCTCAG 59 NA Mus musculus 50 Camk2b ENSMUSG00000057897 ENSMUST00000093355,ENSMUST00000109812,ENSMUST00000066431,ENSMUST00000002817,ENSMUST00000101586 2 5 10 105 11 5888988 5889006 GGAGACTGTGGAATGTCTG 59 5882751 5888108 TAAACTCTTGGCTGCTGAG 59 NA Mus musculus 50 Usf2 ENSMUSG00000058239 ENSMUST00000058860,ENSMUST00000108119 3 2 2 83 7 31732039 31732058 AAGATCAACAACTGGATCGT 59 31731890 31731993 CCCTTTACTTGCTCCTGTC 59 NA Mus musculus 50 Arrb2 ENSMUSG00000060216 ENSMUST00000079056,ENSMUST00000108568,ENSMUST00000102564,ENSMUST00000084954,ENSMUST00000102563 2 5 5 80 11 70253395 70253672 AATTCGATACCAACTATGCC 57 70253715 70253733 CATCCTTCATTCCCTTCAG 57 NA Mus musculus 50 H3f3b ENSMUSG00000060743 ENSMUST00000081026,ENSMUST00000111079 2 2 2 60 1 182741930 182741950 GAAGAAACCTCATCGTTACAG 58 182740362 182740381 CTGATAGCGTCTGATTTCAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 NM_146484.1 ENSMUSG00000061501 ENSMUST00000080031 3 1 1 60 16 59185913 59185931 CAAACCCTTACTGTACCCA 58 59185871 59185890 CAAGACTAACAGACGAACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Kalrn ENSMUSG00000061751 ENSMUST00000089655,ENSMUST00000114960,ENSMUST00000114957,ENSMUST00000114954,ENSMUST00000114948,ENSMUST00000114953 2 6 13 63 16 34153587 34171371 TGGAAAGTGACAAGGATGG 59 34153542 34153560 GAGAAAGGATCTCCAGGTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Ssbp3 ENSMUSG00000061887 ENSMUST00000030367,ENSMUST00000097934,ENSMUST00000072753,ENSMUST00000106761 3 4 5 129 4 106585571 106585820 CTTATCAGAGATTCGATGGGA 58 106588288 106588307 TGAATGTTCACAAGTGTCTC 58 NA Mus musculus 50 Tcp11 ENSMUSG00000062859 ENSMUST00000042692,ENSMUST00000114836,ENSMUST00000043925 1 3 4 80 17 28206306 28206417 GAAGAGTTTCCTGAAACCC 57 28206244 28206262 AAGGATGGTTAGCTGACTC 58 NA Mus musculus 50 ENSMUSG00000063087 ENSMUSG00000063087 ENSMUST00000074702 1 1 1 75 18 5583039 5583057 TGTCTCATTCTGTTTCCGG 59 5567561 5567579 CTCTAACCTTCTCCTCCGT 59 NA DesignNoJunction Mus musculus 50 4930528G09Rik ENSMUSG00000064280 ENSMUST00000115245,ENSMUST00000035915 1 2 3 80 5 20814591 20815419 GCTCAACAGAAATCTCTGTC 58 20814530 20814551 CTCCTTTAGAAGTTTGTTCTCC 58 NA Mus musculus 50 BC023744 ENSMUSG00000066894 ENSMUST00000111967,ENSMUST00000086464 3 2 3 102 5 117794009 117798308 GTTGAGTGTGAAAGAACCG 58 117798373 117798392 GTAATACAGAGTGAGGCCTG 59 NA Mus musculus 50 Hist1h2bp ENSMUSG00000069308 ENSMUST00000110473 2 1 3 109 13 21879736 21879754 CTGTCACCAAGTACACCAG 59 21880958 21880977 TATTTATGTTGCAGCTTCCG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 OTTMUSG00000003605 ENSMUSG00000069609 ENSMUST00000092460,ENSMUST00000100240,ENSMUST00000100239 1 3 4 61 11 114884007 114884025 CAGGTGACTCAGAACTCTC 59 114882202 114882220 ATCAGCAAGAAGGAGATGC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Nlrp1a ENSMUSG00000069830 ENSMUST00000108519,ENSMUST00000048514 3 2 3 88 11 70922536 70922554 GTCCCTACGATGAACATGG 59 70921550 70922485 CATCCTACCATACCTGACTG 58 NA Mus musculus 50 Gmppb ENSMUSG00000070284 ENSMUST00000112295,ENSMUST00000047947 3 2 2 101 9 107952496 107952514 TTCTTCGTTCTCAACAGTG 57 107952579 107952790 CTTGGTAACCAAGATGGAG 57 NA Mus musculus 50 Art5 ENSMUSG00000070424 ENSMUST00000106940,ENSMUST00000106934 3 2 7 95 7 109246758 109246776 ATCCAACACCTTGTACTGG 59 109246387 109246405 ACCAAGAAGACTTCGTGTG 59 NA DesignNoJunction Mus musculus 50 Wfdc16 ENSMUSG00000070530 ENSMUST00000094345,ENSMUST00000109336 3 2 2 176 2 164461478 164461496 TTTAACAAGGCCCAAACTG 58 164460941 164460959 CTGATTGTATGGTTTGGCT 57 NA DesignNoJunction Mus musculus 50 C87414 ENSMUSG00000070686 ENSMUST00000101024 1 1 1 60 5 94066586 94066605 TACATGAATCAGGTCCTAGG 57 94065729 94065747 ATTGAGTGATGGAGAGGGT 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Ndufb6 ENSMUSG00000071014 ENSMUST00000095128 2 1 2 81 4 40224734 40224752 CTTCGCTGTTTCTCATGTG 59 40219873 40224690 GGTGTATGGTTTAGTAGCCA 59 NA Mus musculus 50 Gm628 ENSMUSG00000072487 ENSMUST00000071419,ENSMUST00000110021 3 2 2 80 15 73629352 73630529 ATCTCAAGAGGAGCTTCTC 58 73623196 73623214 TAGTAGGTGAACAGGAAGG 57 NA Mus musculus 50 EG432637 ENSMUSG00000073168 ENSMUST00000110973 3 1 2 181 12 22186146 22186365 TGTTATAGGCTACACTTGGG 58 22179381 22179399 CTTTGCCATTTCTCAGTCC 58 NA InUTR Mus musculus 50 Ttll9 ENSMUSG00000074673 ENSMUST00000099197,ENSMUST00000103155 3 2 3 105 2 152798067 152801906 GAGAGCAGAGAACCTTAATCC 59 152801972 152808802 CATTCGCCTTCATCTTTGAC 59 NA Nonspecific Mus musculus 50 TRAV6D-6 ENSMUSG00000076802 ENSMUST00000103613 1 1 1 61 14 53752523 53752541 CATGGAGATTCCGTGACTC 59 53752566 53752584 ATCAGGGACTTGCTTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV9D-4 ENSMUSG00000076815 ENSMUST00000103626 1 1 1 60 14 53914523 53914541 TCTGGTATGTCCAGTACCC 59 53914563 53914583 TCTCCTGAATAGTACTTGAGG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 NP_001092765.1 ENSMUSG00000078593 ENSMUST00000106492 1 1 1 93 4 115846103 115846121 GTATGTTCAAGTGTAGCCG 58 115846178 115846196 GTGTCACTGATGTTTGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 A2ARR5_MOUSE ENSMUSG00000078867 ENSMUST00000108956,ENSMUST00000108955 2 2 2 60 2 177174162 177174180 CTCTACAAAGGTGTGATGC 58 177173915 177174140 CCCAAATGTAACCTATAGCTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 A6NAU7_MOUSE ENSMUSG00000079398 ENSMUST00000112795,ENSMUST00000112794,ENSMUST00000112792 1 3 3 85 14 3951130 3951149 GAATGAAATGATCCAGTCCA 57 3951197 3951884 CCTCCTTAATGCTGTAGGA 58 NA Nonspecific Mus musculus 50 TRBJ2-3 ENSMUSG00000076494 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Ddx3x ENSMUSG00000000787 ENSMUST00000000804 1 1 1 80 X 12868116 12868135 TCTTGGTTAGAGAACATGGC 59 12868178 12868304 TCCACTAAATCGACTGCTC 59 NA Mus musculus 50 Dlg3 ENSMUSG00000000881 ENSMUST00000087984,ENSMUST00000113736,ENSMUST00000000901,ENSMUST00000113735 1 4 4 80 X 98008106 98008686 CGACAAGAAATTCACTATGCC 59 98008728 98008746 CTCAGAGATGAGGTCATCG 58 NA Mus musculus 50 Mcm3ap ENSMUSG00000001150 ENSMUST00000001178 2 1 1 81 10 75945558 75945871 ATACGGAAGGACATAACACAG 59 75945913 75945932 GAATGTGAAATCGGGTACAC 58 NA Mus musculus 50 Gria3 ENSMUSG00000001986 ENSMUST00000076349,ENSMUST00000115103 3 2 2 80 X 38949833 38949852 TCTCAGATCAACAAATCAGC 57 38949895 38951640 ATGGTGATTCCAGAATGGT 58 NA Mus musculus 50 Irf9 ENSMUSG00000002325 ENSMUST00000002396,ENSMUST00000053473 3 2 2 82 14 56226681 56227529 ACTTCTGTAGAGATTTGGCC 59 56227574 56227592 CTCCTCCCAGAAATGTAGG 58 NA Mus musculus 50 Pon1 ENSMUSG00000002588 ENSMUST00000002663 1 1 1 80 6 5127262 5127280 CCAGATAAAGTCCAGGTGG 59 5125814 5127221 ATAGACATACTTGCCATCAAGG 59 NA Mus musculus 50 Clcn3 ENSMUSG00000004319 ENSMUST00000093490,ENSMUST00000056508,ENSMUST00000110302,ENSMUST00000110301,ENSMUST00000004430,ENSMUST00000110300 2 6 6 81 8 63420106 63420125 GGTACCTACGATGATTTCCA 58 63417435 63420062 TACTGTTGATCCGTCTGTG 59 NA Mus musculus 50 Hfe ENSMUSG00000006611 ENSMUST00000091706,ENSMUST00000091707 2 2 4 105 13 23798705 23798723 AAACAGAACAGGGACTACC 58 23797988 23798636 CTTTCACCAAAGTAGGCAC 58 NA DesignNoJunction Mus musculus 50 1700008O03Rik ENSMUSG00000008028 ENSMUST00000008172 3 1 1 105 7 51616542 51618029 AGACTTCGGAAGACTTTACG 59 51616456 51616474 ATATTCTCGTAGCGGATGC 59 NA Nonspecific Mus musculus 50 Tex11 ENSMUSG00000009670 ENSMUST00000113718,ENSMUST00000009814,ENSMUST00000113716 3 3 3 80 X 98111917 98111936 GATCGTGGACTAATTGAAGC 58 98101535 98111874 CTGTCCATTCTCTAGAGCA 58 NA Mus musculus 50 2200002J24Rik ENSMUSG00000013083 ENSMUST00000013227 3 1 1 136 7 31484985 31485268 CTGTTCTCCCTTAAGACCC 58 31485368 31485386 AATCTAATAGAGCTGGCCA 57 NA DesignRelaxed Mus musculus 50 Slamf1 ENSMUSG00000015316 ENSMUST00000015460 1 1 1 80 1 173707445 173707464 TGTCAGCAGTATCTCTAGGA 59 173707507 173718086 ATCCATGGACTCGATTCTG 58 NA Mus musculus 50 Ppil4 ENSMUSG00000015757 ENSMUST00000015901 3 1 1 80 10 7515493 7515598 TCATACACAATGTACAGAGGG 59 7515638 7515658 CAAATATAGACTCTCCTCCGC 59 NA Mus musculus 50 Wt1 ENSMUSG00000016458 ENSMUST00000016602,ENSMUST00000111101,ENSMUST00000111100,ENSMUST00000111099,ENSMUST00000111098 2 5 5 92 2 105009202 105009220 TACCAGTGTGACTTCAAGG 58 105009276 105010096 GAATGGTTTCACACCTGTG 58 NA Mus musculus 50 Rnd3 ENSMUSG00000017144 ENSMUST00000017288 2 1 1 98 2 51003814 51004245 AAATTACGTCCCTACGGTG 59 50992756 51003753 TAAGGAGAACCTGAAGTGTC 58 NA Mus musculus 50 Wfdc15b ENSMUSG00000018211 ENSMUST00000018355,ENSMUST00000109376 3 2 2 96 2 164040916 164040934 TGATAAAGGCTGCAAGGAC 59 164040319 164040857 TCTCCGGTTTGTCTATTCTG 59 NA InUTR Mus musculus 50 Kcnab3 ENSMUSG00000018470 ENSMUST00000018614 1 1 1 80 11 69141774 69142014 CTCAGATCTCAGATGAGACAG 59 69142056 69142074 CTTCAGCAGTGTCAAACAG 58 NA Mus musculus 50 Kitl ENSMUSG00000019966 ENSMUST00000105283,ENSMUST00000099320 1 2 3 80 10 99542755 99543499 CCCGAGAAAGATTCCAGAG 59 99543543 99543561 GCTGTCATTCCTAAGGGAG 59 NA Nonspecific Mus musculus 50 Peli1 ENSMUSG00000020134 ENSMUST00000093290,ENSMUST00000101477 1 2 2 80 11 21042653 21046928 TGTTTCAGATTGGTCGGTC 59 21046971 21046990 CGGAATTACTCTGACTTCCA 59 NA Mus musculus 50 3010026O09Rik ENSMUSG00000020381 ENSMUST00000020647 2 1 1 116 11 50011192 50013042 ACTTTGAACACCAGGACTC 59 50013121 50013140 TTGGTAGTTTCCACCTAGGA 59 NA Mus musculus 50 Smtn ENSMUSG00000020439 ENSMUST00000075118,ENSMUST00000020721,ENSMUST00000110008 2 3 3 110 11 3422942 3424644 GATGGGCAGTATCTTCGAC 59 3422850 3422869 CTCTGTGCCTTCATTAACTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 2810021J22Rik ENSMUSG00000020491 ENSMUST00000108820,ENSMUST00000073924,ENSMUST00000093064 2 3 4 125 11 58690311 58692284 TGCTGTCCTTGAATCAGTG 59 58693433 58693451 GACTCTTCATAGGCTGCAG 59 NA Mus musculus 50 Mrpl22 ENSMUSG00000020514 ENSMUST00000020820 1 1 1 84 11 57986577 57986595 CATTTCTCGCAAATGGGAG 59 57986643 57988787 GTAAATTTCCGCTGGTCTC 58 NA Mus musculus 50 Rps6kb1 ENSMUSG00000020516 ENSMUST00000020824,ENSMUST00000058286,ENSMUST00000108034 1 3 3 80 11 86333441 86333460 ATTGTGGACCTGATTTATGC 58 86331129 86333400 AAATAGTTCTCCTCCACTGAG 58 NA Mus musculus 50 4933425L03Rik ENSMUSG00000020576 ENSMUST00000042953 1 1 1 81 12 13481031 13489197 TCAGTGAGAGTGGTTTGTC 59 13489241 13489260 GGATCTGTCTTCAAAGTGTC 58 NA Mus musculus 50 Hs1bp3 ENSMUSG00000020605 ENSMUST00000020927 2 1 1 87 12 8324678 8324696 GTACCAGATCCTAGTGGTG 58 8324746 8328333 TTTAGAGACCAAGAACTGGA 57 NA Mus musculus 50 Smc6 ENSMUSG00000020608 ENSMUST00000020931 3 1 1 81 12 11296790 11296808 ATACAGTCAATCAGGAGGC 58 11296853 11297527 TCTTCTTTCCTAACTCGGC 58 NA Mus musculus 50 Pxdn ENSMUSG00000020674 ENSMUST00000021008 2 1 1 80 12 30675864 30678247 ATTGTACAAGCCCTTCCTC 59 30678291 30678309 ACACTGGAAATCCACAGTC 59 NA Mus musculus 50 Cacng1 ENSMUSG00000020722 ENSMUST00000021065 3 1 1 65 11 107565742 107567095 AAAGGAGTACAGCATCTCAG 59 107565696 107565714 GAACCCACAATGATGAAGC 59 NA DesignNoJunction Mus musculus 50 Ube2g1 ENSMUSG00000020794 ENSMUST00000021148 2 1 1 82 11 72476602 72476621 TCAGCAGGTTTAATAGACGA 58 72476663 72486470 CCACCTTCATAAAGTGTATCTG 58 NA Mus musculus 50 Erh ENSMUSG00000021131 ENSMUST00000021559 2 1 1 60 12 81735510 81738490 CTCAGCTGTCTGGTTTACC 59 81735468 81735487 TCCAGTCTTTGTTATACGGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Slc10a1 ENSMUSG00000021135 ENSMUST00000095572 2 1 1 109 12 82057096 82059018 CTAAATCCAAGCTGCAGAC 58 82057005 82057023 AGTGGTCCAATGACTTCAG 59 NA Mus musculus 50 1110018J18Rik ENSMUSG00000021482 ENSMUST00000021938,ENSMUST00000099434 1 2 2 110 13 64410226 64410409 CATATTGAGCCTTTCTGCA 57 64410134 64410153 GGAGGAAATTTCTTCACCTC 58 NA Mus musculus 50 Ddx41 ENSMUSG00000021494 ENSMUST00000021956 2 1 1 83 13 55635672 55635789 GCATCCCTACCATTCTGTC 59 55635607 55635625 CTGGCAGAGTGAATACCAG 59 NA Mus musculus 50 Adcy2 ENSMUSG00000021536 ENSMUST00000022013 2 1 1 80 13 68866674 68866693 CAGAGAATGGGAAGATTAGC 57 68859650 68863149 GTGACTTAGTTCTTAAGGTGC 58 NA Mus musculus 50 Ppp3cb ENSMUSG00000021816 ENSMUST00000022355 2 1 1 86 14 21350287 21350897 GAAGCTCCAATTACAGTGTG 58 21350220 21350238 ATTAGCAGGTGATCCTCCT 59 NA Mus musculus 50 C130032J12Rik ENSMUSG00000021840 ENSMUST00000043494 1 1 1 71 14 47930102 47930120 CTACCTGAACAGTCCTCTG 58 47930155 47930173 CCACCCTTGAGAAGAATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gata4 ENSMUSG00000021944 ENSMUST00000067417 3 1 1 187 14 63822149 63822168 ATAAATCTAAGACGCCAGCA 59 63819377 63820321 AGTACTGAATGTCTGGGAC 58 NA Mus musculus 50 Tkt ENSMUSG00000021957 ENSMUST00000022529 1 1 1 80 14 31380239 31381360 GATCACAGGGATTGAAGAC 57 31381404 31381422 ATCTCCTGGATAATCTGCT 57 NA Mus musculus 50 Adamdec1 ENSMUSG00000022057 ENSMUST00000022641 1 1 1 80 14 69195213 69195918 CTCAGGATGTGAAACCCTG 59 69195151 69195170 CATCACAGGTACTGATCCTG 59 NA Mus musculus 50 Gpc5 ENSMUSG00000022112 ENSMUST00000022707 2 1 1 81 14 116187541 116923507 GAAGATCACAAACTGGATGC 59 116923550 116923569 CAGAGTACTTCCATGGTCTG 59 NA Mus musculus 50 Tgm1 ENSMUSG00000022218 ENSMUST00000002389 1 1 1 80 14 56324821 56325284 TTGCTGAGGTAAATAGCGA 58 56324759 56324777 CTTTCTCTTCCACGTACAC 57 NA Mus musculus 50 4930447A16Rik ENSMUSG00000022288 ENSMUST00000022897 2 1 1 95 15 37355550 37355568 AGGGATTTCTGGCAAAGAG 59 37359601 37369287 ATCTTCATCACTTGAGTGGTC 59 NA Mus musculus 50 Stk3 ENSMUSG00000022329 ENSMUST00000018476,ENSMUST00000067033 2 2 2 83 15 35002868 35002886 AAAGCCGGGAATATTCTCC 59 35002344 35002823 CATTGTATCTGTTAACTGGCC 59 NA Mus musculus 50 Nit2 ENSMUSG00000022751 ENSMUST00000023432 2 1 1 80 16 57161311 57161817 CACATTTGATACGCCTTACTG 59 57161251 57161270 GCATAGATTTGTGCAAGCTC 59 NA Mus musculus 50 C230021P08Rik ENSMUSG00000023009 ENSMUST00000023747 1 1 1 85 15 99263251 99263889 TACTGAACCAGAAGGACCT 59 99263184 99263202 ACTCAACACCTGATTCTGC 59 NA Mus musculus 50 Lnpep ENSMUSG00000023845 ENSMUST00000041047 3 1 1 80 17 17705334 17705353 CTAAATGAAGGCTTTGCCAC 59 17703767 17705294 GAAGTCTTCATAACTGTTGAGC 59 NA Mus musculus 50 Cpne5 ENSMUSG00000024008 ENSMUST00000024805,ENSMUST00000057091 2 2 2 80 17 29303666 29303686 CTTCCTGGATTACATCAAAGG 58 29299370 29301627 GAGGGATTCCCATTAGAGG 58 NA Mus musculus 50 Mllt1 ENSMUSG00000024212 ENSMUST00000025053 2 1 1 103 17 57034152 57034262 TATGACAAGGCTTACACGG 59 57033991 57034010 GTCTCCTCGATCAGATTGAC 59 NA Mus musculus 50 Lyzl1 ENSMUSG00000024233 ENSMUST00000025076 2 1 1 82 18 4181175 4181906 AAGGGATGAACTATTGGCAG 59 4181951 4181969 GGAAACCTCACATCCTCTC 59 NA Mus musculus 50 Myot ENSMUSG00000024471 ENSMUST00000115498,ENSMUST00000025349 1 2 2 80 18 44496901 44496922 GTTCTATATTACCGTCTCAACC 58 44496961 44500973 CTGAGGATTGTTGATAGTTGG 58 NA Mus musculus 50 Stambpl1 ENSMUSG00000024776 ENSMUST00000054956 3 1 1 80 19 34308738 34308758 CAATTTCGCTAACTACTCTCC 58 34308800 34309709 ACCACCAAATTCTGAACAG 57 NA Mus musculus 50 Chka ENSMUSG00000024843 ENSMUST00000025760,ENSMUST00000072055 3 2 3 84 19 3892716 3892734 TCTTGCCTCTCATTTCCTC 58 3892782 3893356 GGCATATTCCATGTACCCA 59 NA Mus musculus 50 Rbp4 ENSMUSG00000024990 ENSMUST00000112335,ENSMUST00000025951 2 2 2 115 19 38191391 38192772 TGAACACAATGGTTACTGTC 58 38191295 38191316 GATAAATAGAGATGAAGACCGG 57 NA InUTR Mus musculus 50 Gyk ENSMUSG00000025059 ENSMUST00000113978,ENSMUST00000026039,ENSMUST00000069684,ENSMUST00000081161 1 4 4 80 X 82956464 82957692 TCAATGCTGAAGAAAGCGA 59 82956402 82956420 ACTGAGTTGTAACCCAACC 59 NA Mus musculus 50 Abhd6 ENSMUSG00000025277 ENSMUST00000026313 2 1 1 80 14 8860891 8872270 GAATCTATTATTGGTACTGGCG 58 8872308 8872329 AGTAACAGAACTGATAGTCCTC 58 NA Mus musculus 50 Nab2 ENSMUSG00000025402 ENSMUST00000026469,ENSMUST00000099157,ENSMUST00000105248,ENSMUST00000099156 2 4 4 60 10 127102067 127102085 GGAGGAGATGATGTACAGC 59 127102025 127102043 CCATGATTTCCAGGAACTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rnf165 ENSMUSG00000025427 ENSMUST00000026494 2 1 1 80 18 77701722 77705428 CAAGTATAAGAAGCGAAGACC 58 77701662 77701681 GTGCATTTCTCATCTGTGTC 59 NA Mus musculus 50 Zfp202 ENSMUSG00000025602 ENSMUST00000026693 1 1 1 92 9 40017403 40017421 AGTGATCTGGATCCAACAC 58 40017476 40018039 GGGAATTGGAAATGACAGAG 58 NA Mus musculus 50 Sec61a2 ENSMUSG00000025816 ENSMUST00000102981,ENSMUST00000026925,ENSMUST00000026926,ENSMUST00000114951 2 4 4 80 2 5807618 5812348 AGTATGCTGTCAGATTCCG 59 5807556 5807576 GCAAGAATAACTCTCATCCAG 58 NA Mus musculus 50 Dst ENSMUSG00000026131 ENSMUST00000027309 3 1 8 141 1 34217303 34217324 CTGCATTAGCTTCAGTAATGAG 59 34217548 34217857 TTTGGAATCAGACTGGAGAG 59 NA Mus musculus 50 Tmem169 ENSMUSG00000026188 ENSMUST00000027380 3 1 1 115 1 72344726 72344744 ACTTCCTGGACTATCCTGG 59 72347328 72347346 GATATCCACCATCTGACCC 58 NA DesignNoJunction Mus musculus 50 Abcb6 ENSMUSG00000026198 ENSMUST00000027396 2 1 1 80 1 75174330 75174504 GGGACATTGTGAACTTACTG 58 75174269 75174288 ACTTGAGGAAGACATAGGTG 58 NA Mus musculus 50 Ecel1 ENSMUSG00000026247 ENSMUST00000027463 1 1 1 80 1 89047572 89047724 GACAAAGAATATGAGTTCGAGG 58 89047513 89047532 CAACTGGATACTGAATCGGA 59 NA Mus musculus 50 Steap3 ENSMUSG00000026389 ENSMUST00000112643 2 1 5 274 1 122166725 122166743 AGTCACCAGAGAAGAAAGG 58 122140612 122140630 AGTCACTTGAGCTAAGGAG 58 NA DesignNoJunction Mus musculus 50 Elk4 ENSMUSG00000026436 ENSMUST00000086556,ENSMUST00000027696 2 2 2 159 1 133915012 133915030 GTCTCTTACACCAGCACTC 59 133916040 133920144 GAGTACAGAGGGAAACTGG 58 NA Mus musculus 50 Sec16b ENSMUSG00000026589 ENSMUST00000086130,ENSMUST00000027881,ENSMUST00000111700 2 3 3 80 1 159459622 159461415 CACCTGTACTCAAGGTCAG 59 159461458 159461477 TCCATAAGCATACTCATCCC 58 NA Mus musculus 50 Ralgps2 ENSMUSG00000026594 ENSMUST00000063199,ENSMUST00000027886 1 2 2 80 1 158749989 158750009 GGAGCTGTTACTATTCAAGGT 59 158747950 158749947 TGTCCAAGATGCTACTGTG 59 NA Mus musculus 50 Stam ENSMUSG00000026718 ENSMUST00000102960,ENSMUST00000028050,ENSMUST00000114738 1 3 3 80 2 14024046 14024064 TGAATACTGCTGAGGACTG 58 14024107 14037457 GACAATCTTTAGGTCCTGTG 57 NA Mus musculus 50 Spopl ENSMUSG00000026771 ENSMUST00000028110,ENSMUST00000114501 3 2 2 88 2 23392982 23393000 TCATAAGTCTGTGCTTGCA 59 23373459 23392854 TTTCCACTCGATTCTTTGTG 58 NA Mus musculus 50 5730472N09Rik ENSMUSG00000026858 ENSMUST00000077977,ENSMUST00000100214,ENSMUST00000116543 1 3 4 80 2 30225862 30225880 ACTCTTAGTGGCATCTCCT 59 30225924 30226649 ATTGACCACTACCATCGAG 58 NA Mus musculus 50 D730039F16Rik ENSMUSG00000026870 ENSMUST00000028228 3 1 3 103 2 34741403 34741422 TAAGAAGATGGCTTCGTCTG 59 34743306 34743651 TCTTTATTAGCAGTGAGACCTC 59 NA Mus musculus 50 Hnmt ENSMUSG00000026986 ENSMUST00000051416,ENSMUST00000114498,ENSMUST00000114497 1 3 3 86 2 23859465 23864537 TTGTGTCAGGAACTAGTGG 58 23859397 23859415 ATGTGACATACTGGCAGAG 59 NA Mus musculus 50 Rtf1 ENSMUSG00000027304 ENSMUST00000028767 2 1 2 80 2 119556472 119558143 AAGGAAATGAGCAAGGGTC 59 119558187 119558205 TTTGAACAGGTCTTCCGAG 59 NA Mus musculus 50 Rrbp1 ENSMUSG00000027422 ENSMUST00000110035 3 1 5 72 2 143814177 143814261 GGACCCAGAACAGAAAGAC 59 143814123 143814141 TTCACCTGGTTTGAGACAC 59 NA DesignRelaxed Mus musculus 50 Rae1 ENSMUSG00000027509 ENSMUST00000029013 1 1 1 80 2 172833578 172833598 GACCATACATTGGATCAAAGC 59 172833638 172833755 GTATCCCAGAACTTCAGAGTC 59 NA Mus musculus 50 Nfatc2 ENSMUSG00000027544 ENSMUST00000109184,ENSMUST00000074618,ENSMUST00000109186,ENSMUST00000099068 3 4 7 111 2 168332865 168348750 GAGAAGACTACAGATGGGC 59 168332452 168332470 TGTGCTTGTTCCGATACTC 59 NA Mus musculus 50 Eif2a ENSMUSG00000027810 ENSMUST00000029387 2 1 1 80 3 58348975 58349153 AACCCAACCTTATAAGGTGG 59 58349195 58349214 TTGGGATACTGATACAGTCG 58 NA Mus musculus 50 Sypl2 ENSMUSG00000027887 ENSMUST00000029486 1 1 1 92 3 108020699 108021969 TATCCCTTCAGGTTGTACCA 59 108020626 108020644 AGAGAAGTCTCCCATGAGG 59 NA Mus musculus 50 A630047E20Rik ENSMUSG00000028030 ENSMUST00000029664 1 1 1 80 3 132395158 132395177 GGAAAGAAGCAAGAGTTGAC 59 132395220 132397320 GAATAGCTCCCTCAACTCC 59 NA Mus musculus 50 Cisd2 ENSMUSG00000028165 ENSMUST00000029815 2 1 1 76 3 135074006 135074024 ATCTGTGTCTCACCAAAGC 59 135071828 135071847 ATTATGGGATCCATCACAGG 58 NA DesignNoJunction Mus musculus 50 Gtf2b ENSMUSG00000028271 ENSMUST00000029938 1 1 1 97 3 142441277 142442662 ATGATTGGCAAGGGTACAG 59 142442723 142442741 ATCATTGCTCGATCAGAGC 59 NA Mus musculus 50 Hemgn ENSMUSG00000028332 ENSMUST00000071096,ENSMUST00000107764 3 2 2 93 4 46413621 46413641 ATCTTGGAGTCTGAGAAACAG 59 46409924 46413566 TTTCTGTTCTCCAAGGAGC 59 NA Mus musculus 50 Orc1l ENSMUSG00000028587 ENSMUST00000102744,ENSMUST00000075835 3 2 2 80 4 108270069 108271933 AGTATACATTAGGAGGAAGGC 58 108271974 108271993 GAACTCTTTCTATGGACACG 57 NA Mus musculus 50 3110037I16Rik ENSMUSG00000028629 ENSMUST00000030375 3 1 1 60 4 120594404 120594422 CTCCCAGCTATTGATACCC 58 120594362 120594380 CCAGTATAGTGGCAGTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cda ENSMUSG00000028755 ENSMUST00000030535 1 1 1 177 4 137899471 137907108 CCATCTCTAGTGACTTGCA 58 137894806 137894824 ATCTTCTGCAGGTCTTCAG 58 NA Mus musculus 50 Epb4.1 ENSMUSG00000028906 ENSMUST00000105975,ENSMUST00000105970,ENSMUST00000105974,ENSMUST00000054917,ENSMUST00000105982,ENSMUST00000105981,ENSMUST00000105980,ENSMUST00000084253,ENSMUST00000105979,ENSMUST00000097859,ENSMUST00000030739,ENSMUST00000097858,ENSMUST00000105972,ENSMUST0 3 14 14 81 4 131530766 131531465 ACACGTTCTTCAGACTCAC 59 131530703 131530722 CCACTGTATCGGAATTTGGA 59 NA Mus musculus 50 Sfrs8 ENSMUSG00000029439 ENSMUST00000053737,ENSMUST00000031394 2 2 2 218 5 130076415 130076887 ATAACTCAGGATCTCATGGC 58 130077068 130077086 GATAGCTGCATGTAGGTCG 59 NA DesignRelaxed, InUTR Mus musculus 50 Ung ENSMUSG00000029591 ENSMUST00000031587,ENSMUST00000102584,ENSMUST00000112275 3 3 3 118 5 114587326 114588248 AGTGTCATTGACAGGAAGC 59 114588330 114588348 TTCTGGAGCAGTTCATTGG 59 NA Mus musculus 50 Sds ENSMUSG00000029597 ENSMUST00000066540 3 1 1 181 5 120931649 120931667 ATCAAGGAAGGAAAGCTGG 59 120933194 120933597 AGAATCTTCTCATCGTCCAC 59 NA Mus musculus 50 Rasal1 ENSMUSG00000029602 ENSMUST00000031606,ENSMUST00000111871 1 2 2 82 5 121114506 121114759 AACAGTTCATGAAGCTCGT 59 121114805 121114823 TTTCTTCTCCTCGAAGACG 59 NA Mus musculus 50 Wnt16 ENSMUSG00000029671 ENSMUST00000031681 1 1 2 60 6 22241164 22241183 TGCTAGCCATGAATCTACAC 59 22247768 22247786 GACATTAACTTGGCGACAG 58 NA DesignNoJunction Mus musculus 50 Sspo ENSMUSG00000029797 ENSMUST00000043676 3 1 1 81 6 48404082 48404690 CAGATACTCAGGAGCTGTG 59 48404734 48404753 CCAGGAAATATTGAAGCCCT 59 NA Mus musculus 50 Dfna5 ENSMUSG00000029821 ENSMUST00000031845 3 1 1 81 6 50179339 50179357 CGTGATTTCTGAGCATGTG 59 50177390 50179294 TGCTGACACCTGTATAGTC 58 NA Mus musculus 50 MGI:2685314 ENSMUSG00000029847 ENSMUST00000044387 2 1 1 163 6 34907006 34907024 AGATGCTAGTGGGTTTCTC 58 34905975 34906879 GATGAGGAAGATGGTCAGG 59 NA Mus musculus 50 Casp2 ENSMUSG00000029863 ENSMUST00000031895 1 1 1 80 6 42226720 42226739 CAATGCTAACTGTCCAAGTC 58 42226781 42229791 CCTCTATCTGTCTCATCTCC 58 NA Mus musculus 50 Gcs1 ENSMUSG00000030036 ENSMUST00000032114 3 1 1 88 6 83066745 83066763 AGTGAACTTGGTGACTTCC 59 83066815 83066985 CAGAAGACATTGTAGCTGC 58 NA Mus musculus 50 Rab43 ENSMUSG00000030055 ENSMUST00000078647,ENSMUST00000113625,ENSMUST00000032134 2 3 3 195 6 87744772 87744790 TACAGATTTGGGACACAGC 59 87742822 87744614 TCTGACTTGTTCCCAATCAG 59 NA Mus musculus 50 Akap3 ENSMUSG00000030344 ENSMUST00000095440 2 1 1 82 6 126807217 126810278 ATCCTCAATAAGGATGGCG 59 126810324 126810342 CTCCAGGTGAATAGACACC 59 NA InUTR Mus musculus 50 Lypd5 ENSMUSG00000030484 ENSMUST00000032683 2 1 1 200 7 25137599 25137617 AACAGCAACCTCAAGACTC 59 25138111 25138457 GAAGTTGCCAATGTTCATCC 59 NA DesignNoJunction Mus musculus 50 Kctd13 ENSMUSG00000030685 ENSMUST00000032924 2 1 1 101 7 134085067 134085668 TCTTACACCAGCACTTCAG 59 134085733 134085751 GACATCCTTGAGGAAGAGC 59 NA Mus musculus 50 Fchsd2 ENSMUSG00000030691 ENSMUST00000032931,ENSMUST00000098250 3 2 2 80 7 108259341 108287675 AAGACATGAGGACTTTCAGTC 59 108325663 108325682 ATTGACTAGCCAACTTCTGG 59 NA Mus musculus 50 Rbbp6 ENSMUSG00000030779 ENSMUST00000106453,ENSMUST00000098062,ENSMUST00000052135,ENSMUST00000071590 2 4 4 122 7 130114641 130119469 GAATACACTGATGACAATGCG 59 130122093 130122111 CATCACTGGTTCAGTTCGA 59 NA DesignNoJunction Mus musculus 50 Nucb1 ENSMUSG00000030824 ENSMUST00000033096 2 1 1 80 7 52758598 52758616 ATCAACGTGCTAGAGACAG 59 52757074 52758556 CAGCTTTCCACTCTTAATGTC 58 NA Mus musculus 50 Tsx ENSMUSG00000031329 ENSMUST00000033691 2 1 1 80 X 100613565 100613584 ACCTGCAAGATATTCTTCAG 57 100613627 100615854 CATCTTCAGTACATCCAGC 57 NA Mus musculus 50 Plxna3 ENSMUSG00000031398 ENSMUST00000004326 3 1 1 80 X 71587079 71587269 GGTGGAGAGGTACTATCGA 59 71587313 71587331 GACTGCTCCACTAAGTAGG 58 NA Mus musculus 50 Wrn ENSMUSG00000031583 ENSMUST00000033990,ENSMUST00000033991 3 2 2 80 8 34454158 34462557 TGAAGACATTAGCATGCGT 59 34454096 34454114 TTCCCTGGCTTGTATATGG 58 NA Mus musculus 50 Hpgd ENSMUSG00000031613 ENSMUST00000034026 2 1 1 103 8 58777174 58777192 ACCATTTCGGAAGATTGGA 58 58777258 58786408 CCCACTGATAACAGAAACCA 59 NA DesignNoJunction Mus musculus 50 Cntnap4 ENSMUSG00000031772 ENSMUST00000034225,ENSMUST00000079307 1 2 2 80 8 115382182 115383015 TCTTCGTGGAGATTGATGAG 59 115383057 115383076 CCAAAGATTTGACTGCACTG 59 NA Mus musculus 50 Ctrl ENSMUSG00000031896 ENSMUST00000034368 3 1 1 85 8 108456747 108456765 TCTTCCAATGCTGAACCTG 59 108456544 108456562 TCATTGTTCATGGTGTTGG 58 NA DesignNoJunction Mus musculus 50 1600029D21Rik ENSMUSG00000032068 ENSMUST00000034572 2 1 2 145 9 50307390 50309181 TAAAGTCAACCTGCAGGTC 59 50309883 50309901 CAGAGTTGACCAGAGTGAG 59 NA Mus musculus 50 Brunol6 ENSMUSG00000032297 ENSMUST00000034840 2 1 1 105 9 59452823 59452842 TTTCAAATCGGCATGAAGAG 58 59452909 59453795 CTTCAGTTTCTGTCTGTGAC 58 NA InUTR Mus musculus 50 Pygm ENSMUSG00000032648 ENSMUST00000113483,ENSMUST00000035269 1 2 2 84 19 6392982 6393726 TGAGAAAGTTATTCCCGCC 59 6393774 6393792 GAACTTCATGTTGCCAGTG 59 NA Mus musculus 50 Slc16a8 ENSMUSG00000032988 ENSMUST00000039752 3 1 1 60 15 79084415 79084433 CTCCGAAGTGAAGTTTCCA 59 79084235 79084391 CATTGCTTCTGCTTCTTCC 59 NA DesignRelaxed, InUTR Mus musculus 50 Foxj3 ENSMUSG00000032998 ENSMUST00000044564,ENSMUST00000106310 1 2 2 80 4 119295950 119295968 TAATGTTCCGCAGAATGTC 57 119296012 119297514 ATGTACAAATTTCCTGCCC 57 NA Mus musculus 50 Angptl1 ENSMUSG00000033544 ENSMUST00000027885 1 1 2 80 1 158775540 158787217 GACTTTCATCAATGAAGGACC 58 158787258 158787277 ATCATGTAAATTCCACTGGC 58 NA Mus musculus 50 Map3k13 ENSMUSG00000033618 ENSMUST00000042065 2 1 1 81 16 21906611 21908741 TTACTTCAAGTCTCAGGCTG 59 21908784 21908803 GTGTATACAGGTCCCTTCAC 59 NA Mus musculus 50 Foxn3 ENSMUSG00000033713 ENSMUST00000046859,ENSMUST00000085108 2 2 2 115 12 100579735 100626579 AGGAGTCAGAGTATTGGGA 58 100579638 100579656 TAAGCCTGAGGAGTAGGAG 59 NA Mus musculus 50 Emx1 ENSMUSG00000033726 ENSMUST00000045942 3 1 1 131 6 85144146 85144164 AGAAGAATCACTACGTGGT 57 85153945 85153963 CTTCCTCTTCCAGCTTCTG 59 NA DesignNoJunction Mus musculus 50 1700018A14Rik ENSMUSG00000033993 ENSMUST00000037090 2 1 1 133 18 46359019 46359038 GCACTTAAAGTATGTTCCGG 58 46359134 46359152 CTTGATTCCAATCCTTGGC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rxfp1 ENSMUSG00000034009 ENSMUST00000078527 1 1 1 100 3 79471604 79471712 GGAATGGCTGATAATTGAAGAC 59 79470406 79470424 GGGCATTATTCATCAGCAC 58 NA Mus musculus 50 1700106J16Rik ENSMUSG00000034031 ENSMUST00000037268 2 1 1 60 11 88107736 88107754 GACTTGGAGATCCTACAGC 59 88107778 88107796 CCTTGAAGTCCTCCAACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cobll1 ENSMUSG00000034903 ENSMUST00000090894 1 1 9 80 2 64989035 64989053 TACTACTGTTCATGGCAGG 58 64988973 64988991 CACAGTGGTTTCAATGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnk15 ENSMUSG00000035238 ENSMUST00000109396,ENSMUST00000044798 3 2 2 108 2 163684210 163684228 ACTGCTTCATCACTCTCAC 59 163684300 163684318 ATGTAGAGGAAGCTGAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Iqcg ENSMUSG00000035578 ENSMUST00000115100 2 1 1 60 16 33030893 33030912 GACCCAGAAGAAATGTAACC 58 33029167 33030870 CCTCAGTTTCTCAATCTCC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Gmip ENSMUSG00000036246 ENSMUST00000036074 3 1 1 82 8 72334751 72335067 CCTCACAGAGGAAGAACTG 59 72335112 72335131 TCCATGCTTTAGCATACTCC 59 NA Mus musculus 50 4932432K03Rik ENSMUSG00000036291 ENSMUST00000037473 2 1 1 81 14 49699985 49700005 CAAACTCCATGAAAGTGTGAG 59 49700048 49700526 ATGGGTAATTGGACCTCTG 58 NA Mus musculus 50 AW061290 ENSMUSG00000036368 ENSMUST00000040368,ENSMUST00000112443 2 2 2 81 17 80049803 80051045 ACCACAAGGAGAAGTTTAGTG 59 80051084 80051106 GTGGATAGATCATACATGTCTCC 59 NA Mus musculus 50 Unc84a ENSMUSG00000036817 ENSMUST00000058716,ENSMUST00000078690 1 2 5 194 5 139707184 139709436 CTATACAGGTGACCTCTTGG 58 139709923 139709942 AGAAGAAAGACATTCAGCCA 59 NA Mus musculus 50 Zfp157 ENSMUSG00000036898 ENSMUST00000085856 3 1 1 80 5 138888769 138888788 ATCTTAAGGTTGGAGCATGG 59 138888831 138896221 AACTTCAAGAACACCTGGG 59 NA Nonspecific Mus musculus 50 Nxt1 ENSMUSG00000036992 ENSMUST00000109961 1 1 2 96 2 148500318 148501019 AGGAAAGCAGACTTCAGTC 59 148501078 148501097 CTTGAAATCTACTGATGCCA 57 NA DesignNoJunction, InUTR Mus musculus 50 Pank2 ENSMUSG00000037514 ENSMUST00000110195 2 1 4 85 2 131099928 131099946 TTCTCAAGTCTCCACACTG 58 131099994 131119148 ACCTGGTTAATGTTTGTGAG 58 NA Mus musculus 50 Nr0b2 ENSMUSG00000037583 ENSMUST00000042706 1 1 1 75 4 133109810 133109828 GTCTTTCTGGAGCCTTGAG 59 133109867 133111914 CACATCTGGGTTGAAGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Iars ENSMUSG00000037851 ENSMUST00000047363 1 1 1 80 13 49798566 49798584 GTCGACCACTATGTGAAGG 59 49798628 49799654 GACACGATGATCATCAGCA 59 NA Mus musculus 50 Cdkn2aip ENSMUSG00000038069 ENSMUST00000038738 1 1 1 240 8 48797644 48798255 ATCAAGTAGCAATGAAGGG 57 48797422 48797440 TCTGTCTCCTTCACTTGTG 58 NA DesignRelaxed Mus musculus 50 Atg5 ENSMUSG00000038160 ENSMUST00000039286 3 1 1 87 10 44005989 44009673 GCAGAACCATACTATTTGCT 57 44009722 44009741 TCATAACCTTCTGAAAGTGC 57 NA Mus musculus 50 Pde4dip ENSMUSG00000038170 ENSMUST00000090750,ENSMUST00000107038,ENSMUST00000045243 1 3 3 80 3 97551736 97551754 GTTCATCTCTAACCAGCCA 58 97551508 97551694 ATCTGCATAGAACCTTGATCG 59 NA Mus musculus 50 2010305C02Rik ENSMUSG00000038217 ENSMUST00000108435,ENSMUST00000043598 1 2 2 82 11 75282068 75282086 GTTTCCTCAAATGGTCACC 58 75282132 75282352 CGAAATAACCCACTGACAC 58 NA Mus musculus 50 Pbx3 ENSMUSG00000038718 ENSMUST00000040638,ENSMUST00000113132,ENSMUST00000113133,ENSMUST00000113131 3 4 4 80 2 34033857 34060313 TCACAGTATCACAGGTATCC 58 34033796 34033814 CCTCCTCTTGAAATTTGCC 58 NA Mus musculus 50 Trhr ENSMUSG00000038760 ENSMUST00000110289,ENSMUST00000038856 1 2 2 120 15 44060979 44060997 TGTCATCAAGGAGTCAGAC 58 44061081 44065016 TCTTTAGTTCTCAGAGGCC 58 NA InUTR Mus musculus 50 9630058J23Rik ENSMUSG00000038949 ENSMUST00000040706 2 1 1 80 1 181531853 181534659 GGAAGAGGACTATGAGAAAGC 59 181534701 181534719 GCAGAAAGATTTGCAAGCA 59 NA Mus musculus 50 Ppp1r9b ENSMUSG00000038976 ENSMUST00000038696,ENSMUST00000107748 3 2 2 94 11 94862659 94863164 TGATGAGGAGACAGGAGAG 59 94863220 94863240 CTAGTTCAAACACCTCAATGG 58 NA Mus musculus 50 Tnfsf10 ENSMUSG00000039304 ENSMUST00000046383 2 1 1 81 3 27224979 27227979 AGCTCATTGAAGAGGTGAC 59 27232992 27233010 AAGGGAGGAGTACTTAGCT 58 NA Mus musculus 50 Hs3st6 ENSMUSG00000039628 ENSMUST00000044922 2 1 1 60 17 24895277 24895295 GTGTACAGGACTTTCTGGG 59 24895319 24895337 GCATTGAAGTAGAAGTGCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ckap5 ENSMUSG00000040549 ENSMUST00000111338,ENSMUST00000046769,ENSMUST00000099716,ENSMUST00000111337 2 4 4 80 2 91416220 91416327 CAACAAATCCTGCTGTGAG 59 91416370 91416389 TCATTCTCAAAGAAGGACCA 58 NA Mus musculus 50 Nrl ENSMUSG00000040632 ENSMUST00000111404,ENSMUST00000062232 3 2 2 117 14 56141080 56141098 GAGGAGCTATATTGGCTGG 59 56140981 56140999 CTTCCATAGAGACAGGACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Appl1 ENSMUSG00000040760 ENSMUST00000036570 2 1 1 88 14 27778102 27778120 TGAAGAAGATGCTACTGCT 58 27776880 27778051 CACTCAATTCATTCTGTGCA 58 NA Mus musculus 50 Map6d1 ENSMUSG00000041205 ENSMUST00000040880 1 1 1 141 16 20236762 20241009 TAGACAGGAATTCCAAGCT 57 20236092 20236110 GAATTTCCTCACCTCTGGA 58 NA DesignNoJunction Mus musculus 50 Kcnj1 ENSMUSG00000041248 ENSMUST00000047334 2 1 1 60 9 32204896 32204914 AACTTTGGTAAGACGGTGG 59 32204936 32204956 TCTCATTATAGAGGCACATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rbp3 ENSMUSG00000041534 ENSMUST00000035695 3 1 1 104 14 34771857 34773745 ATCGACATGAGGTTCAACC 59 34773812 34773831 GTTGTAGATCTTGTCCAGCA 59 NA Mus musculus 50 Mmp1b ENSMUSG00000041620 ENSMUST00000047888 1 1 1 80 9 7370851 7384665 TAAAGACAGGTTCTACATTCGG 59 7370792 7370811 AGATTTGGCCAGATAAGGTC 59 NA Mus musculus 50 Lrrc29 ENSMUSG00000041679 ENSMUST00000070508 1 1 1 121 8 107837038 107837056 TGACATTGAGTCACTGCAG 59 107836836 107836953 ATCCAGAGTTTGCTCTGTG 59 NA Mus musculus 50 Phlda3 ENSMUSG00000041801 ENSMUST00000038945 1 1 1 109 1 137663231 137663249 TCTACTTCACGCTAGTGAC 58 137663322 137663340 ATTCTTGAACTTGACCAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mkl1 ENSMUSG00000042292 ENSMUST00000100406 1 1 2 92 15 80848748 80848766 CTCCTATGCCAAGATCCTG 59 80848672 80848692 AGTTGTAGTTGTTGCTGCT 59 NA Mus musculus 50 Onecut1 ENSMUSG00000043013 ENSMUST00000056006 3 1 1 60 9 74737246 74737265 ATTACAAATCACCATCTCCC 57 74737288 74737306 GAAGAAGTTGCTGACAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 2310031A18Rik ENSMUSG00000043068 ENSMUST00000055257 3 1 1 126 8 127265055 127265073 CTTCTTCGACGATGAGGAG 59 127264947 127264965 GATGGACTCCAGAATCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hic1 ENSMUSG00000043099 ENSMUST00000055619 3 1 1 69 11 74982978 74982996 CCTGGCTTAAGAGTTCCTC 59 74982927 74982945 GTTATATCGCGCCAATTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1342 ENSMUSG00000043383 ENSMUST00000060562 2 1 1 60 4 118362559 118362578 CTGATCTACACTGTCTTCAC 57 118362518 118362536 AGTGGTTGATCTTGTAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Emx2 ENSMUSG00000043969 ENSMUST00000062216 1 1 1 70 19 59536268 59536286 AAGAACCATTACGTGGTGG 59 59536320 59538371 ACCTGAGTTTCCGTAAGAC 58 NA DesignNoJunction Mus musculus 50 Crb3 ENSMUSG00000044279 ENSMUST00000071826,ENSMUST00000112924,ENSMUST00000097299 1 3 3 72 17 57203076 57203094 AAATAGCACAACTCAACCC 57 57204521 57204539 AGTGATGGCTACAATAGCC 59 NA DesignNoJunction Mus musculus 50 Cdkn2a ENSMUSG00000044303 ENSMUST00000030237,ENSMUST00000060501,ENSMUST00000107131 3 3 3 206 4 88922649 88922667 GACATCGTGCGATATTTGC 59 88920591 88920609 CATCGCTAGAAGTGAAGCT 59 NA DesignNoJunction, InUTR Mus musculus 50 BC037703 ENSMUSG00000044313 ENSMUST00000061831 3 1 1 171 3 101638928 101638946 GGAGACTTAGACCATTGCC 59 101627454 101630671 CCTTAATGCTCTCGTTGTG 58 NA DesignNoJunction Mus musculus 50 Olfr1302 ENSMUSG00000044560 ENSMUST00000054004 3 1 1 60 2 111620959 111620977 GTAGTGATTGTGGAACTGC 58 111621000 111621019 TGTCACAGAAGAAACTATCG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cetn4 ENSMUSG00000045031 ENSMUST00000071400 3 1 3 187 3 37209227 37209247 GGATCTGGAACCATAGATCTG 59 37208087 37208269 GCTTCATCAAGCATTTCCTG 59 NA Nonspecific Mus musculus 50 Onecut3 ENSMUSG00000045518 ENSMUST00000051773 2 1 1 92 10 79976703 79976721 ATCTTCAAGGAGAACAAGC 57 79976777 79976795 GAAGAAGTTGCTGACAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ptprcap ENSMUSG00000045826 ENSMUST00000061086 2 1 1 255 19 4156262 4156280 TTTGTGATAGATGGTGGCC 59 4156499 4156517 ACTCCTATAGTGCAGTGAC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zfp322a ENSMUSG00000046351 ENSMUST00000110440,ENSMUST00000110436,ENSMUST00000050101 2 3 3 109 13 23454739 23460002 GGGTTCTTGTTAAGAAAGCT 58 23449560 23449579 TTTCTTACTTGGTACCTCCA 57 NA InUTR Mus musculus 50 1110002N22Rik ENSMUSG00000046909 ENSMUST00000050207 2 1 1 102 11 79950770 79951428 CTGGAAGAGATTTCTTCAGTC 58 79950688 79950707 GTATAGGAAGCAGAGATGTG 57 NA Mus musculus 50 Mipol1 ENSMUSG00000047022 ENSMUST00000021358,ENSMUST00000101401 2 2 3 82 12 58408385 58408404 AGACTGAAGCTTAAGTTGGA 58 58408449 58426526 ACTTCTTCAACCAAAGCTG 58 NA Mus musculus 50 Ccdc36 ENSMUSG00000047220 ENSMUST00000076592 2 1 1 88 9 108308997 108309015 TGATGGTTGAGTCAGTGAG 58 108308171 108308946 AAATTCTGCTTGTCTAGCTG 58 NA Mus musculus 50 Il23r ENSMUSG00000049093 ENSMUST00000095830 1 1 1 80 6 67440710 67440728 GAGTCACCTCACACTTCAG 59 67436374 67440667 ATACTTGTGATTCCTCCGTG 59 NA Mus musculus 50 Kcnk12 ENSMUSG00000050138 ENSMUST00000055221 3 1 1 61 17 88145717 88145735 AACTTCCTCTTCATCCTGC 59 88145674 88145693 ATGGAGATGACGTTGAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pnma5 ENSMUSG00000050424 ENSMUST00000114540,ENSMUST00000051569 2 2 2 60 X 70281314 70281332 CAGAGGATTCTAGGGAGGT 59 70281272 70281291 CGTTTCACTGATGTCATCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC022960 ENSMUSG00000050528 ENSMUST00000052299 2 1 1 60 X 165807675 165807693 GCAATGAATGAAGACAGCC 59 165807715 165807735 GTTTGGTCTTCGATATGATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 4933427I18Rik ENSMUSG00000051125 ENSMUST00000056790 1 1 1 95 13 24159027 24159045 AATCCAGGATCTCATCGAC 58 24159103 24159359 GCTAAATCTTTCAAGCTGCT 58 NA Mus musculus 50 Apon ENSMUSG00000051716 ENSMUST00000060782,ENSMUST00000105239 2 2 2 60 10 127692062 127692080 TGTAGTCAATGTCACCCAG 58 127692101 127692122 GGCTACTTCATTCATACTTTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Spats2 ENSMUSG00000051934 ENSMUST00000063517 3 1 1 80 15 99008986 99011019 GGACAGAACTGGATCTGTG 59 99011063 99011081 ACATTCGAGATAGAGTGCG 59 NA Mus musculus 50 NM_026030.2 ENSMUSG00000052825 ENSMUST00000064897 1 1 1 147 8 53282057 53282075 GCCAGAGGATTACCTTGAC 59 53281928 53281946 GCTACTGAATGAAATGCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 C920016K16Rik ENSMUSG00000053390 ENSMUST00000075524 2 1 2 60 17 33139554 33139572 CCAGGTTCTTTGTCTATGG 57 33139721 33139739 ATCTCCGTAGTCACAACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nebl ENSMUSG00000053702 ENSMUST00000037174 3 1 4 185 2 17355584 17355603 TTCTGTAATTGGAAGACCAG 57 17335404 17346156 TTATATTCCCAATCACTGGC 57 NA Mus musculus 50 Gon4l ENSMUSG00000054199 ENSMUST00000107498,ENSMUST00000090942,ENSMUST00000081695 2 3 4 102 3 88711415 88711433 AAGAGGAAATCCTGGAGGA 59 88711499 88711923 CCTATTGTTGACCCTGGAG 59 NA Mus musculus 50 Fgfr3 ENSMUSG00000054252 ENSMUST00000114411,ENSMUST00000067150,ENSMUST00000101345 3 3 4 103 5 34070558 34070851 TGTAACAGATGCTCCATCC 59 34072352 34072371 GTTTCTTATCCATTCGCTCC 58 NA Mus musculus 50 Bsx ENSMUSG00000054360 ENSMUST00000067375 3 1 1 231 9 40682494 40682512 CCACCATCCTTATTTCCTG 57 40684561 40685696 TTTCACCTGAGTCTCTGAG 58 NA DesignNoJunction Mus musculus 50 EG215714 ENSMUSG00000054412 ENSMUST00000067468 2 1 1 116 1 137494544 137495992 GGAAATGGTGGTAAGGACC 59 137496072 137496090 GTTTGATGAGCAAGGAAGC 59 NA InUTR Mus musculus 50 Adam10 ENSMUSG00000054693 ENSMUST00000067880 1 1 1 80 9 70624241 70624260 TCAAGATTTGCAGTGTTCAC 58 70624303 70625821 TCCTCTTTAAAGTGCCTGG 59 NA Mus musculus 50 Nfic ENSMUSG00000055053 ENSMUST00000105321,ENSMUST00000020461,ENSMUST00000105320 3 3 5 62 10 80868953 80870312 GACATAGAAGGAGGCATCTC 59 80868910 80868929 GTTGAATGGAGATTTGTCCA 58 NA DesignRelaxed Mus musculus 50 Zfp78 ENSMUSG00000055150 ENSMUST00000036994 1 1 3 122 7 6325847 6325866 TCAACGATGTTGCAATAGAC 58 6325951 6330927 ATTTACCACCCACAGAGAC 58 NA Mus musculus 50 4930583K01Rik ENSMUSG00000055159 ENSMUST00000068576 1 1 1 60 7 125388675 125388695 TCTCCCTATGAGTATATCCCT 58 125388717 125388735 ATTTGTGGGCATACTCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mrfap1 ENSMUSG00000055302 ENSMUST00000068795 3 1 1 74 5 37186274 37186292 GAAGAGGCGTCTTAAAGGT 59 37186218 37186236 ACCTCAAACGCTTATCAGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 A830019P07Rik ENSMUSG00000055453 ENSMUST00000069084 3 1 1 119 19 35998883 35998902 CAGGAGAAATGGTCTCTGTC 59 35916896 35997979 AGGCTCAGTTGAAGTTCAC 59 NA Mus musculus 50 Zzef1 ENSMUSG00000055670 ENSMUST00000069395 2 1 1 80 11 72686119 72686137 CAAGATAGCCCTGACTGAG 59 72686180 72687379 TGCTTCATCTCTAACATCCA 58 NA Mus musculus 50 Zkscan5 ENSMUSG00000055991 ENSMUST00000085671,ENSMUST00000031601 1 2 2 100 5 145979739 145980926 GAAATCCCAAAGATGCAGC 59 145980990 145981008 CTTCTCCCGATAGTTCCAG 58 NA Mus musculus 50 Eif3b ENSMUSG00000056076 ENSMUST00000100507,ENSMUST00000075771 2 2 2 80 5 140903453 140903473 CAAGTTCAAGCAGATTCAGAG 59 140903512 140906017 GTTACCAAGTATCTTTCACACG 59 NA Mus musculus 50 Olfr799 ENSMUSG00000057002 ENSMUST00000071126 3 1 1 60 10 129084513 129084532 TTTCTCTTGGCTATCATGTC 57 129084554 129084573 TGTAATGCAGAGGTTTACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Fxyd3 ENSMUSG00000057092 ENSMUST00000072331 3 1 1 80 7 31856374 31857102 TCTACTATGATTGGTACAGCC 58 31856314 31856333 TAAGGACTATAATGCCCAGG 58 NA Mus musculus 50 Cep110 ENSMUSG00000057110 ENSMUST00000113037,ENSMUST00000028235,ENSMUST00000028237 2 3 7 80 2 34973704 34975463 TAAGATATCATCGCTCCAGG 58 34975506 34975524 ACTGGATTGTCAATGAGGA 58 NA Mus musculus 50 Rbbp4 ENSMUSG00000057236 ENSMUST00000102598 1 1 1 82 4 128999213 128999330 CTTATGATTTGGGACACTCG 58 128999150 128999168 AAGCAATTCACTTCAGCTG 58 NA Mus musculus 50 V1rh12 ENSMUSG00000057395 ENSMUST00000072385 3 1 1 60 13 23275886 23275907 GACGACTATTGCTATTTGACAC 59 23275847 23275865 TGAGAGGGAGAACAATCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr850 ENSMUSG00000057985 ENSMUST00000077347 2 1 1 122 9 19281865 19281883 ATCCAGGAATACTGCAGTG 59 19281761 19281779 ATCCGACTGAAGAATTTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 EG210155 ENSMUSG00000058717 ENSMUST00000081657 2 1 1 60 7 25508424 25508532 GTGAAACTTTCAGAGTCCTC 58 25508383 25508401 GAAAGTGCAAACAGACAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Lep ENSMUSG00000059201 ENSMUST00000069789 2 1 1 100 6 29019071 29019092 CAGGATCAATGACATTTCACAC 59 29020880 29020898 TGGACAAACTCAGAATGGG 59 NA DesignNoJunction Mus musculus 50 Syn3 ENSMUSG00000059602 ENSMUST00000077267 1 1 1 80 10 85543002 85543020 GGAGGCCTTTATTGACTCC 59 85536034 85542959 ATGGAGGTTCTCATGTATGC 59 NA Mus musculus 50 Bckdha ENSMUSG00000060376 ENSMUST00000071329 2 1 1 81 7 26415445 26416029 CACGAAAGAAGGTCATGGA 59 26415382 26415400 TACACATCGGAGAAGAGGA 59 NA Mus musculus 50 Mfap2 ENSMUSG00000060572 ENSMUST00000102492,ENSMUST00000071977 1 2 2 103 4 140569708 140569726 TATGACCTGGATCCTCTCC 59 140569988 140570113 GGACTCACTTCTTGGTAGTC 59 NA Mus musculus 50 1700012C15Rik ENSMUSG00000060630 ENSMUST00000080407 1 1 1 106 11 73503866 73523978 GTAAGAGAACCAGCATTGGA 59 73524044 73524065 CCATTAAGTCCAAATCTTGGTG 59 NA Nonspecific Mus musculus 50 Ext1 ENSMUSG00000061731 ENSMUST00000077273 3 1 1 83 15 52900399 52904860 AATGATGGGACAGACTTCC 58 52900334 52900353 GCAAATGTATTCATGCAGCT 59 NA Mus musculus 50 Gm1082 ENSMUSG00000062132 ENSMUST00000080940 2 1 1 91 7 31304477 31304592 ACTATCATGACCAACCTCCT 59 31304646 31304664 TCAGCCAATAGCACATCAG 59 NA Mus musculus 50 Lilrb4 ENSMUSG00000062593 ENSMUST00000105482,ENSMUST00000105481,ENSMUST00000078778,ENSMUST00000105479 3 4 7 113 10 51211422 51211440 ATTCCAAGCATGACAACCT 59 51211515 51211677 TTCATATGCTCCTGTCATCAC 59 NA Mus musculus 50 Olfr1206 ENSMUSG00000062757 ENSMUST00000077302 2 1 1 60 2 88705095 88705113 TTGTCCTCATTCTCATGGC 59 88705135 88705155 GGGTATCGTAAGGGTTTACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2010204K13Rik ENSMUSG00000063018 ENSMUST00000081164 3 1 1 82 X 6989434 6989452 TGCTGTTTACTGTTTGCTG 58 6989370 6989388 CAAGTTGGATCTTCATCGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 1700011J10Rik ENSMUSG00000063714 ENSMUST00000077161 3 1 1 61 2 72825679 72826436 ATTTGACCGAGAAGACCAC 59 72826460 72826479 ATATCTGCAACTCACATCGT 59 NA DesignRelaxed Mus musculus 50 Dupd1 ENSMUSG00000063821 ENSMUST00000073870 1 1 1 83 14 22496372 22505844 TGACCACAGTAAGATCCTG 58 22496307 22496325 TTGTGGATCATCAGGTAGG 58 NA Mus musculus 50 Cdc42ep5 ENSMUSG00000063838 ENSMUST00000076831 3 1 1 170 7 4115695 4115714 AATTAAGTCTGGACCACGAG 59 4103239 4103257 GACTCAGGAATGAGGTGTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Defcr24 ENSMUSG00000064213 ENSMUST00000080533 3 1 1 114 8 22845761 22845779 ATTGTAGAGCAAGAGGCTG 59 22845857 22845875 CATCTTGTCCTCTGTGGTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Cldn9 ENSMUSG00000066720 ENSMUST00000085989 2 1 1 144 17 23820543 23820562 CTAGGAACTTTGGTGTCCTG 59 23820418 23820436 ATACTTTGCACTGCATCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC031901 ENSMUSG00000067206 ENSMUST00000087177 2 1 1 81 5 74006883 74020784 GTGGTACTCCTAAAGGACTG 59 74006821 74006839 AGCCCAATGTGAACTATCC 59 NA Mus musculus 50 Speer3 ENSMUSG00000067855 ENSMUST00000088625 2 1 1 78 5 13795571 13796302 AACTTCAGGACTCAGAGAC 58 13796344 13796362 AGAAACTCATTGTGCAGGA 59 NA DesignRelaxed Mus musculus 50 4930430D24Rik ENSMUSG00000068046 ENSMUST00000089060,ENSMUST00000115153 1 2 2 75 X 35392848 35392866 TATACCTGATCACCAGCAG 58 35391964 35391982 GGAACTTGCAGATGAAGGT 59 NA DesignNoJunction, InUTR Mus musculus 50 1200003I07Rik ENSMUSG00000068134 ENSMUST00000109931,ENSMUST00000094538 3 2 3 69 2 149945600 149945621 TCTCAGAAGGATCTCTACAGAG 59 149943928 149945570 CTTTCATGCCTATAGCAGC 58 NA DesignRelaxed Mus musculus 50 Ssb ENSMUSG00000068882 ENSMUST00000090852,ENSMUST00000090851,ENSMUST00000112260 3 3 3 151 2 69704341 69704553 AATTCAACAGGCTAAACCG 58 69704667 69704686 ATACTCATCCGTCACTTCAG 58 NA Mus musculus 50 EG330776 ENSMUSG00000070023 ENSMUST00000093494 2 1 1 102 8 62908962 62980010 CTATCTTCAGGCCATTGGA 58 62908878 62908896 AATAGTGTCACTCCTTGGG 58 NA Mus musculus 50 Slc22a14 ENSMUSG00000070280 ENSMUST00000093775 3 1 1 80 9 119083117 119083138 TTCTATCTTGGACTTCTGTACC 58 119082763 119083077 TAACTGACGGTAAACCACAC 59 NA Mus musculus 50 Prss36 ENSMUSG00000070371 ENSMUST00000094026 2 1 1 81 7 135078131 135079025 CCTATGTTGGAAAGATTCCAG 58 135078070 135078088 TGAGAGGGTTCTGTATCCT 58 NA Mus musculus 50 Fcrlb ENSMUSG00000070524 ENSMUST00000094337 1 1 1 104 1 172839025 172842169 CTCTGTGTCTAACGACTGG 59 172838939 172838957 TAGACGACTTTGTCGTACC 58 NA Mus musculus 50 Olfr270 ENSMUSG00000070983 ENSMUST00000095084 3 1 1 60 4 52984275 52984294 AAACCCAAGTCAAAGTACAC 58 52984316 52984335 CAACTCCATAAGACAGTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trim6 ENSMUSG00000072244 ENSMUST00000098180,ENSMUST00000097023 3 2 2 80 7 111374423 111374442 CTTTGTGAACGATCTCAGGA 59 111374485 111375331 GAACATGTCCTGGTACTCC 59 NA Mus musculus 50 NM_146545.2 ENSMUSG00000072402 ENSMUST00000097163 3 1 1 60 10 128688175 128688193 CATTTGGCCTTTATTGTGC 57 128688216 128688235 GACAAGATCACTAGAGCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm628 ENSMUSG00000072487 ENSMUST00000071419,ENSMUST00000110021 1 2 2 80 15 73622198 73622219 GCTATCTTAGAACAGTTTGGAC 58 73621843 73622159 TAACCATGAACAGACCTTCAG 59 NA Mus musculus 50 4930488E11Rik ENSMUSG00000072955 ENSMUST00000101228,ENSMUST00000113071 1 2 2 86 X 133509995 133510014 CAGAAGTTGAAACGTTTGAC 57 133508770 133509947 GCTGGATAGTTTCATTCGAC 58 NA Nonspecific Mus musculus 50 Speer4c ENSMUSG00000073208 ENSMUST00000095005 1 1 1 80 5 15216612 15216630 TGGTGGAATTGAACCTGAG 59 15215807 15216571 TTTCTGAGACCTGATATTCTGG 59 NA Nonspecific, InUTR Mus musculus 50 Tulp4 ENSMUSG00000073472 ENSMUST00000097431 2 1 1 61 17 6123251 6123269 AATGATGCATAACAGAGCC 57 6123294 6123312 TCAATTTGTCACCTGACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Thap4 ENSMUSG00000073611 ENSMUST00000097635 3 1 1 81 1 95646377 95646883 CCTATTCAGCCCTCTTTCG 59 95646925 95646946 TCATATAGTTTCTCCTCCAAGC 59 NA InUTR Mus musculus 50 6430531B16Rik ENSMUSG00000073795 ENSMUST00000097970 1 1 1 80 7 147162563 147162979 GGTACAGCTGATCCAAGAC 59 147162501 147162520 CTTAGAGGTATGTGGGTTGG 59 NA Mus musculus 50 NP_796335.1 ENSMUSG00000073811 ENSMUST00000097990 3 1 2 122 4 88248747 88248765 ATCACTGTGTACCTGAGAG 57 88248193 88248662 TTGTTCCTTCTCACTCAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tufm ENSMUSG00000073838 ENSMUST00000098048,ENSMUST00000106392 2 2 2 64 7 133632902 133632920 AGATGAGTGTGAGTTGCTG 59 133632948 133633077 ACATCTCAATGCCTGTCAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Il11ra2 ENSMUSG00000073876 ENSMUST00000098121 3 1 1 80 4 42031025 42031043 AGTAGTAGCTCAGGAGGAC 59 42030866 42030981 GGATCCCTGTGATCAAGTG 59 NA Nonspecific Mus musculus 50 Olfr476 ENSMUSG00000073891 ENSMUST00000077249 3 1 1 62 7 115110939 115110958 GACAGAGTTCATTCTTCTGG 57 115110982 115111001 ACCATAAATAGGATGACACG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr638 ENSMUSG00000073933 ENSMUST00000098184 2 1 1 60 7 111152334 111152354 CTCCACCAGGATATGATTCAC 59 111152376 111152394 ATCCGTACCATCTGTTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr593 ENSMUSG00000073955 ENSMUST00000098206 3 1 1 60 7 110360665 110360683 TCTTCTGGTTTCACGATGG 59 110360706 110360725 ATCAGGAAGATCTGAGTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 2810426N06Rik ENSMUSG00000074165 ENSMUST00000100275,ENSMUST00000045720,ENSMUST00000098508 2 3 3 106 7 48902980 48903199 TTGTGTCGGAAACAAATGG 58 48903578 48903600 CTTCAGTACTCTCATAGAGTCTC 58 NA Mus musculus 50 Apoc4 ENSMUSG00000074336 ENSMUST00000003071 3 1 1 176 7 20264077 20266658 TGTAGCATCCATGTCTACAG 58 20263623 20263642 TAGTAGGTCTGCATAAAGCC 58 NA DesignNoJunction Mus musculus 50 Sox2 ENSMUSG00000074637 ENSMUST00000099151 2 1 1 60 3 34549655 34549674 GCACCCGGATTATAAATACC 58 34549695 34549715 CTTATCCTTCTTCATGAGCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1316 ENSMUSG00000074943 ENSMUST00000099596 3 1 1 66 2 111970225 111970245 CTGCTCATATCTCAGTAGTGG 59 111970179 111970198 GGAGTAGGCCATGTATAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1282 ENSMUSG00000074964 ENSMUST00000099618 1 1 1 60 2 111175929 111175947 GGTATATGAGGCAGATCGT 58 111175887 111175906 ACAAGAAGTACCATCTCACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075292 ENSMUSG00000075292 ENSMUST00000100029 2 1 1 60 10 22541854 22541873 CACAAGTCTCCTAATGAGGT 58 22541895 22541914 TCTGGTATGTAACAATGCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930588K23Rik ENSMUSG00000075335 ENSMUST00000100090 2 1 1 60 16 18609545 18609563 ATGCAGAGTCTTAGGTTGG 58 18609586 18609605 CTTTATAGCTTACCCTGGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV12-46 ENSMUSG00000076564 ENSMUST00000103365 1 1 1 173 6 69714801 69714942 TACAGATGCCAGATGTGAC 59 69714646 69714664 TTTGTTGCAGCATAGACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmco2 ENSMUSG00000078577 ENSMUST00000106268 2 1 1 60 4 120781557 120781575 TGACTTTGTTGGCAATTGG 59 120778658 120781534 TTCTGAATTGACCGAATGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2A521_MOUSE ENSMUSG00000078581 ENSMUST00000106308 1 1 1 81 11 117985414 117985432 GAATTCCCTTCATCCCTCG 59 117983257 117985369 CCGTCTTGTAAAGGTCCTC 59 NA Mus musculus 50 Ccdc24 ENSMUSG00000078588 ENSMUST00000106422,ENSMUST00000084325 3 2 2 100 4 117542575 117542712 AGAGATTAAGGATCAGAAGGC 58 117542414 117542432 ATGACCTCAAAGGCTTCTG 59 NA DesignNoJunction Mus musculus 50 NP_001092785.1 ENSMUSG00000078626 ENSMUST00000106916,ENSMUST00000106918 1 2 2 139 4 101640643 101640661 CACATGGTAGCAAATTGGC 59 101640376 101640540 AGTCTACACCTCTTAGGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2ARL5_MOUSE ENSMUSG00000078893 ENSMUST00000109038,ENSMUST00000109036,ENSMUST00000109037 2 3 3 63 2 175550116 175550134 GAGTCTCTACAAGGGTGTG 59 175550158 175550385 CCAAATGTAACCTATAGCTGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Kdelr2 ENSMUSG00000079111 ENSMUST00000110731 1 1 1 80 5 144179252 144180503 CTCTTGAGATCTTATGGACCT 58 144180542 144180563 CAGTCTTGCTGATCATAAAGAG 58 NA Mus musculus 50 LOC100041050 ENSMUSG00000079156 ENSMUST00000110967 1 1 1 108 5 138506948 138506966 AAAGAGACATCTCACCTGG 58 138507038 138507471 ATCCTCTGGTGATCTTCTG 58 NA Nonspecific, InUTR Mus musculus 50 1700001E04Rik ENSMUSG00000079403 ENSMUST00000112802 1 1 1 81 14 3741247 3741267 CAATGACATGGAGGAAATGTG 59 3741307 3742283 GTTGAATTCAGTGTTCATCCTG 59 NA Nonspecific Mus musculus 50 9930032O22Rik ENSMUSG00000079451 ENSMUST00000113362 3 1 1 80 5 86927590 86928580 GGTGTATGATGAGAAGACTC 57 86927529 86927547 TCTTTGGACAAATCTGAGC 57 NA Mus musculus 50 NP_001074667.1 ENSMUSG00000079588 ENSMUST00000114765 2 1 1 81 1 40864558 40895153 CGCAATTATTTACCGTGGC 59 40895197 40895216 GATGATCAGAAAGCTTGCAG 59 NA Mus musculus 50 4933416I08Rik ENSMUSG00000079593 ENSMUST00000114828 2 1 1 153 X 50881417 50881834 CAACAGAAGTTTGTGTTTCC 57 50880384 50881302 ATGGCTTTAGAAATGCTGTC 58 NA Mus musculus 50 4930488E11Rik ENSMUSG00000079851 ENSMUST00000069803 1 1 1 103 X 133491349 133491368 CGATAAACCAGACTTGTCAG 58 133490013 133491283 GCTGGATAGTTTCCTTCGA 59 NA Nonspecific Mus musculus 50 Arvcf ENSMUSG00000000325 ENSMUST00000115613,ENSMUST00000090103,ENSMUST00000115611 2 3 7 126 16 18400883 18401669 TCCATCAAGGGAAGAAGGA 59 18402728 18402746 GAGAGGTAGAGACGTACCA 59 NA Mus musculus 50 Oprm1 ENSMUSG00000000766 ENSMUST00000105615,ENSMUST00000105614,ENSMUST00000105601,ENSMUST00000105611 3 4 21 82 10 3366882 3366903 CCCAGATCTTTACAGGATATCC 59 3332485 3366839 AAGGTTCCTCATTCCTCTG 58 NA Mus musculus 50 Slc39a13 ENSMUSG00000002105 ENSMUST00000111436,ENSMUST00000073575,ENSMUST00000111434,ENSMUST00000079976 2 4 4 94 2 90903313 90903487 CAAAGGAGTAGAGGAGACG 58 90903237 90903255 CCAAGAGGTCAGGTAACAC 59 NA Mus musculus 50 Rhoc ENSMUSG00000002233 ENSMUST00000106787,ENSMUST00000002303 2 2 2 77 3 104594939 104594958 ATATAGCCGACATCGAAGTG 59 104595510 104595528 GATCGTAGTCTTCTTGCCC 59 NA DesignNoJunction Mus musculus 50 Uck1 ENSMUSG00000002550 ENSMUST00000002625,ENSMUST00000113405 2 2 2 189 2 32113860 32113878 TTCTACACCCAGGAGATCC 59 32112174 32113615 CGTACTTCTTAGTCGGCAG 59 NA Mus musculus 50 Pex19 ENSMUSG00000003464 ENSMUST00000075895 2 1 2 104 1 174058860 174059292 GATACTGCCAAAGATGCTC 58 174059360 174059378 CATTGCCTTCTCAAACTCC 58 NA Mus musculus 50 Cp ENSMUSG00000003617 ENSMUST00000091309,ENSMUST00000108327,ENSMUST00000108325 3 3 6 123 3 19889104 19889124 CAAACCCTAGAAATGTTTCCC 59 19889206 19892517 ACTTAGTCTCTTGTTCTACTGG 58 NA Mus musculus 50 Mast2 ENSMUSG00000003810 ENSMUST00000003908,ENSMUST00000106484,ENSMUST00000106486,ENSMUST00000106485,ENSMUST00000046416 1 5 5 138 4 116064222 116077968 GAAGGAATTGAGCCTTCCA 59 116010089 116025582 CAAGGGACTGTTACCTGTG 59 NA Mus musculus 50 Cacna1b ENSMUSG00000004113 ENSMUST00000102939,ENSMUST00000100348,ENSMUST00000093372,ENSMUST00000041342,ENSMUST00000114447,ENSMUST00000114442 1 6 7 177 2 24478158 24478176 TTTACGTCCACACTGATGG 59 24473295 24473781 TCATCTCGTCAGGTTTGTG 59 NA Mus musculus 50 Hdac9 ENSMUSG00000004698 ENSMUST00000110819,ENSMUST00000110818,ENSMUST00000073838 3 3 4 80 12 35122054 35122072 TAGCAGAGTTTCAGAAGCA 58 35118078 35122011 CTAGAAGTTCCTTGATGTGC 58 NA Mus musculus 50 Dtx2 ENSMUSG00000004947 ENSMUST00000005072,ENSMUST00000111142 3 2 5 118 5 136502443 136502461 CTCAGTTAAGAGGCTGAGG 59 136504434 136504943 TAATGCAGTCCTCTTCAGG 58 NA Mus musculus 50 Cd44 ENSMUSG00000005087 ENSMUST00000005218,ENSMUST00000111189 1 2 15 80 2 102688866 102688885 GGATATGGTCTTGGTTTGGT 59 102686668 102688823 TCATCAAGGCTGTAGTTGC 59 NA Mus musculus 50 Pole ENSMUSG00000007080 ENSMUST00000007296,ENSMUST00000112481 2 2 3 80 5 110765998 110766017 ATGAAAGAGACCCATATGCC 59 110766060 110766162 TTCCATGAAGACCTCAGTG 58 NA Mus musculus 50 Elavl2 ENSMUSG00000008489 ENSMUST00000107120,ENSMUST00000107111,ENSMUST00000107109,ENSMUST00000107118,ENSMUST00000084426,ENSMUST00000107110,ENSMUST00000107116,ENSMUST00000102799,ENSMUST00000078179,ENSMUST00000008633,ENSMUST00000107124,ENSMUST00000107114,ENSMUST00000107113 3 13 13 122 4 90930778 90930796 CAAACTTATACGTCAGCGG 58 90927669 90930692 TTGATATGCCAGTGACCTG 59 NA Mus musculus 50 4933402N03Rik ENSMUSG00000013668 ENSMUST00000070980,ENSMUST00000013812 2 2 2 138 7 138282716 138289369 GAAATTCAACATCTCGGTGG 59 138282597 138282615 CTCTTCCCAACTCTATGGC 59 NA Mus musculus 50 Dguok ENSMUSG00000014554 ENSMUST00000113888,ENSMUST00000014698 3 2 3 106 6 83437052 83437070 CACATCTATCAGGACTGGC 59 83431443 83436982 CTCTCCATACAAACCTGGG 59 NA Mus musculus 50 Camta1 ENSMUSG00000014592 ENSMUST00000058864,ENSMUST00000105669,ENSMUST00000105670 1 3 6 155 4 150449251 150449269 GAGTTACAAGAAGTGTGGC 58 150436953 150448103 AATTCTTTCACTCTGTGGC 57 NA Mus musculus 50 Mtap2 ENSMUSG00000015222 ENSMUST00000114017,ENSMUST00000114018 1 2 7 127 1 66472077 66472095 TCAAATACCAGCCTAAGGG 58 66478184 66480096 AATTTGTACATTTCCGCCC 58 NA Mus musculus 50 Arnt ENSMUSG00000015522 ENSMUST00000102749,ENSMUST00000015666,ENSMUST00000090804 3 3 4 96 3 95297695 95297714 TTCAGTGCTATGTCTCTTCC 59 95297773 95298377 TCTCAGGAGGAAAGTTGGA 59 NA Mus musculus 50 Rxra ENSMUSG00000015846 ENSMUST00000077257,ENSMUST00000100251,ENSMUST00000113934 2 3 3 89 2 27611800 27613289 GTTCAACCCTGACTCTAAGG 59 27613341 27613359 TTGCAGTACGCTTCTAGTG 59 NA Mus musculus 50 Kcnq2 ENSMUSG00000016346 ENSMUST00000016491,ENSMUST00000049792,ENSMUST00000103047,ENSMUST00000103048,ENSMUST00000081528,ENSMUST00000103051,ENSMUST00000103050,ENSMUST00000103049,ENSMUST00000080022,ENSMUST00000072952 3 10 10 130 2 180848377 180848395 GACTATCGTGGTATTCGGT 58 180847932 180848285 GCACCATGATATCAATCACAC 59 NA Mus musculus 50 Ccdc56 ENSMUSG00000017188 ENSMUST00000017332 2 1 1 62 11 101139745 101139763 GTTACACCTTCTACTCGGT 58 101139701 101139719 CTTTGGCTTCATCTTCCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Glod4 ENSMUSG00000017286 ENSMUST00000017430,ENSMUST00000021205 1 2 2 80 11 76047482 76047902 GCTGATAACCAGTGTAAGC 58 76047420 76047439 AAAGGCAATTCTTCCAAAGG 58 NA Mus musculus 50 Cacnb4 ENSMUSG00000017412 ENSMUST00000078324,ENSMUST00000102760,ENSMUST00000102761 1 3 3 80 2 52305518 52305536 AAAGTCCCAAAGCAAACAC 59 52292578 52305474 ACATCAAACATTTCAGGCG 59 NA Mus musculus 50 Rhot1 ENSMUSG00000017686 ENSMUST00000077451,ENSMUST00000055056,ENSMUST00000017831,ENSMUST00000092857 3 4 4 80 11 80039610 80040792 ATTGATAAGGTAACAAGCCG 57 80046884 80046902 AACCAATATCAAAGGCAGC 58 NA Mus musculus 50 Slc12a5 ENSMUSG00000017740 ENSMUST00000017884,ENSMUST00000099092,ENSMUST00000109311 1 3 3 127 2 164801948 164801967 ACATGATTTCCAGGTCTCTG 59 164802057 164804790 GAAGAGATAAGCCAGCAGG 59 NA Mus musculus 50 Ctsa ENSMUSG00000017760 ENSMUST00000017904,ENSMUST00000103093,ENSMUST00000103092,ENSMUST00000109323,ENSMUST00000109319,ENSMUST00000109318 3 6 7 109 2 164659609 164659629 AGGATGAAATCGATTGTCTCC 59 164659700 164659829 CTCCACAAACCAGTAGTGG 59 NA Mus musculus 50 1700081L11Rik ENSMUSG00000018412 ENSMUST00000106977,ENSMUST00000018556 1 2 7 137 11 104204907 104204926 TGACAAGATCAAACCTACCA 58 104203810 104204807 GTGTGATGCTTCAACATGG 59 NA Mus musculus 50 Ncor1 ENSMUSG00000018501 ENSMUST00000018645,ENSMUST00000101067,ENSMUST00000101068 1 3 8 145 11 62192131 62192149 AGAACATGGTCGTAACTGG 59 62190251 62192022 GTTTCCGTGAAGCTTTCTG 59 NA Mus musculus 50 Ikzf1 ENSMUSG00000018654 ENSMUST00000109673 1 1 9 80 11 11655068 11668893 CAGAATAATGGGAGACAAGTG 58 11668934 11668953 TGGGATGTCATCATATCCTC 58 NA Mus musculus 50 Tmpo ENSMUSG00000019961 ENSMUST00000092219 2 1 6 94 10 90621558 90621576 CTGAAGCTTGAGAAGAGGG 59 90615915 90621501 GAAGTTTCCACCTGATTGTG 59 NA Mus musculus 50 Cnot2 ENSMUSG00000020166 ENSMUST00000020374 1 1 5 105 10 115964893 115964911 CTATGTTCCCACATCGGTC 59 115947504 115954382 TTCAGAAATCTTTGTTGCCC 58 NA Mus musculus 50 Vdac1 ENSMUSG00000020402 ENSMUST00000102758,ENSMUST00000020673,ENSMUST00000109065 2 3 3 106 11 52188460 52189904 GAATGGATTGGAATTTACCAGC 59 52189971 52189989 TAAACGTCAGCCCATACTC 59 NA Mus musculus 50 Tcn2 ENSMUSG00000020432 ENSMUST00000109993,ENSMUST00000109991,ENSMUST00000020710,ENSMUST00000109990,ENSMUST00000109988,ENSMUST00000109992,ENSMUST00000109989 2 7 7 96 11 3822083 3822101 TGTCACCATACGAACAGAC 59 3819400 3822023 GTCCCATACGTGAATCCTC 59 NA Mus musculus 50 Ogdh ENSMUSG00000020456 ENSMUST00000003461,ENSMUST00000109797,ENSMUST00000079291,ENSMUST00000101554,ENSMUST00000093350,ENSMUST00000101555,ENSMUST00000081894 1 7 7 83 11 6197128 6197146 CTTAGTGGGACTAGTTCGA 57 6197192 6213799 GTCCCATGACTTATGTACAC 57 NA Mus musculus 50 Ccdc104 ENSMUSG00000020462 ENSMUST00000020754,ENSMUST00000093243 1 2 2 80 11 29122872 29125864 ACCCTCAGAAGTTAAAGTGC 59 29122811 29122830 GAAGTTTCAGGCAACAACTC 59 NA Mus musculus 50 Llgl1 ENSMUSG00000020536 ENSMUST00000052346,ENSMUST00000108719 3 2 2 86 11 60526160 60526179 GACCAGAGACATCATTCTGG 59 60526228 60526438 GGTGGTTCCATGGTATCAG 59 NA Mus musculus 50 Itsn2 ENSMUSG00000020640 ENSMUST00000062580,ENSMUST00000020972 1 2 2 80 12 4671360 4671378 CAGCTGTGACTAAGAAACC 58 4671422 4672977 GTGCAATGTAGTCTTCTCC 57 NA Mus musculus 50 Recql5 ENSMUSG00000020752 ENSMUST00000106472 2 1 2 87 11 115792051 115792069 GTCTCTGTGCTATCAACTC 57 115789450 115792001 CTCTTGAACCTGAATCAAGG 58 NA Mus musculus 50 Spag9 ENSMUSG00000020859 ENSMUST00000100565 2 1 8 94 11 93932931 93951990 CTCTTTGAAGAGCTCAGCA 59 93953080 93953098 GAGGCTAAACTAGCCTCAG 59 NA Mus musculus 50 Dlg4 ENSMUSG00000020886 ENSMUST00000108586 3 1 5 142 11 69837602 69840431 TGTCTCTGCGTGAAATACC 59 69843947 69844107 ACCTGCAACTCATATCCTG 59 NA Mus musculus 50 Pygl ENSMUSG00000021069 ENSMUST00000110528,ENSMUST00000071250 2 2 2 89 12 71298096 71298219 ATAATTGGTGGCAAAGCTG 58 71298025 71298044 GTCATTGTTCACCACTTCTG 59 NA Mus musculus 50 4933426M11Rik ENSMUSG00000021133 ENSMUST00000085243,ENSMUST00000068519 1 2 2 82 12 81975490 81975509 CAAAGACACTGCAGATTCAG 59 81975551 81978091 GTGGGATATCATCTGTGTACTC 59 NA Mus musculus 50 Eif5 ENSMUSG00000021282 ENSMUST00000050993,ENSMUST00000074417 3 2 3 139 12 112777854 112777872 TCAGACCAGTTCTATCGCT 59 112778087 112778353 TATTTGGTGGGATACGTTGG 59 NA Mus musculus 50 Smad5 ENSMUSG00000021540 ENSMUST00000109876,ENSMUST00000069557,ENSMUST00000109874 1 3 3 81 13 56825347 56828772 GGAGAGTCCAGTCTTACCT 59 56828817 56828835 CCTGAACTGAACCAGAAGG 59 NA Mus musculus 50 Med10 ENSMUSG00000021598 ENSMUST00000022089 1 1 1 99 13 69952613 69952631 TACACCAAAGAATGCCTGG 59 69954478 69954496 GTTCCTGAATCAGTAGGCT 58 NA DesignNoJunction Mus musculus 50 Trim23 ENSMUSG00000021712 ENSMUST00000022225,ENSMUST00000069187,ENSMUST00000069174,ENSMUST00000109312 2 4 4 110 13 104991379 104991399 AAGGAGTTGGTATATTCAGGG 58 104991471 104991489 CAAGCAACATCCAACACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cenpk ENSMUSG00000021714 ENSMUST00000070761,ENSMUST00000099187,ENSMUST00000022227 2 3 3 126 13 105020946 105022743 AAGACATGGAAGATTGTCAG 57 105024264 105024282 TTCCATTGACCAAGTTCAG 57 NA Mus musculus 50 Fgf9 ENSMUSG00000021974 ENSMUST00000022545,ENSMUST00000074654 1 2 2 131 14 58702051 58702069 TATCAGTATAGCAGTGGGC 58 58728191 58728210 TCAAACTGTTCTCTGAACAC 57 NA DesignNoJunction Mus musculus 50 Cab39l ENSMUSG00000021981 ENSMUST00000022553 3 1 2 108 14 60157945 60157964 CCAAGTATATCAGCAAGCCA 59 60158034 60165833 GCCACAAACACCTTAAAGAC 59 NA Mus musculus 50 Slc22a17 ENSMUSG00000022199 ENSMUST00000078122,ENSMUST00000050772,ENSMUST00000111469 1 3 3 80 14 55526458 55526732 CTGTGGGATTATCTGAACGA 59 55526397 55526415 GAGGATAGCAGAAGCTTGG 59 NA Mus musculus 50 Ctnnd2 ENSMUSG00000022240 ENSMUST00000110415,ENSMUST00000081728 1 2 3 186 15 30835492 30835510 CAAACCCTACCTCACACTG 59 30850537 30851624 GATATACACGGACCACTGTG 59 NA Mus musculus 50 Myo10 ENSMUSG00000022272 ENSMUST00000110457,ENSMUST00000073021 1 2 4 80 15 25665781 25665799 GATCAAAGGCAAAGACGAC 59 25665843 25666169 TCAAAGTGGTTAACCTCGA 58 NA Mus musculus 50 Plec1 ENSMUSG00000022565 ENSMUST00000074834 1 1 10 118 15 76059817 76059835 AACAGGATTTCATCCAGGC 59 76024852 76025190 CCTCTGAGCCTTGATAAGG 59 NA Mus musculus 50 Grik1 ENSMUSG00000022935 ENSMUST00000023652,ENSMUST00000072256,ENSMUST00000114137 3 3 3 83 16 87948233 87950281 ACTATTCTGGAAGAGCCCT 59 87948168 87948189 CAGGCAATATCCTTCAAATCTG 59 NA Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000114001,ENSMUST00000114002,ENSMUST00000064797,ENSMUST00000113999,ENSMUST00000056482,ENSMUST00000113996,ENSMUST00000113993,ENSMUST00000116575,ENSMUST00000023678,ENSMUST00000113986 2 10 16 115 16 91840076 91841740 GGTCTACCACAGAGAAAGG 58 91841819 91841837 CTGGATGGTGATCTCATCG 59 NA Mus musculus 50 Larp4 ENSMUSG00000023025 ENSMUST00000100206,ENSMUST00000023766,ENSMUST00000057632 1 3 3 153 15 99816615 99817843 GATGTTTCTGGAGAAAGCAG 58 99820773 99820791 TCCATATTGGGACGAACTG 59 NA Mus musculus 50 Ube2j2 ENSMUSG00000023286 ENSMUST00000103175,ENSMUST00000024056,ENSMUST00000105583,ENSMUST00000105581,ENSMUST00000105582 1 5 5 108 4 155325608 155329347 GACTCCTTATGAAGGTGGC 59 155329417 155329437 GCACTTAAATCTTCCATTGGG 59 NA Nonspecific Mus musculus 50 Ccndbp1 ENSMUSG00000023572 ENSMUST00000099488 3 1 3 98 2 120838685 120838706 TGGACATTTCTGATGAGATCAG 59 120839746 120840258 ACACATTCACACTGATCCG 59 NA Mus musculus 50 Synj2 ENSMUSG00000023805 ENSMUST00000080283,ENSMUST00000115791,ENSMUST00000061091,ENSMUST00000115789,ENSMUST00000115784,ENSMUST00000115785,ENSMUST00000115783 1 7 7 89 17 6009806 6010407 CTCTTGAGGTCCTTCATCTG 59 6010459 6010477 ACATGGCTTTGAAGGACTC 59 NA Nonspecific Mus musculus 50 Stk38 ENSMUSG00000024006 ENSMUST00000009138,ENSMUST00000069459 1 2 2 80 17 29128359 29129374 GAAAGACGAAGAGAAACGAC 58 29128298 29128317 AGCCTTGTTCTCTTTAATCG 57 NA Mus musculus 50 Lpin2 ENSMUSG00000024052 ENSMUST00000112649,ENSMUST00000053173,ENSMUST00000024848 3 3 5 82 17 71595852 71596178 AAATCATCGTATCACAGGCT 59 71596222 71596241 CATGGAAAGGCAGAATTCTG 59 NA Mus musculus 50 Pdpk1 ENSMUSG00000024122 ENSMUST00000102927,ENSMUST00000115407,ENSMUST00000115411,ENSMUST00000115408,ENSMUST00000052462 1 5 5 97 17 24238633 24238651 TTTGATGAGACCTGTACCC 58 24237861 24238573 TCTGGTTTAAGGTCTCTGTG 58 NA Mus musculus 50 Dsc2 ENSMUSG00000024331 ENSMUST00000075214 1 1 2 80 18 20190896 20191573 GACTTGGTGATAAGGTACAG 57 20190835 20190854 CATAGTTGTATGTGAGGACG 57 NA Mus musculus 50 Mbd2 ENSMUSG00000024513 ENSMUST00000074058 3 1 3 83 18 70740458 70752866 CAGAACAAGGGTAAACCAG 57 70752913 70752931 GAATTTGGTTACTGGTTGC 57 NA Mus musculus 50 Cd6 ENSMUSG00000024670 ENSMUST00000080292,ENSMUST00000025572,ENSMUST00000113053 3 3 4 83 19 10867424 10868639 CAAAGAAGCTCCTATGCTG 58 10867359 10867377 TCATAGTGCTCATAGTCGG 58 NA Mus musculus 50 Ltbp3 ENSMUSG00000024940 ENSMUST00000076366 1 1 2 80 19 5753978 5753998 CAATACCAATGGTTCCTACAG 58 5754037 5755552 TCTATATCTACTTGGCACTTCC 58 NA Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000041717,ENSMUST00000111662,ENSMUST00000086848,ENSMUST00000061496,ENSMUST00000078917,ENSMUST00000111659,ENSMUST00000111651,ENSMUST00000111649,ENSMUST00000111653,ENSMUST00000111656 1 10 15 122 19 55817577 55817595 GATGGAGGGCTCTTTAAGG 59 55817680 55892265 CATCTGAAGATAGGTTCGGG 59 NA Mus musculus 50 Gps1 ENSMUSG00000025156 ENSMUST00000116305,ENSMUST00000106143,ENSMUST00000026153 2 3 4 60 11 120649863 120649881 GCTATGATTCTGAGAGCAG 57 120649905 120649996 CTCTAGGAGGAGACTTGAC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Tmem80 ENSMUSG00000025505 ENSMUST00000026578,ENSMUST00000071001 3 2 2 113 7 148517447 148518814 CTTCCATAAGAACGGGAGAG 59 148519598 148519616 ATCAGGAGTGTAGCTAGGA 58 NA InUTR Mus musculus 50 Dach2 ENSMUSG00000025592 ENSMUST00000113379,ENSMUST00000067219,ENSMUST00000113382 3 3 6 103 X 110928586 110928729 TTGACCAACATTCAGGGTC 59 110928796 110928814 CTGAAGAGCTCTATTCGCA 59 NA Mus musculus 50 Pard3b ENSMUSG00000025969 ENSMUST00000102822,ENSMUST00000114157,ENSMUST00000075144,ENSMUST00000027112,ENSMUST00000063594,ENSMUST00000114155 3 6 6 80 1 62830116 62831623 GACATGGAGTATCAGATCGT 58 62831665 62831684 TATCCGAATGTCATCGATGG 59 NA Mus musculus 50 Prim2 ENSMUSG00000026134 ENSMUST00000027312 1 1 2 82 1 33687269 33719099 TTTGAGGCTATCAGTGACG 59 33687205 33687223 AACTTGATCCCACTTAGGC 59 NA Mus musculus 50 Pam ENSMUSG00000026335 ENSMUST00000097625 3 1 2 111 1 99782183 99782201 TATGATCCATGGGCATCAC 59 99749793 99780705 TTCTTCCACATGGAAATCCT 58 NA Mus musculus 50 Lamc2 ENSMUSG00000026479 ENSMUST00000027753 1 1 2 86 1 154977926 154978967 GATCTGTCCTTTCAGGTGG 59 154977858 154977876 GAATGCATCCGTTTGTCTG 59 NA Mus musculus 50 Acvr1c ENSMUSG00000026834 ENSMUST00000028178,ENSMUST00000112608,ENSMUST00000100085 3 3 4 84 2 58137404 58140106 CAGCTGACAACAAAGATAATGG 59 58137341 58137361 AAATAGTCATACAAGGAGCCC 59 NA Mus musculus 50 Fubp3 ENSMUSG00000026843 ENSMUST00000113477 2 1 4 115 2 31468616 31471024 AACAAGTCCCAAGTCATCC 59 31471102 31471121 TAAAGTCTGCCCATAGAAGG 58 NA Mus musculus 50 Lhx6 ENSMUSG00000026890 ENSMUST00000112967,ENSMUST00000112966 1 2 7 81 2 35946536 35946554 GACGACATCCACTACTCTC 58 35939587 35946493 AAGGATGACTCTCAATGTAGC 59 NA Mus musculus 50 Brd3 ENSMUSG00000026918 ENSMUST00000113941,ENSMUST00000077737,ENSMUST00000028282 3 3 3 81 2 27319460 27319480 AAGACACTCTGGAAACATCAG 59 27319103 27319420 TATGATAATCAGGCAGGTTCAG 59 NA Mus musculus 50 Fastkd1 ENSMUSG00000027086 ENSMUST00000073152,ENSMUST00000102706 1 2 2 86 2 69545753 69546576 GGACTTAAGGGCCTTATCTG 59 69545686 69545704 TCTGTTCTGATCACCAGTC 58 NA Mus musculus 50 Pacsin3 ENSMUSG00000027257 ENSMUST00000059566,ENSMUST00000028694,ENSMUST00000111349 1 3 3 80 2 91103034 91103052 GGCTTCTCTTCTTCAAGGA 58 91103096 91103229 GGAGTTCATGGAACTTGTC 58 NA Mus musculus 50 4930402H24Rik ENSMUSG00000027309 ENSMUST00000044766,ENSMUST00000103190,ENSMUST00000110248,ENSMUST00000110247 2 4 6 84 2 130623997 130632620 ACATGCTTTCAGAAGACCT 58 130623931 130623949 AGCAGGAAAGGGATTTCTG 59 NA Mus musculus 50 Trpm7 ENSMUSG00000027365 ENSMUST00000028843 1 1 3 84 2 126633079 126633097 ACTCTGAAACATGTGGGTG 59 126630809 126633032 TACTACAGCTTTCTTGCACC 59 NA Mus musculus 50 Eif6 ENSMUSG00000027613 ENSMUST00000029142,ENSMUST00000109639,ENSMUST00000109638 2 3 3 86 2 155652134 155652152 GTTCGAGAACAACTGTGAG 58 155652066 155652084 TAGAAGTTCTCTGAGCCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ctnnbl1 ENSMUSG00000027649 ENSMUST00000103125 3 1 2 96 2 157614862 157625177 ATACAGATGTGTCCATAGCTG 59 157625235 157625253 TCGATGAGAACTTCTGCTC 59 NA Mus musculus 50 2610036D13Rik ENSMUSG00000027650 ENSMUST00000029179,ENSMUST00000109522 2 2 2 82 2 157826409 157826428 CAGTTTGTACTGAGCTACCT 59 157822952 157826364 GACTGCACCTCTTCTTCAG 59 NA Mus musculus 50 Postn ENSMUSG00000027750 ENSMUST00000081564,ENSMUST00000073012,ENSMUST00000107985,ENSMUST00000107983 1 4 4 80 3 54177710 54177731 CTCTACAATGGACAGATACTGG 59 54177772 54178954 TTCTATGCAGATAGCCGTC 58 NA Mus musculus 50 Dclk1 ENSMUSG00000027797 ENSMUST00000054237,ENSMUST00000089805,ENSMUST00000107963 1 3 4 80 3 55051383 55051401 GGGTGAGAACCATCTACAC 59 55051444 55059801 AGACATAGCTTTCACCTTCC 59 NA Mus musculus 50 Dclk1 ENSMUSG00000027797 ENSMUST00000089805,ENSMUST00000070418 1 2 4 148 3 55266967 55266985 AAGTCACCAAGTCCATCAC 59 55281806 55284268 TCCTCAGACTCTTCTTCCC 59 NA Mus musculus 50 Col11a1 ENSMUSG00000027966 ENSMUST00000092155,ENSMUST00000029582 3 2 5 83 3 113793109 113793128 CCATTACAGTCCAGATTGTG 58 113793173 113798135 TCATCCACAATATTTGCCTC 57 NA Mus musculus 50 Gstcd ENSMUSG00000028018 ENSMUST00000029651,ENSMUST00000080583 3 2 3 123 3 132646174 132649357 GACTCATAGGGAAGCAGTG 59 132646069 132646087 ATGTTGTTCTTGGGAGAGC 59 NA Mus musculus 50 Pitx2 ENSMUSG00000028023 ENSMUST00000029657,ENSMUST00000106382,ENSMUST00000042587 1 3 3 136 3 128918642 128918660 TCATTTCACTAGCCAGCAG 59 128918760 128921267 GATTCTTGAACCAAACCCG 59 NA Mus musculus 50 Dapp1 ENSMUSG00000028159 ENSMUST00000029806,ENSMUST00000098582 2 2 2 83 3 137598627 137600714 GTAAACTGTTTCTGCCTAGTG 58 137598564 137598582 TTTGATCCATTCATCGGCT 59 NA Mus musculus 50 Lphn2 ENSMUSG00000028184 ENSMUST00000106128 3 1 4 81 3 148491450 148491468 CAGATTCTAGCAGGTTGGA 58 148490194 148490515 TCTTCATAGCCAGGTAAGTC 58 NA Mus musculus 50 Tnc ENSMUSG00000028364 ENSMUST00000107372,ENSMUST00000070019 3 2 8 93 4 63643947 63645501 CATTACAGAAGCTGAACCG 58 63643872 63643890 TATCCCTTCATCAGCAGTC 58 NA Mus musculus 50 Snapc3 ENSMUSG00000028483 ENSMUST00000107225,ENSMUST00000071544,ENSMUST00000030206 2 3 3 91 4 83082299 83082317 AATTTGCTGTGTCAGTGAC 58 83082372 83087803 ACTTGTAGAGGTCTTTGCT 58 NA Mus musculus 50 Sh3gl2 ENSMUSG00000028488 ENSMUST00000107188,ENSMUST00000030212 2 2 4 116 4 85031724 85031742 GGAATATCAGCCCAAACCA 59 85031822 85033473 TGATCCATTTGGACACCTG 59 NA Mus musculus 50 Hook1 ENSMUSG00000028572 ENSMUST00000107083,ENSMUST00000030306 1 2 2 82 4 95656329 95656347 TGATGTAGCTTGGTTCAGC 59 95656390 95658849 GGTTACTAGCCTTTATTCTCCA 59 NA Mus musculus 50 Yars ENSMUSG00000028811 ENSMUST00000106054,ENSMUST00000001365 2 2 2 82 4 128874460 128874478 CCATGCTGGAGAGTATTGG 59 128874524 128877979 TGTGTACTCTTTGCTGAGC 59 NA Mus musculus 50 AU040320 ENSMUSG00000028830 ENSMUST00000102608,ENSMUST00000102607 1 2 3 80 4 126545938 126545956 AACCTCATCTACCAACAGC 59 126545999 126546601 GTTCTGTAGTCTGAGCTGAG 59 NA Mus musculus 50 Kcnab2 ENSMUSG00000028931 ENSMUST00000030768,ENSMUST00000105648 1 2 2 80 4 151767226 151767861 GAGCAATACAGGTCCTTCC 59 151767164 151767182 TGCTGTAGGGTTTATTGCC 59 NA Mus musculus 50 Espn ENSMUSG00000028943 ENSMUST00000105658,ENSMUST00000105653,ENSMUST00000105659,ENSMUST00000030785,ENSMUST00000084114,ENSMUST00000070018,ENSMUST00000080042,ENSMUST00000105657,ENSMUST00000103196,ENSMUST00000105656,ENSMUST00000105655,ENSMUST00000105654 2 12 13 71 4 151504881 151504899 CGTTCCTCGTCTTCTACTG 59 151502613 151502631 AAGCTCTGAGTTATCACCC 58 NA DesignNoJunction Mus musculus 50 Car6 ENSMUSG00000028972 ENSMUST00000030817,ENSMUST00000105683 3 2 2 86 4 149570222 149570242 TTCAATAAGGAATACGGGACC 59 149567878 149570177 CTCGTCAATCTTAAACAAGACG 59 NA Mus musculus 50 Ttll10 ENSMUSG00000029074 ENSMUST00000051509,ENSMUST00000105577,ENSMUST00000097731,ENSMUST00000030951 3 4 4 81 4 155421309 155421473 CAACGGAGCATCAATAATCAG 59 155421248 155421266 CTTGTAGTCCTCACAGTGG 59 NA Mus musculus 50 Plb1 ENSMUSG00000029134 ENSMUST00000101377,ENSMUST00000101382,ENSMUST00000101376 3 3 3 83 5 32567323 32572184 CCCAGAAATTCCTCTAGCC 59 32572732 32572750 CATACATCCTGTGGTTGGT 59 NA Mus musculus 50 Cdkl2 ENSMUSG00000029403 ENSMUST00000069937,ENSMUST00000086978,ENSMUST00000113143,ENSMUST00000113140 1 4 4 82 5 92466381 92468274 AGTTACTAAAGCAACTGCG 58 92466317 92466335 AAAGACTAGGTACCAACGT 57 NA Mus musculus 50 Cabp1 ENSMUSG00000029544 ENSMUST00000031519,ENSMUST00000112112 2 2 3 69 5 115636032 115636050 AAGTCGCCACTAAGAAACC 59 115625523 115626258 CTCGGAGCTCTTCAATCTC 59 NA DesignRelaxed Mus musculus 50 Zfml ENSMUSG00000030016 ENSMUST00000089597,ENSMUST00000032088 2 2 5 106 6 83928069 83928993 CAAATCGAAAGAGGAACCA 57 83929063 83929081 TTAATGGATTCTGCTTGGC 58 NA Mus musculus 50 Dusp16 ENSMUSG00000030203 ENSMUST00000065273 2 1 3 102 6 134708705 134708723 ATGTTGGTTCTCTGTCGTC 59 134675997 134708639 TTCTGTTGCATCAGGTCTG 59 NA Mus musculus 50 Ift122 ENSMUSG00000030323 ENSMUST00000112925,ENSMUST00000038234 3 2 3 86 6 115870398 115870416 AACCCTCTTCAACATCTCC 58 115870463 115873298 GTGAAGAGTGTATTCACTTTGG 59 NA Mus musculus 50 5730507A09Rik ENSMUSG00000030518 ENSMUST00000032731 3 1 2 148 7 72001086 72001104 TTACCTTCTTCATGCTGCT 58 71974985 71986995 TTGGACACAAAGCTTACCA 59 NA Mus musculus 50 Mphosph10 ENSMUSG00000030521 ENSMUST00000032735 2 1 2 80 7 71533798 71533816 CCAGACGAAGAGAAAGAGG 59 71532488 71533756 GTCATTATCTTCATCCGTGTC 58 NA Mus musculus 50 Sytl2 ENSMUSG00000030616 ENSMUST00000032846,ENSMUST00000107211,ENSMUST00000098310 1 3 4 80 7 97540950 97543677 TTCTTCAAGATGAGAGCGA 58 97543721 97543739 GGCTCTTCTTGTATCTCCT 58 NA Mus musculus 50 Fgfr2 ENSMUSG00000030849 ENSMUST00000033138,ENSMUST00000106209,ENSMUST00000068807 2 3 4 129 7 137328888 137339697 AGACAGGTAACAGTTTCGG 59 137328777 137328795 GCAACTCATACTCGGAGAC 59 NA Mus musculus 50 4930519F16Rik ENSMUSG00000031325 ENSMUST00000033688,ENSMUST00000061184 1 2 3 80 X 100429407 100429425 TAGTACATCCCTGAAGAGC 57 100428265 100429364 CCAAGTTTCTTGCTACTCTG 58 NA Mus musculus 50 Gpm6b ENSMUSG00000031342 ENSMUST00000112236,ENSMUST00000060210,ENSMUST00000112228,ENSMUST00000112229 3 4 12 81 X 162821867 162821887 TTCTACATGTCCTATCACCTG 58 162821930 162824899 TCATGAGGAAGTGGATCAG 58 NA Mus musculus 50 Uchl5ip ENSMUSG00000031371 ENSMUST00000077243 1 1 2 80 X 70692473 70698353 CCAGGATCTTCTAATGTGCT 59 70692412 70692431 ATGACCAGACGAAGTTTCTG 59 NA Mus musculus 50 Irak1 ENSMUSG00000031392 ENSMUST00000033769 2 1 13 80 X 71263286 71263304 GCTCTGTGGAACTAAGTGG 59 71262835 71263246 CTAGTCTCTTGTATACCTGTTCC 59 NA Mus musculus 50 Arhgef7 ENSMUSG00000031511 ENSMUST00000110911,ENSMUST00000074856 3 2 7 90 8 11822037 11831498 ACCCTGAACTCAAGTTCAC 59 11831551 11831570 CATTGCTCTTGGTTTCTTCG 59 NA Mus musculus 50 Cdyl2 ENSMUSG00000031758 ENSMUST00000109101 3 1 2 261 8 119132236 119132254 AAGAAGCAGGTGAGTATGC 59 119113312 119118869 TCCTTCATGATCTCAGGAG 57 NA DesignRelaxed Mus musculus 50 Gpr83 ENSMUSG00000031932 ENSMUST00000115626,ENSMUST00000115625,ENSMUST00000034408,ENSMUST00000115624 1 4 4 80 9 14671414 14672625 CCTTCAAGTACAGTGAGGAC 59 14672666 14672686 GATACTTCCAGAAGAGGTCAG 59 NA Mus musculus 50 Cog2 ENSMUSG00000031979 ENSMUST00000034460,ENSMUST00000108803,ENSMUST00000093038 1 3 3 80 8 127057223 127057242 CCACCATTGATAAGACACAG 58 127057285 127059308 CGACGATTACCTCATTGAC 57 NA Mus musculus 50 Bace1 ENSMUSG00000032086 ENSMUST00000034591,ENSMUST00000078111 3 2 2 87 9 45667132 45667369 TCCTTCCTCAGCAATACCT 59 45667420 45667438 GTGGATGACTGTGAGACAG 59 NA Mus musculus 50 Ldlr ENSMUSG00000032193 ENSMUST00000070068 1 1 2 87 9 21548432 21548450 GATGTGAATTTGGTGGCTG 59 21548501 21550187 CAGTGTCGACTTCTCTAGG 58 NA Mus musculus 50 Neo1 ENSMUSG00000032340 ENSMUST00000114096 2 1 3 97 9 58736271 58736289 GAGGACAGCATGTCTACAC 59 58728647 58736213 GTATTTCGAACAGATTGCTGAG 59 NA Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113696,ENSMUST00000113701,ENSMUST00000113697,ENSMUST00000113689,ENSMUST00000050905,ENSMUST00000113684 1 6 16 118 9 66879308 66880280 AGGATAAGTACTCTCAGAAGGA 59 66878858 66878879 CTCCAATTTGGTTACTGATCTC 58 NA Mus musculus 50 Dis3l ENSMUSG00000032396 ENSMUST00000068367,ENSMUST00000113890 1 2 2 80 9 64155281 64155302 AACAAGATCATCTCTACCACAG 59 64155141 64155242 GACAGAAATTCTTACCGTCAC 58 NA Mus musculus 50 Zcwpw2 ENSMUSG00000032443 ENSMUST00000111769,ENSMUST00000035017 3 2 2 93 9 117873595 117873613 AAGACTAGAAGTGTGCTGC 59 117857008 117869088 TTTGGAAACTTGCATCCCT 59 NA Mus musculus 50 Nlrp3 ENSMUSG00000032691 ENSMUST00000108758 2 1 4 107 11 59371957 59371976 GACCAGACTGTACATTGGAG 59 59372045 59379355 TTGTCTAATCCCAGCTTCTG 59 NA Mus musculus 50 Atg12 ENSMUSG00000032905 ENSMUST00000035648 1 1 1 60 18 46894917 46894935 GACCAAGAAGTTGGAACTC 57 46894130 46894148 AATGCAGGACCAGTTTACC 59 NA DesignNoJunction Mus musculus 50 A130042E20Rik ENSMUSG00000033126 ENSMUST00000049185 3 1 1 77 10 75930912 75930930 CTGACGTGCTTTCTTTCTC 58 75929062 75929082 TATAATCATCCGGTGAGTGTG 59 NA DesignNoJunction Mus musculus 50 1700124K17Rik ENSMUSG00000033237 ENSMUST00000096250,ENSMUST00000058749 2 2 4 89 15 96180550 96187135 CGTGTCAGATTATCTACGTC 57 96187187 96187205 GATAACAGTGAAAGCACCA 57 NA Mus musculus 50 Ipo13 ENSMUSG00000033365 ENSMUST00000106417,ENSMUST00000036156 1 2 2 80 4 117575862 117576015 GGCAGAAGAGATACCTAATCC 59 117575802 117575820 AGTGTGGTAAAGAGGTTGG 59 NA Mus musculus 50 Larp5 ENSMUSG00000033499 ENSMUST00000091829,ENSMUST00000091828 3 2 3 96 13 9157399 9157418 AATGGGTTTACATCTCCGAC 59 9157473 9157816 GATGAGACTTACTAGGATTCCTG 59 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111694,ENSMUST00000111678,ENSMUST00000099941,ENSMUST00000111685,ENSMUST00000111684,ENSMUST00000111691,ENSMUST00000111697,ENSMUST00000067232,ENSMUST00000036811 3 9 23 118 2 84453181 84453199 TCATCGTGAAATCCCACAG 59 84452695 84453099 AGAACCACTCATCTTTGCC 59 NA Nonspecific Mus musculus 50 Arhgap27 ENSMUSG00000034255 ENSMUST00000107024,ENSMUST00000041385 3 2 4 89 11 103199702 103200011 AGAGACTTCGGAAGAAACAC 59 103199632 103199650 CAGCTGAGGTCTTTGAGTC 59 NA Mus musculus 50 Six4 ENSMUSG00000034460 ENSMUST00000110487,ENSMUST00000043208 1 2 2 103 12 74209723 74209741 ATCCCTAATTCTGGAGCCA 59 74205216 74209659 GAAAGATTACCTTGTGAAGCTG 59 NA Mus musculus 50 Wdr78 ENSMUSG00000035126 ENSMUST00000036451,ENSMUST00000116316 3 2 5 82 4 102732533 102732551 TCTTGGTGTCCATATCAGC 59 102722789 102732488 TAGATGTTCGTGTCCATGAC 59 NA Mus musculus 50 Mitf ENSMUSG00000035158 ENSMUST00000113340 3 1 7 114 6 97953897 97953915 ACTTGATCGACCTCTACAG 58 97953992 97960401 CTTCTTCGTTCAACTGTGAG 58 NA Mus musculus 50 1110059E24Rik ENSMUSG00000035171 ENSMUST00000038830 1 1 1 90 19 21693632 21693650 AGTGGCGTGTAAAGTACAG 59 21673320 21673340 TGGTAAGAGTCCTTTACTGTC 58 NA DesignNoJunction Mus musculus 50 Rcbtb1 ENSMUSG00000035469 ENSMUST00000043227,ENSMUST00000111255,ENSMUST00000022551 1 3 5 80 14 59849308 59849327 CATCAAGCGAGGAATTACTG 58 59849370 59854066 TCTTCTAAATCCTCTGCGT 57 NA Mus musculus 50 Oxsr1 ENSMUSG00000036737 ENSMUST00000040853,ENSMUST00000111715 3 2 2 81 9 119193718 119193736 CAACCATTGCTACAATCCT 57 119182094 119193674 TTCACATCTCTGTGAATCTG 57 NA Mus musculus 50 Foxa2 ENSMUSG00000037025 ENSMUST00000109964,ENSMUST00000047315,ENSMUST00000109963 3 3 3 77 2 147870488 147870506 ACATACATGAGCATGTCCG 59 147870429 147870447 GGATGACATGTTCATGGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Slc35b2 ENSMUSG00000037089 ENSMUST00000041353,ENSMUST00000113541 1 2 2 108 17 45701931 45701949 CTCCTGATGAGGTTCTCCT 59 45702021 45703268 AGATAGGACACCTGGAGAC 59 NA Mus musculus 50 Osbpl5 ENSMUSG00000037606 ENSMUST00000020411 3 1 2 82 7 150880994 150881012 ACATCAACCAGATTTCCGG 59 150880836 150880950 AAATACATCTCTGTCCCAGTG 59 NA Mus musculus 50 Cep250 ENSMUSG00000038241 ENSMUST00000109619,ENSMUST00000039994,ENSMUST00000109618,ENSMUST00000094421 3 4 4 83 2 155790764 155790782 CTCAATCTATGGCGAGAGG 59 155790829 155791064 TAGCTCTGTCAGGTCTCTG 59 NA Mus musculus 50 Smurf1 ENSMUSG00000038780 ENSMUST00000085684,ENSMUST00000100461 1 2 3 182 5 145657424 145657442 GAAATCCTGAGGTTCGAGG 59 145654163 145655347 CACTGTTAAGGTCTCTGGG 59 NA Mus musculus 50 Ube2h ENSMUSG00000039159 ENSMUST00000102993 2 1 2 139 6 30191420 30192551 AACATTGATGAAGCGTCAG 58 30171724 30171743 CCATTGAGAGGATCTATGGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Wdr45 ENSMUSG00000039382 ENSMUST00000043045,ENSMUST00000116634,ENSMUST00000115689,ENSMUST00000115690,ENSMUST00000115687 3 5 8 80 X 7304145 7304164 TTTGATACCCAATCCAAGGA 58 7304205 7304308 GCTGAAGTTAATGCAGTACAG 59 NA Mus musculus 50 Cntnap2 ENSMUSG00000039419 ENSMUST00000069147 1 1 3 94 6 45942073 45951178 ATCTAGGTTTCAACCAGCT 58 45951236 45951254 AATGAGTACAGAGTGCCAG 58 NA Mus musculus 50 Timeless ENSMUSG00000039994 ENSMUST00000105244,ENSMUST00000055539,ENSMUST00000105245,ENSMUST00000105241 2 4 8 95 10 127687156 127687348 CTTCTTGCATGCAGAATGG 59 127687407 127687425 CTTCACTTTCGTCCTCTGG 59 NA Mus musculus 50 Lyrm5 ENSMUSG00000040370 ENSMUST00000111725,ENSMUST00000039729,ENSMUST00000111724,ENSMUST00000111726,ENSMUST00000111723,ENSMUST00000111721,ENSMUST00000111719 3 7 7 137 6 145163762 145163780 CGAGGAGAAGTACTGACTC 58 145163960 145163978 TTTGATCTTCTCTGGGTCC 58 NA DesignNoJunction Mus musculus 50 Adam22 ENSMUSG00000040537 ENSMUST00000088762,ENSMUST00000088745,ENSMUST00000115388 2 3 13 155 5 8090246 8092352 CTAACTCAACTGAGAGGGAG 58 8082238 8082256 ATGAAGAAGGAGACTTGGC 59 NA Mus musculus 50 Wbscr27 ENSMUSG00000040557 ENSMUST00000111221,ENSMUST00000068617 2 2 5 238 5 135409382 135409400 GTGGATTGTCTCAGTCGAG 59 135410289 135416339 CAAACAAGTCCACCTTCAG 58 NA DesignRelaxed Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000111370,ENSMUST00000099723,ENSMUST00000111369,ENSMUST00000049326 3 4 17 88 2 90982972 90982990 CAGGACATGAAGACTGGAG 59 90978902 90982921 AATTTCAGGAACTGGTTGTG 58 NA Mus musculus 50 Tmem146 ENSMUSG00000040828 ENSMUST00000051258 1 1 2 80 17 56793110 56793128 CTTCGACAAGTGTACAGTG 58 56793171 56794530 CTGACCATGACATTACATGG 58 NA Mus musculus 50 Arhgef10l ENSMUSG00000040964 ENSMUST00000039204,ENSMUST00000105799 3 2 7 105 4 140139836 140142706 ATTGTAAGATGACCCAGCTC 59 140139750 140139769 TTCCTATGCAGAAAGGAGAC 59 NA Mus musculus 50 Dcp1b ENSMUSG00000041477 ENSMUST00000112777,ENSMUST00000073909 3 2 2 80 6 119133728 119133749 AGAACCCATTACTAAAGACCTG 59 119133790 119148958 CCATAAATGGACAGTGTGC 58 NA Mus musculus 50 Zfp410 ENSMUSG00000042472 ENSMUST00000110285 2 1 2 154 12 85672714 85672733 TAAGCAGTTCACTACAGCTG 59 85673968 85676029 CAATCTCCAGCTCTGAGTG 59 NA Mus musculus 50 Olfr1260 ENSMUSG00000042894 ENSMUST00000111512 2 1 2 144 2 89816174 89816192 GTGATATGTCCCTTGTCCC 59 89817955 89817973 GCAGGATGAATTCTGTCAC 58 NA DesignNoJunction, InUTR Mus musculus 50 Mrpl50 ENSMUSG00000044018 ENSMUST00000057829 2 1 1 60 4 49527268 49527286 AACTGGCAAGATATCTCCC 58 49527226 49527245 CTAAGCCTGCTAAGAGTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2310057J16Rik ENSMUSG00000044433 ENSMUST00000057028,ENSMUST00000111066 3 2 2 87 8 3608434 3608453 GTTTATCATCCACAATGCCT 58 3608500 3608606 CTCGATTTCCTCTAGAATTCTG 58 NA Mus musculus 50 Magi1 ENSMUSG00000045095 ENSMUST00000055224 3 1 4 80 6 93630863 93632955 CCAGAATATGCGATGATCC 57 93630801 93630819 CATAAGGTAGAAGCAAGCC 57 NA Mus musculus 50 Zfp691 ENSMUSG00000045268 ENSMUST00000052715,ENSMUST00000106355 2 2 2 62 4 118843394 118843412 CAGAGACAGATGAGAAGCT 58 118843350 118843368 TGGAGGTATTGTTGAAGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 4921515J06Rik ENSMUSG00000045662 ENSMUST00000059946,ENSMUST00000106586 3 2 4 118 3 108761535 108761554 GCATGTTGGATATTGTACCC 58 108761634 108762843 AGGAGGTTGTATAAACAGGT 57 NA Mus musculus 50 Tmem104 ENSMUSG00000045980 ENSMUST00000100235,ENSMUST00000061450 3 2 3 86 11 115066890 115089745 TCTATCTGGCCATCTTCAC 58 115089795 115089813 TAGAGGTCAAGATCTGCAG 58 NA Mus musculus 50 Sbsn ENSMUSG00000046056 ENSMUST00000080518 2 1 1 93 7 31539829 31539847 GGTCTCATCAAGGTCAAGG 59 31540024 31540043 ATAAATGGCTTGTTGACCGA 59 NA DesignNoJunction Mus musculus 50 Bdh1 ENSMUSG00000046598 ENSMUST00000089759,ENSMUST00000115227,ENSMUST00000115226 3 3 3 86 16 31450040 31455120 ATCCTGAGAAGGGAATGTG 58 31455169 31455188 TATATGTCTCCATGCTGGTG 58 NA Mus musculus 50 Zbtb44 ENSMUSG00000047412 ENSMUST00000061588 2 1 3 149 9 30869696 30871768 AGATGACGATGACAGATTGG 59 30871880 30871898 TTCTGAATACGGGTGAAGC 59 NA Mus musculus 50 4930528A17Rik ENSMUSG00000047840 ENSMUST00000062777 3 1 1 86 4 21775192 21775211 CATGAACAAGACAAGATGGC 59 21775125 21775143 AATCAGTGTGACTTCAGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tex18 ENSMUSG00000048477 ENSMUST00000053363 2 1 1 61 10 86377156 86377175 AATCATTGCCCTTTGATGTG 59 86377199 86377217 CACACCCTGGATACTTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1110034B05Rik ENSMUSG00000048495 ENSMUST00000079998,ENSMUST00000097732 1 2 2 80 1 57447532 57447551 CACTCTTTCCTAAAGCAAGG 58 57445582 57447490 TATGGAACCATAAAGCAGGA 58 NA Mus musculus 50 Trappc1 ENSMUSG00000049299 ENSMUST00000102602,ENSMUST00000060956,ENSMUST00000102601 2 3 4 86 11 69137960 69138336 CTAGACATGAAGGATGGCT 58 69138386 69138404 GACAACCTTGATTCCAGTG 58 NA Mus musculus 50 Gemin4 ENSMUSG00000049396 ENSMUST00000102500 2 1 1 60 11 76026856 76026874 AAATACTTGCCATCCTCAG 57 76026814 76026832 CTGGGTCAGACTTAAACCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Aftph ENSMUSG00000049659 ENSMUST00000035350 2 1 2 86 11 20592580 20598323 TTTAGATGGTGTGGATCCAG 59 20592513 20592532 AATGCATCAGTCACTCTGAG 59 NA Mus musculus 50 Siglech ENSMUSG00000051504 ENSMUST00000094360 2 1 2 83 7 63024524 63026979 TCAATGTCACCTGGAAACC 59 63027023 63027044 CAAGAAGCAGGAATTTGATAGC 59 NA Mus musculus 50 Fgfr3 ENSMUSG00000054252 ENSMUST00000114411 2 1 4 110 5 34072976 34073940 TACTCAAGTCCTGGATCAG 57 34074014 34074032 CTATGAAATTGGTGGCTCG 58 NA Mus musculus 50 Atrnl1 ENSMUSG00000054843 ENSMUST00000059255 1 1 2 144 19 57789176 57789194 GTACTATGGAGACCCAACC 58 57806130 57806275 GAACTGACAATACAGCTGG 58 NA Mus musculus 50 Mtap6 ENSMUSG00000055407 ENSMUST00000068973,ENSMUST00000107100 1 2 2 62 7 106464383 106464401 TACAGTGAGCCTTTCAAGG 59 106484509 106484527 TTAGATGCATCACTGGTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Col8a2 ENSMUSG00000056174 ENSMUST00000070132,ENSMUST00000106130 2 2 2 83 4 125986968 125986986 GTAAAGTATGTGCAGCCCA 59 125987031 125987634 TAGAGGCATTTCCAAGTACTG 59 NA Mus musculus 50 Scn3a ENSMUSG00000057182 ENSMUST00000100069,ENSMUST00000066432,ENSMUST00000045256 1 3 3 143 2 65335536 65335554 CCTTCCTGATAGTGTTCCG 59 65333438 65335429 GGAAGAGGTTCAGAACCAC 59 NA Mus musculus 50 Atp5sl ENSMUSG00000057229 ENSMUST00000077338,ENSMUST00000085953 1 2 2 80 7 26407375 26407393 CATCCAGGAGAAATATGGC 57 26407437 26408829 TTGTCCTGAAACTTCACTG 57 NA Mus musculus 50 Abi1 ENSMUSG00000058835 ENSMUST00000078977,ENSMUST00000093171,ENSMUST00000114544 1 3 4 80 2 22826652 22826671 CGTCCTGTCAGGTATATTCG 59 22818010 22826611 GTTATTTCCGTGCTTAACTCC 59 NA Mus musculus 50 6030490I01Rik ENSMUSG00000059000 ENSMUST00000079404 1 1 1 96 17 32958765 32958783 GAAACAAATGGGAACACCA 58 32958009 32958029 TCGGTATATTCACAGAGTCTC 58 NA DesignNoJunction Mus musculus 50 OTTMUSG00000010328 ENSMUSG00000059218 ENSMUST00000105769,ENSMUST00000075045 1 2 2 80 4 143400756 143401416 TTATAGAATGTCTCAGGTGCC 59 143400696 143400714 CCAAGTCTGACTGTGAGAG 59 NA Nonspecific Mus musculus 50 Magea1 ENSMUSG00000059539 ENSMUST00000101133,ENSMUST00000078193 3 2 2 75 X 151523366 151523385 TGCGAGATGAGATATACAGG 58 151523310 151523328 TAGAATGTGAGCAGGTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Unc5c ENSMUSG00000059921 ENSMUST00000075282,ENSMUST00000106235 1 2 3 85 3 141434139 141449832 CATGCAGGGATTCATTTACC 58 141451837 141451855 CATCATCTGAGTCAGGAGC 59 NA Mus musculus 50 Grb2 ENSMUSG00000059923 ENSMUST00000106497,ENSMUST00000021090,ENSMUST00000106495 3 3 5 96 11 115511153 115511171 AGAAATGCTCAGCAAACAG 58 115508183 115511093 ATTTCCAAACTTGACGGAC 58 NA Nonspecific Mus musculus 50 Casc4 ENSMUSG00000060227 ENSMUST00000089912,ENSMUST00000089915 3 2 4 91 2 121732435 121732453 ACAACTCAAACGAGTTGGT 59 121732508 121737618 TTAGATGTGAACCAGCAGG 59 NA Mus musculus 50 Kalrn ENSMUSG00000061751 ENSMUST00000076810,ENSMUST00000074924,ENSMUST00000114968,ENSMUST00000114961,ENSMUST00000089655,ENSMUST00000114960,ENSMUST00000114957 3 7 13 100 16 34314435 34332217 ACTCCATGAATGCCTATGTC 59 34314354 34314372 GGAGATCTGCTTGATTTGC 58 NA Mus musculus 50 Actg1 ENSMUSG00000062825 ENSMUST00000106215 2 1 5 112 11 120209368 120209386 CACTCGTCATTGACAATGG 58 120208655 120209292 AAACATTATCTGGTGTCGG 57 NA DesignRelaxed Mus musculus 50 Cd300lb ENSMUSG00000063193 ENSMUST00000074300,ENSMUST00000106581 1 2 2 80 11 114787387 114787406 TTCTAATCAACTTCCCTGGC 59 114786364 114787346 ATGTAATAGGTCCTCTTCTGC 58 NA Mus musculus 50 Ddo ENSMUSG00000063428 ENSMUST00000044351 3 1 4 130 10 40357210 40357228 TGGGATTTCGAAAGATGAC 57 40357322 40393504 GGTCTCAAATGACCTTCTC 57 NA Mus musculus 50 D14Ertd668e ENSMUSG00000068245 ENSMUST00000095157,ENSMUST00000089448 1 2 2 104 14 59973205 59973987 CACTGAAAGTGCTGATGAC 58 59972193 59972212 GCGTTACTACATTTCATCGT 58 NA Mus musculus 50 Gm608 ENSMUSG00000068284 ENSMUST00000096063,ENSMUST00000089542 2 2 2 60 16 44221215 44221234 GTCTTTGATCCAAGTCTTCC 58 44221256 44221275 GTCCAAGAATCATACTGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cry2 ENSMUSG00000068742 ENSMUST00000090559,ENSMUST00000111278 1 2 2 80 2 92254096 92256322 TTGTACAAGAAGGTGAAGAGG 59 92254036 92254055 TGTGTAGAAGAATTCTCGCC 59 NA Mus musculus 50 Etnk2 ENSMUSG00000070644 ENSMUST00000094555 1 1 2 80 1 135271180 135273493 GTTTGCAGGTGTGAATGTG 59 135273536 135273555 TCAAGATAATAACGCAGCCA 59 NA Mus musculus 50 Zfp817 ENSMUSG00000071291 ENSMUST00000076123 1 1 1 125 13 67594987 67595005 TTCTGGAGCAAAGACAAGG 59 67593024 67593042 GAGTAAGCAGTGACTTGCA 59 NA DesignNoJunction Mus musculus 50 Sept5 ENSMUSG00000072214 ENSMUST00000096987 1 1 2 90 16 18623474 18623492 GTTATTGGCAGCAACACTG 59 18623322 18623420 CCTGATTCTCCACTTCGAC 59 NA Mus musculus 50 EG432637 ENSMUSG00000073168 ENSMUST00000110973,ENSMUST00000101547 2 2 2 60 12 22186385 22186406 CTCTACAAAGATATGATGCTGG 58 22186146 22186366 CCCAAGTGTAGCCTATAACAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Iqck ENSMUSG00000073856 ENSMUST00000106547 2 1 2 212 7 125999474 126016351 GGAGTATGAAGCTGAGCAG 59 126019883 126021129 TAATCTCTGGGTGAACAGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Foxr1 ENSMUSG00000074397 ENSMUST00000114742 2 1 2 82 9 44242102 44243519 TACAGTTTCACTCGAGAGC 59 44242038 44242056 AAACTGAGATTGTGACGGA 58 NA Mus musculus 50 Etohi1 ENSMUSG00000074519 ENSMUST00000108926 1 1 3 93 2 177766063 177766082 CCTATAGGAATCTCACAGCT 57 177766346 177767514 CTTTCATGCCTTCCATGAC 58 NA Nonspecific Mus musculus 50 TRAV6D-5 ENSMUSG00000076772 ENSMUST00000103582 3 1 1 67 14 53415169 53415187 TTTAAAGTCCCAAAGGCCA 59 53415216 53415236 GTCCCTTTATCATACGTAGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2ARV8_MOUSE ENSMUSG00000078872 ENSMUST00000108970,ENSMUST00000108969,ENSMUST00000108968 2 3 3 138 2 176859063 176868968 GGATTTAGTCACCTATGATGAC 58 176869064 176869291 CCAAATGTAACCTATAGCTGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 0610010B08Rik ENSMUSG00000078881 ENSMUST00000108994,ENSMUST00000108993 2 2 3 60 2 176277730 176277749 AGAACATACGATTGAAGACC 57 176277772 176278947 ACTTCTTTCATGCCTTCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 A2ART8_MOUSE ENSMUSG00000079103 ENSMUST00000110675,ENSMUST00000110676 3 2 2 80 2 120924132 120924150 GCAATTAGCACCAAGATGG 59 120922323 120924088 CTCAGAGGATCCTTCTGGA 59 NA Mus musculus 50 ENSMUSG00000068790 ENSMUSG00000079354 ENSMUST00000112595,ENSMUST00000112594,ENSMUST00000112593 2 3 3 60 14 20387594 20387613 TTCCATGCAGTACTCTAAGG 58 20386877 20387572 GTCCTCCTTAATGCTGTAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Utp14b ENSMUSG00000079470 ENSMUST00000053760 3 1 1 141 1 78659800 78659818 GCATATCACCAACTTTGGG 58 78660968 78660986 GATCTGGTCTCATCTTTGG 57 NA DesignNoJunction, InUTR Mus musculus 50 Rab7 ENSMUSG00000079477 ENSMUST00000113598,ENSMUST00000113597,ENSMUST00000113596,ENSMUST00000113600,ENSMUST00000095048 2 5 5 61 6 87950518 87954176 GCCCTTAAACAGGAAACAG 58 87950475 87950493 TCCAGTTTGATGGGTTCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000039752 ENSMUSG00000039752 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-153 ENSMUSG00000065538 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-193b ENSMUSG00000076972 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Txnrd3 ENSMUSG00000000811 ENSMUST00000113546,ENSMUST00000000828 2 2 2 60 6 89600564 89601497 GGAACTTGATCAAGTTGATGAC 59 89601516 89601536 GTTACTGATTTCTGTCAGCAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Fmr1 ENSMUSG00000000838 ENSMUST00000088546,ENSMUST00000114657,ENSMUST00000114651,ENSMUST00000101518,ENSMUST00000114655,ENSMUST00000114654,ENSMUST00000114653,ENSMUST00000114649 2 8 8 60 X 65944761 65948201 GAAGTTGAGGTTTATTCCAGAG 58 65948221 65948240 CTTTAGCTAACCACCAACAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Sec24b ENSMUSG00000001052 ENSMUST00000001079,ENSMUST00000098616 3 2 2 85 3 129710382 129710400 ACCTCCAACTCCTATTTGG 58 129708001 129710333 TACATCGAAACGAGTCTGG 59 NA Mus musculus 50 Sebox ENSMUSG00000001103 ENSMUST00000001130 2 1 1 105 11 78317334 78317352 CCTATCCTGACATCAGCAC 59 78317544 78317562 TCCTTGATTCTCTTGGCTC 58 NA DesignNoJunction Mus musculus 50 Irx2 ENSMUSG00000001504 ENSMUST00000074372,ENSMUST00000091507,ENSMUST00000109693 3 3 3 68 13 72768370 72768388 GAGGAGAGTTCAGACAAGG 58 72768420 72768718 GTGTAGACTGATCCCTTCG 59 NA DesignRelaxed Mus musculus 50 4933413G19Rik ENSMUSG00000001517 ENSMUST00000073316,ENSMUST00000112148 2 2 2 80 6 128319439 128319459 ACATCTACACTTGGATTGAGG 59 128319499 128320990 TGTGACGAATAGAGTTCTTCC 59 NA Mus musculus 50 Ppard ENSMUSG00000002250 ENSMUST00000002320 3 1 1 103 17 28423325 28423343 GAGGAGAAAGAGGAAGTGG 58 28423410 28432301 GAATTCTGGGAGAGGTCTG 59 NA Nonspecific Mus musculus 50 Narfl ENSMUSG00000002280 ENSMUST00000002350 3 1 1 90 17 25918712 25918730 AATATCCAGAACCTCGTGC 59 25918784 25918972 CATTCAAGCAACCTGAAGG 59 NA Mus musculus 50 Kifc2 ENSMUSG00000004187 ENSMUST00000004294 3 1 1 120 15 76491938 76491956 TAACAAGTCAGCTCTTGGC 59 76492038 76492166 GAAAGAGACCCATCTAGAGTG 59 NA Mus musculus 50 Psap ENSMUSG00000004207 ENSMUST00000105465,ENSMUST00000004316 2 2 2 82 10 59762241 59762259 TTTATGCCAGACCTGTCAG 59 59762303 59762542 CTTTAACTAGGAGCTCCTCAG 59 NA Mus musculus 50 Zfp324 ENSMUSG00000004500 ENSMUST00000038701 3 1 1 89 7 13554259 13554721 TAGACTCCATAGGACCTTCTG 59 13554771 13554790 TATTTGTCCTGTTGGGAACC 59 NA Mus musculus 50 Cic ENSMUSG00000005442 ENSMUST00000094696,ENSMUST00000005578 3 2 2 80 7 26072334 26072776 ATGATGTCATTGCTGATGAC 58 26072819 26072837 CACTTTCACTGTCAGTCAC 58 NA Mus musculus 50 Carkl ENSMUSG00000005951 ENSMUST00000006105 1 1 1 103 11 73028549 73028567 TGGTTTGAAATCCCAAAGG 58 73028634 73031310 ATGTTGAGAACTGCATCAG 57 NA Mus musculus 50 Tuft1 ENSMUSG00000005968 ENSMUST00000107278 1 1 3 80 3 94439376 94439394 GGACAAGATGACCCATGAG 59 94418099 94418649 TTCGATATCCTGACACTGC 59 NA Nonspecific Mus musculus 50 D17H6S56E-3 ENSMUSG00000007030 ENSMUST00000007245 2 1 1 92 17 35158493 35158511 TTGTCTTCACTGATGCCTC 59 35158567 35159605 CTAGAAATGTCACCCTGCA 59 NA Mus musculus 50 Tgfbr1 ENSMUSG00000007613 ENSMUST00000007757,ENSMUST00000044234,ENSMUST00000107725 3 3 3 81 4 47418512 47419799 CTGTTCTATTGGTGGAATCC 57 47419843 47419861 CATTTCTTCAACCGATGGA 57 NA Mus musculus 50 0610009B22Rik ENSMUSG00000007777 ENSMUST00000007921,ENSMUST00000109098 3 2 2 63 11 51499436 51499454 TTCATAGCTCATGCTGCTC 59 51499391 51499410 AGTACATGTTGTTGGAGAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nutf2 ENSMUSG00000008450 ENSMUST00000008594 2 1 1 69 8 108400268 108400286 CCTTACATGGGAAGGACAG 59 108400319 108400421 GAACGGAAGGCTAGATAGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Dqx1 ENSMUSG00000009145 ENSMUST00000077502 1 1 1 80 6 83014623 83014792 AAGCCTTTGTACAAAGTGGA 59 83014834 83014853 TACGGGCTTGACATAATGAC 59 NA Mus musculus 50 Rarres2 ENSMUSG00000009281 ENSMUST00000009425 2 1 1 108 6 48521876 48522094 AAGAAGTGCTCTTCTCAGC 59 48521786 48521805 TTTGGTTTGATTGTGCACTC 59 NA Mus musculus 50 Elk1 ENSMUSG00000009406 ENSMUST00000009550 2 1 1 186 X 20514400 20514418 TCACAATACAATCCCTGCA 58 20513779 20514250 GTTAGGATAACCTGCAGGG 59 NA Mus musculus 50 Dazl ENSMUSG00000010592 ENSMUST00000010736 1 1 1 80 17 50427985 50428003 TTTGCCAGATATGGCTCAG 59 50427472 50427941 TGAGACAAATCCATAGCCC 59 NA Mus musculus 50 Gltp ENSMUSG00000011884 ENSMUST00000012028 1 1 1 64 5 115124107 115124125 AACAAGGCCTATGAGATGG 59 115120597 115124079 GCCTTGAAGATCTTCTGCA 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Ptprs ENSMUSG00000013236 ENSMUST00000086828,ENSMUST00000067538,ENSMUST00000025037,ENSMUST00000113012,ENSMUST00000097302 1 5 5 127 17 56594395 56594413 GATCAGATTGGAGTGTCGG 59 56593741 56594304 AAGTCAATGGTCTCGAAGC 59 NA Mus musculus 50 BC039210 ENSMUSG00000014444 ENSMUST00000064316,ENSMUST00000059683,ENSMUST00000067252 2 3 3 81 8 125015072 125015090 AAATGCAGAGCAACTTCTG 58 125014917 125015030 ATCTCTTTGGGATCATAGTAGC 59 NA Mus musculus 50 Dguok ENSMUSG00000014554 ENSMUST00000113888,ENSMUST00000014698,ENSMUST00000101241 3 3 3 124 6 83440508 83440527 CAGACCCTTTCTTTCATGAG 58 83437114 83440423 GCAAAGATATACCTGTCACTG 58 NA Mus musculus 50 Sirt2 ENSMUSG00000015149 ENSMUST00000072965 2 1 1 87 7 29564002 29567798 ACACGCAGAACATAGACAC 59 29567849 29567867 TGTGATGTGTAGAAGGTGC 59 NA Mus musculus 50 Cd40 ENSMUSG00000017652 ENSMUST00000017799,ENSMUST00000073707,ENSMUST00000109305 3 3 4 129 2 164888654 164888971 GAGTTATGGAGATGGCCAC 59 164892003 164892023 TCCAAGTTCTTATCCTCACAG 59 NA Mus musculus 50 Wsb1 ENSMUSG00000017677 ENSMUST00000017821 1 1 1 82 11 79058055 79059680 AAGATGATGGAAACATGGTG 58 79057992 79058010 CATAGAACAGTCGGGAGAG 58 NA Mus musculus 50 Pmp22 ENSMUSG00000018217 ENSMUST00000108702,ENSMUST00000018361,ENSMUST00000108701,ENSMUST00000108700 1 4 4 87 11 62964744 62971754 TCTTCCAAATCCTTGCTGG 59 62971805 62971823 TAGTCAGTGTTGACATGCC 59 NA DesignNoJunction Mus musculus 50 1700081L11Rik ENSMUSG00000018412 ENSMUST00000106977,ENSMUST00000018556,ENSMUST00000106972,ENSMUST00000106971,ENSMUST00000106974,ENSMUST00000035872 1 6 7 80 11 104285280 104285299 GGGAGTCTGACATTGAAGAG 59 104240124 104285238 ATTCAGACCTACGTTTCAGG 59 NA Mus musculus 50 Ywhah ENSMUSG00000018965 ENSMUST00000019109 2 1 1 63 5 33369285 33369305 GGGTTATTAGTAGCATTGAGC 58 33369329 33369348 ACTTTCTCCAACTTCTTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ppp1r12a ENSMUSG00000019907 ENSMUST00000105279,ENSMUST00000070663 3 2 2 80 10 107704468 107705637 TGTTTCCAGGTATGACAGC 59 107705680 107705699 TAACTGTATGAAGCAGAGCG 59 NA Mus musculus 50 Rufy2 ENSMUSG00000020070 ENSMUST00000092458,ENSMUST00000062600,ENSMUST00000020264 1 3 3 80 10 62457503 62458061 TAAACAGACAACTCAACAGC 58 62458103 62458122 CGATCAGCTTAGTGTTTGAC 58 NA Mus musculus 50 Supv3l1 ENSMUSG00000020079 ENSMUST00000020273 1 1 1 80 10 61900232 61900252 ATTTATGTGGAGAGTCTGCTG 59 61898565 61900192 ACTTCTGAACCTCTACTTCCT 59 NA Mus musculus 50 Dnajb12 ENSMUSG00000020109 ENSMUST00000020309 1 1 1 83 10 59353722 59355426 AAGCTTTCAAAGCCATTGG 59 59355473 59355491 TGTCATCACCAAACTGGTC 59 NA Mus musculus 50 Rab1 ENSMUSG00000020149 ENSMUST00000020358,ENSMUST00000109601,ENSMUST00000074741 3 3 4 83 11 20115697 20118825 AGGTTTGCAGATGATACGT 58 20118869 20118890 CCCATCTAACTCTATAGTTCGT 58 NA Nonspecific Mus musculus 50 1700058G18Rik ENSMUSG00000020164 ENSMUST00000020371 3 1 1 63 10 115855640 115858023 GCTCTCGAATCAATCATTACTG 59 115858047 115858065 TGGGTTGTTCCTTATTGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cnot2 ENSMUSG00000020166 ENSMUST00000105267,ENSMUST00000064218,ENSMUST00000105266,ENSMUST00000020374 2 4 5 106 10 115964959 115964980 CAAGAAAGAAGTTTGTAGAGGG 58 115954431 115964893 TGCCAGCATATCTTTCTCTG 59 NA Mus musculus 50 Sumo3 ENSMUSG00000020265 ENSMUST00000020501,ENSMUST00000099538 2 2 2 92 10 77076734 77076752 ATGAGGCAGATTCGATTCC 59 77078904 77078922 ATCAATGGTGTCCTCATCC 59 NA DesignNoJunction Mus musculus 50 Smek2 ENSMUSG00000020463 ENSMUST00000102856,ENSMUST00000020755,ENSMUST00000101439,ENSMUST00000101438 3 4 4 99 11 29096278 29097099 TGAAATTGTAATGGGCATGG 58 29097161 29097179 AAATTCTCGGACCATGGAC 59 NA Mus musculus 50 Elac2 ENSMUSG00000020549 ENSMUST00000071891,ENSMUST00000108697,ENSMUST00000101049 1 3 3 80 11 64812111 64812648 CCACGTCAGTATGATTCCT 58 64812692 64812710 AAGCTTATCAGCCTTTCCA 58 NA Mus musculus 50 Sh3yl1 ENSMUSG00000020669 ENSMUST00000110881,ENSMUST00000020997,ENSMUST00000110880 3 3 3 122 12 31626963 31626981 ATTTGAAGAAAGTAGCCCG 57 31627726 31643724 CATTTCTATTACCCTGGGAG 57 NA Mus musculus 50 Ddx5 ENSMUSG00000020719 ENSMUST00000021062 3 1 3 94 11 106646774 106646792 AATATTGTCGAGCTTGTCG 57 106646600 106646716 GATTTCCACACCTCTTTCC 58 NA Mus musculus 50 Gga3 ENSMUSG00000020740 ENSMUST00000019135,ENSMUST00000106508 2 2 2 80 11 115447678 115447696 GGTTTCCATGCTGAATACG 58 115447497 115447635 TTCACTTTCATTGACTTGGG 58 NA Mus musculus 50 Cacnb1 ENSMUSG00000020882 ENSMUST00000103144,ENSMUST00000017552,ENSMUST00000092736,ENSMUST00000107562,ENSMUST00000107561 3 5 5 84 11 97867048 97867067 AAGTCTCAATCCAAACACCT 59 97866610 97867004 GGATTATGTCAAACATTTCGGG 59 NA Mus musculus 50 Lsm12 ENSMUSG00000020922 ENSMUST00000021297 3 1 1 117 11 102028503 102044183 AATGTTAGTAAGCTTGCCAG 58 102028405 102028423 TGTGAATGGTCTGGAAGAG 58 NA Nonspecific Mus musculus 50 Ap4s1 ENSMUSG00000020955 ENSMUST00000021338 3 1 1 81 12 52821647 52821665 TTTAAACTGATCTACCGGC 57 52821707 52823985 CATAGATAGCCATCTCATTCTC 57 NA Mus musculus 50 Zfp346 ENSMUSG00000021481 ENSMUST00000021937 1 1 1 84 13 55215056 55215077 CAAAGTGAAGAGATACCTAGCA 59 55215122 55216849 GCTGCTCTTCTGATCTGAG 59 NA Mus musculus 50 Clptm1l ENSMUSG00000021610 ENSMUST00000022102 2 1 1 80 13 73752056 73752074 TTTGGAAAGTGAAGAAGGC 58 73752118 73752636 CACTATGGGTACCAAACTG 57 NA Mus musculus 50 Ppwd1 ENSMUSG00000021713 ENSMUST00000022226,ENSMUST00000072775 1 2 2 80 13 105013028 105013180 GTCACCTTGGAGTTATTGAG 57 105012967 105012985 TCATCGCTTTATCATCACC 57 NA Mus musculus 50 Fgf10 ENSMUSG00000021732 ENSMUST00000022246 3 1 1 93 13 119570325 119570345 TAACATCAGTGGAAATCGGAG 59 119570399 119577927 TTTGAGCCATAGAGTTTCCC 59 NA DesignNoJunction Mus musculus 50 Comtd1 ENSMUSG00000021773 ENSMUST00000022295 1 1 1 85 14 22667490 22667508 CATGATGACCTGTGAACAG 58 22667334 22667441 TGAAAGTACCCAGATCCAG 58 NA Mus musculus 50 Entpd4 ENSMUSG00000022066 ENSMUST00000064831 3 1 2 84 14 69981697 69982386 CTCCATCGACTGAAGTATCAG 59 69982432 69982450 TGTAGGTGACAGGAAAGGA 59 NA Mus musculus 50 Efs ENSMUSG00000022203 ENSMUST00000022813 3 1 1 81 14 55539392 55539412 CTTCTGACTCCATCTACAAGG 59 55539241 55539349 ACATCATAGACCTCTGCCA 59 NA Mus musculus 50 2610015P09Rik ENSMUSG00000022701 ENSMUST00000023385 2 1 1 80 16 43960207 43960225 TTACTACTGTCAGGGAGCT 59 43960268 43963391 TGAGAATCTTCCTGTCACAG 59 NA Mus musculus 50 Gbe1 ENSMUSG00000022707 ENSMUST00000023393 2 1 2 180 16 70314540 70361123 GGTATAAGAAGTTTAGCCAGGT 59 70361263 70401988 TTCCAACCACTGAATTCTCC 59 NA Mus musculus 50 Prr13 ENSMUSG00000023048 ENSMUST00000023810 1 1 1 176 15 102290563 102290804 GGAATCCTAATGCTGGACC 59 102290943 102290962 GTTGTGGTACAGGATAAGGG 59 NA Mus musculus 50 Tarbp2 ENSMUSG00000023051 ENSMUST00000023813,ENSMUST00000100168 1 2 2 90 15 102353474 102353627 GGATATTGAGGAACTGAGCC 59 102353680 102353698 GGTTGCAGAACCATAACAC 59 NA Nonspecific Mus musculus 50 Slc5a7 ENSMUSG00000023945 ENSMUST00000095712,ENSMUST00000071756 2 2 2 83 17 54423621 54426688 ATAGGACTGTGGATCAGTG 58 54423556 54423574 GTATTTAGCATGCACAGCT 58 NA Mus musculus 50 Crip3 ENSMUSG00000023968 ENSMUST00000113465 1 1 2 95 17 46568158 46568176 TATGGATACCTGTTTGGCC 59 46568235 46568339 CAATGTTCACACCACAAGG 59 NA InUTR Mus musculus 50 Tmprss8 ENSMUSG00000024124 ENSMUST00000024936 2 1 1 105 17 24110621 24110639 CTCAGTTCACTCCTGTCTG 59 24110156 24110552 CTTGCCATGTCTCTTTCCT 59 NA Mus musculus 50 Ltb ENSMUSG00000024399 ENSMUST00000025262 2 1 1 177 17 35332261 35332279 GGAACCAGAAACTGACCTC 59 35332758 35332776 GTAGAGGTAATAGACGCCG 59 NA DesignNoJunction Mus musculus 50 2610110G12Rik ENSMUSG00000024426 ENSMUST00000061052,ENSMUST00000077494,ENSMUST00000025296,ENSMUST00000056034,ENSMUST00000051462 2 5 5 80 17 36045600 36045806 ATGTTACAGAAAGAGCGAG 57 36045538 36045557 CTTATTCAGGAACTTGAGCA 57 NA Mus musculus 50 Cabyr ENSMUSG00000024430 ENSMUST00000080415,ENSMUST00000115857 2 2 2 80 18 12903108 12903127 CCAATCCAACAAACATCACC 59 12903168 12903279 CTAGAGACGAATTCCCTTCTC 59 NA Mus musculus 50 2310002L13Rik ENSMUSG00000024512 ENSMUST00000025390 1 1 1 118 18 70401725 70403984 AGCAGTTATTAAGGAGTCCT 57 70400937 70400955 TACTTTCCAGAGGGAACAC 58 NA DesignNoJunction Mus musculus 50 Mbd2 ENSMUSG00000024513 ENSMUST00000114946,ENSMUST00000065466 2 2 3 191 18 70728613 70740316 CTACTTCAGTCCAAGTGGT 58 70742075 70742093 GTCTGCTTCTTAATGAGCC 58 NA DesignNoJunction Mus musculus 50 Spire1 ENSMUSG00000024533 ENSMUST00000045105,ENSMUST00000082243,ENSMUST00000115050,ENSMUST00000091867 2 4 4 91 18 67705332 67705351 ATTATCAGGCAGTATGTCGG 59 67690130 67705279 CTTAAGGTTCTCCTTTGCAC 58 NA Mus musculus 50 Asrgl1 ENSMUSG00000024654 ENSMUST00000049948 1 1 1 101 19 9187692 9188686 CATGTAGAGCAAGGAAAGAC 58 9187610 9187628 TTTGTTGACCAAGATGAGG 57 NA Nonspecific Mus musculus 50 Tmem132a ENSMUSG00000024736 ENSMUST00000025645 1 1 1 81 19 10938585 10939754 TACTCTGCGGATTAAGGTG 58 10938522 10938540 TAACTTAGCAGTCCAGAGG 57 NA Mus musculus 50 Tmem2 ENSMUSG00000024754 ENSMUST00000096194,ENSMUST00000025663 3 2 2 80 19 21867463 21871827 TCCAGATGAGAATTGTCCA 57 21871871 21871889 ATAACAATGTGCTTCGCAG 58 NA Mus musculus 50 AI747699 ENSMUSG00000024766 ENSMUST00000025694,ENSMUST00000058385,ENSMUST00000112508 2 3 3 86 19 33632802 33632822 GCCTTGATGTGTATGTAAAGC 59 33631650 33632757 GTATACCACTTCTTCCTACCTG 59 NA Mus musculus 50 Trpd52l3 ENSMUSG00000024815 ENSMUST00000025727 3 1 1 60 19 30078973 30078992 GGATATGAAACTGTTGCAGG 58 30079015 30079033 GTTACTCTGGCTTCAGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem134 ENSMUSG00000024845 ENSMUST00000071372,ENSMUST00000064575 1 2 2 92 19 4131270 4131367 TTAGTCCCAGGAGTCTACC 59 4131423 4131441 CTTCTCAAAGTAGGGCAGG 59 NA Mus musculus 50 Bbs4 ENSMUSG00000025235 ENSMUST00000026265 2 1 1 80 9 59188945 59188963 AACTCTTTCAGACATGTGC 57 59187680 59188903 CCAGAAGAAACAAAGATCTGG 58 NA Mus musculus 50 Bloc1s1 ENSMUSG00000025349 ENSMUST00000026405 2 1 1 92 10 128357155 128357624 GGCACTTAAGGAAATTGGG 58 128357081 128357099 TTGTAGACGTATTCCAGCG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Nab2 ENSMUSG00000025402 ENSMUST00000026469,ENSMUST00000099157,ENSMUST00000105248,ENSMUST00000099156 1 4 4 60 10 127102068 127102086 GGGAGGAGATGATGTACAG 58 127102026 127102044 CATGATTTCCAGGAACTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Myo3a ENSMUSG00000025716 ENSMUST00000044749 2 1 1 80 2 22457770 22473575 AGAGTAATGAGAGGTGTTGG 58 22473618 22473636 TGTAGTCATAAGGGTTGGC 58 NA Mus musculus 50 Taf3 ENSMUSG00000025782 ENSMUST00000114907 1 1 4 60 2 9839875 9839894 TTCTTACCTGCTTCTTTCCC 59 9839834 9839852 GATCTGGTGGTAAAGTGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tspan17 ENSMUSG00000025875 ENSMUST00000026993,ENSMUST00000099503 2 2 2 80 13 54897377 54897395 TGAGAAGTGGCTACAAGAC 58 54897439 54897531 CAGAGGCCAAATATCTGGA 58 NA Mus musculus 50 B3gat2 ENSMUSG00000026156 ENSMUST00000063663 2 1 1 91 1 23851848 23851945 TAACTGCACCAAGGTTCTC 59 23852000 23852018 CAATGTTCACTGTGTCCAG 58 NA Mus musculus 50 Sept2 ENSMUSG00000026276 ENSMUST00000027495 1 1 1 122 1 95398204 95398222 TTTCTGAAGCTGAGAACGA 58 95400090 95402133 ATTCTCTACTTTCCTGCCG 59 NA Mus musculus 50 Rab17 ENSMUSG00000026304 ENSMUST00000027529 2 1 1 87 1 92857746 92857764 AGAAGTACCAAAGCGTCTG 59 92856694 92857695 TGAAAGGAATCCTTCCGAG 58 NA Mus musculus 50 Hdac4 ENSMUSG00000026313 ENSMUST00000008995 2 1 1 80 1 93861398 93864927 AAGAAACTTCTAGGCTCGC 59 93858117 93858135 CCATATGGTGTCGCTATCC 59 NA Mus musculus 50 Avpr1b ENSMUSG00000026432 ENSMUST00000027690 1 1 1 82 1 133497247 133506004 AGATTCTACCAATGTGGCT 58 133506050 133506068 AGCCCATATAGATCCAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nucks1 ENSMUSG00000026434 ENSMUST00000062264 3 1 1 102 1 133824704 133824722 AAGCAGCTTCTAAGCAGAG 59 133824788 133826202 CTGCCAGAATCTTTCTCCT 58 NA Mus musculus 50 Nphs2 ENSMUSG00000026602 ENSMUST00000027896 3 1 1 121 1 158243199 158246950 TCTGCATAAAGGTTGTGCA 59 158248838 158248856 GTGATAGGTGTCCAGACAG 59 NA Mus musculus 50 Stxbp1 ENSMUSG00000026797 ENSMUST00000050000,ENSMUST00000077458 1 2 2 81 2 32677401 32677419 GTTAAGCATGAGGATGCTG 58 32675414 32677359 GTTGATATCCTCCACAATTGTG 59 NA Mus musculus 50 Zeb2 ENSMUSG00000026872 ENSMUST00000068415,ENSMUST00000076836,ENSMUST00000028229 3 3 3 86 2 44857179 44857197 CCTCTTTGTAGCTACACGT 59 44854504 44857129 CATTTGGTGCTGATCTGTC 58 NA Mus musculus 50 Smtnl1 ENSMUSG00000027077 ENSMUST00000028471,ENSMUST00000056870 1 2 2 150 2 84656042 84656060 ATCATGGACAAATTTGGCG 59 84655584 84655766 TTTGGATATCCACGTGCTC 59 NA Mus musculus 50 Lrp4 ENSMUSG00000027253 ENSMUST00000111341,ENSMUST00000028689 1 2 2 80 2 91326055 91326074 TGTATTGGACAGATGTCAGC 59 91326117 91326260 TGGTATCCACTACCACCTC 59 NA Mus musculus 50 Ltk ENSMUSG00000027297 ENSMUST00000028759,ENSMUST00000082130 3 2 2 92 2 119578490 119578508 TAACTGTCTGCTTAGCTGC 59 119578320 119578434 CGATAATAACTGGCCTGGT 59 NA Mus musculus 50 Ppp1r14d ENSMUSG00000027317 ENSMUST00000110820 2 1 2 81 2 119044580 119053507 AACCCACTTTACAAGGGTC 59 119044517 119044537 GATCTTCTGTTGACAAGTCCA 59 NA Mus musculus 50 Stard7 ENSMUSG00000027367 ENSMUST00000069099,ENSMUST00000110375,ENSMUST00000028845 1 3 4 80 2 127117979 127121231 TTGATGAGAATGGCTTTGAC 58 127121274 127121292 TCCAACTGACACAGTATCG 59 NA Mus musculus 50 Bcl2l11 ENSMUSG00000027381 ENSMUST00000110341,ENSMUST00000019281,ENSMUST00000103211,ENSMUST00000103210,ENSMUST00000050696 2 5 6 105 2 127972841 127972859 GAGGAACCTGAAGATCTGC 59 127972927 127983982 AATCATTTGCAAACACCCTC 59 NA Mus musculus 50 8030411F24Rik ENSMUSG00000027444 ENSMUST00000028933 1 1 1 87 2 148609169 148609187 TTGCTACAAGGCTCAAGAG 59 148611525 148611543 TAGTCAGGATGGTGAAGTG 58 NA DesignNoJunction Mus musculus 50 Mapre1 ENSMUSG00000027479 ENSMUST00000028981 1 1 1 63 2 153590822 153592614 TTTATGCCACAGATGAAGG 57 153592641 153592659 TCTTCTTGTTCCTCCTGTG 58 NA DesignRelaxed Mus musculus 50 Tm4sf1 ENSMUSG00000027800 ENSMUST00000029376 2 1 1 81 3 57096981 57096999 TTGGGATGGATGAAGAGGA 59 57096831 57096938 AGTACAGAAGAAAGCATCGAG 59 NA Mus musculus 50 Neurog2 ENSMUSG00000027967 ENSMUST00000029587 2 1 1 119 3 127337321 127337339 ATACAGCTGCACTTTATCG 57 127337422 127337440 CTCTAGATACAGTCCCTGG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Alpk1 ENSMUSG00000028028 ENSMUST00000029662 3 1 1 82 3 127389224 127389243 ATGAGAGTGACAAAGTCCTG 59 127388219 127389179 TTCATACCACATGCCTAGC 59 NA Mus musculus 50 Gpatch4 ENSMUSG00000028069 ENSMUST00000029707,ENSMUST00000050223 3 2 2 83 3 87856026 87858295 CAGAAGTTTGTGAAGACAGC 59 87858341 87858359 GTTGTCAACATCACTGCAG 59 NA Mus musculus 50 Sh3d19 ENSMUSG00000028082 ENSMUST00000029723 1 1 2 80 3 85902175 85902194 AAACCCAGTAAGTGATACCG 59 85906867 85908016 CCATGTACAGGTCTTGGTG 59 NA Mus musculus 50 Manba ENSMUSG00000028164 ENSMUST00000029814 1 1 1 80 3 135187524 135187542 AGACTGGGTACAACATGAC 58 135187585 135205288 TCCTGAAATAAACCTTGGCT 59 NA Mus musculus 50 Ccne2 ENSMUSG00000028212 ENSMUST00000108324,ENSMUST00000029866 1 2 2 80 4 11122241 11122259 AAGTTCTGCATTCTGACCT 58 11122300 11124318 GAGTGTATACTTCACAAACCTC 58 NA Mus musculus 50 Col15a1 ENSMUSG00000028339 ENSMUST00000052526,ENSMUST00000102917,ENSMUST00000082303 3 3 6 252 4 47258528 47258546 CTCTACTACACGGAACCAG 58 47258761 47260357 GTATGGAACCCGTAAATCTC 57 NA DesignRelaxed Mus musculus 50 Mpdz ENSMUSG00000028402 ENSMUST00000070461 3 1 4 166 4 80925672 80927621 AAACAGTGTTTGCAAAGGG 59 80925523 80925544 CACTTCAAGAGAAACCATGAG 58 NA Mus musculus 50 Fgr ENSMUSG00000028874 ENSMUST00000030693 1 1 1 80 4 132550919 132550937 GGCTACTACATCACCACAC 59 132550980 132553052 CAGACCATCATTCACTTCCA 59 NA Mus musculus 50 Casz1 ENSMUSG00000028977 ENSMUST00000060495,ENSMUST00000094464 1 2 2 80 4 148311168 148311186 ACTGCAGTGTCTACTACCA 59 148311230 148312265 CCTTGTTACATCCCACCTG 59 NA Nonspecific Mus musculus 50 Masp2 ENSMUSG00000028979 ENSMUST00000105702,ENSMUST00000103219,ENSMUST00000052060,ENSMUST00000105701 3 4 4 91 4 147977203 147977222 CTAAAGGTCACCTTCCACTC 59 147977276 147977811 CTGCATTCATCCACATCCT 59 NA Mus musculus 50 Rint1 ENSMUSG00000028999 ENSMUST00000115113,ENSMUST00000030852 2 2 2 80 5 23322673 23322694 TCTCGCTATTCAGAATCTTCTG 59 23322732 23322868 GGTTAGCAAGGATTATTTCCTG 59 NA Mus musculus 50 Mfn2 ENSMUSG00000029020 ENSMUST00000105716,ENSMUST00000030884,ENSMUST00000105715,ENSMUST00000105714 3 4 4 96 4 147257084 147257336 TTATAAGAACGAGCTGCAC 57 147257006 147257024 CATAGTCTGCAGTGAACTG 57 NA Mus musculus 50 Tprgl ENSMUSG00000029030 ENSMUST00000030896,ENSMUST00000105639 2 2 2 113 4 153533460 153533479 TTCATCAACAGATGGAACCC 59 153532663 153533384 GAAGCTTTCCAAATGGCAC 59 NA Mus musculus 50 Prkcz ENSMUSG00000029053 ENSMUST00000030922,ENSMUST00000103178 1 2 3 236 4 154663918 154664619 ATTCTGAGGACCTTAAGCC 58 154660947 154660965 GCTCAAACACATGTTTCTC 57 NA DesignRelaxed Mus musculus 50 Slc34a2 ENSMUSG00000029188 ENSMUST00000094787 1 1 1 81 5 53456840 53458810 GGAGAACATTGCTAAATGTCAG 59 53458851 53458870 GACAGTAAGCAAGATGATGC 58 NA Mus musculus 50 Chrna9 ENSMUSG00000029205 ENSMUST00000031108 2 1 1 101 5 66359155 66360361 ATAAAGGACATGGACGAGAG 58 66360425 66360443 GTCATACTGGTCTCGATCC 58 NA Mus musculus 50 Pdcl2 ENSMUSG00000029235 ENSMUST00000031145 2 1 1 92 5 76741612 76746833 GCTAGAAGAACTTGAATGGA 57 76741539 76741557 ACCATCATATCTGCAATGC 57 NA Mus musculus 50 Tfip11 ENSMUSG00000029345 ENSMUST00000031288 3 1 1 99 5 112760954 112760973 TCTTACAAGACTGTGGAGGA 59 112761035 112761996 TCATGTCGATCACCTTGAC 59 NA Mus musculus 50 P2rx4 ENSMUSG00000029470 ENSMUST00000031429,ENSMUST00000077457,ENSMUST00000081554 1 3 3 80 5 123168331 123168349 TCCCTCTTCATCATGACCA 59 123168391 123168527 GCTGGTCTTATCAGGAATCTC 59 NA Mus musculus 50 Pxmp2 ENSMUSG00000029499 ENSMUST00000031472 1 1 1 60 5 110710367 110712672 GTTTATGGGTTGTTTGTCAC 57 110710326 110710347 AGTATTCCATGAAGAGGTAGAG 58 NA DesignRelaxed Mus musculus 50 Actb ENSMUSG00000029580 ENSMUST00000031564,ENSMUST00000100497 1 2 2 80 5 143665916 143666030 CTTCTTGGGTATGGAATCCT 58 143665855 143665873 TCTTTACGGATGTCAACGT 58 NA Nonspecific Mus musculus 50 Slc13a1 ENSMUSG00000029700 ENSMUST00000031713,ENSMUST00000115350 1 2 2 83 6 24058256 24067935 CATTTCAATACGCGCTACC 59 24058191 24058209 AAGAATTAGAGCAACCGGG 59 NA Mus musculus 50 Dync1i1 ENSMUSG00000029757 ENSMUST00000115556,ENSMUST00000115559,ENSMUST00000031771,ENSMUST00000115558,ENSMUST00000115554 2 5 5 60 6 5750842 5750860 TCCTACTCCAAGGAGACAC 59 5750883 5855116 CTTCCTCATCCTCTTCAGAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Vmn2r26 ENSMUSG00000030141 ENSMUST00000032238 3 1 1 186 6 124000695 124000714 GAGAACACTGTGAACAAGGA 59 124000863 124003886 ATAAAGGAGTCTGACTGCG 59 NA Mus musculus 50 Gabarapl1 ENSMUSG00000030161 ENSMUST00000032264 1 1 1 123 6 129483526 129483545 TTAGGAAGAAATACCCGGAC 58 129487585 129488603 AAGTAGAACTGGCCAACAG 59 NA Mus musculus 50 Tmtc1 ENSMUSG00000030306 ENSMUST00000060095,ENSMUST00000100772 2 2 2 80 6 148198057 148198076 GGAATAAAGAACTGTCCGGA 59 148196047 148198014 CTTCTCAGGAAAGCCAGAG 59 NA Mus musculus 50 Pop4 ENSMUSG00000030423 ENSMUST00000032585 2 1 1 85 7 39049444 39050934 GGTGCTATTATTTCAGTCACG 59 39049379 39049397 AAGACATGTTTGGTCTCCT 58 NA Mus musculus 50 Idh2 ENSMUSG00000030541 ENSMUST00000107384 2 1 1 68 7 87242838 87243036 GGAGATCTTTGACAAGCAC 58 87242788 87242806 ATGAGCCGATGTTCATACC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Rab6 ENSMUSG00000030704 ENSMUST00000032946,ENSMUST00000098252 3 2 2 102 7 107756774 107756792 AAATTCAAGCTGGTGTTCC 58 107775116 107776927 CAATTGTTGCCTGATAGGT 57 NA Mus musculus 50 Ate1 ENSMUSG00000030850 ENSMUST00000094017,ENSMUST00000033139,ENSMUST00000035458 3 3 3 102 7 137562069 137607654 GAGATACAAGGGTCAATATAGACC 59 137561990 137562009 GTACTTGGAGTTGTCCAGAG 59 NA Mus musculus 50 Xlr4c ENSMUSG00000031362 ENSMUST00000088451,ENSMUST00000114531,ENSMUST00000114530,ENSMUST00000068551 3 4 5 169 X 70486712 70487414 TAACCCAGGAAACAATCTGG 59 70484972 70484990 AGTGGTCAACATTCCACTC 59 NA Nonspecific Mus musculus 50 Kcnu1 ENSMUSG00000031576 ENSMUST00000098858 1 1 1 80 8 27008317 27010212 CTTTCACAGTTGTTGCACTC 59 27010254 27010273 GCAATGAAGAACCCTAAGGT 59 NA Mus musculus 50 Herpud1 ENSMUSG00000031770 ENSMUST00000034220 3 1 1 82 8 96915744 96916082 TACATGCAATACTTAGCTGC 58 96916126 96916145 GTAGAGACCACAGGTATCTC 58 NA Mus musculus 50 Ciapin1 ENSMUSG00000031781 ENSMUST00000034233 2 1 1 81 8 97356462 97356480 GACTGCAAGAGTTAACTGG 58 97355810 97356418 GATTCCTTATGCGAAGACTG 58 NA Mus musculus 50 Necab2 ENSMUSG00000031837 ENSMUST00000098363 2 1 1 84 8 121978283 121978301 ACTATGAAGATGTCCTGGC 58 121978347 121986471 CCTTCATACACCTTCTTAGTG 57 NA Mus musculus 50 1700054N08Rik ENSMUSG00000031971 ENSMUST00000034452 3 1 1 99 8 126369149 126369167 GTTTGCTCTTTATGGCTGG 59 126366407 126369087 TGATTCATGAATCTCGTGCA 59 NA Mus musculus 50 Slc25a38 ENSMUSG00000032519 ENSMUST00000035106 2 1 1 81 9 120026648 120029385 TGTCTCCTTCCATTGTGAG 58 120029430 120029448 CGCAAGAAATACTGCTTCG 59 NA Mus musculus 50 Armet ENSMUSG00000032575 ENSMUST00000069036 1 1 1 102 9 106792630 106793416 AAAGAGAATCGGTTGTGCT 59 106792546 106792564 TTTCCACAGGGATATGGTG 58 NA Mus musculus 50 2410131K14Rik ENSMUSG00000032840 ENSMUST00000049138 2 1 1 73 5 118709475 118709493 CTAAATGCAGGACCTCCTC 59 118711140 118711159 ATAGCAGTACTTGGCTATGG 58 NA DesignNoJunction Mus musculus 50 Atp1a1 ENSMUSG00000033161 ENSMUST00000036493 3 1 1 80 3 101387794 101388654 GGGATTAAGGTCATCATGGT 59 101387733 101387752 TTCTGAGATAATGCCTACCC 58 NA Mus musculus 50 Mgll ENSMUSG00000033174 ENSMUST00000113582 2 1 4 155 6 88759431 88768576 GACTTTGAAGGTCCTTGCT 59 88773357 88773375 GATGATTCCATGAGCAGGT 59 NA Mus musculus 50 Mgll ENSMUSG00000033174 ENSMUST00000113580 1 1 4 92 6 88714646 88714664 TGGCTCATATGTTGAAGGG 59 88716249 88716267 ATATAACCAGGGCTGACTG 58 NA DesignNoJunction Mus musculus 50 Prickle4 ENSMUSG00000033475 ENSMUST00000113301 1 1 2 124 17 47824218 47824848 GGAACTTGATCCTCAATTTGG 59 47823989 47824007 AAACACAGGAGAACTGCTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Angptl1 ENSMUSG00000033544 ENSMUST00000027885 3 1 2 82 1 158788748 158790552 AGATACGTACACAGGAAACTG 59 158790596 158790614 CTCCGTTGAGGTTAGAGTG 59 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111698,ENSMUST00000111696,ENSMUST00000111695,ENSMUST00000111694,ENSMUST00000111690,ENSMUST00000111678,ENSMUST00000111677,ENSMUST00000111676,ENSMUST00000099941,ENSMUST00000111693,ENSMUST00000111692,ENSMUST00000111688,ENSMUST00000111687,ENSMUST0 2 22 23 62 2 84449225 84449698 CAACAAATCAGGGAATCGT 58 84449181 84449199 ATTGTCTGCAGGACAAGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Myo5a ENSMUSG00000034593 ENSMUST00000113484,ENSMUST00000036772 3 2 2 125 9 75043998 75045459 AAGGATGATTGATCTGATGG 57 75049082 75049100 GATATGTTCTCCATCTGCC 57 NA Mus musculus 50 Filip1 ENSMUSG00000034898 ENSMUST00000093811 1 1 1 146 9 79665824 79665842 GAGAAGGAGGTTTCTACGG 59 79663696 79665714 TTGTCCTGACACTGATTGG 59 NA Mus musculus 50 Tjp3 ENSMUSG00000034917 ENSMUST00000092280,ENSMUST00000045744 3 2 2 89 10 80743211 80743229 CTGGTGCTAAGAGACAGTG 59 80742926 80743161 GTCTGAGATGTCTTCCATTAGG 59 NA Mus musculus 50 Spcs2 ENSMUSG00000035227 ENSMUST00000036274 1 1 1 105 7 106993277 106993295 AAGAGCATCTTCCTTGTGG 59 106988374 106993210 GGGTGTATTTGTCATCAAACC 59 NA DesignNoJunction Mus musculus 50 Brsk1 ENSMUSG00000035390 ENSMUST00000048248 2 1 1 85 7 4662038 4662057 TTCAAACGTGTGGTAGAGAC 59 4662105 4666944 TTCTTCTCATCTGCCAAGG 59 NA Mus musculus 50 L3mbtl ENSMUSG00000035576 ENSMUST00000035751,ENSMUST00000109436 3 2 2 90 2 162786810 162787148 TTCCCAAAGGTTACAAGGA 58 162787202 162787220 CTTACAAACAGGTGCTTGG 58 NA Mus musculus 50 Zhx3 ENSMUSG00000035877 ENSMUST00000103112,ENSMUST00000103111,ENSMUST00000109460,ENSMUST00000041220 3 4 4 94 2 160658099 160658117 TAAAGATGCCACAGGACTG 59 160608106 160658042 TTCCTTAAGCTTCTTGTCCT 58 NA InUTR Mus musculus 50 C630028N24Rik ENSMUSG00000035878 ENSMUST00000039742 1 1 1 80 9 54768617 54770007 CTCTCATATCCATTGACAGTG 57 54770049 54770067 CTATTGGTCTTCCTGGGAG 58 NA Mus musculus 50 Zdhhc23 ENSMUSG00000036304 ENSMUST00000036321 1 1 1 80 16 43969517 43971520 TAATTACAGCTCAGCCCTG 59 43969455 43969473 ATGAGGAAGATGTAGGCCA 59 NA Mus musculus 50 1810006K21Rik ENSMUSG00000036372 ENSMUST00000040372 1 1 1 92 19 10281016 10281665 TTCTTCGTTTACGAGGTCAC 59 10281720 10281738 AAAGCCCATGAAGAGTGAG 59 NA Mus musculus 50 A930025D01Rik ENSMUSG00000037773 ENSMUST00000073989 3 1 3 99 2 130247681 130247699 CCTCTCGCACTTACTTCTG 59 130245044 130245062 CACAAAGTTCATTCCAGGG 58 NA DesignNoJunction Mus musculus 50 2810451A06Rik ENSMUSG00000038009 ENSMUST00000061295 2 1 1 60 15 98932180 98932198 GATGAGAAACTTCAGCTGG 58 98934760 98934780 CTTCATTAGTTGCTCCTTCTG 58 NA DesignNoJunction Mus musculus 50 Kcna6 ENSMUSG00000038077 ENSMUST00000040751,ENSMUST00000112242 3 2 2 60 6 126689235 126689253 TTCCTATGCATTTCCTGGT 58 126689193 126689211 TGAAGATGTTCCTCCAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 1700018A04Rik ENSMUSG00000038408 ENSMUST00000042083 3 1 1 124 13 31672013 31678336 CACCTTAAGAGGTTCTACCTG 59 31671909 31671927 CTGTTTGAATTGCCTGCTG 59 NA InUTR Mus musculus 50 Egr1 ENSMUSG00000038418 ENSMUST00000064795 1 1 1 60 18 35022681 35022700 ATCCACTATTAAAGCCTTCG 57 35022720 35022741 GGTATTAAGAGCCTTTAAGTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Abcf1 ENSMUSG00000038762 ENSMUST00000043757,ENSMUST00000087205 3 2 2 183 17 36096928 36097069 TGGCTCAATAACTACCTTCAG 59 36096618 36096636 GCTTTAGCAGCTCTTTCTG 58 NA Mus musculus 50 Runx2 ENSMUSG00000039153 ENSMUST00000113576,ENSMUST00000113572,ENSMUST00000113571,ENSMUST00000077846,ENSMUST00000113568 1 5 5 117 17 44861777 44861795 ATGATGAGAACTACTCCGC 58 44854230 44861696 AAGGTGAAACTCTTGCCTC 59 NA Mus musculus 50 Pomt1 ENSMUSG00000039254 ENSMUST00000036473 2 1 1 81 2 32099220 32099759 GACCTTGTCAAATATGCGC 59 32099803 32099822 TAAGTACAGGAAGACTGGGA 59 NA Mus musculus 50 BC017643 ENSMUSG00000039294 ENSMUST00000106115,ENSMUST00000038709 1 2 2 80 11 121088148 121088570 CTATTACAGTGGAGATAGTCTGG 59 121088090 121088109 TCTTCCAAGTTCTGTACAGC 59 NA Mus musculus 50 Cntn5 ENSMUSG00000039488 ENSMUST00000074133 3 1 1 80 9 9673971 9693501 GGGTTTGAGATTAGTTACTGGA 59 9673912 9673931 GAATGACTCATTCCCTCTGG 59 NA Mus musculus 50 Fgl2 ENSMUSG00000039899 ENSMUST00000035799 2 1 1 81 5 20879058 20879076 TTGTGGTCAACAGTTTGGA 59 20879121 20881084 ATTAGATGTTGAACCGGCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Bat2d ENSMUSG00000040225 ENSMUST00000028016,ENSMUST00000046646,ENSMUST00000046632 2 3 3 84 1 164622919 164622940 CAACTGATAAAGTTCCTGAACC 59 164622745 164622874 AAGTCTGGAAGCTTCTGAG 58 NA Mus musculus 50 Txndc3 ENSMUSG00000041138 ENSMUST00000039340 2 1 2 183 13 19749920 19750642 CCACAGAGTTTATGTGTACAG 58 19737088 19737107 ATTACCTCCTTGAGCTTCTG 59 NA Mus musculus 50 Ak7 ENSMUSG00000041323 ENSMUST00000040876 2 1 1 80 12 107004948 107006746 CCCGATACATATCGATGTAGG 59 107006787 107006806 TTCCCGATCTCTTTGATGAG 59 NA Mus musculus 50 2210010L05Rik ENSMUSG00000041439 ENSMUST00000087702,ENSMUST00000087701 2 2 2 168 1 52720284 52733333 AAGTTCTTCAAGGTGTCAC 57 52720134 52720152 TAATTGACTAACACGCCTC 57 NA Mus musculus 50 Myrip ENSMUSG00000041794 ENSMUST00000048121 3 1 1 80 9 120373851 120373869 GCTGGCTTAAACATAGCAC 59 120373911 120374033 GTCTATAGTTTGTACCTGGCT 58 NA Mus musculus 50 Foxo4 ENSMUSG00000042903 ENSMUST00000062000,ENSMUST00000113703 3 2 3 132 X 98454558 98454857 TCAACTTTGAGCCAGATCC 59 98454952 98454971 TAAAGTAGGGTCCCAAACTC 58 NA InUTR Mus musculus 50 Tmem186 ENSMUSG00000043140 ENSMUST00000052505 1 1 1 62 16 8636000 8636018 CGTGTCAGACATGATACCC 59 8635956 8635974 ATGCGTACAAACACATCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 5530400B01Rik ENSMUSG00000043186 ENSMUST00000051217 3 1 1 170 7 149266139 149266157 AAGTCCTGTCCTAGTTCTC 57 149265987 149266005 ATCCAATGACAGACAGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr146 ENSMUSG00000044197 ENSMUST00000051293,ENSMUST00000100514 1 2 2 60 5 139869278 139869297 TACCGTTACATCAACAAAGC 58 139869320 139869338 AGTGCATCTTCTTCATCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 NM_207149.2 ENSMUSG00000044228 ENSMUST00000054304 3 1 1 60 2 85594141 85594159 CTAATGTCATCACTCCCAC 57 85594182 85594201 ATGGCTACAATGATGAAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 9630041N07Rik ENSMUSG00000044296 ENSMUST00000109134,ENSMUST00000049625,ENSMUST00000109133 2 3 3 75 11 50651451 50651469 GAACAAGCAGAAGACTTCC 58 50647456 50651412 CAAACAAGCTCTTCCATCC 58 NA DesignNoJunction Mus musculus 50 Dsc1 ENSMUSG00000044322 ENSMUST00000025187,ENSMUST00000038710 2 2 2 80 18 20253150 20253287 AGGCTTAAGGTATGAGATGG 58 20253089 20253108 TTCACAGTTCTCAAGTCTCC 59 NA Mus musculus 50 P2ry4 ENSMUSG00000044359 ENSMUST00000053373 2 1 1 175 X 97789950 97790060 TAAGATGGTGCTCCTTACC 58 97789603 97789621 GAATAGCAAGGAGTCTGCA 59 NA DesignNoJunction, InUTR Mus musculus 50 4632419K20Rik ENSMUSG00000044465 ENSMUST00000048079,ENSMUST00000074686 3 2 2 80 7 112533904 112533922 TCTGAGTCTCTTCAGGACC 59 112533651 112533861 CATGGGACAAGATACCTGAG 59 NA Mus musculus 50 Pamci ENSMUSG00000044921 ENSMUST00000055355 2 1 1 73 10 101975218 102007460 GATCTCCAACTAAAGACATGGA 59 102007494 102007512 GACAATCTTCTCGTCCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nudt18 ENSMUSG00000045211 ENSMUST00000089049 2 1 1 166 14 70978787 70978805 AATGGAACCAGGAGAAACC 59 70979143 70979161 TGGAAGTCTTGAGAACTCC 58 NA DesignNoJunction Mus musculus 50 Zfp574 ENSMUSG00000045252 ENSMUST00000053410 2 1 1 62 7 25864594 25864612 GACGGTCCTGTACATTGAG 59 25864638 25864656 AAGGATCCATAGAGCTGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Smtnl2 ENSMUSG00000045667 ENSMUST00000108500,ENSMUST00000050226,ENSMUST00000054338 3 3 3 174 11 72217441 72217460 CAAATTCATGCATCTTGGAG 57 72216618 72216636 CAGAGAATTTCTCGGAGAC 57 NA DesignNoJunction, InUTR Mus musculus 50 Tapt1 ENSMUSG00000046985 ENSMUST00000055128 3 1 1 80 5 44574004 44575829 AGCTGTCTTACTCATCAGAG 58 44573943 44573962 TAGAAGAGTATGACACAGGC 58 NA Mus musculus 50 BC029214 ENSMUSG00000047617 ENSMUST00000054186 1 1 2 118 2 25315772 25315790 CTTTGACCTCTCCAAGGTG 59 25315365 25315690 TCTGGTGATCAAGTTCTGC 59 NA Mus musculus 50 Ggnbp1 ENSMUSG00000048731 ENSMUST00000053683 3 1 1 69 17 27167734 27169515 CAATTGAGTTTGGAGACCTC 58 27169547 27169565 CCAAGGAGATAGTTCCACG 59 NA DesignRelaxed Mus musculus 50 Lingo1 ENSMUSG00000049556 ENSMUST00000053568 1 1 3 151 9 56532928 56532946 CAAGCATTGGACCAATCAC 59 56501595 56501613 CATTTCTCCTTCATGCCAG 58 NA DesignNoJunction, InUTR Mus musculus 50 Zfp646 ENSMUSG00000049739 ENSMUST00000050383 1 1 1 139 7 135027339 135027357 ACCTGTTCTCATTGTCCTC 58 135028984 135029002 GCTGTAGAGGAATCCTCTC 58 NA DesignNoJunction Mus musculus 50 NM_146718.2 ENSMUSG00000050134 ENSMUST00000055873 2 1 1 60 1 175999560 175999581 CTCATCTTCCGTCATACGAC 59 175999603 175999622 ACTGACAAAGTGGTACATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Adra1b ENSMUSG00000050541 ENSMUST00000055899,ENSMUST00000067258 1 2 2 60 11 43648847 43648865 GAAGGAAATGTCCAACTCC 58 43648805 43648826 CTCATGAAAGTTCTTAGAGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Slc29a4 ENSMUSG00000050822 ENSMUST00000058418 3 1 1 103 5 143193699 143193717 GCTCTACTATACCACTCGG 58 143193784 143194422 GAGTTTGGTGCTCAAAGTG 59 NA Mus musculus 50 Tmem125 ENSMUSG00000050854 ENSMUST00000060214 2 1 1 108 4 118215280 118215298 TCTCTGACAGTTTGTCCTG 58 118214961 118215208 CTATGGTTACCCTCACCTC 58 NA InUTR Mus musculus 50 BC027344 ENSMUSG00000050855 ENSMUST00000108223,ENSMUST00000085792 2 2 3 60 7 30635987 30636007 GAACCCAGAAGAGAACTACTC 59 30631966 30635965 AACGTCATCAGTCTTTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 Rhox11 ENSMUSG00000051038 ENSMUST00000054147 3 1 1 78 X 35433601 35433620 TCCTGAATGTGGATGAACAG 59 35429963 35429982 ATTTCCCTCTGAATCTTCCT 58 NA DesignNoJunction Mus musculus 50 Pcdhb9 ENSMUSG00000051242 ENSMUST00000057228 1 1 1 60 18 37561654 37561673 CTTACCATGTGGAAATCGAG 58 37561696 37561714 GTTACAGAGCCTTTCCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 3000004C01Rik ENSMUSG00000051378 ENSMUST00000021311 1 1 1 80 11 102774392 102774771 CCACAAAGCCTTTCTAGCT 59 102774330 102774348 TTCATTCTTTGCATGGCAC 59 NA Mus musculus 50 Usp29 ENSMUSG00000051527 ENSMUST00000108555,ENSMUST00000054055 2 2 2 177 7 6912853 6913853 TACTTCTGATTGTGCATGC 58 6913994 6914012 ACTTGAAAGAAACCACCAG 57 NA InUTR Mus musculus 50 F730043M19Rik ENSMUSG00000052125 ENSMUST00000063828 1 1 2 188 12 33831997 33832015 ACATAACTCCGAGAAACCG 59 33824643 33825831 TGGGTCATAATGGCTATGTC 59 NA InUTR Mus musculus 50 ENSMUSG00000052724 ENSMUSG00000052724 ENSMUST00000064735 3 1 1 178 9 114689406 114689425 TATCACTGTCATCCAAAGCA 59 114690552 114690570 CTTCCTTCCTCTTCTCCAG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 ENSMUSG00000053185 ENSMUSG00000053185 ENSMUST00000065469 2 1 1 77 1 30776597 30776616 GTGGTAGGTATGGTTCTGTG 59 30776539 30776557 ACATGGATGGAAGACACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rpia ENSMUSG00000053604 ENSMUST00000066134 2 1 1 89 6 70733600 70735546 GCGAATAGCTGAAAGAGTG 58 70727380 70727399 CCATACTGCAAGATAAGCTG 58 NA Mus musculus 50 Tll1 ENSMUSG00000053626 ENSMUST00000066166 3 1 1 81 8 66550175 66553029 TCTCCTTGGTAGATTCTGTG 58 66550113 66550131 GCTACGAAACTCAATCCAC 58 NA Mus musculus 50 Tgm5 ENSMUSG00000053675 ENSMUST00000102489,ENSMUST00000028721 2 2 2 80 2 120900886 120900905 CGATTATGGCTTCATCTACC 57 120897339 120900844 ATATTCTCTTCAAACTGCCC 57 NA Mus musculus 50 Msi1 ENSMUSG00000054256 ENSMUST00000067168 1 1 1 80 5 115883894 115885472 CAGCCTAAGATGGTCACTC 59 115885516 115885534 GTGTTTCACATCTTCCACC 58 NA Mus musculus 50 Zscan4c ENSMUSG00000054272 ENSMUST00000067210 1 1 1 80 7 11592213 11592231 CAGTGGTAGCGATATGAGG 59 11592274 11594129 ATTGAAACATGGACCATGAC 58 NA Nonspecific Mus musculus 50 A630033H20Rik ENSMUSG00000054293 ENSMUST00000067249 2 1 1 60 X 104366863 104366882 AGCCAATAACAGTGAATCGT 59 104366903 104366923 TGAAGCCATAGTAATGTCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Smyd1 ENSMUSG00000055027 ENSMUST00000074301,ENSMUST00000068379,ENSMUST00000114188,ENSMUST00000114186,ENSMUST00000068289 3 5 6 129 6 71212185 71212204 TCTGAGATGACAATAGGCAG 58 71212075 71212093 CTGCAGAATAAGCCCTCTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zfp819 ENSMUSG00000055102 ENSMUST00000032661 1 1 2 72 7 50865294 50865312 TTTCTGTCAGAAGCTCCAG 59 50865348 50867370 CTCAAAGGACACCAATCTC 57 NA DesignNoJunction Mus musculus 50 OTTMUSG00000019350 ENSMUSG00000055109 ENSMUST00000112542,ENSMUST00000068500 2 2 2 161 X 152735575 152735593 CTGAGTTTCCTGGTAGCAG 59 152737829 152777616 ACACAAAGAAACCTCAGGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Fut9 ENSMUSG00000055373 ENSMUST00000084770,ENSMUST00000108199 2 2 2 60 4 25547903 25547921 AATCGTCTGCATCATCCTG 59 25547861 25547881 GGTGGGCTTGATATAAATGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ccl25 ENSMUSG00000055951 ENSMUST00000069762 2 1 2 127 8 4327845 4327864 AATCAAGTGGGTTCCATCTG 59 4348563 4348581 TTGTAACCACAACACTGGA 58 NA DesignNoJunction Mus musculus 50 1700001K19Rik ENSMUSG00000056508 ENSMUST00000070659 2 1 1 70 12 111908465 111908483 CAGAAGGAACCTCATGGAC 59 111907135 111907153 CCGAGTCACCATCATAAGG 59 NA DesignNoJunction Mus musculus 50 Anks1b ENSMUSG00000058589 ENSMUST00000099366,ENSMUST00000078569,ENSMUST00000092221,ENSMUST00000099364 3 4 4 82 10 90143585 90143604 ATTACACCAAAGCCTTTCTC 58 90330795 90357846 AACCTGAAATAGCTCAAGC 57 NA Mus musculus 50 Rgs3 ENSMUSG00000059810 ENSMUST00000084521,ENSMUST00000107428,ENSMUST00000107430,ENSMUST00000107420,ENSMUST00000081171,ENSMUST00000107418 1 6 10 83 4 62362161 62362179 AATCACAGTCCAAGATGGC 59 62362226 62363103 CCAGGTTTACCTCTTTGCA 59 NA Nonspecific Mus musculus 50 Layn ENSMUSG00000060594 ENSMUST00000098782 3 1 2 80 9 50882001 50882020 AAACAGAGCAATAACACAGC 59 50876289 50881960 CACATACCAGTTCCTAAACTG 58 NA Mus musculus 50 Cyp2d34 ENSMUSG00000062185 ENSMUST00000035410 3 1 2 90 15 82448037 82448062 GTTCTTAACTCCCAATACTCCT 59 82447968 82447986 AGGTTATCCAGTATGGCCA 59 NA Mus musculus 50 Tas2r109 ENSMUSG00000062528 ENSMUST00000067539 3 1 1 61 6 132930709 132930730 CTAGACTGATGATACAGTTCAC 57 132930669 132930690 CCAGACACTAATATGGTTAGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnj15 ENSMUSG00000062609 ENSMUST00000113854,ENSMUST00000037154 2 2 9 179 16 95480041 95513419 GAAACTTGACTTCCAAAGGC 59 95517243 95517261 TTGGTATGCTTCACCAGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 1810041L15Rik ENSMUSG00000062760 ENSMUST00000080751,ENSMUST00000089026 1 2 2 86 15 84237185 84247539 ACATGCACAACAACTACAC 58 84237117 84237135 AATAGAGCAGATCCAGGAC 58 NA Mus musculus 50 A430107O13Rik ENSMUSG00000062980 ENSMUST00000115383,ENSMUST00000076610 1 2 2 80 6 22183651 22183912 ACATCTCTTGCAAAGATCAC 58 22183955 22183973 GAATTAAGCCACTGGACAC 58 NA Mus musculus 50 Olfr666 ENSMUSG00000063582 ENSMUST00000081116 3 1 1 61 7 112041946 112041964 GCCCATGTACTACTTCCTG 59 112041903 112041921 CTGTGGTTGTACACAAGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr190 ENSMUSG00000064006 ENSMUST00000071243 1 1 1 60 16 59074247 59074266 TGTGTCCTATACACTAGTGC 58 59074206 59074224 CTTCATGCTTTGGACAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 2410003J06Rik ENSMUSG00000064018 ENSMUST00000071597 1 1 1 60 6 60720531 60720549 ATCCTCATGAGAGCTTCTG 58 60720446 60720507 AGACTTCCTTCACATCCAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Olfr134 ENSMUSG00000064153 ENSMUST00000074883 1 1 1 60 17 38312754 38312773 TCCTCTCATCTAATTGTGGT 57 38312793 38312814 GCTGAAGATACATACTAATGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ube2l3 ENSMUSG00000064208 ENSMUST00000077776 2 1 1 76 10 27656647 27656667 GTGATTCCAGTAAGTTTGAGC 59 27656705 27656723 CAATTTCCACAGAGTCCTG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 mt-Nd6 ENSMUSG00000064368 ENSMUST00000082419 1 1 1 60 MT 13702 13720 TGATGGTTTGGGAGATTGG 59 13660 13678 TCCTTCCAACATAACTCCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ubr4 ENSMUSG00000066036 ENSMUST00000097822 2 1 1 80 4 139023185 139023203 ACAATCTGGATGACTACCG 58 139023247 139023936 TGACTTCATTCTCCTCAGG 58 NA Mus musculus 50 Spag8 ENSMUSG00000066196 ENSMUST00000084646,ENSMUST00000107870 3 2 2 86 4 43665229 43665247 CTCCCAAGACACATCTGTC 59 43664905 43664998 CACCTCTTTACAGATCTGGT 58 NA Mus musculus 50 NP_001074893.1 ENSMUSG00000066279 ENSMUST00000084830 2 1 1 118 7 109262884 109263492 CATTGATATGGATGAACGGA 57 109262785 109262803 TTCGAATTGCATCCAAGTC 58 NA Mus musculus 50 Lefty2 ENSMUSG00000066652 ENSMUST00000085797 3 1 1 111 1 182827704 182827723 GTTCCTGACGTATGAATGTG 58 182827797 182827815 CAAGGAGGTCATCTCTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr220 ENSMUSG00000066671 ENSMUST00000085861 2 1 1 60 1 176379553 176379571 TCCTAAGCTCATGTATGCC 58 176379594 176379613 AACAACAGTGTAGAGAACTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Hmcn1 ENSMUSG00000066842 ENSMUST00000097545 1 1 2 76 1 152723610 152839916 CAGAAATTGGTCCAGTGAC 58 152723552 152723571 CACCTGAACATACAGTTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cryba4 ENSMUSG00000066975 ENSMUST00000112385,ENSMUST00000112383,ENSMUST00000086629,ENSMUST00000086631 2 4 4 100 5 112677198 112677216 CCTTCCATGTTCAATCTGG 58 112675760 112675778 CTTGTAGTCACCTGAGTGG 59 NA DesignNoJunction Mus musculus 50 H2-T23 ENSMUSG00000067212 ENSMUST00000102678 3 1 1 162 17 36168851 36169109 AGAGTAACGACGAATCTCAC 59 36168708 36168726 TGTGAGGCTATGTCATTCG 59 NA Mus musculus 50 ENSMUSG00000067584 ENSMUSG00000067584 ENSMUST00000087968 2 1 1 163 11 3549489 3549507 GGAATTGGAACTCAACCAC 58 3549344 3549362 TACTGAACGCTGAATCTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lce3f ENSMUSG00000068885 ENSMUST00000090863 1 1 1 240 3 92796875 92796893 CAAAGAGCACAACACAGTG 59 92797097 92797115 CTTTCCCAATTGCACTGTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 NM_016844.1 ENSMUSG00000069196 ENSMUST00000091506 3 1 1 61 13 73455509 73455527 TAATCTTGAAGCTGGTGGG 59 73455552 73455570 AGTTGCAGATCATTTCGTG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zfp748 ENSMUSG00000069204 ENSMUST00000091522 2 1 2 152 13 67646338 67647561 GGTCTTGCTTTCTCTAAGC 58 67643791 67643809 GAGTGAGTTCCAATCACAG 57 NA DesignNoJunction Mus musculus 50 Nkain2 ENSMUSG00000069670 ENSMUST00000092602 1 1 1 204 10 32610224 32610242 GATACCAACAAAGCAAGGC 59 32610038 32610056 CAACTTCTCAGAGGTCGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr895 ENSMUSG00000070309 ENSMUST00000093864 1 1 1 60 9 38076985 38077003 TACAGCCTCAGAAACAAGG 59 38077027 38077045 ATGTGAGTCTCTTCCAGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr2 ENSMUSG00000070417 ENSMUST00000094109 2 1 1 60 7 114144787 114144805 CTCAACTTGTCATGCACTG 59 114144745 114144763 AAATGGCCAGGATAAAGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001074704.1 ENSMUSG00000070576 ENSMUST00000094463 1 1 1 146 5 111850893 111883643 CAACAAAGAAGCCCATGAC 59 111883753 111883771 ATATCAGAGTGCAGAGACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000071543 ENSMUSG00000071543 ENSMUST00000096043 3 1 1 60 13 12278066 12278086 ATAAGTGGAGGTTCTGTAGAG 58 12278026 12278045 CATTCTTCCTGTGAGTACCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1474 ENSMUSG00000071630 ENSMUST00000096202 3 1 1 60 19 13545857 13545877 CATTATGACAAGTACCACCTG 58 13545898 13545917 TAAGATCCCACAAGTGTAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG667719 ENSMUSG00000072479 ENSMUST00000114518,ENSMUST00000097221 2 2 2 60 X 70403188 70403206 AGAAGGAAATCTCCAAGGT 57 70403229 70403344 GCTATGTCTTGATCTTGGGT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Gm525 ENSMUSG00000072553 ENSMUST00000100619 1 1 1 156 11 88935279 88935297 TGTCTTGGTCTTTGCTCTC 59 88936400 88949884 ATGATGCATATACTCCCGC 59 NA Mus musculus 50 Ott ENSMUSG00000072924 ENSMUST00000101182,ENSMUST00000112753,ENSMUST00000112752 2 3 3 60 X 145904795 145914001 CCAGAAATTGACAGATCGT 57 145914022 145914043 GTTCCTGTACCCATAAATAGTC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000073107 ENSMUSG00000073107 ENSMUST00000101456 3 1 1 60 5 30274105 30274124 CTTCAGTAAGAAGTCCTTCC 57 30274145 30274165 CAGAATAAGATCCTCACAGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Speer4a ENSMUSG00000073119 ENSMUST00000079447 3 1 1 89 5 26362578 26363231 TTCTATCGTAACCTGCACAC 59 26362508 26362526 TATTTCCTTGCTCTCCTGC 59 NA Nonspecific Mus musculus 50 ENSMUSG00000073482 ENSMUSG00000073482 ENSMUST00000097444 2 1 1 116 1 184339040 184339058 CGCAGGAGAACAATAATCG 58 184338942 184338960 GTTCATGGTTCCTAAGGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 4933415F23Rik ENSMUSG00000073730 ENSMUST00000073179 2 1 1 60 1 23108917 23108935 AACCCGGATAAAGATGACC 59 23108875 23108896 ACTTGACGATGATCTTATCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700001D09Rik ENSMUSG00000074344 ENSMUST00000010279 2 1 1 118 3 105719980 105719998 GACAATAGAGAAGACCGGG 59 105721707 105722907 ATCAGAATGGACATTCGGG 59 NA Mus musculus 50 ENSMUSG00000074555 ENSMUSG00000074555 ENSMUST00000099033 1 1 1 103 2 173951188 173951349 CCATAAGGGTCAGTTTGGA 58 173951103 173951121 AATACCACCTCTAAGCGTG 59 NA Mus musculus 50 Vmn2r-ps11 ENSMUSG00000074581 ENSMUST00000099077 1 1 1 61 3 64437341 64437359 CATCCTGTCAATCTTTGGG 58 64436999 64437316 TACACAAATCTCCCACAGC 59 NA DesignRelaxed Mus musculus 50 BC029127 ENSMUSG00000074732 ENSMUST00000099260 2 1 1 116 19 61193180 61193527 GTGAAATCTGGAGAATGTTCTC 59 61193085 61193106 ACAGTATCACCATATTGGTGAG 59 NA InUTR Mus musculus 50 Plxnc1 ENSMUSG00000074785 ENSMUST00000099337 2 1 1 80 10 94373214 94373232 TTCTACAAGCTCGTTCCTC 59 94369182 94373172 AACAGGAATTCTTCTCACCTC 59 NA Mus musculus 50 OTTMUSG00000015529 ENSMUSG00000074805 ENSMUST00000099381 3 1 1 80 2 129200054 129200482 GTGGAAATATACTCAGTGCTG 58 129200523 129200542 TTTCACCTCAATAATGCTGG 58 NA InUTR Mus musculus 50 Olfr1254 ENSMUSG00000075074 ENSMUST00000111523,ENSMUST00000099764 1 2 2 60 2 89628917 89628937 TACTTCCTTGGTCTTACTGTC 58 89628877 89628896 TAACAAACACCACCATACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1254 ENSMUSG00000075074 ENSMUST00000111523,ENSMUST00000099764 2 2 2 60 2 89628966 89628985 TTTGCCTGTGATATGTATCC 57 89628925 89628943 GACCAAGGAAGTAGGTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1135 ENSMUSG00000075153 ENSMUST00000099853 2 1 1 60 2 87511969 87511987 GTGACATCCCTCCTATCCT 59 87511927 87511948 GTGATTAACTCATTGGTCTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ttc30b ENSMUSG00000075273 ENSMUST00000099996 3 1 1 60 2 75775319 75775337 TAAACTTGATGGGTTGGCT 59 75775277 75775297 TACTTGTATGGTGAGTTTCCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1110017F19Rik ENSMUSG00000075420 ENSMUST00000100221 3 1 1 62 11 115774810 115774828 GCTCTTCGTCTTATTTGCT 57 115774854 115774872 CACTCCTCTTCAAACACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075519 ENSMUSG00000075519 ENSMUST00000100386 3 1 1 60 14 75332092 75332110 AGACTGGATGTGGAATGTC 58 75332134 75332152 TTCTGTTCTCCTGACAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-61 ENSMUSG00000076552 ENSMUST00000103353 1 1 1 172 6 69367172 69367372 AGTCATAATGTCCAGAGGAC 58 69367019 69367037 TGGATGTGCGATAAATCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-57-1 ENSMUSG00000076555 ENSMUST00000103356 1 1 1 123 6 69494647 69494841 TCAGTTGCAATGTCCAGAG 59 69494542 69494562 GCAAGTAACTGGAACTTACAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKC ENSMUSG00000076609 ENSMUST00000103410 2 1 1 60 6 70676652 70676670 CAAGGACGAGTATGAACGA 59 70676694 70676712 AGTTGATGTCTTGTGAGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV8-12 ENSMUSG00000076731 ENSMUST00000103540 1 1 1 60 12 116886257 116886275 ATAACCCATCCCTGAAGAG 58 116886215 116886233 AATACCTGGTTTCTGGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRGV6 ENSMUSG00000076746 ENSMUST00000103555 3 1 1 60 13 19282720 19282739 AGTGATTTGTCTTCAGTCCT 58 19282762 19282780 AATAAGTTCCCGTGTCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001077098.1 ENSMUSG00000078123 ENSMUST00000104922 1 1 1 60 X 89177918 89177936 GGATGAGCAACCTGTAGAG 59 89177876 89177894 GTGAACCTTGTACTTCCTG 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Dnm3os ENSMUSG00000078189 ENSMUST00000104988 1 1 1 107 1 164150205 164150223 ATGAATGAAGGAGTGTGGT 58 164150294 164150312 ACAGGCTTAACACCATGTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 A2A4M7_MOUSE ENSMUSG00000078256 ENSMUST00000105053 2 1 1 99 11 99776074 99776094 ATATCACCCTCTACTCCTGAC 59 99776155 99776173 CAGAGTTGGATTCAGAGCT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 4930408F14Rik ENSMUSG00000078329 ENSMUST00000105122 2 1 1 64 X 31060804 31060822 AATACACCAAAGATGACCG 57 31060850 31060868 AGGTTTGGTTTCAATCTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001078989.1 ENSMUSG00000078625 ENSMUST00000106914,ENSMUST00000106915 3 2 2 80 4 101661518 101661536 TCAGCAGAGACTAAGAGTG 58 101661579 101662574 CACATAGTACTCCTTCACAC 57 NA Mus musculus 50 Ccl21c ENSMUSG00000078732 ENSMUST00000108000 3 1 1 173 4 42392601 42392619 TCTAAGCCTGAGCTATGTG 58 42392364 42392464 CTGTTCAGTTCTCTTGCAG 58 NA Nonspecific Mus musculus 50 Dph1 ENSMUSG00000078789 ENSMUST00000044949,ENSMUST00000108442 1 2 2 82 11 74997781 74999294 TTGGAAAGGTTCACAGAGG 59 74997717 74997735 CTTGCAGTGAAGTCATCCA 59 NA Mus musculus 50 Zfp541 ENSMUSG00000078796 ENSMUST00000108509 3 1 1 85 7 16677641 16677660 CTGGAGACTCTGTTACTCAG 58 16677708 16678203 GTCCAGATGTCTGAACCTG 59 NA Mus musculus 50 A2BE20_MOUSE ENSMUSG00000078879 ENSMUST00000100276,ENSMUST00000108985 1 2 3 80 2 176463305 176463325 GATGCTTCTCAGAAGAGTCTC 59 176463365 176463591 TTCCCAACTGTAACCTATAGC 59 NA Nonspecific Mus musculus 50 Etohi1 ENSMUSG00000078882 ENSMUST00000108998,ENSMUST00000108996,ENSMUST00000108995 2 3 4 60 2 176224433 176224452 TCTCTACAAAGGTGTGATGG 59 176224186 176224411 CCAACTGTAACCTATAGCTG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Itgb2l ENSMUSG00000000157 ENSMUST00000000161,ENSMUST00000113773 1 2 3 85 16 96644722 96646526 CATAAAGGAGAGCCTAGTGTG 59 96644657 96644675 AGATAACAGCCAGCAAGAC 59 NA Mus musculus 50 Csn3 ENSMUSG00000001622 ENSMUST00000001667,ENSMUST00000113267,ENSMUST00000113271 2 3 3 78 5 88356632 88356650 ATTCTGGCATTAACTCTGC 57 88358752 88358770 TGTCATTCTTCTCACCACG 59 NA DesignNoJunction Mus musculus 50 Brpf1 ENSMUSG00000001632 ENSMUST00000113121,ENSMUST00000113119,ENSMUST00000001677 2 3 5 89 6 113268636 113268654 AATGGGCATTGACTTTGAG 58 113268707 113269041 TCCTCTACTGCATCTTCAG 58 NA Mus musculus 50 Slc39a13 ENSMUSG00000002105 ENSMUST00000111436,ENSMUST00000073575 3 2 4 151 2 90905757 90905775 GAAGATGTTCCTCAACAGC 58 90904949 90905068 GATAGCCACTGACTTTGAG 57 NA Mus musculus 50 Tmem161a ENSMUSG00000002342 ENSMUST00000002413,ENSMUST00000116462 1 2 2 201 8 72702793 72702812 GTACTTCAGTACCAAGGAGG 59 72704496 72704620 CTTGATCACAGGGAGTGTC 59 NA DesignRelaxed Mus musculus 50 Cd97 ENSMUSG00000002885 ENSMUST00000109802 3 1 3 82 8 86257361 86257381 GTAACCTGGGATATAAGCTCC 59 86254143 86257318 GCACTCATTCACATCTTGAC 59 NA Mus musculus 50 Ikbkg ENSMUSG00000004221 ENSMUST00000114128,ENSMUST00000004330,ENSMUST00000114129,ENSMUST00000114133,ENSMUST00000114130,ENSMUST00000114127,ENSMUST00000064407 3 7 7 82 X 71688760 71688778 ATAAGCTGAAAGAGGAGGC 59 71688824 71689125 CTTGTAGATATCCGCCTGG 59 NA Mus musculus 50 Wwox ENSMUSG00000004637 ENSMUST00000109108 2 1 3 162 8 117236001 117236019 CTTCTCCAATGAACTGCAC 58 117236145 117398512 CATACATGGCTTCATGGAC 58 NA Mus musculus 50 Cd44 ENSMUSG00000005087 ENSMUST00000111194 3 1 15 81 2 102674485 102679525 AGGGACAACTGATACAGAC 58 102674422 102674440 CAAGTCTTCCACCAAATGG 58 NA Mus musculus 50 BC003331 ENSMUSG00000006010 ENSMUST00000111913,ENSMUST00000006167,ENSMUST00000094477 3 3 4 92 1 152229459 152229477 TAGACTGTACTGTTCACGT 57 152228712 152229404 GTGTAAGTCCACTCTTTGTG 58 NA Nonspecific Mus musculus 50 Cdkal1 ENSMUSG00000006191 ENSMUST00000006353 2 1 4 93 13 29449447 29535889 ATACGATCACAAGATTGGC 57 29449372 29449392 CTCATAGAATCGGTTATGAGC 58 NA Mus musculus 50 Adamts4 ENSMUSG00000006403 ENSMUST00000006570,ENSMUST00000111315,ENSMUST00000111314 2 3 3 93 1 173187948 173187967 GAAATTTGACAAGTGCATGG 58 173188023 173188898 ATCGCTGTATCCATACCTG 58 NA Mus musculus 50 Vav2 ENSMUSG00000009621 ENSMUST00000056176 1 1 2 87 2 27141213 27141231 CTATGAGCTGAAGGAGGTC 58 27138930 27141164 ATAGGACCACTTCTTGATGTC 59 NA Mus musculus 50 Akt1s1 ENSMUSG00000011096 ENSMUST00000107885,ENSMUST00000054343,ENSMUST00000107882,ENSMUST00000107880 3 4 4 61 7 52108282 52108300 CTGAAACAGAGACATCTGG 57 52108325 52109163 CATCATGAAGAGACCTCCA 58 NA DesignRelaxed Mus musculus 50 Vipr2 ENSMUSG00000011171 ENSMUST00000011315 3 1 2 80 12 117381336 117381355 TTATGTGTTGGTTCCTTCCA 59 117381462 117382627 TTTCAGTTCACACTGTACCTC 59 NA Mus musculus 50 B4galnt2 ENSMUSG00000013418 ENSMUST00000038343,ENSMUST00000103158 2 2 2 80 11 95737459 95737478 CTGAATTTCATCCTTCAGCA 58 95735249 95737419 GTATTCCATACTTACTGTGTCC 57 NA Mus musculus 50 4933402N03Rik ENSMUSG00000013668 ENSMUST00000070980,ENSMUST00000013812 3 2 2 138 7 138282716 138289368 AAATTCAACATCTCGGTGG 58 138282596 138282614 TCTCTTCCCAACTCTATGG 57 NA Mus musculus 50 Lamp2 ENSMUSG00000016534 ENSMUST00000061755 3 1 3 84 X 35775022 35777455 AGTATTCTACAGCCCAGGA 59 35774956 35774974 ATCAAGCCTGAAAGACCAG 59 NA Mus musculus 50 Dnttip1 ENSMUSG00000017299 ENSMUST00000017443 2 1 3 80 2 164593252 164593370 GATGACTACAGAGGATGCT 58 164593414 164593432 CATCTTCTCAACCATCCAG 57 NA Mus musculus 50 Ptgis ENSMUSG00000017969 ENSMUST00000088041 2 1 2 83 2 167032289 167032308 GAATTACAACATGCCATGGG 59 167017477 167032244 ATTCCTCCATGTTTGATGCT 59 NA Mus musculus 50 Pmp22 ENSMUSG00000018217 ENSMUST00000108702,ENSMUST00000018361,ENSMUST00000108701,ENSMUST00000108700 2 4 4 61 11 62948002 62948020 GCTACTCCTCATCAGTGAG 58 62964643 62964661 GACAGACAGGATCATGGTG 59 NA DesignNoJunction Mus musculus 50 Calr3 ENSMUSG00000019732 ENSMUST00000019876 2 1 3 106 8 74962530 74967307 AGAGAAAGACAAAGGCCTG 59 74962442 74962460 TGTACTGGATTACCAGGGT 59 NA Mus musculus 50 Dcbld1 ENSMUSG00000019891 ENSMUST00000069004,ENSMUST00000105476 3 2 2 84 10 52036882 52036900 ACGGAATTTACCATCAGCT 58 52036946 52039290 GCTGATAATCTGCCATATCAC 58 NA Mus musculus 50 Btbd11 ENSMUSG00000020042 ENSMUST00000105307,ENSMUST00000038045,ENSMUST00000105306 3 3 4 90 10 85095047 85096439 GAGTATAGGTGTCCCATGG 58 85096493 85096511 CAAACACTGGATGAGAGGT 59 NA Mus musculus 50 Rasgef1c ENSMUSG00000020374 ENSMUST00000093142,ENSMUST00000109172,ENSMUST00000063444 1 3 4 127 11 49770605 49770623 GAATCCACAGAAGGAGAGC 59 49770714 49770878 AAGATGTAGGCTTTCTCGG 59 NA Mus musculus 50 Ascc2 ENSMUSG00000020412 ENSMUST00000109930 1 1 3 137 11 4572492 4579264 CCTAGAAAGGAAGGAGGAG 58 4579450 4579468 TCATCAGCCTGGTATTCTC 58 NA Mus musculus 50 Pecam1 ENSMUSG00000020717 ENSMUST00000106796 1 1 5 126 11 106540880 106540898 CAGAAGTGGAAGTGTCCTC 59 106516466 106523325 CCTTCCGTTCTAGAGTATCTG 59 NA Mus musculus 50 Acly ENSMUSG00000020917 ENSMUST00000107389,ENSMUST00000007131,ENSMUST00000107385 3 3 5 87 11 100380476 100380941 AGGACAAGAAAGAAGTCCTG 59 100380408 100380426 GGGTTGATCTCAAGGTAGG 59 NA Mus musculus 50 Lrrc16 ENSMUSG00000021338 ENSMUST00000072889,ENSMUST00000110402,ENSMUST00000110398,ENSMUST00000060540,ENSMUST00000021771 2 5 7 104 13 24136943 24156457 GACACTTGTATGATGACTCCT 59 24136214 24136235 GGCTTTATCAAGATCAAACTCC 59 NA InUTR Mus musculus 50 Fastkd3 ENSMUSG00000021532 ENSMUST00000051784,ENSMUST00000070793 2 2 4 114 13 68723776 68723794 AAAGATGCTACTGAGGCTC 59 68723872 68724065 TGACTCTTTACCTTGCAGC 59 NA Mus musculus 50 Ttc33 ENSMUSG00000022151 ENSMUST00000022751,ENSMUST00000081640 1 2 2 121 15 5162018 5162036 AAATGTTTCCAGCAGTCCA 59 5162119 5167158 TCGAATTGCCAGAACTATCTC 59 NA InUTR Mus musculus 50 Rbx1 ENSMUSG00000022400 ENSMUST00000023036,ENSMUST00000109569 3 2 2 90 15 81304280 81304298 TTCATTTCCACTGCATCTC 57 81304352 81305527 TAATGCCCATACTTCTGGA 57 NA Nonspecific Mus musculus 50 Rabl2a ENSMUSG00000022621 ENSMUST00000058058,ENSMUST00000023294 3 2 3 80 15 89417392 89417410 TGTCCACATATGCTCTGAC 59 89416755 89417348 CTGTATCCCAGAAGTCCAC 59 NA Mus musculus 50 Muc13 ENSMUSG00000022824 ENSMUST00000115044,ENSMUST00000023520 1 2 2 81 16 33803175 33803193 TGCATAGCAAACACTTCTG 58 33803238 33804675 AATGTCGTTCCTTTCACAC 58 NA Mus musculus 50 D16Ertd472e ENSMUSG00000022864 ENSMUST00000023571,ENSMUST00000114220,ENSMUST00000114219,ENSMUST00000114218 1 4 4 107 16 78548331 78576178 CTAAATCTCGAGGGAGTGC 59 78548242 78548260 AGAACAATCCTGGTTTGCT 59 NA Mus musculus 50 Lmbr1l ENSMUSG00000022999 ENSMUST00000023736 1 1 2 102 15 98745638 98748287 GTGCATCATCTCAATACTTCTG 59 98744011 98745575 TTCATCATCCACTGTGGTG 59 NA Mus musculus 50 Pdpk1 ENSMUSG00000024122 ENSMUST00000102927,ENSMUST00000115407,ENSMUST00000115411,ENSMUST00000115408,ENSMUST00000052462 3 5 5 98 17 24238633 24238652 ATTTGATGAGACCTGTACCC 59 24237861 24238573 TCTGGTTTAAGGTCTCTGTG 58 NA Mus musculus 50 Bin1 ENSMUSG00000024381 ENSMUST00000025239 1 1 3 113 18 32574684 32579507 GAAATCAGGCAGAAGAGGA 58 32579723 32579742 TGACATAGAAACCTACACGG 59 NA Mus musculus 50 Mrps18b ENSMUSG00000024436 ENSMUST00000113782 3 1 2 154 17 36049344 36053252 TTCCTATGTAGCTCAGAATGTG 59 36047890 36048370 AACTGAGAAGACCACACTC 58 NA Mus musculus 50 Smad4 ENSMUSG00000024515 ENSMUST00000025393,ENSMUST00000114939 1 2 2 80 18 73835445 73835466 TGAATCCATATCACTATGAGCG 59 73822513 73834825 TACTTGGAGCATTACTCTGC 59 NA Mus musculus 50 Fen1 ENSMUSG00000024742 ENSMUST00000025651 3 1 2 257 19 10278365 10278383 ATACTGAAAGAACGGGCTC 59 10275536 10275554 AGCAATTAGTTTGGCAAGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Cdca5 ENSMUSG00000024791 ENSMUST00000025704,ENSMUST00000113538 3 2 2 82 19 6090516 6090659 GAAATCCTGAAATCAGAGCTG 59 6090703 6090721 ATCAGAAGCTCAAACTGCT 59 NA Mus musculus 50 Sorbs1 ENSMUSG00000025006 ENSMUST00000099465 1 1 5 94 19 40418847 40418865 AATTGGAGTTTGGGAGACC 59 40411517 40415184 TGCTGAGCTCTTTCTATCC 58 NA Mus musculus 50 Msx3 ENSMUSG00000025469 ENSMUST00000055353,ENSMUST00000106084 2 2 2 66 7 147233905 147233924 ATACTTATCCATTGCGGAGC 59 147233858 147233876 CTTGACCTGAGTCTCAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmc6 ENSMUSG00000025572 ENSMUST00000026659,ENSMUST00000106338 2 2 3 80 11 117634406 117634690 AGGTAATGATTCAGAGACCTG 58 117634346 117634364 GGTTAAGGACACTGACCAC 59 NA Mus musculus 50 Chrng ENSMUSG00000026253 ENSMUST00000113243 3 1 2 87 1 89103323 89104789 CCTGGAGAACAAATCCCAG 59 89104840 89104858 GAAGATCCACTCAATGGCT 59 NA Mus musculus 50 Dtymk ENSMUSG00000026281 ENSMUST00000027503,ENSMUST00000112894 3 2 3 171 1 95697416 95697434 GAACTAGAGGATCACTCCG 58 95691476 95691494 GTTTACACCAATCCAGGGA 59 NA DesignNoJunction Mus musculus 50 Meig1 ENSMUSG00000026650 ENSMUST00000064685,ENSMUST00000115084,ENSMUST00000115083,ENSMUST00000115082,ENSMUST00000115081 1 5 5 60 2 3329120 3329139 AACAAGTGAAACAAGTTGCC 59 3326558 3326576 AGTTTCTTCACGTACCCTG 59 NA DesignNoJunction Mus musculus 50 Pip4k2a ENSMUSG00000026737 ENSMUST00000006912 3 1 3 81 2 18787773 18793926 GAAATACGACTTAAAGGGCTC 58 18774527 18774545 ATCCTTTAAAGTTGGCAGC 58 NA Mus musculus 50 Zbtb43 ENSMUSG00000026788 ENSMUST00000113156 1 1 3 120 2 33317877 33320451 ATACAGCTTTGCTCTTGGG 59 33310633 33317794 CTTGTTTAGTGTGGTTCGAC 59 NA InUTR Mus musculus 50 Odf2 ENSMUSG00000026790 ENSMUST00000113763,ENSMUST00000028128,ENSMUST00000113764 1 3 13 100 2 29747778 29747796 ACCCAGTGTAACTGTTACG 59 29749027 29756609 AATGAGGTGGATTCTTGGT 58 NA Mus musculus 50 Odf2 ENSMUSG00000026790 ENSMUST00000113763,ENSMUST00000028128,ENSMUST00000113764 3 3 13 122 2 29747756 29747774 TCTTGAGAACACCTTGTGG 59 29749027 29756609 AATGAGGTGGATTCTTGGT 58 NA Mus musculus 50 Kynu ENSMUSG00000026866 ENSMUST00000028223,ENSMUST00000100129,ENSMUST00000050511,ENSMUST00000112826 1 4 4 80 2 43418588 43418608 GGATGAGGAAGATAAACTGAG 57 43418648 43436875 GATAGATCAATTGAAGGCAGG 58 NA Mus musculus 50 Camsap1 ENSMUSG00000026933 ENSMUST00000097831 1 1 5 82 2 25808335 25821197 TTCTGGATCAATAAGGTCCG 59 25808272 25808290 ATCAAGTCCTCCAACAACG 59 NA Mus musculus 50 Baz2b ENSMUSG00000026987 ENSMUST00000112550,ENSMUST00000112548,ENSMUST00000112553,ENSMUST00000090925 1 4 4 80 2 59745546 59745564 CAAACTGGATAATGTGGGC 58 59745097 59745502 TCCTCTTCAATTCCGTCAC 59 NA Mus musculus 50 Wdsub1 ENSMUSG00000026988 ENSMUST00000028368,ENSMUST00000102751 2 2 3 83 2 59700772 59700881 CATACCAGGTATGTTACGAC 57 59700708 59700726 AATGTTCACTGTCTTGTCC 57 NA Mus musculus 50 Dync1i2 ENSMUSG00000027012 ENSMUST00000112142,ENSMUST00000112140,ENSMUST00000112144,ENSMUST00000100028,ENSMUST00000112136 2 5 8 158 2 71066664 71066682 TCCTATGTCTCCATCCTCC 59 71071762 71073986 TTAATAGGTCCTCGTCCCA 59 NA Mus musculus 50 Caprin1 ENSMUSG00000027184 ENSMUST00000028607,ENSMUST00000111147 1 2 3 80 2 103609056 103609606 CCAATGGATTTAGAGGAGGA 58 103608995 103609014 ACTGAGACTGTGAATAACCA 58 NA Mus musculus 50 Nat10 ENSMUSG00000027185 ENSMUST00000090447 3 1 2 113 2 103566905 103566923 TTGTACTTCCTGAACCAGC 59 103565908 103566828 ATCATTGAACAGCAACAGC 59 NA Mus musculus 50 Meis2 ENSMUSG00000027210 ENSMUST00000110908,ENSMUST00000074285 2 2 7 133 2 115693091 115694495 AGTCAAATCGAGCAGTGAG 59 115692612 115692631 CATATTCATGCCCATTCCAC 59 NA Mus musculus 50 Prei4 ENSMUSG00000027346 ENSMUST00000028822,ENSMUST00000060955,ENSMUST00000110136,ENSMUST00000110142 1 4 7 86 2 132376281 132379703 TCGAGATTTAGGGTAAAGCTC 59 132376215 132376233 GTGAAGAACAGTGGGAGAG 59 NA Mus musculus 50 2610304G08Rik ENSMUSG00000027651 ENSMUST00000109517,ENSMUST00000109519,ENSMUST00000029180,ENSMUST00000103123,ENSMUST00000099135,ENSMUST00000109518 1 6 6 81 2 157873698 157873716 AGAGGAGGAAGATGATGAC 57 157873759 157875837 GATTAACTCCTCAGTCAAGAG 57 NA Mus musculus 50 Ampd2 ENSMUSG00000027889 ENSMUST00000102638,ENSMUST00000102637,ENSMUST00000106668,ENSMUST00000078912 2 4 5 81 3 107881956 107881974 CATACCCTGACCTACAGGA 59 107881716 107881913 CAGAATGACTTTATGGGACCA 59 NA Mus musculus 50 Lmna ENSMUSG00000028063 ENSMUST00000029699,ENSMUST00000036252 2 2 2 152 3 88290547 88290742 CATTTACAGCGAGGAACTG 58 88290413 88290432 TTATACTGTTCCACCTGGTC 58 NA Mus musculus 50 2510027J23Rik ENSMUSG00000028133 ENSMUST00000039761,ENSMUST00000106467,ENSMUST00000106466 2 3 5 150 3 120859428 120861697 AGCAACATCAAGGAGTACC 59 120859198 120859216 CTTTGACTTCAAACGCCAG 59 NA Mus musculus 50 Jmjd2c ENSMUSG00000028397 ENSMUST00000077851,ENSMUST00000030102 3 2 3 80 4 73917205 73917223 CACGCAATACAACATCCAG 59 73917267 73926812 GGAGTACAGTATTTGCTGC 58 NA Mus musculus 50 Ptprd ENSMUSG00000028399 ENSMUST00000107289,ENSMUST00000072540,ENSMUST00000050757,ENSMUST00000098005,ENSMUST00000084471,ENSMUST00000107287,ENSMUST00000084467 1 7 9 91 4 75889606 75889625 TGAGGCCATTTATGAATGTG 58 75786592 75889552 TAGGAATCTGATCCTCACG 57 NA Mus musculus 50 Dab1 ENSMUSG00000028519 ENSMUST00000106830 2 1 6 168 4 104361035 104390820 TCAACCTGTAAGTGCTGTG 59 104393201 104393219 AGTGCCGAAAGACATAGAG 59 NA Mus musculus 50 Sgip1 ENSMUSG00000028524 ENSMUST00000097946 3 1 9 256 4 102593995 102594015 ACACTCTCATCTCCTAAAGAG 58 102600177 102601397 GTCTGGACTATCTCCAACTC 58 NA DesignRelaxed Mus musculus 50 Slc6a9 ENSMUSG00000028542 ENSMUST00000063857,ENSMUST00000030269 2 2 3 95 4 117515729 117528486 AAAGGGATGTTGAATGGTG 57 117528545 117528563 CAGTACAAACTCGATCTGG 57 NA Mus musculus 50 4930579C15Rik ENSMUSG00000028575 ENSMUST00000107097 3 1 2 108 4 94586617 94586635 TGTACAAACTGAGACACCT 58 94574303 94574444 GTTTGATTGGAGCCTTCTG 58 NA Mus musculus 50 Scp2 ENSMUSG00000028603 ENSMUST00000106700 1 1 4 102 4 107784832 107784850 GATATGGCAAAGGAAGCAG 58 107774949 107780228 AATTTGCCAAGCCATACAC 58 NA Mus musculus 50 Lrp8 ENSMUSG00000028613 ENSMUST00000106734,ENSMUST00000106732 2 2 5 112 4 107520912 107520930 TTTCAGTGTAAGAGTGGCG 59 107521006 107523928 AGACACTCATTTAGCCCAC 59 NA Mus musculus 50 Rragc ENSMUSG00000028646 ENSMUST00000072215,ENSMUST00000030399 3 2 2 224 4 123607117 123607135 GATGGCCATTATCAAGCTG 58 123612880 123612898 AAGGCTTTCAGACTTGGAG 59 NA DesignNoJunction Mus musculus 50 4931406I20Rik ENSMUSG00000028677 ENSMUST00000030439,ENSMUST00000102690,ENSMUST00000116298,ENSMUST00000097914,ENSMUST00000094853 3 5 5 97 4 116945917 116945935 ACATTTGAGGCTCTGAAGG 59 116945719 116945856 ATCGAGTAAGAGTCCATGC 58 NA Mus musculus 50 Mtf1 ENSMUSG00000028890 ENSMUST00000106193,ENSMUST00000030723 2 2 3 118 4 124516150 124519779 CAAGAACAAATTCAGCAAGC 58 124521414 124521433 ATGATCACAGGAACACTGAG 59 NA Mus musculus 50 Plekhm2 ENSMUSG00000028917 ENSMUST00000030751,ENSMUST00000084203,ENSMUST00000105783 2 3 3 80 4 141197413 141197921 GTACTATGTCAGGAACGCC 59 141197351 141197370 ATAAACTCCAACCCAGACAC 59 NA Mus musculus 50 H6pd ENSMUSG00000028980 ENSMUST00000030830,ENSMUST00000084117 1 2 2 60 4 149368596 149368614 GTGGAGATCATCTTGAAGG 57 149358258 149358276 ACTCCTCATAGAAACTGGC 58 NA DesignNoJunction Mus musculus 50 Mll5 ENSMUSG00000029004 ENSMUST00000094962,ENSMUST00000056291,ENSMUST00000115128 1 3 4 80 5 23002302 23002321 GAGTCCTACAGTTAATGGTG 57 23002364 23002805 AGTGGTGTGGTTAAATCTG 57 NA Mus musculus 50 Dnajb6 ENSMUSG00000029131 ENSMUST00000114839,ENSMUST00000008733 1 2 3 96 5 30080108 30080126 GAGTTTGGCTTCACATTCC 59 30080183 30090950 CAAATGGGTCTTCAAAGAAGTC 59 NA Nonspecific Mus musculus 50 Fip1l1 ENSMUSG00000029227 ENSMUST00000113535,ENSMUST00000080164 2 2 4 95 5 74953167 74967134 CCAAGCAGGAGATTACCTG 59 74967192 74967211 ATTGCTGTTCTCATTTGCAC 59 NA Mus musculus 50 Smr1 ENSMUSG00000029280 ENSMUST00000031211,ENSMUST00000031210 3 2 2 60 5 88433789 88433807 TCTTGTAGGATGCTTCCTG 58 88437074 88437095 TCTAGGATCATGTCTTCTAGGG 59 NA DesignNoJunction Mus musculus 50 Foxp2 ENSMUSG00000029563 ENSMUST00000115477,ENSMUST00000031545 2 2 4 100 6 15326739 15326757 GATGCAGCAGATTCTTCAG 58 15326821 15327900 CTTGTAGTTGTTGCTGCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Zkscan1 ENSMUSG00000029729 ENSMUST00000019660 2 1 4 130 5 138535354 138538299 TCTCTTATCCCGAGCTCTC 59 138538687 138538705 CCATGTCCTCGATCTTCAC 59 NA Mus musculus 50 Exoc4 ENSMUSG00000029763 ENSMUST00000012723,ENSMUST00000090381,ENSMUST00000069979,ENSMUST00000115080,ENSMUST00000052266 3 5 5 85 6 33216120 33227195 AATCAAGCAGGTCAAAGAG 57 33227244 33227262 CTTCAATCCACAGCTTACG 58 NA Mus musculus 50 Herc3 ENSMUSG00000029804 ENSMUST00000031823,ENSMUST00000114286 1 2 3 97 6 58844604 58853241 GTGCAAAGACAACAGACAG 59 58853302 58853320 AGTACACGATCACAGTGTG 59 NA Mus musculus 50 Trpm1 ENSMUSG00000030523 ENSMUST00000107525,ENSMUST00000085222,ENSMUST00000098398,ENSMUST00000107516,ENSMUST00000107519,ENSMUST00000107522 1 6 10 82 7 71364117 71365135 CTATACAACACCAGACTGGG 59 71368578 71368596 TAATCAGGTGGAAGGTTGC 59 NA Mus musculus 50 Rbbp6 ENSMUSG00000030779 ENSMUST00000052135 2 1 4 160 7 130140775 130140797 GTCCAGGGAAGAATTCTATAGAG 59 130141207 130142052 AGGGAGATTTAGACCTGGA 58 NA Mus musculus 50 Usp9x ENSMUSG00000031010 ENSMUST00000115466 1 1 3 87 X 12746524 12746542 AACAACCCTCAGAGAACTG 59 12746593 12746613 ATTTCACTGATCCGGTCTG 59 NA Mus musculus 50 Cttn ENSMUSG00000031078 ENSMUST00000103079,ENSMUST00000033407 3 2 2 99 7 151638551 151640589 CTCAGAAAGATTACTCCAAAGG 58 151638473 151638492 TCTGTCTTGCCTTGATACTC 59 NA Mus musculus 50 Dock11 ENSMUSG00000031093 ENSMUST00000033419 3 1 3 95 X 33485712 33485732 GTATTAAGACCTACAGCACAG 57 33485789 33486893 GTCTCAAAGACTTGCATGG 58 NA Mus musculus 50 Acsl4 ENSMUSG00000031278 ENSMUST00000033634,ENSMUST00000112904,ENSMUST00000112903,ENSMUST00000112907 1 4 4 80 X 138768260 138768280 CTACACTACTGGAAGAGTTGG 59 138766914 138768219 ACTGTATAACCACCTTCCTG 58 NA Mus musculus 50 Dcx ENSMUSG00000031285 ENSMUST00000112856 2 1 4 122 X 140310406 140310425 CATGAAAGGGAATCCATCTG 58 140305238 140310321 GTTCCATTTGCTGAGTCAG 58 NA Mus musculus 50 Rs1 ENSMUSG00000031293 ENSMUST00000033650 2 1 2 81 X 157219827 157228711 TTAGACTGTATTCCAGAATGCC 59 157228753 157228771 AGCAAGTGATCTGATCTGG 59 NA Mus musculus 50 Arhgap6 ENSMUSG00000031355 ENSMUST00000033721,ENSMUST00000112131,ENSMUST00000112127,ENSMUST00000112126 1 4 6 80 X 165739697 165739716 AGGAGCCTTTCAATATCTGG 59 165739758 165740257 CATAAGAGCCTGTCATTCCT 59 NA Mus musculus 50 Cd209d ENSMUSG00000031495 ENSMUST00000011445,ENSMUST00000111028 2 2 2 82 8 3873842 3876265 GATGAGGAGCAGACTTTCC 59 3873778 3873798 GCTTCATTATGCATGTCTGAG 59 NA Mus musculus 50 Arhgef7 ENSMUSG00000031511 ENSMUST00000033908,ENSMUST00000110909,ENSMUST00000110914,ENSMUST00000110911,ENSMUST00000110910 3 5 7 194 8 11728405 11758437 ACCATCGAGAAAGTCTACC 58 11781232 11782535 TAGTCCAATGTCTGCTGTC 58 NA Mus musculus 50 Ank1 ENSMUSG00000031543 ENSMUST00000110688,ENSMUST00000084037,ENSMUST00000110685 2 3 6 176 8 24220189 24221837 TCTGAAGATGAAGGTGACG 59 24222330 24222348 TTCAGATCGGATCACAACG 59 NA Mus musculus 50 Ank1 ENSMUSG00000031543 ENSMUST00000084038,ENSMUST00000072833 1 2 6 90 8 24220827 24221837 CACATATCTATAATGGGTGACG 58 24221888 24221906 AATCCAACAGCTCTTTCTC 57 NA Mus musculus 50 Fgl1 ENSMUSG00000031594 ENSMUST00000098813 3 1 2 80 8 42285891 42285910 AAATCAAACCTCTTCAGAGC 58 42285828 42285849 TCTCTGAATTAGTCCATCCC 58 NA Mus musculus 50 Wdr59 ENSMUSG00000031959 ENSMUST00000038193 3 1 3 83 8 113986105 113986123 AAGTCTGACCCAGATTTGG 59 113984797 113986058 GCAATAGTGAGCCAGTAGG 59 NA Mus musculus 50 Drd2 ENSMUSG00000032259 ENSMUST00000075764,ENSMUST00000114494 1 2 2 92 9 49208907 49208925 GTTACTGTCATGATCGCCA 59 49208981 49210183 ACACTCATTCTGGTCTGTG 59 NA Mus musculus 50 Gmppa ENSMUSG00000033021 ENSMUST00000037796,ENSMUST00000113584,ENSMUST00000094822,ENSMUST00000116580 3 4 4 82 1 75438339 75438357 CGATACCAGATCACTCACC 59 75438400 75438578 GGATGGATGTAAACATTTCCTC 59 NA Mus musculus 50 Podxl2 ENSMUSG00000033152 ENSMUST00000089447,ENSMUST00000061262,ENSMUST00000038409 3 3 3 97 6 88795528 88795546 GACCCTTGTAGGAGAACAG 58 88793665 88795062 AGTTCTGGATGCCAATCTC 59 NA Mus musculus 50 Cst10 ENSMUSG00000033156 ENSMUST00000109938,ENSMUST00000047008 2 2 3 160 2 149231319 149231337 AGCCAATACGACTGATGAG 59 149233125 149235720 ATTACAGATGACCCTCTTCTG 58 NA Mus musculus 50 Myh2 ENSMUSG00000033196 ENSMUST00000018641 1 1 2 80 11 67004954 67005194 GAAGAGGAAGTAAAGGCTG 57 67005238 67005256 CTCATATTTGGTCCTCCAC 57 NA Mus musculus 50 AU040829 ENSMUSG00000033389 ENSMUST00000093002 1 1 4 135 11 64816942 64821572 GTCTACAGATCTCGTCCAC 58 64816825 64816843 ACTCTCAGACTCCTCTTCC 59 NA Mus musculus 50 Ppp1r16a ENSMUSG00000033819 ENSMUST00000037551 1 1 2 80 15 76523878 76523896 GTAGAATTGCTTGTGGCAC 59 76523940 76524038 ATCACCACATACATCGAGG 58 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111688,ENSMUST00000111686 3 2 23 87 2 84466236 84466255 GTGCTTCCATGGTTTATCTG 58 84464598 84466186 CGACTCCACCTGTTAAGAG 59 NA InUTR Mus musculus 50 Smc4 ENSMUSG00000034349 ENSMUST00000042901,ENSMUST00000107803 1 2 2 80 3 68831631 68831750 GAACAGTCAGGTACAATGAG 57 68831792 68831811 AGAGATTTCATCGATAACCG 57 NA Mus musculus 50 Smc4 ENSMUSG00000034349 ENSMUST00000042901,ENSMUST00000107803 2 2 2 80 3 68828265 68829758 GAAGATTGGGAGACTTAGGAG 59 68829799 68829818 CAATGTAGTCCAATGCATGG 59 NA Mus musculus 50 Cobll1 ENSMUSG00000034903 ENSMUST00000112431,ENSMUST00000102726,ENSMUST00000072921,ENSMUST00000112422,ENSMUST00000068356 2 5 9 63 2 64943808 64943826 GATGAAATCTCTGAGGGCC 59 64941443 64943781 TTACACCAGAGGTCAAGGA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Crb2 ENSMUSG00000035403 ENSMUST00000050372 1 1 1 60 2 37643257 37643275 ATGGTTTCCAGTGCTACTG 59 37645652 37645672 TCCATATCTTCCTGACATGTC 58 NA DesignNoJunction Mus musculus 50 Gng12 ENSMUSG00000036402 ENSMUST00000043148,ENSMUST00000114228,ENSMUST00000114227,ENSMUST00000114226,ENSMUST00000114225,ENSMUST00000114224,ENSMUST00000114222 2 7 7 124 6 66965821 66967462 CCATCGAAAGAATAAAGGTCTC 58 66967546 66967565 CTTCTTATCCTTGAACGGGT 59 NA Mus musculus 50 Elf1 ENSMUSG00000036461 ENSMUST00000040131,ENSMUST00000110835,ENSMUST00000088767 1 3 3 93 14 79970638 79970656 TTGATTCTAAAGCCGTGTC 57 79970711 79972987 TAATAGTACCTGAGTGCTCTC 58 NA Mus musculus 50 Etl4 ENSMUSG00000036617 ENSMUST00000114610,ENSMUST00000114627,ENSMUST00000114624,ENSMUST00000114620,ENSMUST00000114619,ENSMUST00000045555,ENSMUST00000114614,ENSMUST00000114609,ENSMUST00000066509 1 9 12 80 2 20631222 20634994 TGATGTGAGGAATATCCAAGAC 59 20635034 20635053 TTCGTCATGTGGTTAAATGC 59 NA Mus musculus 50 Mbd5 ENSMUSG00000036792 ENSMUST00000112754,ENSMUST00000047413 2 2 4 116 2 49130280 49134105 TTTCAGAACTTCCAGGTGAG 59 49134184 49134202 GAAATGTGGAAGTGCAAGG 59 NA Mus musculus 50 Ssh2 ENSMUSG00000037926 ENSMUST00000108397,ENSMUST00000037912,ENSMUST00000108396 2 3 3 80 11 77234847 77234865 TGAGTGGAATGCTATGCAG 59 77234908 77238817 TCACGTTCAGTTGGTATGTC 59 NA Mus musculus 50 Prdm1 ENSMUSG00000038151 ENSMUST00000105490,ENSMUST00000039174 2 2 2 81 10 44170036 44176440 CAGCAAAGAGGTTATTGGC 59 44169973 44169991 GTAGACTTCACCGATGAGG 59 NA Mus musculus 50 Osbpl7 ENSMUSG00000038534 ENSMUST00000090020,ENSMUST00000046878 1 2 2 102 11 96913887 96913905 CTCAAGAAGAGGAAGTGGC 59 96914128 96915438 CCTTGGTGATATCTTGTCGA 59 NA Mus musculus 50 Zfp335 ENSMUSG00000039834 ENSMUST00000094343 1 1 2 187 2 164726941 164726959 CAAGGATGTTATTCGCCAC 58 164725522 164725787 ACACTTGAATCTTATCGCAC 58 NA Mus musculus 50 Rere ENSMUSG00000039852 ENSMUST00000105682,ENSMUST00000037916 1 2 4 161 4 149805692 149813459 ACTTCAAACTGGTCCACAG 59 149842810 149842828 TCATGAGTAGATGGTCCCT 58 NA Mus musculus 50 Sh3kbp1 ENSMUSG00000040990 ENSMUST00000073094,ENSMUST00000112456,ENSMUST00000080394,ENSMUST00000112451,ENSMUST00000112449 3 5 8 86 X 156266511 156303276 GACAATTGGGAAGAAGTTACC 58 156303322 156316063 TAATCCTTGGTCTTTGTCCTG 59 NA Mus musculus 50 Serpina3h ENSMUSG00000041449 ENSMUST00000049922,ENSMUST00000116393 2 2 3 62 12 105489908 105489926 CTTACAACCAGAGACCCTG 59 105489952 105490909 AGCTCATCTATCCTCCTGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Pgm5 ENSMUSG00000041731 ENSMUST00000047666 1 1 2 80 19 24894724 24898789 ATTCAGAGTGGAGATTGTGG 59 24894663 24894682 CTCTTGATGGCGTTAAAGTC 58 NA Mus musculus 50 Pbrm1 ENSMUSG00000042323 ENSMUST00000112098,ENSMUST00000112089,ENSMUST00000112088,ENSMUST00000090214 3 4 11 243 14 31920482 31923604 AAGCAGAATATGAAGAGCG 57 31927080 31927098 CTAACAAGGCCATCAACTG 58 NA DesignRelaxed Mus musculus 50 Agps ENSMUSG00000042410 ENSMUST00000047232,ENSMUST00000111951 3 2 3 113 2 75747718 75747736 GGGAATTAGTGACCCACTG 59 75749733 75763994 TTTCGTATCTTGCCCACTC 59 NA Mus musculus 50 9630041N07Rik ENSMUSG00000044296 ENSMUST00000109134,ENSMUST00000049625 2 2 3 68 11 50651922 50651940 GGAGAACTACAGCAACCTG 59 50651468 50651486 TCTAACTGAGCGATGACCT 59 NA DesignNoJunction Mus musculus 50 Uqcrq ENSMUSG00000044894 ENSMUST00000061326,ENSMUST00000109021,ENSMUST00000109019 2 3 3 141 11 53242633 53242651 GTTTGTAGTGGTCTACCTG 57 53242510 53242528 GAGAAGGGTCTTTCAGAGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 1700029I15Rik ENSMUSG00000044916 ENSMUST00000054316 3 1 2 105 2 92223435 92223619 GATGACTATGGGCTCAGAC 59 92223688 92223706 AATAGTCAGCCATGTTGGG 59 NA DesignNoJunction Mus musculus 50 Cetn4 ENSMUSG00000045031 ENSMUST00000102955,ENSMUST00000075537 3 2 3 83 3 37208976 37209222 AACTGAAGATTGCAATGAGG 58 37208912 37208930 CTTCCTTGTCGATTTCAGC 58 NA Nonspecific Mus musculus 50 Lrfn4 ENSMUSG00000045045 ENSMUST00000113822,ENSMUST00000053597 2 2 2 63 19 4614109 4614127 TCTCAGTGGCAATCAACTG 59 4614064 4614082 GAGACTGTCAAGGAAGTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp688 ENSMUSG00000045251 ENSMUST00000106300,ENSMUST00000051352 2 2 2 73 7 134562940 134562958 CCAAACACCGATATTCAGG 58 134562885 134562903 GATGGATAGGTAAACCGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Wdr40b ENSMUSG00000045284 ENSMUST00000115056,ENSMUST00000060481 1 2 2 60 X 42141892 42141910 TCCACCAGCATATTGTCAC 59 42141850 42141869 CGGATGTCATAGAAGAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1190002N15Rik ENSMUSG00000045414 ENSMUST00000113028,ENSMUST00000061904 3 2 2 81 9 94424850 94424868 GTAATCATTGTGGATGCCG 58 94421042 94421060 ATACGTCCCAATTCTCAGG 58 NA DesignNoJunction Mus musculus 50 Mipol1 ENSMUSG00000047022 ENSMUST00000101401 3 1 3 81 12 58433377 58433397 ATGTAGGAAGAGAATAACCGC 59 58433440 58453718 CTCTGCAGTTAGCTGAGAC 59 NA Mus musculus 50 Rnf31 ENSMUSG00000047098 ENSMUST00000019443 2 1 2 81 14 56211381 56211399 AGATGAATACCAGGTTGCT 58 56211444 56211678 ATGAGTATTCTGCAACAGC 57 NA Mus musculus 50 Cltc ENSMUSG00000047126 ENSMUST00000060766 2 1 3 84 11 86547341 86550574 AGGTATAAAGGATTCTGGCA 58 86547276 86547295 ATCATCAGTCATGGTATGGG 58 NA Mus musculus 50 Defb9 ENSMUSG00000047390 ENSMUST00000057076 3 1 1 136 8 22992387 22992405 TGCCAACTCTATAATCGGT 58 22992269 22992287 TTATGTTCTTGCAGCACCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lix1 ENSMUSG00000047786 ENSMUST00000097389 2 1 2 107 17 17586083 17586101 AAGGAGTGCCTATTGTGAG 58 17591294 17594080 GAGATGACTTCCTGTCGAG 59 NA Mus musculus 50 EG233164 ENSMUSG00000048312 ENSMUST00000050375 1 1 2 182 7 48296070 48296088 AGTTCACCTTTCTTTGGGA 58 48296234 48298179 CATTTGAACCACCATGAGC 59 NA Mus musculus 50 Osr1 ENSMUSG00000048387 ENSMUST00000057021 1 1 1 85 12 9586540 9586558 TTACACCTGTGACATCTGC 59 9587303 9587321 AAGGCTTCTCTTTGGAGTG 59 NA DesignNoJunction Mus musculus 50 Nkx1-2 ENSMUSG00000048528 ENSMUST00000054562,ENSMUST00000106174 2 2 3 108 7 139788927 139788945 CTGCCCTATCAGACTTTCC 59 139788837 139788855 CAAGGAATGGAGTGAAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Igf2 ENSMUSG00000048583 ENSMUST00000000033,ENSMUST00000053222,ENSMUST00000105936,ENSMUST00000097936,ENSMUST00000105935 1 5 5 112 7 149840258 149840276 CTCCTGGAGACATACTGTG 58 149839917 149839935 TATTGGAAGAACTTGCCCA 58 NA DesignNoJunction Mus musculus 50 EG622976 ENSMUSG00000048621 ENSMUST00000060013 1 1 1 60 X 106393504 106393525 GTCATGTACAAGTATTTGCCAG 59 106393546 106393564 TCTAATGTGGTCACCTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lrp1b ENSMUSG00000049252 ENSMUST00000052550,ENSMUST00000100131 2 2 2 81 2 40457110 40466964 CATATCAGCACAAGGAGCA 59 40457047 40457068 CTAAACCAATCACTAGAGTGGT 59 NA Mus musculus 50 NM_028157.2 ENSMUSG00000050876 ENSMUST00000066510 3 1 1 60 13 59803514 59803532 TAATTCTGAGACAGACCCA 57 59803472 59803491 AGCCTTTGAAATGTTTCCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp46 ENSMUSG00000051351 ENSMUST00000069195,ENSMUST00000097841 1 2 2 60 4 135843194 135843212 GTGATGCAGGAGAATTACG 58 135845883 135845901 CATTCTCGCTCCTGATCTC 59 NA DesignNoJunction Mus musculus 50 Trpm3 ENSMUSG00000052387 ENSMUST00000099564,ENSMUST00000087569 3 2 7 81 19 22824320 22841129 CAATTAGACCCAATTGGAATCG 59 22841169 22841189 CAATTGAGATCACATTGGGTC 59 NA Mus musculus 50 Nav2 ENSMUSG00000052512 ENSMUST00000064315 2 1 5 131 7 56502566 56617483 CAGATCTACACGGATTGGG 59 56617576 56627697 CTTGTCATTTGCTACAACCTG 59 NA Mus musculus 50 Nav2 ENSMUSG00000052512 ENSMUST00000064383,ENSMUST00000064315,ENSMUST00000107611 3 3 5 105 7 56617489 56617507 CATTACCTCGCTAAATCCG 58 56617576 56627695 TGTCATTTGCTACAACCTG 57 NA Mus musculus 50 C130026L21Rik ENSMUSG00000052848 ENSMUST00000064930 3 1 1 91 5 112011512 112011530 CACCAGGACATCATATTCG 57 112014908 112014926 ACAAACTCCACTAGCATCC 59 NA DesignNoJunction Mus musculus 50 Casc3 ENSMUSG00000052915 ENSMUST00000037915 1 1 4 81 11 98661672 98661690 CCAAAGAAGGAGGAGACTG 59 98663620 98664104 AAGAAGGAACAGCCAAGAC 59 NA Mus musculus 50 Glis3 ENSMUSG00000052942 ENSMUST00000065113,ENSMUST00000112612 3 2 2 82 19 28606473 28614705 TCCTTCAGATACCAGGTCC 59 28606409 28606427 TCAAGGCTGATTGACTCTC 58 NA Mus musculus 50 Stam2 ENSMUSG00000055371 ENSMUST00000081656 2 1 4 60 2 52578962 52578980 AGGGTAAACCATAAGGTCC 58 52575590 52578938 ATACTTTAGGATGAGCGGT 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Grik2 ENSMUSG00000056073 ENSMUST00000105483,ENSMUST00000095710 1 2 6 90 10 49243551 49243569 CTCCATCATCGAGAAGTGG 59 49215958 49243499 CAATCTGTCCGTCATAAATCC 58 NA Mus musculus 50 Centa1 ENSMUSG00000056413 ENSMUST00000110865,ENSMUST00000070498,ENSMUST00000075389 3 3 3 114 5 139756764 139769100 ATACTCTACAGGCTACCGT 59 139756668 139756687 GTTGAAGTATTTCAGGGCAC 59 NA Mus musculus 50 Acbd4 ENSMUSG00000056938 ENSMUST00000024492,ENSMUST00000107040,ENSMUST00000107039,ENSMUST00000074474,ENSMUST00000092558 1 5 6 138 11 102965459 102965477 CTCTGAGATGAAGCTGGTG 59 102965839 102965857 TCTCAAGAAGGTTTCTGGG 58 NA DesignNoJunction Mus musculus 50 Skap1 ENSMUSG00000057058 ENSMUST00000049000 3 1 7 160 11 96402783 96569880 CAGATTATCAGGACGAGGG 58 96570002 96572191 TGGACTAGAAGCTGTAAACTC 59 NA Mus musculus 50 Rpgrip1 ENSMUSG00000057132 ENSMUST00000111599 3 1 3 81 14 52760877 52760895 TCCTGGACTTCAAGAACAG 58 52760939 52768900 TTGAAATCACCAGATGTTGG 58 NA Mus musculus 50 Scn3a ENSMUSG00000057182 ENSMUST00000066432 3 1 3 87 2 65345329 65346349 CTAGTGACACTGGTACCAC 59 65345260 65345278 GAATCCTCCAGCATTTCCA 59 NA Mus musculus 50 Musk ENSMUSG00000057280 ENSMUST00000081919,ENSMUST00000098059,ENSMUST00000084578,ENSMUST00000102893 3 4 5 106 4 58357172 58360731 TCAGCATAGCAGAATGGAG 59 58366884 58366903 GAAGACAAGAGCATCTTTCG 58 NA Mus musculus 50 Lgals8 ENSMUSG00000057554 ENSMUST00000064217,ENSMUST00000099821,ENSMUST00000099820 1 3 3 80 13 12548658 12548677 TTACTGAGCAATTGAAGCCT 59 12547199 12548617 AGTCAACCTGGAATCTTTCTG 59 NA Mus musculus 50 Lmcd1 ENSMUSG00000057604 ENSMUST00000032376,ENSMUST00000089151 2 2 2 89 6 112265896 112278665 AGTGGAATACGTCTGTGAG 58 112278718 112278736 CACTGTTTGCTGTATCCAG 58 NA Mus musculus 50 Lepr ENSMUSG00000057722 ENSMUST00000084387 2 1 4 85 4 101445574 101445592 CCTATACGCTTGTCATGGA 58 101446846 101452713 CCATGAGAAGGTAAGGTCC 59 NA Mus musculus 50 EG381438 ENSMUSG00000058174 ENSMUST00000079755,ENSMUST00000108105 2 2 4 159 3 37615079 37615097 AGTCACCGAGACTAGACAG 59 37613952 37613970 TGATGAAGTTCTGGTTGCT 59 NA DesignNoJunction, InUTR Mus musculus 50 Gcap14 ENSMUSG00000058690 ENSMUST00000111893,ENSMUST00000067700 2 2 3 83 14 37709494 37709514 GTCAGCAGAAATCTAAAGAGG 58 37692939 37709449 GTACTTGAGGAGGAATCCG 59 NA Mus musculus 50 Rpl35a ENSMUSG00000060636 ENSMUST00000115079,ENSMUST00000078804,ENSMUST00000115078,ENSMUST00000115076,ENSMUST00000115075 3 5 5 60 16 33057601 33057622 GATGTGCTTATGTGTATAAGGC 59 33058779 33058797 TTGTTTGGTTTACCTCCAG 57 NA Nonspecific, DesignNoJunction Mus musculus 50 Olfr920 ENSMUSG00000061039 ENSMUST00000114994,ENSMUST00000074740 1 2 2 60 9 38563635 38563654 GATCGTTATGTGGCTATCTG 57 38563677 38563695 ACATCTTCGGAGACATGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Myl4 ENSMUSG00000061086 ENSMUST00000018800,ENSMUST00000106957,ENSMUST00000106956 3 3 3 114 11 104445338 104445356 GATGAAGATCACCTACGGG 59 104445434 104445763 GGAACTCATCTCTTCAGGC 59 NA Mus musculus 50 Stx17 ENSMUSG00000061455 ENSMUST00000107720,ENSMUST00000064765 1 2 4 100 4 48144812 48153300 CATCGAGAAGTATCAGCGG 59 48171689 48171707 TTTCTCGGATATTGGAGCG 59 NA Mus musculus 50 Ksr2 ENSMUSG00000061578 ENSMUST00000111949 3 1 2 110 5 118067011 118118310 CCAATTTCTCTGCAAACAC 57 118121434 118121452 GAGACATCCAGTACTTGGT 58 NA Mus musculus 50 Tnnt3 ENSMUSG00000061723 ENSMUST00000105955,ENSMUST00000105952,ENSMUST00000105957,ENSMUST00000074187,ENSMUST00000105947,ENSMUST00000105946,ENSMUST00000105945,ENSMUST00000105941 3 8 20 168 7 149689961 149690163 CAAGAGGAAGAAGTCCAGG 59 149697210 149697228 CAAAGTGGCTGTCAATGAG 59 NA Mus musculus 50 Tnnt3 ENSMUSG00000061723 ENSMUST00000105955,ENSMUST00000105952,ENSMUST00000105957,ENSMUST00000074187,ENSMUST00000105947,ENSMUST00000105946,ENSMUST00000105945,ENSMUST00000105941 1 8 20 166 7 149689963 149690165 AGAGGAAGAAGTCCAGGAG 59 149697210 149697228 CAAAGTGGCTGTCAATGAG 59 NA Mus musculus 50 Slc22a12 ENSMUSG00000061742 ENSMUST00000113452,ENSMUST00000071115,ENSMUST00000113451 2 3 3 85 19 6538790 6540337 TTATTCATGGTGGCTACCA 58 6538723 6538741 CTACCCTCTGTAGTTCCTG 58 NA Mus musculus 50 Scfd2 ENSMUSG00000062110 ENSMUST00000075848 2 1 3 82 5 74858639 74858658 CAGTTCAAACTCTGAAGCAC 59 74854659 74858594 AAAGGAGCACTGTAGAAGG 58 NA Mus musculus 50 OTTMUSG00000000651 ENSMUSG00000062551 ENSMUST00000110335,ENSMUST00000054932,ENSMUST00000099658,ENSMUST00000110331 1 4 5 114 13 27947097 27947115 TATTCTAAAGTGCCTGGGC 59 27947191 27948325 TCAGAAGAGCTTCATAGTGTG 59 NA Mus musculus 50 Actg1 ENSMUSG00000062825 ENSMUST00000106215 3 1 5 113 11 120209368 120209386 CACTCGTCATTGACAATGG 58 120208654 120209292 CAAACATTATCTGGTGTCGG 58 NA DesignRelaxed Mus musculus 50 Ldha ENSMUSG00000063229 ENSMUST00000048209,ENSMUST00000107634,ENSMUST00000005051 2 3 3 60 7 54103102 54104350 GTATCTTAATGAAGGACTTGGC 58 54104371 54104389 AGTTTGTCTTCCATGACGT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ptpla ENSMUSG00000063275 ENSMUST00000114753,ENSMUST00000091429,ENSMUST00000074854,ENSMUST00000114755 3 4 4 135 2 13966851 13966869 GCTATTGCTATGGTACGCT 59 13966487 13966581 TGGGTACAATTCCGATCAG 59 NA Mus musculus 50 Krr1 ENSMUSG00000063334 ENSMUST00000099281 3 1 2 84 10 111420100 111421603 GAAGCCAAATAAACTTCTACCG 59 111421648 111421666 CCAGTTTCTTCGTCTTTGC 59 NA Mus musculus 50 Arhgap22 ENSMUSG00000063506 ENSMUST00000068112,ENSMUST00000111955 1 2 4 86 14 34172502 34177587 TGTTTGACAGGTTTCTGGA 58 34177637 34177655 TAGGACCAAAGACAGTTGC 59 NA Mus musculus 50 Slco1a5 ENSMUSG00000063975 ENSMUST00000081380,ENSMUST00000111825 3 2 3 99 6 142190581 142190602 GCAGTACTTTATCATGTCGG 58 142186086 142186107 CTTCTCTTCAGACTTGATACAC 58 NA Mus musculus 50 Defcr24 ENSMUSG00000064213 ENSMUST00000080533 2 1 1 115 8 22845760 22845779 TATTGTAGAGCAAGAGGCTG 59 22845857 22845875 CATCTTGTCCTCTGTGGTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Tank ENSMUSG00000064289 ENSMUST00000078074,ENSMUST00000112501,ENSMUST00000112502,ENSMUST00000112495,ENSMUST00000112497,ENSMUST00000112494 1 6 7 108 2 61465888 61481781 CAATCAAAGGTGAGACGAC 58 61482374 61482392 GGTCCCAGAAAGTCTTCTC 59 NA Mus musculus 50 Tank ENSMUSG00000064289 ENSMUST00000078074,ENSMUST00000112501,ENSMUST00000112502,ENSMUST00000112495,ENSMUST00000112497,ENSMUST00000112494 3 6 7 114 2 61465882 61481778 GATAAGCAATCAAAGGTGAGAC 59 61482374 61482392 GGTCCCAGAAAGTCTTCTC 59 NA Mus musculus 50 Ccl27 ENSMUSG00000066202 ENSMUST00000107988 3 1 3 158 4 42664558 42664576 ATTGAGGAGATACGAGGTG 58 42665023 42665041 GACAAACAGCTCATTAGGC 58 NA Nonspecific, DesignNoJunction Mus musculus 50 2010100O12Rik ENSMUSG00000067847 ENSMUST00000088610,ENSMUST00000109598,ENSMUST00000109597 1 3 3 60 2 155971443 155971462 CTAATTAGGGCTAGGATGCC 59 155971485 155971503 GTACAAGGGTCGAAATGGA 59 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Mus musculus 50 Cenpb ENSMUSG00000068267 ENSMUST00000103187,ENSMUST00000089510 2 2 2 60 2 131004459 131004478 GACATAGCAACTTGCTTTCG 59 131004418 131004437 TGGTGATAGTGGCATTAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp748 ENSMUSG00000069204 ENSMUST00000053289 3 1 2 142 13 67647670 67653967 GGAAATGCTGTCATTCAGG 58 67646341 67647564 TAGAGAAAGCAAGACCCAG 58 NA Nonspecific Mus musculus 50 Art5 ENSMUSG00000070424 ENSMUST00000106940,ENSMUST00000106934 3 2 7 95 7 109246758 109246776 ATCCAACACCTTGTACTGG 59 109246387 109246405 ACCAAGAAGACTTCGTGTG 59 NA DesignNoJunction Mus musculus 50 Tmem132b ENSMUSG00000070498 ENSMUST00000031446 3 1 1 154 5 126118570 126118588 TGTGAAGATAACGGCTGTG 59 126178940 126178959 GAATCTCATAGAAGGAGCCG 59 NA DesignNoJunction Mus musculus 50 Gprasp2 ENSMUSG00000072966 ENSMUST00000096320,ENSMUST00000113136 2 2 2 263 X 132375450 132375764 CTCAGATCTTGGAGGACTC 58 132376265 132376283 TACCAATGAGACTCCTACC 57 NA DesignRelaxed, InUTR Mus musculus 50 4921506M07Rik ENSMUSG00000073070 ENSMUST00000101398 3 1 1 61 12 58717372 58717390 TACGGAACATCCAGTTGTG 59 58718458 58718476 AGATGCTTGACACAGTCTC 59 NA DesignNoJunction Mus musculus 50 EG667977 ENSMUSG00000073402 ENSMUST00000040467,ENSMUST00000097335 2 2 2 90 17 36302342 36302361 GGAGTTGTGATCATCATTGG 58 36302093 36302111 CAGCCAGAGCATAGTTCTC 59 NA DesignNoJunction Mus musculus 50 Ankrd11 ENSMUSG00000074043 ENSMUST00000098333 3 1 1 66 8 125498654 125498672 TTCATACCCATTCCTGAGC 59 125455936 125455954 TGACACCAGCTGATTTCTG 59 NA DesignNoJunction Mus musculus 50 Bglap-rs1 ENSMUSG00000074489 ENSMUST00000107543,ENSMUST00000107542 3 2 3 182 3 88173522 88174059 TCAATGACGGAATCAGAGG 59 88173071 88173232 AAGGCTTTGTCAGACTCAG 59 NA InUTR Mus musculus 50 IGKV4-57 ENSMUSG00000076556 ENSMUST00000103357 1 1 1 82 6 69526041 69526059 TCTGGGACCTCTTACTCTC 59 69525977 69525995 TAACTACTCCTTTGCTGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S52 ENSMUSG00000076716 ENSMUST00000103525 2 1 1 83 12 116432018 116432039 GATTGGAGTGATTAATCCTGGA 59 116431956 116431974 GATTTGTCTGCAGTCAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV6-1 ENSMUSG00000076762 ENSMUST00000103571 2 1 1 60 14 53258205 53258223 GCTTTAGTGACTGTGATGC 58 53258357 53258375 TCTGGGTTACTGAGTCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Etohi1 ENSMUSG00000078889 ENSMUST00000109027,ENSMUST00000109018 1 2 9 85 2 175921857 175921877 CCAAACTTCTAGAAGTCATGG 58 175918991 175919011 CTTCGTAGACTTTCTCTTCTG 57 NA Nonspecific, DesignNoJunction Mus musculus 50 Tmsb10 ENSMUSG00000079523 ENSMUST00000114050,ENSMUST00000114049,ENSMUST00000114048 3 3 3 239 6 72907614 72907632 AAGAGGAGTGAAATCTCCT 57 72907393 72907411 TAATATCCCAGGGCAAACC 59 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Mus musculus 50 mmu-mir-699 ENSMUSG00000080643 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Tssk3 ENSMUSG00000000411 ENSMUST00000000421 1 1 1 86 4 129166957 129167707 AGAGTTTATCCAGAGATTCCTG 59 129166892 129166910 AGCATCTCATACACCTGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Epn2 ENSMUSG00000001036 ENSMUST00000108713,ENSMUST00000001063,ENSMUST00000116368 2 3 6 64 11 61347082 61347100 AAAGAAAGAGGCGAAAGCT 59 61346158 61346177 AATCCAACAAGGTAGTCTGC 59 NA DesignNoJunction Mus musculus 50 Pcbp3 ENSMUSG00000001120 ENSMUST00000001148,ENSMUST00000105411,ENSMUST00000092393 1 3 3 87 10 76260594 76260612 AATCGTTACAATCACAGGC 58 76252600 76260545 GGAATTAATGATGTCCTCCTC 57 NA Mus musculus 50 Folh1 ENSMUSG00000001773 ENSMUST00000107271,ENSMUST00000001824 3 2 2 89 7 93871845 93871866 GAGAATTATGAATGACCAGCTG 59 93868350 93871797 ATGATATGCCTGTAGAAAGGC 59 NA Mus musculus 50 Tmem25 ENSMUSG00000002032 ENSMUST00000114705,ENSMUST00000002100,ENSMUST00000085951 1 3 3 82 9 44604687 44606212 ATGTGCAATTCAAACCAGAG 59 44604624 44604642 AAACAGGACAACCAGAAGG 59 NA Mus musculus 50 Axl ENSMUSG00000002602 ENSMUST00000108398,ENSMUST00000002677,ENSMUST00000085948 3 3 3 80 7 26548350 26548368 CAGTGGTATGGAGTACCTG 58 26546569 26548306 ATGTTCTCATTCAGCATGC 58 NA Mus musculus 50 Es2el ENSMUSG00000003527 ENSMUST00000003621 1 1 1 81 16 17908010 17910010 GACCTAGATGATGCAGGAG 58 17907947 17907965 TGTACTGGCTCAAGAAGAC 58 NA Mus musculus 50 Hmox2 ENSMUSG00000004070 ENSMUST00000004172 1 1 1 83 16 4765031 4765052 CCTGAATTTGAAGACCAAAGAG 59 4765094 4765779 TCCAGTTCACTGAATATCTGC 59 NA Mus musculus 50 Cd44 ENSMUSG00000005087 ENSMUST00000005218,ENSMUST00000111200,ENSMUST00000111199,ENSMUST00000111198,ENSMUST00000111197,ENSMUST00000111196,ENSMUST00000060516,ENSMUST00000111195,ENSMUST00000111194,ENSMUST00000099673,ENSMUST00000111193,ENSMUST00000111192,ENSMUST00000111191,ENSMUST0 1 15 15 80 2 102705486 102705504 TCAACAGTACCTTACCCAC 58 102701840 102705442 CTATGAACCCATACCTGCA 58 NA Mus musculus 50 2510048L02Rik ENSMUSG00000006241 ENSMUST00000006403 2 1 1 80 9 21736320 21736338 CCTGAATCACTCTGTGACC 59 21736382 21737257 CTCAGCACTTCTTCAAGCT 59 NA Mus musculus 50 Tek ENSMUSG00000006386 ENSMUST00000073939,ENSMUST00000102798,ENSMUST00000071168 1 3 3 80 4 94504085 94516319 CCTTAGTGACATTCTCCCT 57 94516363 94516381 GTCCAAGAAACCATAGCTG 58 NA Mus musculus 50 Homer1 ENSMUSG00000007617 ENSMUST00000080127,ENSMUST00000109490 2 2 10 95 13 94126022 94156305 CATTTCCACATAGTGCTGG 58 94157507 94157525 CTTTGAGGGTAGCTAGCTC 59 NA Mus musculus 50 Ube2g2 ENSMUSG00000009293 ENSMUST00000009437 1 1 1 83 10 77104313 77106222 CCATCCCAACATCTATCCTG 59 77106268 77106286 CTGCTCTCATAACCCATGG 59 NA Mus musculus 50 Slc16a12 ENSMUSG00000009378 ENSMUST00000009522 1 1 1 80 19 34751827 34751845 CTACTGGTTTCATCCTGGG 59 34749868 34751785 ATCCAAGACCTGTAAGAACTC 59 NA Mus musculus 50 Tex11 ENSMUSG00000009670 ENSMUST00000113718,ENSMUST00000009814,ENSMUST00000113716 1 3 3 80 X 98075425 98077595 GGTTTCTTATAAGCTGTCCCT 59 98075365 98075383 GCTGCTACAAGTAAACACG 59 NA Mus musculus 50 Ick ENSMUSG00000009828 ENSMUST00000044551 3 1 1 82 9 78001532 78003163 ACACCAAAGAAGACTGACTG 59 78003208 78003226 TTATTGGGTATGCACTGGG 59 NA Mus musculus 50 Vipr2 ENSMUSG00000011171 ENSMUST00000011315 2 1 2 141 12 117331218 117333205 CAGACCAGGAAACATAAGCA 59 117361200 117361219 GGTATAAATGGCCTTCACCA 59 NA Mus musculus 50 4833413E03Rik ENSMUSG00000013562 ENSMUST00000013706 2 1 1 64 17 31694607 31694625 GACAAAGGCTTTGCATCTG 59 31694653 31694671 ATGGTTCCTGGTTTGACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4631426E05Rik ENSMUSG00000013611 ENSMUST00000013755,ENSMUST00000110365 1 2 2 80 15 36453305 36455340 GTCACTTTCCTTGGAACTC 57 36453243 36453264 ATACTGAAATCTCAGCTCTAGG 58 NA Mus musculus 50 Mrpl32 ENSMUSG00000015672 ENSMUST00000015816 3 1 1 120 13 14703721 14703740 GAAGTTAACCGATGTAGGAG 57 14702938 14702959 CATAGCAATATCCACAAAGGAC 59 NA DesignNoJunction Mus musculus 50 Il10 ENSMUSG00000016529 ENSMUST00000016673 3 1 1 108 1 132917592 132917916 GACTTTAAGGGTTACTTGGG 57 132917987 132918005 AATGCTCCTTGATTTCTGG 57 NA Mus musculus 50 Rabl4 ENSMUSG00000016637 ENSMUST00000016781 2 1 1 81 15 77994674 77994692 ACAAACAGTGGATTCAGCT 59 77990130 77994631 CATCTCCTTCACAGATGTCTC 59 NA Mus musculus 50 Mrps18c ENSMUSG00000016833 ENSMUST00000016977,ENSMUST00000112901 3 2 2 212 5 101228571 101228590 TTTCTGTGATTTGGAGACGA 59 101232119 101232997 CACAAAGACCTGTTATGTGC 59 NA DesignRelaxed Mus musculus 50 Derl2 ENSMUSG00000018442 ENSMUST00000108523,ENSMUST00000018586 3 2 2 87 11 70831861 70832646 GCAGTTGGAATTGATCACAC 59 70829282 70829300 ATTGGTGATTAGCCTCCAG 59 NA DesignNoJunction Mus musculus 50 Tbx3 ENSMUSG00000018604 ENSMUST00000018748,ENSMUST00000079719 3 2 2 105 5 120128832 120130413 AACCTCAAAGATCTGTGTCC 59 120130481 120130499 TAGTGGTGGAAATCTTGGC 59 NA Mus musculus 50 Zfp687 ENSMUSG00000019338 ENSMUST00000019482,ENSMUST00000107244 1 2 2 107 3 94812409 94812520 AGGAACATGGTAAGTCAGTG 59 94812321 94812339 TGATTCCCTCATGGTTGAC 59 NA Mus musculus 50 Gipc1 ENSMUSG00000019433 ENSMUST00000019577 1 1 1 81 8 86186030 86186143 CTTCATTAAGCGCATCAAGG 59 86186185 86186205 GTTGATGGCTTCAATCATGTC 59 NA Mus musculus 50 Nudt4 ENSMUSG00000020029 ENSMUST00000020217 3 1 1 130 10 95014100 95014118 AAAGGAAAGCTAGGCAGAC 59 95012115 95012421 CTCTTCCTTCCTATATTCACGG 59 NA Mus musculus 50 Herc4 ENSMUSG00000020064 ENSMUST00000092452,ENSMUST00000020258 2 2 2 80 10 62750743 62751803 CAGATATCTCAGCAGGTGG 59 62751847 62751865 AGCTTCAACATCAGGTAGG 58 NA Mus musculus 50 Osbpl8 ENSMUSG00000020189 ENSMUST00000105275,ENSMUST00000040683,ENSMUST00000095310 3 3 3 82 10 110707709 110709139 ACAACTTCCAGTTGAATGAC 58 110709181 110709202 CTCCTTGTCAGATTTATCAGAG 57 NA Mus musculus 50 Phlda1 ENSMUSG00000020205 ENSMUST00000020424 1 1 1 71 10 110944123 110944141 CAAGCTGAAGGAATTGCAC 59 110944176 110944194 TACATGTACTTGCCCTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rnf185 ENSMUSG00000020448 ENSMUST00000064364,ENSMUST00000077078,ENSMUST00000110026 1 3 3 203 11 3326671 3328894 TACATCAGTGGTTGGAGAC 58 3319955 3319974 CATCTCCAAATCCAAATCCT 57 NA DesignRelaxed Mus musculus 50 Patz1 ENSMUSG00000020453 ENSMUST00000110043,ENSMUST00000057089,ENSMUST00000093402 1 3 7 81 11 3193333 3199041 CTCACAAGTGTCAGACCTG 59 3199086 3199104 ACCTTGTCTTCATGACAGG 59 NA Mus musculus 50 Gria1 ENSMUSG00000020524 ENSMUST00000094179,ENSMUST00000036315 3 2 2 80 11 57051641 57056255 GAGCTAGTCTATGGAAGAGC 59 57056298 57056316 GGAGAAGTCGATGACTTCC 59 NA Mus musculus 50 Lpin1 ENSMUSG00000020593 ENSMUST00000048538,ENSMUST00000067124,ENSMUST00000111067 2 3 3 87 12 16583812 16583830 AACACATCTGAGGATGAGG 58 16580581 16583761 TAGGAAGAGTTCTGCTTCC 58 NA Mus musculus 50 MGI:2653358 ENSMUSG00000020653 ENSMUST00000020982 3 1 1 81 12 25338668 25339721 CAACTCTGTGTATAACTCCTCC 59 25339760 25339781 TTAACTACTTGGGAAGGAACAG 59 NA Mus musculus 50 Mfsd11 ENSMUSG00000020818 ENSMUST00000106365,ENSMUST00000021173,ENSMUST00000106363 2 3 3 85 11 116734685 116735104 TTTGTTCAGTCAATCTGCG 58 116735152 116735171 AATATCACCATGACCAGGAG 58 NA Mus musculus 50 Alkbh1 ENSMUSG00000021041 ENSMUST00000091090 1 1 1 72 12 88784630 88784648 GTCATCGACTTCTCAGAGG 59 88784576 88784594 ACTCCTCCTTTCCTACCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Serpina1f ENSMUSG00000021081 ENSMUST00000021490 3 1 1 88 12 104930216 104931611 CTGGAATGCCAAACTTGAC 59 104930146 104930164 GTACCTTGATTGTCATGCC 58 NA Mus musculus 50 Mpp5 ENSMUSG00000021112 ENSMUST00000082024 3 1 1 83 12 79933391 79933409 ATCATCTTCATTGCACCAC 58 79933456 79938456 TAATTCTTCAGGCTTTGGG 57 NA Mus musculus 50 8430415E04Rik ENSMUSG00000021209 ENSMUST00000021631 3 1 1 84 12 104845114 104845132 AAGTTCCACCTTAGCACAC 59 104845179 104848759 AGTTCGGAATGAGTCATCAG 59 NA Mus musculus 50 Hsp90aa1 ENSMUSG00000021270 ENSMUST00000021698,ENSMUST00000094361 3 2 2 100 12 111932849 111932868 AGACCAAACAGAGTATTTGG 57 111932541 111932786 GTTCCTTCTCCACAAAGAG 57 NA Mus musculus 50 Mccc2 ENSMUSG00000021646 ENSMUST00000022148,ENSMUST00000091326,ENSMUST00000109383 3 3 3 81 13 100733817 100733835 GTCATTGCTAGAATCGTGG 58 100730923 100733773 GAGCAAATCCTGTAACTAGG 57 NA Mus musculus 50 Btf3 ENSMUSG00000021660 ENSMUST00000022163 1 1 1 80 13 99083701 99086196 ATTGGTGGGAAAGGAACTG 59 99083639 99083659 GAACTGCAGTTTCTTATCGTC 59 NA Nonspecific Mus musculus 50 Trim23 ENSMUSG00000021712 ENSMUST00000022225,ENSMUST00000069187,ENSMUST00000069174 2 3 4 80 13 104990262 104991318 GCTAACAAACAGGATGTAGC 58 104991359 104991379 TCCACAGCATAGTTTATGGAG 59 NA Mus musculus 50 BC055107 ENSMUSG00000021750 ENSMUST00000036070 3 1 1 237 14 9133579 9133597 GTGAGCTGCTTATGAACCA 59 9131256 9131274 CGGACTTTGATGAACTCAG 58 NA DesignNoJunction Mus musculus 50 Sftpa1 ENSMUSG00000021789 ENSMUST00000022314 3 1 1 154 14 41946993 41947365 AAACAATGGGAGTCCTCAG 59 41947483 41947501 GTTCTCCTCAGGATTCCTC 58 NA Mus musculus 50 Epb4.9 ENSMUSG00000022099 ENSMUST00000022695,ENSMUST00000110984,ENSMUST00000022694 3 3 3 80 14 71013155 71013173 AAGAGGAAGACGATGACTC 58 71012571 71013112 TGGAAGTAACCTTACTGAGC 59 NA Mus musculus 50 2610206B13Rik ENSMUSG00000022120 ENSMUST00000022716 2 1 1 80 14 104909567 104909588 AAGAATAATAGCCAGTGTCCAG 59 104907237 104909528 ACTCGTTCCTCCAATAATCTC 59 NA Mus musculus 50 A1bg ENSMUSG00000022347 ENSMUST00000096418 2 1 1 83 15 60751480 60751690 AAGATGTATGCCTCACAGG 59 60751415 60751434 GGTCTCATATGTCTTCTGGG 59 NA Mus musculus 50 8230402K04Rik ENSMUSG00000022357 ENSMUST00000022985 1 1 1 80 15 58153588 58153606 AGTGAAGGACCAAAGACTC 58 58147877 58153546 ATGTGGTAAACCTGGATAAGG 59 NA Mus musculus 50 Pp11r ENSMUSG00000022468 ENSMUST00000100249,ENSMUST00000023105 1 2 2 82 15 97550106 97550558 TGATCATGAGGGTTTCTCC 58 97550042 97550060 CTACCCTGTAGATGGTCTC 57 NA Mus musculus 50 Runx1 ENSMUSG00000022952 ENSMUST00000023673,ENSMUST00000046015,ENSMUST00000113956,ENSMUST00000113957 3 4 4 75 16 92689243 92689261 GAGATTCAACGACCTCAGG 59 92669023 92669041 TGTAAAGACGGTGATGGTC 59 NA DesignNoJunction Mus musculus 50 Slc4a8 ENSMUSG00000023032 ENSMUST00000023776 1 1 1 84 15 100618606 100618624 CTCAGTCAGCTACAAACCT 58 100618672 100619454 AAGTGAAGATCCACCTTGC 59 NA Mus musculus 50 Pcdhgc5 ENSMUSG00000023036 ENSMUST00000066140 1 1 9 125 18 37977621 37984676 TTCTCTATGGGCTAGAGCA 59 37992950 37992968 TATCAAACTGGTTGTTGGG 57 NA DesignNoJunction Mus musculus 50 Polh ENSMUSG00000023953 ENSMUST00000024749 1 1 1 80 17 46327608 46327626 TGGAAGAAATGAGAGCAGC 59 46325070 46327564 TTGCCAGGACCTTATTGTG 59 NA Mus musculus 50 Fbxl17 ENSMUSG00000023965 ENSMUST00000024761,ENSMUST00000112840,ENSMUST00000112839 1 3 3 80 17 63429901 63574382 CTGATTATGCACTGATAGCCA 59 63429841 63429862 CTGTGATTTCTTTACACCATCC 59 NA Mus musculus 50 Wdr4 ENSMUSG00000024037 ENSMUST00000024837 1 1 1 177 17 31636011 31636029 GATGTTGTGTTTGAGGAGG 58 31633862 31635449 TACCAACAGAACCTTCCAG 58 NA Mus musculus 50 Myo7b ENSMUSG00000024388 ENSMUST00000025251 3 1 1 80 18 32143556 32143574 GAGAAAGTGTTTGGCTTCC 58 32143381 32143513 TACTTCCAGATCCTCAAAGC 59 NA Mus musculus 50 Aqp4 ENSMUSG00000024411 ENSMUST00000079081,ENSMUST00000115856 3 2 2 88 18 15556651 15556670 AACGAACTGATGTTACTGGT 59 15556151 15556602 GGCTCCAGTATAATTGATTGC 59 NA Mus musculus 50 Srfbp1 ENSMUSG00000024528 ENSMUST00000025406 2 1 1 121 18 52635301 52635319 AAACTTGTCAGGAGTGTCG 59 52636018 52643297 GGTTTCAATTCCTTCATGGC 59 NA Mus musculus 50 Txnl1 ENSMUSG00000024583 ENSMUST00000025476 3 1 1 91 18 63836592 63836610 AATGAAAGTGATGAGCACG 58 63835154 63836537 ACAGTAATAAGGAGCTGCT 57 NA Mus musculus 50 Fads3 ENSMUSG00000024664 ENSMUST00000025566 2 1 1 108 19 10128825 10129100 GAGTCATCTGTGGAGTATGG 59 10129611 10129629 CAAAGTTCACCAAGGTGAG 58 NA Mus musculus 50 Ms4a6b ENSMUSG00000024677 ENSMUST00000025580 3 1 1 86 19 11603093 11603111 TATGTTGGAACTTGGCCTG 59 11603160 11603991 AGGAACATAACATTCCCAGG 59 NA Mus musculus 50 Eif3a ENSMUSG00000024991 ENSMUST00000025955 2 1 1 80 19 60857831 60857850 AGAAGAGTCCCAACAAATGG 59 60857403 60857790 ACTGCACTTAAGAGAACACTC 59 NA Mus musculus 50 5430427O19Rik ENSMUSG00000025058 ENSMUST00000113976,ENSMUST00000026038 2 2 2 60 X 83133931 83133952 CAAGTGTCTAAAGAGAAGAACC 58 83133971 83133991 GGTGGCTAATAACTATGTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Bbs4 ENSMUSG00000025235 ENSMUST00000026265 3 1 1 80 9 59188944 59188963 AACTCTTTCAGACATGTGCT 59 59187680 59188903 CCAGAAGAAACAAAGATCTGG 58 NA Mus musculus 50 Crisp1 ENSMUSG00000025431 ENSMUST00000026498 2 1 1 81 17 40431449 40435110 GCTATGCACCAATAGTTGTG 59 40431387 40431406 TTCATGTTCACAGGATAGCA 59 NA Mus musculus 50 Tnrc6c ENSMUSG00000025571 ENSMUST00000026658,ENSMUST00000106344 2 2 2 89 11 117617410 117619258 CAAGAGTGGAGGTAAGCTG 59 117619311 117619329 CACAGCTCATGAGACAGAG 59 NA Mus musculus 50 Casp8 ENSMUSG00000026029 ENSMUST00000027189 2 1 1 80 1 58901625 58901643 GATCCTGTGAATGGAACCT 58 58901685 58903481 AAGAATGTCATCTCCTTGAGG 59 NA Mus musculus 50 Xpr1 ENSMUSG00000026469 ENSMUST00000086173 2 1 4 61 1 157179511 157187435 TTCACTGATGCAGAGAAGC 59 157179468 157179487 AGCTCATTCTGAAGTGTAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Smyd2 ENSMUSG00000026603 ENSMUST00000027897 1 1 1 80 1 191715327 191715345 TGAACTGTAATGGCTTCAC 57 191712783 191715283 TCATCAATGCAACATCAGG 58 NA Mus musculus 50 Plxna2 ENSMUSG00000026640 ENSMUST00000027952 2 1 1 80 1 196626100 196626699 CGAGTATAAGACTCTGATCCT 57 196626739 196626759 CAGTTTAGTACTTTCACTGGG 58 NA Mus musculus 50 4933434I06Rik ENSMUSG00000026679 ENSMUST00000027992 3 1 1 63 2 21110926 21115905 AAAGGATTATGGCATCACG 57 21110881 21110899 TTGTGCTTTCTTCACATCC 58 NA DesignNoJunction Mus musculus 50 Prkcq ENSMUSG00000026778 ENSMUST00000114853,ENSMUST00000102970,ENSMUST00000028118 1 3 3 80 2 11154292 11154310 CAACCGTGGAACTCTACTC 59 11154354 11157660 GAGGTTTCAGCTCTAACCA 58 NA Mus musculus 50 Gpd2 ENSMUSG00000026827 ENSMUST00000112618,ENSMUST00000028167 2 2 2 80 2 57156884 57158225 GGATGTTGAGCAGTATAGGA 58 57158268 57158286 GCTGATAAATGAGGAGCGA 59 NA Mus musculus 50 Ccdc34 ENSMUSG00000027160 ENSMUST00000111032 1 1 2 78 2 109862150 109862171 GCTACAACAGAAATTTCTGGAG 59 110012636 110012654 CTCAGAGCAAGTCACAGTC 59 NA DesignNoJunction Mus musculus 50 Hipk3 ENSMUSG00000027177 ENSMUST00000111124,ENSMUST00000111125,ENSMUST00000028600 2 3 3 80 2 104279436 104279455 TCCAATTGAGACTCTGAACC 59 104278153 104279393 CAGGACTTTACATGGTTGC 58 NA Mus musculus 50 4930525F21Rik ENSMUSG00000027209 ENSMUST00000110446,ENSMUST00000110448,ENSMUST00000110444,ENSMUST00000028638 2 4 4 84 2 125833026 125833044 CTAAAGAACCCAAGAGCGT 59 125829717 125832978 TATAGTGGGAAGGCTTGGT 59 NA Mus musculus 50 D2Ertd750e ENSMUSG00000027331 ENSMUST00000028803,ENSMUST00000110842 2 2 2 90 2 118644611 118649166 AGAAACAGCTACAAACCGT 59 118649220 118649238 GTAACTGCTTGTTGACAGC 59 NA Mus musculus 50 Adra1d ENSMUSG00000027335 ENSMUST00000103184,ENSMUST00000028810 3 2 2 62 2 131387566 131387584 CAACCTTCTCGTCATCCTC 59 131387522 131387541 AAATAGTTGGTGACCGTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Atp9a ENSMUSG00000027546 ENSMUST00000109177,ENSMUST00000109176,ENSMUST00000109171,ENSMUST00000029060,ENSMUST00000109175,ENSMUST00000109170 3 6 6 84 2 168463196 168464579 ATCTATCAAGGGAGCACCA 59 168463130 168463148 ATGTGAAGGAGATTGCCAC 59 NA Nonspecific Mus musculus 50 Dhx35 ENSMUSG00000027655 ENSMUST00000109478,ENSMUST00000029186,ENSMUST00000109476 1 3 3 80 2 158652144 158653647 ACCTACAAAGTCCTGTTCC 58 158653691 158653709 CTCCATCTCCTTCTGTCTG 58 NA Mus musculus 50 Rab33b ENSMUSG00000027739 ENSMUST00000054387,ENSMUST00000116342 2 2 2 74 3 51288497 51297290 ATCAAGATCCAGTTGTGGG 59 51297328 51297346 ATTCCTGTAGTAGTGCTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Map3k7 ENSMUSG00000028284 ENSMUST00000037607,ENSMUST00000080933,ENSMUST00000108184,ENSMUST00000108183 1 4 4 80 4 32065442 32066720 TTGTATAATGTGCTGCATGG 58 32066763 32066781 GGAACACTGTAAACACCAG 58 NA Mus musculus 50 Tnfsf8 ENSMUSG00000028362 ENSMUST00000030047 1 1 1 80 4 63495527 63498102 TACCTCCAAGTGTCAAAGC 59 63495465 63495483 CTGGTATATGAGTCCGTGG 58 NA Mus musculus 50 Jak1 ENSMUSG00000028530 ENSMUST00000102781 1 1 1 84 4 100854545 100856956 TATCTGTTTGCACAGGGAC 59 100854479 100854497 TATCATGTCCGTCTTGCTC 59 NA Mus musculus 50 Eif4g3 ENSMUSG00000028760 ENSMUST00000058133,ENSMUST00000084214,ENSMUST00000105832,ENSMUST00000084215,ENSMUST00000105831,ENSMUST00000105830,ENSMUST00000105829 1 7 7 128 4 137652831 137653163 GTACTGCATACCACAGTACC 59 137653254 137653272 TAAGCATTAGCGAAGTCCC 59 NA Mus musculus 50 4930555I21Rik ENSMUSG00000028801 ENSMUST00000063707 2 1 1 95 4 135075349 135081344 CATTACAATGCCTCCATCG 58 135081403 135081421 CGAGGGTATGAATCCTCTC 58 NA Mus musculus 50 Ppp2r2c ENSMUSG00000029120 ENSMUST00000031003 1 1 1 80 5 37340817 37340835 TCTGTTCCCTGTATGAGAG 57 37340879 37343603 CTGTCATGATGACACTGTC 57 NA Mus musculus 50 Gnrhr ENSMUSG00000029255 ENSMUST00000031172 3 1 2 81 5 86614342 86614360 CATGCTAATCTGCAATGCC 59 86611429 86614298 CTGATTCAGCTGTAGTTTGC 59 NA Mus musculus 50 4921520G13Rik ENSMUSG00000029607 ENSMUST00000079624 3 1 2 142 5 144654494 144655392 TGTCATGTAAGCAGACACAG 59 144652680 144652698 CATCAGGTGAAGGGTAGTG 59 NA DesignNoJunction Mus musculus 50 Gcc1 ENSMUSG00000029708 ENSMUST00000064377 3 1 2 100 6 28369295 28370297 AGAAATGAGGAAGACAGCC 59 28369213 28369231 ATACCTCAGAGATCTGGCT 59 NA Mus musculus 50 Tpk1 ENSMUSG00000029735 ENSMUST00000067888,ENSMUST00000114644,ENSMUST00000114643 1 3 3 64 6 43561366 43615759 GGGAACTTGAAATACTGCCT 59 43561321 43561339 CAAAGATGGCGAAATCGTG 59 NA DesignNoJunction Mus musculus 50 Ccdc136 ENSMUSG00000029769 ENSMUST00000096084 1 1 2 234 6 29367578 29367949 GCACTTTGAGGAAACAGTG 59 29368147 29369113 CAGTTCTTTGATCTCGCAC 58 NA DesignRelaxed Mus musculus 50 Stra8 ENSMUSG00000029848 ENSMUST00000031876,ENSMUST00000114999 3 2 2 110 6 34877892 34877910 CCAGTCTGATATCACAGCC 59 34880428 34880892 TTGAAGGATGCTTTGAGCT 59 NA Mus musculus 50 Foxp1 ENSMUSG00000030067 ENSMUST00000092485 2 1 10 153 6 98965443 98965461 TTCAACTTCTCCAACAGCA 59 98959940 98959960 GAATTGTTAGGAGGTTGGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Aldh1l1 ENSMUSG00000030088 ENSMUST00000113522,ENSMUST00000032175 1 2 2 82 6 90526759 90527783 GTGATAAGATCCAGGGTGC 59 90527829 90527847 AACAGGTTCCTTCTTGGTC 59 NA Mus musculus 50 Slc6a6 ENSMUSG00000030096 ENSMUST00000032185 3 1 1 87 6 91700289 91700307 TATTGAGGACATGATTGGC 57 91700357 91702289 GAAACATCCAACACAAAGAG 57 NA Mus musculus 50 Slco1b2 ENSMUSG00000030236 ENSMUST00000042812,ENSMUST00000087577 2 2 2 82 6 141605443 141606036 TTCCATGTACTTAGGTACTCTG 58 141606078 141606097 GCTTAGCAAACACAGATGAC 59 NA Mus musculus 50 Etnk1 ENSMUSG00000030275 ENSMUST00000032413 3 1 1 84 6 143129298 143129319 ACTGTGCTATGAGTTTATCCAG 59 143129364 143133108 CTGACGAGCTATTAGCCTG 59 NA Mus musculus 50 Thumpd1 ENSMUSG00000030942 ENSMUST00000033236 2 1 1 87 7 126860576 126861547 AAGAGTTGGCAGGAATAGTG 59 126860508 126860526 ATGATTTCCACTACCACCG 59 NA Mus musculus 50 Gp2 ENSMUSG00000030954 ENSMUST00000079898,ENSMUST00000033255 2 2 2 80 7 126598152 126600685 AATACATCAAGGTTATGGGAGG 59 126598093 126598111 CCAGAACTTGGAGAGTCAG 59 NA Mus musculus 50 Uros ENSMUSG00000030979 ENSMUST00000106144 1 1 4 97 7 140884332 140889363 ATATTTGCTCAAATGGCCTC 58 140884254 140884272 AGGTAAGAACTGAGATGCG 59 NA Mus musculus 50 Tktl1 ENSMUSG00000031397 ENSMUST00000010127 3 1 1 80 X 71446082 71447877 GGGTATCTACTGGTGATGAC 58 71447920 71447938 CAACACAATTGGGAATTGC 58 NA Mus musculus 50 Indol1 ENSMUSG00000031549 ENSMUST00000033953 3 1 1 86 8 25644421 25645628 ATTGCAAGGAAAGTGTTGG 58 25644353 25644371 CTACGTGGAGATCTTCCAG 58 NA Mus musculus 50 Adam5 ENSMUSG00000031554 ENSMUST00000050300,ENSMUST00000110653 2 2 2 80 8 25920545 25921174 ATACTTACTGGCATTTGAGGAG 59 25920486 25920504 GCATTGTACTCCAGTTTGC 59 NA Mus musculus 50 Rfx1 ENSMUSG00000031706 ENSMUST00000005600 1 1 1 121 8 86619382 86619400 GTACTACCTGATCGAGCAC 59 86619561 86619704 CTTCTTCATCTTTGTCAGGGT 59 NA Mus musculus 50 1700012B09Rik ENSMUSG00000031927 ENSMUST00000060330 3 1 1 110 9 14566131 14566149 TAGAAGGAATCTCCCTGTG 57 14562890 14566059 CCATCTTATCTTCTCAGTCCT 58 NA InUTR Mus musculus 50 Egln1 ENSMUSG00000031987 ENSMUST00000034469 2 1 1 81 8 127439609 127439628 ATAACCCAAATGGAGATGGA 58 127438040 127439565 ATACCTCCACTTACCTTGG 57 NA Mus musculus 50 Slc37a4 ENSMUSG00000032114 ENSMUST00000034624 3 1 1 83 9 44210224 44210242 CATAGCCAATGAGAGTGCA 59 44210289 44210397 AGAAATCCACCCACATTGG 59 NA Mus musculus 50 Muc16 ENSMUSG00000032134 ENSMUST00000034653 2 1 1 82 9 18302268 18303009 CTTTGTGGATGGGTATTCTC 57 18301893 18301912 AGATGAGAATGATAGCCCAG 58 NA Mus musculus 50 BC003885 ENSMUSG00000032215 ENSMUST00000034738,ENSMUST00000113505 3 2 2 119 9 72962704 72962722 TTCTGCAAATCCAAGTGTC 58 72962805 72964228 TTCAAATGAGTTGTCCACC 57 NA Nonspecific Mus musculus 50 Irak1bp1 ENSMUSG00000032251 ENSMUST00000113245,ENSMUST00000034783 1 2 2 107 9 82731088 82739924 GAGGTCTGCATTACATTTACTG 59 82739992 82740010 GTGATAGAACTCAGGTGGG 59 NA DesignNoJunction Mus musculus 50 Bckdhb ENSMUSG00000032263 ENSMUST00000116537,ENSMUST00000034801,ENSMUST00000113206 2 3 3 112 9 83962796 84015859 CAGGAAGAATGTTTCTTGAACC 59 84015931 84015950 TAGCACTTCCATTTGTCTGG 59 NA DesignNoJunction Mus musculus 50 Trim42 ENSMUSG00000032451 ENSMUST00000035026 3 1 1 196 9 97266184 97266202 GAGAAGATTTGCATCCACC 58 97264110 97266025 TCAATTTCATATCGGACTGC 58 NA Mus musculus 50 Cck ENSMUSG00000032532 ENSMUST00000060307 3 1 2 281 9 121403641 121404724 CATCCAAAGCCATGAAGAG 58 121402593 121402611 TTAATCCAGCTCTACTGGT 57 NA DesignNoJunction, InUTR Mus musculus 50 Ccdc88a ENSMUSG00000032740 ENSMUST00000040182,ENSMUST00000101427 3 2 2 151 11 29377449 29380499 AGAAAGAAACAATGCTACGC 59 29380613 29380631 TCTGAAGCGTGGTATTCTG 59 NA Mus musculus 50 Adra2a ENSMUSG00000033717 ENSMUST00000036700 3 1 1 60 19 54121334 54121352 GTATGTCATCTCCTCGTCC 58 54121376 54121394 GACCAGGATCATGATGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 AK129128 ENSMUSG00000033991 ENSMUST00000091466 2 1 1 80 13 76294757 76294776 TACTCAATAACACTCAGCCA 58 76294817 76310778 CTTTGTCCTTAAGTGAAGCAG 59 NA Mus musculus 50 Arhgap27 ENSMUSG00000034255 ENSMUST00000107024,ENSMUST00000041385 1 2 4 80 11 103199702 103200011 AGAGACTTCGGAAGAAACAC 59 103199641 103199661 TCTTTGAGTCCTTGAAGAAGG 59 NA Mus musculus 50 Kdelc2 ENSMUSG00000034487 ENSMUST00000037853 3 1 1 93 9 53206045 53206063 GAAGATTGCGAAAGAAGGG 58 53206119 53207800 GGCATATTTCTGCAGTACTC 58 NA Mus musculus 50 C630004H02Rik ENSMUSG00000034586 ENSMUST00000044152,ENSMUST00000106542,ENSMUST00000106541 2 3 3 88 11 115217729 115217945 GATGATGCTGATCCTCCAG 59 115216729 115216748 TTGAGGATGAACTGGAAGTC 59 NA Mus musculus 50 2310014H01Rik ENSMUSG00000034595 ENSMUST00000038030 3 1 2 86 17 36005722 36010681 CACAAACAGCTCAAGATCTC 58 36010730 36010748 TAGATCCTCCAGTACCGAG 59 NA Mus musculus 50 Plvap ENSMUSG00000034845 ENSMUST00000048452 2 1 1 92 8 74032427 74032445 CTATAATCGCTTCATCGCC 58 74032197 74032371 AAGAGTAAAGCTTCGCAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Tmem106a ENSMUSG00000034947 ENSMUST00000100403,ENSMUST00000107194,ENSMUST00000039581 3 3 3 126 11 101445052 101445071 CTTTGTGACTTGTCCTACCT 59 101445821 101447568 GAACACAAAGAGCTTCGTG 59 NA Mus musculus 50 Zbtb7a ENSMUSG00000035011 ENSMUST00000048128 2 1 1 116 10 80607948 80610718 AGTTCGATTCACCAGACAG 59 80610797 80610816 TTCTTCAGGTCGTAGTTGTG 59 NA Mus musculus 50 Ncapd3 ENSMUSG00000035024 ENSMUST00000086198,ENSMUST00000073127 1 2 2 80 9 26877297 26877315 AGCCATAGTAGAGAAGCGA 59 26877358 26877469 GATGATGGTAAGTGATCCGA 58 NA Mus musculus 50 Oma1 ENSMUSG00000035069 ENSMUST00000035780 1 1 1 82 4 102994456 102997627 GACCTGGAATATGAAGTATGGA 59 102997670 102997688 TCTTTCACAGTCAGGTAGC 58 NA Mus musculus 50 Myo1d ENSMUSG00000035441 ENSMUST00000041065,ENSMUST00000070997 1 2 2 80 11 80493610 80495894 CTTTCTATCAGCTCCTCCA 58 80493548 80493567 AGTTGTAGGATGAGAGTGAC 58 NA Mus musculus 50 Tgfbi ENSMUSG00000035493 ENSMUST00000045173 2 1 1 81 13 56731120 56731139 TCTCCAACAAAGACATCCTG 59 56731183 56731914 AGTGTCTTGGCTGAATCTG 59 NA Mus musculus 50 Rnf38 ENSMUSG00000035696 ENSMUST00000045793,ENSMUST00000102934,ENSMUST00000098098,ENSMUST00000107836 3 4 4 84 4 44150477 44150496 GTAGTAGATACCGATCCCAG 58 44147832 44150430 ACTGGAAGCATTGATAGCA 58 NA Mus musculus 50 Rbm43 ENSMUSG00000036249 ENSMUST00000102768,ENSMUST00000102767,ENSMUST00000039138 3 3 3 61 2 51781436 51782201 GGTCTTCAACTATGTGATGG 57 51781394 51781412 CTAGCTCAATTTGAGTGCG 58 NA DesignNoJunction Mus musculus 50 March1 ENSMUSG00000036469 ENSMUST00000110258,ENSMUST00000110255,ENSMUST00000110259,ENSMUST00000098708,ENSMUST00000072482 3 5 7 117 8 68910408 68942722 GACATCTGCAGGATCTGTC 59 68942803 68942821 TCTTGATCCATTGGTGGAG 58 NA Nonspecific Mus musculus 50 Upf3b ENSMUSG00000036572 ENSMUST00000076265,ENSMUST00000115219 3 2 3 97 X 34642127 34644437 GACTATCGAGGATGATCCAG 58 34642049 34642067 TTTCCTCCAGCAATGTCTC 59 NA Mus musculus 50 Ttc7 ENSMUSG00000036918 ENSMUST00000041110 3 1 2 164 17 87692308 87706275 TTGTCATCAAAGGCCTCTC 59 87708071 87708090 TTGATGTGCTGTTGTTTGAG 59 NA Mus musculus 50 Paip2 ENSMUSG00000037058 ENSMUST00000115737,ENSMUST00000115736,ENSMUST00000041314,ENSMUST00000115735,ENSMUST00000115734 1 5 5 84 18 35773088 35773106 ATGGACCAAATCCAAGACC 59 35773154 35775868 TCAGATTGCTCTTGACCAC 59 NA Mus musculus 50 Hook3 ENSMUSG00000037234 ENSMUST00000037182 2 1 1 80 8 27178373 27178393 GAGATTCTCTGAAGGAAACCA 59 27171910 27178331 GCATTAACCCTTGAGTGGT 59 NA Mus musculus 50 Clic4 ENSMUSG00000037242 ENSMUST00000037099 3 1 1 62 4 134781970 134781990 CGGATGTGAATAAGATTGAGG 58 134779475 134781946 GCTTTAGGTACTTGGGTGG 59 NA DesignRelaxed Mus musculus 50 Tbc1d2b ENSMUSG00000037410 ENSMUST00000041767 3 1 1 80 9 90117329 90118286 GATGGCTAAGTACTCTAGCC 59 90117268 90117287 GTCTTCATTTCTTGGAGCAG 58 NA Mus musculus 50 Ccdc21 ENSMUSG00000037443 ENSMUST00000040271,ENSMUST00000068986 2 2 2 80 4 133728776 133728794 TGTCTCAGGTAACTGATGG 58 133723343 133728732 AATCACATTGGAACCTGGT 59 NA InUTR Mus musculus 50 Prkci ENSMUSG00000037643 ENSMUST00000046401,ENSMUST00000108249 2 2 2 81 3 30940443 30942622 AAGATTATGGCTTCAGCGT 59 30942666 30942685 ATATCAAACGGAGACCTTCC 59 NA Mus musculus 50 Inf2 ENSMUSG00000037679 ENSMUST00000101029,ENSMUST00000039111 2 2 2 80 12 113844544 113845189 CAGAGAAGCATGAGATTGAG 58 113845232 113845250 GAACATAGAACTGGTCAGC 57 NA Mus musculus 50 Adh4 ENSMUSG00000037797 ENSMUST00000013458 1 1 1 83 3 138082224 138082242 TAGTCCTTGGTCATGAGTG 58 138082289 138083603 GGATTACTTTGTCACCTGG 57 NA Mus musculus 50 Fbxw17 ENSMUSG00000037816 ENSMUST00000046974 3 1 1 100 13 50522062 50522080 ATTTCCTCACTCCTCTGTG 58 50522144 50526921 GAGTGTAGAACACCTTTGG 57 NA Mus musculus 50 Nhedc2 ENSMUSG00000037994 ENSMUST00000051849 3 1 1 86 3 134981412 134984855 GTGATAACGAACGGTACCA 59 134984904 134984923 CAGATTTCCTCCAGGAAGAC 59 NA Mus musculus 50 Tapbpl ENSMUSG00000038213 ENSMUST00000043422 3 1 1 83 6 125180624 125180642 GAAGGCATCACAGATTTCC 58 125180422 125180577 CTGTACCAAGTCCACTGAG 59 NA Mus musculus 50 Cep250 ENSMUSG00000038241 ENSMUST00000109619,ENSMUST00000039994,ENSMUST00000109618,ENSMUST00000094421 1 4 4 81 2 155789466 155789484 CTGGGAGAGTGTAGAAGAG 58 155789529 155789861 CACTAGACTCTCACACCTC 58 NA Mus musculus 50 Usp5 ENSMUSG00000038429 ENSMUST00000047510 1 1 1 80 6 124767731 124767749 GTGTGACCACCATAGTCTC 59 124767474 124767688 GCTCTAAGCTATTGTTCGTG 58 NA Mus musculus 50 Dsel ENSMUSG00000038702 ENSMUST00000035462 2 1 1 60 1 113756679 113756697 TTGTAGATGCTTGTGAGTG 57 113756637 113756655 CGAAGAAGATGAAAGTGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nexn ENSMUSG00000039103 ENSMUST00000046045 1 1 1 80 3 151915820 151915838 CAGAATTGAGCAGGATCTG 57 151912652 151915777 TTTATGTCCTCAATCTGCTC 57 NA Mus musculus 50 Mycbpap ENSMUSG00000039110 ENSMUST00000093945,ENSMUST00000040692 1 2 2 80 11 94365475 94366201 CCTATACCAGATGTGTCTGC 59 94365414 94365434 AGAAGATTTCTTAGCCACAGG 59 NA Mus musculus 50 Whrn ENSMUSG00000039137 ENSMUST00000102867,ENSMUST00000107393,ENSMUST00000084510,ENSMUST00000063650,ENSMUST00000107391,ENSMUST00000095038,ENSMUST00000107388,ENSMUST00000095037,ENSMUST00000107386 2 9 11 81 4 63080504 63080523 CATTAGACCTGGAAGGAACC 59 63079643 63080462 GATTTGACATCATCCACAGAC 59 NA Mus musculus 50 Tsga10ip ENSMUSG00000039330 ENSMUST00000044527 2 1 1 255 19 5391012 5394300 CAAACTAGAGGAGCTAAGGC 59 5390179 5390197 TCTAAGTGATCGGTTGCTC 59 NA DesignNoJunction Mus musculus 50 Mrpl12 ENSMUSG00000039640 ENSMUST00000043627 3 1 1 103 11 120346642 120346663 GATAATGCTCCCAAAGAATACC 58 120346726 120346971 TTCTTCAGGAGTTCGTTGAG 59 NA DesignNoJunction Mus musculus 50 Erg ENSMUSG00000040732 ENSMUST00000113848,ENSMUST00000113846,ENSMUST00000113845,ENSMUST00000077773 2 4 4 109 16 95611647 95631354 TGAATGGTTCCAGGAACTC 59 95611556 95611574 CTTCTCCTCCATGTAGCTG 59 NA Mus musculus 50 A630054L15Rik ENSMUSG00000040818 ENSMUST00000037585 3 1 1 80 14 27448224 27448923 AATAAGTTGTTGCAGGCTG 58 27448967 27448985 TGCATCTATATGTGTCCGT 58 NA Mus musculus 50 OTTMUSG00000002987 ENSMUSG00000040838 ENSMUST00000055467 3 1 1 80 11 104585912 104587976 CACTCAAACTGAAAGTGGA 57 104588019 104588038 TCATAGTCAGGAAAGTTGTG 57 NA Mus musculus 50 Wdr25 ENSMUSG00000040877 ENSMUST00000047115 3 1 1 84 12 110263334 110264630 GATCTTCCATGAGAGGTACAC 59 110264675 110264694 GTAGTTGCCATTGGTTTGTG 59 NA Mus musculus 50 Tcl1 ENSMUSG00000041359 ENSMUST00000101071 3 1 2 81 12 106455908 106456884 CCTGTACCATATCAAGGTCC 59 106455846 106455867 GAACATAAGTACCAACATCTCC 58 NA Mus musculus 50 Pyhin1 ENSMUSG00000043263 ENSMUST00000056071,ENSMUST00000116489 1 2 2 300 1 175567549 175567567 TGCAAGATCAGTACGACAG 59 175569129 175571149 GATAACTGAGCAACCTGTG 58 NA DesignRelaxed Mus musculus 50 Olfr868 ENSMUSG00000044106 ENSMUST00000050227 2 1 1 60 9 19905385 19905404 CCGATGTATTTCTTCCTCTC 57 19905426 19905445 CTGTTGTAGAAATGAAGCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Il20rb ENSMUSG00000044244 ENSMUST00000098458,ENSMUST00000112879 2 2 3 110 9 100361869 100361887 TGTACTACTCTCCGTCTGG 59 100359629 100359647 CTGATCAGCTTCTGAGACG 59 NA DesignNoJunction Mus musculus 50 Olfr1112 ENSMUSG00000044487 ENSMUST00000053050 3 1 1 60 2 87032332 87032353 CATATAGGGTTCACATACTGGA 58 87032372 87032392 GATTCAGCTGATTTGATCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp488 ENSMUSG00000044519 ENSMUST00000052871 1 1 1 60 14 34783784 34783802 GACATCCCATATTGGGCTC 59 34783742 34783761 GCAATTTCCAGAAATCACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ankrd34b ENSMUSG00000045034 ENSMUST00000061594 3 1 1 123 13 93197151 93197169 CTTCCCAGACACTTTGGAG 59 93198805 93202758 GACTTGCAGGTCTACTCTG 59 NA InUTR Mus musculus 50 Lcn6 ENSMUSG00000045684 ENSMUST00000114199,ENSMUST00000114198,ENSMUST00000114197 1 3 4 118 2 25536329 25536466 GTTGTACAGTCGGACAGAG 59 25536548 25536779 CACAAGTGAGGTCCTTCTG 59 NA Mus musculus 50 B230358A15Rik ENSMUSG00000045802 ENSMUST00000059003 1 1 1 80 X 93510336 93515633 AGATGATGGAGAACACCCT 59 93510274 93510294 GTCAAATCCAACTGAATGGTC 59 NA Mus musculus 50 Pcdhb8 ENSMUSG00000045876 ENSMUST00000051163 2 1 1 60 18 37517160 37517180 TCCCAGAGTTACCATTATGAG 58 37517202 37517220 ACTTGAAATCTGAGGTCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sdpr ENSMUSG00000045954 ENSMUST00000051572 2 1 1 70 1 51346649 51346667 GAGACTGGAGAACAACCAC 59 51346700 51357499 TTTCTTCCTGGAAGATGAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fut10 ENSMUSG00000046152 ENSMUST00000110527 3 1 2 86 8 32311967 32370380 CTATTCTACGGGCTTACCA 58 32370430 32370448 GATGAGAAGGTGAACAAGG 57 NA InUTR Mus musculus 50 C230012O17Rik ENSMUSG00000046219 ENSMUST00000108207 3 1 2 60 4 24889886 24889904 ATTCTGATCGCCATGACTG 59 24889844 24889862 CAGGTCTACACGAACTCTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Pnma3 ENSMUSG00000046287 ENSMUST00000060418 1 1 1 60 X 70311017 70311036 GAAAGAATGTGAACCAGACC 58 70311059 70311077 TTTGCAGAAAGGATAGCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ermp1 ENSMUSG00000046324 ENSMUST00000054083 2 1 1 82 19 29705912 29706888 CATTCCAGGAATAGACTTAGCT 59 29705851 29705869 CTATGAGAATCCTGTCCGC 59 NA Mus musculus 50 5730590G19Rik ENSMUSG00000046591 ENSMUST00000035977 1 1 1 80 7 86835818 86835838 GCTCCTTCTATTCTGTATCTC 57 86835880 86836716 CTCTTTGTTCTGACTCCTG 57 NA Mus musculus 50 Rhoj ENSMUSG00000046768 ENSMUST00000055390 2 1 1 91 12 76492748 76492766 CTTACCACAACGTTCAGGA 59 76492821 76494964 GAGATCAATCTGGGTTCCG 59 NA Mus musculus 50 Zfp787 ENSMUSG00000046792 ENSMUST00000094870 1 1 1 84 7 6094714 6094732 GAGAAGAAGCTTGGTCTCC 59 6084758 6094666 ATGATGAGGATGTCCACTG 58 NA Nonspecific Mus musculus 50 Tmem164 ENSMUSG00000047045 ENSMUST00000112891,ENSMUST00000112892 2 2 9 169 X 139205524 139205543 TGTTGAATGGAGCTCTTCTG 59 139267142 139268743 AATTCACTTCGGTGACCAG 59 NA Mus musculus 50 Gap43 ENSMUSG00000047261 ENSMUST00000102817 2 1 1 199 16 42292083 42292101 GCTACCACTGATAACTCCC 59 42249218 42291920 TCTACAGCGTCTTTCTCCT 59 NA Mus musculus 50 Gm1027 ENSMUSG00000047502 ENSMUST00000106770,ENSMUST00000094928 3 2 2 80 4 106356610 106362832 TTGCAAGTATCTTGTGAGCT 59 106356549 106356568 CGTGAATTCTTGGCATACTC 58 NA Mus musculus 50 Insc ENSMUSG00000048782 ENSMUST00000106620,ENSMUST00000060351 2 2 2 81 7 121972711 121978276 CCCTTATCAAACTGTGCCA 59 121978320 121978339 AAGAAGGTGATATTGGCGAG 59 NA Mus musculus 50 Tceal1 ENSMUSG00000049536 ENSMUST00000055104 1 1 1 60 X 133243668 133243686 GCTTCAAAGAAAGACTGGC 59 133243710 133243728 TTTCTGCCATGAATGTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 4932442E05Rik ENSMUSG00000050709 ENSMUST00000059966 1 1 1 60 10 118298351 118298369 TTTACAACATGGAAGCCGT 59 118298392 118298411 TAACCAGCCTACTCATTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Vwc2 ENSMUSG00000050830 ENSMUST00000109681,ENSMUST00000056344 3 2 2 162 11 11016598 11054172 GAGGAGTTTGTGGTGTCTC 59 11161374 11161392 TTTCTGCAAAGCAGTTTGG 59 NA Mus musculus 50 Rpusd3 ENSMUSG00000051169 ENSMUST00000113092 3 1 1 175 6 113366903 113367150 GAATGACGTTGATCTTGCAG 59 113366405 113366423 GTAGAGCCATGTGTACCTG 59 NA Nonspecific Mus musculus 50 1100001G20Rik ENSMUSG00000051748 ENSMUST00000070832 3 1 1 94 11 83562792 83562811 TCAGTATTGGATGCAGTCAC 59 83566028 83566046 TTTCTTGGTCACAGAGCTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Krtap8-2 ENSMUSG00000051802 ENSMUST00000053460 3 1 1 70 16 88896550 88896568 TACGGATATGGATCTGGCT 59 88896498 88896519 CCATATCCTCCATAATAAAGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Xkr4 ENSMUSG00000051951 ENSMUST00000070533 3 1 1 144 1 3411793 3411812 TACAGACTCACAGCTTACAG 58 3206935 3206953 ATGATGACAGCCATGTAGC 59 NA DesignNoJunction Mus musculus 50 OTTMUSG00000018617 ENSMUSG00000052188 ENSMUST00000063955 3 1 1 225 19 6531953 6531971 GAGGAGAATGAGGATGCAG 59 6531161 6531179 AATTGAACCGATTTGGGTG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 1700109F18Rik ENSMUSG00000052371 ENSMUST00000064205 3 1 1 60 2 74550491 74550510 CCAAGGGACATACTTTAGGG 59 74550450 74550468 GCGTTATTCAAGAACCTGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 B4galt3 ENSMUSG00000052423 ENSMUST00000064272,ENSMUST00000111313 3 2 2 120 1 173201497 173201849 GAACACAGAAATCCCTTCAC 58 173201932 173201950 AGATACATCATCACTGCCA 58 NA InUTR Mus musculus 50 Robo2 ENSMUSG00000052516 ENSMUST00000114262,ENSMUST00000064435,ENSMUST00000089242 2 3 4 190 16 74352800 74352818 AAATGCATCTCTGGAAGTG 57 74046178 74047034 CACCACGGATACTTATTCTC 57 NA Mus musculus 50 Pcdh15 ENSMUSG00000052613 ENSMUST00000105430,ENSMUST00000105428,ENSMUST00000105427,ENSMUST00000105426,ENSMUST00000105425,ENSMUST00000092420,ENSMUST00000105424,ENSMUST00000064562,ENSMUST00000105423,ENSMUST00000105429 3 10 10 81 10 73787228 73788808 CACCTTTCTGATAACAGCG 58 73788852 73788871 ATCATTTGCATCCATCACTC 58 NA Mus musculus 50 Nfib ENSMUSG00000052757 ENSMUST00000064785 1 1 1 97 4 81938475 81938493 TTTAGAGACTGGACTCGAG 57 81938396 81938417 CAAGAACCTGTGAAATATCTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ier2 ENSMUSG00000053560 ENSMUST00000060427 1 1 1 60 8 87186628 87186646 AAGTACAGAAAGAAGCGCA 59 87186586 87186604 CGAGAGTGGTACATCTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000053739 ENSMUSG00000053739 ENSMUST00000066340 3 1 1 61 10 57716867 57716886 CTCTGATCCTTCAGGAACAG 59 57716825 57716843 CAGAAGGAATTTGGTCCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lgals4 ENSMUSG00000053964 ENSMUST00000066723,ENSMUST00000015291 2 2 2 85 7 29626251 29626270 CTTTATGAATGGCTCTTGGG 58 29626315 29626515 GGATTGACAGATCAAAGAACTG 59 NA Mus musculus 50 Tceal5 ENSMUSG00000054034 ENSMUST00000066819 3 1 1 173 X 132736976 132738308 CAGGTCTTCAAGTCTGTGG 59 132736250 132736269 TCTTCTGTACTTCCTTCGTC 58 NA DesignNoJunction, InUTR Mus musculus 50 Nkx2-4 ENSMUSG00000054160 ENSMUST00000067020 1 1 1 261 2 146910211 146910634 TCAATCTCCAGGTTCATGG 58 146909968 146909986 GGAACCAGATCTTGACCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000055370 ENSMUSG00000055370 ENSMUST00000068934 2 1 1 117 16 43348680 43355559 AGCTAACTGCTATTTAGGACAC 59 43348584 43348602 AAATCCATCCTCAGGTGTG 59 NA InUTR Mus musculus 50 ENSMUSG00000056023 ENSMUSG00000056023 ENSMUST00000069880 2 1 1 61 3 81726231 81726250 AAGGACATATACTCATTCGC 57 81726189 81726207 ATGAGCCAGCAATATTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Trim34 ENSMUSG00000056144 ENSMUST00000060315,ENSMUST00000106848,ENSMUST00000106849,ENSMUST00000106847,ENSMUST00000072555 2 5 8 80 7 111483859 111483877 ATTCCAAGCTCCTGATCTG 59 111484180 111484581 GTGAAGTTGTCCCAGTAGG 59 NA Mus musculus 50 OTTMUSG00000007191 ENSMUSG00000056411 ENSMUST00000070502 3 1 1 279 3 107889470 107889488 GAATCAATTAGGGATCCGG 57 107889731 107889749 ACTGATGAGGAAACTGACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tug1 ENSMUSG00000056579 ENSMUST00000070776 3 1 1 117 11 3544814 3544832 AAGGCTTCAACCAGATTCC 59 3543123 3543142 TCAAAGAACTTCAAGAGCAC 58 NA DesignNoJunction, InUTR Mus musculus 50 Vmn2r107 ENSMUSG00000056910 ENSMUST00000042090 2 1 1 80 17 20494908 20497298 TTTCAGAGATCCCTCAGTC 57 20497341 20497360 AGATAGCCTTATTCTCCAGG 57 NA Mus musculus 50 V1rh15 ENSMUSG00000057209 ENSMUST00000072369 3 1 1 60 13 22271196 22271217 GGTTGTAAGGTCATTGTTTACC 59 22271157 22271175 TGCTAGTGCAAATGGAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ankrd29 ENSMUSG00000057766 ENSMUST00000080906 3 1 1 96 18 12413202 12419452 GAGAAACAAGGCCAATGAG 58 12413124 12413143 AAGTTCATTCTTCCCAGGTC 59 NA Mus musculus 50 Olfr822 ENSMUSG00000058251 ENSMUST00000080460 3 1 1 60 10 129512001 129512019 CACAACTCCACTTCTTCAG 57 129512040 129512061 GAATGCAATTGTCTCTATGAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Abce1 ENSMUSG00000058355 ENSMUST00000080536 2 1 1 81 8 82211451 82211570 GTCAAACGTTTCATTCTCCA 58 82211389 82211407 GATCTGCTAGATAGGTGGC 58 NA Mus musculus 50 Olfr846 ENSMUSG00000058692 ENSMUST00000078774 2 1 1 96 9 19164938 19164956 TCCCTCAAATGTTGAACCC 59 19164860 19164878 CAGGGAAGTCTTGATTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 A630033E08Rik ENSMUSG00000059142 ENSMUST00000088696 1 1 2 93 17 22998703 22998721 ATATTATCCTGGTGGCAGC 59 22994329 22998477 GAATGTTAACAGTTCCTGGG 58 NA InUTR Mus musculus 50 Olfr426 ENSMUSG00000059371 ENSMUST00000080831 1 1 1 60 1 176029670 176029688 TCTTCATCCTTCTGCTCTG 58 176029712 176029730 AAGAAGATCACAGCATCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr887 ENSMUSG00000059942 ENSMUST00000074681 2 1 1 60 9 37893099 37893117 GTATCCATTCTGCAGAGGG 59 37893141 37893159 GCTATTACATGAGAGCCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Myl1 ENSMUSG00000061816 ENSMUST00000027151 1 1 2 127 1 66976895 66980829 CAACAGGAGGACTTCAAGG 59 66976786 66976804 TTCTTGACCTCTGCATTGG 59 NA Mus musculus 50 BC031441 ENSMUSG00000062101 ENSMUST00000056147 1 1 1 158 17 56080677 56080695 AAGAAGAATGGGCTTTGCT 59 56079406 56080361 AGTTGATACACCTTCCATGTC 59 NA Mus musculus 50 Rai1 ENSMUSG00000062115 ENSMUST00000064190,ENSMUST00000064882,ENSMUST00000102688 3 3 4 64 11 60007494 60007512 ATGTATCCACACCTACCAC 58 60011295 60011314 AATTCTCCTCAATGAACGTG 58 NA DesignNoJunction Mus musculus 50 Olfr943 ENSMUSG00000062149 ENSMUST00000071617 1 1 1 60 9 38992281 38992299 AAATCAGATGTGATCAGCC 57 38992323 38992341 AACATGCAAGCTTCAAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp780b ENSMUSG00000063047 ENSMUST00000081618,ENSMUST00000080175 2 2 2 75 7 28756684 28756702 CTAGAGCAGGAGAAAGAGC 59 28749874 28756645 AATCTGTCTCCAAGTCTGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Parp10 ENSMUSG00000063268 ENSMUST00000075689 1 1 1 81 15 76073540 76073559 GAGGACTTCTATTGAGCTGG 59 76073401 76073496 AAGACCCTCTTTGCATCTG 59 NA Mus musculus 50 Hnrnpr ENSMUSG00000066037 ENSMUST00000105850,ENSMUST00000084219 2 2 3 80 4 135870103 135870121 CAAGACACTGATAGAGGCA 58 135870164 135872288 TAAGCTACCAATCCTGTCTG 58 NA Mus musculus 50 6030445D17Rik ENSMUSG00000066178 ENSMUST00000084593 1 1 1 225 4 136018173 136018191 GTTCCAAGGACTGTCTCAC 59 136018380 136018398 TTTCTCTGCGTTTCCTGAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rplp0 ENSMUSG00000067274 ENSMUST00000086519 2 1 1 82 5 116011247 116011353 AAATTCTGAGTGATGTGCAG 58 116011398 116011416 GATGTTCAGCATGTTCAGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Htatsf1 ENSMUSG00000067873 ENSMUST00000088652,ENSMUST00000114751 2 2 2 83 X 54307304 54307322 CATTCTTTGGGACAACCAC 58 54307369 54308686 ATCTTCGGTGATCTTAGGG 58 NA Mus musculus 50 Rex2 ENSMUSG00000067919 ENSMUST00000073676 2 1 4 96 4 146431855 146431873 ATGCTTTACCCAAACTTCC 57 146431933 146431955 ATTTGTCAGGCATTTGTCG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 V1rc13 ENSMUSG00000068425 ENSMUST00000089829 1 1 1 69 6 66726382 66726402 CTGGGTGGACTTTATTATGTC 58 66726333 66726351 AACAGTAAGCATGACTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr742 ENSMUSG00000068431 ENSMUST00000089836 3 1 1 62 14 51135096 51135114 CCTGGAGATCTGGTATGTC 58 51135140 51135158 GTGTCTGAAAGGAAGTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 C330011K17Rik ENSMUSG00000069206 ENSMUST00000075255 2 1 2 81 13 67544262 67549766 ATTCCTCCAGGAACAACAG 59 67544199 67544219 TCTGGCATTGCATACTTAGAG 59 NA Mus musculus 50 EG574403 ENSMUSG00000069911 ENSMUST00000093192 3 1 1 135 11 34303263 34303281 ATGTGATTCAGGATCTGGA 57 34304350 34319736 CGGAAATCATACTCTACACTG 57 NA Mus musculus 50 mmu-mir-489 ENSMUSG00000070107 ENSMUST00000093599 1 1 1 60 6 3671971 3671990 CAGCTTGGTTGTCATATGTG 59 3671930 3671949 ATATGTGGTGTCATTCTGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr658 ENSMUSG00000070421 ENSMUST00000106817,ENSMUST00000089296 1 2 2 60 7 111793264 111793283 TTTATGGTCTGATGGTTGCT 59 111793223 111793241 GAGATTGTGATGCACAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC080695 ENSMUSG00000070618 ENSMUST00000061196,ENSMUST00000105774 1 2 2 166 4 143161190 143161686 ATTTCACCCAAGAAAGAGGA 58 143161815 143161833 TTAAACGTCTCCTCAGTGC 59 NA Mus musculus 50 Cntnap5a ENSMUSG00000070695 ENSMUST00000043725,ENSMUST00000094621 1 2 2 80 1 118343316 118351579 TGCAGGAAAGAAATTTCAGC 59 118351622 118351640 CTTGGTCACTGGATATGGT 58 NA Mus musculus 50 ENSMUSG00000070816 ENSMUSG00000070816 ENSMUST00000094828 2 1 1 60 7 13687765 13687784 AAACAAGAAATATGGGAGCC 58 13687724 13687743 ATCATGAGTGATGATAAGGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Oog1 ENSMUSG00000071216 ENSMUST00000095509 1 1 1 80 12 88948301 88948954 TGAAAGAATACCTCAGGTGC 59 88948997 88949015 CCAAGTCTGACTGTGAGAG 59 NA Nonspecific Mus musculus 50 NP_001104589.1 ENSMUSG00000071470 ENSMUST00000095932 2 1 1 91 14 51411708 51411726 AATATCACTATCGCCAGCC 59 51409675 51411654 TTTGAGTTATTCCCTGGTGG 59 NA Mus musculus 50 A530040E14Rik ENSMUSG00000072109 ENSMUST00000093501 3 1 1 130 1 85103255 85103768 TCCTTGGAGATCAATAGAGC 58 85103858 85108078 GGGTGAAGGTTATCTTTAACTG 58 NA InUTR Mus musculus 50 Cphx ENSMUSG00000072678 ENSMUST00000061593 2 1 1 94 14 26771519 26771537 AAGAATTTGCATACGCTCC 58 26771595 26774374 AAACCAGTTGTCAATCACG 58 NA Mus musculus 50 ENSMUSG00000072936 ENSMUSG00000072936 ENSMUST00000101200 1 1 1 168 5 54741294 54741312 TTTCAGCCTTGAAGAGTGG 59 54743784 54746324 TTCTTGTAGCTCCTTCACC 58 NA InUTR Mus musculus 50 EG636104 ENSMUSG00000073077 ENSMUST00000101410 2 1 1 80 X 76755851 76757996 AATGAAATGGCAAGAGTGAG 58 76755790 76755809 GATGATCTGTTCAACCACAC 58 NA Mus musculus 50 Zfp449 ENSMUSG00000073176 ENSMUST00000101560,ENSMUST00000101559 1 2 2 120 X 53606735 53606753 GATGGAACCTGTTCAGGAG 59 53606836 53615654 TAACTGATAACCAGGGTCCA 59 NA Mus musculus 50 MGI:99543 ENSMUSG00000073253 ENSMUST00000101652 2 1 1 60 X 29936161 29936494 ATTGGACCTTATGGAAGTACAG 59 29936122 29936140 TTCAGGATTTGCATTCCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 H2-D1 ENSMUSG00000073411 ENSMUST00000087173,ENSMUST00000078966 2 2 2 88 17 35402944 35402962 CAGAATTACACATGCCGTG 59 35403141 35403159 ATGTAAGAGTCAGTGGACG 58 NA DesignNoJunction Mus musculus 50 A430089I19Rik ENSMUSG00000073499 ENSMUST00000097479 3 1 1 80 5 94733359 94733378 TCAATTGTCTCCAGCATCTC 59 94732402 94733316 TCATCAAGCACCTGAAGAC 59 NA Nonspecific Mus musculus 50 Serpinb3b ENSMUSG00000073602 ENSMUST00000086694 1 1 1 128 1 109052083 109052101 TTAACTTCAGCTTTCTGGG 57 109051335 109051991 TGAGTTGTTCTTCAAGCTG 57 NA Mus musculus 50 ENSMUSG00000073814 ENSMUSG00000073814 ENSMUST00000098000 1 1 1 155 7 139507424 139507442 ATTCATTCCCTGCACAGTC 59 139507561 139507579 TGTTGATAGCGTGCTAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr687 ENSMUSG00000073909 ENSMUST00000098155 3 1 1 65 7 112424011 112424029 AACTGGATACTAAGCGTGC 59 112424058 112424076 ATCCCAGCAGAATGAACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr521 ENSMUSG00000073997 ENSMUST00000098263 2 1 1 60 7 106916565 106916584 AGGAACAAAGATGTCAAGTC 57 106916607 106916625 TACTCTTTGGATCCTGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Bcl2a1a ENSMUSG00000074147 ENSMUST00000098485 1 1 1 78 9 88852157 88852176 TGACTATATTTGCCTTTGGG 57 88852216 88852235 TTGTAAGCACATACATCCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Smcp ENSMUSG00000074435 ENSMUST00000098888 1 1 1 60 3 92388077 92388095 CTCTCAATCACCACAGTCC 59 92388035 92388054 GTTTGACTTCTTCTGGTTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074477 ENSMUSG00000074477 ENSMUST00000098943 1 1 1 73 8 10006890 10006908 ATCTTCTCCTTTCTCGGAG 58 10006835 10006853 CTCGTGGAATGGATGAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Vmn2r-ps105 ENSMUSG00000074834 ENSMUST00000099416 2 1 1 74 13 66455975 66455994 GCTTCAACAAGTAGAGTCTC 57 66454913 66455938 AAGGAAACCATCTGCTGAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Olfr993 ENSMUSG00000075220 ENSMUST00000099926 3 1 1 60 2 85254820 85254839 CTGGCCTTTGTTGATATCTG 58 85254779 85254799 CAAAGGTTTGTAGCATCTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000016805 ENSMUSG00000075416 ENSMUST00000100212 2 1 1 60 2 30570246 30570265 TCATTCCCTTGTTTCCTGTC 59 30570205 30570223 CAAGGATCCAGTTACCCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Crebbp ENSMUSG00000075417 ENSMUST00000100216 2 1 1 67 16 4082500 4082518 GGAAGGACTATCACCACTG 59 4082451 4082469 AAGAGGAGGACAGGAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075433 ENSMUSG00000075433 ENSMUST00000100247 2 1 1 61 15 97580978 97580996 TCACTGTTCTGACAGTTCC 59 97581021 97581039 CTAACCCTAACTCCAGGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ly6a ENSMUSG00000075602 ENSMUST00000023248 2 1 1 85 15 74826934 74826952 TTCTTGCCCATCAATTACC 57 74825895 74826885 TCCTTGTTTGAGAATCCAC 57 NA Mus musculus 50 IGKV10-96 ENSMUSG00000076527 ENSMUST00000103328 3 1 1 224 6 68582236 68582377 AGGTACCAGATGTGATATCCA 59 68582032 68582050 TAATCTGTTCCAGACCCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-70 ENSMUSG00000076547 ENSMUST00000103348 1 1 1 60 6 69218165 69218360 CAGTCATACTGTCCAGAGG 58 69218123 69218141 GATGCAGACATGATTGCTG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 IGKV6-17 ENSMUSG00000076590 ENSMUST00000103391 1 1 1 244 6 70321496 70321692 TTTCTCTGGTTGTCTGGTG 59 70321900 70321918 AAAGTGAAATCCGTCCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-12 ENSMUSG00000076691 ENSMUST00000103500 1 1 1 60 12 115854331 115854350 CTTATCTACAGCAGTCTGGG 59 115854290 115854308 CAGGACATCTTCACTGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV7D-4 ENSMUSG00000076799 ENSMUST00000103610 2 1 2 105 14 53711156 53711269 TAATCTCTAGGGTGAAGAGC 57 53711337 53711355 TTACGATCACTTGAAGTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGLC1 ENSMUSG00000076929 ENSMUST00000103741 3 1 1 64 16 19061958 19061976 AACAAGTACATGGCTAGCA 58 19061912 19061930 TAACTGCTATGCCTTTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Psme2 ENSMUSG00000078153 ENSMUST00000104958 1 1 1 102 11 48759243 48759261 GGTAATCACGTGGATCCAG 59 48759159 48759177 CTTGACAGCATTCACTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 A2A4T9_MOUSE ENSMUSG00000078262 ENSMUST00000105059 2 1 1 62 11 99647279 99647297 ATGCTCTAGTGGTTCTTGC 59 99647323 99647341 CTGGATGGTGAAGAACAGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 4921509A18Rik ENSMUSG00000078315 ENSMUST00000105110 1 1 1 60 X 75984317 75984337 CTGGAGAAGTTGTTTATGAGG 58 75984359 75984377 TTGGTATTGGAGTGTTGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 0610010B08Rik ENSMUSG00000078880 ENSMUST00000108991,ENSMUST00000108990,ENSMUST00000108989 3 3 3 80 2 176410326 176410345 ATCCTTCTCAGAAGAGTCTC 57 176410060 176410286 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 0610010B08Rik ENSMUSG00000078881 ENSMUST00000108994,ENSMUST00000108993,ENSMUST00000108992 3 3 3 80 2 176277446 176277465 ATCCTTCTCAGAAGAGTCTC 57 176277505 176277731 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 Serpinb1c ENSMUSG00000079049 ENSMUST00000021834 1 1 1 84 13 32975908 32976103 TCCGACTGAGTAAGAAAGTC 58 32975843 32975861 TTCAGGTCTGGAATGTAGC 58 NA Mus musculus 50 Gzmc ENSMUSG00000079186 ENSMUST00000015585 1 1 1 80 14 56851125 56851145 CCAAAGTTCTTACAACAGAGC 59 56850484 56851083 CCAGAATCCTCCTCAAAGG 59 NA Mus musculus 50 Atg4a ENSMUSG00000079418 ENSMUST00000112971 1 1 1 80 X 137530111 137530130 AAGATGCCACAGTCTTTAGG 59 137530171 137593280 GAGCTCATCTCCTAAGAATCC 59 NA Nonspecific Mus musculus 50 Tcfe3 ENSMUSG00000000134 ENSMUST00000115679,ENSMUST00000077680,ENSMUST00000079542,ENSMUST00000115678,ENSMUST00000115680,ENSMUST00000115677,ENSMUST00000101695 1 7 7 80 X 7343974 7344575 TACTCAAGGTTCAGACCCA 59 7344619 7344637 AGTACTGTTTGACCTGCTG 59 NA Mus musculus 50 Ins2 ENSMUSG00000000215 ENSMUST00000105933 1 1 4 81 7 149865496 149865515 GTAGGATATAGCCTCCTCTC 57 149865434 149865453 GCCATGTTGAAACAATAACC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Tcf25 ENSMUSG00000001472 ENSMUST00000108840,ENSMUST00000057934,ENSMUST00000093050 3 3 4 86 8 125905388 125905406 AAGGAAGGGCTAAACATGG 59 125905455 125906439 CACTTGCATTAGACTGTTCC 58 NA Mus musculus 50 Use1 ENSMUSG00000002395 ENSMUST00000110054,ENSMUST00000019169 1 2 3 80 8 73891952 73891970 TACATTTGCAGTCTAGGGC 59 73892452 73892757 CCTCACATTCTCCAGATGG 59 NA Mus musculus 50 Relb ENSMUSG00000002983 ENSMUST00000098754 3 1 4 80 7 20206502 20213279 GACCACAGATGACTTAGGAG 59 20205163 20205184 GTTCTCCTTAATGTATTCGTCG 58 NA Mus musculus 50 Hmgn2 ENSMUSG00000003038 ENSMUST00000102553,ENSMUST00000105893,ENSMUST00000102552 3 3 5 122 4 133522385 133522689 TTGTCTGCTAAACCTGCTC 59 133521899 133521917 ATTATTCGCATCCTTCCCG 59 NA Nonspecific Mus musculus 50 Cd44 ENSMUSG00000005087 ENSMUST00000060516 2 1 15 80 2 102693217 102693235 CCTACTGAACAGCCTACTG 59 102679618 102693174 TGCTGTACTATTAGGAGTGG 58 NA Mus musculus 50 Cic ENSMUSG00000005442 ENSMUST00000094696 3 1 2 90 7 26077257 26077276 AAGGAAGTCACTAGTTCTGG 58 26077329 26077449 CTTCTGACAGGACCTTGTC 59 NA Mus musculus 50 Elavl2 ENSMUSG00000008489 ENSMUST00000107116,ENSMUST00000008633,ENSMUST00000107124,ENSMUST00000107114 3 4 13 110 4 90920257 90920847 CTTATGGAGTGAAGAGTAGGT 58 90920167 90920186 TGTACACAAATATGCACCAG 58 NA Mus musculus 50 Optc ENSMUSG00000010311 ENSMUST00000010455,ENSMUST00000097571 3 2 2 82 1 135794964 135794982 CAACAACATGCTGGATTCC 59 135794529 135794921 TGGTCTCGATCATGTTATTCTG 59 NA Mus musculus 50 Pabpc4 ENSMUSG00000011257 ENSMUST00000106243,ENSMUST00000106241,ENSMUST00000080178,ENSMUST00000078734,ENSMUST00000094192 1 5 6 80 4 122967570 122968120 TCAGCCAGTTTGGTAAGAC 59 122968164 122968182 AACTTACAAAGCCAAAGCC 58 NA Nonspecific Mus musculus 50 Mtmr1 ENSMUSG00000015214 ENSMUST00000114595 1 1 8 81 X 68623037 68623056 TTCAGGTTCAGTGACATCAG 59 68630082 68632203 TTCTTCCTCTAGCTCCCTG 59 NA Mus musculus 50 Tmem27 ENSMUSG00000015401 ENSMUST00000112280,ENSMUST00000015545 2 2 3 98 X 160546365 160546386 CTGGATTATTGTATTCGGTGTG 59 160546445 160556139 CCTTTGTTGTTCCTTCTGC 59 NA Mus musculus 50 Il17rb ENSMUSG00000015966 ENSMUST00000112261 3 1 2 88 14 30816177 30816197 GTATTTCCAGCAGCTAAACAC 59 30816108 30816127 AGAATGACTGAGTGCTCTG 58 NA Mus musculus 50 Taok1 ENSMUSG00000017291 ENSMUST00000058496,ENSMUST00000017435 2 2 2 80 11 77385195 77387210 GAACACCATATTGGATGGC 58 77385133 77385153 GAGACCATACATCAACTTTGC 59 NA Mus musculus 50 Stk4 ENSMUSG00000018209 ENSMUST00000109382,ENSMUST00000018353 2 2 3 80 2 163922572 163922590 GGTCTCTGGGAATAACTGC 59 163922633 163924184 TGAATATTGCCCTCATTGGA 59 NA Mus musculus 50 Anxa6 ENSMUSG00000018340 ENSMUST00000102727 1 1 2 127 11 54799710 54804903 AAGATGCCCAGGAAATAGC 59 54798651 54798670 CTTCTTGATGAACTCCTGGA 59 NA Mus musculus 50 Ahr ENSMUSG00000019256 ENSMUST00000116436,ENSMUST00000110811,ENSMUST00000019400 2 3 3 81 12 36199793 36211368 AAGAGCTTCTTTGATGTTGC 59 36199731 36199750 CTCTGATTTGTGCTCTACAC 58 NA Mus musculus 50 Atp6v0a1 ENSMUSG00000019302 ENSMUST00000044721 1 1 4 81 11 100910783 100916350 ACGAAGTGTTTGACTTTGG 58 100916395 100916413 GTGTTGGAGATACAACCCA 59 NA Mus musculus 50 Slc6a8 ENSMUSG00000019558 ENSMUST00000033752,ENSMUST00000114464 1 2 4 99 X 70925323 70925341 TTTCCAAAGGGAGATCTCC 58 70925404 70925482 GTACATTCCACCCTTACCC 59 NA Mus musculus 50 Lims1 ENSMUSG00000019920 ENSMUST00000020078,ENSMUST00000020077,ENSMUST00000105468 2 3 3 80 10 57879418 57881153 ATAGAAGGTGATGTGGTCTC 58 57881196 57881214 GAGTTTGGTATTGCAGGTG 58 NA Mus musculus 50 Cnot2 ENSMUSG00000020166 ENSMUST00000020374 2 1 5 106 10 115964895 115964913 TTCTATGTTCCCACATCGG 59 115947505 115954382 TCAGAAATCTTTGTTGCCC 58 NA Mus musculus 50 Pofut2 ENSMUSG00000020260 ENSMUST00000020493 3 1 2 124 10 76725211 76725229 TACGTCCTACAAGGTTACG 58 76725316 76726018 AACCAGCCTCTGTAATACTC 58 NA Nonspecific Mus musculus 50 Ccdc139 ENSMUSG00000020280 ENSMUST00000020520,ENSMUST00000109525,ENSMUST00000058163 1 3 4 80 11 23606932 23607526 AGATTGCCATTTCCTAGGT 58 23608759 23608777 GCCATTCTGGTAAATACCG 58 NA Mus musculus 50 Cpeb4 ENSMUSG00000020300 ENSMUST00000020543 1 1 4 109 11 31808861 31818807 CTCTGCTTATTAATGCAAGGAC 59 31820460 31820479 ACTATGAAGAGGTTGATCCC 58 NA Mus musculus 50 Acsl6 ENSMUSG00000020333 ENSMUST00000093106,ENSMUST00000108905,ENSMUST00000072178,ENSMUST00000094194 1 4 12 82 11 54150443 54150461 GATCTTTCCGAGACAGGAC 59 54150507 54151923 AGACAACAGACTGGATCAC 58 NA Mus musculus 50 Cnot8 ENSMUSG00000020515 ENSMUST00000020822,ENSMUST00000108843 1 2 2 80 11 57923259 57924770 TATCGCTATGGACACAGAG 58 57924811 57924832 TGATACTGGTAATCTATGGAGC 58 NA Mus musculus 50 Acaca ENSMUSG00000020532 ENSMUST00000103201,ENSMUST00000020843 2 2 2 105 11 84093917 84093935 TGCCTATGAACTCAACAGC 59 84094004 84103799 GATGTTCCCTCTGTTTGGA 59 NA Mus musculus 50 Elac2 ENSMUSG00000020549 ENSMUST00000108697 2 1 3 118 11 64805851 64805953 TCTATAGTAAGGAAGGGTCCA 58 64807744 64807762 AGTATTGCAGTCGAGTGTG 59 NA Mus musculus 50 X83328 ENSMUSG00000020610 ENSMUST00000092500,ENSMUST00000103061 3 2 3 108 11 109295971 109295989 TCACTTGGAGGAATCTGAC 58 109296061 109297885 CACCAGTGCTCTGTATCTC 59 NA Mus musculus 50 Mmp28 ENSMUSG00000020682 ENSMUST00000108137,ENSMUST00000103209,ENSMUST00000021020,ENSMUST00000100710 1 4 4 104 11 83264965 83264983 ATACTGACAGTCATGCCAC 59 83261238 83264897 ATTTGTTACCTGGCTTTGC 58 NA Mus musculus 50 Ern1 ENSMUSG00000020715 ENSMUST00000001059,ENSMUST00000106801 1 2 4 89 11 106280196 106280214 CACAGACCTCAAGTTTGAC 58 106275771 106280144 GTTTCATGGTGTCCTATGAG 57 NA Mus musculus 50 Ccdc46 ENSMUSG00000020728 ENSMUST00000106724 1 1 8 139 11 108525910 108525928 GGGAAGAAGAGAAGCAGAG 59 108526030 108669972 TTGTAAAGCCTTCTCCAGAG 59 NA Mus musculus 50 Rab37 ENSMUSG00000020732 ENSMUST00000021076 1 1 2 80 11 115018283 115018302 CTGATCCAATTCAAAGACGG 58 115018343 115019276 CACCACTTTATTCCTGAAGTC 58 NA Mus musculus 50 Acox1 ENSMUSG00000020777 ENSMUST00000066587,ENSMUST00000021129 1 2 3 80 11 116043329 116044790 GAGATGGGTCATGGAACTC 59 116043267 116043286 GTTGAGAATGAACTCTTGGG 58 NA Mus musculus 50 1110005A03Rik ENSMUSG00000020815 ENSMUST00000106370,ENSMUST00000021171 3 2 2 108 11 116710356 116710374 GTTGTAGGACTGACATGGG 59 116710445 116710541 TGCTTTCAAAGTCTTCTGGT 59 NA Mus musculus 50 Rabep1 ENSMUSG00000020817 ENSMUST00000100928 2 1 4 89 11 70748016 70748034 AAATTCAAGCGGAACAGTG 58 70748085 70748631 AAGCTAGGACTATTTCCTCCT 59 NA Mus musculus 50 Pfas ENSMUSG00000020899 ENSMUST00000021282,ENSMUST00000108668 3 2 2 83 11 68805240 68805258 TTTCAGCATATGCTGTCTG 57 68804984 68805193 AAAGCAAATGACCTTTCCC 58 NA Mus musculus 50 Trip11 ENSMUSG00000021188 ENSMUST00000110038 1 1 3 80 12 103128823 103131999 CTCAGGAGTTACGATGCTG 59 103127975 103127994 CTGATTGTCTTCAGCAAGAC 58 NA Mus musculus 50 Ylpm1 ENSMUSG00000021244 ENSMUST00000095547,ENSMUST00000101202 3 2 2 92 12 86354991 86355009 AGGAATAATGCAGAGGCAC 59 86355064 86355610 AGAGACATGGTCTGTATGTG 58 NA Mus musculus 50 Prl8a6 ENSMUSG00000021345 ENSMUST00000110355,ENSMUST00000018392,ENSMUST00000080762 2 3 3 134 13 27525036 27526034 GGATACTCACCAAGGTCTC 58 27524920 27524940 GATCTATGCAGTAGGAAAGGT 58 NA Mus musculus 50 Tcfap2a ENSMUSG00000021359 ENSMUST00000021787,ENSMUST00000080429,ENSMUST00000110193,ENSMUST00000110192 3 4 4 88 13 40814696 40816649 CACTAGTGGAAGGAGAAGC 59 40814626 40814645 AAATTCTGCTACTGCTTTGG 58 NA Mus musculus 50 Nsun2 ENSMUSG00000021595 ENSMUST00000109700,ENSMUST00000109699,ENSMUST00000022087 1 3 3 80 13 69751856 69751874 TTTAAGGAGTTGGAGGACC 58 69751918 69754305 AAGTTCTTCAGGGTACCAG 58 NA Mus musculus 50 Kif2a ENSMUSG00000021693 ENSMUST00000042181 3 1 3 101 13 107758865 107759798 TCCTTCAATTACCAGGGTG 58 107758782 107758802 TCTAAGTCATCAATCTGGCTC 59 NA Mus musculus 50 Map3k1 ENSMUSG00000021754 ENSMUST00000109267,ENSMUST00000022274 1 2 2 80 13 112547006 112547316 AAATACTTAAAGCTGGGTCC 57 112546945 112546963 TTGATTCAGCTTGGTTTCC 58 NA Mus musculus 50 Itih4 ENSMUSG00000021922 ENSMUST00000078490 1 1 2 110 14 31709949 31710722 CTCCGTTGCACAATATCCT 59 31712509 31712527 TACTTACCAGTCACCTCCA 59 NA Mus musculus 50 Ednrb ENSMUSG00000022122 ENSMUST00000022718,ENSMUST00000088530 3 2 2 81 14 104222716 104242224 TTAACACCTACAAGTTGCTC 57 104222654 104222672 GAAGCCTTCTGTATGAAGG 57 NA Mus musculus 50 1110020G09Rik ENSMUSG00000022253 ENSMUST00000100790,ENSMUST00000100789 3 2 3 123 15 9022581 9022599 TTTAACATCGAAAGAGCGC 58 9025848 9029880 TTTCATAGTAGGAAGCCCTG 58 NA Mus musculus 50 1810015C04Rik ENSMUSG00000022270 ENSMUST00000022881 1 1 4 110 15 25819275 25819293 TTCCGTCATGATTCTTGGG 59 25824892 25893990 ATGACTTCCCAGCTTTCAG 59 NA Mus musculus 50 Oxr1 ENSMUSG00000022307 ENSMUST00000110297,ENSMUST00000090096,ENSMUST00000022918,ENSMUST00000090095 1 4 4 80 15 41648742 41648760 ATGGAAGAGGTGATGTCAG 58 41648803 41651394 ATCTAGTTCTATGGGCAGTG 58 NA Mus musculus 50 E430025E21Rik ENSMUSG00000022350 ENSMUST00000022976 1 1 2 80 15 59200002 59200715 TTAAACAGATACCTCGATGACC 59 59199943 59199961 TCCATCTTCACTGAGAAGC 58 NA Mus musculus 50 Ttll1 ENSMUSG00000022442 ENSMUST00000109481,ENSMUST00000016897,ENSMUST00000109480 3 3 4 118 15 83314733 83319906 GAGATCCTGTATGACGAGG 58 83314633 83314651 ACACTTCTTCCTGAGTCTC 58 NA Mus musculus 50 Lsg1 ENSMUSG00000022538 ENSMUST00000023190 2 1 2 87 16 30581098 30581118 CAGAAGTTGATATTGACTCCC 58 30574679 30581050 GGACCACAATATCACTTCTC 57 NA Mus musculus 50 B4galt4 ENSMUSG00000022793 ENSMUST00000114712,ENSMUST00000023482 3 2 5 86 16 38757910 38757928 ACTTCAACCTCTACACCTG 58 38757977 38763198 ATTTACTGTAACGCAACCTG 58 NA Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000099527 2 1 16 123 16 91854839 91854859 AAGTCCTGCTAGTCTAAAGAG 58 91861482 91863517 ATAACCTGGGCAATTTCAG 57 NA InUTR Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000113996,ENSMUST00000113993,ENSMUST00000113983 1 3 16 81 16 91854832 91854852 CTACTGAAAGTCCTGCTAGTC 59 91854895 91863514 ACCTGGGCAATTTCTTCTC 59 NA Mus musculus 50 Bsg ENSMUSG00000023175 ENSMUST00000067036,ENSMUST00000105381 3 2 2 89 10 79172562 79172810 ACGAAGTACATAGTGGACG 58 79172863 79172881 CACATTGATCTCGCTTCTG 58 NA Mus musculus 50 Kcnk5 ENSMUSG00000023243 ENSMUST00000024011 3 1 1 62 14 20964186 20964205 GTTTCTTACCAGGAGAGGAG 59 20963991 20964009 ATGAAGATGGCTGTACACG 59 NA DesignNoJunction Mus musculus 50 Calcr ENSMUSG00000023964 ENSMUST00000075644 3 1 2 96 6 3657555 3657573 TATGTGGACAATGCAGTGG 59 3650269 3657498 CTTGCAACTTATCACTTCACTG 59 NA Mus musculus 50 Guca1a ENSMUSG00000023982 ENSMUST00000059348 1 1 1 76 17 47532085 47532103 GGAATTCACAGATACCGTG 57 47531740 47531758 CTTCCATGAACTCCTCCAG 59 NA DesignNoJunction Mus musculus 50 Bzrpl1 ENSMUSG00000023995 ENSMUST00000024794 1 1 1 69 17 48589234 48589253 ACAAGGTCATATTGCTTGTG 58 48588463 48588481 TTCCATACCAGGTAGGAGG 59 NA DesignNoJunction Mus musculus 50 Jmjd2b ENSMUSG00000024201 ENSMUST00000086835 2 1 2 91 17 56539146 56539164 ATCGTCATCACCAAGAACC 59 56539219 56540659 TCCTCAAACTCTACCTCGT 59 NA Mus musculus 50 Fkbp5 ENSMUSG00000024222 ENSMUST00000079413,ENSMUST00000114792,ENSMUST00000062167 1 3 3 80 17 28549027 28549045 GCCTAAGTTTGGCATTGAC 59 28547525 28548984 CAAGATTCTTTGGCCTTCTC 58 NA Mus musculus 50 Adcyap1 ENSMUSG00000024256 ENSMUST00000064775 1 1 1 60 17 93601671 93601690 CTTACGCCCTTTACTATCCA 58 93602136 93602154 GCTTCGTTAAGGATTTCGT 58 NA DesignNoJunction Mus musculus 50 Ccny ENSMUSG00000024286 ENSMUST00000053917,ENSMUST00000115867 1 2 2 80 18 9353496 9377803 TTCATTAACCATCATCCTCCAG 59 9353437 9353455 GACTGTGCTGTCATCTAGG 59 NA Mus musculus 50 5133400G04Rik ENSMUSG00000024352 ENSMUST00000025209,ENSMUST00000096573 3 2 2 168 18 35820223 35820458 GAAGAAACTGGTGGAGGAG 59 35819983 35820001 GACTCTGCTCTTGACACTG 59 NA Mus musculus 50 Csf1r ENSMUSG00000024621 ENSMUST00000025523,ENSMUST00000115268,ENSMUST00000115263 3 3 4 88 18 61276989 61277007 TGATGTCCTGTTCTGTGAC 59 61277059 61277196 CTTCATCACACCTATCGGT 58 NA Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000111658,ENSMUST00000111659,ENSMUST00000111653 1 3 15 159 19 55985102 55985120 CTCCATATTACCCGCTGTC 59 55987130 55991843 CTAGAGGACAGAAAGCTAGAC 59 NA Mus musculus 50 Gyk ENSMUSG00000025059 ENSMUST00000026039,ENSMUST00000069684,ENSMUST00000081161 1 3 4 138 X 82982681 82985645 TATGGCCTAATGAAAGCTGG 59 82976242 82976260 ATAAGAAGCACCCTGTTCC 59 NA Mus musculus 50 Alas2 ENSMUSG00000025270 ENSMUST00000112715 2 1 2 101 X 146986799 146986819 CCTATTTAGTATTGGACGCTG 58 146986882 146987559 CTGTCTTGGAGTTCTCCTC 58 NA Mus musculus 50 4921533L14Rik ENSMUSG00000026153 ENSMUST00000027337,ENSMUST00000097806 2 2 2 80 1 24021662 24021681 TATGTTCCTTACCATTCTGC 57 24019320 24021620 TTCGGAATAGATTTGTCCTG 57 NA Mus musculus 50 Stk16 ENSMUSG00000026201 ENSMUST00000027401 3 1 2 139 1 75209568 75209712 CACTAGCTCTTCAGGACTG 59 75210161 75210180 CATCATGGCATAAAGCACAC 59 NA Mus musculus 50 Dnajb10 ENSMUSG00000026203 ENSMUST00000116582,ENSMUST00000082158 1 2 3 193 1 75234131 75235864 TATCTGACAAGCACAAACG 58 75236194 75237474 CAAGTCATCAAAGAGCTCTG 58 NA Mus musculus 50 Atg16l1 ENSMUSG00000026289 ENSMUST00000113188 1 1 4 99 1 89682514 89682532 ATTGTCTCAGGAAGTCACG 59 89682595 89682806 AACCAAACACCATCAACAC 58 NA Mus musculus 50 Spata17 ENSMUSG00000026611 ENSMUST00000110950,ENSMUST00000027908 3 2 4 84 1 188872358 188921663 CTGACAAGGATTTCCAGAC 57 188872292 188872310 ACAATTTCTCCAGCTTTCG 58 NA Mus musculus 50 Pkn3 ENSMUSG00000026785 ENSMUST00000113692,ENSMUST00000113688,ENSMUST00000045246 1 3 3 80 2 29945686 29945859 CATTCAGAAGCTCCTCCAG 59 29945903 29945921 GGTTGAACCTTGATCTCCT 58 NA InUTR Mus musculus 50 D730039F16Rik ENSMUSG00000026870 ENSMUST00000113068,ENSMUST00000028228,ENSMUST00000047447 2 3 3 61 2 34737916 34737934 TGTCAACTGTCCCAATGAG 59 34741392 34741410 TCTTCTTATCCAGGATGGC 58 NA DesignNoJunction Mus musculus 50 Lcn5 ENSMUSG00000026937 ENSMUST00000100313,ENSMUST00000028306,ENSMUST00000100312 2 3 3 85 2 25513898 25513916 CACAAGGAGGAGAAGATGG 59 25513965 25515585 TGGCCCTCATTGTAATAGG 58 NA Mus musculus 50 Tfpi ENSMUSG00000027082 ENSMUST00000111718,ENSMUST00000028487,ENSMUST00000090732,ENSMUST00000111714,ENSMUST00000111717,ENSMUST00000111712 2 6 8 87 2 84284291 84284910 CTGTGAGAATCCAGTCCAC 59 84284222 84284242 GCGATCAGTTACAGTATTTCC 58 NA Mus musculus 50 Meis2 ENSMUSG00000027210 ENSMUST00000110907,ENSMUST00000028639,ENSMUST00000102538,ENSMUST00000110908,ENSMUST00000074285,ENSMUST00000020367,ENSMUST00000110906 2 7 7 129 2 115825885 115825903 AAATATCATGAGAGCGTGG 57 115694524 115747410 TCTGGCATTGATAAACCAG 57 NA Mus musculus 50 BC006779 ENSMUSG00000027580 ENSMUST00000029102 1 1 4 99 2 180963986 180964266 CAGGTGGTAAGTGTTAGGG 59 180963804 180963822 CTATCACATAGCGCCACTC 59 NA Mus musculus 50 Oprl1 ENSMUSG00000027584 ENSMUST00000108765 3 1 6 67 2 181450637 181451210 GTATGTCATCCTCAGCTGG 59 181453082 181453100 AGTCTTCATCTTGGTGTGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Dhx35 ENSMUSG00000027655 ENSMUST00000109478 3 1 3 83 2 158675221 158675239 TATTCGTGATGACCACGAG 59 158675285 158677461 TCATTGTAGATAACCCAGCG 59 NA Mus musculus 50 Ddx20 ENSMUSG00000027905 ENSMUST00000090680 2 1 2 80 3 105482627 105483278 CCTTCTTCCTTTACCAGATCC 59 105482567 105482585 ATGGCAGCTTTAACTTCCA 59 NA Mus musculus 50 Pip5k1a ENSMUSG00000028126 ENSMUST00000107235 1 1 3 182 3 94875847 94875865 GTCCAGCATAAAGAAGCAG 58 94869356 94874823 GAACACTGTGTTGACTGAC 58 NA Mus musculus 50 Asph ENSMUSG00000028207 ENSMUST00000084912 1 1 17 82 4 9564843 9566356 AAGAAGTTCTAGCCAAAGCA 59 9563091 9563109 ATCCGCATCATAGACTCCT 59 NA Mus musculus 50 Elavl4 ENSMUSG00000028546 ENSMUST00000106598,ENSMUST00000106601,ENSMUST00000102722,ENSMUST00000106600,ENSMUST00000106594 3 5 9 103 4 109879259 109882357 ATGGCGTAAAGAGGTTCTC 59 109879174 109879192 ATAGACGAAGATGCACCAG 59 NA Nonspecific Mus musculus 50 Ppcs ENSMUSG00000028636 ENSMUST00000030385 2 1 2 123 4 119094280 119094460 AGTCCATTAGGCTCTTCTG 58 119091889 119094193 TCATTGTTATCTGCAGTGG 57 NA Mus musculus 50 Ephb2 ENSMUSG00000028664 ENSMUST00000059287 2 1 3 156 4 136231441 136239845 ACTATGAGAAGCAGGAGCT 59 136231303 136231321 TACATCTTGCCACTGTAGC 59 NA Mus musculus 50 Zfp593 ENSMUSG00000028840 ENSMUST00000030644,ENSMUST00000116281 1 2 2 66 4 133800948 133800966 TTTCCGATCCAAAGACCAC 59 133800806 133800824 TTCTTCCTGACTGTAGGGT 59 NA DesignNoJunction Mus musculus 50 Epb4.1 ENSMUSG00000028906 ENSMUST00000105974,ENSMUST00000105979 3 2 14 116 4 131553449 131559510 GTGTTGTAGAGACATGGCT 59 131547139 131547157 CTGTTAATTGTGCTGGGTC 58 NA Mus musculus 50 Nt5c3 ENSMUSG00000029780 ENSMUST00000101367,ENSMUST00000031793,ENSMUST00000116607 1 3 3 81 6 56838393 56839465 CGAAGAAAGTTACTGCAGC 59 56838330 56838348 AAGGGAACTTCTCTTCCAC 58 NA Mus musculus 50 Rad52 ENSMUSG00000030166 ENSMUST00000112723 1 1 2 128 6 119870927 119870945 GAACCTTCAACAACCAGGA 59 119871037 119872498 CAGAGTCTTCTCTGCTACC 58 NA Mus musculus 50 Slco1b2 ENSMUSG00000030236 ENSMUST00000042812,ENSMUST00000087577 2 2 2 82 6 141605443 141606036 TTCCATGTACTTAGGTACTCTG 58 141606078 141606097 GCTTAGCAAACACAGATGAC 59 NA Mus musculus 50 Gas2 ENSMUSG00000030498 ENSMUST00000107592,ENSMUST00000051912,ENSMUST00000107591 3 3 3 175 7 59208659 59248666 CCTCTTCATCAGGATGCTG 59 59248805 59248823 GATTCATGTCCTTCAGGGT 58 NA Mus musculus 50 Anks4b ENSMUSG00000030909 ENSMUST00000033201 3 1 1 60 7 127325905 127325924 CAGAACAGCTAGAGAAGGAC 59 127325946 127325965 TCTCTGAACACTTCCATCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Acsm3 ENSMUSG00000030935 ENSMUST00000098081,ENSMUST00000106529 3 2 6 108 7 126927853 126928518 AAAGGAATGGGAACAAGGA 58 126928589 126928608 GGAGCAGTTCATACAAACAG 58 NA Mus musculus 50 9030624J02Rik ENSMUSG00000030982 ENSMUST00000059390,ENSMUST00000033280 2 2 4 201 7 125947669 125947687 CATTTGCAAGACAATGCAC 58 125953479 125955327 GTTCACACTATGGATCAACTG 58 NA DesignRelaxed Mus musculus 50 Smarca1 ENSMUSG00000031099 ENSMUST00000101616,ENSMUST00000077569,ENSMUST00000088973 2 3 6 81 X 45211481 45211500 ATTATTGTATGTGGCGTGGT 59 45207882 45211437 GCATCTATCGCTTCCTCTC 59 NA Mus musculus 50 Srpx2 ENSMUSG00000031253 ENSMUST00000113303,ENSMUST00000113304,ENSMUST00000033606 2 3 3 80 X 130460511 130460785 CTGTATGTGTAGACATAGATCC 57 130460826 130460844 CAGTTAGTTTCTCTGGCTC 57 NA Mus musculus 50 Pak3 ENSMUSG00000031284 ENSMUST00000033640,ENSMUST00000112863 2 2 6 90 X 140144284 140148450 AATTCACTCCAGATCTCTATGG 59 140149698 140149716 GAGGTTTGGAGTAGTCGTG 59 NA Mus musculus 50 4930519F16Rik ENSMUSG00000031325 ENSMUST00000033688,ENSMUST00000061184 2 2 3 80 X 100429406 100429425 TAGTACATCCCTGAAGAGCT 59 100428265 100429364 CCAAGTTTCTTGCTACTCTG 58 NA Mus musculus 50 Flna ENSMUSG00000031328 ENSMUST00000114289 3 1 7 87 X 71473088 71473434 CATGTGCCTGAAATTAGCA 58 71473019 71473037 CTCCTTCTACGATCTCTGC 58 NA Mus musculus 50 Zrsr2 ENSMUSG00000031370 ENSMUST00000112289,ENSMUST00000033736,ENSMUST00000090840 1 3 3 92 X 160395906 160395924 TAAGAAGTACTTGGCCCTC 58 160394470 160395850 TCTTTCTGTGCCAATTCTG 57 NA Mus musculus 50 Abcd1 ENSMUSG00000031378 ENSMUST00000114461,ENSMUST00000002084 3 2 2 81 X 70966420 70974328 CTATGCAGAGTCAGACTCAG 59 70974372 70974390 TTCTGTACGCTCACTAACC 59 NA Mus musculus 50 Morc4 ENSMUSG00000031434 ENSMUST00000113014 2 1 4 127 X 136392156 136392297 AATATCCGGAGCTATCTTCAG 58 136392049 136392067 GTTAAGAGCAGTGACTGCT 59 NA Mus musculus 50 Mcf2l ENSMUSG00000031442 ENSMUST00000095456 2 1 12 150 8 12880011 12880029 CAAGGAACACGTTAGAAGC 58 12880142 12963174 CATGATTTCATCTGAGGCTG 58 NA Mus musculus 50 Myst3 ENSMUSG00000031540 ENSMUST00000110696,ENSMUST00000044331 3 2 2 82 8 24024793 24024812 GAGCCAAGAAATCATGACTG 58 24024857 24029812 CAGTTACTCCGACCTTCTG 59 NA Mus musculus 50 Rbpms ENSMUSG00000031586 ENSMUST00000033994,ENSMUST00000053251,ENSMUST00000033995 3 3 3 89 8 34944835 34944853 AGAACAAACTCGTAGGGAC 58 34917311 34944782 CTGTGAGCTCATATGGCTC 59 NA Mus musculus 50 Cnot7 ENSMUSG00000031601 ENSMUST00000110472,ENSMUST00000034012,ENSMUST00000110474 3 3 4 90 8 41581257 41584656 ATCTCAAAGGTGGATTACAGG 59 41581187 41581206 GTAAGCAGTGAGTCAGATCC 59 NA Mus musculus 50 Terf2 ENSMUSG00000031921 ENSMUST00000068388,ENSMUST00000116425,ENSMUST00000095178 2 3 3 60 8 109618744 109618764 AGACTCTATGGTTGAATCCAG 58 109606952 109618725 GATACAAATAATGACAGCAGCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Cog2 ENSMUSG00000031979 ENSMUST00000034460,ENSMUST00000108803,ENSMUST00000093038 2 3 3 80 8 127056367 127056386 CAGAGTTTAACCAGCTTCAG 58 127056429 127057123 CAGCTATACGAGGTCTCAC 58 NA Mus musculus 50 Kirrel3 ENSMUSG00000032036 ENSMUST00000115148,ENSMUST00000115147 2 2 5 80 9 34831167 34831187 GACCATATACAACTGTACAGC 58 34831229 34832705 ATTTCCGAACCTTGTTCCT 59 NA Mus musculus 50 Gnb5 ENSMUSG00000032192 ENSMUST00000076889 3 1 2 111 9 75182007 75182025 CTGACATTCGACAAGAACG 58 75182100 75183467 CTGTCAGAATCTGCATGTC 58 NA Mus musculus 50 Dhx30 ENSMUSG00000032480 ENSMUST00000084965 3 1 4 93 9 109989664 109989683 CACTTGATTTGGACCTTGTG 59 109989198 109989608 ATATTGGAGTGCACTGGTG 59 NA Mus musculus 50 Dhx30 ENSMUSG00000032480 ENSMUST00000035056 3 1 4 172 9 110015515 110017543 CAAGGATTCCAGCTTTCTC 58 110001346 110011532 TTAATAGGTCCCTAGAAGCTC 58 NA Mus musculus 50 Smarcc1 ENSMUSG00000032481 ENSMUST00000035057,ENSMUST00000088716,ENSMUST00000111971,ENSMUST00000111969 1 4 5 213 9 110124458 110124476 ATATGCTGAACTACGTGCC 59 110124653 110137391 TGGTATTTGACCTGGTTGG 59 NA DesignRelaxed Mus musculus 50 Slco2a1 ENSMUSG00000032548 ENSMUST00000112818 1 1 2 105 9 102975549 102975567 TTCTCCTCAGTCATTGCTG 59 102975636 102979265 GAACTTGGTGTGCAATGAG 59 NA Mus musculus 50 Gpbp1l1 ENSMUSG00000034042 ENSMUST00000030460,ENSMUST00000054876,ENSMUST00000106475 3 3 3 80 4 116246118 116246949 GACTACGGGAGATTCTTGG 59 116246992 116247011 GCATATGCTCCCTTAGAGAC 59 NA Nonspecific Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111696,ENSMUST00000111695,ENSMUST00000111694,ENSMUST00000111678,ENSMUST00000111677,ENSMUST00000111676,ENSMUST00000111687,ENSMUST00000111685,ENSMUST00000111684,ENSMUST00000111672 1 10 23 80 2 84443394 84443412 CTTTGGAGGAAGAGTTGGA 58 84443048 84443350 GCTAAATCTTCTGCATGGG 58 NA Mus musculus 50 Brip1 ENSMUSG00000034329 ENSMUST00000064301 1 1 3 65 11 86011387 86011405 TTGTTCTGCATTAGCATGG 58 86009771 86009789 ATGGGAGTCAGTACTCCAG 59 NA DesignNoJunction Mus musculus 50 Atp5h ENSMUSG00000034566 ENSMUST00000073791,ENSMUST00000106537,ENSMUST00000043931 1 3 3 81 11 115277188 115277341 GTATGAGAAGCAGCTGGAG 59 115277125 115277145 TGGGAAGATCTCATTCAAGTC 59 NA Nonspecific Mus musculus 50 Exph5 ENSMUSG00000034584 ENSMUST00000051014 3 1 1 116 9 53175227 53175245 GTGTTTGTTCCTAAGCCAG 58 53180355 53180373 CAGCTTGTTGTCCAAATCG 59 NA DesignNoJunction Mus musculus 50 Rfpl4 ENSMUSG00000035191 ENSMUST00000045215 3 1 1 83 7 5066903 5066921 TTCTGACAATGGACCAAGG 59 5062449 5062467 AGATGATGAGGTGGTTCTG 58 NA DesignNoJunction Mus musculus 50 Prkx ENSMUSG00000035725 ENSMUST00000036333,ENSMUST00000114044 2 2 2 81 X 75027429 75027447 AACATCCTTCTAGACAGGG 57 75018564 75027384 GAGTCCATGTCCTATCCAC 58 NA Mus musculus 50 March1 ENSMUSG00000036469 ENSMUST00000110258,ENSMUST00000110259,ENSMUST00000098708,ENSMUST00000072482,ENSMUST00000110253 3 5 7 91 8 68980086 68992135 AGGTAACGACAATGGTGTG 59 68992188 68992208 CATACATGAAGACGAGACCTC 59 NA Nonspecific Mus musculus 50 Nudt1 ENSMUSG00000036639 ENSMUST00000071881,ENSMUST00000050205,ENSMUST00000110827,ENSMUST00000110826 3 4 4 135 5 140811402 140813554 AGAAAGTGAAGAAATGCGC 59 140813653 140813671 ATCCTGGAACTTGAAGTGC 59 NA Mus musculus 50 Prkcdbp ENSMUSG00000037060 ENSMUST00000047040 3 1 1 68 7 112629610 112629628 GAGAGTTCTGAAGAGGAGC 59 112629560 112629579 AACTTTCTGTAAACCAGTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Prkci ENSMUSG00000037643 ENSMUST00000046401,ENSMUST00000108249 2 2 2 81 3 30940443 30942622 AAGATTATGGCTTCAGCGT 59 30942666 30942685 ATATCAAACGGAGACCTTCC 59 NA Mus musculus 50 Wdr19 ENSMUSG00000037890 ENSMUST00000041892,ENSMUST00000113784 3 2 2 80 5 65612901 65612920 TGAATGAACCAGATAACCCG 59 65612960 65613239 CATCTCCATACCAACTATAGCA 59 NA Mus musculus 50 Aof1 ENSMUSG00000038080 ENSMUST00000037025,ENSMUST00000064564 3 2 2 95 13 47160003 47162820 TTTGGGATGAAGGTGACTG 59 47162879 47162897 TCCTCTTCCTACTACCACG 59 NA Mus musculus 50 AW551984 ENSMUSG00000038112 ENSMUST00000086047 1 1 2 81 9 39397275 39397293 AGGAATTGAAGGACGAGTG 59 39396723 39397230 GGAATAAGAGTCAGGGCTG 59 NA Mus musculus 50 Dock10 ENSMUSG00000038608 ENSMUST00000077946 2 1 3 136 1 80525230 80525249 TATTGCAGAATACCTGAAGC 57 80522894 80524814 TAGAGAACATGCTTCCTCC 58 NA Mus musculus 50 Nfe2l1 ENSMUSG00000038615 ENSMUST00000081775,ENSMUST00000107658,ENSMUST00000107655,ENSMUST00000107659,ENSMUST00000048638,ENSMUST00000107657,ENSMUST00000107656 3 7 7 98 11 96682630 96682648 CTATCTCCTCTTCTGACGG 58 96681816 96682569 ATTTACTTCCATAGCCTGCA 59 NA Mus musculus 50 4930504E06Rik ENSMUSG00000038712 ENSMUST00000107187 2 1 2 89 3 95098831 95098849 CTAAGTCATTCCCTAGGCA 58 95098902 95099206 AATAAGGTAGTCCTGGTCC 57 NA Mus musculus 50 Akap2 ENSMUSG00000038729 ENSMUST00000098066,ENSMUST00000030049,ENSMUST00000095073,ENSMUST00000043456 2 4 14 88 4 57896061 57899168 TGGATGATAGTAGTTACACCTC 58 57905758 57905776 ACTCTTCCTCCGATTAACC 58 NA Mus musculus 50 Ralgps1 ENSMUSG00000038831 ENSMUST00000113165,ENSMUST00000042615,ENSMUST00000113167,ENSMUST00000091039,ENSMUST00000113162 3 5 6 81 2 33116051 33116069 AAGAAGACAACTACAAGCG 57 33030059 33116008 AGGTAGATTCCTAGATAGGGA 58 NA Mus musculus 50 AA536717 ENSMUSG00000039599 ENSMUST00000090499,ENSMUST00000037698 1 2 5 101 14 21179128 21182492 CACACGGATATGGAAGAGG 59 21182557 21182575 TTTCATGCAGTGAAATGGC 59 NA Mus musculus 50 5730528L13Rik ENSMUSG00000039693 ENSMUST00000061135,ENSMUST00000064807,ENSMUST00000107704 3 3 4 85 4 48565639 48565657 CTGTACTTCCTTCAGAGCC 59 48573718 48573737 CGATTTGAAACAGCAAAGGA 59 NA DesignNoJunction Mus musculus 50 2410089E03Rik ENSMUSG00000039801 ENSMUST00000110617 3 1 3 81 15 8160033 8160053 GATAGCATTCTTTAGACCTGG 57 8160096 8162382 TTCTCTGAAGCAACCTAGG 58 NA Mus musculus 50 Ankrd6 ENSMUSG00000040183 ENSMUST00000084748,ENSMUST00000108168 3 2 7 167 4 32908305 32909141 CCATTGTGAACAATGCAGG 59 32904450 32904471 GACAATCTCTTCTAGCTTCCTC 59 NA Mus musculus 50 Fbxl4 ENSMUSG00000040410 ENSMUST00000039234,ENSMUST00000098235 3 2 2 80 4 22304211 22313058 CCAGCTGAAGTAAGATGGG 59 22313102 22313120 AGGTTTAAACTGACGAGCC 59 NA Mus musculus 50 Cept1 ENSMUSG00000040774 ENSMUST00000039153 2 1 2 97 3 106308762 106322936 GAACTTCACGATTCCTGTG 58 106308683 106308703 CACGGAAGTAATTTGTACAGG 58 NA Mus musculus 50 Gpr161 ENSMUSG00000040836 ENSMUST00000043164,ENSMUST00000111450 2 2 2 117 1 167241112 167247376 AACAGGATCACAGACTTGG 59 167247456 167247475 CTGAATCCTGAGAGTAGCTG 59 NA InUTR Mus musculus 50 MGI:2388655 ENSMUSG00000040865 ENSMUST00000046020,ENSMUST00000097718 3 2 2 90 1 63125630 63132257 CTGTTTCCTCATTTAGGATTGG 59 63125561 63125579 ACCATGCGACTTGATATGG 59 NA Mus musculus 50 Atp1a3 ENSMUSG00000040907 ENSMUST00000102858,ENSMUST00000080882 1 2 2 80 7 25774861 25774879 ATGTCCATGATTGACCCTC 59 25774715 25774817 CATGATGACCTTGATGCCT 59 NA Mus musculus 50 E130014J05Rik ENSMUSG00000040943 ENSMUST00000041994 1 1 2 83 3 133143133 133143151 ATATCTTGGGCAAGTGTGG 59 133139591 133142315 CAGTTTCTACTGGGTGGTG 59 NA Mus musculus 50 Mtap7d2 ENSMUSG00000041020 ENSMUST00000112471,ENSMUST00000058145,ENSMUST00000043151 3 3 5 80 X 155931002 155933970 GTCTATGGATGTGAGTCCT 57 155934013 155934032 CCAGGAATCATTTCACTCAC 58 NA Mus musculus 50 Rap1gap ENSMUSG00000041351 ENSMUST00000063471 1 1 6 97 4 137277788 137277806 CAACAAGAAACCCAACACC 59 137277865 137279673 GAATAAGCAATGATATGCCGG 59 NA Mus musculus 50 Gk5 ENSMUSG00000041440 ENSMUST00000112972,ENSMUST00000085217 1 2 2 80 9 96046096 96046114 AAGGGCAGTTGAAGAAGAC 59 96046157 96050644 TAGGAAGAACCTTTCGTGAG 59 NA Mus musculus 50 Sox5 ENSMUSG00000041540 ENSMUST00000038815,ENSMUST00000077160 1 2 4 190 6 144065164 144103519 ACACAATGGAAGTCGATGG 59 144064992 144065010 CATCTTCCTCTGCTTCAGG 59 NA Mus musculus 50 Rnf10 ENSMUSG00000041740 ENSMUST00000112097,ENSMUST00000112093,ENSMUST00000100842,ENSMUST00000040555 1 4 4 80 5 115707178 115710141 GAAGACGAGATGAGGTAGC 59 115707116 115707135 TCAGGTTGATCTTCTTAGGG 58 NA Nonspecific Mus musculus 50 Gck ENSMUSG00000041798 ENSMUST00000109822,ENSMUST00000109823 1 2 4 180 11 5811014 5814974 CTCTGGTAGAGCAGATCCT 59 5810423 5810870 AAGTCTCCAACTTCTGAGC 59 NA Mus musculus 50 Oasl1 ENSMUSG00000041827 ENSMUST00000031540,ENSMUST00000112143 3 2 2 88 5 115382895 115382914 GTATCTACTGGACCAAGCAC 59 115382965 115385939 GATGATAGGCCTTTGTCCC 59 NA Mus musculus 50 Git2 ENSMUSG00000041890 ENSMUST00000102579,ENSMUST00000112185,ENSMUST00000043283,ENSMUST00000112183 3 4 5 91 5 115195497 115195515 CAGCCAGACTATGACAGTG 59 115189277 115195443 TGGAGAGTTTGAAGCTTCTG 59 NA Mus musculus 50 Itga1 ENSMUSG00000042284 ENSMUST00000061673,ENSMUST00000036276 2 2 2 80 13 115825582 115839498 GGCAAATGGGTTCTTATTGG 59 115825521 115825541 CCCAACTGGACACTTATAGAC 59 NA Mus musculus 50 Ubap2l ENSMUSG00000042520 ENSMUST00000080538,ENSMUST00000029553 2 2 5 92 3 89806257 89806277 CCTTTATGCATATTCTGACCC 58 89804160 89806203 CGAGAGTGAGGATATCCTG 58 NA Mus musculus 50 Unc84b ENSMUSG00000042524 ENSMUST00000046259,ENSMUST00000089311 1 2 3 87 15 79558901 79558919 TGACTCTGAAGCAGAACTC 58 79558501 79558850 AACTGGGATTCCACATCAG 59 NA Mus musculus 50 Gjc2 ENSMUSG00000043448 ENSMUST00000075445,ENSMUST00000108793,ENSMUST00000069642,ENSMUST00000108790 2 4 5 60 11 58990343 58990361 TTCTTGCTGGTCATGTACG 59 58990301 58990319 CCATCTCACAGAGGTTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Wdr72 ENSMUSG00000044976 ENSMUST00000055879,ENSMUST00000098563,ENSMUST00000098564 2 3 3 94 9 73982376 73987441 CCTGAACTGAAGATTTCAGC 58 73987497 73987516 TAAGGCTGTTTGGAGAAGTC 59 NA Mus musculus 50 Sdpr ENSMUSG00000045954 ENSMUST00000051572 3 1 1 60 1 51357901 51357919 GGTCGTAAGAAAGTCCGAG 59 51357943 51357961 GGTCTTCCAACTTGGTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Clec9a ENSMUSG00000046080 ENSMUST00000058352 2 1 2 84 6 129366349 129366367 CAGATGCTTCTACTGGACC 59 129366415 129369509 CAGTCACTACCTGTTTCCT 58 NA Mus musculus 50 Dlk2 ENSMUSG00000047428 ENSMUST00000061722,ENSMUST00000113490 1 2 2 295 17 46438605 46438623 GTACCTCACAATCACCCTG 59 46439459 46439477 TATGCCATCAATGCATGTG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Gjb1 ENSMUSG00000047797 ENSMUST00000052130 2 1 1 60 X 98579901 98579919 GGTGGACCTATGTCATCAG 59 98579943 98579961 ACATACATGAAGACAGCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 1810044A24Rik ENSMUSG00000047921 ENSMUST00000089770,ENSMUST00000023276 3 2 3 80 15 72755987 72756006 TTTCACCATCAACATCAAGG 58 72734102 72755945 CTGATTCCATCATCACTCAG 57 NA Mus musculus 50 Arid4a ENSMUSG00000048118 ENSMUST00000058026,ENSMUST00000046305 3 2 3 81 12 72161054 72161072 GGAAGAGCTTGATCCTGAG 59 72161117 72162282 GTTGATCGGAGTACCTCTG 59 NA Mus musculus 50 Olfr148 ENSMUSG00000048299 ENSMUST00000050807 3 1 1 60 9 39421421 39421440 ATCTCTTACAAAGGATGTGC 57 39421462 39421481 CTTCAGTAGAACCCAGAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ppyr1 ENSMUSG00000048337 ENSMUST00000052164 2 1 1 60 14 34960321 34960340 ACCTCTGCTTGATATTTGTG 57 34960280 34960298 AGTAGGTTGGTCACATTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001013772.1 ENSMUSG00000048411 ENSMUST00000059937 3 1 1 60 1 28834439 28834458 CAAAGACTCAAATGAAGCTG 57 28834398 28834417 AATATTCTGTGTTTCTCGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 5930416I19Rik ENSMUSG00000048668 ENSMUST00000112152 2 1 3 183 6 128309362 128312083 AAGATGTAGCATGGTTTGC 58 128309197 128309216 GATTCATAGTGGTGTTTGGG 58 NA InUTR Mus musculus 50 Rpo1-4 ENSMUSG00000049553 ENSMUST00000055296 3 1 2 80 6 71926199 71927333 TTCAAGTACTCCGAGATACTG 58 71927374 71927393 CTCGATGCCATAAGTATTGG 58 NA Mus musculus 50 2010005J08Rik ENSMUSG00000049680 ENSMUST00000093362 1 1 2 84 11 5626408 5626838 AAAGGGCATTCAGATCTGG 59 5623156 5626361 ATTCCAAATCTGCAATTGCC 59 NA Mus musculus 50 4930430E16Rik ENSMUSG00000049811 ENSMUST00000109557,ENSMUST00000058269 2 2 4 182 11 22920962 22920980 AACTCTTGGCAGACATCAG 59 22921126 22923440 TTTCACTCCTTCTGATGGC 59 NA Mus musculus 50 Akap4 ENSMUSG00000050089 ENSMUST00000057101 3 1 3 116 X 6644780 6647574 ACGATGTCTGACGATATTGAC 59 6647650 6650292 CACATCCACAAAGCATATCAC 59 NA Mus musculus 50 Sstr5 ENSMUSG00000050824 ENSMUST00000051864 2 1 1 92 17 25631980 25631998 AGGCTCCTCTAACATTGTC 58 25629168 25629187 TAGGTGTGGAAGTCAAAGAG 58 NA DesignNoJunction, InUTR Mus musculus 50 Skp2 ENSMUSG00000054115 ENSMUST00000096482 1 1 2 100 15 9046690 9046708 AAGAATGACTGCTTTCCAG 57 9043616 9046629 CCAAGTTCAAGTAGAGTATCAG 57 NA Mus musculus 50 Phactr1 ENSMUSG00000054728 ENSMUST00000110161 2 1 4 82 13 43155134 43173030 AACCACTTAACAGATCCTGG 59 43173075 43173093 ACTTTCTTTGGAGGTAGCG 59 NA Mus musculus 50 Cntn1 ENSMUSG00000055022 ENSMUST00000000109,ENSMUST00000068378 1 2 2 80 15 92050896 92059059 GATATGGTCATGGAGTGTCTG 59 92059098 92059119 CTGGGTAAATGGTATTGATTGG 59 NA Mus musculus 50 BC042720 ENSMUSG00000055567 ENSMUST00000114009 3 1 5 84 1 66664833 66666006 TCAGGTTTCAGGTGATGAG 58 66666053 66666072 CCATACATCTCCTCTGTCAG 58 NA Mus musculus 50 St3gal5 ENSMUSG00000056091 ENSMUST00000069994,ENSMUST00000114112 2 2 2 85 6 72092469 72097074 GGTAATAAGGTTGAACAGTGC 59 72097121 72097139 CCTCTGGGTAAGTCATCCT 59 NA Mus musculus 50 Ttc26 ENSMUSG00000056832 ENSMUST00000039394,ENSMUST00000076585 3 2 2 120 6 38332195 38332213 CGCCATTACCCTATTGGAG 59 38335513 38337605 TTCATATTCCTCCAAAGCTCTC 59 NA Mus musculus 50 Cep110 ENSMUSG00000057110 ENSMUST00000028237,ENSMUST00000113034,ENSMUST00000113032 2 3 7 80 2 35023398 35024769 GCAGCTACAAGGTAAACAG 58 35024813 35024831 TTTGCTAGGTCCAAATGGT 59 NA Mus musculus 50 Npm1 ENSMUSG00000057113 ENSMUST00000101375 2 1 4 167 11 33056094 33056672 AGATCAAAGGGTCAAGAGTC 59 33055375 33055393 ATTCCAATCCATTTGTGGC 58 NA Mus musculus 50 Ryr3 ENSMUSG00000057378 ENSMUST00000091818 1 1 3 83 2 112590946 112590964 AGAGAAAGAAATGGTGGCC 59 112573174 112573590 GTTGAATCGTTACCAAAGAGTG 59 NA Mus musculus 50 Gstm1 ENSMUSG00000058135 ENSMUST00000004140 1 1 2 80 3 107819297 107819315 AGACATTGTGGAGAACCAG 59 107817948 107819254 TTCTGCTTCTCAAAGTCAGG 59 NA Nonspecific Mus musculus 50 Zfp85-rs1 ENSMUSG00000058331 ENSMUST00000091525 2 1 2 66 13 67850464 67850484 ACCCTACAAATGTAAGTGTG 57 67850417 67850435 TTCTTTGATGCTTACCCAG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Nrf1 ENSMUSG00000058440 ENSMUST00000115199,ENSMUST00000069831 1 2 10 83 6 30040297 30045350 TATACTAGGTCCTGTGGGA 57 30045396 30045415 TTAGACTCAAACACATGAGG 57 NA Mus musculus 50 Zfp708 ENSMUSG00000058883 ENSMUST00000109743,ENSMUST00000109742 2 2 3 142 13 67175877 67182386 GGACCCTCTGTCATTTACAG 59 67175103 67175772 TAGAGAAAGCAAGACCCAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Lsmd1 ENSMUSG00000059278 ENSMUST00000082283 2 1 1 88 11 69209844 69209862 GAGTTCCTCAAGCCTTCTG 59 69210072 69210091 ATAGAAACGATGTGGTGTCC 59 NA DesignNoJunction Mus musculus 50 H2-K1 ENSMUSG00000061232 ENSMUST00000025181,ENSMUST00000087189,ENSMUST00000114311 1 3 4 82 17 34136724 34136742 AATGAGCAGAGTTTCCGAG 59 34136473 34136491 ACCTGAATAGTGTGAGAGC 58 NA DesignNoJunction Mus musculus 50 Mospd2 ENSMUSG00000061778 ENSMUST00000112248,ENSMUST00000112247,ENSMUST00000004715 1 3 3 80 X 161402966 161402985 ATAACGTTGTGGATGAAACC 58 161401937 161402924 CACTAAGGTCATTGACAGAG 57 NA Mus musculus 50 Ssbp3 ENSMUSG00000061887 ENSMUST00000030367,ENSMUST00000097934,ENSMUST00000072753,ENSMUST00000106761 1 4 5 128 4 106585572 106585820 TTATCAGAGATTCGATGGGA 57 106588288 106588307 TGAATGTTCACAAGTGTCTC 58 NA Mus musculus 50 Qk ENSMUSG00000062078 ENSMUST00000042296 2 1 4 181 17 10409173 10409191 ACAAATACAGACCGCTGTC 59 10408325 10409031 GCATTTCAATCCACTCTAACAC 59 NA Mus musculus 50 Ifna13 ENSMUSG00000063376 ENSMUST00000105149,ENSMUST00000072734 1 2 2 60 4 88289957 88289977 CTAGACTCATTCTGCAATGAC 58 88289917 88289935 GCATCAGACAAGCTTTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1335 ENSMUSG00000066061 ENSMUST00000084313,ENSMUST00000105035 3 2 2 60 4 118481993 118482011 GTTATCCTCAACTGGGACC 59 118481951 118481970 AGAAACCACAGATCCAAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Serpinb5 ENSMUSG00000067006 ENSMUST00000086701,ENSMUST00000112730,ENSMUST00000112729 2 3 3 81 1 108776851 108776872 GAATAAGCATCTGAGTATGCTC 58 108776913 108778189 TTGCTGTTCAATCTTCTCCA 59 NA Mus musculus 50 MGI:2442530 ENSMUSG00000067369 ENSMUST00000087540 3 1 3 136 X 130800803 130800822 TGAGTTATGAAGCACAACTC 57 130797310 130797329 TGTTTAGAACTGACCTTTCC 57 NA DesignNoJunction, InUTR Mus musculus 50 Cyp2d40 ENSMUSG00000068083 ENSMUST00000055721 1 1 1 60 15 82591597 82591615 ACTCATGATTCTGCATCCA 58 82591338 82591356 TATGACCTCGTCGATTTCC 58 NA DesignNoJunction Mus musculus 50 Macrod2 ENSMUSG00000068205 ENSMUST00000110064,ENSMUST00000078027 3 2 10 82 2 142082354 142086833 TCTCATCCACAGAGATGGT 59 142086877 142086897 CTTCATCTTTGTGGACTTCAG 58 NA Mus musculus 50 Gml ENSMUSG00000068349 ENSMUST00000096400 1 1 1 60 15 74646823 74646841 ATATCAGACGCTGTTTGAC 57 74644299 74644317 TTGTAGACATAGAGCAGCC 58 NA DesignNoJunction Mus musculus 50 Cry2 ENSMUSG00000068742 ENSMUST00000090559,ENSMUST00000111278 3 2 2 80 2 92254097 92256323 CTTGTACAAGAAGGTGAAGAG 58 92254037 92254055 GTGTAGAAGAATTCTCGCC 57 NA Mus musculus 50 OTTMUSG00000003605 ENSMUSG00000069609 ENSMUST00000092460,ENSMUST00000100240,ENSMUST00000100239 1 3 4 61 11 114894765 114894783 CAGGTGACTCAGAACTCTC 59 114882202 114882220 ATCAGCAAGAAGGAGATGC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 C87414 ENSMUSG00000070686 ENSMUST00000101024 2 1 1 79 5 94066900 94066918 AAAGATGAGGATCTGGGAC 58 94066839 94066857 ATTCTGTGATGTGCTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001074770.1 ENSMUSG00000071494 ENSMUST00000095968 1 1 1 60 6 42488763 42488781 GTTCTCTAGCTGACCTGAG 58 42488721 42488739 CCCAAGAATGAGATGGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000017637 ENSMUSG00000071708 ENSMUST00000112529,ENSMUST00000096351 3 2 2 81 X 153898341 153899119 ACTATGGTAGAGATTGACCA 57 153898279 153898299 GATTGTCTAAGACATCTCCAC 57 NA Nonspecific Mus musculus 50 2610002J02Rik ENSMUSG00000073684 ENSMUST00000105627,ENSMUST00000097747,ENSMUST00000105628,ENSMUST00000105626 1 4 4 121 4 154625047 154625065 AAATTCTGGTCGAACTCCC 59 154630248 154630266 TATCCACATCTAGCTGGGT 59 NA DesignNoJunction Mus musculus 50 Sirpb1 ENSMUSG00000074677 ENSMUST00000108352 3 1 4 88 3 15702592 15732155 AGTGAAAGAACTGAAGACGG 59 15702523 15702541 CAGTGGCAGCAATTAACAG 59 NA Nonspecific Mus musculus 50 Defb23 ENSMUSG00000074681 ENSMUST00000099206 2 1 1 60 2 152285172 152285190 ACCTGCGACAAGAAATACC 59 152285130 152285150 TTCGTTCTCATCATCTCTACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000015750 ENSMUSG00000074736 ENSMUST00000109935,ENSMUST00000109934,ENSMUST00000099263 3 3 4 97 2 149756771 149828923 CCCATGAGACAAACAAAGC 59 149828982 149829002 AATAGTAATGGACAGGACTGC 59 NA Mus musculus 50 Olfr1271 ENSMUSG00000075062 ENSMUST00000111502,ENSMUST00000099751 1 2 2 60 2 90106331 90106350 TCATCACTGACTTACTTGCT 58 90106290 90106308 ATCTGAGTTAGACAGCCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zbtb2 ENSMUSG00000075327 ENSMUST00000100078,ENSMUST00000100077 1 2 2 60 10 5971953 5971971 TGTTTGTCCATCAGACCAG 59 5976713 5976731 ATGTCAGGCTGTATGTCAG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 IGKV2-112 ENSMUSG00000076518 ENSMUST00000103319 1 1 1 60 6 68170427 68170445 TCCAATCCTGTCACTTCTG 58 68170468 68170487 GGAGACTCTTACTAGACCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-91 ENSMUSG00000076532 ENSMUST00000103333 3 1 1 61 6 68719065 68719083 GCAGATTATCAGCTTGCTG 58 68718831 68718852 GCACAATTTCTCCATTAGACAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV5-37 ENSMUSG00000076571 ENSMUST00000103372 1 1 1 60 6 69913354 69913372 GTATCAACAGTGTGAAGCC 58 69913312 69913330 GTGCTGTAACCTTGAAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sirpb1 ENSMUSG00000078781 ENSMUST00000108356 1 1 2 80 3 15542188 15542209 GAAGTCATTGAAACCCATACTG 59 15541808 15542148 ATTAGGACACTCAGACTTGG 58 NA Mus musculus 50 Sec61g ENSMUSG00000078974 ENSMUST00000109643,ENSMUST00000109642,ENSMUST00000109641 3 3 3 74 11 16406408 16406426 TAAAGGACTCAATTCGGCT 58 16404818 16404836 TAGCCATGGCAATCTTCTG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 A2APR4_MOUSE ENSMUSG00000079326 ENSMUST00000112339 3 1 1 60 X 157738856 157738875 GTTCTGATATTGAGGACACG 58 157738896 157738916 TCTTCAAGTTCAGAGTCTACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 3110007F17Rik ENSMUSG00000079450 ENSMUST00000113348,ENSMUST00000113345 1 2 4 84 X 120231145 120231165 AGTGATGTAAACCAGATCCAG 59 120236539 120256228 TATGTGGAAACCAGCAAGG 59 NA InUTR Mus musculus 50 Tbx4 ENSMUSG00000000094 ENSMUST00000108047,ENSMUST00000000096,ENSMUST00000108045 3 3 3 96 11 85725831 85727636 CTGAAGCGTAGAGACAGTG 59 85727695 85727714 AACGGAAATAGTGATCGTCC 59 NA Mus musculus 50 Gpr107 ENSMUSG00000000194 ENSMUST00000056433 3 1 1 80 2 31023726 31024328 TCTTACCTGGATGAAGATGTG 59 31024367 31024388 GATGTCTAAGATGACAAGAGTG 58 NA Mus musculus 50 Myo18a ENSMUSG00000000631 ENSMUST00000100795 3 1 10 60 11 77591877 77591897 GTAGTGTACTTAAATGGGTGC 58 77591919 77591937 CACTCGCTAAGATCTGCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Timp1 ENSMUSG00000001131 ENSMUST00000009530,ENSMUST00000115342 3 2 2 84 X 20448218 20448236 GATAGCTTCCAGTAAGGCC 59 20448284 20449916 TTTAGCCCTTATGACCAGG 58 NA Mus musculus 50 Calm1 ENSMUSG00000001175 ENSMUST00000110082,ENSMUST00000001204 2 2 2 124 12 101443922 101444318 TTGACAAGGATGGGAATGG 59 101444406 101444424 GTCGCCATCAATATCTGCT 59 NA Mus musculus 50 Kcnn1 ENSMUSG00000002908 ENSMUST00000110081,ENSMUST00000110080,ENSMUST00000110078,ENSMUST00000002987 1 4 4 80 8 73376601 73376619 CTGTGTTGTTGGTCTTCAG 58 73374627 73376557 GCTTATCGTGGTACCTCTC 59 NA Mus musculus 50 Bcl2l12 ENSMUSG00000003190 ENSMUST00000003290 3 1 1 92 7 52248150 52248168 CAGTGTTGAGCATGTACAC 58 52246787 52246805 AAGTTCAAGTCCACAGGTG 59 NA DesignNoJunction Mus musculus 50 Crot ENSMUSG00000003623 ENSMUST00000003720 1 1 1 80 5 8978283 8983701 CAGAACTTCTCAGACAATTGAC 59 8978224 8978244 TAGTTAATGCCGCTATACTGG 59 NA Mus musculus 50 Ikbkg ENSMUSG00000004221 ENSMUST00000114128,ENSMUST00000004330,ENSMUST00000114129,ENSMUST00000114133,ENSMUST00000114130,ENSMUST00000114127,ENSMUST00000064407 1 7 7 82 X 71688760 71688778 ATAAGCTGAAAGAGGAGGC 59 71688824 71689125 CTTGTAGATATCCGCCTGG 59 NA Mus musculus 50 Prkaca ENSMUSG00000005469 ENSMUST00000005606,ENSMUST00000059266 3 2 2 84 8 86518847 86519198 TATCAGAGAAAGGTGGAAGC 59 86519245 86519263 CTTCCTCCTCATAGTCGTC 58 NA Mus musculus 50 Napa ENSMUSG00000006024 ENSMUST00000006181 1 1 1 82 7 16698741 16698829 GAAGAGTCCAACAGCTCAG 59 16698875 16698893 ATAGCCTTCTGGTACTGCT 59 NA Mus musculus 50 C330007P06Rik ENSMUSG00000006423 ENSMUST00000006591,ENSMUST00000047486,ENSMUST00000115248 3 3 3 80 X 34393404 34394288 CTCCTAAGAAGGTTATGATGAC 57 34393345 34393365 CTTCATCAATGGTAGACACAG 58 NA Nonspecific Mus musculus 50 Pcdha1 ENSMUSG00000007440 ENSMUST00000047479 2 1 9 235 18 37306091 37306109 CTCAGTGACTGACAACAGG 59 37318983 37319001 TTGCACTGGATACTGTTGG 59 NA DesignNoJunction Mus musculus 50 Rplp1 ENSMUSG00000007892 ENSMUST00000008036 1 1 1 97 9 61761751 61762164 GGAGGATAAGATCAATGCCC 59 61761307 61761325 CAATGTTGACATTGGCCAG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Spib ENSMUSG00000008193 ENSMUST00000098483 1 1 3 83 7 51785348 51786606 ACTTAAGCTGTTTGGTAGGG 59 51785284 51785302 AGACTCCTTCTGGGTACTG 59 NA Mus musculus 50 Grid2ip ENSMUSG00000010825 ENSMUST00000110733 3 1 2 132 5 144124264 144124282 AAGGAGCAGGTGTTTACTG 59 144124375 144134683 GAATAAAGATCCTGAGGTTGTC 58 NA Mus musculus 50 Med16 ENSMUSG00000013833 ENSMUST00000105378,ENSMUST00000045844 1 2 2 110 10 79361844 79361959 ATAACCATGGGAAGCTCAG 59 79361752 79361770 TCACCATGCAGTATTCCAG 59 NA Mus musculus 50 Gip ENSMUSG00000014351 ENSMUST00000103157,ENSMUST00000103156 1 2 2 99 11 95887998 95888017 CATCAGTGATTACAGCATCG 58 95888079 95890012 GTTGTGTTTCCAGTCACTC 58 NA Mus musculus 50 Trappc2l ENSMUSG00000015013 ENSMUST00000015157 3 1 1 96 8 125137053 125137071 GAGAAGATCTCTGCCATGG 59 125137127 125137831 CATACCCATATACCTTGTAGTCC 59 NA Mus musculus 50 Ada ENSMUSG00000017697 ENSMUST00000017841 1 1 1 129 2 163556070 163556088 CATCGAGGATGAAGCTCTC 59 163553973 163555756 ATTCTTGAAGCGAACAACC 58 NA Mus musculus 50 Crk ENSMUSG00000017776 ENSMUST00000017920,ENSMUST00000108425 3 2 4 66 11 75506021 75506039 GAAGTATAGACCTGCCTCC 58 75516872 75516890 GTAACCTTTACCAGCTCAC 57 NA DesignNoJunction, InUTR Mus musculus 50 Kif3a ENSMUSG00000018395 ENSMUST00000057330,ENSMUST00000108954,ENSMUST00000108958 3 3 3 86 11 53392609 53392628 GTTCGAGTGTCATACTTGGA 59 53392674 53393238 TTCTTTAACCTCTAACCTCTGG 59 NA Mus musculus 50 Akap1 ENSMUSG00000018428 ENSMUST00000018572,ENSMUST00000107904,ENSMUST00000107903,ENSMUST00000107902 2 4 4 60 11 88705821 88705839 GTGATGACAACTTTGTCGC 59 88705779 88705797 GAGCTAACTGAAAGGACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Plod1 ENSMUSG00000019055 ENSMUST00000019199,ENSMUST00000105713,ENSMUST00000105712,ENSMUST00000097790 2 4 4 96 4 147305296 147305314 CAGAGGAGCATATCTACCC 58 147303749 147305236 TAACCAATGAAGCCTCCAG 59 NA Mus musculus 50 Gipc1 ENSMUSG00000019433 ENSMUST00000019577 3 1 1 120 8 86185928 86185946 CTTCATCTTTGCCCATGTG 59 86186029 86186142 CTTGATGCGCTTAATGAAGG 59 NA Mus musculus 50 Syne1 ENSMUSG00000019769 ENSMUST00000056571,ENSMUST00000095899,ENSMUST00000092721 3 3 5 82 10 5313551 5313569 AACTTCTCCTGAAGGAGGT 59 5313615 5314691 TGACAAATCCTGCTGACTG 59 NA Mus musculus 50 Pex7 ENSMUSG00000020003 ENSMUST00000020182 3 1 1 80 10 19614101 19614120 TGAGAGTGTCATTTACAGCA 58 19608553 19614058 CTCAGAGTCTGATCTCCTG 58 NA Mus musculus 50 Hsp90b1 ENSMUSG00000020048 ENSMUST00000020238 3 1 1 81 10 86157355 86158231 ATTGCTCAAGGTGATTAGGA 58 86157293 86157313 GTCGTTATACTTCTCATCAGC 58 NA Mus musculus 50 Irak3 ENSMUSG00000020227 ENSMUST00000020448 3 1 1 84 10 119583673 119602156 GTTTCCAGTGCAAACATACTC 59 119583609 119583627 CTAGATTGGGTCGGAAGTG 59 NA Mus musculus 50 Zfp607 ENSMUSG00000020420 ENSMUST00000053722 3 1 1 257 7 28647589 28647607 GTTCTCAACACATGGTCTG 58 28650681 28662796 ATAACTCCAAATCTGGGCT 58 NA DesignRelaxed Mus musculus 50 Ccdc117 ENSMUSG00000020482 ENSMUST00000020776 2 1 1 80 11 5434818 5434836 AATGGATCAGACAACTGGA 58 5434372 5434774 TCGTCAATTATCCTGTCCT 57 NA Mus musculus 50 Twistnb ENSMUSG00000020561 ENSMUST00000020877 3 1 1 147 12 34118373 34118391 TTTAGGTGTCCCTATTGCA 58 34118502 34121809 AACTGTACCCATTAACGTC 57 NA DesignRelaxed Mus musculus 50 Ccl1 ENSMUSG00000020702 ENSMUST00000108189 3 1 3 96 11 81991584 81991603 ACCTTGAAGAAAGAGCTTCC 59 81990400 81991525 TGTTCAGCCTGAATACCAC 59 NA Mus musculus 50 Galr2 ENSMUSG00000020793 ENSMUST00000055872 1 1 1 60 11 116144692 116144713 TAGTATCTTATGCCAACTCGTG 59 116144734 116144752 AAATGCTTGGAGACCAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Spata7 ENSMUSG00000021007 ENSMUST00000048402,ENSMUST00000101146,ENSMUST00000101144 3 3 3 86 12 99900223 99900241 TCCTTTACCCTCACAAGGA 59 99900291 99901386 TTACAGGATGCCCTTTCTG 59 NA Mus musculus 50 Slc17a4 ENSMUSG00000021336 ENSMUST00000021769,ENSMUST00000110406 1 2 2 91 13 23998639 24000643 TCAAGAAAGGCTTCTGCTC 59 23998566 23998585 GCTCAAGTTCATTTGTTGGG 59 NA Mus musculus 50 Ripk1 ENSMUSG00000021408 ENSMUST00000021844 2 1 1 80 13 34102560 34105128 TAAAGACCCAGATAGATGTCC 58 34105170 34105188 CATGTAAGTAGCACATGCC 58 NA Mus musculus 50 Hmbox1 ENSMUSG00000021972 ENSMUST00000022544,ENSMUST00000067843,ENSMUST00000056878 2 3 3 97 14 65480451 65506419 GGTAACAGGAATCAGTCAGAG 59 65480374 65480392 GATACCATCGGTAGAACGC 59 NA Mus musculus 50 Rcbtb2 ENSMUSG00000022106 ENSMUST00000022702,ENSMUST00000110952 1 2 2 80 14 73578305 73578323 AAGCAAGGAATCTGTGAGG 59 73578366 73582280 GAACTCTTCTAAGTCCTGGG 59 NA Mus musculus 50 4930449E01Rik ENSMUSG00000022116 ENSMUST00000022711 1 1 1 256 14 105898298 105904461 GAAGCAATCTGGAAATATGC 57 105904776 105904794 TAAGTTCTGCTTCCTTCCA 58 NA DesignNoJunction, InUTR Mus musculus 50 Cldn10a ENSMUSG00000022132 ENSMUST00000047761,ENSMUST00000071546,ENSMUST00000100314 3 3 3 253 14 119261072 119261181 ATTGTCAGGTCTGTGTTCC 59 119273450 119273469 GATACTTGGTCCGAGAAGAC 59 NA DesignRelaxed Mus musculus 50 Abcc5 ENSMUSG00000022822 ENSMUST00000079158 2 1 3 80 16 20376634 20376653 CATCTTCAACAGTGCTATCC 58 20375197 20376592 TCGACCAGATACTGTAACTG 58 NA Mus musculus 50 6330407G11Rik ENSMUSG00000023075 ENSMUST00000102636 2 1 1 238 4 123420679 123420697 CTTACTGCACCAGGTTCTC 59 123414098 123415261 CAGGATACATAGCTTGTTGG 58 NA DesignRelaxed Mus musculus 50 Thada ENSMUSG00000024251 ENSMUST00000047524,ENSMUST00000025099 2 2 2 80 17 84831718 84834905 ACAGTTCCAGGATTCTGAG 58 84831656 84831674 CAATCATAAGGCTTGGTGC 59 NA Mus musculus 50 4921528I01Rik ENSMUSG00000024306 ENSMUST00000025160,ENSMUST00000115837 2 2 2 85 18 22177531 22177552 GAGCTGAGTAAGGAAATAAGGA 59 22175986 22177485 TTGAAGAACTCTTCCTGCA 58 NA Mus musculus 50 Vps52 ENSMUSG00000024319 ENSMUST00000025178,ENSMUST00000114330 3 2 2 80 17 34097440 34098065 GCAAAGAAAGGCTTCTTCTC 59 34098108 34098126 GATGACAGTACCACGAGTG 59 NA Mus musculus 50 Npc1 ENSMUSG00000024413 ENSMUST00000025279 1 1 1 80 18 12360678 12360696 CTACGTCGTGATGTTTCTG 58 12360242 12360635 ATCTTAGAATCCACCAGGAG 58 NA Mus musculus 50 Yipf5 ENSMUSG00000024487 ENSMUST00000025364 2 1 1 196 18 40370541 40371709 CCTCTGTTAGAAGAGTTGGG 59 40367485 40367503 CTGATCCCGTATACGTAGC 59 NA Mus musculus 50 Mbd2 ENSMUSG00000024513 ENSMUST00000074058 3 1 3 180 18 70728611 70740315 TACTACTTCAGTCCAAGTGG 58 70740458 70752866 CTGGTTTACCCTTGTTCTG 57 NA Mus musculus 50 Keg1 ENSMUSG00000024694 ENSMUST00000025598 2 1 1 80 19 12784107 12784125 CTTACAGAGTTCCCAAGCA 59 12784167 12785482 GTCCCATAAACCTTTAAGGAC 58 NA Mus musculus 50 Rad9 ENSMUSG00000024824 ENSMUST00000025740 1 1 1 96 19 4196071 4196188 CCAAGAAGTTTCGTTCACTG 59 4195994 4196012 TCACCATCACTGTCTTCAG 58 NA Mus musculus 50 Mxi1 ENSMUSG00000025025 ENSMUST00000003870,ENSMUST00000025998,ENSMUST00000111737 1 3 3 87 19 53405963 53420948 ACTGCCAACAGATCTACAC 59 53444060 53444078 GGATCAGAACTTTCAAGCG 58 NA Mus musculus 50 Thoc4 ENSMUSG00000025134 ENSMUST00000026125 1 1 1 111 11 120457369 120458957 GATATTCAGGAACTCTTTGCTG 59 120457279 120457297 CTGCTTTCCGTTCAAAGTG 59 NA Mus musculus 50 Fgd1 ENSMUSG00000025265 ENSMUST00000101166 1 1 3 60 X 147501947 147501966 GAAAGAGAAATTCCAGTGCC 59 147501987 147502007 CATAAGTCAGTACCTCCACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem192 ENSMUSG00000025521 ENSMUST00000026595,ENSMUST00000079896 1 2 2 80 8 67480418 67483249 TGTTGCTTATACATGTCGTG 58 67483291 67483310 TGTCTTCAGTTGGATTAGGA 57 NA Mus musculus 50 Copg2 ENSMUSG00000025607 ENSMUST00000048774,ENSMUST00000026697 3 2 2 81 6 30760375 30760395 AAGCAGAGACAGAGTATTTCG 59 30759714 30760333 GTGTTGGTACAGTCAAACTG 58 NA Mus musculus 50 Pfkfb4 ENSMUSG00000025648 ENSMUST00000051873,ENSMUST00000098369 1 2 3 80 9 108909332 108909351 TTTGATGCAACCAATACGAC 59 108909394 108909745 AAAGAAGGTCTTGTAGCCA 58 NA Mus musculus 50 Uimc1 ENSMUSG00000025878 ENSMUST00000026997,ENSMUST00000058181 2 2 3 80 13 55178811 55178829 GAGGTGAATAACCAGGAGG 59 55177754 55178769 AGAAGACCAGCAACTATTCAG 59 NA Mus musculus 50 Slco5a1 ENSMUSG00000025938 ENSMUST00000115401 3 1 4 145 1 12934176 12979663 TAGCCATCATGTATGTCATGG 59 12884697 12934069 ATGATGACACCAGTTTCCG 59 NA Mus musculus 50 Eef1b2 ENSMUSG00000025967 ENSMUST00000027108 1 1 1 94 1 63225058 63225076 TGTAGAAGACACCACAGGA 59 63225134 63225418 CTTCCTCACTTTCCTCCTC 58 NA Mus musculus 50 Wdr12 ENSMUSG00000026019 ENSMUST00000027173 3 1 1 185 1 60146196 60147876 GAACATTTCATCGGAAGAGG 58 60144935 60144955 GTCATTATCGACTTTCCTTCC 58 NA Mus musculus 50 Pask ENSMUSG00000026274 ENSMUST00000027493 2 1 1 80 1 95223842 95223863 CAATTTATGGAGTCAACCACAG 59 95222100 95223802 AAGTGATATTCTTGCCCAGG 59 NA Mus musculus 50 Inpp5d ENSMUSG00000026288 ENSMUST00000042275,ENSMUST00000072999 1 2 2 80 1 89598014 89598034 CCACCTATCGATTTGAAAGAC 58 89598076 89599708 GCAAGTTGTACTTCATCCC 58 NA Mus musculus 50 Gpr39 ENSMUSG00000026343 ENSMUST00000027581 1 1 1 112 1 127574658 127574676 CTAATGAAGAGCAAGCAGG 58 127574751 127768947 CTCAGGAATATGATGGTCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Srp9 ENSMUSG00000026511 ENSMUST00000027792 2 1 1 60 1 184058832 184058850 ATACAGGCATGTTGATGGG 59 184058871 184061475 CACCAAACAAACTAGATCATCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Dclre1c ENSMUSG00000026648 ENSMUST00000115066,ENSMUST00000100463,ENSMUST00000115067,ENSMUST00000102988,ENSMUST00000100462,ENSMUST00000061852 3 6 7 148 2 3355357 3358040 GAGTTCAGGTTCATGTGGA 59 3360945 3360964 ACCACAGGGTAGTTTATTCC 59 NA Mus musculus 50 Uap1 ENSMUSG00000026670 ENSMUST00000111351,ENSMUST00000027981,ENSMUST00000111350 3 3 3 84 1 172080495 172080514 CTTCATTAAGCCAGACAAGC 59 172079578 172080448 CACCACAAACTTCTTTGCA 59 NA Mus musculus 50 Arpc5l ENSMUSG00000026755 ENSMUST00000112862,ENSMUST00000090993 2 2 2 67 2 38868691 38869244 AGAATCAAGCTGTGAAGGA 58 38869273 38869293 GCTGCTCTTAAAGTTTGTGAG 59 NA DesignNoJunction Mus musculus 50 Slc25a25 ENSMUSG00000026819 ENSMUST00000028160,ENSMUST00000113310,ENSMUST00000113305,ENSMUST00000052119,ENSMUST00000113307,ENSMUST00000113308 2 6 6 89 2 32272769 32272873 CAATGGAGGTTCTGAAGAC 57 32272698 32272716 CTTTAGCCAAGATCCTCCT 58 NA Mus musculus 50 Wdr5 ENSMUSG00000026917 ENSMUST00000113953,ENSMUST00000113952 1 2 2 81 2 27389309 27389330 GATAACCTGGTGTATATCTGGA 58 27389371 27390291 TGGAAATCACAACATCTGTG 58 NA Mus musculus 50 Chmp4c ENSMUSG00000027536 ENSMUST00000029049 3 1 1 88 3 10385717 10387042 TTCATGACAACATGGACCT 58 10387094 10387112 TGCTTCTGAGATTTCCTGG 59 NA Mus musculus 50 Cypt12 ENSMUSG00000027564 ENSMUST00000029080 2 1 1 60 3 17848564 17848582 AAGAACTCCAACAAGAACC 57 17848606 17848624 TCATTATCTCAGCACAGCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Eif6 ENSMUSG00000027613 ENSMUST00000029142,ENSMUST00000109639 1 2 3 294 2 155651943 155652080 CTCAGAGAACTTCTATAGTGTG 57 155649090 155649604 GATCTCTTCTGTCTCCCTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Slc2a10 ENSMUSG00000027661 ENSMUST00000029196 1 1 1 80 2 165343187 165343206 CCTACTTGTTCCTGAAACCA 59 165343249 165343681 AAGTTTAGAGGGAACCTGC 59 NA Mus musculus 50 Adad1 ENSMUSG00000027719 ENSMUST00000029274 2 1 1 60 3 36982226 36982245 CTCTATATGAACCAGTTGCC 57 36982267 36983860 GATTAAGGCGTAACTGTGAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Pias3 ENSMUSG00000028101 ENSMUST00000107076,ENSMUST00000064900,ENSMUST00000107077,ENSMUST00000029743 3 4 4 93 3 96505263 96505281 ATCAACATCACACCCTTGG 59 96505338 96505551 ACAAGGAGTAATTCCGTCC 58 NA Mus musculus 50 G430022H21Rik ENSMUSG00000028114 ENSMUST00000090371,ENSMUST00000029759 1 2 2 80 3 123083215 123083573 TTCTTAAGGGAACGCAGAG 59 123083153 123083171 AATTCTGAGGTCTGTGTCC 58 NA Mus musculus 50 2310039E09Rik ENSMUSG00000028348 ENSMUST00000030033,ENSMUST00000107701 1 2 2 60 4 48676885 48684839 GAGTGGTAATCTTCCAGGAG 59 48684860 48684880 CTGTCTTTAACAACAGACAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Laptm5 ENSMUSG00000028581 ENSMUST00000102577,ENSMUST00000030316 3 2 2 87 4 130485381 130485400 GTTTGAGTATCCTGACCCTG 59 130485450 130486696 GGGAGGTAATTCATGTGGT 58 NA Mus musculus 50 Gale ENSMUSG00000028671 ENSMUST00000102541,ENSMUST00000116275,ENSMUST00000102540 3 3 3 93 4 135521585 135521924 CTCTTTAAGAAGCACAGCT 57 135521980 135521999 CTCTATAGTAGTCCAGAGGC 57 NA Mus musculus 50 Kif2c ENSMUSG00000028678 ENSMUST00000065896,ENSMUST00000106436 2 2 2 81 4 116844407 116844897 GAGCACAGGAATATGACAG 57 116844344 116844363 CTACATTCCATAGTAACCCG 57 NA Mus musculus 50 Mknk1 ENSMUSG00000028708 ENSMUST00000019677,ENSMUST00000116300 1 2 4 60 4 115520953 115529642 TAAAGAACCTTGTGGAGATGG 59 115529664 115529682 CTCTTGTCAGAATCCACGA 59 NA DesignRelaxed, InUTR Mus musculus 50 2410081M15Rik ENSMUSG00000028807 ENSMUST00000030610 3 1 1 112 4 129031739 129034957 TTCCGAACTATTCACCAGG 58 129031645 129031663 TTACATAGTCTGTAGCGCC 58 NA Mus musculus 50 Cdca8 ENSMUSG00000028873 ENSMUST00000084296,ENSMUST00000097892 3 2 3 190 4 124596271 124596871 ATTAGAAAGCTCTCGAGCC 59 124596099 124596117 AAGACACCATAGCTGTCAG 58 NA InUTR Mus musculus 50 Sema3a ENSMUSG00000028883 ENSMUST00000095012,ENSMUST00000030714 1 2 2 260 5 13400044 13400063 GCCAAGACTGAAATTATCGT 58 13455602 13473412 TTGGCACATTCTTTCAGGA 59 NA DesignRelaxed Mus musculus 50 4930522N08Rik ENSMUSG00000029331 ENSMUST00000031274 3 1 1 60 5 100112704 100113844 CTCTAGGATCAATAATCACGG 57 100113865 100113884 CATGTCATAAGTAGGGTGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Anapc7 ENSMUSG00000029466 ENSMUST00000031422 1 1 1 80 5 122878260 122878279 AGCCTTAAGTAAGACTTCCA 57 122878322 122879508 TCAGATGGAAGACACTGAC 58 NA Mus musculus 50 Foxp2 ENSMUSG00000029563 ENSMUST00000115470 1 1 4 74 6 15147086 15147104 TGAAGTAAGCACAGTGGAG 59 15147142 15147160 TTAAGGGAAGCTTTGAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mmab ENSMUSG00000029575 ENSMUST00000100856 2 1 2 148 5 114886547 114886731 CTTCATTCTGCCTTCTGGA 59 114882221 114882239 ATCCGTGTCTCACTATGGT 59 NA Mus musculus 50 C130038G02Rik ENSMUSG00000029651 ENSMUST00000085558,ENSMUST00000110518,ENSMUST00000110515 1 3 5 82 5 149109892 149112982 GACATTACAGGACCAGGTG 59 149113028 149113046 TTAGAGCTTCCTCAAAGCG 59 NA Mus musculus 50 Hsp110 ENSMUSG00000029657 ENSMUST00000076410,ENSMUST00000074846,ENSMUST00000110499,ENSMUST00000110498 1 4 4 81 5 150432964 150432982 GTGTTTGTTGACATGGGAC 59 150432594 150432919 CTGTGCCTAGAACCTTCAG 59 NA Mus musculus 50 4631427C17Rik ENSMUSG00000029772 ENSMUST00000101611 3 1 5 91 6 29718897 29749448 GGTCAAGAAGATGAAGAGGA 58 29749502 29749520 TATCTAAGTCAGGTCCAGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Agk ENSMUSG00000029916 ENSMUST00000031977 2 1 1 89 6 40318601 40318619 ATTGGATTTATCCCGCTGG 59 40318671 40326236 GGCGTCTGTAATATGTTGGA 59 NA Mus musculus 50 Gkn1 ENSMUSG00000030050 ENSMUST00000032129 1 1 1 82 6 87297117 87297135 CCTGAATACATTCGGACCA 59 87296358 87297071 GGTTTGGTCCTGGAATCTC 59 NA Mus musculus 50 Klf15 ENSMUSG00000030087 ENSMUST00000032174,ENSMUST00000113530 2 2 2 120 6 90417423 90417442 AAGATGTACACCAAGAGCAG 59 90424121 90424139 TTGACAACTCATCTGAGCG 59 NA DesignNoJunction Mus musculus 50 Gsg1 ENSMUSG00000030206 ENSMUST00000111911,ENSMUST00000111910,ENSMUST00000087729 2 3 3 94 6 135192099 135192118 GTTAATGGAGAAGGCTTCTC 57 135191371 135191389 GTCCGATATAGGCAGTCTG 59 NA DesignNoJunction Mus musculus 50 Ckm ENSMUSG00000030399 ENSMUST00000003643 1 1 1 178 7 20004902 20005464 CCTGCAGAAGATTGAGGAG 59 20005606 20005624 GAAGGCGAGTGAGAATCTC 59 NA Mus musculus 50 Ranbp5 ENSMUSG00000030662 ENSMUST00000032898 2 1 1 80 14 121332558 121332576 TGCTTATTCCCTACTTGGA 57 121332620 121334263 CTTTCTGAATCAGCTCCTG 57 NA Mus musculus 50 Tpp1 ENSMUSG00000030894 ENSMUST00000033184 2 1 1 97 7 112895526 112895545 TAAATGAGCACAGAATCCTC 57 112895278 112895467 GTGGGTTACATCAAAGAGTC 58 NA Mus musculus 50 Acsm2 ENSMUSG00000030945 ENSMUST00000098084,ENSMUST00000084647 1 2 2 81 7 126726235 126726255 GTTTCCAGGACAATGAAAGTC 59 126726298 126732350 CCTGCTCATCTATGACCTG 59 NA Mus musculus 50 Mmp21 ENSMUSG00000030981 ENSMUST00000033278 2 1 1 80 7 140867795 140868839 CAAAGACTATATGGTTCGTGC 59 140867735 140867755 CTCACCATATTGGTTCCTCTC 59 NA Mus musculus 50 Asb11 ENSMUSG00000031382 ENSMUST00000036858,ENSMUST00000033755 1 2 2 89 X 160892445 160893737 CTAGAACTAGGAGCCAGTG 58 160893790 160893808 ATTGATGACCTCCACACTG 59 NA Mus musculus 50 F10 ENSMUSG00000031444 ENSMUST00000063820,ENSMUST00000033821 2 2 2 102 8 13039561 13039582 GAGTTCAAGAAAGGAAATCTGG 59 13039642 13045085 AGTATTCTTTCGTCTTCTCGTC 59 NA Mus musculus 50 Anxa10 ENSMUSG00000031635 ENSMUST00000034052,ENSMUST00000034054 3 2 2 87 8 64541829 64541848 AATATTTCTGGCCAAGACCT 59 64539856 64541780 TACAACGAACAATAGCAACC 58 NA Mus musculus 50 MGI:107456 ENSMUSG00000031667 ENSMUST00000109609 3 1 1 90 8 93648571 93648733 CTGACTCAGAAGAAGCCTG 59 93648499 93648517 TGAAAGGTTGTACTGAGCC 59 NA Mus musculus 50 2010004A03Rik ENSMUSG00000031750 ENSMUST00000076846,ENSMUST00000034200 2 2 2 80 8 113273452 113279142 CCTGGCTATACTGTCTTGG 59 113273390 113273408 TATCTTGGGTCAGAGTCCA 59 NA Mus musculus 50 Ccl17 ENSMUSG00000031780 ENSMUST00000034232 3 1 1 60 8 97335155 97335173 TGGTGAGCTGGTATAAGAC 58 97335197 97335671 ACAGTCAGAAACACGATGG 59 NA DesignRelaxed Mus musculus 50 Dbndd1 ENSMUSG00000031970 ENSMUST00000074879,ENSMUST00000066198 2 2 2 130 8 126039226 126039244 GACTCAGTAGTCACCAGAG 58 126033876 126039133 TTGACGTCCTTAACGATCTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Dixdc1 ENSMUSG00000032064 ENSMUST00000034566 3 1 2 80 9 50475869 50477571 GTCAATATTCCAAAGAGGTTGG 59 50475810 50475828 GTATCGGTGATTCCCTTCC 59 NA Mus musculus 50 Dpagt1 ENSMUSG00000032123 ENSMUST00000054708 1 1 1 83 9 44135684 44135702 TTCTGCTTCATCCCTTTCC 59 44135749 44136047 TAGGGCCACAAATTCATGG 59 NA Mus musculus 50 Chsy1 ENSMUSG00000032640 ENSMUST00000036372 2 1 1 80 7 73270609 73315722 GTCTGGTCTTATGAGATGCA 59 73315761 73315783 GCTATGGAGATCTCTAATGTACC 59 NA Mus musculus 50 Cyb5r4 ENSMUSG00000032872 ENSMUST00000113151 1 1 2 83 9 86935227 86935245 CAAGAGCCAAATGTCAGAC 58 86935290 86936096 CAATCATAGCTTGGAGAACTG 58 NA Mus musculus 50 Ift57 ENSMUSG00000032965 ENSMUST00000046777 3 1 1 96 16 49736822 49736840 AATCTACGACAGATGCTGC 59 49736897 49758518 ATCCTCCAATCCTTATTGTCAG 59 NA Mus musculus 50 Prss35 ENSMUSG00000033491 ENSMUST00000036426 1 1 1 60 9 86648871 86648889 GGAAGGACTATGTCAAAGG 57 86648912 86648931 TTGTTTCTCATCTTCAGCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Dysf ENSMUSG00000033788 ENSMUST00000113821,ENSMUST00000113823,ENSMUST00000113818,ENSMUST00000089595,ENSMUST00000081904 2 5 5 80 6 84129694 84129712 AATTCTTTGCTTCTGTCGG 58 84129755 84135961 TGTCATAGACCTTCAAGGTG 59 NA Mus musculus 50 Galp ENSMUSG00000034660 ENSMUST00000037553 3 1 1 80 7 6162972 6165443 TGTGGAAGATCATTGATGGA 58 6165485 6165504 CTTTGACAAACGTTTCTCCC 59 NA Mus musculus 50 Gns ENSMUSG00000034707 ENSMUST00000040344 1 1 1 80 10 120828529 120829746 GACCAGGAGGTATTTGTCG 59 120829790 120829808 AGGGTCTATACTCTTGGCA 59 NA Mus musculus 50 Gnat1 ENSMUSG00000034837 ENSMUST00000010205 3 1 1 86 9 107578586 107578604 TCTTCCTCAACAAGAAGGA 57 107578401 107578536 TGTTAGGTCCATCGTAGTC 58 NA Mus musculus 50 5031414D18Rik ENSMUSG00000034959 ENSMUST00000036072 2 1 1 87 14 75442211 75442229 TTAAGTCTAGGGTCCCAGG 59 75442280 75444224 ATGTCCCTCTTGATTGGTG 59 NA Mus musculus 50 Nek11 ENSMUSG00000035032 ENSMUST00000038648 1 1 1 83 9 105202724 105215756 GTCTGACATCTGGTCACTG 59 105202659 105202677 ACAGACAAGAAACTGGAGC 59 NA Mus musculus 50 Ids ENSMUSG00000035847 ENSMUST00000101509,ENSMUST00000114633,ENSMUST00000038111 1 3 3 80 X 67614296 67616162 CTTTCACCCTGGTATATCTTCC 59 67614237 67614257 TCTGAGGATGGATGATAAGGT 59 NA Mus musculus 50 Acss3 ENSMUSG00000035948 ENSMUST00000044668 2 1 1 83 10 106441775 106441793 GCACCAACTGCAATTAGAG 59 106425956 106441729 TGTCTTGAACCTTGTCAGAG 59 NA Mus musculus 50 4632404H22Rik ENSMUSG00000036022 ENSMUST00000114838,ENSMUST00000071023,ENSMUST00000114841,ENSMUST00000114837 2 4 4 81 X 50613093 50613380 TTTGGAAAGCAATGCTTGTC 59 50613031 50613050 TTGGATTGAGAACAGGACTC 59 NA Mus musculus 50 Slc2a6 ENSMUSG00000036067 ENSMUST00000102890 2 1 2 142 2 26878378 26879066 TCTATGTGTCAGGCTATGC 58 26878254 26878273 GTAGTTAGTGAGGACGAAGG 59 NA Mus musculus 50 Fut7 ENSMUSG00000036587 ENSMUST00000100320 3 1 3 72 2 25279477 25280413 CTACAGTTCAAGGGTACCAC 59 25280448 25280466 ATGAATGTTGCTCCTCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem149 ENSMUSG00000036826 ENSMUST00000108161,ENSMUST00000043850 3 2 2 197 7 31351942 31352166 AGCAGTGTAGAAAGAAGCC 59 31352327 31352345 ATATCAGAAGCAGCACCAG 59 NA Mus musculus 50 Xpnpep2 ENSMUSG00000037005 ENSMUST00000115000,ENSMUST00000077775,ENSMUST00000114998 1 3 3 80 X 45483229 45483249 CTATACTCGAGTGCTAATGGG 59 45483291 45483871 GCTTCTATCACTCTCCCTG 58 NA Mus musculus 50 Spry1 ENSMUSG00000037211 ENSMUST00000108109,ENSMUST00000038569,ENSMUST00000094301 2 3 4 145 3 37539728 37541492 GAGGATTTCAGATGCATGG 58 37541601 37541619 CATAGTCTAACCTCTGCCG 59 NA DesignNoJunction, InUTR Mus musculus 50 Dmxl1 ENSMUSG00000037416 ENSMUST00000041772 1 1 1 80 18 50099249 50110856 CAACTCTTCCTTACTATCTGAC 57 50110896 50110915 AGGTTATTTGCTGAGAATGG 57 NA Mus musculus 50 Eef1a1 ENSMUSG00000037742 ENSMUST00000042235 1 1 1 80 9 78327706 78327724 GACACAGTAGCATTTGTGC 59 78327567 78327664 CTTGAACCAAGGCATATTAGC 59 NA Nonspecific Mus musculus 50 Tgm2 ENSMUSG00000037820 ENSMUST00000103122,ENSMUST00000047109 1 2 2 80 2 157946010 157949864 CTACTCTGAGAACAGCATCC 59 157945949 157945968 ACCTTGATGAGGTTTGACTC 59 NA Mus musculus 50 Smarce1 ENSMUSG00000037935 ENSMUST00000103133 2 1 1 60 11 99081055 99081981 GTACAGCAGAAAGGTCTGG 59 99081013 99081032 CTCCCACAACTTTAGGTCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 1110032A03Rik ENSMUSG00000037971 ENSMUST00000042468,ENSMUST00000042576 3 2 2 141 9 50572841 50572859 GGAACCAGGAAAGATACGA 58 50572106 50572334 GGCTCTCGTTTAAATCTATGTG 59 NA Mus musculus 50 Trp53inp2 ENSMUSG00000038375 ENSMUST00000109676,ENSMUST00000043237 2 2 2 88 2 155211123 155211141 CTGAAGACTCCAACTGTCC 59 155211192 155211627 TGTATAGCTGTCCTGTAGGT 59 NA Mus musculus 50 4930520K10Rik ENSMUSG00000038491 ENSMUST00000044774 1 1 1 60 10 40069094 40069112 CGAACTCATTAAGGAACCA 57 40069052 40069070 CTACATTTCCCAGAATGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Irs2 ENSMUSG00000038894 ENSMUST00000040514 1 1 1 60 8 11005986 11006005 GAGACAATGACCAGTATGTG 57 11005945 11005963 CTCTCCTCTTCCAAGATCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gtpbp5 ENSMUSG00000039069 ENSMUST00000049596 1 1 3 128 2 179816928 179818057 CATCCTGAGAGTTGACCAG 59 179818149 179820086 CACTGAATGTAGAGGGTGG 59 NA Mus musculus 50 AW209491 ENSMUSG00000039182 ENSMUST00000038690 3 1 1 60 13 14729822 14729841 TTAAACGAATCAGTGTGGTG 58 14729864 14729882 CTTGCCACTAGTCTCAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Wdr17 ENSMUSG00000039375 ENSMUST00000110334,ENSMUST00000047318,ENSMUST00000110330,ENSMUST00000093510 2 4 4 80 8 55758929 55758950 CACATTAACAGCAGTGTATACC 59 55757917 55758890 CAATTTAAATCACCTGGAGCC 59 NA Mus musculus 50 Gpr37 ENSMUSG00000039904 ENSMUST00000115332 2 1 2 84 6 25616963 25619608 TGATTTACCGGACACAGTC 59 25616897 25616918 CAAGTGACTCAATCTTATCCAG 58 NA Mus musculus 50 4833442J19Rik ENSMUSG00000039958 ENSMUST00000111548,ENSMUST00000111547 1 2 4 60 6 149092911 149092929 CTACAGTGATCCCTACTGG 58 149092953 149092971 AACATACCTAGACAGAGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp609 ENSMUSG00000040524 ENSMUST00000113785,ENSMUST00000046309 2 2 2 88 9 65548683 65548702 TTACAGCCAGTCATATGACC 59 65545462 65548632 AAGGCAAATAGGAACCTGG 59 NA Mus musculus 50 Mgl2 ENSMUSG00000040950 ENSMUST00000041550 2 1 2 104 11 69947675 69947693 AACTTCCAGAACTTGGAGC 59 69947760 69948567 GGACTGGGAAGGAATTAGAG 59 NA Mus musculus 50 Pla2g5 ENSMUSG00000041193 ENSMUST00000102513,ENSMUST00000102512,ENSMUST00000030524,ENSMUST00000102511 1 4 4 82 4 138360473 138360492 AAGAACTATGGCTTCTACGG 59 138357362 138360428 ATCTGACAGCACCAATCAG 59 NA Mus musculus 50 Rap1gap ENSMUSG00000041351 ENSMUST00000063471,ENSMUST00000105835,ENSMUST00000047243,ENSMUST00000105834,ENSMUST00000105833,ENSMUST00000097837 1 6 6 80 4 137274937 137275253 CTCTACAAGGTCTCTGTCAC 59 137275296 137275314 CTTCCTAAACACAGCAGGA 59 NA Mus musculus 50 Serpina3h ENSMUSG00000041449 ENSMUST00000109960 3 1 3 296 12 105488397 105488415 ATGTGTCACCTTGGATAGG 58 105488675 105490903 TCTATCCTCCTAAAGCCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC006965 ENSMUSG00000041674 ENSMUST00000028543 1 1 2 181 11 112572406 112572425 CTTCTTTGTCAAGTCTTGGG 58 112539165 112552616 CAAGAGCCCTTAGTGTCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Tspo ENSMUSG00000041736 ENSMUST00000047419 2 1 1 277 15 83402025 83402648 GGTATGGCTCCTACATAGTC 58 83404319 83404337 ATAGTAGTTGAGCACGGTG 59 NA DesignNoJunction Mus musculus 50 Rnf10 ENSMUSG00000041740 ENSMUST00000112097,ENSMUST00000112093,ENSMUST00000100842,ENSMUST00000040555 1 4 4 80 5 115707178 115710141 GAAGACGAGATGAGGTAGC 59 115707116 115707135 TCAGGTTGATCTTCTTAGGG 58 NA Nonspecific Mus musculus 50 Zfp386 ENSMUSG00000042063 ENSMUST00000077866,ENSMUST00000073551 3 2 3 86 12 117293410 117297381 AGCAGTACAAACCTCTTTCTC 59 117297426 117297447 CATTAGTCACTTCTGTGAAGGA 59 NA Mus musculus 50 Olfr631 ENSMUSG00000042219 ENSMUST00000059011 1 1 2 101 7 111067172 111077303 AACTCAAGGTCTATCCTTGAG 58 111077366 111077384 TGAGGTAGAACATAGGGCT 59 NA InUTR Mus musculus 50 Ipo11 ENSMUSG00000042590 ENSMUST00000109293,ENSMUST00000080856 1 2 3 80 13 107637536 107638335 GTTATTGAAGGCGAGAGGT 59 107637474 107637494 GCTGGTATTCTGGAGTAAGAC 59 NA Mus musculus 50 1810007P19Rik ENSMUSG00000042616 ENSMUST00000035497,ENSMUST00000106156 2 2 2 81 4 125760158 125760176 CTCTAATGGTCGCTTTGTG 58 125760219 125760849 ACTGAACACTCTAATGACTCC 59 NA Mus musculus 50 Flt3 ENSMUSG00000042817 ENSMUST00000049324 1 1 2 80 5 148145994 148146015 CGACGCTAACTTCTATAAACTG 58 148144563 148145956 ACAAAGTATATCCCTTCTGTGG 59 NA Mus musculus 50 Rell2 ENSMUSG00000044024 ENSMUST00000070709,ENSMUST00000091932 2 2 2 254 18 38116756 38116774 CTTGAAGGAGATGCTAGGG 59 38117425 38117682 TGTGTTACTCGGAATCTGC 59 NA DesignRelaxed Mus musculus 50 BC039632 ENSMUSG00000044139 ENSMUST00000051384 3 1 1 88 7 135032309 135032460 AACACCAGTGATGTTTCCA 59 135032239 135032257 TGCAACCGATTGTAGAGAC 59 NA Mus musculus 50 Nkrf ENSMUSG00000044149 ENSMUST00000057093 2 1 1 103 X 34431693 34431713 GCTGAAGGTATTGATATTGGG 58 34430498 34431628 GGATTCTGACCATCGTAGG 59 NA Mus musculus 50 Crb3 ENSMUSG00000044279 ENSMUST00000071826,ENSMUST00000112924,ENSMUST00000097299 2 3 3 73 17 57203076 57203094 AAATAGCACAACTCAACCC 57 57204522 57204540 CAGTGATGGCTACAATAGC 57 NA DesignNoJunction Mus musculus 50 Slc16a13 ENSMUSG00000044367 ENSMUST00000060010,ENSMUST00000108581 3 2 2 95 11 70031416 70032105 TCCTCTATCAGGCTACCTC 59 70031339 70031357 AGAAGAACTCCACTTCCTG 58 NA Nonspecific Mus musculus 50 Olfr1112 ENSMUSG00000044487 ENSMUST00000053050 2 1 1 60 2 87032538 87032557 CATTCTGAAGCTTCCATCTG 58 87032580 87032598 GTGGGAAGAACATGTAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 A730020M07Rik ENSMUSG00000044522 ENSMUST00000050571 2 1 1 177 3 121342534 121346125 GCGATGTGCTGTTTATGTC 59 121340578 121340596 TTGATGCTTGACTTGTCAG 57 NA DesignNoJunction Mus musculus 50 Klk14 ENSMUSG00000044737 ENSMUST00000056329 1 1 1 62 7 50947460 50947478 GTTGTCAGATCAATGGGTC 58 50947504 50949342 AGGGCTACATGAAGAATCG 59 NA DesignNoJunction Mus musculus 50 1700001G17Rik ENSMUSG00000044744 ENSMUST00000051203 1 1 1 188 1 33727049 33727067 AGAGTCAGGGTAACTGAGG 59 33727219 33727237 GACGTCATTCTTACAGCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 D630023F18Rik ENSMUSG00000044816 ENSMUST00000050047 1 1 1 85 1 65163322 65163710 GCTGGAGTCTTAATGAACAG 58 65163256 65163274 TTGGTAGAATCAGGACTGG 58 NA Mus musculus 50 BC023882 ENSMUSG00000045102 ENSMUST00000101332 1 1 3 60 5 34446580 34446599 CTACATGGAATCAGACTGGA 58 34446539 34446557 GAACTTACTGGATGCTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mc2r ENSMUSG00000045569 ENSMUST00000052347 3 1 1 160 18 68567962 68569470 TCTAAGCCAGATCCTTCCA 59 68567820 68567838 AGTTATTTCTTGCGGTGTC 58 NA DesignRelaxed, InUTR Mus musculus 50 4930526D03Rik ENSMUSG00000045794 ENSMUST00000052416 3 1 1 92 2 181432003 181432022 GTTTCTGGGCCTTATTAAGG 58 181431816 181431948 AAAGAGATTTCCTCTGCCC 59 NA DesignNoJunction Mus musculus 50 Paip2b ENSMUSG00000045896 ENSMUST00000058383 2 1 1 144 6 83760064 83764728 TTTCAACAGACAGGTGGAG 59 83759938 83759956 TAACTGCTGTTGTAAGTGC 57 NA DesignRelaxed Mus musculus 50 Ccdc16 ENSMUSG00000046010 ENSMUST00000056677 3 1 1 60 11 82578649 82578668 ATCAGATGGACAAAGAGTGG 59 82578690 82578709 GAGATAGTGTTGACTTGCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Camk2n1 ENSMUSG00000046447 ENSMUST00000050918 2 1 1 78 4 138012648 138012667 ATAGGATTGATGACGTGCTG 59 138012708 138012726 TCAACACATTGTCTTTGGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Olfr218 ENSMUSG00000046643 ENSMUST00000057548 3 1 1 60 1 175133521 175133541 GTTCCTCTTTGAAGGTTTCTC 58 175133562 175133581 CACAATAAAGAAGCCAAGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1810007E14Rik ENSMUSG00000046804 ENSMUST00000061360 1 1 2 128 2 118598523 118600383 CTACTCTACACTCTCAGGTG 58 118603487 118603505 GATGTCCCTCATGACAGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Ddit4l ENSMUSG00000046818 ENSMUST00000053855 2 1 1 80 3 137287224 137288936 GAGTCTGCTAAGTGATTTCGA 59 137288976 137288996 GTTGTCTCTTCAAATACCACC 58 NA Mus musculus 50 Cdcp2 ENSMUSG00000047636 ENSMUST00000062495 2 1 1 145 4 106777992 106779333 CTTCTCAGGAGAATGCCAG 59 106779442 106779460 CCAGGATGAAGACCTTGAC 59 NA Mus musculus 50 Nr1h4 ENSMUSG00000047638 ENSMUST00000105296,ENSMUST00000058126 3 2 2 128 10 88936598 88936616 AGATTGCTTTGCTCAAAGG 58 88919381 88936507 CAGAGATACCACTCTTTCGA 58 NA Nonspecific Mus musculus 50 Zfp710 ENSMUSG00000048897 ENSMUST00000049680 3 1 1 115 7 87227331 87227349 CTCAAGCATCAGAATGTGC 59 87230838 87230856 CACTTGAACTCCTTCACAC 58 NA DesignNoJunction Mus musculus 50 Neurog1 ENSMUSG00000048904 ENSMUST00000058475 1 1 1 93 13 56352639 56352657 GAAGACTTCACCTATGGCC 59 56352564 56352582 GGTATGGGATGAAACAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr367 ENSMUSG00000049094 ENSMUST00000054726 1 1 1 93 2 37126793 37126812 TGTTTATACAATGGTCACCC 57 37126868 37127045 TCTAGTCCAGTCTTTCCAC 57 NA Mus musculus 50 Q5DU56-2 ENSMUSG00000049871 ENSMUST00000096308 1 1 1 80 16 3954005 3954565 AGAACTTAGACCTACAGAGCA 59 3953945 3953963 GTGTCTGGTTACTGCAGAG 59 NA Mus musculus 50 Fhl4 ENSMUSG00000050035 ENSMUST00000059383 1 1 1 60 10 84561438 84561456 AAGTGTTCTCAACTCTTGG 57 84561396 84561414 TGCACAGGATATTCTTGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp697 ENSMUSG00000050064 ENSMUST00000056096 3 1 1 110 3 98229315 98229333 GACACAGAAGATAGAGGCC 59 98229407 98231086 CTCTGAACAGACAGTGGAC 59 NA DesignNoJunction Mus musculus 50 Nhedc1 ENSMUSG00000050150 ENSMUST00000078568,ENSMUST00000116272,ENSMUST00000090209 3 3 3 81 3 135034972 135036094 TCTCATTGGGATGTTACTGG 59 135036136 135036156 CCATGTGGTAGGAATATGGAC 59 NA Mus musculus 50 Olfr807 ENSMUSG00000050478 ENSMUST00000059038 3 1 1 60 10 129192465 129192486 GTGACAACCTTTATTCTTCTGG 59 129192426 129192445 GGAAGATTACAATTTGCCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 9630050M13Rik ENSMUSG00000050530 ENSMUST00000072955,ENSMUST00000115099,ENSMUST00000062934 2 3 4 114 2 3140847 3142098 ATTATTGCAGGAGGAAGTG 57 3142176 3142194 AAGTTGATGTGAGACATGG 57 NA Mus musculus 50 Tmem123 ENSMUSG00000050912 ENSMUST00000052865 1 1 1 81 9 7791037 7791055 CTCCAAACTCTACCCACAC 59 7791100 7791320 GTTGCTGAAACCGTTACAG 59 NA Mus musculus 50 Commd1 ENSMUSG00000051355 ENSMUST00000071068,ENSMUST00000057843 2 2 2 93 11 22856424 22856445 CCATAATAGAGCTGGAATTTGG 58 22799999 22800018 TTCTTCAGGATTTGCTTGAC 58 NA DesignNoJunction Mus musculus 50 Tubgcp6 ENSMUSG00000051786 ENSMUST00000109353,ENSMUST00000063284 3 2 3 98 15 88932593 88932696 TATGATTCCATGTCAGAGCC 59 88932514 88932532 TACTGCTGACTGAACTTGG 59 NA Mus musculus 50 Lrrc15 ENSMUSG00000052316 ENSMUST00000064606 2 1 1 60 16 30273094 30273113 CCATTTCTTCTACCACAGAG 57 30273053 30273072 GTGTTTAGATCGGTGTAGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Casc3 ENSMUSG00000052915 ENSMUST00000037915,ENSMUST00000107487,ENSMUST00000107485,ENSMUST00000037930 2 4 4 143 11 98660634 98660652 TCCAAGCCTTTCTCATGTG 59 98661395 98661413 AATGGGAGAGTGCTTAGGA 59 NA DesignNoJunction Mus musculus 50 ENSMUSG00000053178 ENSMUSG00000053178 ENSMUST00000065462,ENSMUST00000115464 2 2 2 60 5 4196412 4196431 GATTTAAGAGGCTGGATGCT 59 4196453 4196472 TGAATGAAATCGACTTGAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cib4 ENSMUSG00000053194 ENSMUST00000065486 2 1 1 129 5 30836654 30847052 AATGAGATTCTGTGCATCCA 59 30800528 30800546 GGTCTCTGAAAGGGTTGAC 59 NA Mus musculus 50 Dpep2 ENSMUSG00000053687 ENSMUST00000081998,ENSMUST00000034373 3 2 2 84 8 108513842 108513861 TAACCTGAGAAACTTCACCC 59 108513484 108513795 GTAAGCAGACCAGAACTGG 59 NA Mus musculus 50 Lifr ENSMUSG00000054263 ENSMUST00000067190 2 1 1 80 15 7138157 7140122 GAAGCGAGAATGGATTAAGG 58 7140165 7140183 CTCTTCTGAAACTGTAGCG 57 NA Mus musculus 50 A630033H20Rik ENSMUSG00000054293 ENSMUST00000067249 1 1 1 60 X 104366863 104366882 AGCCAATAACAGTGAATCGT 59 104366904 104366923 TGAAGCCATAGTAATGTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Spcs3 ENSMUSG00000054408 ENSMUST00000067476 2 1 1 86 8 55610351 55610369 GAGGTGATAATCCGAAGCT 58 55608736 55610299 CATTCCTGTTTCCCTTGAG 58 NA Mus musculus 50 9130017K11Rik ENSMUSG00000055134 ENSMUST00000068548 3 1 1 103 11 67735882 67735900 CTAAACAGCGTAGCTAACC 57 67735967 67735985 TAGTCTTCATCTGGCTTCC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 C330011M18Rik ENSMUSG00000056753 ENSMUST00000071067 1 1 1 72 8 86590233 86590251 AATTCGTTGACTTCACAGG 57 86590179 86590197 GACTAGAATCGTACCAGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gjc3 ENSMUSG00000056966 ENSMUST00000077119 1 1 1 82 5 138398483 138398502 TCTGTAAGATCCAAGGACAC 58 138397660 138398441 CAACTTTACAACTCTGCATCTC 59 NA InUTR Mus musculus 50 AF366264 ENSMUSG00000057116 ENSMUST00000071308 2 1 1 60 8 13837375 13837393 GATTTACCGGAAACATGGG 58 13837333 13837352 GGAGTAAGCTATTGCCTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000057559 ENSMUSG00000057559 ENSMUST00000071166 1 1 1 92 9 44287594 44287612 GGCTTCCTGATAGATGGTG 59 44287520 44287538 AAGGCATACTTCAAGGAGG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Olfr732 ENSMUSG00000057782 ENSMUST00000075891 1 1 1 60 14 50901874 50901892 TCATCCTCATAGGACTGAC 57 50901832 50901850 AAGCTCAGAACAAAGACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr111 ENSMUSG00000057899 ENSMUST00000113614,ENSMUST00000077782 1 2 2 80 17 42848360 42850025 AGATGCAGAGTTACAGTGC 59 42848298 42848317 TTCTGTCTTGGATGAAGGTC 59 NA Mus musculus 50 Olfr825 ENSMUSG00000058084 ENSMUST00000076814 1 1 1 60 10 129599721 129599740 TCACAGTCATCATTGTTTCC 58 129599680 129599701 ACGGATCGTATCTTTAGAACAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Adra2b ENSMUSG00000058620 ENSMUST00000104934,ENSMUST00000071902 1 2 2 60 2 127189368 127189386 CCATCACCTTTCTCATCCT 58 127189410 127189428 AACACAGCCAGAATTACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc27a4 ENSMUSG00000059316 ENSMUST00000080065 3 1 1 80 2 29665243 29665365 GCACAGCAGGTATTATCGT 59 29665408 29665427 AGGCAGTCATAGACAATGTC 59 NA Mus musculus 50 Olfr1371 ENSMUSG00000060170 ENSMUST00000075844 3 1 1 76 11 52026721 52026740 TTATGGCTCAGGTATCTCCA 59 52026664 52026682 AAAGGGCAAGAAATTTCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp462 ENSMUSG00000060206 ENSMUST00000098070,ENSMUST00000030131,ENSMUST00000079605 2 3 3 80 4 55029959 55032965 GCATTCAGACACAACTTGG 59 55033009 55033027 GAAAGAGCAGAGTTTGCAG 59 NA Mus musculus 50 Pwwp2b ENSMUSG00000060260 ENSMUST00000093993 1 1 1 230 7 146442016 146442034 GACTGAAGATGGAAGGACG 59 146452539 146452557 GATACATTCAGCCGAGAGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Olfr530 ENSMUSG00000060974 ENSMUST00000074177 2 1 1 71 7 147559479 147559497 TAAACCAGTCGGTTGTGAC 59 147559426 147559444 AGAGAACATCCTGGATCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tnnt3 ENSMUSG00000061723 ENSMUST00000105955,ENSMUST00000073821,ENSMUST00000105958,ENSMUST00000078497,ENSMUST00000105950,ENSMUST00000105954,ENSMUST00000105953,ENSMUST00000105952,ENSMUST00000105957,ENSMUST00000074187,ENSMUST00000105956,ENSMUST00000105949,ENSMUST00000105948,ENSMUST0 3 20 20 87 7 149696603 149697170 GTAGACTTTGATGACATCCAG 58 149697219 149697237 TTCTAGCTTCAAAGTGGCT 58 NA Mus musculus 50 Kalrn ENSMUSG00000061751 ENSMUST00000114973,ENSMUST00000076810,ENSMUST00000074924 3 3 13 83 16 33989968 33992956 CATCTCCTCCTGTGATTCTG 59 33989904 33989924 GCTATGCAGGTATAAATCCCA 59 NA Mus musculus 50 Abca14 ENSMUSG00000062017 ENSMUST00000066920,ENSMUST00000084640,ENSMUST00000049119 1 3 3 80 7 127390791 127390809 ATGTCAAAGGATCTGAGCG 59 127390853 127391459 GATCACCACCTTAGTGTCC 59 NA Mus musculus 50 AA415398 ENSMUSG00000062260 ENSMUST00000079611 3 1 1 81 4 119205969 119205989 CGTAACAGAGCTTATACAGAC 57 119204344 119205926 TCAAATGTTCCTGGAAAGG 57 NA InUTR Mus musculus 50 T ENSMUSG00000062327 ENSMUST00000074667 3 1 1 93 17 8629102 8629852 AATGAGGAGATTACAGCCC 58 8630018 8630037 CCATTACATCTTTGTGGTCG 58 NA Mus musculus 50 Olfr516 ENSMUSG00000062434 ENSMUST00000071410 2 1 1 60 7 115989341 115989359 TGCACATCCCTATGTACCT 59 115989299 115989318 GTACTGAAACAGAGGTCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930512M02Rik ENSMUSG00000062511 ENSMUST00000081896 3 1 1 110 11 11490111 11524653 GAGTCAGATGGAAGAATGCT 59 11489331 11489349 TGCAGTATAAACAGGGCAC 59 NA Mus musculus 50 LOC435962 ENSMUSG00000062536 ENSMUST00000081163 2 1 1 168 7 33950452 33950471 ATCAAATTGCAACTGACCAC 59 33950602 33950620 CTCTGTTAGGCCTTGTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000000651 ENSMUSG00000062551 ENSMUST00000110335,ENSMUST00000079228 3 2 5 131 13 27948373 27948393 CTAGTGAGCGAACTATCTACC 59 27948486 27949375 TCCATTCTGAAGCATGGTG 59 NA Mus musculus 50 Olfr44 ENSMUSG00000062649 ENSMUST00000077757 3 1 1 60 9 39292199 39292217 CACTGAACATCTTTGTCCC 58 39292157 39292178 CTGGCAATAATGAAGATGTAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr969 ENSMUSG00000063359 ENSMUST00000074566 3 1 1 61 9 39603328 39603346 TATGTTGCCATCGGTAACC 59 39603370 39603389 CAAGAACAGACTCGATAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000008689 ENSMUSG00000063929 ENSMUST00000084342 1 1 1 281 4 115284232 115287225 TTTACCCAAAGGTGTCCAG 59 115294149 115294167 GACTTCAGCACAATTCGTG 59 NA DesignRelaxed Mus musculus 50 ENSMUSG00000064032 ENSMUSG00000064032 ENSMUST00000081739 2 1 1 60 19 10276159 10276179 TACCAGCTATGCGAATATGAC 59 10276201 10276219 ATCGGTTAGACATCTGTGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 D12Ertd647e ENSMUSG00000064215 ENSMUST00000085065,ENSMUST00000079294,ENSMUST00000066701,ENSMUST00000076702,ENSMUST00000076788 2 5 5 104 12 104677707 104677726 TGTCAGCTATTGCTAATGGG 59 104678184 104678202 CCACGATGACAGTAGATGG 59 NA DesignNoJunction Mus musculus 50 Cntn4 ENSMUSG00000064293 ENSMUST00000089208,ENSMUST00000113264,ENSMUST00000113261,ENSMUST00000113260,ENSMUST00000113258,ENSMUST00000079416 3 6 6 82 6 106473562 106473581 GGAATGTAAAGCAAATGGGA 58 106473623 106475364 GTATTCTATCCCGTGTTAACAG 58 NA Mus musculus 50 mmu-mir-152 ENSMUSG00000065515 ENSMUST00000083581 1 1 1 60 11 96711712 96711732 CCTAGGTTCTGTGATACACTC 59 96711754 96711772 CAAGTTCTGTCATGCACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fkbp15 ENSMUSG00000066151 ENSMUST00000084527,ENSMUST00000084528,ENSMUST00000098033,ENSMUST00000107461 1 4 4 80 4 62001361 62001668 CTTTGAGCTAATGGTTCGG 58 62001299 62001319 GACTCAAACATGATAGACCAG 58 NA Mus musculus 50 Wdr35 ENSMUSG00000066643 ENSMUST00000085745,ENSMUST00000111113 2 2 2 80 12 9026807 9028544 GTTGCTTCCAGAAATAGCC 58 9028587 9028606 TGGTTACACTTCAAGAATGC 58 NA Mus musculus 50 Ppp1r3c ENSMUSG00000067279 ENSMUST00000087321 2 1 1 87 19 36808830 36811046 CCAGAATGATCCATGTGCT 59 36808761 36808779 GAATGAGCCAAGCAAATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Crygd ENSMUSG00000067299 ENSMUST00000045028 1 1 1 281 1 65109857 65109968 GATCACCTTCTATGAGGACC 58 65108719 65108737 TCTTCCCTCTCGTACAGTC 59 NA DesignNoJunction Mus musculus 50 Dmrtc1c ENSMUSG00000067561 ENSMUST00000087896 3 1 1 98 X 100046979 100046997 TCTGCCTTACATGTCAGTG 59 100046023 100046917 ATACTTGAGCATGGGTTGG 59 NA Nonspecific Mus musculus 50 ENSMUSG00000068601 ENSMUSG00000068601 ENSMUST00000090237 3 1 1 69 6 39370649 39370754 AAGGAACTGTCAGAATCCC 58 39370787 39370805 TGGGATTCCAAGATGTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 V1rh4 ENSMUSG00000069292 ENSMUST00000091732 3 1 1 60 13 22475314 22475332 AGGACAACACCTTAATGGT 58 22475354 22475374 CTAAACGTTGCATAACCAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Msi2 ENSMUSG00000069769 ENSMUST00000107909,ENSMUST00000092794 2 2 4 102 11 88573787 88577836 AGATTCCAAGACGATTGACC 59 88403602 88403620 GTTTGCAGACAATCCTCCT 59 NA Mus musculus 50 2310016G11Rik ENSMUSG00000070574 ENSMUST00000094460 2 1 1 60 7 51932375 51932393 GACAGAAGAAACTGAGACG 57 51932417 51932435 TGCAGAGTTACTATCCGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Csn1s1 ENSMUSG00000070702 ENSMUST00000094641 2 1 1 80 5 88106653 88107073 CTATCCACATATGGAACAGC 57 88108054 88108073 TGATCCACTACACTCATAGG 57 NA Mus musculus 50 Olfr1116 ENSMUSG00000070854 ENSMUST00000090717 3 1 1 79 2 87149300 87149320 GCCACCCTCTACAATATTCTC 59 87149361 87149379 AATCCCACTGATCCAAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG622319 ENSMUSG00000070995 ENSMUST00000024796 3 1 1 60 6 148557093 148557112 TCCTATGTCCTGAAATTGTG 57 148557052 148557071 CTGTCTCCAAACATAGACCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ptgdr ENSMUSG00000071489 ENSMUST00000095959 1 1 1 60 14 45473124 45478097 CTGCCTTTAATTTATCGTGC 57 45473083 45473101 CTCCTTCAGCTTTGTTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000000514 ENSMUSG00000071491 ENSMUST00000095961 3 1 1 79 13 22897639 22897657 TCTACTGGACTGATTGTGC 58 22897578 22897596 TTCTTCAGTATTTGCCACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 1110067I12Rik ENSMUSG00000071656 ENSMUST00000096257 1 1 1 60 19 8926208 8926226 AACCTCAGATCTTGACCCT 59 8926250 8926268 GCTACTGTCACATCATCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Klf12 ENSMUSG00000072294 ENSMUST00000097079 2 1 1 80 14 100386700 100386720 CCAAATGTGACCTTAGATAGC 58 100341306 100386659 TGGATGTACCTCTTGTACTG 58 NA Mus musculus 50 ENSMUSG00000072618 ENSMUSG00000072618 ENSMUST00000100713 2 1 1 60 15 36801384 36801402 TCTGTTACAGAACTCCAGC 58 36801342 36801360 TCTGACTGTGATGTTTGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 6330534C20Rik ENSMUSG00000073207 ENSMUST00000101588 2 1 1 60 X 50151912 50151930 ACTTAACTGAAGAGCTCCA 57 50151954 50151972 CTGTTCTCTAGGCTCAACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000010207 ENSMUSG00000073726 ENSMUST00000054977,ENSMUST00000105777 1 2 2 71 4 143106288 143106586 TGAATGAATTGCTCGTGTG 58 143106621 143106639 ACTGTGAGTACTTGCAGAG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Olfr689 ENSMUSG00000073907 ENSMUST00000098153 3 1 1 60 7 112462698 112462717 TGCATCAGTCAATGTATCAG 57 112462740 112462758 GTAGCCAAACCAATATCCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074029 ENSMUSG00000074029 ENSMUST00000093527 1 1 1 60 9 119069924 119069943 TACCATACTGTCCTACAGTC 57 119069966 119069984 GAGAGGCTAGCATTCTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001094088.1 ENSMUSG00000074046 ENSMUST00000082166 1 1 1 77 8 125365799 125365817 AAGAAACTAGTGAAGGCGT 58 125365858 125365876 TACTTCTCCGTATTCTGCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074106 ENSMUSG00000074106 ENSMUST00000093178 1 1 1 285 8 109572556 109572574 TAGTTCCCGTGTAACTTCC 58 109572822 109572841 TAACAGAGAAGAGGGAACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ntf5 ENSMUSG00000074121 ENSMUST00000058879 1 1 1 118 7 52671211 52671229 TCAGTACTTCTTCGAGACG 58 52671311 52671329 TAGCCTTGCATTCTGAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2810426N06Rik ENSMUSG00000074165 ENSMUST00000100275,ENSMUST00000045720,ENSMUST00000098508 3 3 3 107 7 48902980 48903199 TTGTGTCGGAAACAAATGG 58 48903580 48903601 CCTTCAGTACTCTCATAGAGTC 58 NA Mus musculus 50 NM_001033197.2 ENSMUSG00000074804 ENSMUST00000099379 2 1 1 60 2 129926594 129926613 GGAGGATTGAAATGGATGAG 58 129926636 129926654 CAGACAGGACATTTGAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG433024 ENSMUSG00000075038 ENSMUST00000099713 1 1 1 80 16 49929618 49955000 GAACAAGTCCTACACAGCA 59 49929556 49929576 TGACTCAGGGAAATTATGAGG 59 NA Mus musculus 50 Olfr1256 ENSMUSG00000075073 ENSMUST00000111520,ENSMUST00000099763 3 2 2 60 2 89675900 89675919 TTGCTAGCTTGTCATTTGTG 59 89675859 89675880 GAAATCAACTTGGGAGAAATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1154 ENSMUSG00000075146 ENSMUST00000099844 2 1 1 71 2 87743631 87743649 TTTCCTCTGTATGCTGTCC 58 87743578 87743597 AGATCCACAAGTAATTTGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 NM_013859.2 ENSMUSG00000075227 ENSMUST00000099935 1 1 1 87 19 6062126 6062144 CTACACTCTGACAGCACTG 59 6062197 6062215 TAAAGTCGATCTCGCTCTC 58 NA DesignNoJunction Mus musculus 50 NP_001020457.1 ENSMUSG00000075259 ENSMUST00000105513 1 1 2 73 10 31671106 31671289 AGAAACAGACCTTATCCTGAC 59 31671053 31671071 TACATCCTGGTCCATTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075264 ENSMUSG00000075264 ENSMUST00000099983 2 1 1 60 19 5118567 5118585 TCCACATTGATTGACTGTC 57 5118608 5118627 TGAGCATTAAGTCAATGCAC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 ENSMUSG00000075547 ENSMUSG00000075547 ENSMUST00000100443 1 1 1 63 2 5833503 5833521 TATAGCATTCACCAAGCCA 58 5833548 5833566 TACAGAGGTGGAAGAAGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV9-129 ENSMUSG00000076507 ENSMUST00000103308 2 1 1 65 6 67790047 67790065 CAAGTCAGGACATTCATGG 58 67790091 67790112 GGTGTTTAATAGTTTCACCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-11 ENSMUSG00000076742 ENSMUST00000103551 2 1 1 71 12 117219039 117219057 GATTTATCCTGGAAGCGGT 59 117218986 117219004 GTGTCTACAGTCAATGTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV6D-5 ENSMUSG00000076772 ENSMUST00000103582 3 1 1 220 14 53414884 53415033 TGGAGAAAGCAATGGAGAC 59 53415216 53415235 TCCCTTTATCATACGTAGCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRDC ENSMUSG00000076872 ENSMUST00000103684 3 1 1 133 14 54762749 54762767 GCACAACAGTGAAACTGTG 59 54763505 54763889 TGTGAACTGTGACTCTTGG 59 NA Mus musculus 50 F8a ENSMUSG00000078317 ENSMUST00000105111 1 1 1 170 X 70474760 70474778 TTCTGCAGGAAACCATCTC 59 70474912 70474930 CCAAATTAACATGGCAGCA 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ifna2 ENSMUSG00000078354 ENSMUST00000105147 3 1 1 60 4 88329409 88329427 AGACCTTGAACCTCTTCAC 58 88329367 88329385 TCTAGGAGGGTTGTATTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 EG237412 ENSMUSG00000078433 ENSMUST00000105311 3 1 1 102 10 81831350 81831368 TTACTCAAGAGGAATGGGC 58 81831432 81831652 CATTTATAGCCTATAGCCGTG 58 NA Mus musculus 50 A2A7I1_MOUSE ENSMUSG00000078497 ENSMUST00000105722 3 1 1 80 4 146759343 146759361 CTCCTCACCAAGAATCTGG 59 146759404 146762443 AGGTTAATAGACACTGTGCA 58 NA Nonspecific Mus musculus 50 F930017I19Rik ENSMUSG00000078630 ENSMUST00000106969,ENSMUST00000106970 3 2 2 87 7 109049802 109050536 CCTGTTAAAGGTCAGATTCTG 58 109049735 109049755 TAGAGTATCCACAGTATGTGC 58 NA Mus musculus 50 Tm2d3 ENSMUSG00000078681 ENSMUST00000065574,ENSMUST00000107495,ENSMUST00000032726 2 3 3 82 7 72840145 72840163 AATGTCTCCTGCACTTACG 59 72840209 72842595 TTGAGGTCTTGATCGACAC 59 NA Mus musculus 50 MGI:2442118 ENSMUSG00000078777 ENSMUST00000082169 3 1 1 149 7 28860373 28860391 TATGCCTACAGCCATTCTG 59 28870016 28870036 AAAGTCCATCTCTATCACACC 59 NA DesignNoJunction Mus musculus 50 C030006K11Rik ENSMUSG00000079002 ENSMUST00000036247 2 1 1 96 15 76554089 76554108 TACTATGTGGATCACCAAGG 58 76553390 76553408 AGAAAGTGACCAGGAACTG 59 NA DesignNoJunction Mus musculus 50 Hoxd3 ENSMUSG00000079277 ENSMUST00000053932 3 1 4 179 2 74566732 74581995 GCTCTAAGGTTACCTGGAG 58 74582138 74582156 CAAAGAGTCCTGGGTTCTC 59 NA InUTR Mus musculus 50 1700110I01Rik ENSMUSG00000079397 ENSMUST00000112791 1 1 1 82 14 3995703 3995721 CAGTGAATCAGAGCAGGAG 59 3995767 4023518 ATCAATGCTACTTGGTCCC 59 NA Nonspecific Mus musculus 50 Csprs ENSMUSG00000079457 ENSMUST00000113402 3 1 2 147 1 85198876 85204589 TGAATGTGATGCCTCTGTG 59 85204698 85204718 AGGAAGAGGTATTGGAAATGG 59 NA InUTR Mus musculus 50 A2ALE2_MOUSE ENSMUSG00000079537 ENSMUST00000114150 2 1 1 88 2 26107574 26107592 CCTTGTGTCTTTCTCCCTG 59 26107283 26107522 TCTTTCTTGGTGGCAAGAG 59 NA Mus musculus 50 Il12rb1 ENSMUSG00000000791 ENSMUST00000000808,ENSMUST00000093452 1 2 2 86 8 73335120 73336383 TGTACAACTGGACCAAGAC 59 73336433 73336451 ACACATTCCAGTCCATTCG 59 NA Mus musculus 50 Gmcl1 ENSMUSG00000001157 ENSMUST00000001185 1 1 2 80 6 86650647 86654506 CCAAAGATGGTGAGTACTG 57 86650585 86650604 TGTATCGATTGGTGTAAGTC 57 NA Mus musculus 50 Rin2 ENSMUSG00000001768 ENSMUST00000110005,ENSMUST00000094480,ENSMUST00000071473,ENSMUST00000110004 3 4 4 83 2 145709213 145711350 GACTTTCAGAATTACCTCCGA 59 145711395 145711413 GATGTACGGTCTCACAAGG 59 NA Mus musculus 50 Mybpc3 ENSMUSG00000002100 ENSMUST00000111430 1 1 2 95 2 90964090 90964108 AAGATTCGGCTTACTGTGG 59 90964167 90964550 GAAGATGTACCTGCCACTC 59 NA Mus musculus 50 Ddb2 ENSMUSG00000002109 ENSMUST00000111352,ENSMUST00000028696 1 2 3 81 2 91057558 91058913 CAAACTCTTGCAAGGTCTG 58 91057495 91057513 TGTCCCATATTGTCTCCTG 58 NA Mus musculus 50 Pafah1b3 ENSMUSG00000005447 ENSMUST00000005583 3 1 1 195 7 26082903 26082921 AATGATTTCCTCCTCGGAC 59 26082158 26082176 GTTCCTTGTCTTTGCTGTC 58 NA DesignNoJunction, InUTR Mus musculus 50 Mef2c ENSMUSG00000005583 ENSMUST00000005722 3 1 3 83 13 83792582 83795120 GCCATCAGTGAATCAAAGG 58 83795167 83795185 AAAGTAGGAGTTGCTACGG 58 NA Mus musculus 50 Nr1i3 ENSMUSG00000005677 ENSMUST00000005820,ENSMUST00000111328 2 2 3 81 1 173147792 173147810 CAGCTACAAGAGGAGATGG 59 173147854 173148730 CATACAGAAACCGACTTTGG 58 NA Mus musculus 50 Apoa2 ENSMUSG00000005681 ENSMUST00000111321,ENSMUST00000111320,ENSMUST00000111319,ENSMUST00000005824 1 4 4 81 1 173155862 173155880 AGCATGACTGATTATGGCA 59 173155925 173156287 TCTCAAAGTATGCCTTGGC 59 NA Mus musculus 50 Rfx5 ENSMUSG00000005774 ENSMUST00000107260,ENSMUST00000107254,ENSMUST00000107253,ENSMUST00000107255,ENSMUST00000090837,ENSMUST00000029772 2 6 6 83 3 94760520 94760654 CCAGTCCAAATATTGCTACAG 58 94760699 94760717 GATCCCTTCAAGTCGAGTC 59 NA Mus musculus 50 Ggtla1 ENSMUSG00000006344 ENSMUST00000081083 1 1 3 80 10 75072632 75072650 GAACAACGAGCTTCTAGAC 57 75072693 75073188 GCTTGTTCATGATAGTCAGG 58 NA Mus musculus 50 Rundc3a ENSMUSG00000006575 ENSMUST00000107102,ENSMUST00000107105,ENSMUST00000006750 3 3 4 85 11 102258924 102258942 ACCCATTGATGACTCTTCC 58 102258991 102259407 GGGCACAAGCTTTAAATCG 59 NA Mus musculus 50 1110036O03Rik ENSMUSG00000006931 ENSMUST00000066489,ENSMUST00000107402 1 2 2 80 11 100273088 100273107 TGGTATATTACCGCTTCCAC 59 100272496 100273045 GGTAGAGCATAGCTTCCTC 58 NA Mus musculus 50 Pcdha1 ENSMUSG00000007440 ENSMUST00000047614 3 1 9 221 18 37182198 37182216 TTAGTCCTAGTCTCCCTCC 58 37318983 37319001 TTGCACTGGATACTGTTGG 59 NA DesignNoJunction Mus musculus 50 Acaa1b ENSMUSG00000010651 ENSMUST00000010795 2 1 1 70 9 119062795 119062813 TCTTATGACATTGGCATGG 57 119060988 119061006 ATATTCCCATGGTTCCCTC 58 NA DesignNoJunction Mus musculus 50 Brms1l ENSMUSG00000012076 ENSMUST00000059250,ENSMUST00000012220 2 2 2 80 12 56945447 56945465 CCAGAGTATTTGGAACCAC 57 56945507 56946287 GAGTTCTCTATAGATTCCTGC 57 NA Mus musculus 50 Ehmt2 ENSMUSG00000013787 ENSMUST00000114033,ENSMUST00000078061,ENSMUST00000114028,ENSMUST00000013931,ENSMUST00000097342 3 5 5 93 17 35040028 35040132 AAGGTGACTTCAGATGTGG 59 35040291 35040310 GGATTATATCTCCTGAGCCC 58 NA Mus musculus 50 H2-M2 ENSMUSG00000016283 ENSMUST00000077662 1 1 2 92 17 37618285 37618424 GAGATGGAGTAGACCTCCT 59 37618211 37618229 ATGACAAGAGTAGCCACTG 58 NA Mus musculus 50 C1qtnf1 ENSMUSG00000017446 ENSMUST00000017590,ENSMUST00000106286,ENSMUST00000106284 3 3 3 134 11 118307931 118307950 AGATCAACATCACCATCCTG 59 118309207 118309225 CTCCAATGGATCCCTTCTG 59 NA DesignNoJunction Mus musculus 50 Syne1 ENSMUSG00000019769 ENSMUST00000056571 3 1 5 80 10 4929740 4929762 CAAGAGGATGATGTAGTATTCG 58 4936667 4936687 AATTAGTCTGTCATCCCTCTG 58 NA Mus musculus 50 2810021J22Rik ENSMUSG00000020491 ENSMUST00000108820,ENSMUST00000073924,ENSMUST00000093064 1 3 4 123 11 58690311 58692284 TGCTGTCCTTGAATCAGTG 59 58693431 58693449 CTCTTCATAGGCTGCAGAG 59 NA Mus musculus 50 Efr3b ENSMUSG00000020658 ENSMUST00000111178 1 1 2 80 12 3993048 3999599 ATCGATATGGGTACGTGTG 58 3992986 3993004 AGAGGTTGATACTCTGGCA 59 NA Mus musculus 50 Grin2c ENSMUSG00000020734 ENSMUST00000019007,ENSMUST00000106554,ENSMUST00000003351 2 3 3 89 11 115117057 115117075 CTACGACTTGTACCTGGTG 59 115116727 115117005 CGCTTGTAGTATACCTCACC 59 NA Mus musculus 50 Rph3al ENSMUSG00000020847 ENSMUST00000021208,ENSMUST00000108420,ENSMUST00000108421 2 3 4 61 11 75720029 75720047 CTCCGTATTCTGCAAAGAC 58 75714362 75714380 TTTCTAGGAAGTGCTGCAG 59 NA DesignNoJunction Mus musculus 50 3300001P08Rik ENSMUSG00000020863 ENSMUST00000021226,ENSMUST00000107822 2 2 4 85 11 94154506 94154524 ACAAACCCTGAATCGAAGG 59 94154334 94154457 TACTTACGCTGCACTTCAG 59 NA Mus musculus 50 3300001P08Rik ENSMUSG00000020863 ENSMUST00000107822 2 1 4 103 11 94154308 94154326 ATGAAGATGGAGCTAAGCC 59 94152875 94154243 AACTCTTCAACAGTAGTCCTC 59 NA Mus musculus 50 Gcn5l2 ENSMUSG00000020918 ENSMUST00000006973,ENSMUST00000103118 2 2 3 82 11 100572209 100572463 CATTGAACAGGGTGTACTG 58 100572145 100572163 AGAGCTCAAACATTGTCTG 57 NA Mus musculus 50 Rtn1 ENSMUSG00000021087 ENSMUST00000078505 1 1 3 80 12 73405402 73409157 CATCTTCTGGAACAGAACC 57 73405340 73405358 TAATGGCAGCAATCAACTC 58 NA Mus musculus 50 1810020G14Rik ENSMUSG00000021139 ENSMUST00000110339,ENSMUST00000056161,ENSMUST00000019829 2 3 5 113 12 82611896 82611914 TATGTCTCCAACGACAGTG 59 82605612 82611819 ATCTTGGCCATTTACCGAG 59 NA Mus musculus 50 Vcan ENSMUSG00000021614 ENSMUST00000109543 3 1 6 81 13 89824792 89851823 CTACTGCTTTAAACGACCTG 58 89824730 89824748 ATAGGAAGTCTCGGTAGGA 58 NA Mus musculus 50 Polk ENSMUSG00000021668 ENSMUST00000022172,ENSMUST00000091387,ENSMUST00000091386,ENSMUST00000109449 3 4 6 83 13 97254355 97256775 TTAAGACTGATGGGTGTCC 58 97254290 97254309 TAAGAAACCAATGATGCTCC 57 NA Mus musculus 50 Ppwd1 ENSMUSG00000021713 ENSMUST00000022226 3 1 2 97 13 104997358 104998092 CCACCGTATAATTAAGGGCT 59 104997280 104997298 ATTCGTCCTCAAACTCTCC 58 NA Mus musculus 50 Cenpk ENSMUSG00000021714 ENSMUST00000099187 2 1 3 126 13 105039461 105039479 TGATGTTCCACATGATCCA 58 105039569 105040202 GCATGAGGTCCTTATTTGG 58 NA Mus musculus 50 Dlg5 ENSMUSG00000021782 ENSMUST00000090398,ENSMUST00000073687 3 2 3 100 14 24955892 24956361 AGCACATCAAGGAACAGAG 59 24955810 24955829 CTCCTGATCGATCTTCTGTG 59 NA Mus musculus 50 Kpna3 ENSMUSG00000021929 ENSMUST00000022496,ENSMUST00000053719 2 2 2 80 14 62003585 62003951 GAAACATTATAGGTGATGGTCC 58 62003526 62003544 TGATGAAGGACAGAAGAGG 58 NA Mus musculus 50 E430025E21Rik ENSMUSG00000022350 ENSMUST00000022976 2 1 2 80 15 59194800 59194818 ACCTTCCATTCTTCACACC 59 59192781 59194759 ATGCTGATTACCCAGTTATCTG 59 NA Mus musculus 50 Ly6e ENSMUSG00000022587 ENSMUST00000023251,ENSMUST00000051698 2 2 2 100 15 74788297 74788706 CATGGAGCAAGTTCATTCC 58 74788769 74788788 AGTAATGGTCTTTCTCCTGG 58 NA Mus musculus 50 2610528E23Rik ENSMUSG00000022748 ENSMUST00000099668 3 1 4 137 16 57606858 57606876 TCATCTGGTTGTCAGTTCG 59 57561836 57561854 TCACTTTCTTCTGGGAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Thap7 ENSMUSG00000022760 ENSMUST00000023443 3 1 2 168 16 17530459 17530771 TACTTCCCAAGAAAGACAACC 59 17529157 17530330 CTGTGATACCCACTGATTCC 59 NA Mus musculus 50 Adcy5 ENSMUSG00000022840 ENSMUST00000114913,ENSMUST00000023549 2 2 2 82 16 35289635 35289653 ATCCAAGAAGAACAGCACC 59 35289699 35290122 TGCACATGAACATGTTGAC 58 NA Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000099527 3 1 16 123 16 91854840 91854859 AGTCCTGCTAGTCTAAAGAG 57 91861482 91863518 AATAACCTGGGCAATTTCAG 58 NA InUTR Mus musculus 50 Pi16 ENSMUSG00000024011 ENSMUST00000114701,ENSMUST00000024808,ENSMUST00000114698 1 3 3 85 17 29459344 29462827 TACACTCAGGTAGTGTGGA 59 29462876 29462894 TTAGCTTCTTCCACTCCCT 59 NA Nonspecific Mus musculus 50 Lpin2 ENSMUSG00000024052 ENSMUST00000112646,ENSMUST00000112649,ENSMUST00000053173,ENSMUST00000112647,ENSMUST00000024848 3 5 5 91 17 71578673 71578691 GAAGAGGACTACAAGGAGC 59 71578745 71579620 GGGTAGGTGGTTTCTAATGG 59 NA Mus musculus 50 Pdpk1 ENSMUSG00000024122 ENSMUST00000102927,ENSMUST00000115407,ENSMUST00000115411,ENSMUST00000115408,ENSMUST00000052462 1 5 5 97 17 24238633 24238651 TTTGATGAGACCTGTACCC 58 24237861 24238573 TCTGGTTTAAGGTCTCTGTG 58 NA Mus musculus 50 Epc1 ENSMUSG00000024240 ENSMUST00000115870,ENSMUST00000028100 3 2 3 82 18 6450342 6450360 GAGGAAGAGAATGACCCTG 59 6450199 6450297 GTTTGGTCTAAATGAGGAGC 58 NA Mus musculus 50 Mep1b ENSMUSG00000024313 ENSMUST00000115840,ENSMUST00000082235 3 2 2 80 18 21252098 21252116 AAATCCTGACATCCGACAG 59 21252158 21253437 TAGCTTCCATTATCACTGGTC 59 NA Mus musculus 50 5133400G04Rik ENSMUSG00000024352 ENSMUST00000025209 1 1 2 80 18 35816694 35819944 GTGCAATGAAATTGAATCCC 57 35816633 35816652 TGCTGCAACTCTTTAATCTC 58 NA Mus musculus 50 Eif4ebp3 ENSMUSG00000024483 ENSMUST00000116653 1 1 6 80 18 36813909 36815269 CCTCAAACACATGTAGGAC 57 36815313 36815331 CTGACATAGCATTGACACC 58 NA Mus musculus 50 Eif4ebp3 ENSMUSG00000024483 ENSMUST00000037072 2 1 6 126 18 36813913 36815087 AAACACATGTGACTCTCCT 58 36815176 36815195 TATCTTTCGATCCTGACTGG 58 NA Mus musculus 50 Add3 ENSMUSG00000025026 ENSMUST00000111741,ENSMUST00000050096,ENSMUST00000025999 1 3 3 81 19 53306622 53306640 AAGTAAGGAGCAAGACCAC 59 53306685 53307524 GACTTTCACCAAAGTGGAG 58 NA Mus musculus 50 Gyk ENSMUSG00000025059 ENSMUST00000026039,ENSMUST00000069684,ENSMUST00000081161 2 3 4 139 X 82982682 82985646 CTATGGCCTAATGAAAGCTG 58 82976242 82976260 ATAAGAAGCACCCTGTTCC 59 NA Mus musculus 50 Col17a1 ENSMUSG00000025064 ENSMUST00000026045,ENSMUST00000086923 3 2 2 81 19 47754935 47755882 ATGGAACTTATGAAGGGAGC 59 47753926 47753944 CCTCTGGTTGAAGAAGAGG 59 NA Mus musculus 50 Peo1 ENSMUSG00000025209 ENSMUST00000026227 3 1 1 66 19 45084685 45084704 CAACTTGCAGTTCATGATGG 59 45084911 45084929 AATGTAGTCTTGAGCTGCA 58 NA DesignNoJunction Mus musculus 50 Tro ENSMUSG00000025272 ENSMUST00000087258,ENSMUST00000112709,ENSMUST00000087253,ENSMUST00000087259,ENSMUST00000026307 3 5 5 80 X 147087887 147087906 AATAATTACAGGCGGATCCC 59 147087718 147087844 CTTATTTGCCCTTTCCTGC 59 NA Mus musculus 50 Cyp2e1 ENSMUSG00000025479 ENSMUST00000026552 1 1 3 80 7 147955554 147955572 CAAGAAGTGTCTGGAGCTC 59 147955614 147955961 TAATTGTAAGCCTGGATCCAG 59 NA Mus musculus 50 Eya1 ENSMUSG00000025932 ENSMUST00000027066 3 1 2 90 1 14260920 14264160 GAATTTCCTCCTATGGTGC 57 14260848 14260866 CTAAGAAATCCCGTCTGTC 57 NA Mus musculus 50 Chst10 ENSMUSG00000026080 ENSMUST00000027249 3 1 2 124 1 38924927 38928459 GATCGTCCTAAATGGAGCA 59 38922876 38924840 TCAATCGCTTCTGAATTCCT 59 NA Mus musculus 50 Slc23a3 ENSMUSG00000026205 ENSMUST00000027405,ENSMUST00000094841 3 2 2 81 1 75122585 75122928 AACACTATATCTGGTACACGG 59 75122524 75122542 GCATTTGAATTTCTTGGGC 58 NA Mus musculus 50 Dnpep ENSMUSG00000026209 ENSMUST00000066668,ENSMUST00000113605 3 2 2 80 1 75310982 75311002 CTATGAAGAGTTCATCTTCGC 58 75310068 75310941 CAGGAATCAATCAATGCCTG 59 NA Mus musculus 50 Ush2a ENSMUSG00000026609 ENSMUST00000060479 2 1 3 189 1 190781381 190786604 AAACCCATGTGGGATTAGC 59 190786756 190786775 TCCGTAACAACCTTCTTGTC 59 NA Mus musculus 50 Rsu1 ENSMUSG00000026727 ENSMUST00000028059,ENSMUST00000114791 3 2 2 80 2 13138895 13140651 AACTTCTTCTACCTCACCAC 58 13138834 13138852 CTTCCCAATATCTGGAGGC 59 NA Mus musculus 50 Ly75 ENSMUSG00000026980 ENSMUST00000112533,ENSMUST00000028362 2 2 3 82 2 60170427 60170445 CAATCACAGCTTTCTTGCC 59 60169189 60170381 CCTCGCCAGAAATATTTGC 59 NA Mus musculus 50 Baz2b ENSMUSG00000026987 ENSMUST00000112548 3 1 4 103 2 59770218 59771477 CTAGATATGGAACGGGAGC 59 59764189 59764208 CGTTTCTCTTGCTTCAATCG 59 NA Mus musculus 50 Cybrd1 ENSMUSG00000027015 ENSMUST00000028403 2 1 2 91 2 70967911 70975556 TCCAACAGCTTGTTGTAGG 59 70975611 70975629 AGAATACACGTGTATGGGC 59 NA Mus musculus 50 Slc12a6 ENSMUSG00000027130 ENSMUST00000028549,ENSMUST00000110991,ENSMUST00000053666 3 3 4 91 2 112195289 112196622 GAAACAGCACAAGGTTTGG 59 112196676 112196695 CCAGATCCTTCTTCATCTGG 59 NA Mus musculus 50 Cops2 ENSMUSG00000027206 ENSMUST00000110463,ENSMUST00000110466,ENSMUST00000028635,ENSMUST00000110462 3 4 4 85 2 125668242 125668371 AGACAAACACAAAGCTTGG 58 125668175 125668193 AGACTGATGTAACTGTCGT 57 NA Mus musculus 50 Prei4 ENSMUSG00000027346 ENSMUST00000028822,ENSMUST00000060955,ENSMUST00000110136,ENSMUST00000110142 2 4 7 87 2 132376279 132379701 GAGATTTAGGGTAAAGCTCAC 58 132376212 132376230 TTTGTGAAGAACAGTGGGA 58 NA Mus musculus 50 Stard7 ENSMUSG00000027367 ENSMUST00000069099,ENSMUST00000110375,ENSMUST00000028845 3 3 4 81 2 127117914 127117932 GTCTCCAGAGTTTGTCAGG 59 127117976 127121228 AAAGCCATTCTCATCAAACG 59 NA Mus musculus 50 Lime1 ENSMUSG00000027582 ENSMUST00000116366,ENSMUST00000108806,ENSMUST00000108805,ENSMUST00000048077 3 4 8 142 2 181117740 181117758 CAGCTGACCATTAGTTGTG 58 181117863 181117979 GAGTATAGGACGTCCATCTG 58 NA Mus musculus 50 Tbl1xr1 ENSMUSG00000027630 ENSMUST00000063988,ENSMUST00000065681 3 2 2 80 3 22087424 22088699 CATAAATGAGGATGGCACCT 59 22088742 22088760 ACTACATCGGGCATAACAG 59 NA Mus musculus 50 Rpn2 ENSMUSG00000027642 ENSMUST00000029171 3 1 3 154 2 157147512 157147530 AGCTCAACATGTTCCAGAC 59 157148998 157151456 ATGTGCTGTTCGTAGTGTC 59 NA Mus musculus 50 Cog6 ENSMUSG00000027742 ENSMUST00000036665 3 1 2 141 3 52793064 52793082 TCTTTAGCCAATATGCCCA 58 52787103 52790331 TAATCTGCTCCTTCACTGTG 59 NA Mus musculus 50 Tmem77 ENSMUSG00000027900 ENSMUST00000029507 2 1 2 137 3 106369092 106375899 CAAATTTCCAGGGCTATGTG 59 106376507 106376526 CATGTAAATTGGCTTCCACC 59 NA Mus musculus 50 Adar ENSMUSG00000027951 ENSMUST00000098924,ENSMUST00000107405,ENSMUST00000029563,ENSMUST00000107404 2 4 4 80 3 89540130 89540148 TCAGTTCACTAGTCAGACC 57 89540191 89541926 ACCTGGAATTTAAATCGAGG 57 NA Mus musculus 50 Lphn2 ENSMUSG00000028184 ENSMUST00000037655 1 1 4 82 3 148480882 148485927 TTAACCAAGGACATTCACTG 57 148480819 148480837 GCTGTTGTTGAAGTTACCA 58 NA Mus musculus 50 Cdh17 ENSMUSG00000028217 ENSMUST00000029871,ENSMUST00000108303 2 2 2 81 4 11731258 11734586 CTGACTGTGAGTTATTCACTG 58 11734627 11734647 CAGCACTAAATATCTCACCAG 58 NA Mus musculus 50 Sfrs18 ENSMUSG00000028248 ENSMUST00000029911,ENSMUST00000098238,ENSMUST00000108229 3 3 3 85 4 21793085 21793103 CTAGAAGTCCATCTCCAGC 58 21793150 21796671 CAGCAACATCATTTGGTACTC 59 NA Mus musculus 50 Col15a1 ENSMUSG00000028339 ENSMUST00000102917 2 1 6 200 4 47292821 47293033 TTTGAGATTGAAGGCTCTG 57 47293933 47295503 GATCAAAGAACTGGACAGG 57 NA Mus musculus 50 Jmjd2c ENSMUSG00000028397 ENSMUST00000077851,ENSMUST00000030102,ENSMUST00000102835 3 3 3 88 4 73976680 73976698 CCACTCCAGAATCTACTCC 58 73976750 73979552 CTTATTGCCCTGTAAGCTC 57 NA Mus musculus 50 Eif2b3 ENSMUSG00000028683 ENSMUST00000106448,ENSMUST00000106447,ENSMUST00000070610 1 3 4 80 4 116741415 116743250 AACAAACACCTGATTGGAG 57 116743291 116743312 GACAGAGTGCTTAATAGATGAC 58 NA Mus musculus 50 Pftk1 ENSMUSG00000028926 ENSMUST00000115451,ENSMUST00000115452,ENSMUST00000030763,ENSMUST00000115450 1 4 5 80 5 5010884 5010902 GATGATCCAAGGAGTTGCT 59 4949585 5010843 GTTCCAAGAACCAGAAATATCC 59 NA Mus musculus 50 2610109H07Rik ENSMUSG00000029005 ENSMUST00000030862 3 1 1 77 4 147484173 147484191 CTTAAAGCCAGAGGTCTGG 59 147483781 147483799 GTCTCGTTACCATCACTGG 59 NA DesignNoJunction Mus musculus 50 Pank4 ENSMUSG00000029056 ENSMUST00000070953,ENSMUST00000030931,ENSMUST00000105632 3 3 3 98 4 154350695 154350713 TTATGGGACACTGACTGTG 58 154350775 154351325 TCTTTCTGCTTCACCTTGG 59 NA Mus musculus 50 Bst1 ENSMUSG00000029082 ENSMUST00000030962 3 1 2 106 5 44228771 44233239 GTATCAATGACTACCGAGCC 59 44233306 44233326 TGAAGCCAAAGCTACTAAGAG 59 NA Mus musculus 50 Pcdh7 ENSMUSG00000029108 ENSMUST00000094783 2 1 2 119 5 58304552 58304570 ACAACTATGAGAGGACCAC 58 58520255 58520273 ATTCATCACATTCACGGGT 59 NA DesignNoJunction Mus musculus 50 Agbl5 ENSMUSG00000029165 ENSMUST00000114700,ENSMUST00000031057 1 2 6 114 5 31205567 31207079 CACTCAGCTTATCAGGGAG 59 31207157 31207175 CTAATGCAAGGGATCCGAG 59 NA Nonspecific Mus musculus 50 Arpc1b ENSMUSG00000029622 ENSMUST00000110660,ENSMUST00000085679 2 2 2 100 5 145885556 145886457 AAGTGCAGGATCTTCTCTG 58 145886521 145886539 GATTCAAACATCAGCTCCC 58 NA Nonspecific Mus musculus 50 Cux1 ENSMUSG00000029705 ENSMUST00000065599 2 1 3 81 5 136732208 136732681 CTCTGTTCTATGGACCCTC 58 136732145 136732163 CTGGAGATGATGGAAAGCA 59 NA Mus musculus 50 Mkrn1 ENSMUSG00000029922 ENSMUST00000114823,ENSMUST00000031985 1 2 4 82 6 39350496 39351218 AGATCATAAAGTCCTGCCC 58 39350432 39350450 CTCTTCTTTCTCCTCCACC 58 NA Nonspecific Mus musculus 50 Chrna7 ENSMUSG00000030525 ENSMUST00000032738 3 1 2 81 7 70251076 70252447 GATCTCATGGGAATCCCTG 59 70251013 70251031 CTGTGTAGGTGACATCTGG 59 NA Mus musculus 50 Cckbr ENSMUSG00000030898 ENSMUST00000069707,ENSMUST00000033189 1 2 2 128 7 112582740 112582758 AACGTGTCCAACAAATGTG 59 112583125 112583143 TATCACCATCAAAGCGGAG 59 NA DesignNoJunction Mus musculus 50 Enox2 ENSMUSG00000031109 ENSMUST00000114911 3 1 6 102 X 46372067 46376317 ACGACAATTTACAGCAGGA 59 46371983 46372002 GATTTGACAGGATTGCTGAC 59 NA Mus musculus 50 Syp ENSMUSG00000031144 ENSMUST00000069520,ENSMUST00000116638,ENSMUST00000116637,ENSMUST00000033484 1 4 4 136 X 7225886 7225904 TTATCAACCCGATTACGGG 59 7226001 7228971 TTCACTGACCAGATTACATCTG 59 NA InUTR Mus musculus 50 Morc4 ENSMUSG00000031434 ENSMUST00000087401,ENSMUST00000033811 1 2 4 87 X 136370523 136371038 CAAGGCTAAGCAACAAGTC 59 136369101 136369121 CTTTGGTGGATTACTGAAGAC 58 NA Mus musculus 50 Star ENSMUSG00000031574 ENSMUST00000033979 1 1 2 81 8 26921861 26922271 TGTCATCAGAGCTGAACAC 59 26922314 26922334 CCAAGTGAGTTTAGTCTTGGA 59 NA Mus musculus 50 4933411K20Rik ENSMUSG00000031631 ENSMUST00000110376 2 1 2 80 8 47277980 47277998 TGTAAGACTGACCGATCAG 58 47278041 47280662 GTTGCTGCATTGTATATTCG 57 NA Mus musculus 50 Nek1 ENSMUSG00000031644 ENSMUST00000034065 2 1 2 106 8 63533322 63533341 AAGGACACTTAGCTGTAGAG 58 63533410 63551081 CAAATAAACCACGTGTCCT 57 NA Mus musculus 50 Mbtps1 ENSMUSG00000031835 ENSMUST00000081381,ENSMUST00000098362 2 2 2 80 8 122034274 122037781 GCACCCAGTAATCTTTGGA 59 122034212 122034230 ATTGGATCGAAAGTTGGGT 59 NA Mus musculus 50 Dbndd1 ENSMUSG00000031970 ENSMUST00000066198 2 1 2 238 8 126033835 126033853 GTTTCAGCTCATGAGACAG 58 126030612 126030630 AATGTGTCCACAATTGTCC 58 NA DesignNoJunction Mus musculus 50 Dbndd1 ENSMUSG00000031970 ENSMUST00000074879,ENSMUST00000066198 3 2 2 164 8 126039226 126039244 GACTCAGTAGTCACCAGAG 58 126033842 126033860 ATGAGCTGAAACATTCAGG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Cadm1 ENSMUSG00000032076 ENSMUST00000085909,ENSMUST00000114542 3 2 5 149 9 47626887 47637464 TACCATCATCACAGACACC 58 47656334 47656352 ATGATGAGCAAGCATAGCA 59 NA Nonspecific Mus musculus 50 Ilf3 ENSMUSG00000032178 ENSMUST00000067646,ENSMUST00000115414,ENSMUST00000115413 3 3 3 83 9 21193856 21193874 CTGCTCTGTAAGGAGAAGC 59 21193919 21196750 TTCTGTTACAGTAGTGAGCTG 59 NA Mus musculus 50 Stk36 ENSMUSG00000033276 ENSMUST00000042446 3 1 5 165 1 74655813 74657671 CCACCATTACAGTCATAACTG 58 74657798 74657816 TCAGCCATGAGTTTACAGG 59 NA Mus musculus 50 Ipo13 ENSMUSG00000033365 ENSMUST00000036156 1 1 2 99 4 117577856 117577874 TGATCATGTTCTGCACTGG 59 117577666 117577793 AGAATGTCATCCTGCAGTG 59 NA Mus musculus 50 Terf2ip ENSMUSG00000033430 ENSMUST00000052138 3 1 1 127 8 114539314 114539332 GACAACAAGCTGTTTGAGG 59 114541800 114541818 GTTTCTGAGTCTTCCTCGG 59 NA DesignNoJunction Mus musculus 50 Armcx2 ENSMUSG00000033436 ENSMUST00000113193,ENSMUST00000035559 1 2 2 80 X 131342253 131342781 GAATTCGGGTTCTTAGTCTG 57 131342192 131342210 GAATTAGGCCAGAGTTTCC 57 NA InUTR Mus musculus 50 Caskin1 ENSMUSG00000033597 ENSMUST00000024958,ENSMUST00000088474,ENSMUST00000115347 3 3 3 82 17 24633446 24633464 CAGTAAATGTCCCATCCGA 59 24633510 24633610 TAGCATCTCTGACACATCG 58 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111694,ENSMUST00000111678,ENSMUST00000099941,ENSMUST00000111685,ENSMUST00000111684,ENSMUST00000111691,ENSMUST00000111697,ENSMUST00000067232,ENSMUST00000036811 1 9 23 118 2 84453181 84453199 TCATCGTGAAATCCCACAG 59 84452695 84453099 AGAACCACTCATCTTTGCC 59 NA Nonspecific Mus musculus 50 Tmem63c ENSMUSG00000034145 ENSMUST00000038233,ENSMUST00000110187,ENSMUST00000110185 1 3 3 80 12 88416137 88416565 AAAGACATCATCTGGAAGC 57 88416608 88416627 GAACAGGAAGGTATTGATGG 57 NA Mus musculus 50 4732429D16Rik ENSMUSG00000034641 ENSMUST00000045075 2 1 1 60 11 114847423 114847441 CAAAGAAGTGACTCAGAGC 58 114845584 114845602 CAGGAAGTAGATGCTGCTC 59 NA DesignNoJunction Mus musculus 50 Dnaic2 ENSMUSG00000034706 ENSMUST00000069325,ENSMUST00000092469 2 2 2 88 11 114611802 114611821 TTTCTGACTGTTGGAGACTG 59 114611872 114613114 TAAGCCATGTGGTACTTGG 59 NA Mus musculus 50 Pabpc5 ENSMUSG00000034732 ENSMUST00000040961,ENSMUST00000113366,ENSMUST00000113368 2 3 3 60 X 117041848 117041866 AATGGTAAACCATTTCGCC 58 117041889 117041908 CTCCAGACTTTCTTAAACGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp661 ENSMUSG00000034800 ENSMUST00000110366,ENSMUST00000110368,ENSMUST00000077422 3 3 3 103 2 127404407 127404428 GATTCTTCAGTTCAAGAGAAGG 58 127403666 127404345 GCTTAGTTTCCAAGTCTAGAG 57 NA Mus musculus 50 Cd99l2 ENSMUSG00000035776 ENSMUST00000037391,ENSMUST00000080035 1 2 4 80 X 68694312 68703795 TCAGTAAAGCAGAGATGGG 58 68694250 68694269 CATAGGATTTGATGGTGCTC 58 NA Mus musculus 50 6030443O07Rik ENSMUSG00000036097 ENSMUST00000096053 2 1 2 124 19 45012900 45015959 GAACTTTCAGGCTCTAAACAG 58 45016044 45016063 CGCTTCTCTAGAAAGGACTC 59 NA Mus musculus 50 Igfbp7 ENSMUSG00000036256 ENSMUST00000046746,ENSMUST00000072884 3 2 2 120 5 77781028 77781046 GGATCACTCTGGAGTTCAG 59 77780368 77780944 TAGAGGAGATACCAGCACC 59 NA Mus musculus 50 Etl4 ENSMUSG00000036617 ENSMUST00000114614 2 1 12 132 2 20707082 20710061 GGAAATTCACAGTAAGGCAG 58 20710156 20710174 CTCCAGGTTTGGAATTGAC 58 NA Mus musculus 50 Rab8b ENSMUSG00000036943 ENSMUST00000041139,ENSMUST00000113722 3 2 2 153 9 66767321 66767339 CACCACCTTTATCTCCACC 59 66702544 66708653 CATAATTCCCATGGCTCCT 59 NA Mus musculus 50 BC037034 ENSMUSG00000036948 ENSMUST00000048421,ENSMUST00000110925,ENSMUST00000110924 3 3 3 113 5 138703537 138703651 ACAATGTCTGTCACCAGTC 59 138703442 138703460 ACAGGAAGTTGTGTTCCTC 59 NA Mus musculus 50 Rims2 ENSMUSG00000037386 ENSMUST00000110312,ENSMUST00000042917 2 2 5 122 15 39342909 39366391 AGATAGAGACAGGGATTGTG 58 39366476 39366494 GTATCAGGACGTTCAGAGG 59 NA Mus musculus 50 BC017647 ENSMUSG00000037750 ENSMUST00000073705,ENSMUST00000100782 3 2 2 276 11 77956708 77967210 TTCAGAAATGGGACACTACAC 59 77967447 77967466 TCAAAGTCCTTGAGTATGCT 58 NA DesignRelaxed Mus musculus 50 Mpp6 ENSMUSG00000038388 ENSMUST00000036225 2 1 2 80 6 50113626 50113648 GAGATACTATTACTCCTCAGCAG 59 50126913 50128403 GACACTTGACAAATACCTGAC 58 NA Mus musculus 50 Golga4 ENSMUSG00000038708 ENSMUST00000084820 1 1 2 111 9 118446054 118446372 AGATGAAGGAGCTTCATATGG 59 118447995 118448014 GTCTCGGTTATTACCATCCC 59 NA Mus musculus 50 March6 ENSMUSG00000039100 ENSMUST00000090227,ENSMUST00000043840 2 2 3 80 15 31405562 31408060 TCCCACTCAGGATATTTCTG 58 31405501 31405522 CTGGTAAAGTAAGGCAAATGAG 59 NA Mus musculus 50 Bach2 ENSMUSG00000040270 ENSMUST00000037416 1 1 4 89 4 32649762 32650150 TCTGTAAGTTCTCCTCTTCG 58 32650202 32650220 ACATTCCATCTCCCATCAG 58 NA Mus musculus 50 Lyrm5 ENSMUSG00000040370 ENSMUST00000111725,ENSMUST00000039729,ENSMUST00000111724,ENSMUST00000111726,ENSMUST00000111723,ENSMUST00000111721,ENSMUST00000111719 3 7 7 137 6 145163762 145163780 CGAGGAGAAGTACTGACTC 58 145163960 145163978 TTTGATCTTCTCTGGGTCC 58 NA DesignNoJunction Mus musculus 50 0610009K11Rik ENSMUSG00000041241 ENSMUST00000105813,ENSMUST00000044058,ENSMUST00000105814 3 3 4 112 4 137994175 137994193 AAGAAACACTCAACAGCCA 59 137994268 137994875 ATAGTCATTCCAAAGGTGGG 59 NA Mus musculus 50 Acot5 ENSMUSG00000042540 ENSMUST00000046422,ENSMUST00000072505 1 2 2 79 12 85414442 85414460 ACTTTGAGGAAGCTGTGAC 59 85416274 85416292 TTTGGAAATCCCTAGCAGG 59 NA DesignNoJunction Mus musculus 50 Tnp2 ENSMUSG00000043050 ENSMUST00000051297 1 1 1 74 16 10788425 10788443 CAGGAAGACCTTTGAAGGG 59 10788369 10788387 CTCTTAGCTCTGTGAGTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Bola3 ENSMUSG00000045160 ENSMUST00000055875 3 1 1 84 6 83301285 83301303 GAATGTTTGCCTCTCAGAC 58 83301351 83301369 ACTTGAATAGCTGTGGCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC022651 ENSMUSG00000046456 ENSMUST00000086364,ENSMUST00000086363 1 2 2 80 7 4675959 4675977 ATCTGTGGCTCTTATGCTC 59 4675500 4675916 GCAGATCCAAACAGTTAGAG 58 NA Mus musculus 50 Mrps7 ENSMUSG00000046756 ENSMUST00000058109,ENSMUST00000116321 1 2 2 98 11 115466137 115466155 GAAGTATGACCAGGAGCTC 59 115466217 115466345 GTGAATTTGCTGATGACCG 59 NA Mus musculus 50 Akap10 ENSMUSG00000047804 ENSMUST00000102650,ENSMUST00000058173 3 2 3 99 11 61706954 61706972 TCTTGGAGGGAATGTTTCC 59 61703841 61706891 CACACTAGACTGAGCAGTG 59 NA Mus musculus 50 EG624219 ENSMUSG00000047822 ENSMUST00000058777 1 1 1 60 9 21640504 21641290 GAATTTGAGACCTTAAAGGCTC 59 21641311 21641329 CAGTGAGAGCCCATAAGAG 59 NA DesignRelaxed Mus musculus 50 Cdca4 ENSMUSG00000047832 ENSMUST00000062092 3 1 1 60 12 114059824 114059842 ACCAGATATTTGAGACCCT 57 114059782 114059800 TCTGAGAAGAGTTCCTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mex3d ENSMUSG00000048696 ENSMUST00000105350,ENSMUST00000099480,ENSMUST00000062946 1 3 3 60 10 79844017 79844036 GAAGAGTGAACCAGAATGTC 58 79843976 79843995 AAAGATATGAATGGCTTGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Frmd3 ENSMUSG00000049122 ENSMUST00000098006 1 1 3 97 4 73833591 73833609 CAAGAGTTTCTCCAGGCTC 59 73833667 73847907 TTTATGGCATAGAGACTGACTC 59 NA Mus musculus 50 6030446N20Rik ENSMUSG00000049411 ENSMUST00000055447,ENSMUST00000092075 3 2 3 108 18 12276913 12276934 CCTACCCTACATTATTCCAAGG 59 12262681 12271913 ACATCAGATCTTGGACTGC 59 NA Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000099981,ENSMUST00000011934,ENSMUST00000111865 3 3 14 91 2 76748000 76759618 GGAGATGAAAGAAATTGCTAGC 59 76747930 76747949 GTGTTTCATTCGCATTAGGT 58 NA Mus musculus 50 H2-T24 ENSMUSG00000053835 ENSMUST00000116595,ENSMUST00000113760 1 2 3 106 17 36151574 36151592 CTGTAGTCCTCAAGCAACC 59 36143719 36151506 AGTTCTTTCTTCTGACCTGAG 59 NA Mus musculus 50 Krt15 ENSMUSG00000054146 ENSMUST00000107411 2 1 2 80 11 99993445 99993928 TATTGGTGTCAGAGAAGTATCC 59 99993386 99993405 CTGATATGGAAATTGCTGCT 58 NA Mus musculus 50 Gon4l ENSMUSG00000054199 ENSMUST00000090942 2 1 4 90 3 88691039 88691491 TCTTTGTCTCATGTTCAGCT 59 88691544 88691562 ATATTCTGGTGGTACTGGC 58 NA Mus musculus 50 Pla2r1 ENSMUSG00000054580 ENSMUST00000112525,ENSMUST00000067708 2 2 2 80 2 60271496 60279151 AACTATAAGTGCTTCCTGGTG 59 60271436 60271454 GACACAGAATTCCTGAGCA 59 NA Mus musculus 50 Zfp667 ENSMUSG00000054893 ENSMUST00000086327,ENSMUST00000108562 2 2 2 83 7 6245472 6245491 ATATCATCGCCTTGTTGGAG 59 6245537 6256201 TAGACCCTGATTCAGGACC 59 NA Mus musculus 50 Nfic ENSMUSG00000055053 ENSMUST00000105321,ENSMUST00000020461,ENSMUST00000105320 1 3 5 61 10 80868953 80870311 ACATAGAAGGAGGCATCTC 58 80868910 80868929 GTTGAATGGAGATTTGTCCA 58 NA DesignRelaxed Mus musculus 50 Pgpep1 ENSMUSG00000056204 ENSMUST00000070173 3 1 1 63 8 73175094 73175112 GTGTCTGTTACCATCTCCC 59 73174653 73174674 GCGATGTATAATACGTGAAGTC 59 NA DesignNoJunction Mus musculus 50 Tyw1 ENSMUSG00000056310 ENSMUST00000040213 1 1 3 102 5 130772664 130775784 GAGATCAGGAAGCTCACAC 59 130775850 130775868 AGAAATCCTTGAAGAGCGG 59 NA Mus musculus 50 Whsc1 ENSMUSG00000057406 ENSMUST00000075812,ENSMUST00000066854,ENSMUST00000058096 3 3 4 81 5 34211513 34221711 TTAACTGAGCATGAGGTCTC 59 34221755 34221773 CAGTCTGTGTTTCATCTGC 58 NA Mus musculus 50 Plac8l1 ENSMUSG00000059455 ENSMUST00000081374 2 1 1 70 18 42352249 42352267 CTCTTCAGTGTCTGCAGAG 59 42340034 42340052 TCACACTCAAGACACATGG 59 NA DesignNoJunction Mus musculus 50 Kng2 ENSMUSG00000060459 ENSMUST00000115349,ENSMUST00000039338,ENSMUST00000100046 2 3 3 80 16 23012236 23024924 AGATTACTCCAGGTAAGGG 57 23012174 23012192 GATTATCTGCCGATATGGG 57 NA Mus musculus 50 Tnfrsf19 ENSMUSG00000060548 ENSMUST00000111236,ENSMUST00000111234,ENSMUST00000077444 3 3 3 105 14 61624083 61643016 AGTTGTCCAAGGAATGTGG 59 61623996 61624014 CATGGCTTACACTTCTGGA 59 NA Mus musculus 50 1810073N04Rik ENSMUSG00000061306 ENSMUST00000103018,ENSMUST00000045402,ENSMUST00000076697,ENSMUST00000053692 3 4 4 84 11 119990568 119990586 CACTCCGGTTTAAAGTCCT 59 119989831 119990520 AGGATGGTTTCCACATTGG 59 NA Mus musculus 50 Ddhd2 ENSMUSG00000061313 ENSMUST00000033975 3 1 2 87 8 26848745 26848764 AGAGATCTTCAGGAAATGGG 58 26845574 26848697 CAGGGTCAAATGAATTCTTCC 59 NA Mus musculus 50 Btbd9 ENSMUSG00000062202 ENSMUST00000079924,ENSMUST00000114635 1 2 3 84 17 30654102 30654120 CATTGAGATCAAGCTTGGC 59 30650608 30654054 GTAGGAATAAGACCGGCTG 59 NA Mus musculus 50 Erbb4 ENSMUSG00000062209 ENSMUST00000097703 2 1 3 82 1 68305878 68337021 GACGGATAGAACTCCACTG 59 68305814 68305832 AGACAGCAAATGTCAAAGC 58 NA Mus musculus 50 Lilrb4 ENSMUSG00000062593 ENSMUST00000105480,ENSMUST00000102894 3 2 7 103 10 51201137 51201155 ATGACAGCCTCATATGCAG 59 51201221 51201382 TCATATGCTCCTGTCATCAC 59 NA Nonspecific Mus musculus 50 Atp11c ENSMUSG00000062949 ENSMUST00000033480 3 1 2 107 X 57489807 57489827 CACATGGTTGGCTATAATCCT 59 57478957 57489738 TCAAGATTCGGATTCCTGG 59 NA Mus musculus 50 Med14 ENSMUSG00000064127 ENSMUST00000096495 2 1 4 136 X 12257474 12257492 ATATGGCTTCAGGTACCAC 58 12254764 12257375 TATTGTGCATTCACCTTGTC 58 NA Mus musculus 50 Cldn19 ENSMUSG00000066058 ENSMUST00000094823,ENSMUST00000084309 2 2 2 177 4 118929493 118929511 CATATCCAGTCAGCACGAG 59 118929652 118929771 TCAAAGTACAGAGACCTGC 58 NA Mus musculus 50 OTTMUSG00000020946 ENSMUSG00000067773 ENSMUST00000097817 3 1 2 60 1 18250714 18250732 CTGAGTATGGTAGCTTGGA 58 18250672 18250691 AGTTTACAGTGACCTCTACG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc134 ENSMUSG00000068114 ENSMUST00000089174,ENSMUST00000100394 2 2 2 177 15 81965096 81965115 TAATTCCAACTGGAACCTCC 59 81965560 81971304 AGGAATAAACTCTGTCTGGTC 59 NA Mus musculus 50 Cgn ENSMUSG00000068876 ENSMUST00000107273,ENSMUST00000107272,ENSMUST00000090846,ENSMUST00000090847 3 4 4 109 3 94571204 94573094 ACTCAACAAAGAGCTGGAG 59 94571113 94571131 CATCAGCTACTTCCTTCCG 59 NA Mus musculus 50 Ssb ENSMUSG00000068882 ENSMUST00000090852,ENSMUST00000090851,ENSMUST00000112260 2 3 3 151 2 69704340 69704553 AAATTCAACAGGCTAAACCG 59 69704667 69704685 TACTCATCCGTCACTTCAG 58 NA Mus musculus 50 Ccnf ENSMUSG00000072082 ENSMUST00000115390 2 1 2 104 17 24388194 24388212 GATAGGTCATACGGAACGG 59 24386337 24388127 CCTACAATGGATCACTACCC 59 NA Mus musculus 50 4930488E11Rik ENSMUSG00000072955 ENSMUST00000101228,ENSMUST00000113071 2 2 2 86 X 133509995 133510014 CAGAAGTTGAAACGTTTGAC 57 133508770 133509947 GCTGGATAGTTTCATTCGAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Wdr57 ENSMUSG00000074088 ENSMUST00000105994 1 1 2 91 4 130045521 130045539 ACTTCCTTTGTGAACTCCT 58 130045594 130055303 ATGTCCCAAAGCTTAACTG 57 NA Mus musculus 50 Tox2 ENSMUSG00000074607 ENSMUST00000109428 1 1 3 80 2 163028994 163073516 GCAAGTTTGATGGTGACAG 59 163073560 163101714 TGTTATAGGTCTGGCTGGT 59 NA Mus musculus 50 EG633640 ENSMUSG00000074634 ENSMUST00000109199,ENSMUST00000099147 1 2 2 78 13 120281801 120281822 AGCTAGATCCCTATCTTTACAG 58 120283980 120283998 GATGGGTATCACAGTGGAG 59 NA DesignNoJunction Mus musculus 50 5033413D22Rik ENSMUSG00000075225 ENSMUST00000099932 3 1 3 90 10 41266800 41270536 CTGAAGCAGATGAGAAACC 58 41266728 41266746 CATAAAGCTGACTCTGCAG 58 NA Mus musculus 50 IGHG3 ENSMUSG00000076615 ENSMUST00000103422,ENSMUST00000103423 3 2 2 177 12 114599248 114599266 GGTTCTATTCCCTCAGCAG 59 114598625 114598742 CCCAAGATGTTACCAGGTG 59 NA Mus musculus 50 Ccdc24 ENSMUSG00000078588 ENSMUST00000106422,ENSMUST00000084325 2 2 2 60 4 117543674 117543692 TGACCAAGTTGTCAGACAC 59 117543139 117543157 GTTCTGCAACATGTGACAC 59 NA DesignNoJunction Mus musculus 50 Phyhd1 ENSMUSG00000079484 ENSMUST00000091132,ENSMUST00000102860,ENSMUST00000113647,ENSMUST00000113645,ENSMUST00000113648,ENSMUST00000113643 3 6 7 113 2 30125345 30125364 AAGATGAGCAACTTCAAACC 58 30130059 30130210 GGACCAAGAAATTTCCTTTCTC 59 NA Mus musculus 50 Zfx ENSMUSG00000079509 ENSMUST00000088102,ENSMUST00000113927,ENSMUST00000113926 2 3 4 80 X 91327304 91327504 GGAGAAGATGACTTAGGTGG 59 91327243 91327262 TGGATCGAGTAGTTCAACTC 58 NA Mus musculus 50 NM_001105180.1 ENSMUSG00000080150 ENSMUST00000116296 2 1 1 60 7 92095474 92095492 CATCCTCTCCTAAGTGACC 58 92095432 92095451 TGTTCTTTGGAGACATCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ckmt1 ENSMUSG00000000308 ENSMUST00000078222,ENSMUST00000000317 2 2 2 81 2 121186957 121188420 CTCAAAGAGGTGGAGAAGC 59 121188465 121188483 GACAGGTCAAGATGTAGCC 59 NA Mus musculus 50 Gpa33 ENSMUSG00000000544 ENSMUST00000060833,ENSMUST00000027847 2 2 2 90 1 168076915 168082707 AAGTCAGACGGAAAGAGTG 59 168082756 168082779 GTTAGATACTCTCACTCGATTCTC 59 NA Mus musculus 50 Krit1 ENSMUSG00000000600 ENSMUST00000080085,ENSMUST00000115493 1 2 2 80 5 3807387 3807405 TAGCACAAGGCATATTGGA 58 3807449 3809644 CTCGTTTCCCTTTAATCCC 57 NA Mus musculus 50 Haao ENSMUSG00000000673 ENSMUST00000000687 2 1 1 80 17 84234862 84234881 ATGTCCTCTTCGAGAAATGG 59 84234561 84234820 CAGAGTGGAAGAACTCTTGG 59 NA Mus musculus 50 Mnx1 ENSMUSG00000001566 ENSMUST00000001608 2 1 1 80 5 29801346 29801364 CTCAACAAGTACCTGTCTC 57 29800760 29801302 CCAAATCTTCACCTGAGTC 57 NA Mus musculus 50 Stk38l ENSMUSG00000001630 ENSMUST00000111644 1 1 2 130 6 146721928 146723932 CACATAAGGGAAAGACCAG 57 146724106 146724125 GTATTCGGCACTAGAAAGAG 57 NA Mus musculus 50 Rapsn ENSMUSG00000002104 ENSMUST00000111446 1 1 3 116 2 90876938 90876956 CTGGAGAGCTTTGAGAAGG 59 90877036 90883128 CTTCATGGACTCCTTGACC 59 NA Mus musculus 50 Tchp ENSMUSG00000002486 ENSMUST00000094441,ENSMUST00000065043 2 2 2 180 5 115159355 115159373 GAGGAAGATTCTGGAGCTC 59 115159517 115161270 TTCAGCAATCAGCTTCCTC 59 NA Mus musculus 50 Epdr1 ENSMUSG00000002808 ENSMUST00000002885 2 1 1 81 13 19685207 19686325 GCAAGATCCTATGAAACTTGG 59 19685146 19685165 TGTAGTTCCTGATGAAGGTC 58 NA Mus musculus 50 Arrdc2 ENSMUSG00000002910 ENSMUST00000002989,ENSMUST00000098656 1 2 2 191 8 73361173 73361191 CAGACACAGACCTTCATGG 59 73360911 73361018 CACGAAGACCTTGAGTGAG 59 NA Mus musculus 50 Grk5 ENSMUSG00000003228 ENSMUST00000003313 2 1 1 80 19 61063634 61063654 AAGAAGTGGAAGGAAATCCTG 59 61063692 61107668 GTAGTAATCTCTGTCTATGGTCC 59 NA Mus musculus 50 Csnk1g2 ENSMUSG00000003345 ENSMUST00000079773 3 1 3 196 10 80097378 80100643 TTCGCCTAGGAAAGAATCTG 59 80100883 80100901 GAAGGAAACATCCATGCTG 58 NA Mus musculus 50 Ghrhr ENSMUSG00000004654 ENSMUST00000063578 1 1 1 83 6 55335443 55335461 ATCTTCAACTTCCTGCCTG 59 55335508 55336814 AATGAAGCCCTGAAAGGAC 59 NA Mus musculus 50 Matk ENSMUSG00000004933 ENSMUST00000105328,ENSMUST00000105330,ENSMUST00000092281 1 3 3 115 10 80724433 80724451 GTACATTGTCATGGAGCAC 58 80724609 80724719 CTTCAGCAACATGAAGAGC 59 NA Mus musculus 50 Prss16 ENSMUSG00000006179 ENSMUST00000006341 1 1 1 83 13 22094928 22095022 TGTTAATGGAGACACAGATCC 59 22094865 22094884 CTAGGAATTAGAAGGGCTGG 59 NA Mus musculus 50 Vars ENSMUSG00000007029 ENSMUST00000087315 3 1 1 80 17 35148632 35148764 GATACCAGCACTTAAAGGGA 59 35148806 35148825 CTACAAAGTCATCGAAGACG 58 NA Mus musculus 50 Dio2 ENSMUSG00000007682 ENSMUST00000082432 3 1 1 75 12 91968429 91976519 TAGATGCCTACAAACAGGT 57 91968372 91968390 GATTCAGGATTGGAGACGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Adam21 ENSMUSG00000008438 ENSMUST00000008582 1 1 1 60 12 82660761 82660780 GTACAATCATCCAAGACCAG 57 82660720 82660738 AACCATACCATTCCCACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 6330569M22Rik ENSMUSG00000014601 ENSMUST00000064759,ENSMUST00000106707 1 2 2 80 3 107421282 107421301 AGGAAGTTGAACAAGTTCCT 59 107421061 107421242 TCAGAAGGGCAATCATATACTG 59 NA Mus musculus 50 Dll1 ENSMUSG00000014773 ENSMUST00000014917 2 1 1 115 17 15507868 15507886 GATGAGTGCATCCGATACC 59 15507649 15507791 GTACAGTAGTTCAGGTCTTGG 59 NA Mus musculus 50 B230208H17Rik ENSMUSG00000015087 ENSMUST00000058137 3 1 1 80 2 25440345 25440364 TGAAGAATGACTCCGATCTC 58 25439670 25440302 TGCTGTCTCTATCTTCGTC 58 NA Mus musculus 50 Mocs2 ENSMUSG00000015536 ENSMUST00000015680,ENSMUST00000050131 2 2 2 100 13 115614813 115614831 TAATACAGTTCACTGCCGA 58 115614893 115615429 TCTTGTAGTCCCTACAAAGAG 58 NA Mus musculus 50 Tubb1 ENSMUSG00000016255 ENSMUST00000016399 2 1 1 94 2 174282194 174282316 TGTTCATGGTAACTCTGGTG 59 174282373 174282391 TCCTTACCACATCCATGAC 58 NA Mus musculus 50 Vps53 ENSMUSG00000017288 ENSMUST00000056601,ENSMUST00000108419,ENSMUST00000094015 1 3 3 91 11 75860662 75861951 GATCCTTAAGGTGGTGATGG 59 75860590 75860608 AGGTTTCTGAGTTGCAGTC 59 NA Mus musculus 50 1700020C07Rik ENSMUSG00000017767 ENSMUST00000017911 3 1 1 61 2 164653171 164653189 GGGTTCTGCCAATATCCTC 59 164653128 164653146 GCAGATATCAGGTTGGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700081L11Rik ENSMUSG00000018412 ENSMUST00000106977,ENSMUST00000018556,ENSMUST00000106972,ENSMUST00000106971,ENSMUST00000106974,ENSMUST00000069188 3 6 7 84 11 104197585 104197604 AATGTGAGGAGATGGAAAGG 59 104196999 104197538 GATGACCTGTAAGACCTGC 59 NA Mus musculus 50 6330403K07Rik ENSMUSG00000018451 ENSMUST00000018595 3 1 1 60 11 70846600 70846619 CTCTCCATCTTCATCTACGC 59 70846559 70846578 TATAGGTGAAGATGCAGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc49 ENSMUSG00000018541 ENSMUST00000018685,ENSMUST00000107579 2 2 2 210 11 97624678 97627739 GAACCTGAAGAAGAGCTGG 59 97619087 97619105 ACCTTGGTACATCCAATCC 58 NA DesignNoJunction Mus musculus 50 Eapa2 ENSMUSG00000018656 ENSMUST00000069023 1 1 1 85 6 42543283 42543301 CAGATCTCAGCTACTTCCC 58 42542937 42543234 AGTTGTCATTGTCTGTGCT 59 NA Mus musculus 50 Dnahc1 ENSMUSG00000019027 ENSMUST00000048603 2 1 1 80 14 32077199 32077511 ATCCTGACAAGGTTCATCG 59 32077137 32077156 TCTGTAGGATGGATACTGGG 59 NA Mus musculus 50 Polr2i ENSMUSG00000019738 ENSMUST00000019882 2 1 1 113 7 31017422 31017518 TGTAATAACATGCTGTACCC 57 31017807 31017825 TTTGTTGACGTAGATGCAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Igfbp1 ENSMUSG00000020429 ENSMUST00000020704 3 1 1 121 11 7099908 7100776 TCAAGAAATGGAAGGAGCC 59 7100861 7100879 ATTCTTGTTGCAGTTTGGC 59 NA Mus musculus 50 Limk2 ENSMUSG00000020451 ENSMUST00000101642,ENSMUST00000102958,ENSMUST00000101638,ENSMUST00000093394,ENSMUST00000101640,ENSMUST00000110029 2 6 6 82 11 3246387 3247065 TTCTCTGTGAGATCATTGGG 59 3246324 3246342 AAGCTTAACATTGAGGCCA 59 NA Mus musculus 50 Trim11 ENSMUSG00000020455 ENSMUST00000108810 2 1 3 183 11 58801175 58802237 TAGCCAAGGACATTAAGGA 57 58803722 58803740 TCAGATAAGACCAGCTCAG 58 NA Mus musculus 50 Nrcam ENSMUSG00000020598 ENSMUST00000110751,ENSMUST00000020939,ENSMUST00000110750,ENSMUST00000110748 2 4 4 80 12 45648266 45648284 AATGAAAGCCACAAAGAGG 58 45648326 45650876 AATAATTGGAGTAGGTAGGCC 58 NA Mus musculus 50 Lig3 ENSMUSG00000020697 ENSMUST00000021039,ENSMUST00000092849,ENSMUST00000108174,ENSMUST00000080461 2 4 4 80 11 82610938 82611281 GAAGATCAGCAAGGATCCT 58 82611325 82611343 TCTGGGACGATAAAGTCAG 58 NA Mus musculus 50 Polg2 ENSMUSG00000020718 ENSMUST00000021060 3 1 1 171 11 106640289 106640307 AACTTCTGGGAAACTACGG 59 106638553 106638758 TTCACCAACTCTTGTAACAC 57 NA DesignRelaxed Mus musculus 50 Ddx5 ENSMUSG00000020719 ENSMUST00000106779 3 1 3 133 11 106648282 106648300 AAGTGGAATCTTGATGAGC 57 106644705 106647821 GAAGTTGGTCCTCTAACTG 57 NA Mus musculus 50 Rab37 ENSMUSG00000020732 ENSMUST00000067754,ENSMUST00000021076 2 2 2 96 11 115021030 115021049 TGGTGATTATGCTTCTAGGC 59 115021665 115021765 GGAACACCATATTCCCTGG 59 NA Mus musculus 50 Tshr ENSMUSG00000020963 ENSMUST00000021343,ENSMUST00000021346 2 2 2 80 12 92746172 92746191 ACAACCCTTACATGACTTCG 59 92746233 92750379 TGTTGTACAGTTTCAGGGTC 59 NA Mus musculus 50 Nfkbia ENSMUSG00000021025 ENSMUST00000021413 2 1 1 63 12 56590955 56591409 AATTCACAGAGGATGAGCT 58 56590910 56590928 TATAATGTCAGACGCTGGC 59 NA DesignNoJunction Mus musculus 50 AI413782 ENSMUSG00000021038 ENSMUST00000072744,ENSMUST00000021426 3 2 2 80 12 88604904 88604923 GAGGAATATTGGAACAGCTC 58 88601673 88604863 GGATTCCTTTAACTGTGAGAG 58 NA Mus musculus 50 Ryr2 ENSMUSG00000021313 ENSMUST00000021750 2 1 1 80 13 11843302 11844474 GAACACATTGAGGTGACCA 59 11843240 11843259 AGAACCAAAGGACTTCTGAG 59 NA Mus musculus 50 Prl ENSMUSG00000021342 ENSMUST00000018061,ENSMUST00000110369 1 2 2 85 13 27156305 27156735 TAATTAGCCAGGCCTATCC 58 27156784 27156802 TTCATCAACTCCCTGTAGG 58 NA Mus musculus 50 Fbp2 ENSMUSG00000021456 ENSMUST00000021907 3 1 1 91 13 62950869 62955344 TTTACAGAAAGACCACGGAG 59 62950797 62950815 ACCATACAGTGCATAACCC 59 NA Mus musculus 50 B4galt7 ENSMUSG00000021504 ENSMUST00000064701,ENSMUST00000100764 2 2 2 170 13 55705582 55705600 GGAAGAAGATGAGTCCTGG 59 55705733 55708566 CGATTGAACCTGAAATGGTC 59 NA Mus musculus 50 Ocln ENSMUSG00000021638 ENSMUST00000069756,ENSMUST00000022140 2 2 2 80 13 101281412 101281432 CCACTATGAAACAGACTACAC 58 101276263 101281371 ATAGGTGGATATTCCCTGAC 57 NA Mus musculus 50 2700060E02Rik ENSMUSG00000021807 ENSMUST00000022341 2 1 1 61 14 20631599 20631618 GCTTACCTGTTGCTTTAGAG 58 20631446 20631575 ATTAAGAACTGCATCGCCT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Arhgef3 ENSMUSG00000021895 ENSMUST00000049206,ENSMUST00000067296 2 2 2 80 14 28210852 28210871 AAGATTCTCTGATTGACAGC 57 28210914 28213463 AAACATGGAGTTTCACACC 58 NA Mus musculus 50 4930564B18Rik ENSMUSG00000022002 ENSMUST00000022579 2 1 1 81 14 76058741 76058759 TTTCAAGCAACATGCATGG 59 76058801 76063394 CTATCTTGGATTCATCTCCCAG 59 NA Mus musculus 50 4931414P19Rik ENSMUSG00000022179 ENSMUST00000022786 2 1 1 100 14 55204581 55204780 TCAGAAAGCATTAAGTCGTC 57 55204500 55204518 TTGTCTGTGTAATTGTGGG 57 NA Mus musculus 50 Bcl2l2 ENSMUSG00000022194 ENSMUST00000022806 2 1 2 115 14 55503556 55503574 AAGAAATGGAGCCTTTGGT 59 55504222 55504241 GTATAGAGCTGTGAACTCCG 59 NA DesignNoJunction Mus musculus 50 Jph4 ENSMUSG00000022208 ENSMUST00000022819 2 1 1 106 14 55728919 55728937 TACAACCCATGTTAGAGGC 58 55728573 55728592 CAGTCCATTCTCGTATACCC 59 NA DesignNoJunction Mus musculus 50 Rad21 ENSMUSG00000022314 ENSMUST00000022927 2 1 1 80 15 51804830 51805393 AAATGACTTTGGTGACTTCG 58 51804769 51804787 ACTAACATGTCGTCATCCT 57 NA Mus musculus 50 Slc30a8 ENSMUSG00000022315 ENSMUST00000037240 2 1 1 99 15 52163216 52165082 TACTCATGGAAGGTGTTCC 58 52165145 52165163 CAGATGTGTAGACTGTGCA 59 NA Mus musculus 50 Depdc6 ENSMUSG00000022419 ENSMUST00000096433,ENSMUST00000100660,ENSMUST00000023056 2 3 3 128 15 55043873 55047052 CCAAATCTGTGCTGAAGAG 58 55049754 55049772 GTTTACTTCCTCGTACCAC 57 NA Mus musculus 50 Srebf2 ENSMUSG00000022463 ENSMUST00000023100,ENSMUST00000100393 1 2 2 85 15 82015795 82015813 ATTGAGATCCACCTGACAG 58 82015860 82022652 CGATTTAAGAAGTAGCTAGCC 58 NA Mus musculus 50 Rapgef3 ENSMUSG00000022469 ENSMUST00000023109 2 1 1 86 15 97576090 97577499 GATCTCCACGTGTTCTGAG 59 97576022 97576040 TTGTCAATGACCTTCAGCT 59 NA Mus musculus 50 Ercc4 ENSMUSG00000022545 ENSMUST00000023206 1 1 1 82 16 13125513 13126494 GTCAGAATTCAGGTTGGCT 59 13126539 13126558 ATCTGGAACTCGGTAAACTC 59 NA Mus musculus 50 Retnlg ENSMUSG00000022651 ENSMUST00000065666 1 1 1 80 16 48873753 48873774 CCACTGTAACAAAGACTTTCTC 59 48873815 48874341 TGACAGTCATTCCAGAAGG 58 NA Mus musculus 50 Ccdc116 ENSMUSG00000022768 ENSMUST00000023452,ENSMUST00000115709 3 2 3 126 16 17144137 17144155 CTCAGGATATCTGGCTGAC 58 17142898 17142916 CATTGATGGTAGGTGTGGT 59 NA DesignNoJunction Mus musculus 50 Ccdc116 ENSMUSG00000022768 ENSMUST00000023452,ENSMUST00000115711,ENSMUST00000115709 1 3 3 174 16 17142557 17142575 ATTCCCATAGCAGCATCAC 59 17142273 17142291 GAGCAGGATTGATTCAGGA 59 NA DesignNoJunction Mus musculus 50 Gart ENSMUSG00000022962 ENSMUST00000023684 1 1 1 80 16 91623743 91624586 TGATATCTGGAACAGGGTC 58 91623681 91623701 CAAGAACAATATGTGAGGAGC 59 NA Mus musculus 50 Loh11cr2a ENSMUSG00000023186 ENSMUST00000001544 2 1 1 82 9 38545579 38546081 ACACAAAGCATTTGGAGAG 58 38546127 38546145 AATCTTCATCTAGCTCCCA 57 NA Mus musculus 50 Slc26a6 ENSMUSG00000023259 ENSMUST00000098376,ENSMUST00000098377 1 2 2 83 9 108761240 108761339 GAGTGGACCTGCTAATCTG 59 108761386 108761404 AGACTATGGAAACTGCCAG 58 NA Mus musculus 50 C1qdc2 ENSMUSG00000023571 ENSMUST00000024338 1 1 1 80 4 155340260 155340521 GCATCTACAGTCTGGACAG 59 155340565 155340583 CTGGAAGTGTTCTGGATGG 59 NA Mus musculus 50 Cul2 ENSMUSG00000024231 ENSMUST00000025073,ENSMUST00000080089,ENSMUST00000115872 2 3 3 80 18 3426209 3426322 CGTCTTTCAGAAGTTCTATGC 59 3426362 3426382 GCTTCTTCAGAATCCATAGAC 58 NA Mus musculus 50 Esco1 ENSMUSG00000024293 ENSMUST00000097670,ENSMUST00000025142,ENSMUST00000115865,ENSMUST00000115864,ENSMUST00000115863 1 5 5 84 18 10584351 10585984 AAAGAACAGGGATGTACCA 58 10584285 10584303 CAGTTTCAAGGACTTTGGA 57 NA Mus musculus 50 MGI:2137414 ENSMUSG00000024301 ENSMUST00000078961,ENSMUST00000077674 3 2 2 81 17 27061721 27062392 CTGTGAGAAAGAGGTGGAG 59 27062436 27062455 TGATCTCTTATTCTGGGCAG 58 NA Nonspecific Mus musculus 50 Snx24 ENSMUSG00000024535 ENSMUST00000025417 1 1 1 80 18 53542753 53542772 CAAACTCTTCCTTGACTTCC 58 53542815 53544285 GTCTCATCGAAAGATCCAC 57 NA Mus musculus 50 Ak3 ENSMUSG00000024782 ENSMUST00000025696 1 1 1 82 19 29101822 29112369 GTTGGATGGATTTCCAAGGA 59 29101759 29101780 CGTTGAGATTTATCACTGTGTC 59 NA Mus musculus 50 Rpp30 ENSMUSG00000024800 ENSMUST00000025714 2 1 1 81 19 36168946 36174671 TGTTAATGTGGCAATTGAGC 59 36174715 36174733 GTACCTTCTCATCGTTGCA 59 NA Mus musculus 50 Chuk ENSMUSG00000025199 ENSMUST00000026217,ENSMUST00000112015 3 2 2 81 19 44157077 44157095 GGAGACTTGATGGAGTCTC 58 44153464 44156442 TGTACAAGTGATCAGGAGG 58 NA Mus musculus 50 Clybl ENSMUSG00000025545 ENSMUST00000026625,ENSMUST00000110684 1 2 2 80 14 122778528 122778546 TGACTTCCGAGATGAAGAC 58 122778590 122783435 TGGATCACCTGTTTACCAG 58 NA Nonspecific Mus musculus 50 Nat1 ENSMUSG00000025588 ENSMUST00000026677 3 1 1 60 8 70015564 70015582 TTCACTGTTTAGTGGGCTC 59 70015604 70015624 TCTACATCGTCCTTATAGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rps6ka6 ENSMUSG00000025665 ENSMUST00000096348,ENSMUST00000065976,ENSMUST00000082034,ENSMUST00000113428,ENSMUST00000113427 2 5 6 82 X 108547996 108548803 TTTGAAAGTTCGAGACCGA 59 108547932 108547950 GCAGTTTGACGATAAAGGG 58 NA Mus musculus 50 Cplx2 ENSMUSG00000025867 ENSMUST00000026985 3 1 1 174 13 54480338 54480880 AGATCCGAGACAAGTATGG 58 54481018 54481036 TATTTGAGCACTGTGTCCA 58 NA Mus musculus 50 Thoc3 ENSMUSG00000025872 ENSMUST00000026990 3 1 1 105 13 54567616 54567634 AGCAGTTCAAGTTTGAGGT 59 54565193 54567547 AATTCTGGGTAGCTGAGGA 59 NA Mus musculus 50 Lactb2 ENSMUSG00000025937 ENSMUST00000027071 3 1 1 82 1 13637580 13640809 CAATAATGACACCACCTACTG 58 13637518 13637536 ATTGCTGTTCTCCATTTCC 57 NA Mus musculus 50 Slco5a1 ENSMUSG00000025938 ENSMUST00000115403,ENSMUST00000115402,ENSMUST00000047828 2 3 4 90 1 12911176 12911195 CGCTTTCATTACCTTCATCC 58 12884693 12911123 GACAATGATGACACCAGTG 58 NA Mus musculus 50 4930521A18Rik ENSMUSG00000026063 ENSMUST00000027230 3 1 1 60 1 31279868 31279886 GTGACATTGTCTTCTGCCT 59 31279910 31279928 CTTCTTCGGGATTGAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rev1 ENSMUSG00000026082 ENSMUST00000027251 2 1 1 80 1 38113611 38113629 ACATTCTGTCCGTGATCTC 59 38113299 38113567 GCAGCCAGAAATACTTCCT 59 NA Mus musculus 50 Rnf2 ENSMUSG00000026484 ENSMUST00000076110 2 1 1 80 1 153325712 153325731 ATGGAACTCAACCATTAAGC 58 153324147 153325669 CATCTGTTATTGCCTCCTG 57 NA Mus musculus 50 1700026L06Rik ENSMUSG00000026809 ENSMUST00000028152,ENSMUST00000102877 2 2 2 83 2 28551427 28551445 CATCTCCAGTATCGAGCAG 59 28549282 28549301 ATGAACATGATCAGAATCCG 57 NA DesignNoJunction Mus musculus 50 Lhx3 ENSMUSG00000026934 ENSMUST00000054099,ENSMUST00000028302 2 2 2 162 2 26058689 26059480 GACTTCTTTAAGCGCTTCG 59 26058545 26058563 CCATGAGGTAGAACTCGTC 59 NA Mus musculus 50 Rbms1 ENSMUSG00000026970 ENSMUST00000028347,ENSMUST00000112510,ENSMUST00000112509,ENSMUST00000074547 1 4 4 80 2 60680404 60680422 GACAAACCTCTACATCCGA 58 60635788 60680360 ATCTTCCCATATGGTTGGC 59 NA Mus musculus 50 Cd93 ENSMUSG00000027435 ENSMUST00000099269 3 1 1 86 2 148267314 148267332 AGAAGAAGCCTCAGAATGC 59 148266999 148267264 TTGGGCTGTACTGATTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Creb3l4 ENSMUSG00000027938 ENSMUST00000029547,ENSMUST00000107369 1 2 2 80 3 90041834 90041981 CTTCATGGAGTGATTTCCAG 58 90041773 90041791 TTTGGACTTTAGCACTGGA 58 NA Mus musculus 50 Dnajb4 ENSMUSG00000028035 ENSMUST00000050073,ENSMUST00000029669 3 2 2 71 3 151848342 151849394 AATTAGTTTACGGGAGGCA 58 151848289 151848308 ATAGGTAGGTTTCTTCCGTC 58 NA DesignNoJunction Mus musculus 50 2510027J23Rik ENSMUSG00000028133 ENSMUST00000039761,ENSMUST00000106467,ENSMUST00000106466 2 3 5 150 3 120859428 120861697 AGCAACATCAAGGAGTACC 59 120859198 120859216 CTTTGACTTCAAACGCCAG 59 NA Mus musculus 50 Lmo4 ENSMUSG00000028266 ENSMUST00000029933 1 1 1 109 3 143857448 143857466 TTATTTGGGAATAGCGGTG 57 143857002 143857376 GAACATGTGAAACACTTGAG 57 NA Mus musculus 50 4930500O09Rik ENSMUSG00000028492 ENSMUST00000070754 3 1 2 89 4 86133699 86133717 CCCAGAAATTCCTTCAAGC 58 86127562 86133646 TAACCTCGCTGTGATTCTG 59 NA Mus musculus 50 Sgip1 ENSMUSG00000028524 ENSMUST00000106882,ENSMUST00000066824,ENSMUST00000106874 2 3 9 166 4 102607168 102607186 CTCGTTTGGTTTGACAGAG 58 102628808 102634991 TTAACAATGCACTTGCTTGG 59 NA Mus musculus 50 1700012P22Rik ENSMUSG00000028589 ENSMUST00000030323 1 1 1 182 4 144013778 144028391 GTTCACCAAAGCCATTGAC 59 144009686 144009704 TAGGTGCTGATCAGATAGC 58 NA DesignNoJunction Mus musculus 50 4930538K18Rik ENSMUSG00000028642 ENSMUST00000030394 2 1 1 80 4 118886673 118886692 ATTATTAATGCCTTGGCCCT 59 118883565 118886630 ACAGTAGGATTTCCTGCTG 58 NA Mus musculus 50 Capzb ENSMUSG00000028745 ENSMUST00000102507,ENSMUST00000102508,ENSMUST00000030519,ENSMUST00000116268,ENSMUST00000030518,ENSMUST00000042675 2 6 6 92 4 138813287 138817906 GACTCCTATAGGTCACCGT 59 138817962 138817980 CTCTACCTCCAGCTTTCTG 59 NA Mus musculus 50 Pla2g2e ENSMUSG00000028749 ENSMUST00000030526 3 1 1 102 4 138308334 138309191 CATGATTGTCTGCACTGAG 58 138308250 138308268 GTTCCTGTATGGGTGATCC 59 NA Mus musculus 50 Srrm1 ENSMUSG00000028809 ENSMUST00000105861,ENSMUST00000084846,ENSMUST00000105862,ENSMUST00000030613,ENSMUST00000097847 1 5 5 80 4 134900578 134902661 CTGGAAGTGAAGAACCCAG 59 134900516 134900537 GAATTCTCTAGCATTCTTCCCA 59 NA Mus musculus 50 Cd164l2 ENSMUSG00000028865 ENSMUST00000030679,ENSMUST00000105910 1 2 3 217 4 132776976 132777369 CTAGCTGGTAAAGGAGCTC 59 132777650 132777668 TAGATTGAGCAACCCTCCT 59 NA DesignNoJunction Mus musculus 50 Sepsecs ENSMUSG00000029173 ENSMUST00000031069 3 1 1 81 5 53038891 53038909 ACCCAACTAAAGAAGTTGG 57 53038437 53038849 GTGTCATAGCTAAGGATATAGG 57 NA Mus musculus 50 Uchl1 ENSMUSG00000029223 ENSMUST00000031131 2 1 1 80 5 67073748 67073766 GTGTTTCGAGAAGAACGAG 58 67073891 67074941 ACTTTGTCATCTACCCGAC 58 NA Mus musculus 50 1700023E05Rik ENSMUSG00000029248 ENSMUST00000031161 1 1 1 94 5 77485099 77488387 TCCAAAGACCTTGGAAACC 59 77488443 77488463 CTATCTTAATCCTTGGGTGGG 59 NA Mus musculus 50 Ftsj2 ENSMUSG00000029557 ENSMUST00000031536 3 1 1 163 5 140807028 140807047 AGATGAATGAGAAGCATCAG 57 140804685 140804703 TATGTGAAGGAGATCGACC 58 NA DesignNoJunction Mus musculus 50 Srcrb4d ENSMUSG00000029699 ENSMUST00000111153,ENSMUST00000111152,ENSMUST00000111151 1 3 4 296 5 136442010 136443614 TGTGATGAATTCTTGCACAC 59 136441544 136441562 ATTGTCCAGCAGGATATGC 59 NA DesignNoJunction Mus musculus 50 MGI:2141532 ENSMUSG00000029817 ENSMUST00000031841 1 1 1 80 6 49201015 49202392 ATCAAAGTCCAGGTCAAGG 59 49200953 49200972 GATCGTCTCCTATGAGAGTG 58 NA Mus musculus 50 Cbx3 ENSMUSG00000029836 ENSMUST00000094623,ENSMUST00000031862,ENSMUST00000114446 2 3 3 60 6 51425321 51425339 GTGTAGTGAATGGGAAGGT 58 51425362 51428445 TTATCAGCATCTGTGAACCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 AI836003 ENSMUSG00000029875 ENSMUST00000031914 3 1 1 102 15 97998765 97998783 GAGATCATGACCAAGGACG 59 97998849 97998867 TCATACCGCCGTTATACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rho ENSMUSG00000030324 ENSMUST00000032471 3 1 1 158 6 115885638 115886630 CATGTTGAACAAGCAGTTCC 59 115886751 115886769 CTCCTACTTTCAGCCACAG 59 NA InUTR Mus musculus 50 Mtmr10 ENSMUSG00000030522 ENSMUST00000032736 3 1 1 87 7 71453026 71453045 ATAGCTCATTATTCCCAGCC 59 71453095 71458978 CCTTGTTGGCTGAATTGTG 59 NA Mus musculus 50 Tsc22d3 ENSMUSG00000031431 ENSMUST00000112996,ENSMUST00000112995,ENSMUST00000055738 1 3 3 60 X 137076649 137076667 GACAACAAGATTGAGCAGG 58 137075610 137075628 CTCTCACAGCGTACATCAG 59 NA DesignNoJunction Mus musculus 50 2410022L05Rik ENSMUSG00000031458 ENSMUST00000033839 3 1 1 86 8 13885191 13885673 TCCTTACGATGCTGATGAC 59 13885123 13885143 TATATCATGTCTCCCTGTGGT 59 NA Mus musculus 50 0710008K08Rik ENSMUSG00000031505 ENSMUST00000033901 2 1 1 81 8 11509492 11509510 CATAGTTACCACAAGGCCA 59 11509555 11510242 CCATAGGACTACTGAGCAC 58 NA Mus musculus 50 1700030J22Rik ENSMUSG00000031847 ENSMUST00000070577 2 1 1 151 8 119497434 119497452 AAAGGAGTCATGTCTGCTG 59 119496006 119496024 CTTCTTTGACCAGATGCAG 58 NA DesignNoJunction Mus musculus 50 Tradd ENSMUSG00000031887 ENSMUST00000034359 1 1 1 118 8 107783529 107783627 TACATCTTAGCCCAGAAGC 58 107783429 107783447 GAAGCTACCTGTATGGCTC 59 NA DesignNoJunction Mus musculus 50 Slc7a6 ENSMUSG00000031904 ENSMUST00000034378 3 1 1 81 8 108716314 108716332 CTGCCCTCTTCTCTTACTC 58 108716377 108717062 AAGGGCAAATTCCTTTCTG 58 NA Mus musculus 50 Tex12 ENSMUSG00000032065 ENSMUST00000034568 3 1 1 90 9 50366397 50366501 GATTTGAGCGATATGAGCA 57 50365568 50365587 TGTAAGATGCATCTACTGCT 58 NA Mus musculus 50 Hcn4 ENSMUSG00000032338 ENSMUST00000034889 3 1 1 82 9 58692035 58692053 TCACTAAGATCCTCAGCCT 59 58692099 58701198 GTGGAAGATCTCTTCCCAC 59 NA Mus musculus 50 Lactb ENSMUSG00000032370 ENSMUST00000034929,ENSMUST00000116554 1 2 2 175 9 66819166 66822535 CTGGTCAGAAGGTTTAGGC 59 66819009 66819027 GGAACTCGGGAACATAGTG 59 NA Mus musculus 50 Mobp ENSMUSG00000032517 ENSMUST00000035103 3 1 5 89 9 120077050 120077068 AGTACAGCATCTGCAAGAG 59 120077118 120089159 AGAACGTCATACTAGTCTTCTG 59 NA Mus musculus 50 Lama1 ENSMUSG00000032796 ENSMUST00000035471 3 1 1 80 17 68143656 68144546 AATAAGACAGACTTGATCTCCG 59 68144587 68144605 TTCCTTTAGAAACCGGGAC 59 NA Mus musculus 50 Acsl3 ENSMUSG00000032883 ENSMUST00000113521,ENSMUST00000035779,ENSMUST00000012393 3 3 3 85 1 78698020 78700064 TGTCTGAAGATCATTGACCG 59 78700112 78700130 AAAGCTGCCTCTACTTTCC 59 NA Mus musculus 50 Terf2ip ENSMUSG00000033430 ENSMUST00000052138 2 1 1 208 8 114536040 114539252 GAGAGCCACAGAACAAGAG 59 114541801 114541819 TGTTTCTGAGTCTTCCTCG 58 NA DesignNoJunction Mus musculus 50 Mtmr15 ENSMUSG00000033458 ENSMUST00000037476 1 1 2 163 7 71516537 71517156 CAGTTGTCAGCTAGTGGTC 59 71516392 71516411 CTTCTAACCGTACCTGTCTG 59 NA Mus musculus 50 Prss35 ENSMUSG00000033491 ENSMUST00000036426 2 1 1 60 9 86649289 86649307 TGAACAGTTGGTGTATCGG 59 86649330 86649349 CTGATACAGGAGGTCATTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 AW554918 ENSMUSG00000033632 ENSMUST00000036619 2 1 2 89 18 25503383 25503402 GTTTAAATCTCGAGAGCTGG 58 25503454 25558435 TTCCATAAGCTTGGTCCAG 59 NA Mus musculus 50 Pla2g4c ENSMUSG00000033847 ENSMUST00000108528,ENSMUST00000043612 1 2 2 80 7 13927768 13928729 GAAGTTTATAGAAGGACCAGTG 58 13928769 13928788 GCCATCACTAAATCCAAGAG 58 NA Mus musculus 50 Gpbp1l1 ENSMUSG00000034042 ENSMUST00000030460,ENSMUST00000054876,ENSMUST00000106475 3 3 3 80 4 116246118 116246949 GACTACGGGAGATTCTTGG 59 116246992 116247011 GCATATGCTCCCTTAGAGAC 59 NA Nonspecific Mus musculus 50 Mad2l1bp ENSMUSG00000034509 ENSMUST00000037890 3 1 1 65 17 46289750 46289768 CCTATGAACAGCTGAAGCA 59 46285209 46285227 CTTTCTTCCTTGCTGTGTC 58 NA DesignNoJunction Mus musculus 50 Mrpl34 ENSMUSG00000034880 ENSMUST00000048914 3 1 1 72 8 73988898 73988916 GGATATGGCTTTCCTAGCC 59 73988952 73989152 ATACCTGCCACTCAATAGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 2510012J08Rik ENSMUSG00000034889 ENSMUST00000050867 3 1 1 232 10 80785952 80785970 ACACTTTAAGACGTGGGAG 59 80786518 80786664 CCATGTACACCTGGATGTC 59 NA DesignRelaxed Mus musculus 50 Cobll1 ENSMUSG00000034903 ENSMUST00000112431,ENSMUST00000102726,ENSMUST00000112430,ENSMUST00000090896,ENSMUST00000072921,ENSMUST00000112422,ENSMUST00000068356,ENSMUST00000112432 2 8 9 75 2 64989077 64989095 TATTGAGCTCTCAGTGGTC 58 64974588 64989038 GTCCATCATTGGCTTACTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Cebpa ENSMUSG00000034957 ENSMUST00000042985 3 1 1 63 7 35905340 35905358 AGATAAAGCCAAACAACGC 59 35905385 35905403 ATTGTCACTGGTCAACTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rfpl4 ENSMUSG00000035191 ENSMUST00000045215 2 1 1 60 7 5062481 5066889 CAAGTAACCATGACCTTGGA 59 5062440 5062459 GGTCATCAGAGATGATGAGG 59 NA DesignNoJunction Mus musculus 50 Pdk3 ENSMUSG00000035232 ENSMUST00000045748 3 1 1 84 X 91029188 91034243 AGAATTCAATGCCAAAGCG 59 91029122 91029142 GAACAGCTCAAATAGCATGTG 59 NA Mus musculus 50 Prdm8 ENSMUSG00000035456 ENSMUST00000112959 2 1 1 94 5 98612515 98613485 CTTACATCTTCCGGGTAGAC 59 98613542 98613560 TTCTTCCTTATCTCGGGCT 59 NA Mus musculus 50 Dagla ENSMUSG00000035735 ENSMUST00000039327 3 1 1 82 19 10325610 10325629 TAACGAGGTGATCATCTCAC 58 10325037 10325565 TCTCCAGCACCTTATTGAG 58 NA Mus musculus 50 Ibtk ENSMUSG00000035941 ENSMUST00000039213,ENSMUST00000093806 3 2 2 80 9 85612671 85612689 GATGTCACCATGAAGTCTG 57 85612529 85612628 GTGGAAATACTCAAGTCTCG 57 NA Mus musculus 50 BC067068 ENSMUSG00000036009 ENSMUST00000046638 2 1 1 80 10 105260362 105263069 TATTGAAGATCTGGAGGACTG 58 105260302 105260322 GTAAATATCCGCAGAGTACTG 58 NA Mus musculus 50 Rorb ENSMUSG00000036192 ENSMUST00000112832,ENSMUST00000112834,ENSMUST00000040153 3 3 3 80 19 19052118 19052139 CCAACTTGTTTACCTATAGCTC 58 19036625 19052077 GTGCAATTCGATCGATCTC 58 NA Nonspecific Mus musculus 50 Siah2 ENSMUSG00000036432 ENSMUST00000099089 2 1 2 80 3 58480355 58495326 CCCTGTAAGTATGCTACCAC 59 58480294 58480315 GTATTCACAGATGTCTTCATGC 59 NA Mus musculus 50 Ddefl1 ENSMUSG00000036995 ENSMUST00000047526 1 1 1 94 4 135798785 135799369 TGTCAAATTCAGCTCAGAG 57 135799427 135799445 TTCTACTACACAGAGGCTG 57 NA Mus musculus 50 Taar9 ENSMUSG00000037424 ENSMUST00000041180 2 1 1 60 10 23828684 23828703 TGGTGTTTCTATATGGTCGG 59 23828643 23828661 CCCTCTATCTTCCTAGCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 H2-M11 ENSMUSG00000037537 ENSMUST00000041964 2 1 1 93 17 36684590 36684865 CTACAGTCTAACTGGATATCAC 57 36684918 36684937 GACTACTTCAAAGAATCCGT 57 NA Mus musculus 50 Cdkn1c ENSMUSG00000037664 ENSMUST00000037287 3 1 1 105 7 150644917 150645028 GAGATGAGTTAGTTTAGAGGCT 59 150644833 150644851 TACATGAACGAAAGGTCCC 59 NA InUTR Mus musculus 50 Prosapip1 ENSMUSG00000037703 ENSMUST00000045761,ENSMUST00000110260,ENSMUST00000089561 2 3 3 102 2 130461196 130461522 AAACTAAGTGGGAGGTGTG 59 130461112 130461131 ACGATCTCACTCAACTTCTG 59 NA Mus musculus 50 Slc32a1 ENSMUSG00000037771 ENSMUST00000045738,ENSMUST00000109483 1 2 3 87 2 158437350 158439553 GTGACAAATGCCATTCAGG 59 158439604 158439622 AGATGATGAGGAACAACCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Camk4 ENSMUSG00000038128 ENSMUST00000042868 2 1 1 121 18 33335878 33339160 ACCTACATCCTACTTTGTGG 58 33339244 33339262 AAAGACACTTCATCCCACC 59 NA Mus musculus 50 C730027P07Rik ENSMUSG00000038233 ENSMUST00000043011,ENSMUST00000098269 2 2 2 138 9 121886743 121887351 ATAGATGGGTTTCCAGAGTC 58 121887452 121887470 TCTCAAGGACATGCTTCAG 59 NA Mus musculus 50 Foxf2 ENSMUSG00000038402 ENSMUST00000042054 3 1 1 60 13 31722405 31722423 TCGTCCTCAATTTCAATGG 57 31722445 31722465 TGATAATAAGAGCCACTAGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fig4 ENSMUSG00000038417 ENSMUST00000043814 1 1 1 80 10 40952054 40953371 GCCTTACGATGAAGTTATCTG 58 40951994 40952014 TCAATCTCTTCTTCCCATCTG 59 NA Mus musculus 50 1700129I04Rik ENSMUSG00000038570 ENSMUST00000040353 3 1 2 61 7 89792344 89794163 TTAAGTCAGATTATCGCCCT 58 89792302 89792322 ATATTCTTCAGGTATGTGGCG 59 NA DesignNoJunction Mus musculus 50 C030046E11Rik ENSMUSG00000038658 ENSMUST00000063343 1 1 2 119 19 29615818 29636485 TATCCCAAAGGAAGTCCAC 58 29636568 29636586 ATACCTCATAATGGGTGCT 57 NA Mus musculus 50 Mrps34 ENSMUSG00000038880 ENSMUST00000043907 1 1 1 125 17 25032642 25032744 TTTCAAAGGGAAGAGTGAGG 59 25032832 25032850 AATCTGTCCTCTGGTTTCG 59 NA Mus musculus 50 Hrh3 ENSMUSG00000039059 ENSMUST00000056480 3 1 1 184 2 179837438 179837456 GATTCCTGTCAGTCACTCG 59 179835960 179835978 GAAGAACTCAGCATAGCAG 57 NA DesignNoJunction Mus musculus 50 Cpa4 ENSMUSG00000039070 ENSMUST00000049251 2 1 1 82 6 30530928 30530946 CCATTTGGTTGAATGCAGG 59 30530991 30531652 AGTTACAATCTTCCTCGCTG 59 NA Mus musculus 50 Rxrb ENSMUSG00000039656 ENSMUST00000044858,ENSMUST00000044956,ENSMUST00000116612 2 3 3 93 17 34169910 34169928 TCATCAGTTCTTCCATGGG 58 34169985 34170513 ACTGTGGAGTTGATCTGAG 58 NA Mus musculus 50 Dusp26 ENSMUSG00000039661 ENSMUST00000036631 3 1 1 136 8 32204715 32204733 TGAGCATCCACTTTCAGAC 59 32206718 32206737 GTGATACAGCATGAGGTAGG 59 NA DesignNoJunction Mus musculus 50 Ptger3 ENSMUSG00000040016 ENSMUST00000071906 3 1 2 61 3 157268068 157268088 ATCTGCTGCTAAGAAAGATCC 59 157304687 157304705 ATAGTTGGTGTGGTCTCTG 58 NA DesignNoJunction Mus musculus 50 Flywch1 ENSMUSG00000040097 ENSMUST00000115465 2 1 3 121 17 23899208 23899228 CTCACAAGCATTGAAACCC 59 23898054 23898072 TCTTCAGGAACTCAAGAGG 58 NA DesignNoJunction Mus musculus 50 Maob ENSMUSG00000040147 ENSMUST00000040820 1 1 1 80 X 16301831 16301850 GAAGCTCCAATTGCATACAC 59 16300100 16301789 GTGAGCAAGGATAAATCCCA 59 NA Mus musculus 50 Nsmce4a ENSMUSG00000040331 ENSMUST00000035253 1 1 1 82 7 137677368 137679048 GCCAATAATAGAGCCAGTG 57 137677304 137677324 GAGCTATAATTCCTTGACTCC 57 NA Mus musculus 50 B430201A12Rik ENSMUSG00000040339 ENSMUST00000046924 2 1 1 80 3 108783204 108784073 CCAAAGTATCAGGCTATAGCA 59 108783144 108783163 CCACTGAGGTATTTCTCCTG 59 NA Mus musculus 50 Cyp2b9 ENSMUSG00000040660 ENSMUST00000082214 3 1 1 86 7 26985867 26985885 AGATCTTGTCCCAATTGGT 58 26985935 26986123 TACACCTCAGTGTTCTTGG 58 NA Mus musculus 50 Rcsd1 ENSMUSG00000040723 ENSMUST00000040357,ENSMUST00000097474 3 2 2 140 1 167585548 167585566 GTACTACTATCGCAGAGCC 59 167580332 167585444 GGATGTCATCCATGGAGAC 59 NA Mus musculus 50 Nbeal1 ENSMUSG00000041003 ENSMUST00000035569 2 1 1 80 1 60281564 60287453 CAGAACTGCAAGGTATTCCA 59 60287496 60287514 ACTCTTCATCACTGCTGTC 59 NA Mus musculus 50 Hectd2 ENSMUSG00000041180 ENSMUST00000047247 2 1 1 80 19 36678839 36679667 CTTGATGAGTTAACCCGGA 58 36679710 36679729 CATATCCAAACCAGCTTCAC 58 NA Mus musculus 50 Chrnb1 ENSMUSG00000041189 ENSMUST00000045971 1 1 1 81 11 69607704 69607722 CATGATGGCATCGATTCTC 58 69607484 69607659 TTCCGTCATTGTTGTTCAG 58 NA Mus musculus 50 Tox ENSMUSG00000041272 ENSMUST00000039987 1 1 1 81 4 6624934 6638614 TGTATCCAAGAGCTACACTG 58 6624872 6624890 GAATACTGACGGCTTTGAG 58 NA Mus musculus 50 Ccnb1 ENSMUSG00000041431 ENSMUST00000072119,ENSMUST00000091295 3 2 2 83 13 101549735 101549989 CACAAAGCACATGACTGTC 59 101549670 101549688 AGTGTACAGTTCAGCTGTG 59 NA Nonspecific Mus musculus 50 Syt15 ENSMUSG00000041479 ENSMUST00000035351 3 1 1 110 14 35036316 35038102 CATCTTCCAGGTATCCAGC 59 35038176 35038194 AATGGGAATAGCACCTGTC 59 NA Mus musculus 50 BC006662 ENSMUSG00000041625 ENSMUST00000110679 1 1 2 136 14 123290939 123290957 CATTCACATGGCTTAGCAG 58 123215836 123290839 TTCCAGTTTCCTGTCACAC 59 NA Nonspecific Mus musculus 50 Wdr41 ENSMUSG00000042015 ENSMUST00000056512,ENSMUST00000046437 2 2 2 81 13 95748470 95748490 TATACTGAACTGCTGGTACTG 58 95748533 95765215 CAGATGCAAACCTGAAGTC 58 NA Mus musculus 50 Galnact2 ENSMUSG00000042042 ENSMUST00000049344 2 1 1 82 6 118076344 118078720 CATAGAAGGCTATTATCGCAC 58 118076282 118076300 TGTACTCCATAAGGTCTGC 58 NA Mus musculus 50 2010015L04Rik ENSMUSG00000042233 ENSMUST00000105622,ENSMUST00000105623,ENSMUST00000094408,ENSMUST00000050128 2 4 4 87 4 154808483 154810835 AATGTTCTCTGTCCCTTGAC 59 154810885 154810903 TTGGTCAGTGTGATGATCC 59 NA Mus musculus 50 Eif2c4 ENSMUSG00000042500 ENSMUST00000084285,ENSMUST00000084289,ENSMUST00000084286 3 3 3 80 4 126194672 126194690 CACCTGAATGAAGTCCCAG 59 126194441 126194629 TGGAGTGTACCTCATAGAGG 59 NA Mus musculus 50 Mum1l1 ENSMUSG00000042515 ENSMUST00000113045,ENSMUST00000113043,ENSMUST00000046931,ENSMUST00000113042,ENSMUST00000113041,ENSMUST00000113040 2 6 6 60 X 135769682 135769700 GGACTCTGCTTCCATACTG 59 135769723 135769742 CAACTTATCATCGGTCATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 9930038B18Rik ENSMUSG00000042976 ENSMUST00000062469 1 1 1 60 12 8883130 8883149 CTACAGTGCCTGTACTAGTG 59 8883089 8883109 CTGGAGAAGTTATCTTGACTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Magea10 ENSMUSG00000043453 ENSMUST00000088481 1 1 1 185 X 69629757 69630521 CAATCAAGGACATTGGTCTC 58 69628694 69628712 ATACATCTCCTACGCTTCC 58 NA InUTR Mus musculus 50 E430028B21Rik ENSMUSG00000043702 ENSMUST00000052932 2 1 1 69 14 27485437 27485866 AAGGTGGATACATTCGTCTC 59 27485387 27485405 AGATCACGTGAGACATGTC 59 NA DesignNoJunction Mus musculus 50 Ctla2a ENSMUSG00000044258 ENSMUST00000021880 1 1 1 169 13 61037335 61037354 GAATGGAAGACGAAATTTGC 58 61036803 61036915 TCTTCTGGAGTCAAGTCAC 58 NA Mus musculus 50 Tmem46 ENSMUSG00000044461 ENSMUST00000053949 2 1 1 63 14 60248813 60248831 GTACTCAACTGTCAGCAGG 59 60248858 60248876 ATGGAGTATGCAGGTACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 9130011J15Rik ENSMUSG00000044600 ENSMUST00000058733 1 1 1 60 8 75092791 75092810 TATTTCCGGATCTTCATCGC 59 75091703 75092768 ACAGTACGATCATGCAGAG 59 NA DesignNoJunction Mus musculus 50 EG238564 ENSMUSG00000044951 ENSMUST00000057428 2 1 1 80 13 32807771 32807791 AATTTCAGGATATCTCGGAGG 59 32804689 32807730 TGGCACTTATTCTCCAACTC 59 NA Mus musculus 50 Olig3 ENSMUSG00000045591 ENSMUST00000053225 2 1 1 60 10 19076439 19076458 ATTCTGATTCGAGCTCTGTC 59 19076480 19076499 AGGTACATCTCATCCATGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 AU021034 ENSMUSG00000045655 ENSMUST00000066437 1 1 1 85 14 78484923 78484941 GATTTATGACTCCAGGCCC 59 78482755 78484874 TGATGTAACCCAGATGCTG 59 NA Mus musculus 50 1700101I19Rik ENSMUSG00000045815 ENSMUST00000062557 3 1 1 118 1 34636342 34636360 TGGCTTTGTTCTAGCTCTC 59 34636242 34636260 TGTAGTCTCCGGGTATACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 D230002A01Rik ENSMUSG00000046413 ENSMUST00000062522 2 1 1 120 8 94328681 94328699 ATCCTTCAGCTTCTTGCAG 59 94329238 94329256 CAAATGTGAATTCCTCCCG 58 NA DesignNoJunction Mus musculus 50 Olfr905 ENSMUSG00000046455 ENSMUST00000051111 3 1 1 60 9 38280535 38280554 TTTGTTGACCTCTGGTACTC 59 38280576 38280595 CTGATATAAAGCTCTCCAGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Scn4b ENSMUSG00000046480 ENSMUST00000060125 3 1 1 112 9 44954919 44955758 ATCCAGGATTCTCATCGAC 58 44955834 44955852 TATTCGTCTTCTCCTTGGT 57 NA Mus musculus 50 V1ri9 ENSMUSG00000046932 ENSMUST00000057516 3 1 1 61 13 22311524 22311543 TTTGTATGCAGTCATCATGG 58 22311482 22311500 CCAAGTGGATGAGAATGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Csl ENSMUSG00000046934 ENSMUST00000056085 3 1 1 60 10 99221221 99221240 ATGAAGACTGTATGGACCTG 58 99221180 99221198 TTCCGGTAGATCTTTGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1110032F04Rik ENSMUSG00000046999 ENSMUST00000054551 3 1 1 161 3 68674095 68674113 GACTCACTGTTGGATAGTG 57 68674238 68674256 CATGGACTCCTCATAGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 D030056L22Rik ENSMUSG00000047044 ENSMUST00000062753,ENSMUST00000055792 3 2 2 83 19 18791742 18791760 CAGTATTGGAGGAACCCTC 59 18791807 18791825 CTCAAGTGTCTCTGTCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dusp28 ENSMUSG00000047067 ENSMUST00000060913 1 1 1 131 1 94803993 94804152 CCTTCCAGATGGTGAAGAG 59 94804247 94804265 CTTACTCCGGATCAATGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tas2r139 ENSMUSG00000047102 ENSMUST00000057686 3 1 1 60 6 42091121 42091139 GTATCCAGAATAGGCCTCC 58 42091163 42091181 CGTTGAATATGGAGGAGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 1700001C19Rik ENSMUSG00000047150 ENSMUST00000061885 1 1 2 83 17 47570341 47570359 AAGTCTCGTTCAGCTTCAG 59 47550835 47570294 CTGTGAATCCTGGAAAGCA 59 NA Mus musculus 50 Hist1h2bg ENSMUSG00000047246 ENSMUST00000051091 2 1 2 111 13 23677455 23677473 CTGTCACCAAGTACACCAG 59 23677362 23677380 TAAGAACAAGCGCATAGCT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Flrt2 ENSMUSG00000047414 ENSMUST00000057324,ENSMUST00000110117 2 2 2 60 12 97017682 97017702 ATATCAGACATGGCCTTTCAG 59 97017724 97017742 GATTCCCATCCACGATCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxo28 ENSMUSG00000047539 ENSMUST00000051431 1 1 1 80 1 184256433 184256452 TGTCACTGTTGAATATGACC 57 184248124 184256391 TCTCATCAATCACCTTTCCT 58 NA Mus musculus 50 Ccdc125 ENSMUSG00000048924 ENSMUST00000057325 2 1 1 90 13 101448076 101448095 ACCAGTTTCCAGTATTCCAG 59 101448147 101449280 AGTTAGAATCTGTGCTGCTC 59 NA Mus musculus 50 Plcxd3 ENSMUSG00000049148 ENSMUST00000096507 3 1 2 245 15 4325797 4325815 ACCAATTTAGCCATCCCAG 59 4466736 4466754 TGAGTGGCTAACCATTTCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Ccdc71 ENSMUSG00000049305 ENSMUST00000061209 3 1 1 65 9 108366122 108366140 CAAACCCTGATCAAAGCTG 59 108366169 108366187 CCTTACTGTCTTGGTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rarres1 ENSMUSG00000049404 ENSMUST00000054825 1 1 1 80 3 67294889 67294909 GATTATCGGCTTTACAAGCAG 59 67289181 67294848 AATGTGTCCATGACTGTCAG 59 NA Mus musculus 50 Rarres1 ENSMUSG00000049404 ENSMUST00000054825 2 1 1 80 3 67294891 67294910 GGATTATCGGCTTTACAAGC 59 67289182 67294848 ATGTGTCCATGACTGTCAG 59 NA Mus musculus 50 6030446N20Rik ENSMUSG00000049411 ENSMUST00000050228,ENSMUST00000055447,ENSMUST00000092075 2 3 3 84 18 12233130 12233148 CATCGCTCTCAAAGATCTG 57 12226845 12228597 TCTGGATCAAACTGAGAGTC 58 NA Mus musculus 50 Tmc8 ENSMUSG00000050106 ENSMUST00000106334,ENSMUST00000050874 2 2 2 115 11 117646571 117647708 ATGAACTGAAGATGGAGCT 58 117647787 117647805 CACAATGAGGATGTTGGTG 58 NA Mus musculus 50 Bpil2 ENSMUSG00000050108 ENSMUST00000105305,ENSMUST00000061699 3 2 2 80 10 85423280 85424750 TGAAGTTCTTGAGGGTTACC 59 85423219 85423237 CTGTTCAGATTTGGCTGTG 59 NA Mus musculus 50 Snip1 ENSMUSG00000050213 ENSMUST00000052183 1 1 1 88 4 124748905 124748923 CTCAAAGCAACATGCAGTC 59 124749950 124749968 TAATGTAGGGCTTCACCCT 59 NA DesignNoJunction Mus musculus 50 Lgals3 ENSMUSG00000050335 ENSMUST00000022388 3 1 1 62 14 48001316 48001334 ATGCTGATCACAATCATGG 57 48001357 48004295 CCTGAAATCTAGAACAATCCTG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 BC030183 ENSMUSG00000050493 ENSMUST00000052835 1 1 1 66 4 129254449 129254467 AAAGTGGACCAAGTCTGTC 59 129254401 129254419 CTAACTCCATCTCCAGCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Vamp8 ENSMUSG00000050732 ENSMUST00000059983 2 1 1 100 6 72338323 72338341 TTATGACCCAGAATGTGGA 57 72335633 72338259 CTTGAAGTGTTCAGACGTG 58 NA Mus musculus 50 9930021J17Rik ENSMUSG00000051000 ENSMUST00000062080 2 1 1 119 3 85469364 85469382 AGTTTGCTTCTGTGGAGAG 59 85465129 85469281 CCTGAATGGGATCTTTGGT 59 NA Mus musculus 50 NP_001032931.1 ENSMUSG00000051262 ENSMUST00000050780 2 1 1 226 6 85715514 85715532 GAACTCTTCAAGGGCAGAG 59 85712610 85712628 TTCAGGTGTAGTCAACTGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 9430067K14Rik ENSMUSG00000051344 ENSMUST00000097713 3 1 1 102 1 64969047 64984280 GGAAATACAGAACACAAGCA 58 64968964 64968982 GTTCTGCATAACAGCTCTG 58 NA Mus musculus 50 Hspb3 ENSMUSG00000051456 ENSMUST00000054650 3 1 1 60 13 114453296 114453314 AACCAAAGATTTGTCTGCC 58 114453254 114453272 ATCTTTGACTTCCACCACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000052098 ENSMUSG00000052098 ENSMUST00000063789 1 1 1 60 4 139878539 139878557 GAGAGTTCAAGAGGAGGAC 58 139878497 139878516 AGAACATGTGAAAGATCCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 BC004004 ENSMUSG00000052712 ENSMUST00000064709,ENSMUST00000064683 3 2 2 87 17 29433556 29433574 TACCCAACTTCCATTTCCA 58 29433625 29435595 CTTATGCATCTTGCTACCC 57 NA Mus musculus 50 Rbmy1a1 ENSMUSG00000052831 ENSMUST00000100360 2 1 1 60 Y 2095496 2095515 GACTATGGCAATTACCACTC 58 2095538 2096831 CAGCATGATCACTGAAGAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Dnahc6 ENSMUSG00000052861 ENSMUST00000114040,ENSMUST00000064948 1 2 2 80 6 72988818 72991018 TCACGGATCCAAATCAGAC 59 72988756 72988774 CTGTCACAGGAAATGTGGA 59 NA Mus musculus 50 EG332993 ENSMUSG00000053121 ENSMUST00000065372 1 1 1 167 5 30062342 30062360 TTTACATAGGCGAAGGTGG 59 30062193 30062211 GAATCCACTGTGTCAGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fes ENSMUSG00000053158 ENSMUST00000082267,ENSMUST00000080932 2 2 2 88 7 87529134 87529153 GAAGCTGAAGACTCAGTACC 59 87528892 87529083 CTCGATCCTTGTCTTTGCT 59 NA Mus musculus 50 Rab4b ENSMUSG00000053291 ENSMUST00000093040 3 1 1 92 7 27960899 27961184 GAATAAGTTCAAACAGGACTCC 58 27960828 27960849 ATCTGTAGTTTCACAGTCTTCC 59 NA Mus musculus 50 Fpgt ENSMUSG00000053870 ENSMUST00000066568 1 1 1 60 3 154751031 154753091 CTGCTAATCCACTCTGGTG 59 154750989 154751007 TCTTTCCTAAAGCACTCGC 59 NA DesignNoJunction Mus musculus 50 2810030E01Rik ENSMUSG00000054074 ENSMUST00000091420 2 1 2 128 2 17969370 17969388 AAACTATGAAACTGCCCAG 57 17968999 17969017 AGATGAAACCTCTCCAAGC 59 NA DesignNoJunction Mus musculus 50 Ugt1a1 ENSMUSG00000054545 ENSMUST00000113138,ENSMUST00000113135,ENSMUST00000113137,ENSMUST00000113134,ENSMUST00000014263 1 5 11 250 1 90035888 90035906 GAAGGGAAAGCTGACTCAG 59 90112451 90112724 TCTTTGGATGACCAAGCAG 59 NA DesignRelaxed Mus musculus 50 EG634650 ENSMUSG00000054588 ENSMUST00000100961,ENSMUST00000065588 2 2 2 60 5 105650949 105650967 TATGCCAAGATCAAGACCC 59 105650114 105650927 GAATCCCTAGTTTATTCCCAG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Olfr63 ENSMUSG00000054666 ENSMUST00000067840 2 1 1 60 17 33406305 33406323 GCCTGGTCTTCATTATCCT 58 33406347 33406365 GATGGGATTCTCAAGATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ankrd24 ENSMUSG00000054708 ENSMUST00000011420,ENSMUST00000092277 3 2 2 85 10 81105093 81105112 ATAGTTGCTTCCCTACAGGA 59 81105160 81105275 AACTCCTCAAGGATCTGGA 59 NA Mus musculus 50 Ifltd1 ENSMUSG00000054966 ENSMUST00000111706,ENSMUST00000111708,ENSMUST00000068290 2 3 3 125 6 145368390 145375814 GCCAATTTACATCCAGTTCTC 59 145368285 145368303 GCTGAAGAATGTGGTTTCC 59 NA Mus musculus 50 2700049P18Rik ENSMUSG00000055184 ENSMUST00000068613 3 1 1 81 1 133430444 133430462 AACAATGGACACTTCTGGA 58 133430506 133435426 GTAGGAGGTTTACACCAGTG 59 NA Mus musculus 50 1700034H15Rik ENSMUSG00000055833 ENSMUST00000110852,ENSMUST00000069573 2 2 2 70 1 193724776 193724795 CAAGGCTGTGAATTTGTGAG 59 193724725 193724743 AATTTCTTAGCTGCATGGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Tceb2 ENSMUSG00000055839 ENSMUST00000069579 3 1 1 117 17 23965901 23965919 CAAGACCACCATCTTTACG 58 23964532 23965820 CTGGTCATCCTTGTAAAGC 58 NA Nonspecific Mus musculus 50 V1rc2 ENSMUSG00000058108 ENSMUST00000077593 3 1 1 60 6 58257737 58257758 CAACTTAAGTGAAACCAACCAG 59 58257776 58257797 GTTCTTTGGTAAGAGTGTACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tessp3 ENSMUSG00000058398 ENSMUST00000077549 1 1 1 80 9 110731277 110731895 CAGAACGAAATTGATGCAGG 59 110731938 110731956 GTTACAGTGCTTCTGGAGG 59 NA Mus musculus 50 Olfr340 ENSMUSG00000058803 ENSMUST00000072854 2 1 1 60 2 36308510 36308530 TTATGAGTGAGAACCTCTGTG 59 36308550 36308570 TTGGCAGTAGATAAAGTCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:99543 ENSMUSG00000059047 ENSMUST00000079797 1 1 1 80 X 27228810 27228829 GTCCGAATGTAGTCAGAGTC 59 27228430 27228768 TCCATGTTCATCAAACCCTC 59 NA Nonspecific Mus musculus 50 Olfr961 ENSMUSG00000059106 ENSMUST00000076548 2 1 1 60 9 39455066 39455084 CCTGTCATCGTCATCTACC 59 39455107 39455126 TCTGAATAATCGCACTAAGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pop5 ENSMUSG00000060152 ENSMUST00000081497,ENSMUST00000116505 1 2 2 85 5 115690251 115690271 CCTTTCATCACCTATTTGGAG 58 115690318 115690497 CAGGTTCTGATGGTACCTC 59 NA Mus musculus 50 AI449175 ENSMUSG00000060427 ENSMUST00000074982 2 1 1 93 8 72137342 72137654 TGATACAGGATGTGAATGGG 59 72136330 72136349 GTATTCAGAGTGAGTGACGA 58 NA Mus musculus 50 Plekhh1 ENSMUSG00000060716 ENSMUST00000039928,ENSMUST00000021546 3 2 2 81 12 80180021 80180039 TAGATCCATTCCAGACCAG 57 80180084 80180433 TTCTGTAATCTTGGGAGCA 58 NA Mus musculus 50 Haghl ENSMUSG00000061046 ENSMUST00000077938 3 1 1 80 17 25920773 25920791 AGTTTGCACAGAAAGTGGA 59 25920509 25920527 TATCCTCGTCATCCCTCTC 59 NA DesignNoJunction Mus musculus 50 Maml3 ENSMUSG00000061143 ENSMUST00000082294 3 1 1 92 3 51494771 51496130 AACCAGTTTCAAGGTTCAC 58 51494697 51494715 ATTCTGTGCAATCAACCTC 58 NA Nonspecific Mus musculus 50 V1rc31 ENSMUSG00000061481 ENSMUST00000075534 1 1 1 60 6 56974538 56974558 TTGTTGTCCTATACTGGATGG 59 56974498 56974519 TACATCCGTAACATTTCTGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Serpinb2 ENSMUSG00000062345 ENSMUST00000009356,ENSMUST00000064916 1 2 2 80 1 109420530 109421123 TTGGAATTGCTGGAAAGTG 58 109421166 109421185 AACATCATCTTCATCCAGTG 57 NA Mus musculus 50 2010012O05Rik ENSMUSG00000062376 ENSMUST00000074912 3 1 1 80 19 46774262 46775273 TTCAGTACCAGCAAGAAGC 59 46776033 46776054 ACTTCAGTAAGTGACTCAACTG 59 NA Mus musculus 50 Olfr251 ENSMUSG00000062388 ENSMUST00000072731 3 1 1 60 9 38186214 38186233 CCACATCATAACTGTTAGCC 58 38186256 38186274 TGTTGGCTTGATATAGGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp706 ENSMUSG00000062397 ENSMUST00000078976 2 1 1 74 15 36931691 36933448 TCTGTAGGACACAAATGCC 59 36931635 36931653 GAAGTGGAGTCTTAGGGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Lilrb4 ENSMUSG00000062593 ENSMUST00000105482,ENSMUST00000105481,ENSMUST00000078778,ENSMUST00000105479 2 4 7 113 10 51211421 51211439 CATTCCAAGCATGACAACC 59 51211515 51211676 TCATATGCTCCTGTCATCAC 59 NA Mus musculus 50 Sox7 ENSMUSG00000063060 ENSMUST00000079652 1 1 1 81 14 64562764 64562782 GATGAGAGGAAACGTCTGG 59 64562827 64566606 CCTTCCATGACTTTCCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Psg20 ENSMUSG00000063305 ENSMUST00000108482 2 1 3 127 7 19268112 19269782 ATTTCTTCAGGTGTACTCCG 59 19268004 19268022 GAAGATTGTGGACAAGGAG 57 NA DesignNoJunction Mus musculus 50 Wscd2 ENSMUSG00000063430 ENSMUST00000100875 2 1 1 60 5 114001246 114001264 TAGGGACATTGGACTTGTC 58 114001288 114001306 TTGCCAATTAAGGAGTAGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Defcr5 ENSMUSG00000065956 ENSMUST00000084040 1 1 1 87 8 22675972 22675990 TAATACTGAGGAGCAGCCA 59 22676038 22676620 CAATTCTTCATGAAGAGCAGAC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Cyp4a12b ENSMUSG00000066071 ENSMUST00000084343 2 1 1 90 4 115000365 115000383 GATCTACCCTCCTGTACCA 59 115000437 115001328 AACATGGATACCTTTGGGT 58 NA Mus musculus 50 OTTMUSG00000001246 ENSMUSG00000066137 ENSMUST00000107336,ENSMUST00000084480 1 2 2 118 4 73062874 73062892 CCACTCTTAGTAGGGAGAG 57 73062471 73062792 ATTATACAGAGCACCTGGA 57 NA Mus musculus 50 Unc93a ENSMUSG00000067049 ENSMUST00000084966 3 1 1 291 17 13313669 13313687 ACCAACAGTACTCATCACC 58 13309168 13310492 AGGTCACATAAGACTTTGTG 57 NA DesignRelaxed Mus musculus 50 EG433882 ENSMUSG00000067285 ENSMUST00000087332 2 1 1 114 5 42596130 42596148 CTAGTCTCTGCGGAATCTG 59 42605840 42605859 ATACCATCAGGTGAAAGCAG 59 NA DesignNoJunction Mus musculus 50 Rpl35a ENSMUSG00000067558 ENSMUST00000087889 1 1 1 172 5 33418849 33418867 AACAATACGGTGACTCCTG 59 33419003 33419021 GTTTAAATCCGGGATGGGT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Lce1e ENSMUSG00000068889 ENSMUST00000090867 2 1 1 86 3 92511454 92511473 TTCTCCATTGTTTGATGTCC 58 92511387 92511407 ACATAGAACATTTCCCAGGAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Usp9y ENSMUSG00000069044 ENSMUST00000091188 3 1 1 80 Y 661352 661372 CCAACTGTGCTTAGTAAAGTC 58 655632 661311 ACATTCATACCTATGTGGGC 59 NA Mus musculus 50 V1rh11 ENSMUSG00000069289 ENSMUST00000091729 3 1 1 77 13 22616071 22616091 CCATATACCTCATTCTGATCC 57 22616129 22616148 CTATTGTCTTAGGCAGTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Prdm6 ENSMUSG00000069378 ENSMUST00000091900,ENSMUST00000115399,ENSMUST00000115398 3 3 3 124 18 53711980 53711998 GCTTTAAGACTTTCACGCA 58 53727852 53727870 GTGGTTCCTCAGTTCTGAC 59 NA DesignNoJunction Mus musculus 50 Fcho1 ENSMUSG00000070000 ENSMUST00000093444,ENSMUST00000098632 1 2 2 97 8 74240813 74241048 ACAAGAAGTGTAAGGAGGA 57 74240734 74240752 CAAGTAATTCTCGCGAGAC 58 NA Mus musculus 50 EG382156 ENSMUSG00000070324 ENSMUST00000080626 3 1 1 89 9 109289133 109289152 GAAGTTCTGGCAACTAAAGC 59 109287631 109289083 ATCTCCTACCAAGACAATTGG 59 NA Mus musculus 50 Olfr311 ENSMUSG00000070435 ENSMUST00000071625 3 1 1 60 11 58655217 58655237 CATTGGCTGCATTATCATGAG 59 58655257 58655277 CACAATGCCAATATAGGAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pnmal2 ENSMUSG00000070802 ENSMUST00000094807 1 1 1 60 7 17531422 17531440 TGAAGATGATTCCGACAGC 59 17531464 17531482 ATCCATCACTTCCTTTCCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 6330408A02Rik ENSMUSG00000070814 ENSMUST00000108532,ENSMUST00000086204 1 2 2 76 7 13862624 13862642 TAGTCTTCTCGGTGAAGAG 57 13862566 13862584 GATAAGCCTGTAGAGTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000017677 ENSMUSG00000071745 ENSMUST00000080324 3 1 1 215 X 70385005 70386858 TCATCCAGAAGGATAAGCG 58 70384808 70384826 ACATACTCTGCAGAGTCCA 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Klra14 ENSMUSG00000072721 ENSMUST00000049183 2 1 1 60 6 130105510 130105529 ATTACAGCTTACCCTTTGTG 57 130102545 130105488 TGGCATTGAAGGAATTTCAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Olfr441 ENSMUSG00000073109 ENSMUST00000095954 3 1 1 64 6 43066009 43066027 AACCATCTCCTTCATTCCA 58 43066055 43066073 ACTCTATGGAAGCAAAGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073290 ENSMUSG00000073290 ENSMUST00000086274 3 1 1 60 X 7486820 7486838 GTGACCACAGTATGTTCAG 57 7486860 7486880 ATCTTTCCCATACTTTCCCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cyp4f15 ENSMUSG00000073424 ENSMUST00000008801 2 1 1 80 17 32829620 32832226 ACATAATGCATGCCAAGTG 58 32832270 32832288 TCATGAGGCTGATGTTCTC 59 NA Mus musculus 50 MGI:3642075 ENSMUSG00000073442 ENSMUST00000097379 2 1 1 60 17 22953271 22953290 TGAAGAGAAGAAGCTGTAGC 59 22922886 22922905 CTGTGAAGAGACTCTGTGTC 59 NA DesignNoJunction, InUTR Mus musculus 50 5830472F04Rik ENSMUSG00000073623 ENSMUST00000097661 3 1 1 60 1 89693196 89693216 TGTACTCACTGTTATGGAGAC 58 89693237 89693256 TTAGGTTCTGTATTGCCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mup1 ENSMUSG00000073832 ENSMUST00000071005,ENSMUST00000107484,ENSMUST00000095049,ENSMUST00000107488,ENSMUST00000107489 2 5 5 60 4 61100126 61100144 GCAAATCCATGTCTTGGAG 58 61099316 61100105 CTCTTCATCTCTTACAGTATGG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 4933409K07Rik ENSMUSG00000073872 ENSMUST00000098117 2 1 1 60 4 42599097 42599116 ACTTCACAAAGTTGTTCCCT 59 42599137 42599157 AGATAAGGTTTGTGTCTCCTG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Olfr628 ENSMUSG00000073941 ENSMUST00000098193 2 1 1 233 7 110880452 110880470 TCAACAGCACCATCTTCAG 59 110880667 110880685 TTGGTAAGATGGAAGTGCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr582 ENSMUSG00000073961 ENSMUST00000098212 1 1 1 60 7 110190594 110190613 AGTCAATCGTGGATATGGAC 59 110190635 110190654 GACAGCTAAGTCAAAGACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr554 ENSMUSG00000073971 ENSMUST00000098221 2 1 1 60 7 109789600 109789621 CCAACTTCTATCTCCTCATTCC 59 109789641 109789660 TTGGTACGAACAGCATAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp94 ENSMUSG00000074282 ENSMUST00000108436,ENSMUST00000098693,ENSMUST00000093395 3 3 4 151 7 25094208 25096493 CAAGGTCAAGGAGATGGTG 59 25088878 25094093 CAGGATTCTTGTCTCCCAC 59 NA Mus musculus 50 1700104A03Rik ENSMUSG00000074343 ENSMUST00000098759 1 1 1 108 9 54149282 54149300 CTTACTCCTACTGCCTCTG 58 54117040 54127821 ATATCTTCCTCACGGTGAG 58 NA InUTR Mus musculus 50 ENSMUSG00000074351 ENSMUSG00000074351 ENSMUST00000098770 3 1 1 98 8 50144043 50144061 TTCACACTCTTTCCAGCTG 59 50143513 50143981 AGCTTCAGAGCTTTACACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Defcr22 ENSMUSG00000074443 ENSMUST00000098897 1 1 1 60 8 22302078 22302098 AAGAGACTAATACTGAGGAGC 58 22302120 22302138 CCAAAGGAGACAGACACAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 EG435366 ENSMUSG00000074863 ENSMUST00000099446 2 1 1 94 13 62807494 62807512 CTACAGGAACCTCAATGCT 58 62802661 62807068 TTCTTTCATGCCTTCTCCA 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Olfr1211 ENSMUSG00000075112 ENSMUST00000099808 3 1 1 60 2 88770174 88770193 TTGAAGGATGTATGATGCAG 57 88770133 88770151 ACAATCACTTCTACTGCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1182 ENSMUSG00000075124 ENSMUST00000102619 2 1 1 60 2 88286600 88286618 TGATGCTAGTCTGTTTGCC 59 88286558 88286577 ACATCACAGAAGTAGTGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1056 ENSMUSG00000075188 ENSMUST00000099893 1 1 1 60 2 86196423 86196441 CTCATCTATGTTGCCTCTG 57 86196381 86196399 CATCCAACTTGGTAAGGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1019 ENSMUSG00000075208 ENSMUST00000099914,ENSMUST00000102634 3 2 2 67 2 85681068 85681086 CTTGATCTACAGTTTGCGG 58 85681019 85681037 GTGGCTTCTTTCCAATCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Smok3b ENSMUSG00000075599 ENSMUST00000085886 1 1 1 60 5 138475022 138475041 GAGGATGATAGGAAATGCGA 59 138475064 138475082 AGATGTCTCTTTGGATGGG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRBV5 ENSMUSG00000076465 ENSMUST00000103266 3 1 1 62 6 41012389 41012512 TATGTCTTGTGGAAACAGCA 59 41012534 41012555 GGATTAGATATCTTGGTGACTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV14-111 ENSMUSG00000076519 ENSMUST00000103320 2 1 1 173 6 68206447 68206579 TTCCAGGTATCAAATGTGAC 57 68206715 68206733 TGTTTGCACGATAGATCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV9D-2 ENSMUSG00000076806 ENSMUST00000103617 1 1 1 76 14 53822826 53822938 GATACACTTTGTCCTGAGAG 57 53822977 53822995 CTCCTTCAGAGACAGTGAC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A2A5X5_MOUSE ENSMUSG00000078253 ENSMUST00000105050 1 1 1 60 11 99846911 99846930 TCCTGCTACATAGTCAAACG 59 99846870 99846888 GAGATGGGCAGGAAATAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2A9U8_MOUSE ENSMUSG00000078520 ENSMUST00000024200 1 1 1 100 4 136961823 136961841 TTCAGTATGAGATGGGTGG 58 136961621 136961759 GAGATAAGGCATGATGCAG 58 NA Mus musculus 50 CA087_MOUSE ENSMUSG00000078639 ENSMUST00000107071 1 1 1 80 4 96429469 96429488 CCCAGAAGAAAGTCTGTAGG 59 96428801 96429427 CCTTTGGACAATTTCCTCTG 58 NA Mus musculus 50 NP_001074723.1 ENSMUSG00000078907 ENSMUST00000109100 3 1 1 94 15 99105085 99109132 CATGTTCCCTAAGCTCCAG 59 99105009 99105028 AGACTGAAGATGACTTGCTC 59 NA Mus musculus 50 D030018L15Rik ENSMUSG00000078925 ENSMUST00000100271 2 1 1 146 15 95906554 95906572 ATGCAGTGAACAGACTTCC 59 95883417 95883436 TATTTGGGTATGGAGCACTG 59 NA DesignNoJunction Mus musculus 50 LOC636441 ENSMUSG00000078985 ENSMUST00000109705 1 1 1 60 12 117100253 117100274 ATATAAACTGGGTGAAGCAGAG 59 117100214 117100232 GGACCAATCTTTCCAATCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001092794.1 ENSMUSG00000079261 ENSMUST00000111826 2 1 1 159 14 46999281 46999300 TTGTAGCTTTCCTAACCGTG 59 47000059 47002767 TTGAACCAAATCCAACGGA 59 NA Mus musculus 50 Hoxa3 ENSMUSG00000079560 ENSMUST00000114434 3 1 2 81 6 52133786 52150850 TCCCTCCATGTTAAGAGTG 58 52133723 52133741 ATCTGAACCAGGAATGGTC 58 NA InUTR Mus musculus 50 Tcte3 ENSMUSG00000079710 ENSMUST00000097400 1 1 2 80 17 15104661 15107367 TCCAGCAGATATTAAAGGACAG 59 15104602 15104621 CATCTGCCAATTCAAGTGAC 59 NA Nonspecific Mus musculus 50 Ubfd1 ENSMUSG00000079869 ENSMUST00000115985 3 1 1 60 7 129225259 129225277 GCTTCTTGCTACCATTCAG 58 129225300 129225319 AGTTTAAAGACAGAGGGACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnb2 ENSMUSG00000080302 ENSMUST00000116647 3 1 1 72 1 15700904 15700962 ACAGTAAGCAGAGATAAGGG 58 15700997 15701015 TCACGGTTATGTCAATTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Fert2 ENSMUSG00000000127 ENSMUST00000000129,ENSMUST00000112833 1 2 4 89 17 64290821 64322424 ACATCCATGGAAAGAAAGGA 58 64322476 64322494 GAGTACCGACTTTGGAGAC 59 NA Mus musculus 50 AA881470 ENSMUSG00000000148 ENSMUST00000110807,ENSMUST00000041588,ENSMUST00000110806,ENSMUST00000100505 1 4 5 243 5 141186232 141187463 TTTGAGTACCTTCAGCAGG 59 141188521 141188539 TATGTACTAGGAGCTGGCT 59 NA DesignRelaxed Mus musculus 50 Cdh4 ENSMUSG00000000305 ENSMUST00000000314,ENSMUST00000108911 3 2 2 92 2 179515172 179532168 ACTCTGAACACAAGAAAGGG 59 179532223 179532241 CAGAGCTCTGATGTTGAGG 59 NA Mus musculus 50 Adora3 ENSMUSG00000000562 ENSMUST00000000574 1 1 1 60 3 105710727 105710746 GAGACCTACTTTCTGATCCT 57 105710769 105710787 AGTCCAAAGAATCTGAGGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Usp32 ENSMUSG00000000804 ENSMUST00000000821,ENSMUST00000108075 2 2 2 142 11 84917512 84953214 AGTTACAGATGTTGAGCTG 57 84897384 84917406 AACAGTAAATCACCTCAGC 57 NA Mus musculus 50 Pax9 ENSMUSG00000001497 ENSMUST00000110681,ENSMUST00000001538,ENSMUST00000116430 3 3 3 138 12 57801093 57801112 GAATGGATTGGAGAAGGGAG 59 57810711 57810729 CATGTAGGGTGACACTTGG 59 NA DesignNoJunction Mus musculus 50 Use1 ENSMUSG00000002395 ENSMUST00000110054,ENSMUST00000019169 1 2 3 80 8 73891952 73891970 TACATTTGCAGTCTAGGGC 59 73892452 73892757 CCTCACATTCTCCAGATGG 59 NA Mus musculus 50 Map2k7 ENSMUSG00000002948 ENSMUST00000062686,ENSMUST00000110999,ENSMUST00000110998,ENSMUST00000052385,ENSMUST00000003027,ENSMUST00000110995,ENSMUST00000110994,ENSMUST00000110996 1 8 8 80 8 4244004 4244023 GGATGTAGTACTCAAGAGCC 59 4244065 4244242 ATAAAGACGTCTGTGTTGGT 59 NA Mus musculus 50 Crbn ENSMUSG00000005362 ENSMUST00000113239,ENSMUST00000049675,ENSMUST00000013882 1 3 3 85 6 106740980 106744194 CACAGTCAGATGGAATCCA 58 106740913 106740931 TTCTAACTGCACTGCAGAC 59 NA Mus musculus 50 Uqcc ENSMUSG00000005882 ENSMUST00000109632,ENSMUST00000109636,ENSMUST00000088667,ENSMUST00000006036 2 4 6 101 2 155736187 155737484 CAAGTAAGCTTCTTACTACCCA 59 155736107 155736125 TCAAAGGTCCAGTGAATCC 59 NA Mus musculus 50 Cdkal1 ENSMUSG00000006191 ENSMUST00000006353 1 1 4 91 13 29449447 29535889 ATACGATCACAAGATTGGC 57 29449374 29449393 CATAGAATCGGTTATGAGCA 57 NA Mus musculus 50 Arid1a ENSMUSG00000007880 ENSMUST00000008024 3 1 3 82 4 133242369 133242387 GATGTATTCTCCTAGCCGC 59 133242227 133242324 CATAGGAATCATGTCGTTGC 59 NA Mus musculus 50 Fgfrl1 ENSMUSG00000008090 ENSMUST00000013633,ENSMUST00000112560 3 2 2 121 5 109134576 109134838 CTCACTGTATTACCAGACCC 59 109134922 109134940 GTGCCTAGGATGAAGACAG 59 NA Mus musculus 50 Ap1b1 ENSMUSG00000009090 ENSMUST00000063477,ENSMUST00000101613 2 2 4 108 11 4933258 4933701 CTGAAGGGATTGGAGATAGC 59 4933772 4933790 AAGAGGTCACTTAAGCCAC 59 NA Mus musculus 50 2610028H24Rik ENSMUSG00000009114 ENSMUST00000092406,ENSMUST00000105415 3 2 2 60 10 75917555 75920256 ATTAAGGAAGACATGGTGGAG 59 75920278 75920296 TGAGAATCTGGTGCATCTG 59 NA DesignRelaxed Mus musculus 50 Aldh3a2 ENSMUSG00000010025 ENSMUST00000066277 2 1 5 133 11 61038182 61062375 GTGATTGTCAAGCATCCTG 58 61038067 61038085 TTAAGTTGGCAGGAGACTC 58 NA Mus musculus 50 Aldh3a2 ENSMUSG00000010025 ENSMUST00000071413 2 1 5 85 11 61062416 61062434 AGTTCAACAAAGGAAGGCT 59 61061529 61062369 CAGAGCTTGGTATTTCTTGAC 58 NA Mus musculus 50 Spnb4 ENSMUSG00000011751 ENSMUST00000011895,ENSMUST00000108363,ENSMUST00000108364,ENSMUST00000108362 2 4 4 102 7 28142466 28144776 CAGGCTAAAGATGAGGAGG 59 28142382 28142400 TGGTAGGTAGTGTCTGACC 59 NA Mus musculus 50 Card14 ENSMUSG00000013483 ENSMUST00000106250,ENSMUST00000053245 3 2 2 80 11 119199125 119199562 CACTGAAGGTTATAAGAACCTC 58 119199603 119199621 TTGACACGGATGTAGAAGG 58 NA Mus musculus 50 Slamf6 ENSMUSG00000015314 ENSMUST00000015458 2 1 2 116 1 173869571 173869589 GTGTATGCACAAGTCACTC 58 173871823 173872723 TTAAGAGTATTCGGCCTCTC 58 NA Mus musculus 50 Zdhhc12 ENSMUSG00000015335 ENSMUST00000081838,ENSMUST00000102865 2 2 2 174 2 29947935 29947953 GCTATGTGACTACTCAGCC 59 29947286 29947304 GGACAGTGGTGATCATAGC 59 NA DesignNoJunction Mus musculus 50 Arnt ENSMUSG00000015522 ENSMUST00000102749,ENSMUST00000015666,ENSMUST00000090804 2 3 4 95 3 95297697 95297715 CAGTGCTATGTCTCTTCCG 59 95297774 95298378 GTCTCAGGAGGAAAGTTGG 59 NA Mus musculus 50 Gata5 ENSMUSG00000015627 ENSMUST00000015771,ENSMUST00000108890 1 2 2 63 2 180063012 180063030 CTACATGAAGCTCCATGGG 59 180062508 180062527 TCTTGTCTGGATACTCTCCT 59 NA DesignNoJunction Mus musculus 50 Gdap1l1 ENSMUSG00000017943 ENSMUST00000018087,ENSMUST00000109421 2 2 3 94 2 163273400 163276311 AGATCCGCAGACATTTAGC 59 163276367 163276387 TTGTTTAGAAAGGTAGGGCTC 59 NA Mus musculus 50 Mapt ENSMUSG00000018411 ENSMUST00000018555,ENSMUST00000106989,ENSMUST00000106988 3 3 10 83 11 104160561 104163683 CAACTTAAAGCTCGTGTGG 59 104166531 104166549 TTTAGCACAGGAAGGTGTG 59 NA Mus musculus 50 Myo1b ENSMUSG00000018417 ENSMUST00000018561,ENSMUST00000046390,ENSMUST00000114537,ENSMUST00000114541 2 4 4 80 1 51831201 51831220 TAGAGATTCCTGTGGAAGAG 57 51830211 51831161 CTTCTAGTTGGAATAATGTCCG 58 NA Mus musculus 50 Lhx1 ENSMUSG00000018698 ENSMUST00000018842,ENSMUST00000108082 2 2 3 148 11 84333901 84333920 GAAGGATGAAACAGCTAAGC 58 84333417 84333790 CTCACTCTGGTAATCTCCG 58 NA Mus musculus 50 Lhx9 ENSMUSG00000019230 ENSMUST00000093486,ENSMUST00000019374,ENSMUST00000112030,ENSMUST00000112026,ENSMUST00000046870 1 5 5 99 1 140729471 140734928 ACAACTCAGGTTGTAATGAG 57 140729391 140729409 TTGAAAGAAGTTCGCATCC 58 NA Mus musculus 50 Trip10 ENSMUSG00000019487 ENSMUST00000077277,ENSMUST00000019631 1 2 2 80 17 57394576 57394702 GATGCTAAGAACGACTCAC 57 57394745 57394764 GTCTTCAAATTCCAAGTCCC 58 NA Mus musculus 50 Prl8a1 ENSMUSG00000019756 ENSMUST00000006664,ENSMUST00000095926 2 2 2 84 13 27670519 27671513 CAAGAGTTTCTCCACAATGAG 58 27668834 27668852 TGAGAACAAGCTGATCCTG 59 NA Mus musculus 50 1700021K02Rik ENSMUSG00000020096 ENSMUST00000092494 2 1 6 124 10 60642162 60642180 ATTCTTATCCCGCTGTCTG 59 60643010 60643030 GGTAGGTGTTGTTTCCTCC 59 NA Mus musculus 50 Hcn2 ENSMUSG00000020331 ENSMUST00000099513,ENSMUST00000020581 3 2 2 84 10 79191843 79193598 AATACCAGGAGAAGTACAAGC 59 79193644 79193662 TAATCGTGGATCTTCTGGC 59 NA Mus musculus 50 Acsl6 ENSMUSG00000020333 ENSMUST00000108902,ENSMUST00000108904,ENSMUST00000101211,ENSMUST00000101213,ENSMUST00000108899 3 5 12 185 11 54143454 54143473 TTTCACAAGTGGTACAACAG 58 54150646 54151927 CAGTAGACAACAGACTGCA 59 NA Mus musculus 50 Ube2b ENSMUSG00000020390 ENSMUST00000020657,ENSMUST00000109086 2 2 2 80 11 51802194 51804906 TCATCCAAATGTGTATGCTG 58 51802133 51802153 GAAGAGACATCATATGTGGGA 58 NA Mus musculus 50 Pttg1 ENSMUSG00000020415 ENSMUST00000101340,ENSMUST00000020687 3 2 3 86 11 43233906 43234622 ATCATGGGAATCTGATCCG 58 43233838 43233856 TCTGCATCGTAACAAACAG 58 NA Mus musculus 50 Nup85 ENSMUSG00000020739 ENSMUST00000106510 1 1 3 83 11 115439369 115439811 CATTCTCAGCATCATGCTG 58 115439856 115439876 GTCACTAAGAAATGGTACCAG 58 NA Mus musculus 50 P2rx1 ENSMUSG00000020787 ENSMUST00000021141,ENSMUST00000092938 2 2 2 85 11 72826073 72826418 TCAACTTCAGATTTGCCAG 57 72826467 72826485 GATATCAAAGCGAATCCCA 57 NA Mus musculus 50 Mta1 ENSMUSG00000021144 ENSMUST00000109727,ENSMUST00000109726,ENSMUST00000009099,ENSMUST00000069690 2 4 5 129 12 114371431 114371449 AAGAGTTCATCCAGTGTGC 59 114371541 114371763 TCTTCATGTTGCCATCTACC 59 NA Mus musculus 50 Spata9 ENSMUSG00000021590 ENSMUST00000022081 1 1 2 65 13 76130528 76130546 TATGCTTCTTATGCAGCAC 57 76135950 76135968 CTTTATCTTTGCCAGCACC 59 NA DesignNoJunction Mus musculus 50 Camk2g ENSMUSG00000021820 ENSMUST00000071816,ENSMUST00000080440,ENSMUST00000100837 1 3 4 86 14 21583480 21584090 CCTACGATTTCCCATCACC 59 21583412 21583430 TTGCAGGGTTTATGGTCAG 59 NA Mus musculus 50 Samd4 ENSMUSG00000021838 ENSMUST00000022386,ENSMUST00000100672,ENSMUST00000111811,ENSMUST00000111809 2 4 5 86 14 47683995 47686071 GGAGGCTCAGAATGTTACC 59 47686121 47686139 GACTTCAGGAGGTTCTGTC 59 NA Mus musculus 50 Mtss1 ENSMUSG00000022353 ENSMUST00000036782,ENSMUST00000080371 1 2 3 240 15 58802613 58804038 TTCTCCAGTGCTTTGATCG 59 58788092 58788110 TATCGTTGACATCCTGGAG 58 NA DesignRelaxed Mus musculus 50 Bbx ENSMUSG00000022641 ENSMUST00000089404,ENSMUST00000089399,ENSMUST00000114489,ENSMUST00000023317,ENSMUST00000114488,ENSMUST00000114477 3 6 7 81 16 50274711 50274730 AGATACTAGCTGATTGGTGG 58 50266472 50274668 GCATCTTTATACTCCTTGGC 58 NA Mus musculus 50 Zbtb20 ENSMUSG00000022708 ENSMUST00000114694,ENSMUST00000079441,ENSMUST00000114695 2 3 5 120 16 43577299 43577684 CTAGAACGGAAGAAACCCA 58 43577767 43577786 AAACAGCTTCAAAGTTCAGG 58 NA Mus musculus 50 Dlg1 ENSMUSG00000022770 ENSMUST00000115205,ENSMUST00000115197,ENSMUST00000115201,ENSMUST00000064477,ENSMUST00000100001 1 5 8 80 16 31743285 31743303 TCAGAGAAGAACCTGTCAG 58 31743347 31771851 TTCTGTGGGCTTTATTGGT 59 NA Mus musculus 50 Tnk2 ENSMUSG00000022791 ENSMUST00000115125,ENSMUST00000115124,ENSMUST00000115123,ENSMUST00000023480,ENSMUST00000115122,ENSMUST00000115121 2 6 6 64 16 32670954 32670972 GAGATGTTCACCTATGGCC 59 32671000 32671394 ATCTTATGCAGGATCTGGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Usp25 ENSMUSG00000022867 ENSMUST00000023580 1 1 2 80 16 77037666 77037684 AGACAGGCTATTACCAGAC 58 77037727 77048695 CAATTACATTTGCATCTGCC 58 NA Mus musculus 50 Mx2 ENSMUSG00000023341 ENSMUST00000088798 3 1 2 142 16 97777612 97777630 TATCGTGGACGAGAATTGC 59 97777736 97780083 ACATCCAACAGATCTGAGC 59 NA Mus musculus 50 Epb4.1l3 ENSMUSG00000024044 ENSMUST00000112679,ENSMUST00000112678 2 2 6 123 17 69611627 69611645 GACAGAAGGAAGAAGGCTG 59 69619996 69624053 TATCTAGATCCTCCGTGGC 59 NA Mus musculus 50 Svil ENSMUSG00000024236 ENSMUST00000115871,ENSMUST00000025079,ENSMUST00000055015 2 3 3 159 18 5046764 5046782 AAGAAAGAATTGCTAGGCG 58 5046905 5048892 TTGGATCGCCCAATATGAG 59 NA DesignRelaxed Mus musculus 50 Trim26 ENSMUSG00000024457 ENSMUST00000053434,ENSMUST00000087160 1 2 2 84 17 36993674 36993695 GATAAACTTCTTTCTCTGCAGC 59 36993954 36994353 TGACGCTTACTGTCTTATACTC 59 NA Mus musculus 50 Lao1 ENSMUSG00000024903 ENSMUST00000025838 3 1 2 95 4 118639744 118639764 CCTTTATGACTCTTACTCCAC 57 118640010 118640034 CCAGCATTCTCATTATATCCC 58 NA Mus musculus 50 Cyp2e1 ENSMUSG00000025479 ENSMUST00000026552,ENSMUST00000106055 1 2 3 93 7 147959025 147959043 AGATTCATCAACCTCGTCC 59 147959100 147959541 TTACAACTGTACCCTTGGG 58 NA Mus musculus 50 Pdgfa ENSMUSG00000025856 ENSMUST00000110897,ENSMUST00000110896,ENSMUST00000076095 1 3 4 82 5 139455152 139455170 GTTAGAGGAACACCTGGAG 58 139453170 139455106 CTCACCTCACATCTGTCTC 59 NA Mus musculus 50 Pecr ENSMUSG00000026189 ENSMUST00000027381,ENSMUST00000097698 2 2 2 93 1 72316911 72316930 GAGAAGGTGTTTACAACCTC 58 72314078 72316855 GAGTAAATGGTCCCAGGAG 59 NA Mus musculus 50 Dnajb10 ENSMUSG00000026203 ENSMUST00000055223 2 1 3 173 1 75233473 75233491 CGAGATTCTAGACGTACCG 59 75234134 75236095 GAAGGACCACTTCTGTCAG 59 NA Mus musculus 50 3110009E18Rik ENSMUSG00000026388 ENSMUST00000027637,ENSMUST00000056038,ENSMUST00000112644 3 3 3 83 1 122047254 122047275 CAAACCTGTAGTGTATCATGGA 59 122047319 122057195 CTCAAAGGGACATCTTGCT 59 NA Mus musculus 50 Pou2f1 ENSMUSG00000026565 ENSMUST00000111426 2 1 7 98 1 167847118 167847136 CTGGACTTTCAGAAACAGC 58 167843466 167847057 TTCACTGGATTTAGACTGGT 58 NA Mus musculus 50 Sell ENSMUSG00000026581 ENSMUST00000027871 1 1 2 89 1 165996440 165996751 GTCAGTATGTGGTCCAGTG 59 165996804 165996822 ACTGGAAGCTGAAGTTTCC 59 NA Mus musculus 50 Mllt10 ENSMUSG00000026743 ENSMUST00000028076,ENSMUST00000114680,ENSMUST00000114671,ENSMUST00000091418,ENSMUST00000114670,ENSMUST00000114669 2 6 6 80 2 18125311 18125329 TTGAACAGCTCTTGGAGAG 59 18125372 18127636 TTCCTAGAATGTCACCAGGA 59 NA Mus musculus 50 Gtf3c5 ENSMUSG00000026816 ENSMUST00000028157,ENSMUST00000113889 2 2 2 82 2 28426736 28427723 ATTACATGATAACAGGCCCG 59 28426673 28426692 ATAAATCTTGGCATCTGGGT 59 NA Mus musculus 50 Grin1 ENSMUSG00000026959 ENSMUST00000114312,ENSMUST00000114307,ENSMUST00000114318,ENSMUST00000114314,ENSMUST00000114317,ENSMUST00000114310,ENSMUST00000028335,ENSMUST00000114308 1 8 8 80 2 25151651 25152082 CCTGTCCATACTCAAGTCC 59 25151589 25151609 GAGTCACATTCTTGATACCGA 59 NA Mus musculus 50 Atf2 ENSMUSG00000027104 ENSMUST00000055833,ENSMUST00000112017,ENSMUST00000112016,ENSMUST00000100009 3 4 10 91 2 73689035 73691865 TGTCATTGTGGCTGATCAG 59 73688962 73688980 CAAATGGACTTGCCAACTC 59 NA Mus musculus 50 Rad51 ENSMUSG00000027323 ENSMUST00000028795 3 1 2 100 2 118957268 118957287 GATAATGTAGCATATGCGCG 59 118957350 118959824 ATAAGCAGTGCATACCTGG 59 NA Mus musculus 50 Zfp639 ENSMUSG00000027667 ENSMUST00000029203,ENSMUST00000116344 3 2 2 82 3 32414264 32415960 TCGCTATTCAGATTCTTCTGG 59 32416004 32416022 AGCAGACACTGTAACAGTG 59 NA Mus musculus 50 Dclre1b ENSMUSG00000027845 ENSMUST00000029435,ENSMUST00000106833,ENSMUST00000106834,ENSMUST00000106832 1 4 5 74 3 103612021 103612042 CTGTCATGTTTCTCTTTGAAGG 59 103611473 103611491 GCATGGATGGTGTATATCG 57 NA DesignNoJunction Mus musculus 50 Hormad1 ENSMUSG00000028109 ENSMUST00000090797,ENSMUST00000107154,ENSMUST00000029754 2 3 3 147 3 95374866 95379466 GAGATCCTCAGACAATTTCAG 58 95380248 95380267 CGAATGAGGAGAATACTTGC 58 NA Mus musculus 50 Jmjd2c ENSMUSG00000028397 ENSMUST00000077851,ENSMUST00000030102 1 2 3 80 4 73917205 73917223 CACGCAATACAACATCCAG 59 73917266 73926812 GGAGTACAGTATTTGCTGCT 59 NA Mus musculus 50 Cntfr ENSMUSG00000028444 ENSMUST00000102962,ENSMUST00000102961 2 2 4 82 4 41610285 41610303 GGTCTCCATAAGTGTCAGC 59 41609156 41610239 GATCAGGCTTCACAATGGT 59 NA Mus musculus 50 Sgip1 ENSMUSG00000028524 ENSMUST00000102775,ENSMUST00000106882,ENSMUST00000080728,ENSMUST00000097946 1 4 9 114 4 102591451 102593635 GTTGCAACAGGAAATGACC 59 102593713 102593731 TAACAGCAACAGACTTGGG 59 NA Nonspecific Mus musculus 50 Pum1 ENSMUSG00000028580 ENSMUST00000105991 3 1 6 104 4 130225195 130225213 CATTCATGCAGAACACCAG 59 130257023 130297394 TTGGGTCTTTGGAATAGCTC 59 NA Mus musculus 50 Kif2c ENSMUSG00000028678 ENSMUST00000065896 1 1 2 80 4 116853221 116853239 AACGTGGAGAAATCCTGTG 59 116850834 116853179 CACATCGTCAATGTCAATCTC 59 NA Mus musculus 50 Bai2 ENSMUSG00000028782 ENSMUST00000106017,ENSMUST00000106015,ENSMUST00000106012,ENSMUST00000030571,ENSMUST00000097868,ENSMUST00000106018 3 6 6 81 4 129698485 129698812 ACTTGGACTTTGAGAAGGTG 59 129698856 129698874 AAAGTGTGGAACTTCTGGT 58 NA InUTR Mus musculus 50 Bai2 ENSMUSG00000028782 ENSMUST00000106017,ENSMUST00000106015,ENSMUST00000106012,ENSMUST00000030571,ENSMUST00000097868,ENSMUST00000106018 2 6 6 81 4 129698485 129698811 ACTTGGACTTTGAGAAGGT 58 129698856 129698874 AAAGTGTGGAACTTCTGGT 58 NA Mus musculus 50 Epb4.1 ENSMUSG00000028906 ENSMUST00000105975,ENSMUST00000105970,ENSMUST00000105982 3 3 14 174 4 131559699 131561974 GGATTATTAAACCAGCTCAGGA 59 131559546 131559564 CAGTGCATGTTTCTGTGTC 59 NA Mus musculus 50 Masp2 ENSMUSG00000028979 ENSMUST00000105702,ENSMUST00000103219,ENSMUST00000052060,ENSMUST00000105701 1 4 4 90 4 147977203 147977222 CTAAAGGTCACCTTCCACTC 59 147977275 147977810 TGCATTCATCCACATCCTC 59 NA Mus musculus 50 Trp73 ENSMUSG00000029026 ENSMUST00000105644,ENSMUST00000030892,ENSMUST00000105641 1 3 7 96 4 153478527 153478938 TGGAGTTCTCTAGAGCCAG 59 153478449 153478467 CATCCATGTTGGACTCCTC 59 NA Mus musculus 50 Add1 ENSMUSG00000029106 ENSMUST00000114340 3 1 5 108 5 34971147 34973122 GTCAAGCTTGAAGAAGACCT 59 34973193 34973211 CTTCTGAAGGCTCATCAGG 59 NA Mus musculus 50 Aff1 ENSMUSG00000029313 ENSMUST00000081312 3 1 4 88 5 104270112 104270132 AACTGGATAAGTCGCACTG 59 104271257 104271275 CTTGAGTTCTCTGAGGAGG 58 NA Mus musculus 50 Prkab1 ENSMUSG00000029513 ENSMUST00000031486,ENSMUST00000111999 1 2 2 86 5 116464727 116464932 CTCCATCAAGGATGGAGTG 59 116464659 116464678 CATATCGGCTTGTAGAGGAG 59 NA Mus musculus 50 Tpk1 ENSMUSG00000029735 ENSMUST00000067888,ENSMUST00000114644 3 2 3 101 6 43373694 43373712 TAGACACTGGAATGGAAGG 58 43296891 43373629 CATCATTTGTGAGGTTCCA 57 NA Mus musculus 50 Dync1i1 ENSMUSG00000029757 ENSMUST00000115556,ENSMUST00000115559,ENSMUST00000031771 3 3 5 80 6 5734485 5750779 GACTCAGAACTTGGGAGAC 59 5750823 5750841 TACTACTTCCCTAGGCAGG 59 NA Nonspecific Mus musculus 50 Anxa4 ENSMUSG00000029994 ENSMUST00000089525 2 1 3 116 6 86702172 86702190 ACACATCCTTCATGTTCCA 58 86700892 86701059 AGGAGTGTTGAAAGACCTG 59 NA Mus musculus 50 Copg ENSMUSG00000030058 ENSMUST00000049966,ENSMUST00000113607 3 2 2 76 6 87839697 87839715 ACATCCTCACCAAGATCCT 59 87839973 87839991 AAAGAAAGCCTCAGTTGCT 59 NA DesignNoJunction Mus musculus 50 Csda ENSMUSG00000030189 ENSMUST00000111988,ENSMUST00000032309,ENSMUST00000087865,ENSMUST00000081659 3 4 4 93 6 131334581 131338050 AGAAGAAAGTTCTCGCCAC 59 131333538 131334524 TCTTTGGTGTCATTTCGGT 59 NA DesignRelaxed Mus musculus 50 Dmpk ENSMUSG00000030409 ENSMUST00000032568,ENSMUST00000108475,ENSMUST00000108473,ENSMUST00000108472,ENSMUST00000108471,ENSMUST00000108474 3 6 6 84 7 19672975 19672994 GAGATGTTCTATGGGCAGAC 59 19673041 19673359 ACAAGTGTTCCCTGTAGTG 59 NA Mus musculus 50 Tmc5 ENSMUSG00000030650 ENSMUST00000098088,ENSMUST00000057320 3 2 2 80 7 125783514 125785732 TTTCACTGACTTACCGCAG 59 125785776 125785794 CCTTGAATCTCTTCTGCCA 59 NA Mus musculus 50 Eif3c ENSMUSG00000030738 ENSMUST00000032992,ENSMUST00000081514 2 2 2 80 7 133700016 133700236 AGGATCCTCAAAGTCTGAG 57 133699954 133699972 TACTTGCACAGTCTTTCCA 58 NA Mus musculus 50 Cask ENSMUSG00000031012 ENSMUST00000033321 1 1 9 105 X 13126474 13129506 CTGTTTCGATCTATGTAAGAGC 58 13126390 13126408 TGGATGATGTCACCAACTC 59 NA Mus musculus 50 Cask ENSMUSG00000031012 ENSMUST00000116623,ENSMUST00000115438,ENSMUST00000115432 3 3 9 150 X 13128102 13129510 AATTCTGTTTCGGACTTGC 58 13126385 13126404 TAATCTGGATGATGTCACCA 58 NA Mus musculus 50 Col4a5 ENSMUSG00000031274 ENSMUST00000087358 1 1 4 122 X 138093076 138101386 TCCTCCAGATTACCAAGGT 59 138101472 138101490 TTCAAACCAGGTAAGCCTG 59 NA Mus musculus 50 Gpm6b ENSMUSG00000031342 ENSMUST00000112235,ENSMUST00000112233,ENSMUST00000112224,ENSMUST00000112223,ENSMUST00000112227,ENSMUST00000112226 3 6 12 81 X 162821867 162821886 TTCTACATGTCCTATCACCT 57 162821930 162823338 CCATCATGTAGATCAGCAG 57 NA Mus musculus 50 Abcd1 ENSMUSG00000031378 ENSMUST00000114461,ENSMUST00000002084 2 2 2 80 X 70966419 70974326 GCTATGCAGAGTCAGACTC 59 70974370 70974388 CTGTACGCTCACTAACCAG 59 NA Mus musculus 50 Arhgef7 ENSMUSG00000031511 ENSMUST00000033908,ENSMUST00000110909,ENSMUST00000110914,ENSMUST00000110911,ENSMUST00000110910 1 5 7 192 8 11728407 11758439 CATCGAGAAAGTCTACCCG 59 11781232 11782535 TAGTCCAATGTCTGCTGTC 58 NA Mus musculus 50 Barx2 ENSMUSG00000032033 ENSMUST00000051296 3 1 2 113 9 31654574 31654595 CCTAAGAAGAATTCCATTCCCA 59 31654392 31654500 TTCAGAGGAAGCTTGTCTC 58 NA Mus musculus 50 rp9 ENSMUSG00000032239 ENSMUST00000034763 3 1 2 91 9 22258223 22258242 AGTTAGAACAGTTCCGAGTC 59 22253289 22254254 CTGCTGGATCCTTACATCC 59 NA Mus musculus 50 Dclk3 ENSMUSG00000032500 ENSMUST00000111879,ENSMUST00000035081 1 2 2 95 9 111371740 111371758 TCACAGACTTGTGTAAGGC 59 111371817 111385137 CTTCATTTCGCTGAACCAG 59 NA Mus musculus 50 Ccdc85a ENSMUSG00000032878 ENSMUST00000042534,ENSMUST00000109502 3 2 4 111 11 28334149 28476400 GGCATGAATGAATCAACCT 58 28288924 28288942 CATCTCCAAGTTTCCTCCA 58 NA Mus musculus 50 2700078E11Rik ENSMUSG00000033417 ENSMUST00000111460 3 1 2 108 19 60605408 60618927 TTTACAGCCTAATGCAGGT 58 60604941 60604961 CAACCGTCACTATCTATACCC 59 NA Mus musculus 50 Rbm9 ENSMUSG00000033565 ENSMUST00000109780 1 1 5 88 15 76933359 76944042 GCTCCAAGGTGAATAATGC 58 76929903 76929921 TACTGGGCTTAACTTCCAG 58 NA Mus musculus 50 4732418C07Rik ENSMUSG00000034210 ENSMUST00000106522 2 1 4 100 4 115439103 115441223 TTTCTAGCATCAAAGGCCA 59 115441287 115441305 GAGTTCAGTTCCTAGCGTC 59 NA Mus musculus 50 Igsf9b ENSMUSG00000034275 ENSMUST00000115247,ENSMUST00000098919 2 2 3 81 9 27125081 27125402 CAAAGTATCAGGTGAGTGAC 57 27125446 27125464 TATGCTCGACACGTATAGG 58 NA Mus musculus 50 Tle2 ENSMUSG00000034771 ENSMUST00000043334 3 1 2 85 10 81039033 81039280 CATTATGTGATGGCTGCAC 59 81039328 81039347 TAGTACTGCAAAGGAGACAG 58 NA Mus musculus 50 Tle2 ENSMUSG00000034771 ENSMUST00000051853 1 1 2 91 10 81038629 81038647 TTCAAGCTCAGTACCACAG 59 81039032 81039351 CTCGTAGTACATCACATAATGC 58 NA Mus musculus 50 Plekhh3 ENSMUSG00000035172 ENSMUST00000043397 2 1 2 81 11 101026100 101026379 CACCAGGTTTGAGAATTTGAC 59 101026039 101026057 AAGACGAAGACACAGTCTC 58 NA Mus musculus 50 Myo1d ENSMUSG00000035441 ENSMUST00000070997 3 1 2 80 11 80397488 80400363 ATCCCACTGTACAACATCAG 59 80397427 80397448 TGTTCTGAAGTTAGTTCTTCCC 59 NA Mus musculus 50 6530402F18Rik ENSMUSG00000035513 ENSMUST00000048455,ENSMUST00000091153,ENSMUST00000102873 2 3 6 105 2 29052580 29052598 TGTAAACACAACACTCGAG 57 29051293 29052512 AGTTACATTCAATGCAGACG 58 NA Mus musculus 50 Ankrd11 ENSMUSG00000035569 ENSMUST00000039345 3 1 2 92 8 125426236 125426337 ACACAGAACTTTCAACTGG 57 125424013 125424031 TCCTTCTTGATCCTCTTCC 57 NA Mus musculus 50 Fbxw2 ENSMUSG00000035949 ENSMUST00000113080,ENSMUST00000028220,ENSMUST00000091020,ENSMUST00000113075 2 4 8 81 2 34678122 34678143 CTTCGTTAATTGGACATAGTGC 59 34668514 34678080 GACAAGTCATCTGACCCTG 59 NA Mus musculus 50 Dock4 ENSMUSG00000035954 ENSMUST00000037488,ENSMUST00000101460 3 2 2 120 12 41561214 41561233 CTTTGTTGTCTGACAAACAC 57 41561315 41563233 TGATTAAACAGCATCCTCTG 57 NA Mus musculus 50 Gm98 ENSMUSG00000036098 ENSMUST00000096230,ENSMUST00000088013 1 2 2 80 19 10294058 10294076 CTCCATTTCAGTGAGACCA 58 10293603 10294014 CACCAGCATGAAATACCTC 58 NA Mus musculus 50 Etl4 ENSMUSG00000036617 ENSMUST00000114610,ENSMUST00000114627,ENSMUST00000114624,ENSMUST00000114620,ENSMUST00000114619,ENSMUST00000045555,ENSMUST00000114614,ENSMUST00000114609,ENSMUST00000066509 1 9 12 80 2 20631222 20634994 TGATGTGAGGAATATCCAAGAC 59 20635034 20635053 TTCGTCATGTGGTTAAATGC 59 NA Mus musculus 50 Kcnk9 ENSMUSG00000036760 ENSMUST00000044624 1 1 1 60 15 72342999 72343017 GACCATGAATACCGATGAG 57 72342957 72342975 ATTTCCAGCAAGAATCTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Abcc12 ENSMUSG00000036872 ENSMUST00000109667,ENSMUST00000080115,ENSMUST00000074742,ENSMUST00000109665 3 4 5 122 8 89058865 89058886 GTCATTCTGTTAGAAGATGGAG 58 89058654 89058782 CTCTGGATCCTTGAATTGC 58 NA Mus musculus 50 Spry1 ENSMUSG00000037211 ENSMUST00000108109,ENSMUST00000038569,ENSMUST00000094301 2 3 4 145 3 37539728 37541492 GAGGATTTCAGATGCATGG 58 37541601 37541619 CATAGTCTAACCTCTGCCG 59 NA DesignNoJunction, InUTR Mus musculus 50 1700055N04Rik ENSMUSG00000037263 ENSMUST00000025794 3 1 1 141 19 3968501 3968519 CATGTACATGACCCTGTCC 59 3969844 3969863 ATTAAGCTTCTCCATCCCAG 59 NA DesignNoJunction Mus musculus 50 Stag1 ENSMUSG00000037286 ENSMUST00000041418,ENSMUST00000041595 3 2 2 103 9 100612868 100612886 ATGAAACTACTGCCCACTC 59 100612952 100638408 CTTATTTGTTGATGGAGGCC 58 NA Mus musculus 50 Atp8a1 ENSMUSG00000037685 ENSMUST00000037380 2 1 5 114 5 68167434 68170213 CAGTCTGTCCTCAAGTGAG 59 68166060 68166080 GTCTTTGATATCCGATGTTGC 59 NA Mus musculus 50 Ccdc50 ENSMUSG00000038127 ENSMUST00000039443,ENSMUST00000100026 3 2 3 90 16 27435727 27435746 TGAAATTGCCAGGAAATTGC 59 27436489 27436592 AGCAATTTCCTCATCCTGG 59 NA Mus musculus 50 AW146299 ENSMUSG00000038770 ENSMUST00000110672,ENSMUST00000116454,ENSMUST00000085681 1 3 5 114 5 145762085 145765810 AATATCGCTGGAGACTGTG 59 145758099 145758118 AGATGTTCCGAAGAAATGTG 58 NA Mus musculus 50 Sccpdh ENSMUSG00000038936 ENSMUST00000097455 2 1 2 83 1 181610733 181615866 ACTCACCAGTTCAGTATGC 59 181616707 181616725 CTCCAGGTGTAAAGACACC 59 NA Mus musculus 50 A230083H22Rik ENSMUSG00000039126 ENSMUST00000087689 1 1 3 80 19 17286188 17286786 TTAAGAGAAGTGTGAGACTGG 59 17290822 17290841 CTGGATCATTGTAAAGGCAG 58 NA Mus musculus 50 Cdc123 ENSMUSG00000039128 ENSMUST00000100445 1 1 3 82 2 5742326 5742344 ATCACCCATGACTTCACAC 59 5731054 5731850 ACTAGATTTGGCTCGTACTC 58 NA Mus musculus 50 Whrn ENSMUSG00000039137 ENSMUST00000084510,ENSMUST00000107391,ENSMUST00000095038 3 3 11 121 4 63092942 63092962 GTATTCCATGGTTTCCTACAG 58 63080518 63090131 CTAATGTATTCTCCATCAGGTC 57 NA Mus musculus 50 Mtmr7 ENSMUSG00000039431 ENSMUST00000048890 2 1 2 80 8 41639676 41639696 GTTACAGATTACCTCATGGCT 59 41637259 41639634 TTCCAGCCTTTCTTCTAGG 58 NA Mus musculus 50 Ccbl1 ENSMUSG00000039648 ENSMUST00000113665,ENSMUST00000113660 1 2 8 140 2 30043759 30043777 CTTGTTCACAGCCTTTCAG 58 30042817 30043581 TTAGAGAATACCAGCCTCAG 58 NA Mus musculus 50 Rapgef1 ENSMUSG00000039844 ENSMUST00000095087,ENSMUST00000091146,ENSMUST00000102872,ENSMUST00000048301 1 4 4 80 2 29592174 29592851 CATGTATCCCATACCTAGGTC 58 29592890 29592911 CTTTCCCGTCAATATAATCTGG 58 NA Mus musculus 50 Orc3l ENSMUSG00000040044 ENSMUST00000108142,ENSMUST00000048706 2 2 3 81 4 34554428 34554447 CTGAGGACAGTAAACTTCGA 59 34552917 34554384 TCCTCCTGTAATTGCTCTG 58 NA Mus musculus 50 Ranbp17 ENSMUSG00000040594 ENSMUST00000102815 1 1 2 80 11 33229537 33341813 GAACCTCAAAGGTGTATGC 58 33229475 33229493 TCGTCATGAATGTTTCCAG 57 NA Mus musculus 50 9030409G11Rik ENSMUSG00000040606 ENSMUST00000070792 1 1 2 84 4 141665248 141665266 GAAACACAGAACACAGACC 58 141664618 141665200 CTGCATACTCCTTCAGGTC 59 NA Mus musculus 50 Rcsd1 ENSMUSG00000040723 ENSMUST00000040357 3 1 2 83 1 167593752 167593770 CAACAAGAAGGAAACCACC 58 167589566 167593705 ATGGTGATTTCTCCTCACC 58 NA Mus musculus 50 Agbl2 ENSMUSG00000040812 ENSMUST00000111482 1 1 7 84 2 90629150 90629168 GGTACATGTTGAATGGCTC 58 90629216 90631626 AGAAGTGAGTACAGAAGCA 57 NA Mus musculus 50 Zmiz2 ENSMUSG00000041164 ENSMUST00000109787,ENSMUST00000012612,ENSMUST00000109786,ENSMUST00000109789,ENSMUST00000093347,ENSMUST00000102914,ENSMUST00000109785 1 7 7 87 11 6302868 6303135 ATTCAGAACTCAGACTACGAG 58 6303184 6303202 CCTTGATGTGTAGGTCAGG 59 NA Mus musculus 50 Pla2g5 ENSMUSG00000041193 ENSMUST00000102513,ENSMUST00000102512,ENSMUST00000030524,ENSMUST00000102511 1 4 4 82 4 138360473 138360492 AAGAACTATGGCTTCTACGG 59 138357362 138360428 ATCTGACAGCACCAATCAG 59 NA Mus musculus 50 Arhgap11a ENSMUSG00000041219 ENSMUST00000040215,ENSMUST00000102545,ENSMUST00000110947 3 3 5 132 2 113675061 113677030 GAGATTCAGATGGATGTTCTG 58 113674949 113674968 CTTTCATCAATATCTGGGCT 57 NA Mus musculus 50 Slc39a11 ENSMUSG00000041654 ENSMUST00000071539,ENSMUST00000042657 3 2 3 81 11 113325336 113325354 TGAAGAAGTCTGATCCCAG 58 113231200 113325291 TTCTCACGCTTGTCTATCC 59 NA Mus musculus 50 Tpp2 ENSMUSG00000041763 ENSMUST00000097767 2 1 2 133 1 44040430 44047366 AGAAAGCTGATGTGATCCC 59 44047461 44047481 GCGTAATGCTTCAGTAAACTC 59 NA Mus musculus 50 Specc1 ENSMUSG00000042331 ENSMUST00000049836,ENSMUST00000108709 2 2 3 80 11 61856511 61856530 CTGAAGAAGACCTCAACCTC 59 61856573 61931215 TGTTGGAATAGTCCCTGTG 58 NA Mus musculus 50 Dusp15 ENSMUSG00000042662 ENSMUST00000109811,ENSMUST00000069018 1 2 3 80 2 152771210 152771228 CTTCAAAGAATGCGTCCAC 59 152770044 152771167 GATATACCTGCAAAGCAGTG 58 NA Mus musculus 50 E330026B02Rik ENSMUSG00000043719 ENSMUST00000098441 1 1 2 80 9 105665137 105665157 GGATTTGAATACAGGACACAG 58 105663835 105665096 TGCAACATTGATTAGTTGCC 59 NA Mus musculus 50 Ccdc141 ENSMUSG00000044033 ENSMUST00000049544 3 1 4 83 2 76865704 76865722 GTTTATTACTCCCTCGGTG 57 76861606 76865658 TCTTCCAAACCATATAAGCG 57 NA Mus musculus 50 Bcl2l15 ENSMUSG00000044165 ENSMUST00000062945,ENSMUST00000106820 3 2 2 80 3 103637336 103637355 ATCAGTTCAATGGAGAGCTG 59 103637398 103639981 GTACAGTACTTCCTGCCTG 59 NA Nonspecific Mus musculus 50 Dok7 ENSMUSG00000044716 ENSMUST00000114270,ENSMUST00000114273,ENSMUST00000050709 3 3 4 96 5 35409260 35409279 AATGGATTCATCTTCGAAGG 57 35417990 35418008 CAAACAGGAAGCTCATCTG 58 NA DesignNoJunction Mus musculus 50 Cyb5d1 ENSMUSG00000044795 ENSMUST00000108660 3 1 2 204 11 69208301 69208319 TTGCATGAGATACCGTACC 59 69207288 69208134 TATTTCCATGTGTAGCTGCA 59 NA DesignRelaxed Mus musculus 50 1110034G24Rik ENSMUSG00000044991 ENSMUST00000061891,ENSMUST00000110132 3 2 2 83 2 132517859 132575960 CTGATCCAGATAGCAATTCTC 57 132576004 132576023 CTTTCGAAGAAGGATCAAGC 58 NA Mus musculus 50 Zfp691 ENSMUSG00000045268 ENSMUST00000052715,ENSMUST00000106355 1 2 2 62 4 118843343 118843361 ACAATACCTCCAACCTGAG 58 118843299 118843317 AACACTTGTAGGGCTTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trim39 ENSMUSG00000045409 ENSMUST00000042717,ENSMUST00000113706 1 2 4 99 17 36397863 36398451 CTTAAACAGCTAATTGCGGA 58 36397783 36397801 TTGTCTCCACAAACTTGAC 57 NA Mus musculus 50 St7l ENSMUSG00000045576 ENSMUST00000106769,ENSMUST00000059271 1 2 3 80 3 104677849 104685718 CTTCAGACACAGTTATGCAG 58 104685759 104685779 ACTCTAAAGCTTGATAGGCTG 59 NA Mus musculus 50 Rbm16 ENSMUSG00000046201 ENSMUST00000082356,ENSMUST00000076734 2 2 2 64 17 3145126 3145144 CAAATTACAAAGGCAGCCA 58 3148548 3148567 TTCTCAACACTTTGTACCAC 57 NA DesignNoJunction Mus musculus 50 1810044A24Rik ENSMUSG00000047921 ENSMUST00000063060 1 1 3 178 15 72843241 72843260 CTAGATCCCAAGGACTTCAG 58 72829762 72830410 ACCAATGTTTCCTGGTCAG 59 NA Mus musculus 50 Tas2r126 ENSMUSG00000048284 ENSMUST00000059534 3 1 1 60 6 42385042 42385061 TTAAGGAGTGGAACAGAAGG 58 42385083 42385102 ATGGTGACAACTTTCAGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4833426J09Rik ENSMUSG00000048371 ENSMUST00000059588,ENSMUST00000109435 3 2 2 60 8 107118150 107118169 GACATCTCGCTAGAAATCCA 59 107118192 107118210 GGAGGGATAAGTTTCTCGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gm766 ENSMUSG00000048473 ENSMUST00000087502 2 1 1 191 6 142746476 142750220 CAGTGCAAGATTATCTACATCG 59 142743872 142743891 TAATAAGAACATGGCCAGGT 58 NA Mus musculus 50 Fer1l3 ENSMUSG00000048612 ENSMUST00000041475,ENSMUST00000087265 1 2 3 80 19 38046712 38046731 AATGATGTAGTTGGGACCAC 59 38042929 38046669 CTCTCCTGTAGTTGCTTCC 59 NA Mus musculus 50 Rtbdn ENSMUSG00000048617 ENSMUST00000067472,ENSMUST00000109740 2 2 2 108 8 87476825 87476843 CTGGGACAACTTCAAGGAG 59 87476915 87478916 AGGTGGTGAACCAAATCTG 59 NA Mus musculus 50 Hmgb4 ENSMUSG00000048686 ENSMUST00000053830 3 1 1 61 4 127937855 127937874 ATGGAGATCCATCTCAAAGC 59 127937813 127937832 CTTTATCGAGCTCTGCTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trappc1 ENSMUSG00000049299 ENSMUST00000060956 3 1 4 86 11 69138451 69139064 ATATCTACAGTGCGAGCTG 58 69139112 69139132 CAATGTAACAAGTGAGATGGG 58 NA Mus musculus 50 Clip1 ENSMUSG00000049550 ENSMUST00000111566,ENSMUST00000111561,ENSMUST00000031382 1 3 5 80 5 124077410 124080242 AGTAGCAAGGCTAATAGCA 58 124077348 124077366 TTGATTCAAACTGTCCTGC 58 NA Mus musculus 50 Glp2r ENSMUSG00000049928 ENSMUST00000051765 1 1 3 80 11 67555848 67558375 TATCTGTCAGAGATTTCTGCC 59 67555788 67555806 CAACCACAAGTGATTGGTG 59 NA Mus musculus 50 AI314180 ENSMUSG00000050812 ENSMUST00000055822 3 1 6 81 4 58874439 58874459 AAGATTGTTCCTCATCTCCTG 59 58873822 58874399 AACAGTGAGCTGATATCATCTG 59 NA Mus musculus 50 Prkca ENSMUSG00000050965 ENSMUST00000059595,ENSMUST00000100302 3 2 2 80 11 107839595 107839613 GAACACATGATGGATGGAG 57 107822953 107839552 CTGGTAAGCGATTATCTCTG 57 NA Mus musculus 50 Prmt1 ENSMUSG00000052429 ENSMUST00000107843,ENSMUST00000107842,ENSMUST00000107839 1 3 4 91 7 52233639 52234054 CCTCATAAAGGAGGTGGAC 59 52233566 52233584 CGTAGTCGTTCCTCTTCAC 59 NA Nonspecific Mus musculus 50 Hook2 ENSMUSG00000052566 ENSMUST00000064495,ENSMUST00000098561 3 2 2 82 8 87517123 87517230 ACTCGAAGAATGTTCTGGG 59 87517276 87517294 TGCAGGATTTGAGAACTCG 59 NA Mus musculus 50 Tdrd9 ENSMUSG00000054003 ENSMUST00000079009,ENSMUST00000109765 2 2 2 105 12 113278753 113278771 CATCCAGACTTGGTCTGTC 59 113278840 113279882 CAAAGAATACCTCAGCGGA 59 NA Mus musculus 50 Umodl1 ENSMUSG00000054134 ENSMUST00000066554,ENSMUST00000087861,ENSMUST00000066981,ENSMUST00000114555 3 4 4 85 17 31110746 31117300 ACAGATGAAGATTGCCCTC 59 31117348 31117367 GAATTCAAACTCCAGGACAC 58 NA Mus musculus 50 MGI:98976 ENSMUSG00000054626 ENSMUST00000067782,ENSMUST00000114814,ENSMUST00000114810,ENSMUST00000067763 3 4 4 135 X 51098672 51098960 GGAGATACACGATCTCCAG 58 51091088 51091107 GTTCTAATTTCACGTTGCTG 57 NA Mus musculus 50 Emcn ENSMUSG00000054690 ENSMUST00000106260 3 1 4 104 3 137042874 137079702 GAAGTTACTACTCAACTACTGG 57 137079766 137080020 ATCCTCAGTATCTTGAAGCA 58 NA Mus musculus 50 4930543L23Rik ENSMUSG00000055867 ENSMUST00000069631 3 1 1 71 11 58974891 58974909 AAAGTCTTCCCACAACCTC 59 58974838 58974856 GTCCAAACATCCTTTCTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 AB124611 ENSMUSG00000057191 ENSMUST00000076326 1 1 2 154 9 21333454 21333472 ATATGGTGTGATGGGTGAG 58 21344319 21345038 AGGACATGTCTGTATTGGTG 59 NA Mus musculus 50 Xlr5a ENSMUSG00000058328 ENSMUST00000078574,ENSMUST00000114520 3 2 4 122 X 70354045 70355274 TTTGAAGAAAGCCAACGAC 58 70353845 70353959 TCTTGATCTTGGGTTTCCA 58 NA Nonspecific Mus musculus 50 Phtf1 ENSMUSG00000058388 ENSMUST00000063717,ENSMUST00000090685 3 2 3 94 3 103787012 103789679 CTTTACCTCATGCAAGTCAC 58 103789736 103789754 AGTAGCATAAGGCACAAGG 59 NA Mus musculus 50 Hnrpa3 ENSMUSG00000059005 ENSMUST00000111964,ENSMUST00000111962,ENSMUST00000090792,ENSMUST00000076974,ENSMUST00000111961 1 5 5 106 2 75499783 75499801 CTTGTGTTGAAGAGGTGGA 59 75499870 75499967 AGGCTTTACAGAATCCTCTC 58 NA Nonspecific Mus musculus 50 5730460C07Rik ENSMUSG00000062046 ENSMUST00000081193 3 1 1 123 3 153454331 153454349 CTGGAAAGCATAGACTCCC 59 153453723 153453742 TTCAGTTGATATCCTTGGGC 59 NA DesignNoJunction, InUTR Mus musculus 50 Crem ENSMUSG00000063889 ENSMUST00000025069 3 1 6 88 18 3325419 3325438 GAAGTGTAACACGTTCTGTG 59 3299298 3325369 TACAGAAACCTGAGCTAGAG 58 NA Mus musculus 50 Dzip3 ENSMUSG00000064061 ENSMUST00000114516,ENSMUST00000023327 1 2 2 80 16 48935657 48935676 AAGCTGCTGTAGATAGTTGG 59 48933993 48935615 GTTCATTGTACTGTGTCCTG 58 NA Mus musculus 50 Fbxl12 ENSMUSG00000066892 ENSMUST00000086458,ENSMUST00000086459,ENSMUST00000115552 1 3 3 75 9 20443029 20443047 CTGTCCTGGAGAGTTTGTG 59 20442972 20442990 GAGGACACAATCTGAGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ssxb12 ENSMUSG00000068218 ENSMUST00000101693,ENSMUST00000096511,ENSMUST00000115584 2 3 3 62 X 7948917 7948935 ATGTAGAAGGAAGCCTTGC 59 7948961 7951830 GAATGCCACTAGTTTCTGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Ank3 ENSMUSG00000069601 ENSMUST00000092431 1 1 7 98 10 69367011 69383197 CGATGAAGGTGATAAATGCA 58 69390461 69390479 AGATACTTGTCAGTGTCCC 58 NA Mus musculus 50 Ube2u ENSMUSG00000069733 ENSMUST00000106979 2 1 2 124 4 100154275 100155387 GCAATTCAGTTTGTGAAGG 57 100155473 100159265 GGTATATGGGTCTACATTTGG 57 NA Mus musculus 50 Wdfy1 ENSMUSG00000073643 ENSMUST00000113515,ENSMUST00000113514,ENSMUST00000113513,ENSMUST00000113512,ENSMUST00000113511,ENSMUST00000113510,ENSMUST00000048820 2 7 8 94 1 79718833 79730382 CTGTGATGGAATTTCACGT 58 79715818 79715836 GAAGATGATAGCAGACACG 57 NA Mus musculus 50 Olfr32 ENSMUSG00000075066 ENSMUST00000099755,ENSMUST00000111505 2 2 2 60 2 89978949 89978967 CTCTTGCTTACAGTGATGG 57 89978907 89978926 TGTAGTAAAGAGGTTTGCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr988 ENSMUSG00000075222 ENSMUST00000111597,ENSMUST00000099928 3 2 2 60 2 85193772 85193790 ATGTTACAGCTACTAGCCT 57 85193730 85193749 TAGCAGCTAAGATGAAGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lrrc55 ENSMUSG00000075224 ENSMUST00000111601 3 1 2 196 2 85030158 85032075 GAGATTTGACACAGATCTTTGG 59 85029983 85030001 GGAGCCAAGATAGAAAGCT 59 NA InUTR Mus musculus 50 IGKV1-88 ENSMUSG00000076535 ENSMUST00000103336 2 1 1 60 6 68812434 68812453 CTATTTGTCTTGGTACCTGC 58 68812393 68812411 AATCCCATAGATGAGGAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Eif5a ENSMUSG00000078812 ENSMUST00000071026,ENSMUST00000070996,ENSMUST00000043419,ENSMUST00000108612,ENSMUST00000108611,ENSMUST00000108610,ENSMUST00000108613,ENSMUST00000108609,ENSMUST00000108608,ENSMUST00000108607 3 10 10 163 11 69731421 69731440 CATCAAACGGAATGACTTCC 59 69730994 69731107 GCACTGTGATCAGGATCTC 59 NA Mus musculus 50 0610010B08Rik ENSMUSG00000078886 ENSMUST00000109009,ENSMUST00000109008 2 2 4 60 2 175975446 175975465 AGAACATACGATTGAAGACC 57 175975488 175976663 ACTTCTTTCATGCCTTCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 A2ARL5_MOUSE ENSMUSG00000078893 ENSMUST00000109038,ENSMUST00000109037 2 2 3 60 2 175550388 175550407 AGAACATACGATTGAAGACC 57 175550430 175551603 ACTTCTTTCATGCCTTCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Birc1-rs1 ENSMUSG00000078942 ENSMUST00000109357 2 1 2 120 13 101067004 101071303 TTCTACAGTGGTGGATCAG 58 101066902 101066920 GTTCAGGAACTCTTCAGGA 58 NA Mus musculus 50 Serpina3m ENSMUSG00000079012 ENSMUST00000055089 3 1 1 109 12 105629892 105629910 CTTACAACCAGAGACCCTG 59 105630895 105630913 TGTCCTTCAGGTTGTAGTC 58 NA DesignNoJunction Mus musculus 50 Trappc2 ENSMUSG00000079317 ENSMUST00000116495,ENSMUST00000112194 3 2 4 132 X 162887742 162887761 AGTTTATAGCTCATGCTGCT 59 162887856 162888570 AATCTCATATGCCCTGCAG 59 NA Mus musculus 50 Q0ZNK3_MOUSE ENSMUSG00000079579 ENSMUST00000114682 3 1 1 60 X 61404806 61404824 AAAGAAACCCTAGTCAGCT 58 61404764 61404783 TTTGGACTGCTAGAATGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sycn ENSMUSG00000080171 ENSMUST00000116338,ENSMUST00000116337 1 2 2 60 7 29326010 29326029 GACCTGAAGAAGTCAGATGG 59 29326049 29326070 ATGGATCACTCTTCTCATAGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-27a ENSMUSG00000065444 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-185 ENSMUSG00000065464 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 A2A4T2_MOUSE ENSMUSG00000078267 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Scml2 ENSMUSG00000000037 ENSMUST00000101113,ENSMUST00000087090,ENSMUST00000112348,ENSMUST00000074802,ENSMUST00000112345,ENSMUST00000112342,ENSMUST00000019101,ENSMUST00000077375 3 8 8 80 X 157615240 157615979 TTTCAGACAGTCTAAGACTCC 58 157616021 157616039 TCAATATTGCGAGGGTCAC 59 NA Nonspecific Mus musculus 50 Cox5a ENSMUSG00000000088 ENSMUST00000000090 3 1 1 88 9 57376872 57378059 GCGTAAAGGGATGAATACAC 58 57378110 57378128 TTAACCGTCTACATGCTCG 59 NA Mus musculus 50 Oprm1 ENSMUSG00000000766 ENSMUST00000000783 2 1 21 62 10 3508136 3516061 GATCGAACTAACCACCAGG 59 3508092 3508112 GGATAGACATCTGCATTTCAG 58 NA DesignNoJunction Mus musculus 50 Pxmp4 ENSMUSG00000000876 ENSMUST00000000896 2 1 2 135 2 154418004 154418023 TATAAGAGTCTCCATGCCCT 59 154413816 154417906 GGTACATGTTGATCTGGCT 59 NA Mus musculus 50 Cugbp2 ENSMUSG00000002107 ENSMUST00000002176,ENSMUST00000114934,ENSMUST00000100429,ENSMUST00000114927 2 4 5 108 2 6545761 6585174 AAACTTTACCTGGGATGCA 59 6536823 6536842 CATTTCTTGGAAACCATTCC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Shh ENSMUSG00000002633 ENSMUST00000002708 2 1 1 106 5 28785136 28787872 TGTGAAAGCAGAGAACTCC 59 28785048 28785066 GACGTAAGTCCTTCACCAG 59 NA DesignRelaxed Mus musculus 50 Gnmt ENSMUSG00000002769 ENSMUST00000002846 3 1 1 161 17 46863120 46863226 TACTATAAGAGTGACCTGACC 57 46862890 46862908 ACAGTGTGGGTAGTAAGAG 57 NA Mus musculus 50 Apoc2 ENSMUSG00000002992 ENSMUST00000003074 1 1 1 88 7 20258723 20258908 ATGTTGGGAAATGAGGTCC 59 20258653 20258671 TAACTTAAGAGGGAGCCCT 59 NA Mus musculus 50 NP_001074450.1 ENSMUSG00000003360 ENSMUST00000003450 1 1 1 80 15 98482021 98482358 AAGATGCTGGAAGATCCTC 58 98481959 98481977 ATCCTCATTTCCGTTGGTC 59 NA Mus musculus 50 Tyr ENSMUSG00000004651 ENSMUST00000004770 3 1 1 157 7 94577789 94586459 CTCCAAGAGTCAGATCCAG 58 94577650 94577668 TTCTTCTGAAGGCATAGCC 59 NA Mus musculus 50 Crbn ENSMUSG00000005362 ENSMUST00000113239,ENSMUST00000049675,ENSMUST00000013882 2 3 3 86 6 106740981 106744195 ACACAGTCAGATGGAATCC 58 106740913 106740931 TTCTAACTGCACTGCAGAC 59 NA Mus musculus 50 Eps15l1 ENSMUSG00000006276 ENSMUST00000006439,ENSMUST00000098628,ENSMUST00000109977 3 3 3 90 8 74906641 74906659 AAGGTCAGTAAAGGCATCG 59 74906302 74906587 TTGAACTGTCTGGAATGGG 59 NA Mus musculus 50 Zfp184 ENSMUSG00000006720 ENSMUST00000006903,ENSMUST00000102978 3 2 2 82 13 22042126 22042145 ATGATTTCCCAACTAGAGCA 58 22042190 22050302 TTCTTCCAGTCTTCCAAGG 58 NA Mus musculus 50 2310003L06Rik ENSMUSG00000007457 ENSMUST00000007601 2 1 1 83 5 88399696 88399714 ATCCTAACTGTGATCACCT 57 88400488 88400506 TTGTTGATTGCTCTGACTG 57 NA DesignNoJunction Mus musculus 50 Arpp19 ENSMUSG00000007656 ENSMUST00000007800 2 1 1 125 9 74900095 74900113 CAAGGTATCCTCACTTGGG 59 74904481 74904499 GCTTGTTCTTCATCTTTGC 57 NA DesignNoJunction Mus musculus 50 Rhoa ENSMUSG00000007815 ENSMUST00000007959 3 1 1 84 9 108230003 108230021 GTTCCCAGAGGTCTATGTG 59 108230069 108233216 TAAAGCCAACTCTACCTGC 59 NA Nonspecific Mus musculus 50 Srp14 ENSMUSG00000009549 ENSMUST00000110862 2 1 2 148 2 118304762 118305125 CCCTCAAGAAATATGACGGT 59 118304633 118304651 CCTTAAGAAAGGCCTCCAG 59 NA Mus musculus 50 Cox4i2 ENSMUSG00000009876 ENSMUST00000010020,ENSMUST00000109821 2 2 2 130 2 152586385 152586403 CAGTTCCATGAAACCTTCG 58 152586496 152590490 TTAGGGAACACATAGACTCG 58 NA Mus musculus 50 EG545936 ENSMUSG00000011350 ENSMUST00000073390 2 1 1 81 7 25613326 25613344 CATACCAGTGTGAGGTCTC 59 25613389 25622558 TTTGACGGTTGATAGAGCA 58 NA InUTR Mus musculus 50 Ccnt1 ENSMUSG00000011960 ENSMUST00000012104 2 1 1 80 15 98390749 98395490 GTTTCATCGATATTCCATGGC 59 98390689 98390708 ACATGCTCCAATTTCTTTGG 59 NA Mus musculus 50 1810033B17Rik ENSMUSG00000013974 ENSMUST00000014118 2 1 1 92 8 3667474 3667492 TCAAGGAGGTCAAGAAGAC 58 3667548 3668203 TTTGGGTTATATCTGCCGG 59 NA Mus musculus 50 Nol3 ENSMUSG00000014776 ENSMUST00000014920 1 1 1 80 8 107803660 107803800 GAGGATGAATCTGAAGATTCCT 59 107803840 107803859 CAGGTTTCCAGGTCTTATCC 59 NA InUTR Mus musculus 50 Nipsnap3a ENSMUSG00000015247 ENSMUST00000015391 2 1 2 110 4 53029978 53029996 AGGAACGATTCCTCATTCC 59 53030070 53033062 CATAGACTCCTTCCTTGGG 58 NA Mus musculus 50 Il19 ENSMUSG00000016524 ENSMUST00000016668,ENSMUST00000112465 1 2 2 83 1 132829812 132831561 CTACAATCAGCTGGAGGTC 59 132829747 132829765 TGATTCCTGTCAATCCAGG 58 NA Mus musculus 50 Nlrp14 ENSMUSG00000016626 ENSMUST00000084763,ENSMUST00000016770 2 2 2 120 7 114340819 114341297 TGGAATTTCTAGCGTTAGAC 57 114341377 114341398 CTTTCTGTATTAGGACACTCTG 57 NA Mus musculus 50 Hal ENSMUSG00000020017 ENSMUST00000016031 2 1 1 84 10 92957487 92959340 GCTAAATATGTTCTAGAAGCCC 58 92960229 92960247 TCTGTGTCCCATTGATGAG 58 NA Mus musculus 50 Best3 ENSMUSG00000020169 ENSMUST00000020378 1 1 1 80 10 116439661 116439679 AAATCTTGCAACCAAAGCC 59 116439720 116440951 CGATTCATTTCAGTCATCAGTG 59 NA Mus musculus 50 Nav3 ENSMUSG00000020181 ENSMUST00000032719 3 1 1 100 10 109157079 109157098 TTTCTAGTATCAACAGCGCA 59 109156128 109157016 TCCTCTAGAGTTCACCCAG 59 NA Mus musculus 50 Spnb2 ENSMUSG00000020315 ENSMUST00000094333 3 1 5 60 11 30119552 30119570 CCTGATGTTGTATGTCCCA 58 30119510 30119529 AATGGTTGATGTTCAAGGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hnrpab ENSMUSG00000020358 ENSMUST00000109103,ENSMUST00000074669,ENSMUST00000101249 2 3 3 129 11 51418004 51418022 TGAGCTTCCAATAGATCCC 58 51416189 51417911 GATTTCACACTTGCTTCCA 58 NA Mus musculus 50 Ubxd4 ENSMUSG00000020634 ENSMUST00000020962 3 1 1 118 12 4890780 4892537 AGACTAGGAAGTGCTACAC 57 4890680 4890698 ATCTGGATCCTGGTAATGG 58 NA Mus musculus 50 Mrpl38 ENSMUSG00000020775 ENSMUST00000106439,ENSMUST00000054135 1 2 2 80 11 115995747 115995767 CACTGCTATTCATCAACTTGG 59 115994202 115995574 TTGGGATGTTGGTTAGCAG 59 NA Mus musculus 50 Ntn1 ENSMUSG00000020902 ENSMUST00000021284,ENSMUST00000108674 3 2 2 83 11 68071002 68074008 CCTTGCATCAAGATTCCTG 58 68040093 68040111 CTTGCAATAGGAGTCACAG 57 NA Mus musculus 50 Ptpn21 ENSMUSG00000021009 ENSMUST00000085116 2 1 1 81 12 99949101 99953247 CAGGAGATTACCAGGTATCAG 59 99949040 99949059 CGTGTTCTAATGTACAGGGA 59 NA Mus musculus 50 1110008L16Rik ENSMUSG00000021023 ENSMUST00000021411 1 1 1 80 12 56480454 56483254 TAACTTTCCAGCATATCCTCAG 59 56483292 56483313 GGTCTTCATCATAAGGAATGTG 58 NA Mus musculus 50 Lman2 ENSMUSG00000021484 ENSMUST00000021940 3 1 1 101 13 55452584 55452602 GTGGAAGAACTGCATTGAC 59 55449780 55452519 ATGATGTCGTGGTTGTCAG 59 NA Mus musculus 50 BC021381 ENSMUSG00000021495 ENSMUST00000021957 3 1 1 68 13 55643072 55643951 CTTCAAGAGGTTCTGTTTGG 58 55643023 55643041 AAGTTGGTCCAGTTCACAG 59 NA DesignRelaxed Mus musculus 50 Lect2 ENSMUSG00000021539 ENSMUST00000062806,ENSMUST00000109886 3 2 2 86 13 56647122 56648174 AGTACTCTGCTCAAAGAACC 59 56647055 56647073 CAGTGAATGGTGCATACAC 58 NA Mus musculus 50 Dapk1 ENSMUSG00000021559 ENSMUST00000077453,ENSMUST00000044083 2 2 2 80 13 60819668 60819688 GAGATAGTCAACTATGAGCCC 59 60819814 60820980 CCCACTTAGGAGGATATAGGT 59 NA Mus musculus 50 Ktn1 ENSMUSG00000021843 ENSMUST00000089901,ENSMUST00000022391,ENSMUST00000111745,ENSMUST00000111744,ENSMUST00000111743,ENSMUST00000070762 2 6 6 80 14 48294533 48296370 TTGACTCAGGAAATGATGAC 57 48296413 48296431 TTCTAGTGTTCCAATCCGA 57 NA Mus musculus 50 Sema3g ENSMUSG00000021904 ENSMUST00000090180 3 1 1 137 14 32035622 32035748 ACTTTGACCAGCTAGAGGA 59 32036140 32036158 CCCAGATGTCTACCATGTG 59 NA Mus musculus 50 Glt8d1 ENSMUSG00000021916 ENSMUST00000022476 3 1 1 80 14 31823280 31823299 GGTTCTACTTGCCAATTCTG 58 31823339 31823491 GTATGTCACCTTGTACAATGAC 59 NA Mus musculus 50 Ctsb ENSMUSG00000021939 ENSMUST00000006235 2 1 1 85 14 63757256 63757274 GAAGGAGATACTCCCAGGT 59 63757323 63757845 GAAGTGTACCCAAAGTGCT 59 NA Mus musculus 50 Cacna2d3 ENSMUSG00000021991 ENSMUST00000022567 2 1 1 80 14 29916923 29918150 AGAACGAAACTAGGTCAAAGG 59 29916863 29916881 GGATGGTCTTCAGAAGCTC 59 NA Mus musculus 50 Dhrs2 ENSMUSG00000022209 ENSMUST00000022820 1 1 1 82 14 55856157 55857590 GATCTGGGACAAGATCCTG 59 55857636 55857654 TTCTGTTCTCCATGTAGGG 58 NA Mus musculus 50 Ndufb9 ENSMUSG00000022354 ENSMUST00000022980 1 1 1 94 15 58767930 58767948 AATTCTGGCAGAATCAGCA 59 58768006 58768915 TTCTGGAACCTTGTAGCAC 59 NA Mus musculus 50 Grina ENSMUSG00000022564 ENSMUST00000023225 3 1 1 127 15 76078788 76078887 TTATCAGAAAGGTGTTCCTG 57 76078977 76078995 GGAGACATAGTAGGTCCAG 57 NA Mus musculus 50 Mcm4 ENSMUSG00000022673 ENSMUST00000023353 2 1 1 88 16 15627940 15628695 TGTTGTCAAGGTTTGATCTC 58 15627871 15627890 CAATGAAACCAGGTGATGAG 58 NA Mus musculus 50 Thpo ENSMUSG00000022847 ENSMUST00000115437,ENSMUST00000076422 1 2 2 75 16 20728816 20728834 AAATAAACTGCTGCGTGAC 59 20728509 20728527 GATAGACAAAGGGTCGACG 59 NA DesignNoJunction Mus musculus 50 Kpna1 ENSMUSG00000022905 ENSMUST00000004054 1 1 1 80 16 36020862 36021579 GAATTTGCTAAGGTTTCTCCC 59 36021620 36021639 AGCATCAGCTAGTACATCAG 58 NA Mus musculus 50 Slc11a2 ENSMUSG00000023030 ENSMUST00000023774,ENSMUST00000074905 1 2 2 201 15 100242645 100242663 TATCTACCATGGTGTTGGA 57 100239746 100240521 AAACAAGAGTACTCCTCCT 57 NA DesignRelaxed Mus musculus 50 4933430H15Rik ENSMUSG00000023084 ENSMUST00000023846 2 1 1 83 3 87549421 87549442 GAAAGTTGAAGATCGGATTCTG 59 87549211 87549377 ACCTTCCACAAGTTGATGG 59 NA Mus musculus 50 Sgol1 ENSMUSG00000023940 ENSMUST00000024736 1 1 1 80 17 53820803 53822887 GTCCTTACAGCAAATTGCTG 59 53818999 53819017 GTCTCTGGAGTAACAGCAG 59 NA Mus musculus 50 Snf1lk ENSMUSG00000024042 ENSMUST00000024839 2 1 1 84 17 31991208 31991226 ATCTGGAGAAGATCTACCG 57 31988531 31991162 GTCTCCATAACCTGATAAAGC 58 NA Mus musculus 50 Birc6 ENSMUSG00000024073 ENSMUST00000024879 2 1 1 80 17 75030446 75030960 CATGTTCAGTTGGAGTCAC 58 75031004 75031022 TCCATTCTCTTTGTTCCCT 58 NA Mus musculus 50 D6Wsu116e ENSMUSG00000024104 ENSMUST00000036759 3 1 1 80 6 116196209 116196228 TCTGAAGGTTGATAATGCCA 59 116196271 116198004 AAGAGTCCTTCCTTCTGTG 58 NA Mus musculus 50 9130404H23Rik ENSMUSG00000024105 ENSMUST00000024914 2 1 1 103 17 66905597 66908897 AAATCTGCTAGGTGAGACC 58 66905512 66905530 TTTGTCTCATCGTTGTCCT 58 NA Mus musculus 50 Diap1 ENSMUSG00000024456 ENSMUST00000115634,ENSMUST00000115631,ENSMUST00000025337 3 3 5 162 18 38049461 38050144 CAAACTGGTCCAAGTTTGTG 59 38020143 38020161 TCTCCACCTTCTTGATCCT 59 NA Mus musculus 50 4833403I15Rik ENSMUSG00000024481 ENSMUST00000025358 2 1 1 94 18 47040968 47041077 CGCACTTAAGTCTTATTTGGAG 59 47041130 47041150 GTCTGAAAGGGACAATTACCA 59 NA Mus musculus 50 Ptpn2 ENSMUSG00000024539 ENSMUST00000025420 2 1 1 80 18 67871539 67871557 TATCCTCATAGAGTGGCCA 59 67855365 67871495 ACGACTGTGATCATATGGG 58 NA Mus musculus 50 Fech ENSMUSG00000024588 ENSMUST00000091055,ENSMUST00000025484 3 2 2 84 18 64634763 64634781 CATCAAGATGTGGACTTCC 57 64630457 64634715 GTATTTGTGAGGTGCTGTG 58 NA Mus musculus 50 Gps1 ENSMUSG00000025156 ENSMUST00000100134,ENSMUST00000116305,ENSMUST00000106143,ENSMUST00000026153 3 4 4 81 11 120649625 120649643 CTCTGGAAGATGAGCTGAC 59 120649687 120649786 GCATACAGTATCTTGCTGTG 58 NA Nonspecific Mus musculus 50 Jph3 ENSMUSG00000025318 ENSMUST00000026357 3 1 1 70 8 124309303 124309321 CTGGAGATGAGCTCAAGTC 59 124313325 124313343 AATGTTGAGCAGGATCACC 59 NA DesignNoJunction Mus musculus 50 2310003H01Rik ENSMUSG00000025384 ENSMUST00000026448 2 1 1 80 11 120232085 120233432 CGAATACAGACAATGGTCAC 58 120232024 120232043 GATCTGCTGTAGATACTGCA 58 NA Mus musculus 50 Ddit3 ENSMUSG00000025408 ENSMUST00000026475 3 1 1 81 10 126732459 126732477 GTATGAGGATCTGCAGGAG 58 126732522 126732784 TTCTTCCTCTTCGTTTCCT 58 NA DesignNoJunction Mus musculus 50 Rnf165 ENSMUSG00000025427 ENSMUST00000026494 3 1 1 80 18 77701721 77705426 AGTATAAGAAGCGAAGACCC 58 77701660 77701679 TTGTGCATTTCTCATCTGTG 58 NA Mus musculus 50 Phf6 ENSMUSG00000025626 ENSMUST00000078944,ENSMUST00000101587 1 2 2 82 X 50293499 50293517 TAAAGGCTTGCCAGAAGAC 59 50293562 50293726 GAGACCTATCTCGGTAGGAG 59 NA Mus musculus 50 Cnksr2 ENSMUSG00000025658 ENSMUST00000026750,ENSMUST00000112515,ENSMUST00000112513 1 3 3 80 X 154294544 154294562 CAGATACTCCATCGACACC 59 154291558 154294500 CACAACTCATAGAGGGAGG 58 NA Mus musculus 50 Mfsd8 ENSMUSG00000025759 ENSMUST00000026859 2 1 1 82 3 40627873 40630806 GTTTATGAAACAATCCTCACCC 59 40627812 40627831 AGGATTCCATCATAGAGCAC 58 NA Mus musculus 50 Sema4c ENSMUSG00000026121 ENSMUST00000114992,ENSMUST00000114991,ENSMUST00000027295,ENSMUST00000114990,ENSMUST00000114995 3 5 5 81 1 36610613 36610632 CTTCAGCCATACAATTCCTC 58 36610403 36610569 TGAGCATGTTGATGTAGGT 58 NA Mus musculus 50 Ppm1f ENSMUSG00000026181 ENSMUST00000027373 2 1 1 80 16 16911104 16911123 TGAATTTAAGAGGTTGCCTG 58 16911166 16914136 GCATCTAGTAAGGTCACGA 58 NA Mus musculus 50 Lrrfip1 ENSMUSG00000026305 ENSMUST00000068167,ENSMUST00000097650 2 2 4 159 1 93001867 93003885 AGAACAAGGAGTTCGAGAG 58 93005195 93005215 TGAAGATCAGAAATCTCCCTG 59 NA Mus musculus 50 Rabgap1l ENSMUSG00000026721 ENSMUST00000086099 2 1 5 104 1 162237380 162237399 ATTATGGTAGCCTATGACGC 59 162187655 162237313 TTTGGTTGGTACCATGGAC 59 NA Mus musculus 50 Pip4k2a ENSMUSG00000026737 ENSMUST00000006912,ENSMUST00000114645 3 2 3 82 2 18827906 18827924 AAGGAATACTGCCCAATGG 59 18810818 18827860 CTGGTCAAGGAATTCTGGA 58 NA Mus musculus 50 Orc4l ENSMUSG00000026761 ENSMUST00000028098,ENSMUST00000090976 3 2 2 120 2 48792311 48792329 TACTCATTGTTGGACCACG 59 48788676 48789079 TGCAGGAGTCCATTTAAGTG 59 NA Mus musculus 50 Sh3glb2 ENSMUSG00000026860 ENSMUST00000113621,ENSMUST00000100215,ENSMUST00000028214,ENSMUST00000113620 2 4 4 104 2 30201964 30202139 AGTACTCATGTGAACCACC 58 30201878 30201896 TAGCTGTTTCTGCAGATCC 59 NA Mus musculus 50 Ndufa8 ENSMUSG00000026895 ENSMUST00000070112 3 1 1 111 2 35899947 35899965 TAAGGAGTTTATGCTGTGC 57 35895382 35899872 GTGACTCTTTATCTGCCTG 57 NA Mus musculus 50 Rbms1 ENSMUSG00000026970 ENSMUST00000028347,ENSMUST00000112510,ENSMUST00000112509,ENSMUST00000074547 3 4 4 80 2 60680403 60680422 GACAAACCTCTACATCCGAG 59 60635788 60680360 ATCTTCCCATATGGTTGGC 59 NA Mus musculus 50 Prg3 ENSMUSG00000027072 ENSMUST00000028466 1 1 1 105 2 84828940 84829390 TTTCATCTGGAGACTGCTC 58 84829459 84829477 CTTGAGTCAGAGCCAACTC 59 NA Mus musculus 50 Clp1 ENSMUSG00000027079 ENSMUST00000028475 1 1 1 87 2 84564356 84565686 GATTACATCTCGCTTAGCAG 58 84564288 84564306 ACAGGTGTTGATGACACAG 59 NA DesignNoJunction Mus musculus 50 Ccdc34 ENSMUSG00000027160 ENSMUST00000028580 2 1 2 174 2 109858344 109858362 AAGGAATAGAGTTCCAGCA 57 109862166 109872502 TGCTGATTTAATTCCTCCAG 57 NA Mus musculus 50 4930525F21Rik ENSMUSG00000027209 ENSMUST00000110446,ENSMUST00000110448,ENSMUST00000110444,ENSMUST00000028638 3 4 4 84 2 125833065 125926648 CACATACCAGGCATTAGAG 57 125832999 125833018 ACTCTTTCATGAGTTTAGGC 57 NA Mus musculus 50 Tspan18 ENSMUSG00000027217 ENSMUST00000111265,ENSMUST00000028646 1 2 2 80 2 93051075 93051988 TCTTCAGAGAACACCTCAC 58 93051013 93051032 AAACATCCGTATCGTTATCG 57 NA Mus musculus 50 D230010M03Rik ENSMUSG00000027243 ENSMUST00000111323 1 1 3 61 2 91552983 91553001 CAGTTTGAAACTGGGATGC 59 91558803 91558821 AACAATGCTTGTGTAGCAC 58 NA DesignNoJunction Mus musculus 50 Mtch2 ENSMUSG00000027282 ENSMUST00000062223 1 1 5 129 2 90687537 90687682 ATCCAGGAACAACTTCCAC 59 90687775 90687793 AAGTTGAGAAGAGTCACCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rpo1-2 ENSMUSG00000027395 ENSMUST00000103205,ENSMUST00000028874 1 2 2 91 2 128935110 128935129 CTATCTGGGAGAATGCTTCC 59 128935183 128935786 AGATGCACTGGTTAAGCAG 59 NA Mus musculus 50 Car2 ENSMUSG00000027562 ENSMUST00000029078 2 1 1 91 3 14887949 14887968 TTATGATAAAGCTGCGTCCA 59 14888022 14895030 CTTTCAGCACTGCATTGTC 59 NA Mus musculus 50 Mfn1 ENSMUSG00000027668 ENSMUST00000091257 1 1 1 80 3 32430930 32433170 TTGTTGAAGCAACATACAGG 58 32433212 32433231 TTCTGTAGCCCTGTATTTCC 59 NA Mus musculus 50 Smad9 ENSMUSG00000027796 ENSMUST00000029371 3 1 1 82 3 54590230 54593113 CTATCAACACTCAGACTTCC 57 54593156 54593176 GGTTGTTTAGTTCGTAGTAGG 58 NA Mus musculus 50 Sprr2j ENSMUSG00000027925 ENSMUST00000029533 1 1 1 69 3 92222980 92223000 CAAATAAGGGCTTCAGTAGTC 58 92223028 92223049 GCTATGGACTTATGTAAGATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxw7 ENSMUSG00000028086 ENSMUST00000107677 2 1 2 150 3 84769295 84771370 TCCTAAAGAGTTGGCACTC 58 84771482 84771502 TGTGATTCTGAACTTACCCTC 59 NA Mus musculus 50 Gpr89 ENSMUSG00000028096 ENSMUST00000029738 2 1 1 81 3 96693906 96694737 CTACTTCCTCAGGAACGTG 59 96693843 96693862 GCTTATGATCATGTCCATGG 58 NA Mus musculus 50 Sdcbp ENSMUSG00000028249 ENSMUST00000029912,ENSMUST00000103008,ENSMUST00000108371,ENSMUST00000108374 1 4 4 83 4 6306120 6306138 CTGCTTATTCTGCCAATCC 58 6306183 6308145 GATACAGATTTCCATCTGGAG 57 NA Mus musculus 50 Rnf20 ENSMUSG00000028309 ENSMUST00000029989,ENSMUST00000098079 3 2 2 82 4 49666140 49667071 GAAGACTCAGGTAGATGCC 59 49667117 49667135 CTGTGCCAATGTTACTCTG 58 NA Mus musculus 50 1300002K09Rik ENSMUSG00000028327 ENSMUST00000107783,ENSMUST00000107782,ENSMUST00000030011,ENSMUST00000095099 3 4 4 80 4 45886659 45890785 ATCAGCGTTACTAAAGGAGTC 59 45890824 45890845 TAGAATGTGGAAGAGATAGGTG 58 NA Mus musculus 50 MGI:1891840 ENSMUSG00000028330 ENSMUST00000030014 2 1 1 80 4 46180258 46181331 CCATCCACAGATGATTGCT 59 46181375 46181393 ATCCAGTTTGCTACTGCTG 59 NA Mus musculus 50 Tnfrsf8 ENSMUSG00000028602 ENSMUST00000030339 1 1 1 80 4 144878409 144882505 CAGATCCAGGTAATGCAGAG 59 144878348 144878366 TTTCTGAGGTGCTGATGTC 59 NA Mus musculus 50 Fusip1 ENSMUSG00000028676 ENSMUST00000105853 2 1 4 117 4 135419110 135419448 CCTAGAAACAGTAGACCGA 57 135419681 135419699 ACCGTGATCTTGAATTGGA 58 NA DesignRelaxed Mus musculus 50 Htr6 ENSMUSG00000028747 ENSMUST00000105802,ENSMUST00000068036 3 2 2 71 4 138618021 138618039 AGCATGTTCTTTGTCACCT 59 138617758 138617776 AGAGATGCAGTCACATACG 59 NA DesignNoJunction Mus musculus 50 Acot7 ENSMUSG00000028937 ENSMUST00000075363,ENSMUST00000030779,ENSMUST00000105652 1 3 3 81 4 151591988 151597184 GAACATCCTCACAGGTACC 59 151597226 151597247 CTTGTCCACATTCTTCAATGAC 59 NA Mus musculus 50 1700016H13Rik ENSMUSG00000029320 ENSMUST00000031261 3 1 1 95 5 104077968 104078453 CCTTCAATGCAATCCATGG 59 104077891 104077909 AGCCTGGATTTCCTTACAC 59 NA Mus musculus 50 Slc15a4 ENSMUSG00000029416 ENSMUST00000031367,ENSMUST00000075376 2 2 2 101 5 128084982 128085000 TTCACAGAGGACAAAGTGG 59 128084550 128084919 GGTCTGCATTTGGAAATACAC 59 NA Mus musculus 50 Cabp1 ENSMUSG00000029544 ENSMUST00000112109,ENSMUST00000031519 3 2 3 163 5 115626275 115630814 AGAACAGACAACCTGACAG 59 115625413 115625431 CTCAATGAGCTCCATCTCG 59 NA Mus musculus 50 Foxp2 ENSMUSG00000029563 ENSMUST00000115470 3 1 4 75 6 15147085 15147103 CTGAAGTAAGCACAGTGGA 59 15147142 15147160 TTAAGGGAAGCTTTGAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Col1a2 ENSMUSG00000029661 ENSMUST00000031668 3 1 1 80 6 4487972 4487990 CTCTAGAAAGAACCCTGCT 58 4488033 4488641 TCAATCCAGTAGTAATCGCT 58 NA Mus musculus 50 Hrbl ENSMUSG00000029722 ENSMUST00000100544,ENSMUST00000031736 2 2 2 88 5 138093735 138095000 CAGCAGAATGGATCTTCCT 59 138093665 138093683 GGATTGGTAGAGATCCCAG 58 NA Mus musculus 50 Pcyox1 ENSMUSG00000029998 ENSMUST00000032065 1 1 1 96 6 86342333 86344411 GTTCATGAGGATCTACCGT 58 86342255 86342273 CAGTCTGACGTAGTCATCC 59 NA Mus musculus 50 Klrb1f ENSMUSG00000030154 ENSMUST00000032257 2 1 1 81 6 129002503 129002522 CATTTGGCTCTGAAATCTGG 59 129002563 129003209 GGAATCTCACTAAGACACTGAG 59 NA Mus musculus 50 Thumpd3 ENSMUSG00000030264 ENSMUST00000032398 1 1 1 81 6 112997635 112997653 CTGCAGAATCAGCAAAGAC 59 112997696 112999350 TGATCTCAGACAATGAACCTG 59 NA Mus musculus 50 BC060267 ENSMUSG00000030321 ENSMUST00000032468 3 1 1 156 6 115770191 115770209 CTCTGAAGAACCAAGAGCT 58 115767832 115770071 CAGAGAAACCACTCCTTGG 59 NA Mus musculus 50 4632434I11Rik ENSMUSG00000030641 ENSMUST00000032877 3 1 1 102 7 100010910 100010928 TGAAAGTGGCAGAATCCAG 59 100010019 100010845 TCAAGGTACCTGTGTAAACC 59 NA Mus musculus 50 Dgat2 ENSMUSG00000030747 ENSMUST00000033001 3 1 1 60 7 106306837 106307360 AGTACCTGATGTCTGGAGG 59 106306795 106306815 GAGAGCAAGTAGTCTATGGTG 59 NA DesignNoJunction Mus musculus 50 Cd37 ENSMUSG00000030798 ENSMUST00000033063,ENSMUST00000098461,ENSMUST00000107797 3 3 3 60 7 52492380 52492398 ATCCTCATTTCCACTCAGC 59 52491556 52491574 TCCTCAACACCAATTCCTG 59 NA DesignNoJunction Mus musculus 50 Plk1 ENSMUSG00000030867 ENSMUST00000033154 2 1 1 82 7 129307746 129311122 CAATAAAGGTGTGGAGAACC 58 129311167 129311185 CAATGGCCTCATTTGTCTC 58 NA Mus musculus 50 Proz ENSMUSG00000031445 ENSMUST00000033822 2 1 1 81 8 13063343 13063362 GAGAAGGAGTGTTATGAGGA 58 13063406 13064611 AGAACTCATCCGTGATGAC 59 NA Mus musculus 50 Agpat6 ENSMUSG00000031545 ENSMUST00000033949 2 1 1 81 8 24286099 24289896 GGCTATCAAGTATGACCCTC 59 24286037 24286055 CATCCTCAGAAGGTACGTC 59 NA Mus musculus 50 Nr3c2 ENSMUSG00000031618 ENSMUST00000109913,ENSMUST00000109912,ENSMUST00000109915,ENSMUST00000034031 1 4 4 80 8 79679151 79679170 ATTCGGAGAAAGAACTGTCC 59 79679213 79709688 CTTTGACTTTCGAGCTCCT 59 NA Mus musculus 50 Txnl4b ENSMUSG00000031723 ENSMUST00000034159 3 1 1 136 8 112095409 112096598 AAGGTGGATTATGGGTCTC 58 112096697 112096716 GGATCAATAGGACTCTGGAC 58 NA Nonspecific Mus musculus 50 Pmfbp1 ENSMUSG00000031727 ENSMUST00000034162 1 1 1 80 8 112044862 112044880 GAGTTTGCTTCCTACACAG 58 112044922 112048995 CTTCAGGATCTTTGTGATGTC 58 NA Mus musculus 50 1110012M11Rik ENSMUSG00000031813 ENSMUST00000034272 3 1 1 95 8 74067298 74067316 AATGTGGTAGTGGACATGC 59 74067375 74069133 CACAGAGGCCTTGATATCC 59 NA Mus musculus 50 Tmem24 ENSMUSG00000032120 ENSMUST00000065080,ENSMUST00000085976,ENSMUST00000034634 3 3 3 118 9 44121677 44121695 TGAGACAACACGTTCAGAC 59 44119339 44121595 GCAGGAAACTCACTTTGTG 59 NA Mus musculus 50 AI118078 ENSMUSG00000032313 ENSMUST00000085754,ENSMUST00000034862 2 2 2 108 9 55262877 55265825 TCATTGATGCCTATGTCCTG 59 55265896 55265914 ATTTGCGTCAGTCTTTCCA 59 NA Mus musculus 50 2810026P18Rik ENSMUSG00000032424 ENSMUST00000034997 1 1 1 86 9 88416802 88417152 TTTAAAGGTGAATGCTGACC 58 88416534 88416552 CAAGTTCTTGTGTCACTGG 58 NA Nonspecific, InUTR Mus musculus 50 Gab3 ENSMUSG00000032750 ENSMUST00000114110,ENSMUST00000037374,ENSMUST00000114104 3 3 4 80 X 72270163 72270183 CCAGGGTATACTATGGTACCA 59 72250697 72270122 GCTTTGTACATCACCTTTCC 59 NA Mus musculus 50 Slc24a6 ENSMUSG00000032754 ENSMUST00000076051,ENSMUST00000068326,ENSMUST00000111890 3 3 3 176 5 120971092 120971110 CCTAACCTTCACTGCACTC 59 120971868 120974023 GACTCAGACAGCAACTCTG 59 NA Mus musculus 50 Bet1 ENSMUSG00000032757 ENSMUST00000049166 2 1 1 63 6 4032483 4032502 AGACTCACTGAAAGTCTGAG 58 4029999 4032459 GGCCTATTTCAATGGAAAGAG 59 NA DesignNoJunction Mus musculus 50 Alas1 ENSMUSG00000032786 ENSMUST00000112524 2 1 1 208 9 106140565 106140986 CATTCAATGGATGGAGCAG 58 106139009 106139027 ATGTATCCTCCAACACAGC 59 NA DesignRelaxed Mus musculus 50 Fbxo21 ENSMUSG00000032898 ENSMUST00000035579 3 1 1 88 5 118450525 118452029 TGAAGCATAAGAGGTACGG 58 118452081 118452099 ATTCATGTTTCGGATCCAC 57 NA Mus musculus 50 Fkbp1a ENSMUSG00000032966 ENSMUST00000044011,ENSMUST00000050712 3 2 5 126 2 151383144 151383162 ATTTGATTCCTCTCGGGAC 59 151385210 151385229 GGAGATTATCAGTTTGGCTC 58 NA DesignNoJunction Mus musculus 50 Mgll ENSMUSG00000033174 ENSMUST00000113585,ENSMUST00000089449 1 2 4 121 6 88759431 88768576 GACTTTGAAGGTCCTTGCT 59 88773188 88773206 GGTCAGAGTTGTACAGGTC 59 NA Mus musculus 50 Specc1l ENSMUSG00000033444 ENSMUST00000105421,ENSMUST00000040105 2 2 2 89 10 74730257 74730275 GTGGTCCAATCTCAACCTC 59 74730325 74736773 TTAGTAGATGCTCTTGTACAGG 59 NA Mus musculus 50 Cdc14a ENSMUSG00000033502 ENSMUST00000090464,ENSMUST00000106491 2 2 2 82 3 116035765 116035783 CTTCAACTGGATCGTTCCA 59 116031616 116035719 GGAGAGGGTAACCATTCTC 58 NA Mus musculus 50 Vhlh ENSMUSG00000033933 ENSMUST00000035673 2 1 1 80 6 113578199 113579387 ACATTGCCAGTGTATACCC 59 113579430 113579449 CAGTCTCCTGTAGTTCTCAG 58 NA Mus musculus 50 Zfp446 ENSMUSG00000033961 ENSMUST00000045810,ENSMUST00000108535,ENSMUST00000108536 1 3 5 80 7 13564988 13565245 GGAGATGGTATCTCCAAGTG 59 13565288 13565306 GATATGGAGACCGTTTCCT 58 NA Mus musculus 50 Coil ENSMUSG00000033983 ENSMUST00000036649,ENSMUST00000107898 2 2 2 84 11 88849368 88851986 CTCAGGAGAAGAGGATCAC 58 88852034 88852052 GTACTCGAGATGCTACCTG 58 NA Mus musculus 50 Faah ENSMUSG00000034171 ENSMUST00000051237,ENSMUST00000049095 2 2 2 80 4 115677011 115677029 GAAAGCCCTACTTTGTGAG 58 115675697 115676967 CTTCTGTAGATCTCCTCCC 57 NA Mus musculus 50 Atm ENSMUSG00000034218 ENSMUST00000037440 2 1 1 80 9 53305287 53305305 CTCTGAAGTTTCAGCAGAC 58 53304118 53305245 GAGAATCACATAACAGTCCTC 57 NA Mus musculus 50 Arhgap5 ENSMUSG00000035133 ENSMUST00000101435 3 1 2 85 12 53643614 53645194 GAAGACACAGATAAATGGAGAG 58 53645238 53645258 TCTGCAGAGATATGTGATCTC 58 NA InUTR Mus musculus 50 Arl5a ENSMUSG00000036093 ENSMUST00000036541 3 1 1 193 2 52267587 52267605 CTCTACAAGATGCTAGCCC 59 52257935 52260426 TCAAGTCCTTGGCATAACC 59 NA DesignNoJunction Mus musculus 50 Slc2a13 ENSMUSG00000036298 ENSMUST00000109283,ENSMUST00000036723 1 2 2 80 15 91152047 91152065 CTGTCATTGATTCCTCCTG 57 91106903 91152004 TGGTTTCATTATCACACCTG 57 NA Mus musculus 50 Fgf1 ENSMUSG00000036585 ENSMUST00000040647,ENSMUST00000115582 1 2 3 82 18 39006746 39006764 TATAAAGGGTACGGAGACC 57 39001757 39001775 ATTCCTCATTTGGTGTCTG 57 NA DesignNoJunction Mus musculus 50 Trpv5 ENSMUSG00000036899 ENSMUST00000031901 2 1 1 81 6 41620982 41624233 AAGAAGAAAGAGGCTCGAC 59 41620919 41620938 GCTGTCCATATTTCTTCCAC 58 NA Mus musculus 50 Pax1 ENSMUSG00000037034 ENSMUST00000109968,ENSMUST00000047382 3 2 2 219 2 147193746 147194123 ATATACTCAGTCGGCTTCC 58 147194306 147194324 GTGTTTGAAGGTCATTGCC 59 NA DesignRelaxed Mus musculus 50 Zc3h7a ENSMUSG00000037965 ENSMUST00000037633 2 1 1 80 16 11158677 11158785 TAGAGCTGAGCACTTACTG 58 11156623 11156641 GGCTCAATATCTTCCACAG 57 NA Mus musculus 50 Cntnap5c ENSMUSG00000038048 ENSMUST00000076038 2 1 1 80 17 58153370 58174273 CTATGGATGTTCCTACAGATCAG 59 58174312 58174331 ATTGTCTTCTGGTTGAACCT 59 NA Mus musculus 50 D530005L17Rik ENSMUSG00000038070 ENSMUST00000047023,ENSMUST00000107190 3 2 3 103 4 84761260 84761278 AAACCTCAACGCATAAAGC 59 84761343 84764354 CTCAATTTCCAGTTCATCCTC 58 NA Mus musculus 50 Hspb2 ENSMUSG00000038086 ENSMUST00000042790 2 1 1 61 9 50559498 50559517 ATGGCATCCTTAACTTGGAG 59 50559456 50559474 TTCATTGACTTCCGTGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 D630037F22Rik ENSMUSG00000038122 ENSMUST00000099739 3 1 1 80 10 55769677 55771206 AATGACTGTCAGGTATGGG 58 55769615 55769634 CAATGCTTTAAGACCAAAGC 57 NA Mus musculus 50 Cldn16 ENSMUSG00000038148 ENSMUST00000115302 2 1 1 81 16 26474367 26477585 CAGAACATCCCTTGAAGCT 59 26477630 26477648 AGGGTGATGAATCCAAAGC 59 NA Mus musculus 50 Cbfa2t2 ENSMUSG00000038533 ENSMUST00000109725,ENSMUST00000045270,ENSMUST00000109720,ENSMUST00000109717,ENSMUST00000099178,ENSMUST00000109718 3 6 7 82 2 154346905 154346924 AAGATGAGTTGGTAGACCAC 59 154346969 154349654 AATGCAATTCAGTGCATGG 59 NA Mus musculus 50 1700129I04Rik ENSMUSG00000038570 ENSMUST00000040353,ENSMUST00000056728 2 2 2 82 7 89792172 89792190 AAAGGAAAGTTGGACACTG 57 89783869 89783887 TCTGGTTTACACAGTTCAC 57 NA DesignNoJunction Mus musculus 50 Eme1 ENSMUSG00000039055 ENSMUST00000039949 3 1 1 105 11 94509368 94509466 CTTAAAGCAGGCAAGTCCT 59 94509281 94509299 AATCACCAGTGACAATGCT 59 NA Mus musculus 50 Myo16 ENSMUSG00000039057 ENSMUST00000042103,ENSMUST00000110958 1 2 2 82 8 10554673 10560133 CTTGCCAGAAAGTTATAAGAGG 58 10560176 10560194 GGATGTAACCTCTTGTTGC 58 NA Mus musculus 50 Rcan2 ENSMUSG00000039601 ENSMUST00000044895,ENSMUST00000113586,ENSMUST00000044792 1 3 3 189 17 44158060 44173926 CAAACTAGGACCAGGAGAG 58 44174079 44174097 TTATCATGGACGTGCTCAG 59 NA InUTR Mus musculus 50 Alg14 ENSMUSG00000039887 ENSMUST00000039442 2 1 1 81 3 121023114 121064477 AATAAAGCCAGATTTGGTGC 59 121064521 121064539 AAGTATCCCAAGAAGCAGG 58 NA Mus musculus 50 Tax1bp3 ENSMUSG00000040158 ENSMUST00000040687 3 1 2 271 11 72990721 72990739 CTTTGTTAACCAGGGAGGG 59 72994242 72994260 CCTCTGATACTCGTGTGAC 59 NA DesignNoJunction, InUTR Mus musculus 50 1700034J05Rik ENSMUSG00000040163 ENSMUST00000111622 2 1 2 93 6 146901474 146901492 CTTGTCCAAGCAAAGATCC 58 146901011 146901419 TCTTATCTCCACAACTTCGTC 59 NA Mus musculus 50 Mybbp1a ENSMUSG00000040463 ENSMUST00000045633 2 1 2 95 11 72262593 72262611 TCAGCATCACTGGAATCTC 59 72262667 72262774 CTTACAGATCACTGGGTATCTG 59 NA Mus musculus 50 Ttc3 ENSMUSG00000040785 ENSMUST00000113875,ENSMUST00000036349,ENSMUST00000064568,ENSMUST00000064541 3 4 4 88 16 94606531 94606950 GTAGAAGCCATCCGTTCTC 59 94607001 94607020 TTTGCCAAATCCACAATGTC 59 NA Mus musculus 50 Osbpl10 ENSMUSG00000040875 ENSMUST00000046627 2 1 1 133 9 115018592 115018610 CCAGAGACATCTCAGTACG 58 115018707 115076215 CCACCTGGTTCATCATCTC 59 NA Mus musculus 50 Ssr2 ENSMUSG00000041355 ENSMUST00000035785 2 1 1 167 3 88387794 88390791 ATGGACCTGTTGTGATTGG 59 88391860 88391878 TCTTGCTGGAATACCACAG 59 NA Mus musculus 50 Kcnj2 ENSMUSG00000041695 ENSMUST00000042970 1 1 1 60 11 110933304 110933323 GGCAGACATCTTTACTACCT 58 110933345 110933364 ACAGAAGATAACCAGCATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mapk1ip1 ENSMUSG00000041775 ENSMUST00000075667 2 1 1 60 7 146028144 146028162 GATCCATGTCTTCTGGACC 59 146028102 146028120 TATGGCACATTAGGATGCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ndufa7 ENSMUSG00000041881 ENSMUST00000048249 1 1 1 89 17 33966708 33966727 CTCAATCATCATGTCCTCAC 58 33975061 33975079 GTCACTGCCTTCTTCTCAG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Ppig ENSMUSG00000042133 ENSMUST00000090858,ENSMUST00000116494,ENSMUST00000040915 1 3 3 81 2 69571276 69572354 GAGGATTCTTTGAAGATGAGAG 58 69572396 69572414 GTATCCTTCCCTCTGTTGG 59 NA Mus musculus 50 Ubap2l ENSMUSG00000042520 ENSMUST00000080538,ENSMUST00000029553,ENSMUST00000064639,ENSMUST00000090908,ENSMUST00000116319 1 5 5 80 3 89830563 89830581 TTACCGCCTCTAATGTGTC 59 89829143 89830519 CAGCAAGGTCAATTCTCTG 58 NA Mus musculus 50 Tmem186 ENSMUSG00000043140 ENSMUST00000052505 3 1 1 63 16 8636000 8636018 CGTGTCAGACATGATACCC 59 8635955 8635973 GATGCGTACAAACACATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lysmd4 ENSMUSG00000043831 ENSMUST00000058771 3 1 1 164 7 74368624 74368642 GGAAGAGTCACATCAGGTG 59 74368770 74370760 ATATCTGCAACTTTGCAGC 58 NA Mus musculus 50 Clrn1 ENSMUSG00000043850 ENSMUST00000055636,ENSMUST00000051408,ENSMUST00000072551 2 3 3 60 3 58688893 58688911 TTTCTCTGTGCTCTTGGAG 59 58688851 58688869 TAGTGGCTTTAACCCACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr983 ENSMUSG00000044205 ENSMUST00000050996 2 1 1 60 9 39899947 39899965 CTCCATCAATGAACTGGTG 58 39899905 39899928 GAGACTGGGAACTATTATACTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1110002B05Rik ENSMUSG00000044408 ENSMUST00000056228 2 1 1 75 12 55757405 55757423 CTACTACCAGTACCTGCTG 58 55747512 55757366 CAGCATCGAATTGAACACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Asah3 ENSMUSG00000045019 ENSMUST00000056113 2 1 1 80 17 57097789 57097807 CACAGTCAATGCATATGCT 58 57095048 57097748 TCCCTAATCTTCTTGTACTCTG 58 NA Mus musculus 50 Edg8 ENSMUSG00000045087 ENSMUST00000062813 1 1 1 84 9 21048740 21048758 TATTACTGGATGTCGCGTG 59 21048674 21048692 GAGTTAGCCATGGCTAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bola3 ENSMUSG00000045160 ENSMUST00000055875 1 1 1 195 6 83301285 83301303 GAATGTTTGCCTCTCAGAC 58 83303114 83308148 TTTAGTGCCTGATTGACCA 58 NA DesignNoJunction Mus musculus 50 Trrap ENSMUSG00000045482 ENSMUST00000060830,ENSMUST00000100467,ENSMUST00000094120,ENSMUST00000038980 3 4 4 100 5 145532519 145537982 ACTTTGAGAATGTCACGTC 57 145538046 145538064 AAGAAACTGGACTTCTCCA 58 NA Mus musculus 50 Plekha7 ENSMUSG00000045659 ENSMUST00000106605,ENSMUST00000084664 3 2 2 82 7 123324002 123324695 GACCCAAGATTGTCAAGTC 58 123323938 123323956 CGGAACATTAAGGTTCCTC 57 NA Mus musculus 50 Olfr803 ENSMUSG00000046041 ENSMUST00000056736 2 1 1 60 10 129128511 129128529 TACTTGGCTCCTAGAAGTG 57 129128469 129128490 CAATGTGAACAGTAGAGTAACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 0610025J13Rik ENSMUSG00000046683 ENSMUST00000062256 1 1 1 258 4 97988195 97989014 AATGGCCAAGATTTGAGAG 57 97989236 97989254 GAAATGCTGTTGCTAGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 D030056L22Rik ENSMUSG00000047044 ENSMUST00000062753,ENSMUST00000055792 2 2 2 82 19 18791744 18791762 GTATTGGAGGAACCCTCTG 59 18791808 18791826 CCTCAAGTGTCTCTGTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Adamts12 ENSMUSG00000047497 ENSMUST00000110511 2 1 2 119 15 11001511 11001529 GTTAAGATGGTGGCTTCCT 59 11001612 11002576 CAACAATGTCAGTCCTTGG 58 NA Mus musculus 50 Zfp518 ENSMUSG00000049164 ENSMUST00000050092 3 1 1 60 19 40986890 40986908 CACTCTGGTACTCTTCCCT 59 40986932 40986950 GGTCTTTATGAATGGCACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gpatch8 ENSMUSG00000050324 ENSMUST00000058467 1 1 1 60 11 102338025 102338044 CCAGAGGATACTAGAGTTGG 58 102337984 102338002 ACCTATAAACGTGCTCACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A130092J06Rik ENSMUSG00000050592 ENSMUST00000056406 1 1 1 60 2 31938341 31938359 GTATTCAGAGCATCGGAGG 59 31938299 31938318 ACATCAATCACGGTAATCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc121 ENSMUSG00000050625 ENSMUST00000058825 1 1 1 67 1 183440664 183440682 CTAGAAGCCTTGACCAGAG 59 183440615 183440633 TTATGACCACGATGATGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zbtb26 ENSMUSG00000050714 ENSMUST00000067043,ENSMUST00000102789 2 2 2 60 2 37292007 37292027 GGACTTACCTTGTATTCATCC 57 37291967 37291986 CTGAATATCACTGTCCTCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 AY358078 ENSMUSG00000050961 ENSMUST00000053821 3 1 1 82 14 52440033 52441812 CTTACACCTGCAAGTTGTG 58 52441855 52441876 CTATGTCTGAAATATTCGGCAG 59 NA Mus musculus 50 Sepn1 ENSMUSG00000050989 ENSMUST00000060435,ENSMUST00000084231 2 2 2 63 4 134098346 134098635 TCAAGAAGGTCAACTACCTG 58 134098302 134098320 AGTTTCTTCTCAGCTCTGG 58 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 1700109F18Rik ENSMUSG00000052371 ENSMUST00000064205 2 1 1 60 2 74550489 74550509 CAAGGGACATACTTTAGGGAC 59 74550449 74550467 CGCGTTATTCAAGAACCTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Clec12a ENSMUSG00000053063 ENSMUST00000065289 3 1 1 88 6 129303780 129303798 AATCAAGAACCTTTCTGCC 57 129303849 129304509 GTTTACATTTGTGCTCTGGT 58 NA Mus musculus 50 EG623015 ENSMUSG00000053277 ENSMUST00000089788 3 1 1 61 2 181729928 181730330 ATTCTTCGATGCCAATGGT 59 181730354 181730373 CCTATCATGGTCACATAGGT 58 NA DesignNoJunction Mus musculus 50 9530002K18Rik ENSMUSG00000053729 ENSMUST00000066328 1 1 1 81 18 44327804 44328776 TTAAAGAGCCAAATTGCACC 59 44327742 44327761 CTATCATCTGCACAAACTGG 58 NA Mus musculus 50 Olfr744 ENSMUSG00000053815 ENSMUST00000066457 3 1 1 61 14 51238513 51238531 CTTAAGTCCTCTGCCTCTC 58 51238555 51238574 GGACCAGAGTATAAGATCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rdhs ENSMUSG00000054052 ENSMUST00000077530 3 1 1 149 10 127296698 127297180 AAGTACCTGGCATTCTATCTG 59 127297291 127297309 GAAGAGCTTAGCATCCCAG 59 NA Nonspecific Mus musculus 50 Ugt1a1 ENSMUSG00000054545 ENSMUST00000113142,ENSMUST00000073772,ENSMUST00000058237,ENSMUST00000113138,ENSMUST00000113135,ENSMUST00000113137,ENSMUST00000113134,ENSMUST00000014263,ENSMUST00000097659,ENSMUST00000049289,ENSMUST00000073049 3 11 11 80 1 90112869 90112888 ATGTCCTTGAAATGACTGCT 59 90112930 90114718 TGATGTTCTCCTTGTAGCTC 59 NA Nonspecific Mus musculus 50 AI662250 ENSMUSG00000054723 ENSMUST00000067931 1 1 1 97 17 56855219 56855237 GATATCTGCCCTCCAAGAG 58 56855140 56855158 GTAGCTGCTGGATCATCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930578G10Rik ENSMUSG00000054885 ENSMUST00000068158,ENSMUST00000107984 3 2 2 82 4 42825434 42858770 ATGTGGTGGCATCTTAAGG 59 42858815 42858834 CTGGAAACAGTTGTCAAAGC 59 NA Mus musculus 50 5330416C01Rik ENSMUSG00000054944 ENSMUST00000068247 3 1 1 60 13 98514822 98514842 TCCCATTAAGAGGACAATCTG 59 98514782 98514802 CAGGTGGAGAATATGAATCGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 A830031A19Rik ENSMUSG00000055010 ENSMUST00000068360 2 1 1 225 11 23949546 23958782 CTCTTCATCCTAGCAGGAC 58 23949339 23949358 TATCAACATTCTCGTGGTCC 59 NA DesignRelaxed Mus musculus 50 3300001A09Rik ENSMUSG00000055125 ENSMUST00000068526 2 1 1 103 9 67607429 67607447 TCAAAGAAGGGATCCACTG 58 67607514 67607532 ATCCTTCTAGCTTATGCCC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 C1r ENSMUSG00000055172 ENSMUST00000068593,ENSMUST00000074590 3 2 2 215 6 124467824 124469379 CTCATGGAGGGAAATCAGG 59 124469846 124469866 GGTCAGCATCTTGTAATATGG 58 NA DesignRelaxed Mus musculus 50 Atp10b ENSMUSG00000055415 ENSMUST00000077659 1 1 2 80 11 43062483 43067686 GAAGACATGGACTGTCCTC 59 43067728 43067748 GCGTTGTATATTAGGGAAACC 58 NA Mus musculus 50 ENSMUSG00000055704 ENSMUSG00000055704 ENSMUST00000069431 1 1 1 68 10 77949522 77949540 AAAGAAGTCTGCCTATGCC 59 77949472 77949490 ACATATTGAACTCCAGCGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr378 ENSMUSG00000055971 ENSMUST00000069790 2 1 1 60 11 73238850 73238871 CCTATAGTTGTACTCCCTTTCC 59 73238811 73238829 TGGAGGAAACAATTCTTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 AI504432 ENSMUSG00000056145 ENSMUST00000070085 1 1 1 104 3 106842483 106851776 AATCAGGTCCCTTAAGAGC 58 106851844 106851862 TATGTAACTGCCACTGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 AI987944 ENSMUSG00000056383 ENSMUST00000071804,ENSMUST00000108007 1 2 2 89 7 48632120 48632138 CTACAAGAACCTCACTGCT 58 48630736 48631870 CTTTCATGCCTTCCATGTC 58 NA Mus musculus 50 Med12l ENSMUSG00000056476 ENSMUST00000040325,ENSMUST00000029393 2 2 2 60 3 58881077 58886879 AAAGATAACCAAGAGGTTGC 58 58886899 58886920 CCCATTCACATAACAATGTCAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Tmem154 ENSMUSG00000056498 ENSMUST00000107682,ENSMUST00000070636 2 2 2 102 3 84488293 84488311 TATTAATGGTGGCGATCCC 59 84488376 84488483 CTAGAAGGCTCTTGCTTAGG 59 NA Mus musculus 50 Olfr90 ENSMUSG00000056600 ENSMUST00000070808 3 1 1 60 17 37222254 37222272 AACTCCTTCTCTTAACCCT 57 37222212 37222230 GAATGCCCTCTTTACTTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000003456 ENSMUSG00000056687 ENSMUST00000070956 2 1 1 199 11 109224547 109224565 ATCACGTTGCTGTAGATGG 59 109218254 109218272 ATAAGCTGAGGTTTCAGCT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Setd3 ENSMUSG00000056770 ENSMUST00000071095,ENSMUST00000099383 2 2 4 295 12 109396052 109396070 AAGAAGAGGAAGTACGCTG 59 109351589 109356455 ATAGCCAGTTGTGATCAGG 59 NA DesignRelaxed Mus musculus 50 Acbd4 ENSMUSG00000056938 ENSMUST00000107040,ENSMUST00000074474 1 2 6 80 11 102964949 102965415 CCTAAGAATGGGATGCCTG 59 102965459 102965477 CACCAGCTTCATCTCAGAG 59 NA Mus musculus 50 2010309E21Rik ENSMUSG00000057497 ENSMUST00000071492 2 1 1 114 6 86318889 86318907 GTCTCTGTCATCCATAGGG 58 86318985 86319003 CTCATTCGTAAACGTTGCT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Capn11 ENSMUSG00000058626 ENSMUST00000076593 2 1 1 80 17 45776829 45779429 CTGTTCCATTGAAGTCACAG 58 45776768 45776786 ACTGCATAAGCATGTCCTC 59 NA Mus musculus 50 4933426I21Rik ENSMUSG00000058661 ENSMUST00000077702 3 1 1 189 7 28554292 28554310 ATTGTCAGGACATGGTCTG 59 28555674 28555693 CAGTGTAGAGGAAACATCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1300010F03Rik ENSMUSG00000058997 ENSMUST00000046069,ENSMUST00000012714 3 2 2 80 14 79333567 79333585 CTGGGAATCCATTAGACCC 59 79333629 79334410 TTAGTTGGTCCTGAAAGGG 58 NA Mus musculus 50 Sohlh1 ENSMUSG00000059625 ENSMUST00000076989 3 1 1 115 2 25701768 25701786 GTCTGTGTACTTCCTCCAG 59 25701240 25701258 TTACCTGCAGAACATCACC 59 NA DesignNoJunction Mus musculus 50 1700019M22Rik ENSMUSG00000059695 ENSMUST00000073560 1 1 1 65 12 97285272 97285290 ATGTTGAGCCATCAACCTC 59 97285225 97285243 AACAGGATTTACGATGGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr767 ENSMUSG00000059762 ENSMUST00000082131 3 1 1 60 10 128516786 128516804 ACGAACATCTTCATTCCCA 58 128516744 128516764 AGCTAATACTCTTGTTTCCCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 V1re3 ENSMUSG00000060245 ENSMUST00000072410 1 1 1 60 17 20913340 20913358 TGCTCTTTCACATGATCCC 59 20913298 20913317 ACACAAAGCTATGATTGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1512 ENSMUSG00000060640 ENSMUST00000071221 3 1 1 61 14 52991870 52991888 TCACACCTTTCCTCAATCC 59 52991827 52991845 CAAGGCTAACTTCACCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr503 ENSMUSG00000060759 ENSMUST00000078162 3 1 1 62 7 115688408 115688426 CTCTGGACCACTATGTAGC 58 115688451 115688470 TAGGATTGGTGAGAATGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ttr ENSMUSG00000061808 ENSMUST00000075312 1 1 1 156 18 20824981 20824999 CTGATGGTCAAAGTCCTGG 59 20828511 20828529 ACTTCTCATCTGTGGTGAG 58 NA DesignNoJunction Mus musculus 50 Ncr1 ENSMUSG00000062524 ENSMUST00000006792 2 1 1 81 7 4289898 4289918 CTACACCTGCTTCTATCAGAG 59 4289958 4292372 GTCATACAGACCAGTTACTACC 59 NA Mus musculus 50 Tas2r109 ENSMUSG00000062528 ENSMUST00000067539 2 1 1 61 6 132930709 132930730 CTAGACTGATGATACAGTTCAC 57 132930669 132930689 CCAGACACTAATATGGTTAGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr84 ENSMUSG00000063234 ENSMUST00000079824 2 1 1 63 15 103139781 103139800 AGAATATTTGGACTCCTCCT 57 103139737 103139755 CAATGAGACAGAGGGTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Crb1 ENSMUSG00000063681 ENSMUST00000059825,ENSMUST00000027616,ENSMUST00000112009 1 3 3 60 1 141145633 141152128 GGAATTCACTGTGAAGAAGAC 58 141145593 141145611 TACCACCATTTAGGCAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr963 ENSMUSG00000064110 ENSMUST00000073433 3 1 1 60 9 39477187 39477205 GTGTTACCTCTAGCCTGTG 59 39477227 39477247 CAACATTTGTAAAGCCTACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-let-7a-1 ENSMUSG00000065421 ENSMUST00000083487 1 1 1 60 13 48633617 48633635 GTGGGATGAGGTAGTAGGT 59 48633575 48633594 ATAGTTATCTCCCAGTGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-429 ENSMUSG00000065427 ENSMUST00000083493 1 1 1 63 4 155428072 155428091 TGATGGATGTCTTACCAGAC 58 155428028 155428049 GCATTACCAGACAGTATTAGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 C330021F23Rik ENSMUSG00000065952 ENSMUST00000084028 1 1 1 204 8 3584155 3584173 GTTTGTCATGCCACTTCTG 59 3584341 3584359 ATTCAGCTCTCAGCTACCT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Muc5b ENSMUSG00000066108 ENSMUST00000084424 2 1 1 80 7 149030741 149031223 CTGATCTCTGCAATTGGAC 58 149031267 149031285 GGTTAGAGCAGGTATCCAC 59 NA Mus musculus 50 Hmcn1 ENSMUSG00000066842 ENSMUST00000074783 1 1 2 80 1 152526715 152527750 TCAGTATTAGTTCCTCCTCAC 58 152526655 152526675 CAAGGTAACACTCTGTTTCTC 58 NA Mus musculus 50 Olfr834 ENSMUSG00000066910 ENSMUST00000086492 2 1 1 60 9 18793204 18793223 TGTTTATTTGAGCTCTGCTG 58 18793246 18793264 CATCACAGAGGCTATAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Asb18 ENSMUSG00000067081 ENSMUST00000086882,ENSMUST00000097656,ENSMUST00000113098 2 3 3 60 1 91911085 91911104 GTGAGGAGATTAAAGTCTGC 57 91911044 91911063 AGATCAGCTTCTGTACAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2010002M12Rik ENSMUSG00000067297 ENSMUST00000087357 3 1 2 143 19 34694662 34704227 GCAACATGAGTGAAGAATCTC 59 34694539 34694557 GATCACGGAACTCAGTCTC 59 NA Mus musculus 50 Dcpp2 ENSMUSG00000067843 ENSMUST00000088598,ENSMUST00000088594 2 2 2 131 17 24036366 24037366 TGATTGTTGGAATTCAGCTC 58 24037459 24037478 GATTATATGTGCCTTCGACC 58 NA Mus musculus 50 Cyp2d40 ENSMUSG00000068083 ENSMUST00000055721 1 1 1 98 15 82590755 82591198 GCTTCCTTATCCCTAAGGG 58 82590675 82590693 GTTCAGGATAGAAGCGGAG 59 NA DesignNoJunction Mus musculus 50 Col8a1 ENSMUSG00000068196 ENSMUST00000089332 1 1 1 104 16 57628921 57632432 AAGGCAAAGGAGAAGTACC 59 57628835 57628853 CATGACCTGGTAAACCTGG 59 NA Mus musculus 50 Rbmy1a1 ENSMUSG00000069031 ENSMUST00000092052 2 1 1 60 Y 2127144 2127163 GACTATGGCAATTACCACTC 58 2127186 2128469 CAGCATGATCACTGAAGAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Hist4h4 ENSMUSG00000069266 ENSMUST00000091702,ENSMUST00000102965 2 2 2 67 13 23849196 23849214 GGTTAAGGGACTAAAGCGA 58 23849245 23849263 GAATTCAGTGAGTGGTCCT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Pex11c ENSMUSG00000069633 ENSMUST00000111081,ENSMUST00000004686 1 2 2 98 8 3460306 3460325 GACAATGCTGAAGCTTAGAC 58 3459390 3459408 CATATCCTTGCCTCCATGG 59 NA DesignNoJunction Mus musculus 50 Ahnak ENSMUSG00000069833 ENSMUST00000092955,ENSMUST00000079602,ENSMUST00000043246 3 3 5 81 19 9075340 9111653 CTGAAGTGGTTCTGAACAC 58 9111698 9111716 GCTTTGTTGATAGCTTCCT 57 NA Mus musculus 50 Q8BQR4-2 ENSMUSG00000070035 ENSMUST00000071888 3 1 1 90 7 79818813 79818933 GTATAAGCCCGATGATGAC 57 79818987 79819005 TTCAAGAGTTAGCGAAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hsf5 ENSMUSG00000070345 ENSMUST00000093956 2 1 1 80 11 87449570 87449588 ATCATAACCCATCTCCGTC 58 87449631 87451587 TTATACTGCTATCCACCTGC 58 NA Mus musculus 50 Wfdc16 ENSMUSG00000070530 ENSMUST00000094345,ENSMUST00000109336 1 2 2 172 2 164461478 164461496 TTTAACAAGGCCCAAACTG 58 164460945 164460963 TTGTATGGTTTGGCTTTGC 59 NA DesignNoJunction Mus musculus 50 Speer4d ENSMUSG00000070933 ENSMUST00000095006 3 1 1 129 5 15128433 15129197 GAATATCAGGTCTCAGAAACTG 58 15129287 15129305 AGGATGATTGTAGGTGCTG 59 NA Mus musculus 50 Ndufb6 ENSMUSG00000071014 ENSMUST00000108108 3 1 2 64 4 40219879 40226201 GGAAGAACATGACTAAACCA 57 40217872 40219855 TGTATCACCTGGAAATATCCTG 59 NA DesignRelaxed Mus musculus 50 Zkscan17 ENSMUSG00000072892 ENSMUST00000101149 3 1 1 61 11 59338902 59338920 AGTGGAAGTAGCCTAGGAG 59 59338859 59338877 CTTGGCAGTTCTATTCGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr716 ENSMUSG00000073896 ENSMUST00000098137 3 1 1 60 7 114291399 114291417 GCAGATACTTACAGCACAG 57 114291441 114291459 GTGCTAGGAGGATTACCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A430078G23Rik ENSMUSG00000074497 ENSMUST00000098966,ENSMUST00000098965 2 2 2 80 8 3381972 3384906 TCAAGCAAGGAATGTAGCA 59 3384949 3384968 TTCCATACAGCTGATCTCAC 59 NA Mus musculus 50 Olfr1305 ENSMUSG00000074955 ENSMUST00000099608 3 1 1 60 2 111713345 111713366 CATCTCCTATGTCTTTCTTCTC 57 111713306 111713324 CTTGGATGAACATCCTGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075047 ENSMUSG00000075047 ENSMUST00000099728 2 1 1 65 16 45129320 45129338 TGGTCAATGGTCAATGGTC 59 45129367 45129385 CCTTACCAGGGAAGTTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1138 ENSMUSG00000075149 ENSMUST00000099848 3 1 1 60 2 87578067 87578086 TATGCAGTAGACATGTCCAG 58 87578026 87578045 CCACAGAATAAACACCAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr353 ENSMUSG00000075382 ENSMUST00000100149 2 1 1 60 2 36745769 36745787 GAGTTAGTGCTTTCTGGCT 59 36745727 36745745 TGACAATGCTTACAAAGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Fnbp1 ENSMUSG00000075415 ENSMUST00000113564,ENSMUST00000113562,ENSMUST00000113561,ENSMUST00000073879,ENSMUST00000113560,ENSMUST00000100208,ENSMUST00000075326,ENSMUST00000100207,ENSMUST00000113555,ENSMUST00000102847,ENSMUST00000113552,ENSMUST00000113551 2 12 12 60 2 30951687 30952624 GAGGAGTACAAGTACACGG 59 30951645 30951665 AGTCATTCATCTCATTCAGGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000075480 ENSMUSG00000075480 ENSMUST00000100326 2 1 1 88 11 106022181 106022199 CCTATCTGAAAGGACCCAC 59 106022251 106022269 CTCTAAACAACTCCAGCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075568 ENSMUSG00000075568 ENSMUST00000100481 1 1 1 66 14 64607809 64607827 ACATGTCTGGATTCAGCTG 59 64607857 64607875 CACTGAGGGTTGAGTAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV1-135 ENSMUSG00000076502 ENSMUST00000103303 1 1 1 76 6 67560225 67560243 CTCACTTTGTCGGTTACCA 59 67560282 67560301 CCATCACTATCTAAGAGGCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV13-84 ENSMUSG00000076538 ENSMUST00000103339 2 1 1 106 6 68889638 68889775 ATCCCAGGCATGATATGTG 59 68889845 68889863 TATATGTCCTCACTTGCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGHM ENSMUSG00000076617 ENSMUST00000103425,ENSMUST00000103426 3 2 2 60 12 114660193 114660211 CTTCTTGAAGAACGTGTCC 58 114659872 114659891 GAAGGTTAGGATGTCTGTGG 59 NA DesignNoJunction Mus musculus 50 IGHV14-4 ENSMUSG00000076666 ENSMUST00000103475 1 1 1 60 12 115414758 115414779 ATGGTGATACTGAATATGCCTC 59 115414719 115414739 GATGTGTCTGCTGTTATAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S45 ENSMUSG00000076696 ENSMUST00000103505 3 1 1 76 12 115947036 115947054 TATGAACTGGGTGAAGCAG 59 115946978 115946996 TAGTACCACCGTTGTAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-36 ENSMUSG00000076704 ENSMUST00000103513 1 1 1 60 12 116118172 116118190 CCACATTGACTGTAGACAC 57 116118130 116118148 GAAGTCAGGCTGTTTAGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000070585 ENSMUSG00000078160 ENSMUST00000104964 2 1 1 238 4 146915228 146915246 ATTTGTTAGGAAAGGCAGG 57 146915448 146915466 TGTAGACAACAGCACTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2A4U0_MOUSE ENSMUSG00000078261 ENSMUST00000105058 3 1 1 234 11 99654194 99654212 CCTGCTGTGATAGTTCCAG 59 99653978 99653996 AGTGAAAGTACTCAGCAGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 A2BEJ1_MOUSE ENSMUSG00000078660 ENSMUST00000107310 1 1 2 80 4 73565039 73565058 CGACTTATGAATGGATCCTG 57 73564700 73564996 CATCAAACCAAAGACCTGG 58 NA Nonspecific Mus musculus 50 Ccl19 ENSMUSG00000078738 ENSMUST00000108010 1 1 1 182 4 42248678 42248696 TCAGATTATCTGCCATGGC 59 42250161 42250267 CTGTTGCCTTTGTTCTTGG 59 NA Nonspecific, InUTR Mus musculus 50 NP_001093654.1 ENSMUSG00000078787 ENSMUST00000108385 3 1 1 106 7 27942402 27942498 CAAATGGATAAGGAACAGCAG 59 27942566 27942584 GTAGTGCTTGTGGTTTCAG 58 NA Mus musculus 50 EG667283 ENSMUSG00000078791 ENSMUST00000108445 1 1 1 80 7 21356731 21358525 TGAGGCTCAGAAGATTTCC 58 21358569 21358587 AGGAGGAGAAGTACCATGG 59 NA Nonspecific Mus musculus 50 A2ARW4_MOUSE ENSMUSG00000078865 ENSMUST00000108945,ENSMUST00000108943 1 2 2 105 2 177356468 177356486 CTTCACTCAGGAAGAGTGG 59 177356189 177356402 CCAAATGTAACCTATAGCTGTG 58 NA Nonspecific Mus musculus 50 Q8R020_MOUSE ENSMUSG00000079163 ENSMUST00000110990 2 1 1 113 5 138126638 138126656 AACCAGTTCTGTGATCCAC 59 138126543 138126564 CTTCTGATTTCCATGAGTACAC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 St6galnac4 ENSMUSG00000079442 ENSMUST00000113293,ENSMUST00000102818,ENSMUST00000113292 2 3 3 110 2 32449915 32451224 AAGAACCGGAGACAATCAG 59 32451297 32451316 GTAACTATCGCTGACCATCC 59 NA Mus musculus 50 NP_001075033.1 ENSMUSG00000079699 ENSMUST00000115564,ENSMUST00000115563 1 2 2 84 X 8422070 8422088 CAACCAGTCTTCATGAGTG 58 8422136 8422629 AGCATTCATCTTCACTGTC 57 NA Mus musculus 50 3110001I22Rik ENSMUSG00000079737 ENSMUST00000035426 1 1 1 60 16 13677260 13677279 AACAAGAGGTGATCTTTCTG 57 13677301 13677320 AAAGTCATCTTTCTCATCCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001098654.1 ENSMUSG00000080147 ENSMUST00000116293 2 1 1 177 7 92768229 92768248 TTTGCATGGTTATTCAGGAC 58 92768385 92769098 TAGAGAACATCTTCCAAGAGTC 58 NA Mus musculus 50 Kcnb2 ENSMUSG00000080302 ENSMUST00000116647 1 1 1 71 1 15700904 15700962 ACAGTAAGCAGAGATAAGGG 58 15700996 15701014 CACGGTTATGTCAATTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Serpinf1 ENSMUSG00000000753 ENSMUST00000000769 1 1 2 80 11 75229125 75229143 CTCCTTGCCTCTGTTACTG 59 75228613 75229083 TTTGACTCGAAGTTTCCTCTC 59 NA Mus musculus 50 Ocrl ENSMUSG00000001173 ENSMUST00000001202,ENSMUST00000115015 2 2 4 136 X 45309407 45313645 AAAGGAGAAATCCCTTCTGC 59 45313744 45314569 TTTGGAACAAGTCCTCCTG 59 NA Mus musculus 50 Kcnh6 ENSMUSG00000001901 ENSMUST00000051640 1 1 3 147 11 105888914 105888932 CTACTTCAGCATCCACAGG 59 105889042 105893979 GTAGGAATACCTGTGCAGAG 59 NA Mus musculus 50 Braf ENSMUSG00000002413 ENSMUST00000002487,ENSMUST00000101497 2 2 2 80 6 39615102 39616260 ACAGAATTCAGGATGGAGAG 58 39615041 39615060 CAACATGTAACTCCTCTCCA 59 NA Mus musculus 50 Tchp ENSMUSG00000002486 ENSMUST00000094441,ENSMUST00000065043 2 2 2 180 5 115159355 115159373 GAGGAAGATTCTGGAGCTC 59 115159517 115161270 TTCAGCAATCAGCTTCCTC 59 NA Mus musculus 50 Ikzf4 ENSMUSG00000002578 ENSMUST00000105233,ENSMUST00000002653,ENSMUST00000105232,ENSMUST00000065334 2 4 4 111 10 128073774 128073792 ACAAACAGCAAAGTACCCT 59 128072962 128073699 TCACGGATTTCATCACCTG 59 NA Mus musculus 50 Cacna1b ENSMUSG00000004113 ENSMUST00000114442 1 1 7 129 2 24487514 24487532 TGTTGCTGTAATCATGGAC 57 24482424 24487421 ATAATGAATCCGGCAACAC 58 NA Mus musculus 50 Clcn5 ENSMUSG00000004317 ENSMUST00000115748,ENSMUST00000115746 1 2 3 90 X 6790052 6790070 AAGACTTGATGGACATCCC 58 6763452 6790001 GACTTGTTCCCTTCTATTTCTC 58 NA Mus musculus 50 Abca13 ENSMUSG00000004668 ENSMUST00000042740 3 1 2 80 11 9466324 9467679 AAGACAGGATCCTGGAGAG 59 9467722 9467741 TCGATGCTGATAAGATGGAG 59 NA Mus musculus 50 Prkacb ENSMUSG00000005034 ENSMUST00000102515,ENSMUST00000005164,ENSMUST00000106140,ENSMUST00000106138,ENSMUST00000106137 3 5 5 81 3 146418650 146418668 TGGAAGAGTCATGTTGGTG 59 146414501 146418607 CTTAACAACCTTCTGCTTGTC 59 NA Mus musculus 50 Rfx5 ENSMUSG00000005774 ENSMUST00000107260,ENSMUST00000107254,ENSMUST00000107253,ENSMUST00000107255,ENSMUST00000090837,ENSMUST00000029772 1 6 6 82 3 94760521 94760656 CAGTCCAAATATTGCTACAGTG 59 94760699 94760717 GATCCCTTCAAGTCGAGTC 59 NA Mus musculus 50 Rundc3a ENSMUSG00000006575 ENSMUST00000107102,ENSMUST00000107105,ENSMUST00000006750 3 3 4 85 11 102258924 102258942 ACCCATTGATGACTCTTCC 58 102258991 102259407 GGGCACAAGCTTTAAATCG 59 NA Mus musculus 50 Runx1t1 ENSMUSG00000006586 ENSMUST00000006761 2 1 3 151 4 13670875 13762796 GTATCGTACCGAGAAGCAC 59 13762911 13764918 TGCCATTCGTTAATGTCGT 59 NA Mus musculus 50 Msh5 ENSMUSG00000007035 ENSMUST00000007250 1 1 2 92 17 35180999 35181017 AGACTATGATGTTGGCGTC 59 35179117 35180684 TGTAGAACGCTGTAAGTGTC 59 NA Mus musculus 50 Tle1 ENSMUSG00000008305 ENSMUST00000107349 1 1 10 110 4 71806443 71858814 ACAAACAGAGTAATTCCCTC 57 71806352 71806370 CCTTATCATCCACCTTCCT 58 NA Mus musculus 50 Man1a2 ENSMUSG00000008763 ENSMUST00000008907,ENSMUST00000090730 2 2 2 82 3 100395810 100395828 CTTACTGAAAGCATGGCTG 58 100391851 100395765 TTTCTATAGCCTCAACAGCA 58 NA Mus musculus 50 Ubp1 ENSMUSG00000009741 ENSMUST00000084885 1 1 2 101 9 113868047 113868501 TTCTCACAGAGATGAGGCT 59 113868566 113868584 GAGAATCACCGTAGTCTGC 59 NA Mus musculus 50 Tusc2 ENSMUSG00000010054 ENSMUST00000010198 1 1 1 163 9 107467002 107467023 GGGTACATAAGAATCTGATTCC 58 107467297 107467315 AAGCTACACCTTGATCCTG 58 NA DesignNoJunction, InUTR Mus musculus 50 Zfp179 ENSMUSG00000010086 ENSMUST00000054927,ENSMUST00000102661,ENSMUST00000058348 1 3 4 90 11 61264823 61264841 CGATCTGGGCTATCTAGAG 58 61264390 61264483 TAAGAGATCCAGATGCTGG 58 NA Mus musculus 50 Myt1 ENSMUSG00000010505 ENSMUST00000081125,ENSMUST00000108756 2 2 3 84 2 181536540 181536558 GTACTGAAGTGCCCTACTC 59 181536603 181537634 GACATCCAGATAAACTTCTGTG 58 NA Mus musculus 50 Pabpc4 ENSMUSG00000011257 ENSMUST00000106243,ENSMUST00000106241,ENSMUST00000080178,ENSMUST00000078734,ENSMUST00000094192 3 5 6 80 4 122967570 122968120 TCAGCCAGTTTGGTAAGAC 59 122968164 122968182 AACTTACAAAGCCAAAGCC 58 NA Nonspecific Mus musculus 50 Wnt8a ENSMUSG00000012282 ENSMUST00000012426 3 1 1 81 18 34702186 34702204 AACTTCCTGATAACCCGTC 58 34702537 34702555 ACTCTTCGATGCCAATCTG 59 NA DesignNoJunction Mus musculus 50 D16H22S680E ENSMUSG00000013539 ENSMUST00000115628,ENSMUST00000013683 3 2 2 100 16 18311066 18312739 TGGTAGAGGTGAACTTGTG 58 18310984 18311003 TAAAGCCGTTATACAGGTGG 59 NA Mus musculus 50 Dedd ENSMUSG00000013973 ENSMUST00000111300,ENSMUST00000111299,ENSMUST00000064950,ENSMUST00000097467 1 4 4 80 1 173270462 173270969 AGACATGTGATATCAGGCTC 58 173271011 173271030 TATTGGAGAAGACATTGCCT 58 NA Mus musculus 50 BC039210 ENSMUSG00000014444 ENSMUST00000064316 1 1 3 95 8 125019702 125019720 AACCAGTCTTTGCTGTACC 59 125019509 125019644 CAGGTGGTTCTGGATATAGC 59 NA Mus musculus 50 Hmgb3 ENSMUSG00000015217 ENSMUST00000072699,ENSMUST00000015361,ENSMUST00000088874,ENSMUST00000114582 3 4 4 97 X 68812439 68812853 TATGAGAAGGATGTTGCTGAC 59 68812912 68812930 TCTTCCTCTTCTTCCACCT 59 NA Nonspecific Mus musculus 50 Lcorl ENSMUSG00000015882 ENSMUST00000016026,ENSMUST00000113981,ENSMUST00000087164 3 3 5 109 5 46127044 46127063 GGGATGGAGTGTTAGATCTC 58 46125709 46126973 GTTTCTGTGTAGTCTCCCAG 59 NA Mus musculus 50 Acot8 ENSMUSG00000017307 ENSMUST00000017451 1 1 2 95 2 164620650 164620668 ATCAAGATGCATTGCTGTG 58 164618502 164620592 GAGAGCCACCTTATACTTGG 59 NA Mus musculus 50 Ksr1 ENSMUSG00000018334 ENSMUST00000092866 2 1 5 81 11 78829753 78831809 GAGGAATACATTAACAGCAGC 59 78829692 78829710 TCTTTGGATTACCGGACTC 58 NA Mus musculus 50 Cog1 ENSMUSG00000018661 ENSMUST00000106623 2 1 3 151 11 113522310 113522328 CACTTTCAACTCCCAGGAG 59 113522529 113528088 ATTTCCTCTTGTGGAACTGG 59 NA Mus musculus 50 Rnf145 ENSMUSG00000019189 ENSMUST00000019333 3 1 2 88 11 44373549 44373567 GATTTGCCAGTTCTTCCAC 59 44373619 44374982 AAAGTGTTCCCAGAACCTG 59 NA Mus musculus 50 Myb ENSMUSG00000019982 ENSMUST00000020156 1 1 2 83 10 20864827 20864845 TCTTTGCTGACGTCATCAG 59 20862886 20864780 AAGTGTTCAAGAACTGCGA 59 NA Mus musculus 50 Spnb2 ENSMUSG00000020315 ENSMUST00000102838,ENSMUST00000039018 1 2 5 182 11 30059441 30097738 TCAAACAGCTCCAAGATGAG 59 30054387 30059296 CCTTAGTGGGTTTAGGCAG 59 NA Mus musculus 50 Acsl6 ENSMUSG00000020333 ENSMUST00000093106,ENSMUST00000108905,ENSMUST00000072178,ENSMUST00000094194 3 4 12 83 11 54150442 54150460 TGATCTTTCCGAGACAGGA 59 54150507 54151923 AGACAACAGACTGGATCAC 58 NA Mus musculus 50 Agxt2l2 ENSMUSG00000020359 ENSMUST00000101250 2 1 3 89 11 51413079 51413098 GCTGGATGACATTCTAACAG 58 51414120 51416312 GTAGGATGAGTATCTTCTGGG 58 NA Mus musculus 50 Tcn2 ENSMUSG00000020432 ENSMUST00000109993,ENSMUST00000109991,ENSMUST00000020710,ENSMUST00000109990,ENSMUST00000109988,ENSMUST00000109992,ENSMUST00000109989 2 7 7 96 11 3822083 3822101 TGTCACCATACGAACAGAC 59 3819400 3822023 GTCCCATACGTGAATCCTC 59 NA Mus musculus 50 Smek2 ENSMUSG00000020463 ENSMUST00000020755,ENSMUST00000101439,ENSMUST00000101438 2 3 4 85 11 29109417 29109435 TTTGGATAATGGAACTCGG 57 29109482 29111131 GAGACTTGATATCTTCCACTC 57 NA InUTR Mus musculus 50 Llgl2 ENSMUSG00000020782 ENSMUST00000021139,ENSMUST00000103032 3 2 2 88 11 115712223 115712329 GTCTTTGTCAAGTGCACAC 59 115712381 115712399 CGTAGAGACTTCTTGAGGG 58 NA Mus musculus 50 Sec14l1 ENSMUSG00000020823 ENSMUST00000021177,ENSMUST00000103026 2 2 3 81 11 117014522 117014540 ATGAAGACCTGAAGCTCTG 58 117014582 117016544 TGAATGAGAATCTCATGTGGAG 59 NA Mus musculus 50 Usp43 ENSMUSG00000020905 ENSMUST00000021288,ENSMUST00000108676 3 2 3 120 11 67690025 67693307 CATTACACAGCCTATTGCC 58 67689923 67689943 GGTAGAATAGGATGTAAGCCC 59 NA Mus musculus 50 Acly ENSMUSG00000020917 ENSMUST00000107389,ENSMUST00000007131,ENSMUST00000107385 2 3 5 87 11 100380476 100380941 AGGACAAGAAAGAAGTCCTG 59 100380408 100380426 GGGTTGATCTCAAGGTAGG 59 NA Mus musculus 50 Gosr2 ENSMUSG00000020946 ENSMUST00000107013 3 1 2 133 11 103547997 103548017 AGCTAAAGTATGATGTCCAGC 59 103540700 103547902 CTTCTGAGTCCCGTTAGTG 59 NA Mus musculus 50 Zmynd11 ENSMUSG00000021156 ENSMUST00000110636,ENSMUST00000110634,ENSMUST00000021584 2 3 5 60 13 9709425 9709443 TGAGTTCAGGCTTAGAGAC 58 9697943 9709402 CTTAATGCTCCTGCAAACTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Prpf4b ENSMUSG00000021413 ENSMUST00000021850,ENSMUST00000077853 2 2 2 81 13 34982505 34982525 GAGAATGTTGACACCTTTGAG 59 34982565 34983970 TCTGAGATGAGCCATTATTCTG 59 NA Mus musculus 50 Prpf4b ENSMUSG00000021413 ENSMUST00000021850 3 1 2 93 13 34991842 34992241 GCCAAATAAGATGATCCGG 58 34992296 34992316 CTCTGTCACTTTATCAACCTC 58 NA Mus musculus 50 Ssr1 ENSMUSG00000021427 ENSMUST00000021864 3 1 2 84 13 38075313 38075332 AGAAATGGGTACCTCAAGTC 59 38071662 38075268 GGGAGAAGCTTTATTGATCTG 58 NA Mus musculus 50 Ldb3 ENSMUSG00000021798 ENSMUST00000064098,ENSMUST00000090040 1 2 5 137 14 35392392 35392410 AGAACAAGATCAAGTCGGC 59 35386186 35391786 AATTGGCTACCACCTTCTG 59 NA Mus musculus 50 Nefl ENSMUSG00000022055 ENSMUST00000022639 3 1 1 155 14 68704137 68704155 TCGAGATTGCAGCTTACAG 59 68704661 68704680 CAGACATCAAGTAGGAGCTG 59 NA DesignNoJunction Mus musculus 50 Txndc11 ENSMUSG00000022498 ENSMUST00000038424 3 1 2 87 16 11075727 11079806 CCTGCAATAGAAAGGACCT 58 11075658 11075676 GAGTGATGCAGAATGAACC 58 NA Mus musculus 50 Trp63 ENSMUSG00000022510 ENSMUST00000115310,ENSMUST00000115306,ENSMUST00000040231 3 3 6 81 16 25885033 25886304 CATTGTCAGTTTCTTAGCAAGG 59 25886346 25886364 CTGATAGATGGTGGTCAGC 59 NA Mus musculus 50 Il15ra ENSMUSG00000023206 ENSMUST00000065131 2 1 7 173 2 11645181 11645199 CTCTTGCAGCAACAATGAC 59 11649455 11652210 GTAGAGATGGCCACTTCTG 59 NA Mus musculus 50 Centg3 ENSMUSG00000023353 ENSMUST00000024123,ENSMUST00000057281 2 2 2 82 5 23982247 23982461 TTAAAGTGGGCATAGTGGG 59 23982507 23982525 TTCCTGGACATAAGTCCCT 59 NA Mus musculus 50 Cyp39a1 ENSMUSG00000023963 ENSMUST00000024760 2 1 2 89 17 43819967 43819986 ATCAAGGAATTCTACCAGCA 58 43820038 43822144 TGACCAGTTTCTCAGAAGC 59 NA Mus musculus 50 1300018I05Rik ENSMUSG00000024019 ENSMUST00000024816 2 1 3 99 17 29832428 29834037 GAACTAATCAAGGACACTGAC 58 29834098 29834116 AACGATACTCCAACACAGG 59 NA Mus musculus 50 Incenp ENSMUSG00000024660 ENSMUST00000113168 1 1 2 107 19 9958265 9958283 AGAACCAGATGCTCATGAC 59 9952918 9958194 CAACAAAGCTGCACTTAGG 59 NA Mus musculus 50 D19Ertd652e ENSMUSG00000025067 ENSMUST00000026048 2 1 2 80 19 47886681 47888427 TTCTGGAATTGATGGTGTG 57 47886619 47886637 CCATCAAACTCGAGAAAGG 58 NA Mus musculus 50 R3hdm2 ENSMUSG00000025404 ENSMUST00000105249 3 1 5 198 10 126913740 126921035 CACATGATTTCACAGGCAG 59 126921195 126921215 GGCTAGAAGTGGAATAATTGG 58 NA Mus musculus 50 Apool ENSMUSG00000025525 ENSMUST00000026599,ENSMUST00000113414 2 2 3 104 X 109477866 109478075 AGGAAGAAAGCAAGGAAGG 59 109478143 109478161 TAATCACTGTTGCAGAGGC 59 NA Mus musculus 50 Sphkap ENSMUSG00000026163 ENSMUST00000056934 1 1 3 158 1 83264005 83264025 GTCTTGAAAGAAGACATACCC 58 83260400 83263887 TACTAATTCACTCATGGACCG 59 NA Mus musculus 50 Fn1 ENSMUSG00000026193 ENSMUST00000055226,ENSMUST00000097700 1 2 3 80 1 71651594 71651614 GTACGTGGTTAGTGTTTATGC 59 71650494 71651552 CGATCAATGTTGGTCACTG 58 NA Mus musculus 50 Avpr1b ENSMUSG00000026432 ENSMUST00000027690 2 1 1 60 1 133496430 133496449 TTGGTATCCTAGCTACTGTC 57 133496472 133496490 ATCAGTAGTACAGCCAGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Elk4 ENSMUSG00000026436 ENSMUST00000086556,ENSMUST00000027696 1 2 2 158 1 133915012 133915030 GTCTCTTACACCAGCACTC 59 133916039 133920143 AGTACAGAGGGAAACTGGA 59 NA Mus musculus 50 Ak1 ENSMUSG00000026817 ENSMUST00000113278,ENSMUST00000113277,ENSMUST00000068271 1 3 3 147 2 32486704 32488823 GAACAGAAGATTGGACAGC 58 32488934 32488952 TGTAATAAGTCTCCAGCCG 58 NA Mus musculus 50 Dnm1 ENSMUSG00000026825 ENSMUST00000113350,ENSMUST00000113352,ENSMUST00000091089,ENSMUST00000113365,ENSMUST00000035664,ENSMUST00000002626 1 6 9 80 2 32190337 32191310 TATCCATGGCATCAGAACG 59 32190275 32190293 CGAATCTTCTTCACCTGCT 59 NA Mus musculus 50 Nr4a2 ENSMUSG00000026826 ENSMUST00000112629,ENSMUST00000112627,ENSMUST00000067024,ENSMUST00000028166 1 4 4 80 2 56961670 56962536 GACTATTCCAGGTTCCAGG 59 56961608 56961626 GAGATCGTAGAACTGCTGG 59 NA Mus musculus 50 Zeb2 ENSMUSG00000026872 ENSMUST00000068415,ENSMUST00000076836,ENSMUST00000028229 1 3 3 80 2 44878419 44878437 GCTAAGGGAGAGTGTTGTG 59 44872979 44878375 TTCATTTCTTCTGGACCGG 59 NA Mus musculus 50 Tfpi ENSMUSG00000027082 ENSMUST00000111718,ENSMUST00000028487,ENSMUST00000090732,ENSMUST00000111714,ENSMUST00000111717,ENSMUST00000111712 3 6 8 88 2 84284292 84284911 TCTGTGAGAATCCAGTCCA 59 84284222 84284242 GCGATCAGTTACAGTATTTCC 58 NA Mus musculus 50 4930430A15Rik ENSMUSG00000027157 ENSMUST00000111010 2 1 2 80 2 111004645 111009761 TCAAGAGAAAGACTCTCCTG 58 111004497 111004516 GATTCTTCTTGTGCAATGGA 58 NA Mus musculus 50 Ext2 ENSMUSG00000027198 ENSMUST00000111250 2 1 4 96 2 93570383 93570401 TACGACGAAATCGAGACAG 59 93557959 93570324 ATTCTGTCTGCTCATAACCA 58 NA Mus musculus 50 Snap25 ENSMUSG00000027273 ENSMUST00000028727 1 1 2 101 2 136595818 136595839 GATGGACCAAATCAATAAGGAC 59 136595898 136599639 GATTTAAGCTTGTTACAGGGAC 59 NA Mus musculus 50 4930402H24Rik ENSMUSG00000027309 ENSMUST00000044766,ENSMUST00000103190,ENSMUST00000110248,ENSMUST00000110247 3 4 6 85 2 130623997 130632621 AACATGCTTTCAGAAGACCT 59 130623931 130623949 AGCAGGAAAGGGATTTCTG 59 NA Mus musculus 50 Arfgap1 ENSMUSG00000027575 ENSMUST00000108862,ENSMUST00000108863,ENSMUST00000029092,ENSMUST00000098981,ENSMUST00000108861,ENSMUST00000108860,ENSMUST00000108859 3 7 7 110 2 180706760 180706779 CTAAGTTCCGAGAGTTCCTG 59 180706852 180707409 AAGTAGCCACCTTATCCCT 59 NA Mus musculus 50 BC006779 ENSMUSG00000027580 ENSMUST00000108831,ENSMUST00000087446,ENSMUST00000094203 1 3 4 126 2 180964955 180965046 CTTAGAGTGTACAGGAGAGTC 58 180964849 180964867 GGATCTGTCGAACATTCAG 57 NA Mus musculus 50 Ndrg3 ENSMUSG00000027634 ENSMUST00000069600,ENSMUST00000072298,ENSMUST00000109558 3 3 3 82 2 156775820 156775839 GTCACCATAAGAGGCTTACC 59 156774086 156775776 AAGCAGGACTTATGGTTGAG 59 NA Mus musculus 50 2610304G08Rik ENSMUSG00000027651 ENSMUST00000109517,ENSMUST00000109519,ENSMUST00000029180,ENSMUST00000103123,ENSMUST00000099135,ENSMUST00000109518 3 6 6 92 2 157873688 157873706 AGCAGATACAAGAGGAGGA 59 157873759 157875838 TGATTAACTCCTCAGTCAAGAG 59 NA Mus musculus 50 Extl2 ENSMUSG00000027963 ENSMUST00000029575,ENSMUST00000106501,ENSMUST00000106502 2 3 3 80 3 115728304 115729940 AATTTGGCAGCAATTTCCTG 59 115729983 115730001 TAACTGTAGATCCCGGAGG 59 NA Mus musculus 50 Rap1gds1 ENSMUSG00000028149 ENSMUST00000098574 3 1 2 106 3 138646765 138646783 TGACCATTTAAGGTCGCTG 59 138628952 138646697 GAAGGGAATCATTCTCATTGC 59 NA Mus musculus 50 Pdlim5 ENSMUSG00000028273 ENSMUST00000029941,ENSMUST00000084039 2 2 4 81 3 142015705 142015724 GGGCTCCTTGAATATGACTC 59 141975494 141977376 CTTAGGTTCACCCTTCTGG 59 NA Mus musculus 50 2310039E09Rik ENSMUSG00000028348 ENSMUST00000030033,ENSMUST00000107701 2 2 2 60 4 48684865 48684885 CTGTTGTTAAAGACAGAAGCC 59 48684907 48684925 GGATCGAAGACTTCTTCGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700022I11Rik ENSMUSG00000028451 ENSMUST00000098111,ENSMUST00000030163 2 2 2 100 4 42982966 42982985 GGAATCTGGCCATACTAGTC 59 42983048 42983066 TTTATCTCCAGAGCACCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Snapc3 ENSMUSG00000028483 ENSMUST00000030206 3 1 3 83 4 83097203 83098950 ATGTATACAGCTAGATGGGT 57 83098995 83099014 CATTCTGAAGCAAACATCAC 57 NA Mus musculus 50 Tm2d1 ENSMUSG00000028563 ENSMUST00000030292 3 1 3 121 4 98041703 98047325 AAACTACACAGCTCATGCA 59 98037264 98041619 AATAGCCATTCACATTTCGG 58 NA Nonspecific Mus musculus 50 Nfia ENSMUSG00000028565 ENSMUST00000097969,ENSMUST00000107062,ENSMUST00000075448,ENSMUST00000107061 1 4 7 109 4 97450295 97623073 CATGCAGCAGATTCAAGTC 59 97667098 97667116 GATGTGACAAAGCTGTCCT 59 NA Nonspecific Mus musculus 50 Cc2d1b ENSMUSG00000028582 ENSMUST00000030320 3 1 2 86 4 108299714 108299905 CTGTTCCTCCAGGATTTCC 59 108299955 108299973 CAGTTGCTAAAGTTGCTGC 59 NA Mus musculus 50 Cpt2 ENSMUSG00000028607 ENSMUST00000030345,ENSMUST00000106721 1 2 4 76 4 107579552 107579570 AGTGCTCCAAATACCATGG 59 107577137 107577155 TAGAGCAAACAAGTGTCGG 59 NA DesignNoJunction Mus musculus 50 Ipp ENSMUSG00000028696 ENSMUST00000106479,ENSMUST00000030461 3 2 2 81 4 116202400 116203022 AATCTATGCTTTGGGTGGG 59 116203065 116203085 TTCCCACTTATTCTCATCAGG 59 NA Mus musculus 50 Rad54l ENSMUSG00000028702 ENSMUST00000102705,ENSMUST00000102704 2 2 2 82 4 115772346 115772884 AGCTGTGTAATCATCCAGC 59 115772282 115772300 TGGGAAGATACCCAAAGTG 58 NA Mus musculus 50 Capzb ENSMUSG00000028745 ENSMUST00000102507,ENSMUST00000102508,ENSMUST00000030519,ENSMUST00000116268,ENSMUST00000030518,ENSMUST00000042675 3 6 6 114 4 138836492 138842955 CCAGACAGATGGAGAAAGAC 59 138843693 138843711 TAGATCTCATTCAGCGTGC 59 NA Mus musculus 50 Bai2 ENSMUSG00000028782 ENSMUST00000106017,ENSMUST00000106015,ENSMUST00000106012,ENSMUST00000030571,ENSMUST00000097868,ENSMUST00000106018 3 6 6 81 4 129698485 129698812 ACTTGGACTTTGAGAAGGTG 59 129698856 129698874 AAAGTGTGGAACTTCTGGT 58 NA Mus musculus 50 Csf3r ENSMUSG00000028859 ENSMUST00000106162,ENSMUST00000030673 1 2 3 94 4 125709461 125709479 GTATATGGCCATCTGGGTG 59 125709536 125711425 GCTCCAATTTCACAACATCC 59 NA Mus musculus 50 Pftk1 ENSMUSG00000028926 ENSMUST00000030763,ENSMUST00000088858 1 2 5 80 5 5380054 5380072 GTTGAGGAGAACTTTGTCC 57 5249218 5373468 GTGACACATATCTCATCAAAGG 58 NA Mus musculus 50 Ttll10 ENSMUSG00000029074 ENSMUST00000051509,ENSMUST00000105577,ENSMUST00000097731,ENSMUST00000030951 2 4 4 80 4 155421307 155421469 GGAGCATCAATAATCAGCA 57 155421245 155421263 TAGCTTGTAGTCCTCACAG 57 NA Mus musculus 50 Glmn ENSMUSG00000029276 ENSMUST00000082121,ENSMUST00000078021 3 2 3 81 5 107986986 107987004 TCTCTGTTAGACCTGGTCC 59 107986351 107986943 ATGAAGCCATAATCCTGTCTG 59 NA Mus musculus 50 Nos1 ENSMUSG00000029361 ENSMUST00000086451,ENSMUST00000111935 1 2 4 94 5 118364444 118369415 GAGAGGAAGAGCTACAAGG 58 118369473 118369491 AAGTTGTCTCTGAGGTCTG 58 NA Mus musculus 50 Tmed2 ENSMUSG00000029390 ENSMUST00000076160 3 1 2 86 5 124993121 124993139 GTTCACCATTGACATTGGG 59 124993511 124996917 TTGTTCTGATGAGCATCCC 59 NA Nonspecific Mus musculus 50 Uso1 ENSMUSG00000029407 ENSMUST00000031355,ENSMUST00000097035 2 2 2 82 5 92617083 92617101 AAACTTTCCGAGTCCAGAG 59 92617146 92618263 CCTTGGTAATAACACCTTCG 58 NA Mus musculus 50 Usp12 ENSMUSG00000029640 ENSMUST00000085614,ENSMUST00000031645 3 2 2 188 5 147563346 147563478 ACTGCTTAAGAGGGTTCAG 58 147551973 147551993 GATAAGAAAGCTTCGTGTACC 58 NA Mus musculus 50 Plcz1 ENSMUSG00000030230 ENSMUST00000032355 1 1 2 191 6 139971803 139971821 GTCAATTGAAGGTTTCGCA 58 139968972 139971650 CACAGGTGTCTTACATATCCC 59 NA Mus musculus 50 Plekhb1 ENSMUSG00000030701 ENSMUST00000107046,ENSMUST00000079176,ENSMUST00000107047,ENSMUST00000107045,ENSMUST00000116288,ENSMUST00000116287,ENSMUST00000107044 2 7 7 187 7 107802200 107803126 GATGATGCCATAGCATGGA 59 107794152 107794170 TAGTAGTCCTGATACGGGC 59 NA Mus musculus 50 Parva ENSMUSG00000030770 ENSMUST00000106643 1 1 3 131 7 119571607 119687703 CAAAGAAGTATCCGAGTTCCA 59 119688262 119688280 TTTGGATCGACCATTGTCC 59 NA Mus musculus 50 9030624J02Rik ENSMUSG00000030982 ENSMUST00000106551 3 1 4 82 7 125903690 125903710 TCAGACACGAGTGTTATTCAG 59 125903753 125905292 GAAGGAACATTTCCAAACGT 58 NA Mus musculus 50 Enox2 ENSMUSG00000031109 ENSMUST00000114911 1 1 6 99 X 46372067 46376317 ACGACAATTTACAGCAGGA 59 46371986 46372004 TTGACAGGATTGCTGACTG 59 NA Mus musculus 50 Gripap1 ENSMUSG00000031153 ENSMUST00000115671 1 1 4 81 X 7377453 7378307 CTACAAGGCTTAGAGCTCTC 59 7378445 7378464 ACAGTGTTTCCTTCTCTGTC 59 NA Mus musculus 50 Pqbp1 ENSMUSG00000031157 ENSMUST00000033497,ENSMUST00000115655,ENSMUST00000115654 1 3 3 88 X 7472998 7473126 TAATGCAGATGCTGAGGAC 59 7472928 7472946 CTGGCTTCTCATGACTACG 59 NA Mus musculus 50 Rpgr ENSMUSG00000031174 ENSMUST00000044789,ENSMUST00000115544 2 2 13 82 X 9644722 9646511 GTCATCTGCAAACAGAAGC 59 9644658 9644677 TTAAAGTAGGCACCATCGAC 59 NA Mus musculus 50 4930447F04Rik ENSMUSG00000031182 ENSMUST00000033525 2 1 1 60 X 63556837 63556857 TAGGAAGTGGAAAGAAAGGAG 59 63556797 63556815 TTTCTTGGACTGATACCGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rs1 ENSMUSG00000031293 ENSMUST00000033650 3 1 2 82 X 157219826 157228710 CTTAGACTGTATTCCAGAATGC 58 157228753 157228771 AGCAAGTGATCTGATCTGG 59 NA Mus musculus 50 Nlgn3 ENSMUSG00000031302 ENSMUST00000113671,ENSMUST00000065858 1 2 2 80 X 98502462 98504103 ATGAAGATGAAGACATCCGA 58 98504145 98504164 CTGTTCCTTCCATGTAAGAG 57 NA Mus musculus 50 Zmym3 ENSMUSG00000031310 ENSMUST00000063577,ENSMUST00000101346 1 2 2 80 X 98610734 98611107 CTGGAGAGGTTCTTCATGAG 59 98610673 98610691 CTCGGAATTTGGAGAAGCA 59 NA Mus musculus 50 Gpm6b ENSMUSG00000031342 ENSMUST00000112236,ENSMUST00000060210,ENSMUST00000112228,ENSMUST00000112229 1 4 12 80 X 162821868 162821887 TCTACATGTCCTATCACCTG 57 162821930 162824899 TCATGAGGAAGTGGATCAG 58 NA Mus musculus 50 Ard1 ENSMUSG00000031388 ENSMUST00000114387,ENSMUST00000114389,ENSMUST00000033763,ENSMUST00000096316 2 4 6 112 X 71164879 71165105 ATGTCAGGAAGAGTAACAGG 58 71163212 71163230 CATTGCATACGCATCTTCC 59 NA Mus musculus 50 Rbm41 ENSMUSG00000031433 ENSMUST00000113007,ENSMUST00000113011,ENSMUST00000033810,ENSMUST00000096311 1 4 5 82 X 136502789 136502807 AAATCGTTTGTCAGAGGAG 57 136489584 136502744 GATATAGCACCTTGTTTGGT 57 NA Mus musculus 50 Hpgd ENSMUSG00000031613 ENSMUST00000034026 1 1 1 60 8 58773839 58773857 CTGACCAGAAACAACTGAG 57 58777174 58777192 TCCAATCTTCCGAAATGGT 58 NA DesignNoJunction Mus musculus 50 Cbfb ENSMUSG00000031885 ENSMUST00000109392 2 1 4 80 8 107726408 107726427 ATTTGAGGATAGAGACAGGT 57 107726470 107739813 GTCTTCTTGCCAGTTACTG 58 NA Mus musculus 50 Gpr83 ENSMUSG00000031932 ENSMUST00000115626,ENSMUST00000115625,ENSMUST00000034408,ENSMUST00000115624 2 4 4 80 9 14671415 14672625 CTTCAAGTACAGTGAGGAC 57 14672668 14672687 AGATACTTCCAGAAGAGGTC 57 NA Mus musculus 50 Rexo2 ENSMUSG00000032026 ENSMUST00000034524 3 1 2 82 9 48283274 48283292 TGATTATCAAACAGCCGGA 58 48282604 48283229 CTTGGTAAGACCAGACTTCC 59 NA Mus musculus 50 Cadm1 ENSMUSG00000032076 ENSMUST00000085909,ENSMUST00000114542 1 2 5 149 9 47626887 47637464 TACCATCATCACAGACACC 58 47656334 47656352 ATGATGAGCAAGCATAGCA 59 NA Nonspecific Mus musculus 50 Robo4 ENSMUSG00000032125 ENSMUST00000115048,ENSMUST00000102895,ENSMUST00000063237,ENSMUST00000115046 1 4 4 97 9 37219200 37219218 TGATACTCACTTTGCTCGT 58 37219279 37220622 ATGAGGCATCAGTGAAGAC 59 NA Nonspecific Mus musculus 50 A930018P22Rik ENSMUSG00000032671 ENSMUST00000040374 3 1 1 133 2 103963304 103963322 CTCTGCGCTTCTTCTACTC 59 103963418 103963437 CTTAATCCGGATCTCTAGCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ap4b1 ENSMUSG00000032952 ENSMUST00000076599,ENSMUST00000106824,ENSMUST00000047285 1 3 4 87 3 103619231 103621687 CATCTTCGCCATAGGTAGC 59 103621738 103621756 ATGTTCTTGTCGAAGTCCC 59 NA Mus musculus 50 Slc35d2 ENSMUSG00000033114 ENSMUST00000099441,ENSMUST00000091559 3 2 3 81 13 64200631 64200649 CTGATGTACTCCACAGCTC 59 64199696 64200587 CCGATACATTCTTGATCGCT 59 NA InUTR Mus musculus 50 Shf ENSMUSG00000033256 ENSMUST00000110532,ENSMUST00000110531,ENSMUST00000048635 1 3 4 203 2 122183020 122185196 AAGATGATGGCTGAGATCC 58 122182835 122182853 AATCCGTTCCTTCTTCCAC 59 NA DesignRelaxed Mus musculus 50 Terf2ip ENSMUSG00000033430 ENSMUST00000052138 2 1 1 127 8 114539315 114539333 ACAACAAGCTGTTTGAGGA 59 114541801 114541819 TGTTTCTGAGTCTTCCTCG 58 NA DesignNoJunction Mus musculus 50 St18 ENSMUSG00000033740 ENSMUST00000115503,ENSMUST00000115501,ENSMUST00000043578,ENSMUST00000115499,ENSMUST00000115497 1 5 5 80 1 6785650 6792412 CACTGCAGATGAAATCATGG 59 6792455 6792473 TCTTTCTTCTGGAGTGAGC 58 NA Mus musculus 50 D930015E06Rik ENSMUSG00000033767 ENSMUST00000052342 2 1 2 156 3 83713245 83714298 AGAGGAGGACAGTTACTACC 59 83713108 83713126 CCTCCTGTCACAATCAGAG 59 NA Mus musculus 50 Exoc6b ENSMUSG00000033769 ENSMUST00000101224 3 1 4 113 6 84939501 84939520 TTATCCTGCACTGAAGACAC 59 84939405 84939425 TTATTTCCTCCCGACTTGG 58 NA Mus musculus 50 Tmub2 ENSMUSG00000034757 ENSMUST00000036376,ENSMUST00000107144,ENSMUST00000100387 3 3 3 107 11 102149116 102149134 TCAAGTTCCTCAATGACAC 57 102149409 102149427 TCAACTTCATTTGGCTCTC 57 NA DesignNoJunction Mus musculus 50 Ap1gbp1 ENSMUSG00000034940 ENSMUST00000049714 2 1 2 80 11 83822988 83823007 GCATGTCATGTCTGATAGCT 59 83823048 83832877 CTTAAGTCCTCTGTATCTGCG 59 NA Mus musculus 50 C8a ENSMUSG00000035031 ENSMUST00000048947 1 1 3 181 4 104494631 104494649 GTGTCAGTGTAGTATGGGC 59 104488506 104490169 CATGTTGATCTCCATTCTTGG 59 NA Mus musculus 50 Snf1lk2 ENSMUSG00000037112 ENSMUST00000041375,ENSMUST00000068484 2 2 2 97 9 50803765 50806612 TGTATCAGGTAATGGAGACC 58 50743657 50743675 TAATCGGCCATGATTAGCA 58 NA Mus musculus 50 4932438A13Rik ENSMUSG00000037270 ENSMUST00000057272 3 1 3 80 3 36921381 36925016 CAACATCCAGGATACATTTCC 58 36925057 36925076 GATGAATAATGCGATGGACC 58 NA Mus musculus 50 Tacc3 ENSMUSG00000037313 ENSMUST00000079534,ENSMUST00000074849 3 2 4 134 5 34009385 34009723 AACTTCCTCGTTTAAGGAGTC 59 34010614 34010632 TCCTCCTCTGTATCCTGTG 59 NA Mus musculus 50 3110057O12Rik ENSMUSG00000037818 ENSMUST00000108078,ENSMUST00000076920 3 2 4 80 3 40720869 40723308 AACCCTTATTATGGCTGCA 58 40727358 40727377 TCCCATCACAAATAGGTCTG 59 NA Mus musculus 50 Mll3 ENSMUSG00000038056 ENSMUST00000045291,ENSMUST00000088250 2 2 3 112 5 24804772 24804791 CCTCTTCCCTTCTAACTCAG 58 24801420 24804698 CAAAGTTTGCAATCCTTCTG 57 NA Mus musculus 50 C730027P07Rik ENSMUSG00000038233 ENSMUST00000043011,ENSMUST00000098269 2 2 2 138 9 121886743 121887351 ATAGATGGGTTTCCAGAGTC 58 121887452 121887470 TCTCAAGGACATGCTTCAG 59 NA Mus musculus 50 Smg6 ENSMUSG00000038290 ENSMUST00000045281,ENSMUST00000108443 3 2 3 82 11 74867455 74952702 CCTCGGATAAGGTTATTGC 57 74952748 74952766 CTCTTCTTGTCCACAAAGG 57 NA Mus musculus 50 Sbf2 ENSMUSG00000038371 ENSMUST00000106698 2 1 3 97 7 117453723 117453742 TAGAAATGGTTATCCCTGCC 59 117452983 117453002 AGTTATACACTCGCTGCTG 59 NA Mus musculus 50 C030046E11Rik ENSMUSG00000038658 ENSMUST00000043610 2 1 2 80 19 29649295 29649316 GGAATATGGAGGTCTTTCTCTG 59 29649357 29650352 GACCTGTAAGCGAAGTCTC 59 NA Mus musculus 50 2010001E11Rik ENSMUSG00000039339 ENSMUST00000045526 1 1 1 60 10 39643558 39643576 GTTTGGTGCTTCAATTGGT 59 39641969 39641987 CCAGAGATCCAAGATGAGG 58 NA DesignNoJunction Mus musculus 50 Rxrb ENSMUSG00000039656 ENSMUST00000044858,ENSMUST00000044956,ENSMUST00000116612 2 3 3 88 17 34173900 34174120 TTTAATCCAGACGCCAAGG 59 34174172 34174190 TTGCAATAGGTCTCCAGTG 59 NA Mus musculus 50 Kmo ENSMUSG00000039783 ENSMUST00000111170,ENSMUST00000040250 3 2 3 102 1 177586924 177588460 ATTACATAGAGATGCGAGCG 59 177588524 177588543 AGAGGGATAAAGGTAGAGGG 59 NA Mus musculus 50 Plcb4 ENSMUSG00000039943 ENSMUST00000110108 2 1 4 89 2 135787548 135790799 TCAAGAAGACCTCAGATGAC 58 135792787 135792806 TATAAGATGCCATCCATGCT 58 NA Mus musculus 50 Arhgef10l ENSMUSG00000040964 ENSMUST00000069623,ENSMUST00000105800,ENSMUST00000105799,ENSMUST00000105798 2 4 7 157 4 140124682 140126186 CAACATCAACTTCAAGCCC 59 140124308 140124327 GATTGTCTTTGTCGTAGGTG 58 NA Mus musculus 50 Ramp3 ENSMUSG00000041046 ENSMUST00000045374 1 1 1 102 11 6574842 6574860 TGACATGATGCAGAAGGTG 59 6576513 6576531 GATGTTGGTCTCCATCTCG 59 NA DesignNoJunction Mus musculus 50 Uspl1 ENSMUSG00000041264 ENSMUST00000100410 1 1 2 105 5 150025002 150025023 GAGACACATATCGTTATTTGGG 58 150025088 150025607 CTTCAATTCCTGATACAGGC 58 NA Mus musculus 50 Tardbp ENSMUSG00000041459 ENSMUST00000055827,ENSMUST00000095719 1 2 6 90 4 147992817 147992837 GCTGAACCTAAGCATAATAGC 58 147991806 147992765 TGAGATGAACCTGATTCCC 58 NA Mus musculus 50 Mbp ENSMUSG00000041607 ENSMUST00000047865,ENSMUST00000091789 2 2 10 158 18 82691468 82691486 TGGAAAGAAGAGAAGCGTG 59 82723789 82723808 CCTTGCCAGTTATTCTTTGG 59 NA DesignNoJunction Mus musculus 50 Ptpre ENSMUSG00000041836 ENSMUST00000073961 2 1 3 80 7 142843519 142843780 TACTTCTTCAGGTTCCGGA 59 142843822 142843842 CTCTTCTAAGATCCCGTTAGG 59 NA Mus musculus 50 Git2 ENSMUSG00000041890 ENSMUST00000102579,ENSMUST00000112185,ENSMUST00000043283,ENSMUST00000112183 2 4 5 88 5 115195494 115195512 CCAGACTATGACAGTGTGG 59 115189277 115195443 TGGAGAGTTTGAAGCTTCTG 59 NA Mus musculus 50 Rnpep ENSMUSG00000041926 ENSMUST00000074357 3 1 2 186 1 137175344 137175364 ACGTATTCGGCTCTTATTGAG 59 137168325 137173969 TAAAGAGCAAGTCATACCTGG 59 NA Mus musculus 50 A530082C11Rik ENSMUSG00000042202 ENSMUST00000116253,ENSMUST00000105608,ENSMUST00000105606,ENSMUST00000043829 2 4 4 107 4 154990356 154991735 TTCTTCATGGATATCCCTGTG 59 154991803 154991822 ACTCTGAAGGTGAAACAAGG 59 NA Mus musculus 50 Pm20d1 ENSMUSG00000042251 ENSMUST00000048660,ENSMUST00000112393 2 2 2 80 1 133701216 133701479 TTGTGAGCAGGATAATGGAG 59 133701522 133701540 CTGCATTGAACATGGTGAG 59 NA Mus musculus 50 Dlgap3 ENSMUSG00000042388 ENSMUST00000046659,ENSMUST00000106094,ENSMUST00000106092 2 3 3 97 4 126892159 126892177 CATCATCAAGACCATCCCT 58 126892238 126892557 CTGAGATTGTCTCCACCTG 59 NA Mus musculus 50 Dlgap3 ENSMUSG00000042388 ENSMUST00000046659,ENSMUST00000106094,ENSMUST00000106092 1 3 3 96 4 126892160 126892178 ATCATCAAGACCATCCCTG 58 126892238 126892557 CTGAGATTGTCTCCACCTG 59 NA Mus musculus 50 Dmtf1 ENSMUSG00000042508 ENSMUST00000095017,ENSMUST00000115353 2 2 5 81 5 9124519 9127966 TCATTTCCTGCTTCAACAG 57 9124456 9124475 ATGTTTGTAGTGTTCCACTG 58 NA Mus musculus 50 Dcst1 ENSMUSG00000042672 ENSMUST00000070820,ENSMUST00000039572 3 2 2 91 3 89160854 89161406 ACATTGCCAAGGTGATAGAG 59 89160782 89160800 GATAGACTGGTTGACCGAG 59 NA Mus musculus 50 Krba1 ENSMUSG00000042810 ENSMUST00000031815 1 1 2 84 6 48355376 48356304 CCCTTACCTGCTAGAACTG 59 48356352 48356370 TGGAATGAATGGAGGTCTC 58 NA Nonspecific Mus musculus 50 Disc1 ENSMUSG00000043051 ENSMUST00000074562,ENSMUST00000098311 2 2 3 134 8 127672346 127672364 GTCAGAGAACTCACTGCTC 59 127679003 127688903 GAAGCAGCTTCCTGATAGG 59 NA Mus musculus 50 Dpy19l1 ENSMUSG00000043067 ENSMUST00000086251 3 1 3 130 9 24286470 24286489 AAGACTATTGTGGAAGCACC 59 24279884 24286377 CTGGCTAAGATCACCTCAG 59 NA Mus musculus 50 2410025L10Rik ENSMUSG00000043323 ENSMUST00000056124,ENSMUST00000086651 3 2 3 62 5 110806411 110807059 CCGTTTGACAAGTTCTCAC 58 110805481 110806386 GTTTGAAGTGTTGGAATGTC 57 NA DesignRelaxed Mus musculus 50 Defb13 ENSMUSG00000044222 ENSMUST00000060587 1 1 1 60 8 23058967 23058986 CATTGTACAGAAGGTTCCTC 57 23059009 23059027 GTAAAGCACTCAGCTTCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 2310057J16Rik ENSMUSG00000044433 ENSMUST00000057028,ENSMUST00000111066 1 2 2 85 8 3598913 3598932 GAAGACAGAACAAGAAGCAG 58 3598980 3600685 GATATCGAATCGAGGGCTG 59 NA Mus musculus 50 4632419K20Rik ENSMUSG00000044465 ENSMUST00000074686 1 1 2 80 7 112529724 112532299 CACTGGTAAGATTGAGAGC 57 112529662 112529680 GCAATGAGGTACTTCTTGG 58 NA Mus musculus 50 2900010J23Rik ENSMUSG00000044627 ENSMUST00000113400,ENSMUST00000113395,ENSMUST00000050410 2 3 4 65 2 32136316 32137216 TTAATAGCAGAGGGCTACC 58 32136269 32136287 ATTGTACTCATGGAGGAGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Ccdc73 ENSMUSG00000045106 ENSMUST00000111114 3 1 4 81 2 104747793 104747812 ATTCAGCTCCTCGATTTCAG 59 104747853 104754833 CATATTGAGTCTCTGCTTTCCT 59 NA Mus musculus 50 BB220380 ENSMUSG00000046207 ENSMUST00000060441 2 1 2 124 11 68347363 68347382 CAGGCTTACTACAGACTCAG 59 68347781 68349619 GATGCTTCTGGATCCTGTC 59 NA Mus musculus 50 Olfr71 ENSMUSG00000046450 ENSMUST00000107862,ENSMUST00000055401 1 2 2 60 4 43718648 43718667 ATGTACATGAAACCCAAGAG 57 43718607 43718625 AGAGGACTGTAAAGACCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 D8Ertd457e ENSMUSG00000047710 ENSMUST00000051870 3 1 1 60 8 13877906 13877924 CAGAGGCACCGATTATGAG 59 13877947 13877966 ACAGAACTCAGGATGAATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Flrt1 ENSMUSG00000047787 ENSMUST00000058854 3 1 2 174 19 7171712 7179587 CAGCAGAGGAGGTATTGAG 59 7171556 7171574 AACAGAGAAACAGCCAGTC 59 NA InUTR Mus musculus 50 Ang2 ENSMUSG00000047894 ENSMUST00000051274 1 1 1 60 14 51815364 51815383 CACCAAGAACAACATCAAGG 59 51815323 51815342 TAAATTTCGTCCATAAGGGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Col6a3 ENSMUSG00000048126 ENSMUST00000097653,ENSMUST00000056925 2 2 3 81 1 92726765 92726783 CTAGTGGCTGTCTTTAGCC 59 92713095 92726722 TCTTGTTGACTTCCATGACTC 59 NA Mus musculus 50 6530418L21Rik ENSMUSG00000048458 ENSMUST00000066610,ENSMUST00000098273 1 2 2 60 3 105519995 105520013 CTTTCTAAGGGCTCAGGAC 59 105520035 105520055 TTTCAATATGTCTGGGCTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bdnf ENSMUSG00000048482 ENSMUST00000053317,ENSMUST00000111051,ENSMUST00000111049,ENSMUST00000111047,ENSMUST00000111046,ENSMUST00000111050,ENSMUST00000111052,ENSMUST00000111045,ENSMUST00000111044,ENSMUST00000111043,ENSMUST00000111042 3 11 11 60 2 109564058 109564076 ACAGTCCTAGAGAAAGTCC 57 109564099 109564118 TGGTCTCGTAGAAATACTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Thnsl1 ENSMUSG00000048550 ENSMUST00000054591,ENSMUST00000114584 3 2 4 145 2 21131594 21131612 TCAGTGAGTTAAGCACAGC 59 21133069 21133087 GTGACATCTGGTCAAGGTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Cdca2 ENSMUSG00000048922 ENSMUST00000049543 1 1 2 80 14 68316798 68316817 AATCCAACCTCTGTGATGAC 59 68316220 68316756 TTTCTCTACCTGCTCTTCCT 59 NA Mus musculus 50 Cdca2 ENSMUSG00000048922 ENSMUST00000049543 2 1 2 81 14 68316812 68318252 AGAGAATGGAAAGGAATCCA 58 68316750 68316768 TCTTCCTTCCTTGCAAGAG 59 NA Mus musculus 50 Lypd6 ENSMUSG00000050447 ENSMUST00000112712,ENSMUST00000053208 2 2 2 83 2 50029149 50029167 TTTCACCTGTGAGAAAGCA 59 50029214 50044243 CAGTATCTGGTGTCTCGAG 58 NA InUTR Mus musculus 50 Flrt3 ENSMUSG00000051379 ENSMUST00000110057 3 1 2 133 2 140488474 140488492 ACATATGTGCATTGGACTG 57 140487403 140487421 TAGTCCCGATGAGGAAGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Rps19bp1 ENSMUSG00000051518 ENSMUST00000052499 2 1 1 120 15 80091763 80091781 CCTGAAGTTTATGACCAGC 58 80091495 80091514 CTTCTTGTTCTTCGTCTTGG 58 NA DesignNoJunction Mus musculus 50 Pard3b ENSMUSG00000052062 ENSMUST00000075374,ENSMUST00000094906,ENSMUST00000046673 2 3 5 101 1 61814532 61814551 ACTGGGTGAAGATTCATCAC 59 61814612 62056890 CAGCAATCAGCTTATCTTTGTC 59 NA Mus musculus 50 Rps10 ENSMUSG00000052146 ENSMUST00000114882,ENSMUST00000114881,ENSMUST00000025052 2 3 3 60 17 27771273 27771291 CATGTAATGAAGGCCATGC 59 27771149 27771167 AAGCAAACTGTTCCTTCAC 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Cpne8 ENSMUSG00000052560 ENSMUST00000064391 2 1 3 112 15 90445548 90445566 TAAGAGTCCCAACTTGTCC 58 90415362 90432253 CTGGAATTCCTACTATTGGCT 59 NA Mus musculus 50 Gas1 ENSMUSG00000052957 ENSMUST00000109819,ENSMUST00000065086 1 2 2 102 13 60277474 60277492 TCGGTCAAAGAGAACATGG 59 60277390 60277408 CTTCGTCGTAGTAGTCGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tcf4 ENSMUSG00000053477 ENSMUST00000114985,ENSMUST00000114982,ENSMUST00000078486,ENSMUST00000114980 2 4 7 103 18 69508790 69621526 CTGGCTCAAATGTAGAAGAC 58 69625019 69625037 CATGTGGTCATAGGGAGTC 59 NA Mus musculus 50 BC055111 ENSMUSG00000054362 ENSMUST00000067387,ENSMUST00000106788 2 2 2 84 4 106287690 106287708 CAGAAGAAACCACAGAGCA 59 106286092 106287643 GGCCAGGATAATAATTCCCA 59 NA Mus musculus 50 Ceacam2 ENSMUSG00000054385 ENSMUST00000066503,ENSMUST00000064862 2 2 3 122 7 26313028 26323603 TCATGTACACAAGCCAGTG 59 26312924 26312942 AAGATCCAATGGATGTGGG 59 NA Mus musculus 50 Dnajc8 ENSMUSG00000054405 ENSMUST00000105940 2 1 5 103 4 132094196 132099981 CATTTGAGTTGTCCATCCT 57 132100582 132100600 CAGTAGCAACTTGTAAGCT 57 NA Mus musculus 50 Ugt1a1 ENSMUSG00000054545 ENSMUST00000073772 1 1 11 248 1 89968237 90111620 AGAAGTCACTTTCCAAGGA 58 90112451 90112724 TCTTTGGATGACCAAGCAG 59 NA DesignRelaxed Mus musculus 50 Rnf181 ENSMUSG00000055850 ENSMUST00000069580,ENSMUST00000069595 1 2 2 76 6 72311160 72311178 AGACTGTGATTGAGATGCC 59 72310935 72311123 GGAATTTGTCTTACTTAGCCAG 59 NA DesignRelaxed Mus musculus 50 1700008F21Rik ENSMUSG00000056018 ENSMUST00000108745,ENSMUST00000026912,ENSMUST00000108744 3 3 3 116 8 131660534 131662298 CAGCTATGTTACACAAAGCT 58 131669469 131669488 GTATTTCACCTTCTAGCAGG 57 NA Mus musculus 50 Pign ENSMUSG00000056536 ENSMUST00000070699,ENSMUST00000073314 1 2 4 93 1 107418698 107443252 TATTGGAACAAGCATCAGC 58 107418623 107418642 CTTTGTTGTGAGCAATTGTG 58 NA Mus musculus 50 Chd9 ENSMUSG00000056608 ENSMUST00000048665 2 1 2 80 8 93560439 93561313 AGATGTCAAAGGAAGGTGG 59 93561355 93561375 CATCTTCACCATCAAATGGTC 59 NA Mus musculus 50 Rbed1 ENSMUSG00000056698 ENSMUST00000114069,ENSMUST00000070990 2 2 2 81 6 72519307 72519325 CCCTTCTGTTTGATGTCTG 58 72518926 72519262 GATTACACTCCCTGGAGAG 58 NA Mus musculus 50 Capg ENSMUSG00000056737 ENSMUST00000071044,ENSMUST00000114073,ENSMUST00000114072,ENSMUST00000114071 1 4 4 82 6 72508244 72508744 TGTATAAGGTCTCTGATGCC 58 72508789 72508807 AATTAGCAGTTCAGAGGCA 58 NA Mus musculus 50 ENSMUSG00000072737 ENSMUSG00000056940 ENSMUST00000090650,ENSMUST00000096169 1 2 2 114 14 7423073 7423091 AAGAGAATGGCGATGAAGG 59 7422245 7422997 GTATTTCTAGGAGACCTGTGC 59 NA Mus musculus 50 AI842396 ENSMUSG00000057054 ENSMUST00000073625,ENSMUST00000108543,ENSMUST00000108542,ENSMUST00000108541 1 4 4 82 11 70503438 70503699 ATTCCACCAATTCTGAGGG 59 70503374 70503392 CAAAGCTTCTCAGGAGGAG 59 NA Mus musculus 50 Unc13d ENSMUSG00000057948 ENSMUST00000106450,ENSMUST00000106451,ENSMUST00000075036 3 3 4 81 11 115931066 115931085 TAAATCTGGTACAGGACGTC 58 115930920 115931022 ATCTTGAGGACATTGTGGA 58 NA Mus musculus 50 Kcnh1 ENSMUSG00000058248 ENSMUST00000110844,ENSMUST00000078470 3 2 2 82 1 194258729 194258748 GCTAGAATTCTACACAGCCT 59 194258793 194329155 GGAACACAATCCTCTTCCT 58 NA Mus musculus 50 Phf21a ENSMUSG00000058318 ENSMUST00000111297,ENSMUST00000068702,ENSMUST00000111294,ENSMUST00000111292 1 4 9 80 2 92189560 92189579 GTCACTTACCTTAACAGCAC 58 92191782 92197032 ATGGATATCACCCTTTGGC 59 NA Mus musculus 50 Zfp74 ENSMUSG00000059975 ENSMUST00000108212,ENSMUST00000108211 2 2 6 116 7 30717488 30720972 CGGAGGAATTTGCAATTATGG 59 30717392 30717410 GATTCAGCTTTGACGAGGT 59 NA Mus musculus 50 Sfmbt2 ENSMUSG00000061186 ENSMUST00000114868,ENSMUST00000114867,ENSMUST00000114862,ENSMUST00000114861,ENSMUST00000114864,ENSMUST00000041105,ENSMUST00000116594,ENSMUST00000070103 3 8 8 101 2 10323618 10323636 GAAGATACCAACCTGGAGG 59 10323700 10326073 GATCTCCACATGTCTGAAGG 59 NA Mus musculus 50 Obscn ENSMUSG00000061462 ENSMUST00000020732,ENSMUST00000052872 3 2 3 83 11 58864071 58864643 CAGAGTCAAAGAGCCTGAG 59 58864006 58864024 CAAGTGAACTCCACATCCT 59 NA Mus musculus 50 Inadl ENSMUSG00000061859 ENSMUST00000107035,ENSMUST00000107034 3 2 10 100 4 98104077 98104096 GCTAATTTGAGTGTGGAAGC 59 98104159 98107772 GAGCCTGGAACTTTCTCTG 59 NA Mus musculus 50 Arf2 ENSMUSG00000062421 ENSMUST00000057921,ENSMUST00000063347 3 2 3 93 11 103834364 103843012 CCAGAACACTCAAGGTCTG 59 103843069 103843087 TTCTGCTAGCATTCTGGTC 59 NA Mus musculus 50 Aurkaip1 ENSMUSG00000065990 ENSMUST00000105592,ENSMUST00000105591,ENSMUST00000084097 3 3 3 169 4 155206830 155206849 ACAAGTACCGTAAACTGGTC 59 155207074 155207092 CTTCAGGTAGATCTTCGGG 58 NA DesignNoJunction Mus musculus 50 OTTMUSG00000001246 ENSMUSG00000066137 ENSMUST00000107336,ENSMUST00000084480 1 2 2 118 4 73062874 73062892 CCACTCTTAGTAGGGAGAG 57 73062471 73062792 ATTATACAGAGCACCTGGA 57 NA Mus musculus 50 Lsm14a ENSMUSG00000066568 ENSMUST00000085585 1 1 2 148 7 35142900 35142918 CATGGAACAAGCAGTACAG 58 35142501 35142788 CTTTGTGTACTTCAGCTCG 58 NA Mus musculus 50 Macrod2 ENSMUSG00000068205 ENSMUST00000110058 2 1 10 87 2 142086889 142122262 AAGATGAAGCAGATTCTGCA 59 142122312 142122330 TTGGGAAGTTCTTGGTCAC 59 NA Mus musculus 50 Dap3 ENSMUSG00000068921 ENSMUST00000090938 2 1 2 139 3 88730953 88730972 CCTTGTCCACAATCTAAGGA 59 88729324 88730203 TAAATCCTTCCTTTCCCAGC 59 NA Mus musculus 50 Trcg1 ENSMUSG00000070298 ENSMUST00000093837,ENSMUST00000093836 1 2 2 81 9 57095747 57095765 CTTCACCAAGACCTTGGAG 59 57095810 57095922 GACTGAGGTTAGCTGTCTC 59 NA Mus musculus 50 NP_001074900.1 ENSMUSG00000070420 ENSMUST00000094116 3 1 1 109 5 146048184 146048202 CATTCTTCATGTGGGTCCA 59 146049169 146049187 TCATGTCTTTAAATGGCCC 57 NA DesignNoJunction Mus musculus 50 EG214403 ENSMUSG00000070594 ENSMUST00000111989,ENSMUST00000027612 2 2 3 80 1 141598549 141628116 GTATGCAAAGACTCAAGAGG 58 141598488 141598507 TTCTGGTAATGACAAGGAGG 59 NA Mus musculus 50 Rabepk ENSMUSG00000070953 ENSMUST00000113086,ENSMUST00000113088 2 2 3 102 2 34641241 34650702 CATGGACTTGGAAGACAGG 59 34641157 34641176 TAGTTGGTTTCCGATAGCTG 59 NA Mus musculus 50 AI132189 ENSMUSG00000070985 ENSMUST00000107697,ENSMUST00000095086 2 2 2 98 4 49462020 49462038 CTGAGAAACTGCAAGAGGT 59 49460755 49460773 AGATCACACCAATTCCTGG 59 NA DesignNoJunction Mus musculus 50 Ganab ENSMUSG00000071650 ENSMUST00000096246 3 1 2 92 19 8981806 8981824 TAGAAGATCGAAGCCTCCT 59 8981879 8982354 CTTTATCCGAGAAAGGGACC 59 NA Mus musculus 50 Gm114 ENSMUSG00000074749 ENSMUST00000099278 2 1 2 132 2 146689487 146689505 TATGTGAGTCTGAGAGGAG 57 146689600 146696515 GCCTCATATTCAGTCTTCAG 57 NA Mus musculus 50 OTTMUSG00000012686 ENSMUSG00000075425 ENSMUST00000113810,ENSMUST00000113809,ENSMUST00000113808,ENSMUST00000100229 2 4 4 80 2 29618997 29619017 ATCTCATTAGTCGGGTATCAC 58 29619304 29619422 ATGAGAAAGTCTTGGTCTCC 59 NA Mus musculus 50 TRBV3 ENSMUSG00000076463 ENSMUST00000103264 2 1 1 60 6 40998653 40998671 ACAGCAGATGGAGTTTCTG 59 40998693 40998713 CAGTTTAGACTTCTCCATGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Eif5a ENSMUSG00000078812 ENSMUST00000071026,ENSMUST00000070996,ENSMUST00000043419,ENSMUST00000108612,ENSMUST00000108611,ENSMUST00000108610,ENSMUST00000108613,ENSMUST00000108609,ENSMUST00000108608,ENSMUST00000108607 2 10 10 162 11 69731420 69731439 ATCAAACGGAATGACTTCCA 59 69730994 69731107 GCACTGTGATCAGGATCTC 59 NA Mus musculus 50 Etohi1 ENSMUSG00000078889 ENSMUST00000109022,ENSMUST00000109023 1 2 9 93 2 175791874 175791893 CCTATAGGAATCTCACAGCT 57 175788369 175791613 GTGAAGACTCTTCCATGAC 57 NA Nonspecific Mus musculus 50 Mpa2l ENSMUSG00000079362 ENSMUST00000100960,ENSMUST00000050011 2 2 2 60 5 105706747 105706765 TTATGCCAAGATCAAGACC 57 105705916 105706724 AATCCCTAGTCTATTCCCAG 57 NA DesignRelaxed Mus musculus 50 ENSMUSG00000068790 ENSMUSG00000079369 ENSMUST00000112738,ENSMUST00000112737 1 2 3 80 14 6733655 6733673 GAGAAGGAAGAGGGAATCC 58 6732861 6733613 AGTATTTCTAGCAGACCTGTG 59 NA Nonspecific Mus musculus 50 NP_001034329.1 ENSMUSG00000079583 ENSMUST00000114687 1 1 1 69 X 57693285 57693303 TTGTATGGTTGAGGAGGTC 58 57690229 57690248 CCAGGATGAAATAGCTTCCA 59 NA DesignNoJunction, InUTR Mus musculus 50 mmu-mir-141 ENSMUSG00000065474 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-138-2 ENSMUSG00000065512 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-375 ENSMUSG00000065616 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 2900097C17Rik ENSMUSG00000067833 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 TRAJ17 ENSMUSG00000076912 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-105 ENSMUSG00000077847 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Npepps ENSMUSG00000001441 ENSMUST00000001480,ENSMUST00000107608 1 2 2 118 11 97068567 97073596 AAGGCTTTCTTCGAGAGTC 59 97068467 97068485 TACTGGTGAATGCTGTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tubb6 ENSMUSG00000001473 ENSMUST00000001513 2 1 1 113 18 67550986 67551004 AAGTGATCAGTGATGAGCA 58 67551078 67552611 CGTACTTCTTAGAGGATGACTC 59 NA Mus musculus 50 2810003C17Rik ENSMUSG00000001864 ENSMUST00000001920 2 1 1 81 2 31820624 31825159 GCGAGATTGATCTGATGTC 58 31825202 31825222 ATCATCTTCTTCATCTCCAGG 58 NA Mus musculus 50 Vsig2 ENSMUSG00000001943 ENSMUST00000002008,ENSMUST00000115024 3 2 3 162 9 37349062 37349949 TGGTTCAAGATGAAGTGTC 57 37350189 37350207 ATAAGAGTCCCAGCTACTC 57 NA Mus musculus 50 Sult2b1 ENSMUSG00000003271 ENSMUST00000075571,ENSMUST00000107735 2 2 2 95 7 52989472 52990512 AGGCTAAGGTGATTTACGTG 59 52989396 52989415 TACCAGGGTCCTTTAATTGC 59 NA Mus musculus 50 Dusp3 ENSMUSG00000003518 ENSMUST00000107172,ENSMUST00000107173,ENSMUST00000003612 3 3 3 102 11 101842949 101842968 CACAGATTTCATTGACCAGG 58 101836189 101836207 GAGGTAGGCGATAACTAGC 59 NA DesignNoJunction Mus musculus 50 Gab2 ENSMUSG00000004508 ENSMUST00000004622 3 1 1 180 7 104447814 104447832 AGCAAAGACCTCCAATCAG 59 104448872 104449891 GTCTTTCCTGGAGGTTCAG 59 NA Mus musculus 50 E130112L23Rik ENSMUSG00000004562 ENSMUST00000093813,ENSMUST00000089769 2 2 2 61 14 52619706 52620537 GCTGTGAGATAGATCTAAAGGA 58 52620559 52620577 GATGACAGTGAAAGGGTCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ghrhr ENSMUSG00000004654 ENSMUST00000063578 3 1 1 84 6 55335443 55335461 ATCTTCAACTTCCTGCCTG 59 55335509 55336815 CAATGAAGCCCTGAAAGGA 59 NA Mus musculus 50 Ezh1 ENSMUSG00000006920 ENSMUST00000100417,ENSMUST00000107285,ENSMUST00000107284 3 3 4 82 11 101078434 101078571 AATATGGGAGCAAAGGCTC 59 101078370 101078390 TTCTTCCACTCTTCATTGAGG 59 NA Mus musculus 50 Casq1 ENSMUSG00000007122 ENSMUST00000003554 1 1 1 83 1 174146979 174146998 TGTTCAAAGGAGATGAAGTC 57 174146142 174146933 CTTCTAGGACATCAAGCAG 57 NA Mus musculus 50 Tcap ENSMUSG00000007877 ENSMUST00000008021 2 1 1 63 11 98245185 98245203 CAAGTGTCTGAGGAGAACC 59 98245230 98245248 GAGTCAGGTCTTTCCACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hmgcll1 ENSMUSG00000007908 ENSMUST00000008052 1 1 1 109 9 75932285 75978123 TAACAGCTCTTCAGATGGG 58 75978196 75978214 TATCAAATCCTCAGTGGCT 57 NA Mus musculus 50 Man1a2 ENSMUSG00000008763 ENSMUST00000008907,ENSMUST00000090730 3 2 2 82 3 100451023 100456469 CATATTCGGAAGCTCACAG 57 100450959 100450977 TGAATTCATCATGAAGCCC 57 NA Mus musculus 50 Bmp7 ENSMUSG00000008999 ENSMUST00000009143 1 1 1 86 2 172698431 172698449 ACTACTGTGAGGGAGAGTG 59 172695778 172698381 TGAAGTGAACCAGTGTCTG 59 NA Mus musculus 50 Fvt1 ENSMUSG00000009905 ENSMUST00000010049 1 1 1 80 1 108644152 108644357 CATAAAGCAGGCACAAGAG 58 108644090 108644111 TCAAACTTTCCTGACATAGAGG 59 NA Mus musculus 50 Taz ENSMUSG00000009995 ENSMUST00000114182,ENSMUST00000069722,ENSMUST00000077311 3 3 4 81 X 71533368 71533386 CTACCAGAAAGGGATGGAC 59 71533430 71533527 GTTTACTTTCCCTTCTGGGA 59 NA Mus musculus 50 Pabpc4 ENSMUSG00000011257 ENSMUST00000106243,ENSMUST00000106241,ENSMUST00000080178,ENSMUST00000078734,ENSMUST00000094192 1 5 6 85 4 122972251 122972270 CCATATTACACGCCTAACCA 59 122972318 122972457 ATTCCTTGGAAGCCTTGAG 59 NA Nonspecific Mus musculus 50 Zfp296 ENSMUSG00000011267 ENSMUST00000108453,ENSMUST00000011411 2 2 3 98 7 20163220 20163239 GGAAGATCTTTCCATTAGGG 57 20163300 20164970 CTTTGGATTCTGAGATGGG 57 NA Mus musculus 50 Thap8 ENSMUSG00000013928 ENSMUST00000014072 1 1 1 80 7 31065702 31074555 GTCTCATGGATATAGGGAACC 59 31074597 31074615 GAAACTTCCTGTCCAGGAG 59 NA Nonspecific Mus musculus 50 Gata2 ENSMUSG00000015053 ENSMUST00000015197 2 1 1 95 6 88154693 88155197 GCTGCACAATGTTAACAGG 59 88155255 88155274 CCTTTCTTGCTCTTCTTGGA 59 NA Mus musculus 50 Gata5 ENSMUSG00000015627 ENSMUST00000015771,ENSMUST00000108890 3 2 2 295 2 180067161 180068533 TCGTACCTGACTTCTTGGA 59 180063021 180063039 CTTCATGTAGAGGCCACAG 59 NA DesignNoJunction Mus musculus 50 Setdb1 ENSMUSG00000015697 ENSMUST00000015841,ENSMUST00000107170,ENSMUST00000107171 3 3 3 81 3 95145309 95145328 AGTATGAAGACATCCTCAGC 58 95144226 95145265 TCACAGCACCCATATTAGG 58 NA Mus musculus 50 Eps8 ENSMUSG00000015766 ENSMUST00000058210,ENSMUST00000111880,ENSMUST00000100841,ENSMUST00000111878 2 4 4 80 6 137462851 137462870 AAGTTGAAGTCCCATATCCA 58 137460810 137462809 CTGGACCACCATATTTAGTG 57 NA Mus musculus 50 Sulf1 ENSMUSG00000016918 ENSMUST00000088585,ENSMUST00000066698 2 2 2 80 1 12830510 12830529 GAATTTAAGGGAAGTGAGGG 57 12830571 12831535 TTGTTGTAATAGCTCTGGTC 57 NA Mus musculus 50 Slc35c2 ENSMUSG00000017664 ENSMUST00000109300,ENSMUST00000109299,ENSMUST00000109298,ENSMUST00000017808,ENSMUST00000109295 1 5 5 132 2 165103070 165103748 TCTTTAAGGAAGTCTGCACC 59 165102957 165102975 GAATGTAGAGCCTTGAGGG 59 NA Mus musculus 50 Stk4 ENSMUSG00000018209 ENSMUST00000109382,ENSMUST00000018353,ENSMUST00000088291 2 3 3 81 2 163943791 163943809 GGCAAGAATGTATCTGGCT 59 163943851 163977418 AGCTCTTGAGAAACTCATAGTC 59 NA Mus musculus 50 Gabarap ENSMUSG00000018567 ENSMUST00000018711,ENSMUST00000108592 3 2 2 100 11 69805887 69805905 CAAAGCTCGGATAGGAGAC 59 69806200 69807977 TCTTCTTCATGGTGTTCCTG 59 NA Mus musculus 50 Lhx1 ENSMUSG00000018698 ENSMUST00000018842,ENSMUST00000108082 1 2 3 147 11 84333901 84333920 GAAGGATGAAACAGCTAAGC 58 84333418 84333791 TCACTCTGGTAATCTCCGT 59 NA InUTR Mus musculus 50 Mfsd3 ENSMUSG00000019080 ENSMUST00000019224 1 1 1 60 15 76533567 76533585 TCACTGTGATGATGCACTG 59 76533609 76533706 CTGTAATGTGTAGCCTGCA 59 NA DesignRelaxed Mus musculus 50 Zfp687 ENSMUSG00000019338 ENSMUST00000019482,ENSMUST00000107244 2 2 2 108 3 94812409 94812521 AAGGAACATGGTAAGTCAGTG 59 94812321 94812339 TGATTCCCTCATGGTTGAC 59 NA Mus musculus 50 Tbc1d15 ENSMUSG00000020130 ENSMUST00000020339 2 1 1 80 10 114640281 114645963 GATTATGGGAGGTAATGTGGA 58 114640221 114640239 TTTCTGATTCCAGGATGGC 59 NA Mus musculus 50 Pcsk4 ENSMUSG00000020131 ENSMUST00000020340 2 1 1 92 10 79788816 79788915 AGTGGTACATGAACAAGGA 58 79788742 79788760 AGATGGAAATCACCACTCC 58 NA Mus musculus 50 Zpbp ENSMUSG00000020193 ENSMUST00000020413 2 1 1 81 11 11359748 11359766 ACTGCCAAGAAGTATCCAC 59 11318274 11359706 CATAACATATACGCTCACAGGA 59 NA Mus musculus 50 Theg ENSMUSG00000020317 ENSMUST00000020566,ENSMUST00000077433 1 2 2 91 10 79046544 79046562 AGTACCAAGCTTCTAACCG 58 79042832 79046489 GACTTGGGAAACCTCAGAC 59 NA Mus musculus 50 Npc1l1 ENSMUSG00000020447 ENSMUST00000004505 1 1 1 80 11 6121871 6121892 GAGCAAACCTCTACTTAATGTG 59 6118730 6121832 CTATCAGGTAGGAATCCTTGG 59 NA Mus musculus 50 Mfap3 ENSMUSG00000020522 ENSMUST00000108849,ENSMUST00000020830 1 2 2 122 11 57341747 57341765 AAGTCCACTGGTACAACTC 58 57343030 57343048 TACATGTATAGAGCCCACG 58 NA DesignNoJunction Mus musculus 50 Elac2 ENSMUSG00000020549 ENSMUST00000071891,ENSMUST00000108697,ENSMUST00000101049 2 3 3 80 11 64792814 64792833 GTCTTCTCGGAATACAACAG 57 64793261 64793418 GACTTTCAGTTTGTGTTCCT 58 NA Mus musculus 50 Mboat2 ENSMUSG00000020646 ENSMUST00000110942,ENSMUST00000020976,ENSMUST00000116439,ENSMUST00000078902 1 4 4 80 12 25640213 25640234 TCTACCCAGGATACTATCTGAC 59 25640272 25642456 GCCTAAAGTTATTTCTCACAGC 59 NA Mus musculus 50 Ddx5 ENSMUSG00000020719 ENSMUST00000106779 1 1 3 89 11 106648237 106648255 CAAGAACACCCTGATTTGG 58 106644704 106647821 AGAAGTTGGTCCTCTAACTG 58 NA Mus musculus 50 Xylt2 ENSMUSG00000020868 ENSMUST00000056286,ENSMUST00000116349 2 2 2 81 11 94530084 94530105 GTAGCATTCTTATCCAAGAACC 58 94529839 94530044 CTTGCTTCTTAATGAACCTGG 59 NA Mus musculus 50 1810020G14Rik ENSMUSG00000021139 ENSMUST00000110339,ENSMUST00000056161,ENSMUST00000019829 2 3 5 113 12 82611896 82611914 TATGTCTCCAACGACAGTG 59 82605612 82611819 ATCTTGGCCATTTACCGAG 59 NA Mus musculus 50 Rgs6 ENSMUSG00000021219 ENSMUST00000021642,ENSMUST00000101234 2 2 2 80 12 84164414 84164432 CTTAGCAAGACTCCAGAGG 59 84164476 84166949 CGGTCAATCTTCACTTGTG 58 NA Mus musculus 50 Mrp63 ENSMUSG00000021967 ENSMUST00000022538 3 1 1 63 14 58445610 58445628 GATACATTGCAGACCAGCT 59 58445655 58445673 ATCTTGAAGGGTTAGGACC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Mcpt2 ENSMUSG00000022226 ENSMUST00000015576 1 1 1 81 14 56662763 56663138 TCAATAGGACAAGGAGATTCTG 59 56663177 56663198 CCTTTGCTTCATAAGAAGATGC 59 NA Mus musculus 50 4930570C03Rik ENSMUSG00000022473 ENSMUST00000023111 3 1 1 135 15 97620494 97621028 GCATCAGAGTCTCAAAGAC 57 97621127 97621145 ACTAAGGATGCTGATGTCC 58 NA InUTR Mus musculus 50 Emp2 ENSMUSG00000022505 ENSMUST00000078357,ENSMUST00000065091 1 2 2 80 16 10288248 10292367 TACCATTGACAATGCCTGG 59 10288186 10288204 GTACAGTTTGTGCTGTTGG 59 NA Mus musculus 50 Fgf12 ENSMUSG00000022523 ENSMUST00000100024,ENSMUST00000069654 1 2 2 99 16 28398434 28398452 GACAAGGTTATTCAGCCAG 58 28373092 28398371 ATTGAAGAGGGTGTAGTCG 58 NA InUTR Mus musculus 50 Maf1 ENSMUSG00000022553 ENSMUST00000023212 2 1 1 83 15 76182912 76182930 GAGAACTCCAGCTTTGAGG 59 76182977 76183088 GTAGCTTTCAATCCTGCCA 59 NA Mus musculus 50 Pmm2 ENSMUSG00000022711 ENSMUST00000023396 2 1 1 81 16 8645474 8645493 ACGATTATGTGTTTCCAGAG 57 8645536 8646282 AGATGCCCTTGAATATTCTG 57 NA Mus musculus 50 Fyttd1 ENSMUSG00000022800 ENSMUST00000023489 3 1 1 83 16 32900726 32900744 ACTTCCACCACAAATGGAG 59 32900791 32902520 TCGTGGTTTCTGAGTTACC 59 NA Mus musculus 50 Donson ENSMUSG00000022960 ENSMUST00000023682 1 1 1 116 16 91681611 91682354 ATGCAAATGCTTAAGGCAC 59 91681513 91681533 CATAGAATGCAATGCATGAGG 59 NA Mus musculus 50 Smarcd1 ENSMUSG00000023018 ENSMUST00000023759 2 1 1 81 15 99538402 99539718 TCATGTCATCAGTGTGGAC 59 99539763 99539781 CTTCAGAGTGTCATCCACC 59 NA Mus musculus 50 Gps2 ENSMUSG00000023170 ENSMUST00000072581,ENSMUST00000116358,ENSMUST00000057884 3 3 3 94 11 69729602 69729706 CTTCTCGGACTCATCTTCTC 59 69729763 69729781 GTATCTGTACGGGAAGCTG 59 NA Mus musculus 50 Agpat4 ENSMUSG00000023827 ENSMUST00000024594 2 1 1 99 17 12409745 12411855 CATCTTCTGTATGGCCTCC 59 12411918 12411936 TTGTTTCCGTTTGTTGTCG 59 NA Mus musculus 50 Jmjd2b ENSMUSG00000024201 ENSMUST00000086835,ENSMUST00000025036 3 2 2 92 17 56535796 56535928 CTACAGCCAGTCAGTACAG 59 56535984 56536002 CACATCTCAGGGATCAGTG 59 NA Mus musculus 50 Slc23a1 ENSMUSG00000024354 ENSMUST00000025212 2 1 1 91 18 35781510 35781952 CTATCAACACAGGCATTCC 58 35781437 35781455 CAGTATGAAAGCAAGGCAC 59 NA Mus musculus 50 Pga5 ENSMUSG00000024738 ENSMUST00000025647 2 1 1 80 19 10746331 10746349 CTCCTACTACCATGGAGAG 57 10744154 10746287 ATGGAGATGCTATCCACAG 58 NA Mus musculus 50 Ctsw ENSMUSG00000024910 ENSMUST00000113670,ENSMUST00000025844 1 2 2 97 19 5466020 5466039 GTTGTCCAATAATGAGCAGG 58 5465718 5465810 CCTTCTGGTAATGCTGGAG 59 NA Mus musculus 50 Acsl5 ENSMUSG00000024981 ENSMUST00000043150 3 1 1 81 19 55362443 55363303 AAAGATTCAAGGAAGCCTG 57 55363348 55363366 GAATGTCAAGACTGGAGTG 57 NA Mus musculus 50 Tll2 ENSMUSG00000025013 ENSMUST00000025986 3 1 1 80 19 41214745 41234045 CAAGAAAGGATGGCAAGGA 59 41214683 41214701 GAGCAGAGAAGGTCTTAGC 59 NA Mus musculus 50 Sfxn2 ENSMUSG00000025036 ENSMUST00000026011 2 1 1 80 19 46657459 46660204 GTTCTACAGGACAATGCCT 59 46660248 46660266 CTGTTGGTGTAGTTGACCA 59 NA Mus musculus 50 Scd3 ENSMUSG00000025202 ENSMUST00000026220 3 1 1 104 19 44290086 44290104 GAACATCATTCTCATGGCC 58 44290172 44308728 ACATAGTAGACAAACGCGA 58 NA Mus musculus 50 Obfc2b ENSMUSG00000025374 ENSMUST00000026439 2 1 1 104 10 127845652 127845761 ACCAAAGGGTATGCTTCAG 59 127845429 127845450 GACTTCGGAATAAACCATACAG 58 NA Mus musculus 50 Slco3a1 ENSMUSG00000025790 ENSMUST00000098371,ENSMUST00000026897 1 2 2 94 7 81448008 81448028 TTCTGTCATCATCCTCATCAG 59 81429547 81442116 GGATGAAACCCAACAAACG 59 NA Mus musculus 50 BC004044 ENSMUSG00000025854 ENSMUST00000026972 3 1 1 95 5 139270984 139271003 TAGGATGATCAACATGACCA 58 139271061 139282176 AAACAGATGTTGTTGGCTG 58 NA Mus musculus 50 Serpinb11 ENSMUSG00000026327 ENSMUST00000027566 1 1 1 80 1 109267413 109268736 AAATTCTTCTGAGTGCAGC 58 109268778 109268798 GAGTTCTGTTGGTTAATGTGG 59 NA Mus musculus 50 Sctr ENSMUSG00000026387 ENSMUST00000072886 2 1 1 87 1 121953066 121953084 TGTTCTTTGAATTGGCCCT 59 121958508 121959708 TTCTGAACTTCCAGCTCAC 59 NA Mus musculus 50 Arl8a ENSMUSG00000026426 ENSMUST00000027684 3 1 1 103 1 137051029 137051047 TGAGAAGGAGCTAATCGAG 58 137051351 137051807 GGGTGATGTCTATGTTGTC 57 NA Mus musculus 50 Iars2 ENSMUSG00000026618 ENSMUST00000027921,ENSMUST00000110975,ENSMUST00000110974 2 3 3 81 1 187147595 187147614 TGCTATTACACATTTGACCC 57 187147102 187147551 GATAAACCAAGCCCTTCTC 57 NA Mus musculus 50 Tsc1 ENSMUSG00000026812 ENSMUST00000028155,ENSMUST00000113869,ENSMUST00000113870,ENSMUST00000113868,ENSMUST00000113867 3 5 5 95 2 28537468 28537486 TTCTTGAATAGGCAGCTCC 59 28537545 28541251 TTCTACTTCCTTGGTGGTG 58 NA Mus musculus 50 Frzb ENSMUSG00000027004 ENSMUST00000028389 2 1 1 80 2 80253625 80258063 GTAAGAAAGTCAAGCGCTG 59 80253563 80253581 GATTCTGAGTGGAATCGCT 59 NA Mus musculus 50 Stk39 ENSMUSG00000027030 ENSMUST00000102715 1 1 1 80 2 68236524 68236545 GACTTATTACACCTCCTTTGTG 58 68230294 68236484 ATATCCAACATGGAACCTCC 59 NA Mus musculus 50 Trim44 ENSMUSG00000027189 ENSMUST00000102573 2 1 2 81 2 102197802 102221029 GACCCTAAAGTAACTCGAGAC 59 102197741 102197762 CCTCATCAGCAATAACTTTCTG 59 NA Mus musculus 50 Prei4 ENSMUSG00000027346 ENSMUST00000063729,ENSMUST00000028822,ENSMUST00000060955,ENSMUST00000110136,ENSMUST00000110137,ENSMUST00000110142 1 6 7 80 2 132366030 132366049 TAACATTTGACCAACTCCAG 57 132363868 132365642 CATACAAAGATTGTTTCCGG 57 NA Mus musculus 50 Raly ENSMUSG00000027593 ENSMUST00000029120,ENSMUST00000116389 3 2 4 112 2 154685437 154685455 AAGCCTAATAGACCCAAGG 58 154685691 154687590 CGATAATCAAACAGCCTGG 58 NA Mus musculus 50 Ggtl3 ENSMUSG00000027603 ENSMUST00000029131 1 1 1 85 2 155319403 155319421 GAACAGGAACCTGAGTGAC 59 155316844 155319354 TGAACTCACTGTCAACCTG 59 NA Mus musculus 50 Mmp24 ENSMUSG00000027612 ENSMUST00000029141 2 1 1 83 2 155636210 155637958 GTTTGTGTTCAAGGATCGC 59 155638005 155638023 CAGAACTGTTCGATCTGCA 59 NA Mus musculus 50 Sla2 ENSMUSG00000027636 ENSMUST00000029164,ENSMUST00000109561 1 2 2 80 2 156705674 156709335 CATGCAACCAGAAAGACAC 59 156705612 156705630 CTCAGAGATAGTCTGGCCT 59 NA Mus musculus 50 Dkk2 ENSMUSG00000028031 ENSMUST00000029665 2 1 1 91 3 131836890 131837944 GCAATAATGGAATCTGCATCC 59 131837997 131838015 ATGGTTGCGATCTCTATGC 59 NA Mus musculus 50 Fubp1 ENSMUSG00000028034 ENSMUST00000079497,ENSMUST00000106121 2 2 2 80 3 151882984 151883106 TACAAAGTTCAGCAAGCCA 59 151883149 151883168 ATACTCATTCCGCACTTCTC 59 NA Mus musculus 50 Casp8ap2 ENSMUSG00000028282 ENSMUST00000108177,ENSMUST00000029950,ENSMUST00000108178 3 3 3 96 4 32711123 32711141 TTGTTTGATGTCTGTCCTG 57 32717212 32718049 CAGTACTGTCAGAAACAGC 58 NA Mus musculus 50 1700009N14Rik ENSMUSG00000028287 ENSMUST00000029955 1 1 1 60 4 39398221 39398239 GAAGGCGAAGTCTATTGTC 57 39398261 39398281 GGCTGAAATGTCGTAATACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rgp1 ENSMUSG00000028468 ENSMUST00000107886,ENSMUST00000030190 1 2 2 91 4 43593418 43593436 ACAAATTGACCATTGGCTG 58 43593491 43593746 ATCTTGAAGACCAGTCAGC 59 NA Mus musculus 50 2310026E23Rik ENSMUSG00000028545 ENSMUST00000030274,ENSMUST00000106583 2 2 2 60 4 111103743 111105779 TAGACACATCAAGAGACCG 58 111105803 111105821 CTCGATACTCTTGTGAGCC 59 NA DesignRelaxed Mus musculus 50 Ppie ENSMUSG00000028651 ENSMUST00000030404 2 1 1 92 4 122812898 122812916 AATCTGAGCTCTTTGGACG 59 122812384 122812842 CATCATCTGACCAGACTGG 59 NA Mus musculus 50 Pef1 ENSMUSG00000028779 ENSMUST00000030563 2 1 1 93 4 129798671 129802310 GACATTATGGACAGGGTGG 59 129802365 129802385 GAGATATAGCCACTGTGATCG 59 NA Mus musculus 50 Ccdc28b ENSMUSG00000028795 ENSMUST00000030586,ENSMUST00000106035 2 2 2 81 4 129298278 129298296 TTTATGAGATGGAGGGAGG 57 129298108 129298233 GAACATTCCTTCCCAAAGG 58 NA Mus musculus 50 Nppb ENSMUSG00000029019 ENSMUST00000103231 1 1 1 80 4 147360563 147360581 TATCTCAAGCTGCTTTGGG 59 147360625 147361086 TACAACAACTTCAGTGCGT 59 NA Mus musculus 50 Tprgl ENSMUSG00000029030 ENSMUST00000030896,ENSMUST00000105639 1 2 2 112 4 153533460 153533478 TCATCAACAGATGGAACCC 59 153532663 153533384 GAAGCTTTCCAAATGGCAC 59 NA Mus musculus 50 Prkcz ENSMUSG00000029053 ENSMUST00000030922,ENSMUST00000103178 2 2 3 297 4 154664661 154667282 GAAGAAACTGATGGAATTGC 57 154660947 154660965 GCTCAAACACATGTTTCTC 57 NA DesignRelaxed Mus musculus 50 Sdf4 ENSMUSG00000029076 ENSMUST00000097734 3 1 4 82 4 155374878 155376585 AAGTGGATGAGGAGATTGC 59 155376630 155376649 GCATATACTGGTCTCACCAG 59 NA Mus musculus 50 Htra3 ENSMUSG00000029096 ENSMUST00000087629,ENSMUST00000101286 1 2 3 121 5 35998236 36006624 AAGCATGTGAAAGACTGGA 59 35996756 35996774 TATATTCCACTGCTGACCG 58 NA Mus musculus 50 Olfr109 ENSMUSG00000029184 ENSMUST00000031086 2 1 1 60 17 37603750 37603768 GTCACAGGCAGTATATCCA 58 37603789 37603810 TGATGTAGAAATAGGAGAGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Slc34a2 ENSMUSG00000029188 ENSMUST00000094787 3 1 1 82 5 53456786 53456804 ATATTGCTGGACTGATGGC 59 53456849 53458817 AGATGTGCTGACATTTAGCA 59 NA Mus musculus 50 Ugt2a2 ENSMUSG00000029268 ENSMUST00000031197,ENSMUST00000079811 3 2 2 82 5 87891150 87891923 GATCTTCTTGGACATCCCA 58 87891086 87891104 ATCCCATGGTAAATAGCCT 57 NA Mus musculus 50 Shroom3 ENSMUSG00000029381 ENSMUST00000113055,ENSMUST00000113054,ENSMUST00000113051 3 3 3 124 5 93391379 93393390 AAGAGGAAAGGAGTTCTCTG 58 93393477 93393495 GTAGTTGGCCAGGATATCC 59 NA Mus musculus 50 Gatc ENSMUSG00000029536 ENSMUST00000031510 3 1 1 102 5 115785544 115785562 CTGACAATGTTGCAGAAGG 59 115784588 115785479 GGCAAGGAAATATTACCTGG 58 NA Mus musculus 50 Rpo1-3 ENSMUSG00000029642 ENSMUST00000110557 1 1 2 81 5 147912814 147912833 AGAGGAATTGCTAAAGGAGG 59 147912877 147922239 AAGAGGACACTTCATCCAG 58 NA Nonspecific Mus musculus 50 Asb7 ENSMUSG00000030509 ENSMUST00000068980 3 1 2 124 7 73824059 73824077 TTGGAACAAGGCTATTCCC 59 73823119 73823972 ACAAAGTATACTCCTCCGTG 58 NA Mus musculus 50 Snrpa1 ENSMUSG00000030512 ENSMUST00000032723 2 1 1 80 7 73207148 73208662 ACAGAATTTGCCGTATAGGT 59 73208704 73208723 CTAGACTGTTGTTGGTGAGG 59 NA Mus musculus 50 Det1 ENSMUSG00000030610 ENSMUST00000032839 2 1 1 79 7 85979050 85979068 TCTCTTCAGCTACGATGAC 58 85972991 85979007 CATAGAACCTGATCGGGTG 59 NA DesignNoJunction Mus musculus 50 4631426J05Rik ENSMUSG00000030930 ENSMUST00000077472,ENSMUST00000080215 2 2 2 82 7 139454421 139454439 CTGACCCAAGACTTCATCC 59 139439695 139454375 GAGTACAACCTCTCCACAG 59 NA Mus musculus 50 Cask ENSMUSG00000031012 ENSMUST00000115435 3 1 9 131 X 13103832 13103850 TGACTTGTACAGATTTGCC 57 13099458 13103126 GCTGAAGAGATTCATCCTC 57 NA Mus musculus 50 Dock11 ENSMUSG00000031093 ENSMUST00000033419 2 1 3 93 X 33487315 33487333 TATGTTCTCAGAAGGGTGG 58 33487390 33500607 CTCTTGAACACCTTCATGG 58 NA Mus musculus 50 4930519F16Rik ENSMUSG00000031325 ENSMUST00000033688,ENSMUST00000061184,ENSMUST00000062544 3 3 3 82 X 100429602 100451175 GTCTGAAGAAATCGAAACCG 59 100429539 100429558 GCAGATTCTTTGACCATGTG 59 NA Mus musculus 50 Vegfc ENSMUSG00000031520 ENSMUST00000033919 2 1 1 92 8 55244754 55244772 GTGTCCGTCTACAGATGTG 59 55244828 55254387 TTCAAACAACGTCTTGCTG 59 NA Mus musculus 50 F11 ENSMUSG00000031645 ENSMUST00000034064 1 1 1 80 8 46334415 46334433 GCACACGCATTACAAAGAG 59 46334249 46334371 GATGGCAGAATACTGGGAC 59 NA Mus musculus 50 Ap1g1 ENSMUSG00000031731 ENSMUST00000093157,ENSMUST00000034171 3 2 2 82 8 112379560 112379578 TGATAACGATACAGGCCTC 58 112379623 112382707 CTGGAATGTCTTTGGTACTG 58 NA Mus musculus 50 Cmtm3 ENSMUSG00000031875 ENSMUST00000034343 1 1 1 67 8 106869227 106869245 ATGAAGTGGCCAAATTCCT 59 106869276 106870633 TTCTTCTGTCCTATGGGCT 59 NA DesignNoJunction Mus musculus 50 Adat1 ENSMUSG00000031949 ENSMUST00000034427,ENSMUST00000070921 3 2 2 102 8 114513816 114514119 AGAAGGAAGTGCAAGTGAC 59 114511759 114511777 CTGTCATTGAGGATGTCCC 59 NA Mus musculus 50 Usp28 ENSMUSG00000032267 ENSMUST00000047349 1 1 2 80 9 48808464 48808483 GATGCTGTTAAATCAGCTGC 59 48808525 48809623 CCATTACTGGCCTTTAATGC 59 NA Mus musculus 50 Ube2cbp ENSMUSG00000032415 ENSMUST00000034986 2 1 1 80 9 86318973 86320991 TTTCCTAACATACCAAGGTCTC 59 86318914 86318934 AGTACTTCTAGCAGAGGAGAG 59 NA Mus musculus 50 Cspg5 ENSMUSG00000032482 ENSMUST00000035058 3 1 1 80 9 110153582 110153600 TGATGACTGTGTTCTTTGC 58 110153644 110158659 TCCGGAATTTATTGGTCCT 58 NA Mus musculus 50 Gng11 ENSMUSG00000032766 ENSMUST00000031670 3 1 1 61 6 3954357 3954375 ACTGAAGATGGAGGTTGAG 58 3954399 3958041 TAGATACCTGTTGTCTCTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cntrob ENSMUSG00000032782 ENSMUST00000102603,ENSMUST00000092973,ENSMUST00000108663 3 3 3 116 11 69132963 69133369 ACTAGACAAGACTCTGGCT 59 69132865 69132883 TTGCTTCTGGTGAGTTCTG 59 NA Mus musculus 50 Fkbp1a ENSMUSG00000032966 ENSMUST00000044011,ENSMUST00000050712 2 2 5 126 2 151383143 151383162 AATTTGATTCCTCTCGGGAC 59 151385208 151385228 GAGATTATCAGTTTGGCTCTC 58 NA DesignNoJunction Mus musculus 50 Spg11 ENSMUSG00000033396 ENSMUST00000036450 2 1 1 80 2 121927430 121927448 ACTCCGTCTTCACAATCTC 59 121923979 121927389 CATCTCTTCTACCTGTCTTAGG 59 NA Mus musculus 50 MGI:1919786 ENSMUSG00000033450 ENSMUST00000036370 3 1 1 81 17 8119783 8119801 GATAAGCAGTCTCGATGGT 58 8119934 8120240 GATATCACCCTCTGACTGAC 58 NA Nonspecific Mus musculus 50 Rbm9 ENSMUSG00000033565 ENSMUST00000063150,ENSMUST00000048145,ENSMUST00000089470,ENSMUST00000109780,ENSMUST00000096360 2 5 5 89 15 76929755 76929879 GTTATATGCAGCATCCAGC 58 76929684 76929702 TAAGTGTTGATGCCTCCTC 58 NA Mus musculus 50 Dysf ENSMUSG00000033788 ENSMUST00000113821,ENSMUST00000113823,ENSMUST00000113818,ENSMUST00000089595,ENSMUST00000081904 1 5 5 80 6 84022739 84023859 AGGACTTACCACAGATGGA 59 84023902 84023921 CCAAGTTCTTCTTGTTGCTG 59 NA Mus musculus 50 Tmem87a ENSMUSG00000033808 ENSMUST00000090046,ENSMUST00000090042,ENSMUST00000043847,ENSMUST00000110729 1 4 4 80 2 120197304 120197324 GAGGAACATTGTAAAGCTCTC 58 120196222 120197262 ATGAACACAATAGACGCTG 57 NA Mus musculus 50 Parl ENSMUSG00000033918 ENSMUST00000048642 3 1 1 85 16 20287984 20288002 GTCTTCTGCTTGTGGAGAG 59 20287130 20287936 GAACAAAGAACCTTGGATGC 59 NA Mus musculus 50 Slc25a37 ENSMUSG00000034248 ENSMUST00000111071 2 1 2 65 14 69902806 69902824 GAGCACTCCATCATGTACC 59 69683112 69683130 TCTCAATGGTAGACTGGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Brip1 ENSMUSG00000034329 ENSMUST00000044423,ENSMUST00000100673,ENSMUST00000064301 3 3 3 88 11 86011463 86012375 CTATTGTCAGAGGACTAAACAG 57 86011396 86011414 TGCAGAACAAAGTAAGGCT 59 NA DesignNoJunction Mus musculus 50 Dynlrb2 ENSMUSG00000034467 ENSMUST00000078170 3 1 1 97 8 119038785 119038803 CAGTCAGGGATATTGACCC 59 119038861 119039596 CAGAAGATATTCCTTATCTGGG 57 NA DesignRelaxed Mus musculus 50 Edil3 ENSMUSG00000034488 ENSMUST00000081769,ENSMUST00000043111 2 2 2 80 13 89316898 89319851 AAGAGATGGTCTTTCGTGG 59 89319894 89319913 CATACTGAGCTTTGATTGGG 58 NA Mus musculus 50 Bai1 ENSMUSG00000034730 ENSMUST00000042035,ENSMUST00000089710 2 2 3 169 15 74411106 74411124 TGTCTTTGACTCACTGGAG 58 74413412 74414820 TCTCAAAGTCGGTCATGAG 59 NA Mus musculus 50 Glt25d1 ENSMUSG00000034807 ENSMUST00000047903 3 1 1 84 8 74136858 74136876 GAGCATGTCATGAAACTGC 59 74136924 74141464 TGTCGATGTCCATGAACAG 59 NA Mus musculus 50 Gipc3 ENSMUSG00000034872 ENSMUST00000045102 1 1 1 89 10 80804100 80804243 TCATCAAGAGAATCAAGGAAGG 59 80804032 80804050 TAGAGTGGTCATTGATGGC 59 NA Mus musculus 50 Epgn ENSMUSG00000035020 ENSMUST00000041516 2 1 1 81 5 91460183 91460204 GGAAGACCATAATAGTTACTGC 58 91460245 91461242 AGTAAAGCATCTGCAAATGG 58 NA Mus musculus 50 Prickle1 ENSMUSG00000036158 ENSMUST00000048982,ENSMUST00000109255 1 2 2 60 15 93342907 93342925 CTTGAAGAGTATGCATGGG 57 93341200 93342883 CGAAATAGAGCTGGATCTG 57 NA DesignRelaxed Mus musculus 50 P2ry14 ENSMUSG00000036381 ENSMUST00000065220 1 1 2 266 3 58934471 58934489 TTCATGTAAGGGAGTCCCT 59 58919895 58919913 TTTGTGATCAGGGTGTTCC 59 NA DesignNoJunction, InUTR Mus musculus 50 9530077C05Rik ENSMUSG00000036411 ENSMUST00000058868 1 1 2 80 9 22244341 22244359 ATGGAGTCCTTCAAATCCT 57 22244403 22248528 CTTCGTAAGATACCTTGCC 57 NA Mus musculus 50 Rap2b ENSMUSG00000036894 ENSMUST00000049064 1 1 1 72 3 61168988 61169006 TACAAAGTGGTGGTACTGG 58 61169042 61169060 AGGAACCTGTTACGAACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Armc3 ENSMUSG00000037683 ENSMUST00000114640,ENSMUST00000049255 1 2 2 80 2 19214767 19217024 ATTACGGTCGGATAAATCCT 58 19217067 19217085 TAGCACGTTGATCATTCAG 57 NA Mus musculus 50 2810002N01Rik ENSMUSG00000037787 ENSMUST00000040519 1 1 1 141 12 112962573 112962591 CAAGACTACAAGCTAAGGG 57 112968314 112971886 TACCAGTCTCGGTTATAGC 57 NA Mus musculus 50 Cramp1l ENSMUSG00000038002 ENSMUST00000024982 1 1 2 78 17 25148343 25150622 ATCCTTGGCAGTTTCTCTG 59 25148283 25148303 TTCTCCATAAGTCACTCTTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 6230416J20Rik ENSMUSG00000038047 ENSMUST00000070607,ENSMUST00000102816 2 2 2 80 4 86250183 86251548 AGATTTCTGCTGAATGTGG 57 86250121 86250139 GAATAAACTTAGGGCCACC 57 NA Mus musculus 50 Rbm12 ENSMUSG00000038171 ENSMUST00000109604,ENSMUST00000059647 3 2 2 60 2 155921760 155921779 CATGTCTTCTTGACTGTAGG 57 155921719 155921737 CAGGGAAGTTAAATGGTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Fanci ENSMUSG00000039187 ENSMUST00000036865,ENSMUST00000036896 3 2 2 80 7 86556072 86556090 AATGCCTATGTCCCTTCAG 59 86556133 86557517 AAAGATCAAACACCTGTTCC 58 NA Mus musculus 50 Btbd12 ENSMUSG00000039738 ENSMUST00000040790 3 1 1 80 16 3995744 3995763 TCTTCTGTCAAATGTGTCAG 57 3994910 3995701 CATCTAGGCATCTGTTCAC 57 NA Mus musculus 50 Dtx4 ENSMUSG00000039982 ENSMUST00000045521 2 1 1 128 19 12556708 12557545 ACCAGAAGAGGATTGTACC 58 12556598 12556616 TAGATGTGGTAGATGTGGC 58 NA Mus musculus 50 Ifi203 ENSMUSG00000039997 ENSMUST00000081216 3 1 2 136 1 175854184 175854202 GTTTATGGACGACTCACCA 59 175852722 175854084 CCTTCATTGATGACCTGCA 59 NA DesignRelaxed Mus musculus 50 Cacna2d1 ENSMUSG00000040118 ENSMUST00000039370,ENSMUST00000115281,ENSMUST00000078272 1 3 3 80 5 15871278 15871618 AACAGACTTCTGATGGTCC 58 15871661 15871680 TATCAAAGCAGACATCAGGT 58 NA Mus musculus 50 1700034J05Rik ENSMUSG00000040163 ENSMUST00000036592 3 1 2 105 6 146901485 146901504 TGTTTGTCAAGACTTGTCCA 59 146901014 146901417 TATCTCCTGCACAACTTCG 59 NA Mus musculus 50 Cacng5 ENSMUSG00000040373 ENSMUST00000106742,ENSMUST00000039071 3 2 2 77 11 107742913 107742932 GGCATCTTCTTTATCCTCTC 57 107739299 107739317 CATCTCGTCATTGATGCTG 58 NA DesignNoJunction Mus musculus 50 Cbln3 ENSMUSG00000040380 ENSMUST00000063871 2 1 1 142 14 56502409 56502752 CCAGGTACTGGTCAATGAG 59 56501996 56502014 TGTTCAGCATCAGACTCAC 59 NA DesignNoJunction Mus musculus 50 Sh3pxd2b ENSMUSG00000040711 ENSMUST00000038753,ENSMUST00000109378 2 2 2 84 11 32271584 32281437 TTCTTTGACCTCCAGATGC 59 32281484 32281503 GAAATGGAATGATCCTCTGC 58 NA Mus musculus 50 Hesx1 ENSMUSG00000040726 ENSMUST00000035433 1 1 1 99 14 27815098 27815202 AGAATCCAGATTTGGTTCCA 58 27815264 27815282 GAAGATCTGGGTTGAAGGG 59 NA Mus musculus 50 Pnmal1 ENSMUSG00000041141 ENSMUST00000038163 1 1 1 123 7 17546733 17546751 TTCTGAAGAAAGGGCTTGG 59 17546837 17547378 TTCCTGGAATCTTTGGAGAC 59 NA Mus musculus 50 Arhgap12 ENSMUSG00000041225 ENSMUST00000062584,ENSMUST00000077128 3 2 2 82 18 6039449 6049288 GTAGTACAAGCTGGTTTGG 58 6039385 6039404 TGATGCCATTTCAATCACTG 58 NA Mus musculus 50 Agrn ENSMUSG00000041936 ENSMUST00000084089 1 1 6 102 4 155541612 155542669 CAATGAGATCCCAGCTGAG 59 155541528 155541546 TCCAACCTTTCCAATCCAC 59 NA Mus musculus 50 Tlk1 ENSMUSG00000041997 ENSMUST00000038584 2 1 1 80 2 70559174 70559193 GGATGACGATAGTTACGGTG 59 70555933 70559133 CACTCAGGAGGTAAATACCAG 59 NA Mus musculus 50 Agps ENSMUSG00000042410 ENSMUST00000111952,ENSMUST00000047232,ENSMUST00000111951 1 3 3 80 2 75706456 75715533 TTATGGGATCTGAAGGAACTC 58 75715575 75715593 CGTACTTCTGGTACTCAGG 58 NA Mus musculus 50 2410015N17Rik ENSMUSG00000042462 ENSMUST00000035276 2 1 1 156 7 134404054 134404072 GTTCAGATTCAGTCCGGAG 59 134400841 134402881 CTTCCACTGGAAGAGTTCTG 59 NA Mus musculus 50 Abcb4 ENSMUSG00000042476 ENSMUST00000003717,ENSMUST00000101612 3 2 2 82 5 8896619 8899578 TTGACACTGTTCCGATACTC 59 8899623 8899641 CCTGATCCATGAGCTATGG 59 NA Mus musculus 50 NM_001112661.1 ENSMUSG00000043469 ENSMUST00000060354 1 1 1 60 X 156022944 156022963 GAGGACACAATGAAGAATCC 58 156022903 156022922 TAAGTCCTTGTGAATCTGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 A430060F13Rik ENSMUSG00000043522 ENSMUST00000058450 3 1 1 153 11 94722808 94723023 ATTGAAGCACTTCTGTCCC 59 94722506 94722692 CTGAACAACCTGACTGTAGG 59 NA Mus musculus 50 Sorcs1 ENSMUSG00000043531 ENSMUST00000076049,ENSMUST00000072685,ENSMUST00000111756 1 3 3 80 19 50255939 50255959 TACTATCACAGTCCAAGTCTC 58 50250649 50255899 GACCGAAATTCCTCATATACC 57 NA Mus musculus 50 Olfr13 ENSMUSG00000043605 ENSMUST00000059512 2 1 1 60 6 43124631 43124652 CTCTTATGCATGTATCCTTGGT 59 43124672 43124691 TTTCCTTTGACCCTCTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Arf6 ENSMUSG00000044147 ENSMUST00000050063 3 1 1 74 12 70474031 70474049 TGATCTTCGTGGTAGACTG 58 70474087 70474105 CATTGATAATGCGGTGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1442 ENSMUSG00000044441 ENSMUST00000057924 2 1 1 60 19 12748962 12748980 TTGTCTCCTACAATGCCTG 59 12749004 12749022 TCTGTAGTGACAAAGGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 9930012K11Rik ENSMUSG00000044551 ENSMUST00000058240 2 1 1 81 14 70557040 70557058 CATCTTTGCAGGAGAACAG 58 70556598 70556995 ATTACCAACCTCCTTTGCT 58 NA Mus musculus 50 Cnrip1 ENSMUSG00000044629 ENSMUST00000058159 3 1 1 86 11 16954714 16954733 GCATCTATGACACAGAAGGT 59 16954782 16978418 TCCCAATGTCTGTGAAAGG 59 NA Mus musculus 50 A330102K23Rik ENSMUSG00000044647 ENSMUST00000112397,ENSMUST00000112395,ENSMUST00000053910,ENSMUST00000112394 1 4 4 82 2 65857783 65860035 TTAAGTGTCAGGTGGATCG 58 65860078 65860099 GAATTCAATTCTACCTGCTGTG 59 NA Mus musculus 50 Tnfrsf26 ENSMUSG00000045362 ENSMUST00000055723 1 1 1 116 7 150797701 150797719 TTGTGGTTATCATAGCTGC 57 150795951 150797524 ATAGCATAGTGGAGGAGAG 57 NA Mus musculus 50 Mtus1 ENSMUSG00000045636 ENSMUST00000059115,ENSMUST00000093534,ENSMUST00000051379,ENSMUST00000046161 3 4 5 81 8 42078978 42079911 CAATTTCAAGGCAACTTTCC 58 42078916 42078934 GACAGTCTCTTGTTGACCT 58 NA Mus musculus 50 Olfr609 ENSMUSG00000046396 ENSMUST00000055787 1 1 1 60 7 110640541 110640559 CTTCACTTTCTCACACCTC 57 110640499 110640517 TCTGCTTGGTCTTTATGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 5330437I02Rik ENSMUSG00000046610 ENSMUST00000056782,ENSMUST00000078293,ENSMUST00000115097 3 3 3 86 18 65885154 65885943 CTATCTTTGGATAATGTGCTCG 59 65885990 65886008 GAGATAGAATGGGCCACTC 59 NA Mus musculus 50 Prl7a2 ENSMUSG00000046899 ENSMUST00000006660 1 1 1 80 13 27756960 27757761 CTGCGCAAGACATATACAG 58 27754622 27754642 CTCCATGTCCTCAATAAAGTC 58 NA Mus musculus 50 Tmem164 ENSMUSG00000047045 ENSMUST00000112889,ENSMUST00000101198,ENSMUST00000087333,ENSMUST00000112896,ENSMUST00000112897 1 5 9 135 X 139240593 139240611 TACCTGCTTTGGAAAGGAG 59 139267142 139268743 AATTCACTTCGGTGACCAG 59 NA Mus musculus 50 A030001H23Rik ENSMUSG00000048766 ENSMUST00000068851 3 1 2 107 4 112442504 112445645 CATTCAAGGAATGTATGTGC 57 112442416 112442435 TTGCAAGTTAAACTCCTAGC 58 NA Mus musculus 50 Gm568 ENSMUSG00000048824 ENSMUST00000060283 1 1 1 61 4 47023599 47023617 AACTCTGGAACATCAGGTC 58 47021596 47023574 AGCTGGAAATAGCAATGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hoxb13 ENSMUSG00000049604 ENSMUST00000062709 2 1 1 64 11 96057347 96057365 GCATTCCCTATAGCAAGGG 59 96057393 96057411 GATAAACTTGTTGGCTGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Arhgap15 ENSMUSG00000049744 ENSMUST00000112824,ENSMUST00000055776,ENSMUST00000112822,ENSMUST00000112821 1 4 5 80 2 43746028 43919291 TGTCTTTCAGATCACAACAG 57 43919333 43919352 TGGAACCAATCCAATATGAG 57 NA Mus musculus 50 Ppp1r3d ENSMUSG00000049999 ENSMUST00000058678 1 1 1 70 2 178148131 178148149 ATAGCCTTACTTGTCGCAG 59 178148079 178148097 GAAGTGAATCCAGCTCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr866 ENSMUSG00000050803 ENSMUST00000062248 2 1 1 60 9 19832008 19832026 AATGTGATGGCTTATGACC 57 19831966 19831986 TAAGGACTGTGTAATGAAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC027344 ENSMUSG00000050855 ENSMUST00000108220,ENSMUST00000085792 1 2 3 83 7 30631544 30631562 ATCTGTTCTCCTTGTTGGA 58 30631259 30631500 AATCTATGTCTGGATAAGGTCC 58 NA Nonspecific Mus musculus 50 Rgs13 ENSMUSG00000051079 ENSMUST00000052375,ENSMUST00000111941 2 2 2 93 1 146014468 146018555 CCCTTCAAACCTTACTTTGG 58 145987984 145988002 TGCTGTGTACACTATTGGG 59 NA Mus musculus 50 Nyx ENSMUSG00000051228 ENSMUST00000050434 3 1 1 69 X 13064343 13064361 TTGAATGACAGCTTTCGGT 59 13064393 13064412 AAGAGGTGAAGAGAAACGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Wdfy4 ENSMUSG00000051506 ENSMUST00000061753 1 1 1 80 14 33803133 33831738 TTCAACCTAAGGAAACACCC 59 33802165 33802186 GTATTCAAAGTTGCTGATCTCC 59 NA Mus musculus 50 4930523C11Rik ENSMUSG00000051804 ENSMUST00000063317 1 1 1 60 12 114728544 114728564 CTTCATATGCGGTACTATGTC 58 114728584 114728604 GTCGAAATGGATCAGAATTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cx3cr1 ENSMUSG00000052336 ENSMUST00000064165 3 1 1 61 9 119960562 119960580 CTTTATCTACGCCTTTGCC 58 119960519 119960537 ACTTCCTATACAGGTGTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Adh6a ENSMUSG00000053054 ENSMUST00000106247 2 1 1 131 3 137976310 137981224 TGAATACCCTGGGAAAGAC 58 137981316 137985877 CTGACGAGATCATCTTAATACG 58 NA DesignRelaxed Mus musculus 50 2700023E23Rik ENSMUSG00000053656 ENSMUST00000066220 1 1 1 79 5 74489663 74489681 TGGAGTCACAAATGAACCA 59 74489724 74489742 ATCACTACCTAGCAATCGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc30a7 ENSMUSG00000054414 ENSMUST00000067485 3 1 1 87 3 115695900 115695918 TAGTACTGCCATATTGGCC 58 115693720 115695852 TGCTCTAACATACCCATAAGAG 59 NA Mus musculus 50 Gabra5 ENSMUSG00000055078 ENSMUST00000068456 1 1 1 82 7 64673732 64677120 CAGCACAGGTGAATATACG 57 64673668 64673686 GAAGGTAGGTCTGGATGAC 58 NA Mus musculus 50 OTTMUSG00000008584 ENSMUSG00000055198 ENSMUST00000068632 3 1 1 81 4 114517651 114517669 AAATGACATTGGTCAGCAC 58 114517712 114526952 GCCTTGTTTCATAGTTACCAG 58 NA InUTR Mus musculus 50 Ntrk2 ENSMUSG00000055254 ENSMUST00000078541,ENSMUST00000079828,ENSMUST00000109840,ENSMUST00000109839,ENSMUST00000109838 2 5 5 80 13 58962848 58962866 AGAACGAGTATGGGAAGGA 59 58962910 58973108 TTGGGTTTGTCTCGTAGTC 59 NA Mus musculus 50 Nap1l5 ENSMUSG00000055430 ENSMUST00000059539 2 1 1 89 6 58856781 58856799 GACTTTATGGAGAGCTTGC 58 58856710 58856728 CTTGGCCTCGATCTTATCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG277333 ENSMUSG00000055676 ENSMUST00000050581 2 1 1 60 1 182258186 182258204 ATTGACCTCGACTACATGG 58 182258144 182258163 CGTTGAATTTACTGTGGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr378 ENSMUSG00000055971 ENSMUST00000069790 3 1 1 60 11 73238849 73238870 CTATAGTTGTACTCCCTTTCCT 58 73238810 73238829 ATGGAGGAAACAATTCTTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000056023 ENSMUSG00000056023 ENSMUST00000069880 3 1 1 61 3 81726230 81726249 AGGACATATACTCATTCGCA 58 81726188 81726207 AATGAGCCAGCAATATTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 4930572J05Rik ENSMUSG00000056665 ENSMUST00000070923 2 1 1 61 15 74553933 74553951 CCTACAATGAGACCAGCAG 59 74553976 74553994 GTCCTTTCTGTCACTGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 A730085E03Rik ENSMUSG00000056717 ENSMUST00000071032 3 1 1 65 18 69358469 69358487 TATTGGGAAATCCTGTCCC 58 69358515 69358534 ATTTCTTTGCAGTGGTTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 5730455P16Rik ENSMUSG00000057181 ENSMUST00000103225 2 1 1 80 11 80189059 80189077 CATTGCTAAGCGTCTTTCC 59 80187708 80189016 TAACCTGGAATTCTCAGCTC 59 NA Mus musculus 50 4932411N23Rik ENSMUSG00000058670 ENSMUST00000081074 3 1 1 60 X 123349068 123349088 AAACAGACTGGTGGTATTGAG 59 123349028 123349047 CTAGCCTTTGGATGAGAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1507 ENSMUSG00000059887 ENSMUST00000073571 3 1 1 60 14 53110147 53110167 ACACTCCATATCTTTCACCTC 59 53110107 53110125 AAGCTCATTAGGACCACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr119 ENSMUSG00000059964 ENSMUST00000080483 2 1 1 60 17 37838397 37838418 GCATCTATTACTTACTTGAGGC 58 37838438 37838457 CCAAGAGTTTGTCCATTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 3110018I06Rik ENSMUSG00000060375 ENSMUST00000082269 2 1 1 77 12 108727108 108727126 CATCTCTTCTGTGTCTGCT 58 108727167 108727185 GCAAACGAGTGAAGAAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 V1rc8 ENSMUSG00000060687 ENSMUST00000072266 1 1 1 60 6 57928519 57928538 GTTATGGATGTATGACCCAG 57 57928478 57928498 GGGATAGACAGTCACTATGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gstp1 ENSMUSG00000060803 ENSMUST00000042898 3 1 1 81 19 4036737 4036757 GATGGATATGGTGAATGATGG 58 4035920 4036697 CTTACCATTCTCATAGTTGGTG 58 NA Nonspecific Mus musculus 50 Phf5a ENSMUSG00000061360 ENSMUST00000023117 1 1 1 102 15 81700837 81700855 CTATGGATCTTACCAGGGC 58 81696314 81700772 ACCATCTCTATCCTTCTCCT 58 NA Mus musculus 50 Orm2 ENSMUSG00000061540 ENSMUST00000075341 2 1 1 100 4 63024101 63024119 CTTCGAGAGTATCACACCA 58 63024389 63024961 ACTCCTCCTACATACTTGGA 58 NA Mus musculus 50 Cyp2d22 ENSMUSG00000061740 ENSMUST00000023083 2 1 1 85 15 82204479 82204739 CACGCTCTCAAGGTATAGTC 59 82204413 82204431 AAAGTGGTGCATGGTAGAC 59 NA Mus musculus 50 Opcml ENSMUSG00000062257 ENSMUST00000115243,ENSMUST00000073822 1 2 2 82 9 28482940 28620878 TCATAGTGCAAGTTCCTCC 58 28620924 28620942 ACATAACAGGGTCACACTG 59 NA Mus musculus 50 4930425F17Rik ENSMUSG00000062501 ENSMUST00000077150 3 1 1 141 2 131473899 131473917 GTTGTCATTACGGGAAAGG 58 131474021 131474040 CTATCACAACTTGTTGGGAG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Freq ENSMUSG00000062661 ENSMUST00000000199 2 1 1 84 2 31126146 31136193 GTACAGCAGTGGTACAAGG 59 31136240 31136259 ACTGCTTGTAGATCTTCTGG 59 NA Mus musculus 50 EG624855 ENSMUSG00000062687 ENSMUST00000076896 1 1 1 91 8 87695550 87695568 CATAGACAAGTTGGTCCCT 58 87695623 87695641 TATAGTGGACCCATCCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ica1 ENSMUSG00000062995 ENSMUST00000115520,ENSMUST00000038403 1 2 3 128 6 8606392 8608223 GGCAGTTAATTTCTTTGGAGG 59 8603521 8603634 GTTCATCTATGGGTCCTGAG 59 NA Mus musculus 50 Nmral1 ENSMUSG00000063445 ENSMUST00000074970 3 1 3 172 16 4713782 4713800 GAATGTCTGTGAGTGACCT 58 4712540 4713646 TTAATGAACAGGCTTGGCA 59 NA Mus musculus 50 NR_003968.1 ENSMUSG00000063754 ENSMUST00000075049 1 1 1 68 19 29078213 29078231 TTCCAAAGAGCTGAGACAG 59 29078163 29078181 ACCTGAACTTTGTCATCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-10a ENSMUSG00000065519 ENSMUST00000083585 1 1 1 82 11 96178506 96178527 GTAGATCCGAATTTGTGTAAGG 58 96178570 96178588 TGAGCGGAGTGTTTATGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001074893.1 ENSMUSG00000066279 ENSMUST00000084830 3 1 1 118 7 109262885 109263495 GATCATTGATATGGATGAACGG 59 109262788 109262806 GAATTGCATCCAAGTCACC 59 NA Mus musculus 50 Zfp810 ENSMUSG00000066829 ENSMUST00000086278 3 1 1 96 9 22084964 22084982 TGGTTGATACCATCCAGGA 59 22083714 22084904 TTCAGTTCTGCTTCAACCA 59 NA Mus musculus 50 Pex26 ENSMUSG00000067825 ENSMUST00000088561 3 1 1 189 6 121135780 121135798 GAAATGGATCGATGGAGAG 57 121137359 121137377 ATCCATAATCAGGAAGGCC 58 NA DesignNoJunction Mus musculus 50 5430413K10Rik ENSMUSG00000067998 ENSMUST00000088924 3 1 1 146 2 154093396 154093414 TAACAAAGAACGGAGAGCA 58 154093926 154095184 CTTCTTCCTTAGCCTCAGG 59 NA Mus musculus 50 EG236749 ENSMUSG00000068113 ENSMUST00000062738 3 1 1 60 X 23483882 23483901 GAAGATGAAGCAGTTTGTGG 59 23483922 23483942 TTTCACATTACCTACTCCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Macrod2 ENSMUSG00000068205 ENSMUST00000110062,ENSMUST00000110072,ENSMUST00000043836,ENSMUST00000110061 1 4 10 92 2 140226707 140244563 AAATGATGGATGCATCCCT 59 140244619 140244637 TTTCCATAACCGTCTCAGG 58 NA InUTR Mus musculus 50 Pdxp ENSMUSG00000068221 ENSMUST00000089378 3 1 1 74 15 78748649 78748667 ATCACAGAAGACTTCAGCG 59 78748705 78748723 AAAGAGTATGTCGGTCTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp72 ENSMUSG00000069184 ENSMUST00000091481 1 1 1 60 13 74512451 74512469 AAAGACAACAGTCTTGGGA 58 74510269 74512428 TTTGTTCCTGGGTATGTAGC 59 NA DesignNoJunction Mus musculus 50 Hist1h2bc ENSMUSG00000069303 ENSMUST00000110468 1 1 3 153 13 21926008 21927180 CAGCTCCAACATAGTTTGTG 59 21927718 21927736 AGAGTGAGTTCCAGGAGAG 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 OTTMUSG00000001044 ENSMUSG00000069785 ENSMUST00000092818 1 1 1 104 11 85660533 85661457 CACATAATAAAGACCACAGAGC 59 85660450 85660468 CAAGGCTTAGACCTGTTCC 59 NA Mus musculus 50 Ssbp4 ENSMUSG00000070003 ENSMUST00000049908 1 1 1 123 8 73122917 73123024 GTAACTCGATCCCGTACTC 58 73122647 73122665 ATATTCTCGCTGGAGTTGG 59 NA Mus musculus 50 NP_001074704.1 ENSMUSG00000070576 ENSMUST00000094463 3 1 1 148 5 111850893 111883643 CAACAAAGAAGCCCATGAC 59 111883754 111883773 AGATATCAGAGTGCAGAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lrrc8b ENSMUSG00000070639 ENSMUST00000112707 1 1 2 133 5 105905293 105908796 CCTTCATAATACCTCTCCTCTC 58 105908889 105908908 TGAGGGTGATGTAATACCAG 58 NA InUTR Mus musculus 50 Csn1s1 ENSMUSG00000070702 ENSMUST00000094641 3 1 1 80 5 88106654 88107074 TATCCACATATGGAACAGCC 59 88108054 88108074 CTGATCCACTACACTCATAGG 59 NA Mus musculus 50 EG244595 ENSMUSG00000071047 ENSMUST00000095211 2 1 1 90 8 95546364 95549105 CTATCACAGAGATGCTGGA 58 95546292 95546310 TATTACCGTCTTGGGTCTC 58 NA Mus musculus 50 Rpl23 ENSMUSG00000071415 ENSMUST00000103146 1 1 1 102 11 97639653 97639672 CGACAACGAAAGTCATATCG 59 97639470 97639588 TAGCAGAGCCTTTCATCTC 58 NA Nonspecific Mus musculus 50 1500011B03Rik ENSMUSG00000072694 ENSMUST00000061251 2 1 2 84 5 115263206 115263798 CAGAGCCTGGATTTATCGA 58 115263140 115263158 GGATCTGTATCTGCAGCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930522L14Rik ENSMUSG00000072762 ENSMUST00000112547 3 1 2 155 5 110168019 110168225 TGCTGTAGGCTACAATTGG 59 110166732 110166751 TGCATTCGGAAACTATTGTG 58 NA Mus musculus 50 ENSMUSG00000072769 ENSMUSG00000072769 ENSMUST00000100944 1 1 1 80 5 108801358 108801376 CTTACCCATTTCACTGCAG 58 108801420 108801552 GAAGTGTACAGTGCATGTC 58 NA InUTR Mus musculus 50 G530011O06Rik ENSMUSG00000072844 ENSMUST00000101072 3 1 1 64 X 166416465 166416484 TATCTCTTCAACCATGCCTG 59 166416420 166416438 CAGGAATGGCATGAAAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000017540 ENSMUSG00000073274 ENSMUST00000101675 3 1 1 251 X 18744048 18744197 GGAATGAAATGCAGATAACTCG 59 18735973 18735991 TGAATTCACATCCTTCCCA 58 NA DesignNoJunction, InUTR Mus musculus 50 Gm1614 ENSMUSG00000073600 ENSMUST00000097619 3 1 1 60 18 35813786 35813805 CTCATCAGGCTTACAAACAG 58 35813745 35813764 GTTCTATCAGGAGTCTCACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Wdfy1 ENSMUSG00000073643 ENSMUST00000113515,ENSMUST00000113514,ENSMUST00000113513,ENSMUST00000113512,ENSMUST00000097685 2 5 8 84 1 79702868 79702887 ATTTCCCATATGTCCATGGA 58 79702130 79702824 GAGTCATATCCCATATCTTCAC 57 NA Mus musculus 50 1190007F08Rik ENSMUSG00000073697 ENSMUST00000097764 2 1 1 92 4 153397554 153397806 GCTATAGGAGGATCTCCCA 59 153397480 153397499 TGAAGATGATCCAGAAGAGG 58 NA InUTR Mus musculus 50 Efcab7 ENSMUSG00000073791 ENSMUST00000097959,ENSMUST00000106994 3 2 2 60 4 99498167 99498186 CACTAACTGAACAGGAGGTG 59 99498206 99498227 TTGAAGATAGTTAAGTAGGCGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 6620401M08Rik ENSMUSG00000074093 ENSMUST00000098414 3 1 1 144 7 59259306 59259324 CAGAAAGAAGGCAGAAGGA 59 59255137 59258723 GACACCGTCCATCTAAGTC 59 NA InUTR Mus musculus 50 Ccdc61 ENSMUSG00000074358 ENSMUST00000098780 1 1 1 80 7 19476509 19476671 TATTAAAGAGTACAGCTCCGAC 59 19476450 19476468 ATGTATTCCTGCAAAGCCT 59 NA Mus musculus 50 Spc24 ENSMUSG00000074476 ENSMUST00000098942,ENSMUST00000115369 3 2 2 79 9 21561825 21562133 CTACGTCAGCTCATCACAG 59 21561764 21561782 TCATCTACATCCCTCTCCT 58 NA DesignNoJunction Mus musculus 50 EG633640 ENSMUSG00000074634 ENSMUST00000109199,ENSMUST00000099147 1 2 2 72 13 120281807 120283944 ATCCCTATCTTTACAGGCC 58 120283980 120283998 GATGGGTATCACAGTGGAG 59 NA DesignNoJunction Mus musculus 50 ENSMUSG00000074739 ENSMUSG00000074739 ENSMUST00000099266 2 1 1 76 2 148841810 148841828 TCACTGACGTTCTCTTCAC 59 148841752 148841770 GACCAACACCACATATGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG433481 ENSMUSG00000074758 ENSMUST00000099292 1 1 1 80 2 144000311 144000330 AAGATACCCAAGTGAGTCAG 58 144000127 144000268 ACCACAAACAGACAATCAG 57 NA Mus musculus 50 Pdzd7 ENSMUSG00000074818 ENSMUST00000038901 2 1 1 99 19 45103284 45103302 GAATGGTCGGATAGCTGAG 59 45102959 45103221 GATGCTAATGCCCAAAGAC 58 NA InUTR Mus musculus 50 Olfr32 ENSMUSG00000075066 ENSMUST00000111505 3 1 2 96 2 89979275 89979680 ATACGGGAAAGAAATGTGAC 57 89979198 89979216 GGTACACAGGAAGGAACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc58 ENSMUSG00000075229 ENSMUST00000099937 1 1 1 176 16 36085142 36085160 AACTGTATAGCCCAGACCT 59 36090036 36091928 ATTAAACACCTTCCAGCTCC 59 NA Mus musculus 50 Gm1322 ENSMUSG00000075314 ENSMUST00000100061 1 1 1 60 2 67022585 67022605 GAAATGAGAGCTATCCTGGAG 59 67022626 67022645 AAGTTGCTTTCCTTAAGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Scn2a1 ENSMUSG00000075318 ENSMUST00000112399 2 1 3 158 2 65519127 65520054 CTGGACAAAGAATGTGGAG 58 65520176 65520758 TCTGTCACATATGCAAAGG 57 NA Mus musculus 50 Muc19 ENSMUSG00000075464 ENSMUST00000100292 2 1 1 60 15 91736701 91736719 CAACCAGTAAAGCACAAGC 59 91736743 91736761 TTGAGAGCTGAGGTTTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sepx1 ENSMUSG00000075705 ENSMUST00000115262,ENSMUST00000101800 3 2 2 91 17 24877059 24877077 ACGAGTTCCTGAATGATGG 59 24877132 24878861 AGCTTCTTTGCCTTTAGGG 59 NA Mus musculus 50 Dio3 ENSMUSG00000075707 ENSMUST00000097228 2 1 1 60 12 111518025 111518043 TCATCTACATCGAGGAAGC 58 111518067 111518085 ACATAGGGTGAATCTGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sox19 ENSMUSG00000076431 ENSMUST00000067230,ENSMUST00000110326 3 2 2 68 13 29044561 29044579 CAAGATTCCGTTCATCCAG 58 29044511 29044529 TTGTAGTCAGGGTAGTCAG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 IGKV3-4 ENSMUSG00000076600 ENSMUST00000103401 1 1 1 76 6 70622088 70622106 CAATCTCCAGCTTCTTTGG 58 70622146 70622164 TAATCAACACTTTGGCTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGHE ENSMUSG00000076611 ENSMUST00000103413,ENSMUST00000103414,ENSMUST00000103415 1 3 3 126 12 114510234 114510334 GAGATGCCCAGATCATGAG 59 114510126 114510144 ATTCTTCTCGCTTTCCAGG 59 NA Mus musculus 50 IGHV9-3 ENSMUSG00000076664 ENSMUST00000103473 1 1 1 60 12 115379098 115379116 TACCTTCACAACCTATGGA 57 115379056 115379074 CCACTTTAAACCCTTTCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV9D-2 ENSMUSG00000076781 ENSMUST00000103591 1 1 1 76 14 53511890 53512002 GATACACTTTGTCCTGAGAG 57 53512041 53512059 CTCCTTCAGAGACAGTGAC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Eid1 ENSMUSG00000078135 ENSMUST00000104935 2 1 1 233 2 125499161 125499179 CTACGAGTTCCCTGAAGAG 58 125499376 125499394 ATGATCTCATCACAACCGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rnf148 ENSMUSG00000078179 ENSMUST00000104979 3 1 1 60 6 23604418 23604436 CGATCATCATTGAAGTGGG 58 23604376 23604396 AGAGACATAACATAGTGGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:1924110 ENSMUSG00000078199 ENSMUST00000104996 3 1 1 63 2 35834516 35834535 TTTATCCGTCCTGTCTTCTC 58 35834472 35834490 ATGCAGAAAGTGAAAGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 A2A9Z5_MOUSE ENSMUSG00000078706 ENSMUST00000107676 2 1 1 68 11 96125537 96125555 TATTGTATTTCCGGTCCCT 57 96125587 96125605 GGAAACTCGGAGATAAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Evi2a ENSMUSG00000078771 ENSMUST00000103236,ENSMUST00000052383 1 2 2 60 11 79340672 79340691 CCTCCTATTGCAATCTCCTG 59 79340631 79340649 TCCTTCTTCGTGCTTTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Etohi1 ENSMUSG00000078898 ENSMUST00000099015,ENSMUST00000109047 3 2 3 80 2 175206008 175206028 GATGCTTCTCAGAAGAGTCTC 59 175206068 175206294 TTCCCAACTGTAACCTATAGC 59 NA Nonspecific Mus musculus 50 Ifi47 ENSMUSG00000078920 ENSMUST00000109202 2 1 2 113 11 48900635 48908897 TTCTTGGATCTGAGCTTCC 58 48908974 48908992 TACTGAGGCAGAAACTCCT 59 NA InUTR Mus musculus 50 NP_001074740.1 ENSMUSG00000079258 ENSMUST00000111813 3 1 1 60 19 47218638 47218659 TAAGTTTCGGATGATCTTCCAG 59 47218599 47218617 GATGCCATTCATGAAGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000068790 ENSMUSG00000079375 ENSMUST00000090663,ENSMUST00000090661 1 2 2 80 14 5674600 5674618 GAGAAGGAAGAGGGAATCC 58 5674660 5675412 AGTATTTCTAGCAGACCTGTG 59 NA Nonspecific Mus musculus 50 D5Ertd577e ENSMUSG00000079423 ENSMUST00000113018 1 1 1 81 5 95949450 95950428 AGATACTAGGGTGCCTGAG 59 95950472 95950491 AAGGAATCCAAGTCTGTCTG 59 NA Nonspecific Mus musculus 50 A3KGA4_MOUSE ENSMUSG00000079428 ENSMUST00000113116 3 1 1 147 X 132759494 132759791 TATCCTGCGTTTGTACAGG 59 132759902 132759920 TGTCTGAAATTGCCTTCCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Ccdc112 ENSMUSG00000079668 ENSMUST00000115476 2 1 1 147 18 46445362 46447021 GCCAGGTTTCAAGAAAGAG 58 46443416 46443435 GCCTAGAAGGATCTCTACTG 58 NA DesignNoJunction Mus musculus 50 Ttll2 ENSMUSG00000079722 ENSMUST00000115747 1 1 1 60 17 7556627 7556645 CTGGAATCTGTACTGGAGG 58 7556585 7556606 GGGTTTGACATTGACATATTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Scpep1 ENSMUSG00000000278 ENSMUST00000100630 3 1 2 82 11 88805181 88808472 GAAATACTACCTGGACGGT 58 88805117 88805135 AAGTTCTACACTGATGCCA 58 NA Mus musculus 50 Pemt ENSMUSG00000000301 ENSMUST00000102693,ENSMUST00000102692,ENSMUST00000000310,ENSMUST00000093052,ENSMUST00000093053 3 5 5 89 11 59784367 59784694 ATATGAAGAGCCCTTCACTG 59 59784297 59784315 TCCAAAGATCCTTCATGGC 59 NA InUTR Mus musculus 50 Znf512b ENSMUSG00000000823 ENSMUST00000108789,ENSMUST00000000840,ENSMUST00000108791 2 3 3 90 2 181323006 181323115 GAAGTATGTCACAAGTTGCAG 59 181322936 181322954 CCATGGTGTGGTAGTTGAG 59 NA Mus musculus 50 Expi ENSMUSG00000000983 ENSMUST00000001009 3 1 1 117 11 83523404 83523422 CTTGTGATGAACGATGCAC 59 83524658 83524677 AAGATCCATCTTCCACATGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Acp5 ENSMUSG00000001348 ENSMUST00000069330,ENSMUST00000115315 2 2 2 89 9 21932178 21932196 CTTGTCAAGAACTTGCGAC 59 21931695 21932125 GTCCTGAAGATACTGCAGG 59 NA Mus musculus 50 Ndufb2 ENSMUSG00000002416 ENSMUST00000002490 1 1 1 75 6 39548304 39548322 GAAGAACTGGGAATCCCTC 59 39549391 39549409 GAAATGTCTCACCTTGCTC 58 NA DesignNoJunction, InUTR Mus musculus 50 Nat5 ENSMUSG00000002728 ENSMUST00000110000 2 1 2 61 2 145737451 145737469 GAGTATTTCATCGTCGCTG 58 145737492 145738141 GCTTTGCCCATAATATAACCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Atp8b3 ENSMUSG00000003341 ENSMUST00000020383 2 1 2 84 10 79984812 79984830 CCTATGTCCTCATGACCAG 58 79984633 79984765 TAGTCAGCAAACAGAAATGG 58 NA Mus musculus 50 Csnk1g2 ENSMUSG00000003345 ENSMUST00000019676 3 1 3 169 10 80100914 80100932 CCTCAGGTCTACTACTTCG 58 80101149 80101950 TAGTCAAACACGTAGTCCA 57 NA Mus musculus 50 Sgsh ENSMUSG00000005043 ENSMUST00000005173,ENSMUST00000100172 3 2 2 202 11 119214022 119214040 AGCCTTATCTTCCGTAACG 59 119211851 119212240 TTCTTCCCAATGATGCCTG 59 NA DesignRelaxed Mus musculus 50 Wbscr22 ENSMUSG00000005378 ENSMUST00000085984,ENSMUST00000071677,ENSMUST00000005512 3 3 3 82 5 135532247 135532724 CCAAAGCAAAGAAGTTCTACC 59 135531933 135531951 TGCATCCTGACTTTCAGTC 59 NA Mus musculus 50 Neurl ENSMUSG00000006435 ENSMUST00000111808,ENSMUST00000111807 1 2 2 198 19 47314520 47314844 AAGTCAGGCTGAAGATCAC 59 47315006 47315024 CAGAAGGCAATGATGTTGC 59 NA Mus musculus 50 Nelf ENSMUSG00000006476 ENSMUST00000116574 1 1 9 116 2 24911648 24912630 GAGTGTCTGATGATGTCCC 59 24913762 24913780 TGAATACCCTGAGAAACCG 58 NA Mus musculus 50 Clec3a ENSMUSG00000008874 ENSMUST00000009018 3 1 1 92 8 116946875 116946893 CTTGAAGGAGATGCAAGCT 59 116949400 116949418 TAATGCTTGAGGCCTTCTG 59 NA DesignNoJunction Mus musculus 50 4632411B12Rik ENSMUSG00000010453 ENSMUST00000010597 1 1 2 95 1 36405432 36405450 CAAGTCAGATTGGGACCTC 59 36402860 36405374 CTGATGAAATGGGAACTTGG 58 NA Mus musculus 50 Thg1l ENSMUSG00000011254 ENSMUST00000011398,ENSMUST00000109254,ENSMUST00000101318 2 3 3 81 11 45766395 45767565 AGAGCCAGTAAGTTCATGAC 59 45766333 45766351 GGTCCTCAAAGTAATCCCG 59 NA Mus musculus 50 Pgam1 ENSMUSG00000011752 ENSMUST00000011896 2 1 1 60 19 41990304 41990323 CGATCTTATGATGTCCCACC 59 41990346 41990364 TGATGTTGCTGTAGAAGGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Evi5 ENSMUSG00000011831 ENSMUST00000011975 1 1 3 84 5 108238745 108239316 TGATACAGGGACAAGTGAC 58 108238679 108238697 GTCTGTTGTTTGATGGTGG 58 NA Mus musculus 50 Tnpo3 ENSMUSG00000012535 ENSMUST00000115251,ENSMUST00000012679 1 2 2 80 6 29538093 29539043 GTCATTGTAACACAGCTGG 58 29538031 29538049 CAATGTTTGTACGCATCCT 58 NA Mus musculus 50 Cdh23 ENSMUSG00000012819 ENSMUST00000105462,ENSMUST00000105463,ENSMUST00000105461 1 3 5 95 10 59767641 59767659 GATGATGACAGATACCTGC 57 59766440 59767582 GTGGATCAGCTTAATAGGC 57 NA Mus musculus 50 Cdh23 ENSMUSG00000012819 ENSMUST00000105462,ENSMUST00000105463,ENSMUST00000105461 3 3 5 96 10 59767642 59767660 CGATGATGACAGATACCTG 57 59766440 59767582 GTGGATCAGCTTAATAGGC 57 NA Mus musculus 50 Anapc1 ENSMUSG00000014355 ENSMUST00000014499,ENSMUST00000110333 2 2 3 80 2 128505303 128505322 CCACTAAATATGGCTTGCTG 58 128504007 128505261 TAGGCAAAGGTTCTCTAGGT 59 NA Mus musculus 50 Tnr ENSMUSG00000015829 ENSMUST00000111669 2 1 2 80 1 161816387 161816405 TATCTCCATCACTGCTGAG 58 161816449 161818403 TTGGGAGGATCAATTCCTG 58 NA Mus musculus 50 H2afy ENSMUSG00000015937 ENSMUST00000045788 3 1 3 168 13 56205689 56205707 GTGGCTAAGAAGACAGGAG 59 56189691 56197491 GAACAACTTGCAACTTCTGG 59 NA Mus musculus 50 Wfdc2 ENSMUSG00000017723 ENSMUST00000017867,ENSMUST00000109345,ENSMUST00000109344,ENSMUST00000109343 3 4 4 140 2 164391428 164393842 CAAATTCTGAGCTTCAGCC 59 164393946 164393964 AAGGAGATGCTTTCATCGG 59 NA InUTR Mus musculus 50 Ctsa ENSMUSG00000017760 ENSMUST00000017904,ENSMUST00000103093,ENSMUST00000103092,ENSMUST00000109323,ENSMUST00000109319,ENSMUST00000109318 2 6 7 109 2 164659610 164659629 GGATGAAATCGATTGTCTCC 58 164659701 164659830 ACTCCACAAACCAGTAGTG 59 NA Mus musculus 50 Pscd4 ENSMUSG00000018008 ENSMUST00000109713 3 1 2 97 15 78433188 78436277 CTACTGGAAGACATCCAGC 59 78436335 78437399 GATACTGGATGCCCTTATTAGG 59 NA Mus musculus 50 Ncor1 ENSMUSG00000018501 ENSMUST00000018645,ENSMUST00000108708,ENSMUST00000101067 1 3 8 89 11 62162916 62162934 AAGAAGCTATGAGGCAGTG 59 62158811 62162866 CATATCAGACCCTCTAAAGGTG 59 NA Mus musculus 50 Rab5c ENSMUSG00000019173 ENSMUST00000107364,ENSMUST00000019317 3 2 2 116 11 100579831 100579849 TTTGAGATCTGGGACACAG 58 100579267 100579752 TGCAAATGTATCTGTGTTGG 58 NA Mus musculus 50 Lyst ENSMUSG00000019726 ENSMUST00000050664 3 1 2 81 13 13741132 13741152 TGGAATACATCCGAATCCG 59 13741197 13741215 TGTCTTCCAGAACTGATGG 58 NA Mus musculus 50 Tcfe2a ENSMUSG00000020167 ENSMUST00000105344,ENSMUST00000105343,ENSMUST00000105342,ENSMUST00000105346,ENSMUST00000105345,ENSMUST00000020377,ENSMUST00000105341,ENSMUST00000020379,ENSMUST00000105340,ENSMUST00000105339 3 10 10 80 10 79876076 79877918 ACTCCTATAGTGGACTCGG 59 79876014 79876033 TTTCCTCATCCTCTTTCTCC 58 NA Mus musculus 50 Ccdc139 ENSMUSG00000020280 ENSMUST00000020520,ENSMUST00000109525,ENSMUST00000058163 2 3 4 80 11 23606932 23607527 AGATTGCCATTTCCTAGGTG 59 23608758 23608777 GCCATTCTGGTAAATACCGA 59 NA Mus musculus 50 Clk4 ENSMUSG00000020385 ENSMUST00000109113,ENSMUST00000109114 1 2 6 88 11 51085445 51085464 GTAAATCCTCAGTCAGGAGC 59 51085515 51087070 CGATTTCATCGAATGCGAC 59 NA Mus musculus 50 Patz1 ENSMUSG00000020453 ENSMUST00000110043 3 1 7 147 11 3199198 3206233 CTGTAACCGAGGTTTCTCC 59 3206344 3206362 TTTGTTGCCATAGGTCCTG 59 NA Mus musculus 50 Aebp1 ENSMUSG00000020473 ENSMUST00000020766,ENSMUST00000102923 3 2 3 173 11 5766504 5766931 GAAGAGATGAAGAAGCCCA 58 5767650 5767668 TGACTCCATCCCAATAGGT 59 NA Mus musculus 50 Galnt10 ENSMUSG00000020520 ENSMUST00000066987 2 1 2 81 11 57585074 57591137 AGATCTCCTTCAAGGTGTG 58 57591182 57591200 TACTTCCTGTAGATGTGGC 58 NA Mus musculus 50 Sypl ENSMUSG00000020570 ENSMUST00000076698,ENSMUST00000020885 3 2 2 83 12 33659117 33659135 ATCCAGAATCAGGAGTGTC 58 33659182 33660470 TCAGAAAGCCAAAGATCAC 57 NA Mus musculus 50 Vmo1 ENSMUSG00000020830 ENSMUST00000021179 1 1 1 136 11 70327752 70327770 ATGACACAGCTCTGAATGG 59 70327319 70327337 TAAGAAGCTAGTGCCAGGA 59 NA DesignNoJunction Mus musculus 50 Eral1 ENSMUSG00000020832 ENSMUST00000080426 1 1 2 104 11 77888123 77889238 CTCGTCTTAAACAAGCAATACC 59 77888040 77888058 ATTGGCACAGATCTCTTCG 59 NA Mus musculus 50 Esr2 ENSMUSG00000021055 ENSMUST00000110418 1 1 6 113 12 77224305 77246239 AAATCCCTGGTATGTACCC 58 77224210 77224228 TCTTCGAAATCACCCAGAC 59 NA Mus musculus 50 4933426M11Rik ENSMUSG00000021133 ENSMUST00000085243,ENSMUST00000068519 2 2 2 86 12 81975491 81975509 AAAGACACTGCAGATTCAG 57 81975556 81978096 CAATAGTGGGATATCATCTGTG 58 NA Mus musculus 50 Coq6 ENSMUSG00000021235 ENSMUST00000110276,ENSMUST00000021661 3 2 2 94 12 85713687 85713705 CTCTACTCTACCAGTGCCA 59 85713760 85714642 GCCATAATCTGTTCTTTGAGAG 59 NA Mus musculus 50 Slc6a19 ENSMUSG00000021565 ENSMUST00000022048 3 1 2 80 13 73826537 73826556 TCTTCTACTCCTTCTCACTG 57 73823626 73826495 CCATCTCACAATTATTGTGC 57 NA Mus musculus 50 Gfm2 ENSMUSG00000021666 ENSMUST00000109434,ENSMUST00000022170 1 2 3 128 13 97911938 97911956 TCAGAGAACGTTCAGTGTG 59 97913045 97915623 TTGACATCACTTCCTGCTG 59 NA Mus musculus 50 Rnase10 ENSMUSG00000021872 ENSMUST00000022424 1 1 1 60 14 51627725 51627744 TCTAAAGCTGCTTACAAGTG 57 51628967 51628985 CATGAACAACAGATGCACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kpna3 ENSMUSG00000021929 ENSMUST00000022496,ENSMUST00000053719 1 2 2 80 14 62003586 62003952 GGAAACATTATAGGTGATGGTC 58 62003527 62003545 GATGAAGGACAGAAGAGGT 58 NA Mus musculus 50 Atp8a2 ENSMUSG00000021983 ENSMUST00000042284 1 1 2 138 14 60664865 60664883 CATTCTAACGATTGCAGGC 59 60662369 60663163 ATGGTTCTCCTCTTTCCAC 58 NA Mus musculus 50 Pla2g10 ENSMUSG00000022683 ENSMUST00000023364,ENSMUST00000115807 2 2 2 69 16 13725234 13725252 CTAAGTTAGACCGCTACCC 58 13715671 13715689 CATTTGTTCTCTGCTGGTC 58 NA DesignNoJunction Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000113989 3 1 16 102 16 91793919 91793938 ATCAAACTGAAGCTACAAGG 57 91794003 91828114 CTGAGATTCCAAATGCTGG 58 NA Mus musculus 50 Ssxb2 ENSMUSG00000023165 ENSMUST00000023931,ENSMUST00000103000 2 2 2 101 X 8032158 8035256 ACAGTGATGAAACTAGTGGC 59 8032076 8032097 CCTCTTCAGGATCACTAATCTC 59 NA Mus musculus 50 Rps6ka2 ENSMUSG00000023809 ENSMUST00000024575,ENSMUST00000024619 2 2 3 95 17 7487132 7487150 GAGATCAAGGAGGACATCG 59 7487209 7493272 ATCGATGATCTTCACAGCA 58 NA Mus musculus 50 Mapre2 ENSMUSG00000024277 ENSMUST00000115830 3 1 2 108 18 23931146 23991357 GCCTGGATGTTCAAATTGG 59 23991429 23991447 AGACACGATGTCATTGACC 59 NA Mus musculus 50 Brd2 ENSMUSG00000024335 ENSMUST00000095347,ENSMUST00000025193,ENSMUST00000114242,ENSMUST00000114241 1 4 4 105 17 34250420 34250526 AAGTAGCAACAAGCTACCT 58 34250333 34250351 ATCATAACTCATGGGCCTG 59 NA Mus musculus 50 Brd2 ENSMUSG00000024335 ENSMUST00000095347,ENSMUST00000025193,ENSMUST00000114242,ENSMUST00000114241 2 4 4 106 17 34250420 34250526 AAGTAGCAACAAGCTACCT 58 34250332 34250350 CATCATAACTCATGGGCCT 59 NA Mus musculus 50 Cd6 ENSMUSG00000024670 ENSMUST00000039043 2 1 4 195 19 10865936 10868642 TGCCAAAGAAGATTCCCAG 59 10865554 10865572 ATCACTGTTGTTCCTCACG 59 NA Mus musculus 50 Kcnk7 ENSMUSG00000024936 ENSMUST00000052448,ENSMUST00000113613 2 2 2 96 19 5706458 5706714 ACTTCTTGGTTACTTGCTCC 59 5706772 5706791 AAAGAATTTCACCATGGCAC 59 NA Mus musculus 50 Men1 ENSMUSG00000024947 ENSMUST00000113504,ENSMUST00000056391,ENSMUST00000113502,ENSMUST00000079327,ENSMUST00000113503,ENSMUST00000113500,ENSMUST00000078137 1 7 7 96 19 6337506 6337606 GGACATCTGGAAAGATACCC 59 6337665 6337683 GATAAAGGGTGAGTGGGTC 59 NA Nonspecific Mus musculus 50 Tdrd1 ENSMUSG00000025081 ENSMUST00000111606,ENSMUST00000078723,ENSMUST00000111604 1 3 3 80 19 56940483 56940925 TCCACTAAAGAGATACCACAC 58 56941043 56941063 GAGAATCTGTTCGTGTTTCTC 58 NA Mus musculus 50 Chuk ENSMUSG00000025199 ENSMUST00000026217 3 1 2 93 19 44161542 44162417 AAGAGCAGCAATGTTAAGTC 58 44161468 44161487 TTTAGCTTTGAGTTGCTGTG 58 NA Mus musculus 50 Hsd17b10 ENSMUSG00000025260 ENSMUST00000112617 2 1 2 80 X 148437997 148438016 GTGGCCATTAAGACATACCA 59 148438056 148438174 ATGTAGGATATTGATAACCCGC 59 NA Mus musculus 50 Usp33 ENSMUSG00000025437 ENSMUST00000026507 3 1 2 81 3 152036391 152036409 TACAGAAGTGTCATCTCCG 58 152036453 152037593 TTATAGACACCCTATCGCAC 58 NA Mus musculus 50 Nnt ENSMUSG00000025453 ENSMUST00000109208,ENSMUST00000109206,ENSMUST00000109205,ENSMUST00000099149,ENSMUST00000069902 3 5 6 83 13 120125205 120127192 GTCCAAACAGGTCATTGTC 58 120125140 120125161 GTGTTAGGTTTGTAGAAGATCG 58 NA Mus musculus 50 Apool ENSMUSG00000025525 ENSMUST00000113414 1 1 3 104 X 109447419 109447437 TTGACAACCATACCTGCAG 59 109451624 109459849 GAGTGAGCTAACTCTCCAC 59 NA Mus musculus 50 Pip5k3 ENSMUSG00000025949 ENSMUST00000097708,ENSMUST00000097707 2 2 4 90 1 65238789 65238807 AAGAACACAGTCTGTGAGG 59 65238860 65242240 CCTTCTGGAGTCTAACACTG 59 NA Mus musculus 50 Lmx1a ENSMUSG00000026686 ENSMUST00000111377,ENSMUST00000028003 2 2 2 99 1 169763018 169771044 GAGCCAAGATGAAGAAGCT 59 169774765 169774784 TTCCCACTACCATTTGTCTG 59 NA Mus musculus 50 Lhx6 ENSMUSG00000026890 ENSMUST00000112960,ENSMUST00000112963,ENSMUST00000112967,ENSMUST00000112966,ENSMUST00000112961,ENSMUST00000072054,ENSMUST00000053815 3 7 7 160 2 35958994 35959012 GACAAGGACGAAGGTAGAG 59 35958486 35958871 ATGAGGTTGTTGACCTTGAG 59 NA Mus musculus 50 Sec16a ENSMUSG00000026924 ENSMUST00000114082,ENSMUST00000091252 2 2 4 91 2 26285766 26285926 CCATTCACACCAGAGTCAG 59 26285693 26285712 AATCACCATGAAATGAGCCT 59 NA Mus musculus 50 Btbd14a ENSMUSG00000026932 ENSMUST00000028300,ENSMUST00000114159 3 2 3 82 2 25945111 25945129 GCCTATGATACCATGGTGG 59 25920123 25945065 TCTGGTTTCTCTTGCACTG 59 NA Mus musculus 50 Mamdc4 ENSMUSG00000026941 ENSMUST00000095117,ENSMUST00000114221,ENSMUST00000114223 3 3 3 94 2 25425491 25425509 CTATCGATGGCTTCGAGAC 59 25425328 25425433 CCATATACCAGCCCAAGTC 59 NA Mus musculus 50 Arrdc1 ENSMUSG00000026972 ENSMUST00000028349,ENSMUST00000114414 2 2 4 162 2 24782192 24782211 TATAAGCTGGTGAAGACTGG 58 24781953 24782071 CCTTATAGGATACCTTCTGTAGC 59 NA Mus musculus 50 Dync1i2 ENSMUSG00000027012 ENSMUST00000112142,ENSMUST00000112140,ENSMUST00000112144,ENSMUST00000100028,ENSMUST00000112136 2 5 8 158 2 71066664 71066682 TCCTATGTCTCCATCCTCC 59 71071762 71073986 TTAATAGGTCCTCGTCCCA 59 NA Mus musculus 50 Atf2 ENSMUSG00000027104 ENSMUST00000112007,ENSMUST00000055833,ENSMUST00000090802,ENSMUST00000112017,ENSMUST00000112016,ENSMUST00000100009,ENSMUST00000112010,ENSMUST00000112002 2 8 10 80 2 73657200 73661271 GTCTGGCTATCATACTGCTG 59 73657139 73657157 TGGATCGCTTCTGTATGTG 59 NA Mus musculus 50 Sema6d ENSMUSG00000027200 ENSMUST00000103239,ENSMUST00000077847,ENSMUST00000103238 3 3 9 170 2 124488096 124489763 GTATCCCAAAGGGTGTACG 59 124489896 124489915 GGATCTTTCTGTTCTTCCGA 59 NA Mus musculus 50 2210009G21Rik ENSMUSG00000027281 ENSMUST00000068516,ENSMUST00000099311,ENSMUST00000110094 1 3 5 81 2 136869803 136872461 CCAGAATACTGAACTTCGTG 58 136872505 136872523 TGCCCAAATATCATGACCA 58 NA Mus musculus 50 Prnd ENSMUSG00000027338 ENSMUST00000110169,ENSMUST00000110171,ENSMUST00000110172,ENSMUST00000110170,ENSMUST00000057812,ENSMUST00000089481 1 6 6 120 2 131779018 131779036 GATCTACTACGAAGGCTGC 59 131779120 131779138 CTTGCTATCCTGCTTCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dnmt3b ENSMUSG00000027478 ENSMUST00000056495,ENSMUST00000109771 3 2 10 85 2 153500772 153501471 GAAGAATTTCAGGAGCCAC 58 153501520 153501538 CCATCAAACAGAGACAGGA 58 NA Mus musculus 50 E2f1 ENSMUSG00000027490 ENSMUST00000000894,ENSMUST00000103145,ENSMUST00000109704 2 3 3 80 2 154390204 154390222 AGACTGACCATCAGTACCT 59 154389839 154390161 GAGATTTCACACCTTTCCCT 59 NA Mus musculus 50 Rpn2 ENSMUSG00000027642 ENSMUST00000029171 2 1 3 97 2 157109501 157116279 GCCAGATGTCAAGATATCTG 57 157116339 157116357 CAACTGCATGGTAGATCTG 57 NA Mus musculus 50 Nfkb1 ENSMUSG00000028163 ENSMUST00000106276 3 1 3 81 3 135253327 135253345 GGGATACTGAACAATGCCT 59 135248464 135253282 CTATCCCGGAGTTCATCTC 58 NA Mus musculus 50 4930547C10Rik ENSMUSG00000028314 ENSMUST00000029995,ENSMUST00000107671,ENSMUST00000107673 3 3 3 60 4 52623697 52623718 TTACAACATGGAGACCTATGAC 59 52623738 52623757 CGAACTCTTTGAAACAGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Stoml2 ENSMUSG00000028455 ENSMUST00000030169,ENSMUST00000107964 2 2 2 108 4 43043329 43043347 ATTGTTATCAACGTGCCTG 58 43043013 43043120 CGTAACTTGCCTTGTAAGG 58 NA Mus musculus 50 Sgip1 ENSMUSG00000028524 ENSMUST00000106882,ENSMUST00000066824 3 2 9 144 4 102601510 102607162 CACAGTTGAGAATGAACAGC 59 102628762 102628780 AGTTTCTGTGAAAGCTGCT 59 NA Mus musculus 50 St3gal3 ENSMUSG00000028538 ENSMUST00000106412,ENSMUST00000097912 3 2 5 85 4 117704476 117780162 AAGACTCCAAGTATGATAGGC 58 117687369 117687387 AAAGTTTGCGTACTTGGTG 58 NA Mus musculus 50 2310009E04Rik ENSMUSG00000028573 ENSMUST00000079223,ENSMUST00000107093,ENSMUST00000107091 1 3 8 107 4 95467323 95467341 AATGAAGGTGGTCAGAGTG 59 95478855 95488681 TATACTCTGGCATCTGGCT 59 NA Mus musculus 50 2210012G02Rik ENSMUSG00000028619 ENSMUST00000057043,ENSMUST00000030362 2 2 2 60 4 106812396 106820130 TGGAATTGAAGATGGATCAC 57 106812355 106812373 CAGAGATGAAACGTTTCCC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Macf1 ENSMUSG00000028649 ENSMUST00000097899,ENSMUST00000097898 2 2 12 108 4 123038258 123042523 AATACCGGTTTGGAGATTCTC 59 123038170 123038189 TTCACTAGAAACTCGTCCAG 59 NA Mus musculus 50 Eif2c3 ENSMUSG00000028842 ENSMUST00000030655 3 1 2 92 4 126045021 126047521 GAAATTAGCAGATTGAACCG 57 126044948 126044966 TTTGATTTCGACTCCTGTG 57 NA Mus musculus 50 Taf12 ENSMUSG00000028899 ENSMUST00000030731,ENSMUST00000105963 1 2 2 83 4 131838952 131840968 AACAACCAGGTATTGACCA 58 131841015 131841033 TTCCACATCTTCATCCAGC 59 NA Mus musculus 50 Rint1 ENSMUSG00000028999 ENSMUST00000030852 1 1 2 80 5 23306588 23306607 CCCAGATGGAAGAGATTGAG 59 23306649 23311141 GCTGAATGTTATCACTCAGC 58 NA Mus musculus 50 Mll5 ENSMUSG00000029004 ENSMUST00000094962,ENSMUST00000056291,ENSMUST00000115128 2 3 4 80 5 23002299 23002319 CAGGAGTCCTACAGTTAATGG 59 23002361 23002802 GGTGTGGTTAAATCTGGGA 59 NA Mus musculus 50 Slc26a5 ENSMUSG00000029015 ENSMUST00000030878 2 1 2 80 5 21343862 21346403 CTCAAGACACATATCTATAGGTCC 59 21343805 21343823 TCATCTGGTACTAACCGGA 59 NA Mus musculus 50 Clock ENSMUSG00000029238 ENSMUST00000031148,ENSMUST00000113499,ENSMUST00000075159 1 3 4 80 5 76664842 76664862 GTTGGTCCATCATTAACACAG 59 76660565 76664801 AAACTGAAACTGTGACATGC 59 NA Mus musculus 50 Spp1 ENSMUSG00000029304 ENSMUST00000086833,ENSMUST00000031243,ENSMUST00000112748,ENSMUST00000112747 2 4 4 120 5 104868455 104868473 GACACTTTCACTCCAATCG 58 104868555 104869257 CATCAGGATACTGTTCATCAG 57 NA Mus musculus 50 Tpst2 ENSMUSG00000029344 ENSMUST00000071455,ENSMUST00000031287,ENSMUST00000112373 1 3 3 253 5 112737486 112738715 CTCCTTGTCCAAGATCGAG 59 112740728 112740746 ATCCTTTCAGATTGGCTGG 59 NA DesignRelaxed Mus musculus 50 Camkk2 ENSMUSG00000029471 ENSMUST00000111668,ENSMUST00000047365,ENSMUST00000086224,ENSMUST00000111667 2 4 4 99 5 123198197 123200031 GTACATGGTGTTTGAGTTGG 59 123197982 123198001 CAGATCCTGGAAGTAGAAGC 59 NA Mus musculus 50 Glcci1 ENSMUSG00000029638 ENSMUST00000050350,ENSMUST00000064285 2 2 2 95 6 8529657 8529675 TACCCTGCAATGTAGAAGG 58 8529733 8532592 GTATATCCAATGGCTTGGAC 58 NA Mus musculus 50 Slc13a1 ENSMUSG00000029700 ENSMUST00000031713 1 1 2 130 6 24100803 24100824 CTACATCCTCTTTGTTATTGCC 59 24087170 24100712 AATAAGCAGAAGCCACCTG 59 NA Mus musculus 50 Dync1i1 ENSMUSG00000029757 ENSMUST00000115558,ENSMUST00000115554 1 2 5 80 6 5719781 5750782 CCATTAACAAGGAGACGAC 57 5750826 5750844 GGATACTACTTCCCTAGGC 57 NA Mus musculus 50 Add2 ENSMUSG00000030000 ENSMUST00000032069 2 1 2 99 6 86048626 86048644 GGACATGGCCTACTATGAC 59 86048707 86051160 TAGCACCAGAATCTTGCAG 59 NA Mus musculus 50 Atp2b2 ENSMUSG00000030302 ENSMUST00000101045,ENSMUST00000089003 2 2 3 80 6 113710683 113710701 TGATGAAGAACATCCTGGG 58 113709314 113710639 GGAACATCTTCTCACCCAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Atp2b2 ENSMUSG00000030302 ENSMUST00000101045,ENSMUST00000089003 3 2 3 81 6 113710683 113710702 ATGATGAAGAACATCCTGGG 59 113709314 113710639 GGAACATCTTCTCACCCAC 59 NA Nonspecific Mus musculus 50 Gp2 ENSMUSG00000030954 ENSMUST00000033255 2 1 2 81 7 126590708 126592502 AGTGTCAACCATCTTGCTC 59 126590645 126590663 GGTCCTAAATCCAGAACCC 59 NA Mus musculus 50 Frag1 ENSMUSG00000030990 ENSMUST00000106924,ENSMUST00000094127 2 2 4 114 7 109385055 109385640 CAGTAAGTCAGGAGGATCG 58 109385718 109385736 TCACAATACATGTTGTGCC 58 NA Mus musculus 50 Acsl4 ENSMUSG00000031278 ENSMUST00000033634,ENSMUST00000112904,ENSMUST00000112903,ENSMUST00000112907 3 4 4 80 X 138768260 138768278 ACACTACTGGAAGAGTTGG 58 138766912 138768217 GAACTGTATAACCACCTTCC 57 NA Mus musculus 50 Ard1 ENSMUSG00000031388 ENSMUST00000114387,ENSMUST00000114389,ENSMUST00000114390,ENSMUST00000033763,ENSMUST00000114391,ENSMUST00000096316 3 6 6 107 X 71166686 71166704 AGACCTGATGAACATGCAG 59 71166367 71166615 GCAATGTAAGAAAGCTGGG 59 NA Mus musculus 50 Rbpms ENSMUSG00000031586 ENSMUST00000033994,ENSMUST00000053251,ENSMUST00000033995 1 3 3 87 8 34944833 34944851 AACAAACTCGTAGGGACTC 58 34917311 34944782 CTGTGAGCTCATATGGCTC 59 NA Mus musculus 50 Gins3 ENSMUSG00000031669 ENSMUST00000034094 3 1 1 71 8 98161921 98161940 ATATTTCCCAGTCTCTGCTG 59 98167037 98167055 AAGAATTCTGGGAGGAGTC 58 NA DesignNoJunction Mus musculus 50 Aplp2 ENSMUSG00000031996 ENSMUST00000071125,ENSMUST00000079758 3 2 3 90 9 30963801 30965288 AGAATGAAGACACTCAGCC 59 30961039 30961057 TCTTCTGCACCAATCAGTC 59 NA Mus musculus 50 MGI:1330303 ENSMUSG00000032534 ENSMUST00000093791,ENSMUST00000016523 2 2 2 80 9 102504870 102505181 GTTACTAGAGGCTCTGCAG 59 102504808 102504826 TTTGCCTCAAGGATGAAGG 59 NA Mus musculus 50 Slco2a1 ENSMUSG00000032548 ENSMUST00000112818 2 1 2 106 9 102975548 102975566 CTTCTCCTCAGTCATTGCT 58 102975636 102979265 GAACTTGGTGTGCAATGAG 59 NA Mus musculus 50 Sfrs12 ENSMUSG00000032621 ENSMUST00000109322,ENSMUST00000074616 2 2 2 80 13 104548373 104549259 CATTGAACCAGAGTCTGGA 58 104548311 104548329 CTAGACCTGGACTTTGAGC 59 NA Mus musculus 50 Alox12b ENSMUSG00000032807 ENSMUST00000036424 1 1 2 80 11 68979549 68979744 TGTATAAGCTTCTCATCCCTC 58 68979786 68979804 CTCCCTTGTTGAGAAGGAG 59 NA Mus musculus 50 Styk1 ENSMUSG00000032899 ENSMUST00000049150,ENSMUST00000111992 2 2 2 94 6 131252370 131254732 GGAGATATTTGGTCCTTTGG 57 131251694 131251712 TATTGTAGGATGCTGGTGG 58 NA Mus musculus 50 Rasgrp2 ENSMUSG00000032946 ENSMUST00000113476,ENSMUST00000035716 3 2 5 80 19 6408556 6408842 GAGAAGATGGTGGAGTCTG 59 6408885 6408904 GATGATCTGAAACTCCTCCT 58 NA Mus musculus 50 Slc35d2 ENSMUSG00000033114 ENSMUST00000099441,ENSMUST00000091559 1 2 3 80 13 64200631 64200649 CTGATGTACTCCACAGCTC 59 64199697 64200588 CGATACATTCTTGATCGCTC 58 NA Mus musculus 50 Ipo13 ENSMUSG00000033365 ENSMUST00000036156 2 1 2 101 4 117577857 117577876 CATGATCATGTTCTGCACTG 59 117577666 117577793 AGAATGTCATCCTGCAGTG 59 NA Mus musculus 50 Mga ENSMUSG00000033943 ENSMUST00000110774,ENSMUST00000110773,ENSMUST00000046717 2 3 4 83 2 119757596 119757614 TCTTCTACTACGAAGGGCA 59 119757660 119758248 TTCTCGTATCACAGGATTGG 59 NA Mus musculus 50 Rnf185 ENSMUSG00000034587 ENSMUST00000044742 2 1 1 196 11 3371433 3371451 CACCAATGGTGATCAAAGC 59 3379284 3379302 TGACTATGGATGTTGGGAC 58 NA DesignNoJunction, InUTR Mus musculus 50 Ttyh2 ENSMUSG00000034714 ENSMUST00000045779 2 1 2 155 11 114572300 114573081 TCTGAGTACATGAACCAGG 58 114580490 114580508 GAACTCGTAGTGTCTCAGG 59 NA Mus musculus 50 Hmha1 ENSMUSG00000035697 ENSMUST00000099501,ENSMUST00000105373,ENSMUST00000043311 3 3 3 108 10 79489941 79490292 ATGTGAAGAGTGCTGTCTG 59 79490363 79490382 GAAGTCTTGTCCAAAGAGCT 59 NA Mus musculus 50 Ggta1 ENSMUSG00000035778 ENSMUST00000079424,ENSMUST00000113000 2 2 8 85 2 35268941 35277712 AATATGTCAACAGGACCCAC 59 35268875 35268893 CTCTTCAATGCGATCTCCA 59 NA Mus musculus 50 Dock4 ENSMUSG00000035954 ENSMUST00000037488 1 1 2 86 12 41563282 41565038 TGAGAAAGCTGTGAATCCC 59 41565088 41565106 ATAAGTTTCCCACTGTCCG 59 NA Mus musculus 50 Nme5 ENSMUSG00000035984 ENSMUST00000079287,ENSMUST00000115774 3 2 2 88 18 34738266 34738284 CAAGCCAGATGTTGTTGAC 59 34731300 34738214 GGTGTAGTTTCCGTCTCTG 59 NA Mus musculus 50 9030025P20Rik ENSMUSG00000036552 ENSMUST00000040594,ENSMUST00000097393,ENSMUST00000097394 1 3 5 190 17 15190334 15193715 ACAGTGTCAGAACTGAAGG 59 15195794 15196319 TTTCCTTCCAATCTGCCTG 59 NA Mus musculus 50 Fut7 ENSMUSG00000036587 ENSMUST00000041654,ENSMUST00000114278 2 2 3 147 2 25280289 25280415 AATTGTATTGGGTACCACCC 59 25280525 25280543 TAAGGATGGTGAGTGTGGA 59 NA Mus musculus 50 3321401G04Rik ENSMUSG00000036667 ENSMUST00000045054,ENSMUST00000045140 3 2 3 80 6 42628119 42628137 CTCTACATACCTGGAAGGC 58 42627531 42628076 GCCAATTTGTATCTTCAGGT 58 NA Mus musculus 50 Pramel5 ENSMUSG00000036749 ENSMUST00000035757,ENSMUST00000105752 1 2 2 72 4 143862566 143862584 TACTTCCTGAAAGAACGCC 59 143861668 143861686 GAGTGATAGCAAGGGTCTC 59 NA DesignNoJunction Mus musculus 50 Aifm1 ENSMUSG00000036932 ENSMUST00000037349,ENSMUST00000114945 2 2 2 81 X 45835982 45836344 AAAGTCAAACGAGAGGGAG 59 45835919 45835937 TAATGAGTAACCTGCCACC 58 NA Mus musculus 50 Depdc5 ENSMUSG00000037426 ENSMUST00000046788,ENSMUST00000087897,ENSMUST00000114460,ENSMUST00000049780 2 4 4 80 5 33270524 33270543 CATGTCCTTGAACTTCAGTG 58 33270586 33276614 GTCCTAGGATTCACACCTG 59 NA Mus musculus 50 Rps6kc1 ENSMUSG00000037581 ENSMUST00000061611,ENSMUST00000062296 2 2 4 90 1 192622610 192622900 ATGATGGAGGACACATTCAG 59 192622539 192622557 CAGTACATTCTCGCTACGG 59 NA Mus musculus 50 Nek5 ENSMUSG00000037738 ENSMUST00000081815 1 1 2 81 8 23199327 23199345 AGCACAGATGTAAGGAGGA 59 23196046 23199282 AAGAAACCCTCTGCTTCTG 59 NA Mus musculus 50 Darc ENSMUSG00000037872 ENSMUST00000038227 3 1 1 60 1 175262421 175262439 ATCTTCACTGTATTGCCAC 57 175262379 175262397 TGCTCAGTGCTATCTTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Igsf9 ENSMUSG00000037995 ENSMUST00000052629,ENSMUST00000111235 1 2 3 106 1 174424675 174424890 GTATATGTGCTAGGCACCAG 59 174424959 174424977 AGATAGCCACCATCAAAGC 59 NA Mus musculus 50 Scgb3a2 ENSMUSG00000038791 ENSMUST00000115525,ENSMUST00000043803 2 2 2 60 18 43926423 43926441 ATTCCCTCATTTGATCCCT 57 43926464 43926483 GATGTTCTACAGAAATGCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rxrb ENSMUSG00000039656 ENSMUST00000044858,ENSMUST00000044956,ENSMUST00000116612 3 3 3 89 17 34173897 34174117 CTGTTTAATCCAGACGCCA 59 34174170 34174188 GCAATAGGTCTCCAGTGAG 59 NA Mus musculus 50 Pitpnm3 ENSMUSG00000040543 ENSMUST00000075258,ENSMUST00000108508,ENSMUST00000108507 2 3 3 177 11 71885083 71887931 CTCGTCTCTAACCTGAACC 59 71884924 71884942 CAGAGGACTTGAGGAACTC 58 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000111370,ENSMUST00000099723,ENSMUST00000077941,ENSMUST00000066473,ENSMUST00000099725 2 5 17 184 2 91000519 91002194 GCATCTGTTGAATTGTGGA 58 90998626 90998644 ACAGAGTCTTGATCAGTCC 58 NA Mus musculus 50 Rbm35a ENSMUSG00000040728 ENSMUST00000108310,ENSMUST00000108311 3 2 6 80 4 11265974 11271272 TCCAAGGTTACCAGTATGC 58 11265912 11265932 AAACCCATTCTTTGGGTAGAG 59 NA Mus musculus 50 Rnasek ENSMUSG00000040904 ENSMUST00000040428 1 1 1 60 11 70052460 70052478 GTTAATTGAGGACGTTCCC 58 70051951 70051970 GTATATGTTCTGAGGACCGT 58 NA DesignNoJunction Mus musculus 50 Mbp ENSMUSG00000041607 ENSMUST00000114681,ENSMUST00000114673 2 2 10 81 18 82742311 82744574 AGAACATTGTGACACCTCG 59 82744946 82744964 ACAGAAACATTGACGTGGT 59 NA Mus musculus 50 Poldip3 ENSMUSG00000041815 ENSMUST00000058793 1 1 2 91 15 82967976 82968571 AACTATCCAGGTTCCACAG 58 82967903 82967921 TAGCCTGGTGGTTATTGAC 58 NA Mus musculus 50 Wipi1 ENSMUSG00000041895 ENSMUST00000103060,ENSMUST00000047186,ENSMUST00000106689,ENSMUST00000047201 1 4 4 105 11 109465146 109467206 TGGAAGCAATGAAATCCCT 59 109465059 109465077 ATGGTAGACGTTCATCTGC 59 NA Mus musculus 50 2010015L04Rik ENSMUSG00000042233 ENSMUST00000105623,ENSMUST00000094408 3 2 4 93 4 154816165 154816183 GTACCCATTACCTTCACCC 59 154816237 154816956 TTTAGTAAATCGGTGGACTCTG 59 NA Mus musculus 50 Reln ENSMUSG00000042453 ENSMUST00000115152,ENSMUST00000062372 3 2 3 80 5 21545373 21545393 TATGACAACGGGATAACATGG 59 21540602 21545334 CTCTACAGAGATTATTCTGGGC 59 NA Mus musculus 50 Stk40 ENSMUSG00000042608 ENSMUST00000116286,ENSMUST00000094761,ENSMUST00000035441 3 3 3 137 4 125814426 125815008 CATCATTGCATCTTGGCAG 59 125816073 125816091 TCAAACTCGTATTGGGAGC 59 NA Mus musculus 50 Flad1 ENSMUSG00000042642 ENSMUST00000050398,ENSMUST00000107426,ENSMUST00000107429 3 3 3 80 3 89209827 89209846 AGATCCTGTACATTCGTAGC 58 89209682 89209787 GGAGATTATACCTCTTGATGGT 58 NA Mus musculus 50 Olfr1426 ENSMUSG00000044994 ENSMUST00000057060,ENSMUST00000112952 1 2 2 205 19 12163935 12163953 CAGTCCTCTGTCATTTCAC 57 12163250 12163268 TAAGTTCTTTCACCCTGGT 58 NA DesignNoJunction, InUTR Mus musculus 50 Sh2d5 ENSMUSG00000045349 ENSMUST00000105824,ENSMUST00000062126,ENSMUST00000105823,ENSMUST00000116271 3 4 5 199 4 137811606 137812638 CTGGAGAGGTCCATATCCT 59 137812801 137812819 ATTCTGTGACAGCTGATCC 59 NA DesignRelaxed Mus musculus 50 Lcn6 ENSMUSG00000045684 ENSMUST00000114199,ENSMUST00000114198,ENSMUST00000114197 3 3 4 140 2 25536307 25536326 ATGAGGTCTTCAACACAGTG 59 25536548 25536779 CACAAGTGAGGTCCTTCTG 59 NA Mus musculus 50 Tmem104 ENSMUSG00000045980 ENSMUST00000100235,ENSMUST00000061450 3 2 3 86 11 115066890 115089745 TCTATCTGGCCATCTTCAC 58 115089795 115089813 TAGAGGTCAAGATCTGCAG 58 NA Mus musculus 50 Tmem104 ENSMUSG00000045980 ENSMUST00000100235,ENSMUST00000061450 1 2 3 80 11 115066888 115089745 AATCTATCTGGCCATCTTCAC 59 115089785 115089805 AAGATCTGCAGGTACTTAGTC 58 NA Mus musculus 50 Clec9a ENSMUSG00000046080 ENSMUST00000088075 3 1 2 89 6 129365299 129365318 CATTGGTGAACCTTACACAG 58 129365370 129369508 AGTCACTACCTGAATGGAG 57 NA Mus musculus 50 Fbxw10 ENSMUSG00000047821 ENSMUST00000072639,ENSMUST00000055006,ENSMUST00000108703 3 3 4 80 11 62650280 62650299 TCAACTCTGAACTTGATCCA 58 62650340 62650750 GATGTCATATTCCTCTTCCCT 58 NA Nonspecific Mus musculus 50 Isg20l2 ENSMUSG00000048039 ENSMUST00000055984 3 1 1 96 3 87736110 87736128 CTACATCGTCAACTACCGG 59 87736187 87742504 CTTCAAGATCTGACTCCGAG 59 NA Mus musculus 50 Olfr19 ENSMUSG00000048101 ENSMUST00000057886 2 1 1 60 16 16673873 16673891 TCTTCCTTTCCAACCTGTC 59 16673831 16673849 ATCTTTGGGATGCTAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:2446196 ENSMUSG00000048201 ENSMUST00000035327,ENSMUST00000099282 3 2 2 66 2 146040357 146040375 GATAGCCTACCGGTTAGAG 58 146040405 146040423 CCTTTGGAGGTATTTCTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Arhgap30 ENSMUSG00000048865 ENSMUST00000111282 3 1 2 121 1 173335219 173335238 TCTAATGTCTCCTTGGTCAG 58 173337398 173337495 TTCTCATCTGATGCTAGGG 58 NA Mus musculus 50 Elfn1 ENSMUSG00000048988 ENSMUST00000050519,ENSMUST00000110830 2 2 2 60 5 140448675 140448693 GACTCGAATACCCTACCTG 58 140448717 140448735 CTCCACCAGCTTATACTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700067C01Rik ENSMUSG00000049123 ENSMUST00000048659 3 1 2 137 7 30510266 30510284 CATGAGCCCATCGATACAG 59 30509251 30510058 TGCACATGTATAGACCTGTC 59 NA Mus musculus 50 Ppm2c ENSMUSG00000049225 ENSMUST00000108297,ENSMUST00000108299,ENSMUST00000108302,ENSMUST00000095144,ENSMUST00000108301,ENSMUST00000056050 1 6 6 60 4 11888123 11888142 CCAGAGGTAACTTATCACAG 57 11888082 11888101 CATCAGTTGCTAACACTAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr273 ENSMUSG00000049648 ENSMUST00000107670,ENSMUST00000051520 2 2 2 60 4 52869091 52869110 ATTTCTTTCTCTGGTTGTGC 58 52869050 52869068 ATTCTGTTGATCCCATTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pnma5 ENSMUSG00000050424 ENSMUST00000051569 2 1 2 60 X 70281652 70281671 GGTTCCTTCAGTCTTCTCAG 59 70281611 70281632 TCTAAACGTAGCAAGTAGTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 P2ry10 ENSMUSG00000050921 ENSMUST00000053375 3 1 1 129 X 104285041 104285059 AGTTGACAAGGAGTAGTGG 58 104297831 104297849 TAAGTGGCATTGCAATTGC 59 NA DesignNoJunction, InUTR Mus musculus 50 Kctd16 ENSMUSG00000051401 ENSMUST00000091927 3 1 1 60 18 40418262 40418285 GTTATATTCTGGACTATCTCAGGG 59 40418303 40418322 CTTTCTGGAAAGTGATCAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Casr ENSMUSG00000051980 ENSMUST00000063597 3 1 2 141 16 36509787 36509805 TACAACGTGTACTTAGCCG 59 36500478 36509682 GTAGGTGTTTCAGGACCTG 59 NA Mus musculus 50 Pard3b ENSMUSG00000052062 ENSMUST00000063725 2 1 5 81 1 61814560 61814578 CACAGATGGAGGAATCCTG 59 61814622 62056895 AAACACAGCAATCAGTACCT 59 NA Mus musculus 50 Il1rapl1 ENSMUSG00000052372 ENSMUST00000113964,ENSMUST00000113965 1 2 4 80 X 84014660 84030644 CTTCATAAACGAGCTGCTG 58 84014598 84014617 AGGAGGCCTGATAATTTCTC 58 NA Mus musculus 50 Rexo4 ENSMUSG00000052406 ENSMUST00000064244,ENSMUST00000114020 3 2 3 83 2 26811863 26811881 TTTGTTCCTTGACCATCCA 59 26811079 26811816 GGTCGTCCACTCTTTACTC 59 NA Mus musculus 50 ENSMUSG00000052469 ENSMUSG00000052469 ENSMUST00000080075,ENSMUST00000097403 3 2 2 92 17 13549342 13549360 AAGACCTTGAAGAAGCAGG 59 13549416 13552623 TATGTACACTGGCAGAGTG 58 NA Nonspecific Mus musculus 50 H2-T9 ENSMUSG00000056116 ENSMUST00000058801 3 1 3 224 17 36177463 36177481 GAGTTACACATGCCATGTG 58 36175706 36175932 AGTAAAGACTCGCCAACTG 59 NA DesignRelaxed Mus musculus 50 Centa1 ENSMUSG00000056413 ENSMUST00000110865,ENSMUST00000070498,ENSMUST00000075389 1 3 3 112 5 139756764 139769100 ATACTCTACAGGCTACCGT 59 139756670 139756688 TGAAGTATTTCAGGGCACC 59 NA Mus musculus 50 Chn1 ENSMUSG00000056486 ENSMUST00000112024 2 1 3 110 2 73545053 73545073 TCTAGAGAAGAGACTGACCAG 59 73517948 73544984 CTGACTTCCAAATCTTAAAGCC 59 NA Mus musculus 50 Acbd4 ENSMUSG00000056938 ENSMUST00000024492,ENSMUST00000107040,ENSMUST00000107039,ENSMUST00000074474,ENSMUST00000092558 3 5 6 139 11 102965458 102965476 TCTCTGAGATGAAGCTGGT 59 102965839 102965857 TCTCAAGAAGGTTTCTGGG 58 NA DesignNoJunction Mus musculus 50 Olfr397 ENSMUSG00000057050 ENSMUST00000074250,ENSMUST00000108465 1 2 2 60 11 73778727 73778747 GTCATTATTGTCCCATTCCTG 58 73778768 73778787 GAATGGAGGACACTATTCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Skap1 ENSMUSG00000057058 ENSMUST00000100521,ENSMUST00000103154,ENSMUST00000071510 1 3 7 80 11 96402730 96402748 CAATCTGAGTGGGACTCAC 59 96402792 96563932 TCTTCTATTCCCTCGTCCT 58 NA Mus musculus 50 Ryr3 ENSMUSG00000057378 ENSMUST00000099579 2 1 3 82 2 112487272 112489445 TCAGACCAAGTTATTGGTCAC 59 112487210 112487231 CATCATTGAATGAGTTCCACAG 59 NA Mus musculus 50 Whsc1 ENSMUSG00000057406 ENSMUST00000114396 1 1 4 60 5 34211500 34211519 TCCTTCTGCATCCTTAACTG 59 34214070 34214088 GTCCAACTTGACTGATGTG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Unc13d ENSMUSG00000057948 ENSMUST00000106450,ENSMUST00000106451,ENSMUST00000075036,ENSMUST00000106449 2 4 4 156 11 115937822 115937840 CCTCTATACTGTCCTGCAC 58 115937477 115937590 AAATACTGGCTTCTCGAGC 59 NA Mus musculus 50 Unc13d ENSMUSG00000057948 ENSMUST00000106450,ENSMUST00000106451,ENSMUST00000075036 2 3 4 81 11 115931067 115931085 TAAATCTGGTACAGGACGT 57 115930920 115931022 ATCTTGAGGACATTGTGGA 58 NA Mus musculus 50 Nrf1 ENSMUSG00000058440 ENSMUST00000115212,ENSMUST00000115211,ENSMUST00000115206,ENSMUST00000115209,ENSMUST00000115200,ENSMUST00000115199,ENSMUST00000069808,ENSMUST00000069831,ENSMUST00000004761 2 9 10 63 6 30066240 30066258 CAGACCGTAGTACAGACCT 59 30066285 30067065 CTGTACCAACCTGGATGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Defb50 ENSMUSG00000058568 ENSMUST00000078879 2 1 1 61 8 22941550 22941568 TTCACGTCAGGATCAAGTG 59 22941593 22941611 GAAAGAGCAATTGTCACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hnrpa3 ENSMUSG00000059005 ENSMUST00000111964,ENSMUST00000111962,ENSMUST00000090792 2 3 5 172 2 75500965 75501628 ATGGATTTGGAGGTGATGG 59 75501764 75503095 ACCATAGTTACCTCCACCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Kcnh7 ENSMUSG00000059742 ENSMUST00000075052,ENSMUST00000112454,ENSMUST00000112452 2 3 3 82 2 62715408 63020125 TATCACAAGAATGGTTCCAC 57 62715345 62715363 ATGAACATCATAGCCACAC 57 NA Mus musculus 50 Serpinb12 ENSMUSG00000059956 ENSMUST00000081277,ENSMUST00000112724 1 2 3 80 1 108846264 108847286 TCCAATCTGCTCAGAATACTC 59 108847325 108847346 GAATCCTTCTGGAAATCTACAC 58 NA Mus musculus 50 Erbb4 ENSMUSG00000062209 ENSMUST00000081091,ENSMUST00000097703 2 2 3 91 1 68118154 68118173 TGCTGAGGAATATTTGGTCC 59 68089303 68118103 CAAACTGATTCCTATTGGAGTC 58 NA Mus musculus 50 Armc9 ENSMUSG00000062590 ENSMUST00000113309,ENSMUST00000027434,ENSMUST00000027006 3 3 3 85 1 88068715 88070141 ATAGCAAAGAACTGCTGCA 59 88070189 88070208 CTTATTGTACCGCTTCAGGT 59 NA Mus musculus 50 Kif1b ENSMUSG00000063077 ENSMUST00000105694 1 1 4 80 4 148572566 148572584 ATCATCTCTGCTAAGTCCC 58 148566787 148569593 GTAGAAGGTCCTAGGAATATCC 58 NA Mus musculus 50 Zfp563 ENSMUSG00000067424 ENSMUST00000087650 2 1 2 144 17 33237651 33239191 TGGGACTGTCTAACTTTCG 58 33239296 33239502 CTTCCTCAATTTGTCCTATAGC 58 NA Mus musculus 50 Actc1 ENSMUSG00000068614 ENSMUST00000090269 3 1 2 84 2 113874035 113874917 CCCTCTTTCATTGGTATGG 57 113873969 113873987 CTTTGCGGATATCGATGTC 58 NA Mus musculus 50 Clec16a ENSMUSG00000068663 ENSMUST00000066345 1 1 6 80 16 10571682 10573395 TGTCTACAAAGTGTCATTGG 57 10573438 10573456 AAATTGGAGAAGTACGGGA 58 NA Mus musculus 50 C330046G03Rik ENSMUSG00000069581 ENSMUST00000105402,ENSMUST00000092368,ENSMUST00000092366 3 3 3 142 10 77329107 77330428 CTATTCACAGGTGTGATAAGG 57 77330532 77330550 TTATCATCAGGCTTCCCTG 58 NA Mus musculus 50 Ahnak ENSMUSG00000069833 ENSMUST00000092955,ENSMUST00000079602,ENSMUST00000043246 3 3 5 81 19 9075340 9111653 CTGAAGTGGTTCTGAACAC 58 9111698 9111716 GCTTTGTTGATAGCTTCCT 57 NA Mus musculus 50 Ctcfl ENSMUSG00000070495 ENSMUST00000109117,ENSMUST00000094287 2 2 2 111 2 172927442 172927460 CTGAGGAAGTACCATGACC 59 172920917 172920935 GGTCACACTTCTTTCTGTG 58 NA DesignNoJunction Mus musculus 50 6330408A02Rik ENSMUSG00000070814 ENSMUST00000108532 1 1 2 108 7 13846298 13846316 ATAGTGTAGCTCAGTGCCT 59 13846207 13846225 TCACTCTCCAACAACACTC 59 NA DesignNoJunction Mus musculus 50 4933437K13Rik ENSMUSG00000071669 ENSMUST00000115813,ENSMUST00000096273 2 2 2 80 16 11660649 11660667 GCACTGATCAATGTCTGGA 59 11660708 11715015 AATGTAGACCTGATACACATGG 59 NA Mus musculus 50 Nup62cl ENSMUSG00000072944 ENSMUST00000101212 3 1 2 82 X 136559866 136562114 GAGATGATTTACAGATTGGCAG 59 136559805 136559823 AGGTAAACAACGATGTCCT 58 NA Mus musculus 50 Gprasp2 ENSMUSG00000072966 ENSMUST00000096320 1 1 2 180 X 132373800 132374338 AGGTCTGGCATATTCTGAC 58 132375002 132375169 CTTAAAGCAGGGCAATCTC 58 NA Nonspecific, InUTR Mus musculus 50 OTTMUSG00000021199 ENSMUSG00000072999 ENSMUST00000081929 2 1 2 85 6 72586499 72586517 GCAAGCTACATAGGTCGAG 59 72587102 72587123 CATAATGGAATCTGATTCCCTC 58 NA DesignNoJunction Mus musculus 50 Ifi204 ENSMUSG00000073489 ENSMUST00000000264,ENSMUST00000111214 2 2 2 66 1 175679360 175679378 CTTCCACTGAAGATGGGTG 59 175677738 175679330 CTAGCATTGATGACCTGCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Pramel4 ENSMUSG00000073724 ENSMUST00000105759,ENSMUST00000084191 3 2 6 88 4 143656669 143656688 TATTATTGGGCCAAGCAGAG 59 143656738 143656802 AATTCCTGGATTGAGGAGTG 59 NA Nonspecific Mus musculus 50 Mup1 ENSMUSG00000073832 ENSMUST00000071005,ENSMUST00000107484,ENSMUST00000095049,ENSMUST00000107488,ENSMUST00000107489 1 5 5 81 4 61099316 61100105 CCATACTGTAAGAGATGAAGAG 57 61099256 61099274 CGTCACAGAATATTCACCA 57 NA Nonspecific Mus musculus 50 Olfr603 ENSMUSG00000073953 ENSMUST00000104880,ENSMUST00000098204 1 2 2 60 7 110458444 110458463 TTCATTGATCTTGGCCTCTC 59 110458486 110458504 TGAACCAGAAGATACCCAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 IGHE ENSMUSG00000076611 ENSMUST00000103415 2 1 3 82 12 114510589 114510609 CTACTCCATTCATTGCGAC 58 114510525 114510543 CATCATTTAGGATGTGGCC 58 NA Mus musculus 50 IGHV1-37 ENSMUSG00000076705 ENSMUST00000103514 1 1 1 60 12 116134510 116134529 GTAGACAAATCCTCTAGCAC 57 116134469 116134487 CAAAGTCCTCAGATGTCAG 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 IGLV3 ENSMUSG00000076939 ENSMUST00000103751 3 1 1 60 16 19241495 19241513 GAATGGTATCAGCAACAGC 58 19241453 19241474 CATCTTTCTTAAGCTCCATCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2BE20_MOUSE ENSMUSG00000078879 ENSMUST00000100276 1 1 3 93 2 176463348 176463367 CCTATAGGAATCTCACAGCT 57 176463629 176467600 ATGTCAGGACTTCCAAGAC 58 NA Nonspecific Mus musculus 50 mmu-mir-346 ENSMUSG00000065481 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-540 ENSMUSG00000072900 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-688 ENSMUSG00000076009 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-758 ENSMUSG00000076459 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Wnt9a ENSMUSG00000000126 ENSMUST00000108783 1 1 2 92 11 59142183 59142201 TTTGTCAAGGAGTTCCTGG 59 59142256 59144403 CTTTATCACCTTCACACCCA 59 NA Mus musculus 50 Clec2f ENSMUSG00000000248 ENSMUST00000000254,ENSMUST00000075789 3 2 2 92 6 128930250 128930268 CTGCTAAGCTTTACTGCTG 58 128930324 128931237 GTTCTGTCTTTGTTGCTGG 59 NA Nonspecific Mus musculus 50 Alox12 ENSMUSG00000000320 ENSMUST00000000329,ENSMUST00000108574 1 2 2 95 11 70063752 70064963 ATGGCTATCCAGATTCAGC 59 70063675 70063693 GATCTTAGCCAAGAGCCAG 59 NA Mus musculus 50 Rtcd1 ENSMUSG00000000339 ENSMUST00000000348 3 1 1 84 3 116192245 116195909 CTAGCAAAGGCCAAATTTACC 59 116192181 116192199 TTCCTTCACACTCGATGAC 59 NA Mus musculus 50 C1ql4 ENSMUSG00000001076 ENSMUST00000064462 3 1 1 63 15 98917626 98917644 CGATCTGATGAAGAACGGA 59 98915323 98915341 GTAGTTCTGATCCGCATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rhbg ENSMUSG00000001417 ENSMUST00000001453 2 1 1 141 3 88051749 88052206 GTGGAGAGTTTGATCAACG 58 88051626 88051644 GTATAAACTCGTTGACGCT 57 NA Mus musculus 50 Klf4 ENSMUSG00000003032 ENSMUST00000107619,ENSMUST00000003116 2 2 2 109 4 55542744 55542879 ATTATCAAGAGCTCATGCCA 59 55542654 55542672 ATAGTCACAAGTGTGGGTG 59 NA Mus musculus 50 BC011426 ENSMUSG00000003198 ENSMUST00000054780 2 1 1 165 17 56035617 56036590 CATGGAAGGTGTATCAACTG 58 56036718 56036736 GTATTCCCACTGAAACTGG 57 NA Mus musculus 50 Fxyd4 ENSMUSG00000004988 ENSMUST00000005114 3 1 1 106 6 117884512 117885039 CCCTTCTACTATGACTGGGA 59 117884351 117884369 CTACATTTGCACTTGCCAC 59 NA Mus musculus 50 Plekha8 ENSMUSG00000005225 ENSMUST00000005357,ENSMUST00000101385 2 2 2 81 6 54574560 54574578 GAACTTCTGGAGGACAGTG 59 54574622 54578848 CAAGTTTGTCTAGGACTGGA 58 NA Mus musculus 50 Ttc25 ENSMUSG00000006784 ENSMUST00000092684 1 1 2 80 11 100415016 100415184 GACATTGACATGGTGTTGAC 59 100415225 100415245 TTCCAGAACCTTCTTAAGGAC 59 NA Mus musculus 50 Pcdha1 ENSMUSG00000007440 ENSMUST00000047614 2 1 9 235 18 37182262 37315811 AGAACATTTGAAAGAGCCC 57 37344652 37344671 CGTATTTAAAGGTCCAGCTG 58 NA DesignNoJunction Mus musculus 50 Hmgcll1 ENSMUSG00000007908 ENSMUST00000008052 2 1 1 109 9 75978144 75978162 CTGTATCCGGATTAGGTGG 58 75978235 75981570 ATCCACACCTGTATTGAGC 59 NA Mus musculus 50 Pdcl ENSMUSG00000009030 ENSMUST00000009174,ENSMUST00000112940 2 2 2 80 2 37211201 37211219 CCATCTGGATGAAGAGGAG 58 37207886 37211160 AACTCCTTTAGAGTCATCTTCC 59 NA Mus musculus 50 Nf2 ENSMUSG00000009073 ENSMUST00000109910,ENSMUST00000109907,ENSMUST00000056290,ENSMUST00000053079,ENSMUST00000093374,ENSMUST00000109908 1 6 6 81 11 4706305 4706323 AGATGACTCCGGAAATGTG 59 4703742 4706260 ATTTCAGCTTCATCCCTGG 59 NA Mus musculus 50 Rnmt ENSMUSG00000009535 ENSMUST00000009679,ENSMUST00000025427 3 2 2 82 18 68478835 68478854 GCAGAGTACCTGAAGAAGAG 59 68479902 68480981 AAGTAGATACTTGTAGCTTCCC 59 NA Mus musculus 50 Grid2ip ENSMUSG00000010825 ENSMUST00000110733 2 1 2 131 5 144124264 144124282 AAGGAGCAGGTGTTTACTG 59 144124374 144134682 AATAAAGATCCTGAGGTTGTCC 59 NA Mus musculus 50 Ubxd5 ENSMUSG00000012126 ENSMUST00000070246 2 1 2 146 4 133665026 133665484 ACGGAAATGAAGATGAGGT 58 133679327 133679345 GTTTGTCAAAGTCCACCTC 58 NA Mus musculus 50 Rpl15 ENSMUSG00000012405 ENSMUST00000079419,ENSMUST00000100799,ENSMUST00000080281 1 3 4 153 14 19102918 19102937 CTATGGAGGAAGAAGCAGTC 59 19102549 19102802 TGACATAGCCTTGCTTAGC 59 NA Nonspecific Mus musculus 50 E130303B06Rik ENSMUSG00000013155 ENSMUST00000013299 2 1 1 118 8 108227915 108228024 ATCTGCTACAAAGCCAGAG 59 108227815 108227834 TTCTATTTGCACCAACTTCC 58 NA Mus musculus 50 Rnf170 ENSMUSG00000013878 ENSMUST00000110580,ENSMUST00000014022,ENSMUST00000110579,ENSMUST00000110577,ENSMUST00000110575 2 5 5 62 8 27236441 27239526 AAACAGAACAGGATGTCCC 59 27239551 27239570 TTGGACAGTACATTTCAGTG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Efr3a ENSMUSG00000015002 ENSMUST00000096411 2 1 3 70 15 65619875 65619893 TCTTCTGGGAAACGAAAGG 59 65619926 65621703 GTCAAGACAGTCCATATGCA 59 NA DesignNoJunction Mus musculus 50 Fbxw5 ENSMUSG00000015095 ENSMUST00000015239,ENSMUST00000100316 3 2 2 112 2 25359839 25359949 TGATAACAGGTACCTGTATGTG 59 25360022 25360040 GATCAAACACCAGCAAGTC 59 NA Mus musculus 50 Gzmb ENSMUSG00000015437 ENSMUST00000015581 2 1 1 93 14 56879481 56879499 CAGCAAGTCATCCCTATGG 59 56879270 56879425 TACTCTTCAGCTTTAGCAGC 59 NA Mus musculus 50 Lcorl ENSMUSG00000015882 ENSMUST00000045586,ENSMUST00000016026,ENSMUST00000113981,ENSMUST00000087164,ENSMUST00000067997 2 5 5 90 5 46166750 46167668 AGCAGTCAGTGATTGTATACC 59 46166680 46166698 CTTATCAGTGTGGGACTGG 59 NA Mus musculus 50 Exosc10 ENSMUSG00000017264 ENSMUST00000017408,ENSMUST00000076022,ENSMUST00000097781 3 3 3 80 4 147947423 147947441 CTGAGGGCAAAGAAGAGAC 59 147947483 147949927 TGTTAGGTTCACTGAACAGAG 59 NA Mus musculus 50 Hspb9 ENSMUSG00000017832 ENSMUST00000017976 1 1 1 102 11 100575478 100575496 GATAGACGGCCAGAATCTG 59 100575562 100575580 CATTTGTCGGTGAACACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rai12 ENSMUSG00000018565 ENSMUST00000108595,ENSMUST00000108594,ENSMUST00000018709 2 3 3 81 11 69788587 69788606 TCACATTCCCTGTGTTACAC 59 69784228 69788545 TACTAGGGAGTTATCACCTGG 59 NA Mus musculus 50 Ccl4 ENSMUSG00000018930 ENSMUST00000019074 1 1 1 99 11 83476988 83477006 GTTTCTCTTACACCTCCCG 59 83477069 83477807 TTGGTCAGGAATACCACAG 58 NA Mus musculus 50 Hars2 ENSMUSG00000019143 ENSMUST00000019287 2 1 1 80 18 36950203 36950222 CATTATTGGTGAGCAAGAGC 59 36950262 36950737 CGATTAATGGTCACTTCTTCTC 58 NA Mus musculus 50 Wasf1 ENSMUSG00000019831 ENSMUST00000019975,ENSMUST00000105509 3 2 2 80 10 40650526 40650545 CCATTGCAAGAAACATACGA 58 40650588 40651737 TTCCTTACCATCATCCCTG 58 NA Mus musculus 50 Slc22a16 ENSMUSG00000019834 ENSMUST00000078314,ENSMUST00000019978 3 2 2 80 10 40307368 40307388 GAAAGACTATGCTCCTCTTCC 59 40307430 40311602 CAGTCTTGTAATCCGAGGG 59 NA Mus musculus 50 Nmbr ENSMUSG00000019865 ENSMUST00000020015 2 1 1 155 10 14486711 14486732 TCTTGTCTATTTCCTCATACCC 59 14489977 14489995 AGAACAATCTTAGCCAGGC 59 NA DesignNoJunction Mus musculus 50 Tcp11l2 ENSMUSG00000020034 ENSMUST00000020223 1 1 1 80 10 84067798 84071214 AGGCATGAATAAAGAGACCT 58 84071257 84071275 GCCTTGTTAACTTCAGCAC 59 NA Mus musculus 50 Slc16a7 ENSMUSG00000020102 ENSMUST00000063318,ENSMUST00000105257 3 2 2 82 10 124670542 124670563 GAATGATCTTGGCTTCTTACAG 59 124668444 124670502 GAATGCTAATCCTAAACCTCCA 59 NA Mus musculus 50 Adora2a ENSMUSG00000020178 ENSMUST00000105420,ENSMUST00000020395 3 2 2 64 10 74795879 74795899 GTCAGAAAGATGAGAACTCCA 59 74795925 74795943 GTCCTCAAACAGACAGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Blmh ENSMUSG00000020840 ENSMUST00000021197 3 1 1 81 11 76768096 76779328 ATGGAGGAGATATTCAGAGTG 58 76779370 76779389 TATCTTTGTCTCGGTACTCC 58 NA Mus musculus 50 Polr2h ENSMUSG00000021018 ENSMUST00000021405 3 1 1 148 16 20718973 20719075 GGACTTAGGTGACAAGTTCC 59 20720620 20720638 CGATCCTGTACACTTTCCC 59 NA DesignRelaxed Mus musculus 50 Slc10a1 ENSMUSG00000021135 ENSMUST00000095572 1 1 1 80 12 82057098 82059020 GACTAAATCCAAGCTGCAG 58 82057036 82057055 CATTGAGGATGGTAGAACAG 57 NA Mus musculus 50 Brctd1 ENSMUSG00000021601 ENSMUST00000063291,ENSMUST00000022092 3 2 2 74 13 77264518 77264536 TTGTTCTCCTTGTTAGGGC 59 77245337 77245356 TGGGAATGTTCATCATTCTG 57 NA DesignNoJunction Mus musculus 50 Cartpt ENSMUSG00000021647 ENSMUST00000022150 2 1 1 117 13 100669925 100669943 TCTACGAGAAGAAGTACGG 57 100668896 100668914 GAATTGCAGGAAGTTCCTC 58 NA DesignNoJunction Mus musculus 50 Col4a3bp ENSMUSG00000021669 ENSMUST00000077672,ENSMUST00000109444 3 2 2 80 13 97404925 97405711 GTATGTAGCTAATGTGAACCC 58 97405753 97405771 AACTTAGGGTATTCTCGCT 57 NA Mus musculus 50 Cdadc1 ENSMUSG00000021982 ENSMUST00000056997,ENSMUST00000022555 1 2 2 80 14 60205434 60208632 AGTGAATGCTGGAGTTAACC 59 60205373 60205393 TCAGAACTAGAAGCTTCAGTG 59 NA Mus musculus 50 Bmp1 ENSMUSG00000022098 ENSMUST00000100405 2 1 4 113 14 70889858 70889877 AGTCTGACAATACTGTGTCC 59 70886675 70886693 TCTGCACTCGGAATTTGAG 59 NA DesignNoJunction Mus musculus 50 Fbxl3 ENSMUSG00000022124 ENSMUST00000022720 3 1 1 80 14 103488685 103491534 TGGATCTACCAAAGTCTCAC 58 103488624 103488644 CTATCTTAAGTGAGGACAGGG 59 NA Mus musculus 50 Mcpt2 ENSMUSG00000022226 ENSMUST00000015576 3 1 1 95 14 56661607 56661625 CTAAGAACGGTTCGAAGGA 59 56661683 56662213 TGACACTGATTTCACTTCCA 59 NA Mus musculus 50 Sema5a ENSMUSG00000022231 ENSMUST00000067458,ENSMUST00000100726 1 2 2 80 15 32504712 32504732 CACTTAGCTGTTGATGTTGTG 59 32504771 32538994 CTTAATGGTGCCATAATCTGTG 59 NA Mus musculus 50 Rangap1 ENSMUSG00000022391 ENSMUST00000052374 1 1 1 90 15 81535996 81536099 TCTGCTCAAGAGTGAAGAC 58 81535924 81535942 GAAATAGTCCTGCCTCACC 59 NA Mus musculus 50 Josd1 ENSMUSG00000022426 ENSMUST00000023061 3 1 1 112 15 79507611 79507629 AAAGACAGCACTGGATCTG 59 79506600 79507538 TAGAAATTTCCTGAGCTCACTC 59 NA Nonspecific Mus musculus 50 Gpihbp1 ENSMUSG00000022579 ENSMUST00000023243 3 1 1 85 15 75427510 75427530 CTACAACTACGATGATGACGA 59 75427577 75427954 ATTGTAGAGGTGCTCTGTC 58 NA Mus musculus 50 Ly6g ENSMUSG00000022582 ENSMUST00000023246 1 1 1 75 15 74987231 74988961 GTTATTGTGGACTCTCACAG 57 74988999 74989017 TATTGTCCAGAGTAGTGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pak2 ENSMUSG00000022781 ENSMUST00000023467 1 1 1 80 16 32020343 32021869 ACTGTTACAGCATCCTTTCC 59 32020282 32020300 ATTGCTTCTTTAGCTGCCA 59 NA Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000114001,ENSMUST00000114002,ENSMUST00000064797,ENSMUST00000113999,ENSMUST00000056482,ENSMUST00000113996,ENSMUST00000113993,ENSMUST00000116575,ENSMUST00000023678,ENSMUST00000113986,ENSMUST00000088994 1 11 16 152 16 91849093 91849111 GTGACCGATCTGACATCTG 59 91851063 91851081 TTCTGGCTTCTCGTTTGAG 59 NA DesignNoJunction Mus musculus 50 Rttn ENSMUSG00000023066 ENSMUST00000023828 2 1 1 80 18 89215541 89217767 CTTCTTAGGCATAATCCAAGTC 58 89217807 89217826 GACGTCATCTGTTTCTTCTC 58 NA Mus musculus 50 Sgol1 ENSMUSG00000023940 ENSMUST00000024736 2 1 1 81 17 53820804 53822888 AGTCCTTACAGCAAATTGCT 59 53818999 53819017 GTCTCTGGAGTAACAGCAG 59 NA Mus musculus 50 Trem2 ENSMUSG00000023992 ENSMUST00000024791 2 1 2 85 17 48490508 48491080 CACCTCCAGGAATCAAGAG 59 48491129 48491147 CTGCAAGAAACTTGCTCAG 59 NA Mus musculus 50 1110021J02Rik ENSMUSG00000024018 ENSMUST00000024815 2 1 2 111 17 29841397 29842216 GAGAAAGAGCTAAAGCTGC 58 29837187 29841322 AGGTGTATCGGATAGTCCA 59 NA Mus musculus 50 Slc37a1 ENSMUSG00000024036 ENSMUST00000114536 2 1 1 81 17 31459197 31462615 CTTTCTCATCGAACACCCT 59 31465104 31465123 GTTTATGCCATTCTCAGAGG 58 NA Mus musculus 50 Ralbp1 ENSMUSG00000024096 ENSMUST00000024905 2 1 1 80 17 66207046 66207067 AGATTATGGGAAGTACAGAGGA 59 66203525 66207006 CTTGGTTTCACACTCTTGTC 58 NA Mus musculus 50 Prss28 ENSMUSG00000024171 ENSMUST00000015267 2 1 1 82 17 25446758 25446877 TCACTGCATCCAAAGTCAG 59 25446922 25446941 GTTCCTGCTCCTTATAGAGG 58 NA Mus musculus 50 Dhx16 ENSMUSG00000024422 ENSMUST00000025292 1 1 1 81 17 36021073 36022450 AGTTACAGTGTGGTGATGG 59 36022495 36022513 CGACGTCTTTGATCAATCC 58 NA Mus musculus 50 Pde6a ENSMUSG00000024575 ENSMUST00000025468 2 1 1 80 18 61417903 61417922 GAATCACTTACCACAACTGG 58 61417965 61422085 GTTTCAGCTTTCCTGTCAC 58 NA Mus musculus 50 Txnl1 ENSMUSG00000024583 ENSMUST00000025476 2 1 1 90 18 63836592 63836613 CTTAATGAAAGTGATGAGCACG 59 63835158 63836543 TAATAAGGAGCTGCTCATCAC 59 NA Mus musculus 50 Atg2a ENSMUSG00000024773 ENSMUST00000045351 3 1 1 84 19 6254359 6254377 GTTCATCCTTGATGACTCC 57 6254425 6254603 GACACAGACATAATCTCGC 57 NA Mus musculus 50 Mlana ENSMUSG00000024806 ENSMUST00000025719 2 1 1 68 19 29779189 29781299 GGATACAGAACCTTGATGGA 58 29781330 29781348 TGAGCATCTTTCCCTTGAG 59 NA DesignNoJunction Mus musculus 50 Afap1l2 ENSMUSG00000025083 ENSMUST00000111584,ENSMUST00000086814,ENSMUST00000111583 2 3 3 83 19 56997479 56997497 AGCAACCTTATGAACCTGG 59 56995068 56997432 ATTCAGGTAGCTGGATGTC 58 NA Mus musculus 50 Mrpl43 ENSMUSG00000025208 ENSMUST00000097715,ENSMUST00000052320 2 2 2 74 19 45080424 45080564 TGGCCGAATACCTTAATGG 59 45080368 45080386 CCAACGACTTGATCTCCTC 59 NA DesignRelaxed Mus musculus 50 Dpysl4 ENSMUSG00000025478 ENSMUST00000026551 1 1 1 80 7 146277857 146277875 TACATGTGGACATTCCTCG 59 146277919 146279516 AGGAGTTCACACCTTTGTC 59 NA Mus musculus 50 Tk1 ENSMUSG00000025574 ENSMUST00000106330,ENSMUST00000026661,ENSMUST00000106329 1 3 3 263 11 117678442 117678461 CAAGACAGTAATTGTGGCAG 59 117677356 117677374 TTCTTGTTGTCTGAGCCAG 59 NA DesignNoJunction Mus musculus 50 Nptx1 ENSMUSG00000025582 ENSMUST00000026670 3 1 1 147 11 119404669 119405917 ATTAATGACAAGGTGGCCA 59 119404540 119404558 GATAGGGTGCCAAGTTCTC 59 NA Mus musculus 50 Pard3 ENSMUSG00000025812 ENSMUST00000026921,ENSMUST00000079777,ENSMUST00000108752 2 3 3 80 8 129895707 129895725 TTAGTACCAACGTAGGCAG 58 129895766 129900652 CTTCTGTACCTTTCTTAAGCTG 58 NA Mus musculus 50 Pard3 ENSMUSG00000025812 ENSMUST00000026921,ENSMUST00000079777,ENSMUST00000108752 3 3 3 80 8 129900713 129900732 TCAAGAATATCCTTCCTCGA 57 129900774 129902095 CTCCATTGACCTCTATTAGC 57 NA Mus musculus 50 Fastkd2 ENSMUSG00000025962 ENSMUST00000027103,ENSMUST00000087369 3 2 2 80 1 63797938 63798875 TTCCATGTGATCTTGATCCA 58 63798915 63798936 GATCTTCTTCCTCACAAATGTG 59 NA Mus musculus 50 Ctla4 ENSMUSG00000026011 ENSMUST00000027164 3 1 2 108 1 60969607 60970073 TGTCATTGATCCAGAACCA 58 60970145 60970163 CAAAGAAACAGCAGTGACC 59 NA Mus musculus 50 Col19a1 ENSMUSG00000026141 ENSMUST00000115244 1 1 1 80 1 24536818 24536838 CACCAACTTAGAATCTACTGC 58 24533341 24536777 CTCTGGACACTTAGTAGGTG 58 NA Nonspecific Mus musculus 50 Epb4.1l5 ENSMUSG00000026383 ENSMUST00000052404,ENSMUST00000027632 3 2 2 80 1 121514020 121514142 GAAGGAATACAGAGGTCAGAC 59 121513960 121513979 ACACCATACATTTCTAGCCA 58 NA Mus musculus 50 Sctr ENSMUSG00000026387 ENSMUST00000072886 1 1 1 86 1 121953067 121953085 GTTCTTTGAATTGGCCCTG 59 121958508 121959708 TTCTGAACTTCCAGCTCAC 59 NA Mus musculus 50 Wdr42a ENSMUSG00000026554 ENSMUST00000074144 2 1 1 151 1 174110083 174110103 TACAATCTATGTGAACCCTGC 59 174116494 174116998 ACTCACTGTTCACCAAGTG 59 NA Mus musculus 50 Suv39h2 ENSMUSG00000026646 ENSMUST00000027956,ENSMUST00000060618,ENSMUST00000100458,ENSMUST00000115062 2 4 4 82 2 3375993 3377039 TCAAATGAAAGGTTCTGGAG 57 3375930 3375949 ATTTACATTGGGTTCTGACC 57 NA Mus musculus 50 Frmd4a ENSMUSG00000026657 ENSMUST00000091497,ENSMUST00000115037,ENSMUST00000115042,ENSMUST00000075767,ENSMUST00000115039 3 5 5 90 2 4450844 4450862 GGTGGTGAGAAGTGATCTG 59 4450915 4455604 GACTCTGTCTTCACAGTAGG 59 NA Mus musculus 50 Aldh9a1 ENSMUSG00000026687 ENSMUST00000028004 2 1 1 81 1 169286789 169286808 CAGTTTCTGTGTCATCATCG 58 169286851 169287453 ACATCTCCATGATCTTCACG 59 NA Mus musculus 50 Odf2 ENSMUSG00000026790 ENSMUST00000113767,ENSMUST00000113763,ENSMUST00000113756,ENSMUST00000113757,ENSMUST00000113759,ENSMUST00000113758,ENSMUST00000113755,ENSMUST00000046571,ENSMUST00000028128,ENSMUST00000113762,ENSMUST00000113765,ENSMUST00000113766,ENSMUST00000113764 3 13 13 98 2 29770353 29770371 CTAAAGAAGGCCATCCGAG 59 29770432 29770739 AACATAAAGGTCCTTGTCGG 59 NA Mus musculus 50 Sh3glb2 ENSMUSG00000026860 ENSMUST00000113621,ENSMUST00000100215,ENSMUST00000028214,ENSMUST00000113620 1 4 4 103 2 30201963 30202138 GTACTCATGTGAACCACCT 58 30201878 30201896 TAGCTGTTTCTGCAGATCC 59 NA Mus musculus 50 Rab14 ENSMUSG00000026878 ENSMUST00000113025,ENSMUST00000028238 1 2 2 106 2 35045498 35045516 AGATTTGGGATACAGCAGG 59 35042251 35045430 TGTACTTCTTCTGGTGATGTC 59 NA Mus musculus 50 Fbxo3 ENSMUSG00000027180 ENSMUST00000028603,ENSMUST00000111135,ENSMUST00000111136,ENSMUST00000102565 3 4 4 84 2 103891405 103893533 CCGAATCAGGATTGAAATGTC 59 103893579 103893597 AGCGTTTGTTATCCTCCAG 59 NA Mus musculus 50 Zfp289 ENSMUSG00000027255 ENSMUST00000028691,ENSMUST00000080008 3 2 2 109 2 91115230 91115248 TATGAAGCTAGGTCTCGGT 59 91115321 91115448 CCCAGAGATACAGTTCCTC 58 NA Mus musculus 50 Snx5 ENSMUSG00000027423 ENSMUST00000028909,ENSMUST00000110030 2 2 2 80 2 144080536 144080646 AACTTAGGAAAGTGGAAGGTC 59 144080476 144080495 TGTTGAGCATGTAGTATCGG 59 NA Mus musculus 50 Nkain4 ENSMUSG00000027574 ENSMUST00000103053,ENSMUST00000108870,ENSMUST00000108869,ENSMUST00000029091 3 4 5 89 2 180670709 180670727 TTCATTGGTGGATTTGACC 57 180669725 180670656 TTATGCAGGCAAATATGCC 58 NA Mus musculus 50 Evi1 ENSMUSG00000027684 ENSMUST00000108271,ENSMUST00000108270,ENSMUST00000029230 2 3 3 80 3 29864418 29864437 AGATATTTCCAAGGTCTGCG 59 29862137 29864378 CACAGTATTTGCATCTGTAAGG 59 NA Mus musculus 50 4933434E20Rik ENSMUSG00000027942 ENSMUST00000068798,ENSMUST00000029552 2 2 2 67 3 89860451 89860472 GTTGCTACAACTATCTGTACAG 58 89860500 89862420 ATGAAACGGGATCTCAGAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Reck ENSMUSG00000028476 ENSMUST00000030198 2 1 1 85 4 43955232 43955250 ATACTTGAGCATCGAGTCG 59 43955299 43956031 TATTGCAGGCCTCAATCTG 59 NA Mus musculus 50 Sgip1 ENSMUSG00000028524 ENSMUST00000106882,ENSMUST00000066824,ENSMUST00000106874 1 3 9 165 4 102607168 102607186 CTCGTTTGGTTTGACAGAG 58 102628808 102634990 TAACAATGCACTTGCTTGG 58 NA Mus musculus 50 Fuca1 ENSMUSG00000028673 ENSMUST00000030434 2 1 1 81 4 135489003 135490612 GAAATCATCGAGGAATTGGT 57 135490655 135490674 TCAGACCATCTTTAGTTGGT 58 NA Mus musculus 50 Mknk1 ENSMUSG00000028708 ENSMUST00000019677,ENSMUST00000116300 2 2 4 60 4 115520955 115529642 AAGAACCTTGTGGAGATGG 59 115529666 115529684 TCCTCTTGTCAGAATCCAC 58 NA DesignRelaxed, InUTR Mus musculus 50 Hp1bp3 ENSMUSG00000028759 ENSMUST00000105827,ENSMUST00000105826,ENSMUST00000105825 1 3 4 150 4 137781957 137784570 CATTAAGGCAAGCTTCCAG 58 137784684 137784702 CTGTCTGATGACTCCTCTG 58 NA Mus musculus 50 Sema3c ENSMUSG00000028780 ENSMUST00000030568 1 1 1 84 5 17082779 17159534 ACATTTGATGAGCTTCGAG 57 17159579 17159600 CCATCAGCAATATTCTGTAGTC 58 NA Mus musculus 50 Tnfrsf9 ENSMUSG00000028965 ENSMUST00000030808,ENSMUST00000105671,ENSMUST00000116257,ENSMUST00000105672,ENSMUST00000060901 3 5 5 101 4 150304855 150304874 TACAATCCAGTCTGCAAGAG 59 150304938 150306430 GAACCTGAAATAGCCTGCA 59 NA Mus musculus 50 Tbc1d14 ENSMUSG00000029192 ENSMUST00000101273,ENSMUST00000031094,ENSMUST00000087550 2 3 3 81 5 36867686 36885834 ACCCAGAAGGAATATGAAGAC 59 36867625 36867643 AATCCAGGTTCTTCCTCAC 58 NA Mus musculus 50 Pdgfra ENSMUSG00000029231 ENSMUST00000000476 2 1 1 80 5 75566905 75566923 GAAGGACAACTTGACTCTG 57 75566966 75569422 CTCTGATACCTTGTTTCCTG 57 NA Mus musculus 50 Crybb3 ENSMUSG00000029352 ENSMUST00000076069 3 1 1 85 5 113506693 113507416 GTCCTTTGCACATTGATGG 59 113506626 113506645 ATCTACGATCTCCATCTTGC 59 NA Mus musculus 50 Afm ENSMUSG00000029369 ENSMUST00000113179 1 1 1 80 5 90951251 90951269 AGTCATGCTGGATTACAGG 59 90951313 90952770 TGGATAGCGTCATTAGCTG 59 NA Mus musculus 50 Rpo1-3 ENSMUSG00000029642 ENSMUST00000110557 2 1 2 78 5 147912817 147912835 GGAATTGCTAAAGGAGGCA 59 147912877 147922239 AAGAGGACACTTCATCCAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Srcrb4d ENSMUSG00000029699 ENSMUST00000054895 2 1 4 224 5 136438137 136438155 GCTGCTAGTGATTGGTAGG 59 136437018 136437036 CCTAGGAAGAGTTCTACGC 58 NA DesignNoJunction, InUTR Mus musculus 50 Cml4 ENSMUSG00000030004 ENSMUST00000032073 1 1 1 81 6 85780611 85780629 ATGTTGTCCTTGTGACTGG 59 85780548 85780566 GATTCACCTGTCTTCTGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Klrk1 ENSMUSG00000030149 ENSMUST00000095412,ENSMUST00000032252 2 2 2 81 6 129566736 129566754 CTTGGCAATTCGATTCACC 59 129566337 129566691 CTTGTTGCACAATACTGGC 59 NA Mus musculus 50 Erc1 ENSMUSG00000030172 ENSMUST00000079582 3 1 4 66 6 119774434 119774453 AAATCACCATTTGGAAGGAG 58 119747325 119774405 ATTGTCATCTGCATGTGCT 59 NA DesignNoJunction Mus musculus 50 Kras ENSMUSG00000030265 ENSMUST00000032399,ENSMUST00000111710,ENSMUST00000111709,ENSMUST00000032397 2 4 4 92 6 145182936 145195223 ACGATAGAGGACTCCTACAG 59 145182863 145182881 ACTGTACTCCTCTTGACCT 59 NA Mus musculus 50 Etnk1 ENSMUSG00000030275 ENSMUST00000032413 2 1 1 82 6 143129300 143129320 TGTGCTATGAGTTTATCCAGG 59 143129364 143133108 CTGACGAGCTATTAGCCTG 59 NA Mus musculus 50 Creld1 ENSMUSG00000030284 ENSMUST00000032422 3 1 1 181 6 113441976 113442128 GTGCCTAGATGTGGATGAG 59 113442701 113442719 TTTCATCCTCCGTCATCTC 58 NA Mus musculus 50 Clec2i ENSMUSG00000030365 ENSMUST00000032519 1 1 1 103 6 128845444 128846441 AACAACATGAATCCCATCCT 59 128846507 128846525 TTGCTACAGATCCACATCC 59 NA Mus musculus 50 Isg20l1 ENSMUSG00000030609 ENSMUST00000107425,ENSMUST00000107421,ENSMUST00000107427,ENSMUST00000051175,ENSMUST00000107423 2 5 5 235 7 86040900 86050747 GATCCTTAAGCTGTTGAAGG 58 86052045 86052063 CATCTTCCACAGATGAGTG 57 NA DesignNoJunction Mus musculus 50 Arhgap4 ENSMUSG00000031389 ENSMUST00000114405,ENSMUST00000114407,ENSMUST00000114406,ENSMUST00000114398,ENSMUST00000064376,ENSMUST00000114404 3 6 7 88 X 71145796 71145981 CAGAAGAGGTGAATAAGACAC 58 71145728 71145746 CAAAGAGTCCAGTATGTCC 57 NA Mus musculus 50 Cd209d ENSMUSG00000031495 ENSMUST00000011445,ENSMUST00000111028 2 2 2 82 8 3873842 3876265 GATGAGGAGCAGACTTTCC 59 3873778 3873798 GCTTCATTATGCATGTCTGAG 59 NA Mus musculus 50 Wwc2 ENSMUSG00000031563 ENSMUST00000057561 3 1 1 80 8 48949289 48949420 GCAGATAGGACTCAGATACG 59 48949228 48949247 GAGAAGGCATGAAGATTTCG 58 NA Mus musculus 50 Sorbs2 ENSMUSG00000031626 ENSMUST00000037085,ENSMUST00000067107,ENSMUST00000067065,ENSMUST00000098788 2 4 4 81 8 46909118 46909136 AAGATGAGCTGGAACTCAG 58 46909181 46911108 CTTGAAGTTCCCACAAACC 58 NA Mus musculus 50 Irf2 ENSMUSG00000031627 ENSMUST00000034041 2 1 1 92 8 47923116 47923134 CACTGAGAGTGATGACCAG 59 47923190 47930190 TCGGTAGTTTCGCTTTCTG 59 NA Mus musculus 50 Pdlim3 ENSMUSG00000031636 ENSMUST00000034053 1 1 1 80 8 46985905 46993833 GAACCACAGGAATTCAAACC 59 46993876 46993894 GTCATCAATGTTTGCTGCT 59 NA Mus musculus 50 Brd7 ENSMUSG00000031660 ENSMUST00000034085 3 1 1 81 8 90863357 90863376 ATGGCAGATAGTTTACTGGA 58 90861024 90863313 CTTCAGGAGATGACATGTC 57 NA Mus musculus 50 Slc12a3 ENSMUSG00000031766 ENSMUST00000034218 1 1 1 80 8 96859244 96859262 TGTTCTCCATCTTCTTCCC 58 96859306 96863591 CTACAGCAGGATCCTTGAG 59 NA Mus musculus 50 2310065K24Rik ENSMUSG00000031774 ENSMUST00000034226 1 1 1 91 8 97106906 97111236 GAAGGAGTACAGAAGTAATCTC 57 97106836 97106854 TGGTTTCTATGGGTTTCAC 57 NA Mus musculus 50 Bcmo1 ENSMUSG00000031845 ENSMUST00000034308 1 1 1 81 8 119632610 119632628 AGACTTCTATGCAACCACG 59 119632671 119634781 GTAATCAACCTTCTCCAAGGT 59 NA Mus musculus 50 4931429I11Rik ENSMUSG00000032023 ENSMUST00000034521 3 1 1 81 9 40719069 40719088 TAGTAATTCGGAAGGCTACC 58 40706360 40719025 CAGCTTGGAACTCTTTGTG 58 NA Mus musculus 50 Brunol6 ENSMUSG00000032297 ENSMUST00000034840 1 1 1 104 9 59452824 59452842 TTCAAATCGGCATGAAGAG 58 59452909 59453795 CTTCAGTTTCTGTCTGTGAC 58 NA InUTR Mus musculus 50 Cck ENSMUSG00000032532 ENSMUST00000060307 1 1 2 280 9 121403641 121404724 CATCCAAAGCCATGAAGAG 58 121402594 121402612 TAATCCAGCTCTACTGGTC 57 NA DesignNoJunction, InUTR Mus musculus 50 Eml4 ENSMUSG00000032624 ENSMUST00000049503,ENSMUST00000096766,ENSMUST00000112363,ENSMUST00000086525 1 4 4 80 17 83845331 83845349 ACACTGCATGTTATTGGAC 58 83845393 83847514 ATGAACACCTGAATCTGCT 58 NA Mus musculus 50 Pkd1 ENSMUSG00000032855 ENSMUST00000035565 1 1 1 80 17 24718381 24718518 TCTTTCCTGAACCATCTGC 59 24718562 24718580 CCATGACCACATAGGTCAC 59 NA Mus musculus 50 Nfyc ENSMUSG00000032897 ENSMUST00000097906 1 1 4 87 4 120454130 120462982 GAAAGATTTCCGAGTACAGG 57 120446358 120454082 GGCAATATCATTCCTCTTCAC 58 NA Nonspecific Mus musculus 50 Gas7 ENSMUSG00000033066 ENSMUST00000108681,ENSMUST00000041611,ENSMUST00000108682,ENSMUST00000108680 2 4 4 113 11 67416709 67416727 TATGTCAACACGACTACCA 57 67443183 67456793 GTATCCATTCACTGTTGTAGG 58 NA Mus musculus 50 Ttll4 ENSMUSG00000033257 ENSMUST00000042125 1 1 1 110 1 74732957 74733785 AGCATCAGAAGCTAAACCA 58 74733859 74733877 AACTGAACTCCTTCTTGCC 59 NA Mus musculus 50 Rpap1 ENSMUSG00000034032 ENSMUST00000110793,ENSMUST00000048493,ENSMUST00000099529 1 3 3 82 2 119597530 119597548 GAGATTCTGACCACTGAGG 59 119597082 119597484 TACAGCTCCCTGTAAAGGT 59 NA Mus musculus 50 Zfp418 ENSMUSG00000034538 ENSMUST00000051435 2 1 1 105 7 7124879 7127277 GTATACAGGGCTGTGTAACC 59 7127343 7127363 AGCATCACATCAAGATACAGG 59 NA Mus musculus 50 Grn ENSMUSG00000034708 ENSMUST00000049460 1 1 1 84 11 102296072 102296090 TGATCCAGAGTAAGTGCCT 59 102296138 102296388 CACTTCACCTCCTTCACTG 59 NA Mus musculus 50 Kri1 ENSMUSG00000035047 ENSMUST00000038671 1 1 1 87 9 21089685 21089704 GTCATCTTGGAGAAAGGAGG 59 21086530 21086623 TTGTGGATGTTTCCTGGAG 59 NA Mus musculus 50 Rims4 ENSMUSG00000035226 ENSMUST00000109391,ENSMUST00000044734 1 2 2 170 2 163744327 163744345 CTCCTTCGATGATGAGGAC 59 163691632 163704839 TAGTTAAGGTTGCCCTCTG 58 NA Mus musculus 50 A930041I02Rik ENSMUSG00000035236 ENSMUST00000038874,ENSMUST00000090983 1 2 2 80 2 38935686 38935901 TTCAATAGATCAGGCCTTCC 59 38935625 38935643 GCTGAACAGAAGACAAACC 58 NA Mus musculus 50 Zcchc6 ENSMUSG00000035248 ENSMUST00000079643,ENSMUST00000071703 1 2 2 81 13 59916307 59916916 AAGCTACCAGACTGTTCTC 58 59916244 59916263 CATCAATGTTCACGTCAGAG 58 NA Mus musculus 50 Impg2 ENSMUSG00000035270 ENSMUST00000069778 1 1 3 263 16 56204716 56205209 TGTATCAGCCTCAGAAGAG 58 56211344 56211362 TTCTTGTCAGTTGTGGGTC 59 NA DesignNoJunction Mus musculus 50 Pmch ENSMUSG00000035383 ENSMUST00000048621 1 1 1 232 10 87554123 87554443 ATTCAAAGAACACAGGCTC 57 87554892 87554910 GACTCTTCCCAGCATACAC 59 NA DesignNoJunction Mus musculus 50 Ccr3 ENSMUSG00000035448 ENSMUST00000039171 2 1 1 60 9 123943376 123943395 AGATGAAATCAAGACTGTGG 57 123943417 123943436 TGCCCACTCATATTCATAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pim3 ENSMUSG00000035828 ENSMUST00000042818 1 1 1 60 15 88693960 88694746 GTCTACACTGACTTTGATGG 57 88694769 88694787 GGTGATATCGGATCCACTC 59 NA DesignNoJunction Mus musculus 50 6330500D04Rik ENSMUSG00000036006 ENSMUST00000091694 1 1 5 194 13 24706562 24706580 CAATTCCTTGACCCTGAGG 59 24761950 24763636 GAAGGAGTTACACCTGGAC 59 NA Mus musculus 50 Meox2 ENSMUSG00000036144 ENSMUST00000041183 1 1 1 80 12 37894004 37894024 GCCCATCATAATTATCTGACC 58 37894065 37904748 CACTTTCACCTGTCTTTCAG 58 NA Mus musculus 50 4933433C11Rik ENSMUSG00000036770 ENSMUST00000043774,ENSMUST00000114363 1 2 2 119 2 25069779 25069797 ATGAGTCCACACCTATCAG 58 25069585 25069603 GAGACATATTGGGCACCTC 59 NA DesignNoJunction Mus musculus 50 Unc93b1 ENSMUSG00000036908 ENSMUST00000041089 2 1 1 82 19 3942004 3942354 ATAGCTTCTTCCACTTGAGC 59 3942399 3942417 GTGGTTCAGGTCATACAGG 59 NA Mus musculus 50 AY078069 ENSMUSG00000036931 ENSMUST00000108176,ENSMUST00000108175,ENSMUST00000046177 1 3 3 98 7 31211201 31211219 CAAGGATGCAGAATTCCCA 59 31211281 31212102 TGTTGCTCTTGATCTCCTG 59 NA Mus musculus 50 Sep15 ENSMUSG00000037072 ENSMUST00000082437 3 1 1 80 3 144257906 144259797 CAGATCAAGTATGTTCGAGG 57 144259840 144259858 GATGCTTAGTTCTTCAGCA 57 NA Nonspecific Mus musculus 50 Prf1 ENSMUSG00000037202 ENSMUST00000035419 1 1 1 61 10 60763171 60763189 GAAGACCTATCAGGACCAG 58 60763214 60765550 AACTGTACATGCGACACTC 59 NA DesignNoJunction Mus musculus 50 Kcnh3 ENSMUSG00000037579 ENSMUST00000041415,ENSMUST00000088254 1 2 2 100 15 99064540 99068516 CATTCTAGGGAAGGGTGAC 59 99068580 99068598 GTAGGACGCAGTATGTCAG 59 NA Mus musculus 50 Prkci ENSMUSG00000037643 ENSMUST00000046401,ENSMUST00000108249 1 2 2 80 3 30940443 30942622 AAGATTATGGCTTCAGCGT 59 30942666 30942684 TATCAAACGGAGACCTTCC 58 NA Mus musculus 50 Tmem33 ENSMUSG00000037720 ENSMUST00000113680,ENSMUST00000037918 3 2 2 84 5 67654988 67655006 AATTGGACACAGCAATGTG 58 67655054 67655517 TCATGCAACCCAAGAAGAG 59 NA Mus musculus 50 D630003M21Rik ENSMUSG00000037813 ENSMUST00000103121,ENSMUST00000046944 1 2 2 80 2 158031527 158034159 AGTTCTTCCAGAAACTGGAC 59 158031466 158031484 CAAACTCTTGGATGGAAGC 58 NA Mus musculus 50 Rcor1 ENSMUSG00000037896 ENSMUST00000116388,ENSMUST00000084968 3 2 2 85 12 112341944 112341962 GTCTGCTAATGCTACTGCT 59 112342010 112346795 TGATGTTCTGAATCTGTCGT 59 NA Mus musculus 50 Tmem16b ENSMUSG00000038115 ENSMUST00000067267,ENSMUST00000041000,ENSMUST00000100935 2 3 3 80 6 125740347 125740365 CTGAACACAGCAACAACAG 59 125740408 125743591 TTTCCTGGATGTTGTACAGG 59 NA Mus musculus 50 5033430I15Rik ENSMUSG00000038152 ENSMUST00000038032 1 1 1 66 13 46061471 46061490 GAAGAACTCTTCTCTGGAGG 59 46061519 46061537 TGTGATGGCTCTTCTTTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 D1Ertd53e ENSMUSG00000038174 ENSMUST00000097724,ENSMUST00000038372 1 2 2 80 1 58609168 58614129 ATTCAAACAATGAGCTCCTG 58 58609107 58609127 ACCTCTTAAGTCGAACTTCAG 59 NA Mus musculus 50 Pnmt ENSMUSG00000038216 ENSMUST00000041301 2 1 1 184 11 98248844 98248970 CATTGAGGACAAGGGTGAG 59 98249118 98249136 AGCTAGTAAGATCTGGGCT 59 NA Mus musculus 50 Mlxip ENSMUSG00000038342 ENSMUST00000111596,ENSMUST00000068237 2 2 2 84 5 123893135 123893153 TCAGAATTCAGCGACACTC 59 123893200 123893893 CCAGATGTGCTATTTCTCGT 59 NA Mus musculus 50 Tcfl5 ENSMUSG00000038932 ENSMUST00000037877 1 1 1 86 2 180375059 180375077 TTGAGTCCACCAAACAGAC 59 180373341 180375009 TACATAGCGCTTCTTCTCC 58 NA Mus musculus 50 Svs1 ENSMUSG00000039215 ENSMUST00000037696 1 1 1 107 6 48940969 48940987 ACCATTCTGAGATTGTCCC 58 48941057 48941585 TTGGAGAGGCTGTATATCTC 57 NA Mus musculus 50 Sectm1b ENSMUSG00000039364 ENSMUST00000039309,ENSMUST00000081499 1 2 2 86 11 120917280 120917529 CCTATAACCATGTCTGGGAC 59 120917213 120917231 TATTACAGGCCATCACCAC 59 NA Mus musculus 50 Ppp2r4 ENSMUSG00000039515 ENSMUST00000042055,ENSMUST00000113603 1 2 3 112 2 30271850 30281936 CAGATTCTTCAGAAGAGACCC 59 30282010 30283847 GTCAGCATATGCCTGAGAG 59 NA Mus musculus 50 Ralyl ENSMUSG00000039717 ENSMUST00000081617 1 1 2 163 3 13777026 13777044 TTCAGTACATGAGTGAGCG 59 14039781 14081217 TGATTCAAGCCTGTACAGG 59 NA Mus musculus 50 Rhbdd2 ENSMUSG00000039917 ENSMUST00000043707 2 1 1 97 5 136115075 136115094 TTCTTCTGCCGAAAGAAGAG 59 136118943 136118961 AACTTGGAGTCAGATGAGG 58 NA DesignNoJunction Mus musculus 50 9530096D07Rik ENSMUSG00000039999 ENSMUST00000040411 3 1 1 68 4 131858506 131858524 TTTGAACACATCCAAGCCT 59 131858456 131858475 TAAGAAGACCACCTTGTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ipo8 ENSMUSG00000040029 ENSMUST00000048418,ENSMUST00000111575 3 2 2 80 6 148747195 148747214 CATCCAGAAGCTCATATGTG 58 148745278 148747152 AATATCTCAGCCAAGTGCT 58 NA Mus musculus 50 Zfp704 ENSMUSG00000040209 ENSMUST00000041124 1 1 1 289 3 9452352 9470899 AGAGAAAGAACTCCATGAAGG 59 9447362 9447380 ACAAGGAGTTTCTGTTCGG 59 NA DesignRelaxed Mus musculus 50 Syngr4 ENSMUSG00000040231 ENSMUST00000039049 2 1 1 68 7 53151064 53151082 CATCTCAAGGATCTTCGGA 58 53144173 53144194 TGGTAACCATCAGTTAGTAGAG 58 NA DesignNoJunction Mus musculus 50 Parc ENSMUSG00000040327 ENSMUST00000066026,ENSMUST00000113441 1 2 2 86 17 46659128 46659146 CTTCTACACAATTCGGGCA 59 46658925 46659079 CTGTTCAGTCTCGGATAGAG 58 NA Mus musculus 50 Cbln3 ENSMUSG00000040380 ENSMUST00000063871 1 1 1 141 14 56502408 56502751 CAGGTACTGGTCAATGAGG 59 56501996 56502014 TGTTCAGCATCAGACTCAC 59 NA DesignNoJunction Mus musculus 50 OTTMUSG00000005148 ENSMUSG00000040978 ENSMUST00000043285 1 1 1 83 11 8956574 8959924 AGAGAAAGGTGAAACTGCC 59 8959971 8959989 TCCTTTCAGGCTCTTTGTG 59 NA Mus musculus 50 Ripk2 ENSMUSG00000041135 ENSMUST00000037035 2 1 1 80 4 16056245 16059933 GAAAGCAAAGATACAGAGTTCC 59 16056186 16056205 TTTGCAGGTATGTTTAGCGA 59 NA Mus musculus 50 Arhgap12 ENSMUSG00000041225 ENSMUST00000062584,ENSMUST00000077128 1 2 2 81 18 6039448 6049287 TAGTACAAGCTGGTTTGGG 59 6039385 6039404 TGATGCCATTTCAATCACTG 58 NA Mus musculus 50 Smpx ENSMUSG00000041476 ENSMUST00000038007,ENSMUST00000112521 2 2 3 94 X 154137219 154137237 CAGGCAGTAAACCAATCCA 59 154140937 154152529 TTGATATTCGCCTGGATGG 59 NA InUTR Mus musculus 50 Eif2c1 ENSMUSG00000041530 ENSMUST00000097888 1 1 1 80 4 126126061 126126080 CATCTCAAGAACACCTACTC 57 126120474 126126019 TTTCACTTCAGCATACACTG 58 NA Mus musculus 50 Iapp ENSMUSG00000041681 ENSMUST00000041993 2 1 1 89 6 142247371 142247389 GATGTGCATCTCCAAACTG 58 142247442 142251834 TTGCTACCACTTCTGACAG 59 NA DesignRelaxed Mus musculus 50 Fhdc1 ENSMUSG00000041842 ENSMUST00000091002,ENSMUST00000107689,ENSMUST00000107688 3 3 4 119 3 84278151 84278169 AAGAAGACCATTGAGGAGC 59 84269394 84278068 CAAGACGGTAACCTCTTCC 59 NA Mus musculus 50 Svop ENSMUSG00000042078 ENSMUST00000058472 2 1 1 91 5 114481644 114482728 TGCATTGGAAGAAATGTGC 59 114481571 114481589 TCAGGCGTGTAAACATAGG 59 NA Mus musculus 50 Tmem183a ENSMUSG00000042305 ENSMUST00000116530 3 1 2 81 1 136252287 136257349 AGCAAGAGACATAAAGACCC 59 136252225 136252243 GACGGATATAGGAAGCCAG 59 NA Mus musculus 50 Mapk6 ENSMUSG00000042688 ENSMUST00000049355 1 1 1 80 9 75241218 75241239 CATTAGAAACGACATGACTGAG 59 75238163 75241177 AGGAAATCCAGTGCTTCTC 59 NA Mus musculus 50 Ttc9 ENSMUSG00000042734 ENSMUST00000036116 1 1 1 103 12 82761645 82761663 CTTTACAGGTCTGGTGTGG 59 82761730 82764515 ATCACATTGGTGTCTGTGG 59 NA Mus musculus 50 Smg7 ENSMUSG00000042772 ENSMUST00000111836,ENSMUST00000073441,ENSMUST00000043560 3 3 3 80 1 154703736 154706024 GGAAGAACAGTTTAAGAGACTG 58 154703677 154703696 AACAGGTTAATGACAGTGAC 57 NA Mus musculus 50 4833436C18Rik ENSMUSG00000042788 ENSMUST00000107931 1 1 4 181 4 43440660 43440679 CCACAAGTTCTTCATGTCAG 58 43440134 43440393 AACTTATATCCTGGCACGT 58 NA Mus musculus 50 Serpinb6b ENSMUSG00000042842 ENSMUST00000110293,ENSMUST00000017184 3 2 2 89 13 33060470 33060488 CTATAAGCGTCTCCTCAGC 59 33060541 33063355 TATCCAAAGACAGTGCCTG 59 NA Mus musculus 50 Lhfpl4 ENSMUSG00000042873 ENSMUST00000060787 2 1 1 124 6 113126536 113126554 TACATTCTGGCCATCATCG 59 113121943 113126449 CCCACGAAATCTTTGTTCTC 59 NA Mus musculus 50 ENSMUSG00000043661 ENSMUSG00000043661 ENSMUST00000062642 3 1 1 62 X 100721364 100721382 GATGTTTCCAGAGTGGAGG 59 100721320 100721338 AATTACAGGAGAGGCTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zmym1 ENSMUSG00000043872 ENSMUST00000055013,ENSMUST00000106102,ENSMUST00000106099 1 3 3 80 4 126728661 126731461 GACATCTACTAAACCGCCC 59 126728599 126728620 GTAATCGCAATCATCTCATCTG 59 NA Mus musculus 50 NM_134174.2 ENSMUSG00000044089 ENSMUST00000059171 3 1 1 61 6 56936109 56936130 TCCAGTAATCCTTACTGTTCAG 59 56936152 56936170 CCAAAGGAGTAATTGTGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 1810024B03Rik ENSMUSG00000044145 ENSMUST00000056146 1 1 1 60 2 127012822 127012842 TTGGCTGTCAACTATATCCAC 59 127012782 127012800 TGTTCTCAGCCTTGATGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Il20rb ENSMUSG00000044244 ENSMUST00000093793 2 1 3 81 9 100368862 100373431 TTAACCGAAATGCAACTGTC 59 100368800 100368818 TCTTCCAGCTCAATAACCA 58 NA Mus musculus 50 Q4VAB4-2 ENSMUSG00000044681 ENSMUST00000094937 3 1 1 132 5 28535664 28535682 CAGACCTTTGAAATTCGCG 59 28533810 28533829 TACATCAGACACAGTACCTG 58 NA DesignNoJunction Mus musculus 50 Krt32 ENSMUSG00000046095 ENSMUST00000107419,ENSMUST00000007320 3 2 2 80 11 99946149 99946250 TTCAATATGCAGATGGAGGA 58 99946088 99946107 AATGATGTCTGATTGGTAGC 57 NA Mus musculus 50 Cxxc5 ENSMUSG00000046668 ENSMUST00000060722 1 1 1 95 18 36019064 36019083 TCAGAAAGTGTGAAGAACTC 57 36020334 36020352 GAAATCACTGAAACCACCG 59 NA DesignNoJunction, InUTR Mus musculus 50 V1ri9 ENSMUSG00000046932 ENSMUST00000057516 1 1 1 60 13 22311524 22311542 TTGTATGCAGTCATCATGG 57 22311482 22311500 CCAAGTGGATGAGAATGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tspyl1 ENSMUSG00000047514 ENSMUST00000061372 1 1 1 60 10 34002818 34002836 GTACGTAACCAGTCTGGAG 59 34002860 34002878 CTTGAATTTGCAGCCAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr820 ENSMUSG00000048745 ENSMUST00000059244 2 1 1 60 10 129454545 129454564 ATCATTCTCTTGACTCTGCT 58 129454584 129454605 TTCGGAGGAAGAAATACATAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Centb2 ENSMUSG00000049076 ENSMUST00000058033,ENSMUST00000100008 1 2 2 81 16 31127512 31131356 TCCAGCAGAAGGATTTCTC 58 31127449 31127467 TACCCTTCCATGACAATGC 59 NA Mus musculus 50 Plcxd3 ENSMUSG00000049148 ENSMUST00000061925 1 1 2 86 15 4467306 4467325 TCAGAGAAACAATCACAGAG 57 4524770 4524788 CAATATTGATGCCGCTCTC 58 NA DesignNoJunction Mus musculus 50 NM_146718.2 ENSMUSG00000050134 ENSMUST00000055873 3 1 1 60 1 175999552 175999574 GTAATATGCTCATCTTCCGTC 58 175999596 175999614 AGTGGTACATGGGTTTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cd14 ENSMUSG00000051439 ENSMUST00000061829 3 1 1 60 18 36885850 36885869 GGAATACCTTCTAAAGCGTG 58 36885809 36885829 GATAATATCAGTGAACTGCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mafg ENSMUSG00000051510 ENSMUST00000058162,ENSMUST00000106182,ENSMUST00000106181,ENSMUST00000106180 1 4 4 126 11 120491048 120491147 AAACAAGGCCTTAAAGGTG 58 120490940 120490958 GATCTCTTCCTTGGAGAGG 58 NA DesignNoJunction Mus musculus 50 Ccnb3 ENSMUSG00000051592 ENSMUST00000115752,ENSMUST00000056725,ENSMUST00000115753 3 3 3 80 X 6562685 6563407 AGATATGCTTCGTGCATCC 59 6562623 6562643 ATATTCTTGCAGGGTCATCTC 59 NA Mus musculus 50 Klhdc1 ENSMUSG00000051890 ENSMUST00000063445 2 1 1 84 12 70369302 70370820 TTCTTGGATACAGGTCACTG 59 70384120 70384139 CAATGCAGTCAAGACATGAC 59 NA Mus musculus 50 8030423F21Rik ENSMUSG00000052295 ENSMUST00000064097 2 1 1 81 5 53001348 53004398 TGACTTTGTACAGACATTCCC 59 53001287 53001305 GGTGACAGGAGAGTAACAG 59 NA InUTR Mus musculus 50 Lrrc33 ENSMUSG00000052384 ENSMUST00000115165,ENSMUST00000099991,ENSMUST00000115163 2 3 3 60 16 32143761 32143780 CTGAAGGCATTACAAGACTG 58 32143720 32143741 TAGACAGGTCTAAATGAGTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nfib ENSMUSG00000052747 ENSMUST00000064770 3 1 1 61 4 81936683 81936703 TCTGTCACTGAGAACTTTGAG 59 81936642 81936663 AGAGAAATATCATTGAGGTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tnks ENSMUSG00000053051 ENSMUST00000065259 2 1 1 62 8 35891423 35891441 ATCCTGTGTTTCTGTTGGG 59 35891379 35891400 TGCTGAGTGATTCTATAGTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lins2 ENSMUSG00000053091 ENSMUST00000077967,ENSMUST00000065323 1 2 2 82 7 73855559 73855578 AGCAGCAAGCTTAATTACAG 58 73855623 73856767 GCAAGGCAACTTTCATCTC 59 NA Mus musculus 50 4930432O21Rik ENSMUSG00000053347 ENSMUST00000055349 1 1 1 90 17 22127799 22127817 ATATCTTGACCGTGCTCAG 59 22127869 22129075 AGTTAAGTAATGGCTCTCCAC 59 NA Mus musculus 50 4930563E22Rik ENSMUSG00000053574 ENSMUST00000066087 3 1 1 258 11 72029065 72029083 CTCAGTTCCTTGAGGTGTC 59 72029302 72029323 CACTGATTTATGGGTTCTTTCC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 9430021M05Rik ENSMUSG00000054457 ENSMUST00000067526 1 1 1 222 2 162491558 162491576 AATCACCTTGCTGTCTACG 59 162492126 162492144 AGGTGTCTAGGAGATCTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Adam12 ENSMUSG00000054555 ENSMUST00000067680 2 1 1 81 7 141173141 141173159 GTCACAGCATAACAAGTCC 58 141167203 141173096 TCTCTTATGCCTTCTTGCC 59 NA Mus musculus 50 5830411N06Rik ENSMUSG00000054672 ENSMUST00000059882 1 1 2 104 7 147434084 147434102 AATCCACCTTCTTGGAGTG 59 147434170 147434737 TTTGTAGTGTGGTACCACC 59 NA DesignNoJunction Mus musculus 50 Cdca7 ENSMUSG00000055612 ENSMUST00000069280 3 1 2 187 2 72317766 72319756 AGATGGAATGAGACTGCAG 59 72319906 72319925 CTTCTTCAGAGTCAGAGTGG 59 NA Mus musculus 50 4931431F19Rik ENSMUSG00000055643 ENSMUST00000053743 1 1 1 60 7 111277230 111277249 AGGGCATAGTTTCAAGTCAG 59 111277189 111277209 GAGTGTAAGTCTAGCATACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 E030030I06Rik ENSMUSG00000055657 ENSMUST00000069372 2 1 2 116 10 21868373 21868391 GAGTACAGACCAGTGAGGA 59 21864301 21864319 CTGAGCAAACAGGTTTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000055790 ENSMUSG00000055790 ENSMUST00000069526 1 1 1 60 11 120240527 120240545 TGTGATTCTACAGCAGAGG 58 120240569 120240587 ATGTGGTTTCCCTTAGACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 6030429G01Rik ENSMUSG00000055809 ENSMUST00000094897 2 1 1 141 7 4475452 4475548 ATTAGCTCGGTACTTGGTG 59 4475329 4475347 TAACTTGTAGAACCTCGCA 58 NA Mus musculus 50 2900064A13Rik ENSMUSG00000055943 ENSMUST00000069747 2 1 1 85 2 112299667 112299686 TGGAAGTTATTTCTCCTGCT 58 112299734 112302973 ATTCACATATCTTGCTCGC 57 NA Mus musculus 50 Socs6 ENSMUSG00000056143 ENSMUST00000070104 2 1 1 61 18 89023384 89023405 GGAGCTATCAAAGAGTGTACTC 59 89023344 89023363 GGTGAAGAGCCATCTAACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000010671 ENSMUSG00000056300 ENSMUST00000105735 3 1 1 91 4 145662607 145665893 CTCCACAGGATCTGTTAACC 59 145662535 145662553 GTACAATGTCCTCTGAGCA 58 NA Nonspecific Mus musculus 50 OTTMUSG00000007191 ENSMUSG00000056411 ENSMUST00000070502 1 1 1 278 3 107889471 107889489 AATCAATTAGGGATCCGGC 59 107889731 107889749 ACTGATGAGGAAACTGACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pign ENSMUSG00000056536 ENSMUST00000070699,ENSMUST00000073314,ENSMUST00000112808,ENSMUST00000112806 2 4 4 85 1 107454659 107462734 TAAGCACTGGGTATGAAGC 59 107454592 107454610 TTGAAGGGTCTCTTGTTCC 59 NA Mus musculus 50 Dnahc9 ENSMUSG00000056752 ENSMUST00000080665,ENSMUST00000108691 2 2 4 80 11 65958789 65958807 GGATTTCCAAGCATCTCTG 58 65947205 65958745 GTCTTCAGAAGATCCTCCA 57 NA Mus musculus 50 NP_001074715.1 ENSMUSG00000056912 ENSMUST00000041162 1 1 1 80 10 100057782 100064511 AAGTAGCAATACCACCTTACAG 59 100064551 100064570 ATGGGTTTCAGAGATTCCTG 59 NA Mus musculus 50 Cml1 ENSMUSG00000057103 ENSMUST00000074332 1 1 1 78 6 85860913 85860931 TATCACATCCGACAGTACC 58 85860853 85860871 GAATGTACTCCTCCATGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr804 ENSMUSG00000057403 ENSMUST00000077312 1 1 1 60 10 129142736 129142755 TGTGTCTAAAGGTGTAGCTC 59 129142776 129142796 AATGAAAGGATTCAGGAGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zbtb8os ENSMUSG00000057572 ENSMUST00000048467,ENSMUST00000106047 1 2 2 128 4 129019044 129019064 GCTGATGAGTACTTCATACCC 59 129021488 129024062 CTTGACTTCTGTTCCCTGAG 59 NA Nonspecific Mus musculus 50 Nap1l1 ENSMUSG00000058799 ENSMUST00000065917 1 1 1 82 10 110931859 110931877 AGAAGGTGAAGAAGCTGAC 59 110932423 110933105 TCTGATCCTTCTTTGGGTC 58 NA Mus musculus 50 Kcnc1 ENSMUSG00000058975 ENSMUST00000098442,ENSMUST00000025202 2 2 2 60 7 53683182 53683201 TGCTGCTTATCATCTTCCTG 59 53683224 53683242 GCGTAGTAGATCATGGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Clec4a4 ENSMUSG00000059639 ENSMUST00000079379 3 1 1 106 6 122963876 122973922 AATAAGAGTGCTACGTTCTG 57 122973991 122974009 CAAGGGATATCATTCCAGC 57 NA Mus musculus 50 OTTMUSG00000002206 ENSMUSG00000059845 ENSMUST00000078442 3 1 1 93 11 99741115 99741133 TAACTGCTCCCAATCTTGC 59 99741190 99741208 ACAGGATGATTGTGTTGGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Olfr105 ENSMUSG00000060137 ENSMUST00000113642,ENSMUST00000073218 3 2 2 60 17 37519971 37519991 TTCACTCCATAATGACGTCTC 59 37520013 37520031 AAGAAATGATGGATGCGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 V1ri5 ENSMUSG00000060490 ENSMUST00000074992 1 1 1 60 13 23229177 23229195 GTTATGCTAGTTTCAGCCC 58 23229218 23229237 AAGACATTAGGAGGATGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Taar7f ENSMUSG00000060825 ENSMUST00000071691 3 1 1 66 10 23769974 23769992 TATTTCTCATTCCCACCCT 57 23770022 23770040 TGCTGTTTAGCAATGAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr51 ENSMUSG00000060918 ENSMUST00000076514 1 1 1 60 11 50820555 50820574 TGTTTGGGTTGTTCTTATGG 58 50820596 50820615 AGGATAATGAGAAGGTTCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Acyp2 ENSMUSG00000060923 ENSMUST00000109438,ENSMUST00000074613 3 2 2 162 11 30532307 30533695 CTTCAGAATGTACACAGAAGG 58 30406397 30406415 GATGCGAGAACTAGGACTC 59 NA Mus musculus 50 Zfp143 ENSMUSG00000061079 ENSMUST00000084727 3 1 2 90 7 117219155 117219173 GTATCCATTGATGGCAGTG 58 117219227 117220586 GGCCTTGTAAGACAATCTG 58 NA Mus musculus 50 ENSMUSG00000061395 ENSMUSG00000061395 ENSMUST00000080727 2 1 1 60 11 117891268 117891286 CAAATGGTCCTCAAAGGGA 59 117891310 117891328 TCACCATCCAATACAGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Opcml ENSMUSG00000062257 ENSMUST00000115243,ENSMUST00000073822 2 2 2 84 9 28482940 28620878 TCATAGTGCAAGTTCCTCC 58 28620926 28620944 AGACATAACAGGGTCACAC 58 NA Mus musculus 50 Olfr1450 ENSMUSG00000062892 ENSMUST00000082006 2 1 1 90 19 13028938 13028959 CCCAGTTGTTTATAGCTTAAGG 58 13029010 13029028 TAGAACTTGGTGTTGAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sox7 ENSMUSG00000063060 ENSMUST00000079652 3 1 1 84 14 64562761 64562779 AAGGATGAGAGGAAACGTC 58 64562827 64566606 CCTTCCATGACTTTCCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Wscd2 ENSMUSG00000063430 ENSMUST00000100875 1 1 1 60 5 114001261 114001282 TGTCATCCATAATCAGTGAGTC 59 114001303 114001321 GGGTTCAAATGGAACTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-382 ENSMUSG00000065428 ENSMUST00000083494 3 1 1 60 12 110971983 110972003 CTTGAAGAGAAGTTGTTCGTG 59 110972025 110972043 GTTGTCCGTGAATGATTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-135a-2 ENSMUSG00000065524 ENSMUST00000083590 2 1 1 64 10 91534902 91534920 ACTCTAGTGCTTTATGGCT 57 91534856 91534875 CTTCCATCCCTACATGAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pilrb1 ENSMUSG00000066684 ENSMUST00000110978 3 1 1 282 5 138298438 138298456 GTTAATCTGCAGTCGACAG 58 138294264 138294282 TTAGGCTTTAGTGTGCTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 NP_001098541.1 ENSMUSG00000066836 ENSMUST00000074943 3 1 1 80 7 9152702 9152720 AGATGAATTTGCAGCAGGT 59 9152763 9154152 AGGAGTTTACCTTCAAGCAG 59 NA Nonspecific Mus musculus 50 Mas1 ENSMUSG00000068037 ENSMUST00000089015 1 1 1 85 17 13039275 13040957 CAGCTACTTCTCAAGGAGG 59 13039208 13039226 CAGTTAGTCAGTGGCTCTG 59 NA InUTR Mus musculus 50 Gjd2 ENSMUSG00000068615 ENSMUST00000090275 1 1 1 60 2 113837653 113838812 CTATGATTGGGAGGATCCTG 59 113837612 113837630 ATGGCCACAATGAGTATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1279 ENSMUSG00000068646 ENSMUST00000090329 1 1 1 60 2 111146517 111146536 GACTCTCACTTACATTCACC 57 111146559 111146577 ACACATCGTTCAAAGACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr227 ENSMUSG00000069429 ENSMUST00000091995 1 1 1 60 10 128471031 128471050 GCCTTCAGTAAATGTGTAGC 58 128470990 128471009 TGAATGGGTTCAGTAAAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dsg1a ENSMUSG00000069441 ENSMUST00000077146 3 1 1 81 18 20490652 20491994 AATAGATGATTCCCTTCAGAGG 59 20492036 20492054 TTCTGAACCAGTTACCCAG 58 NA Mus musculus 50 Olfr59 ENSMUSG00000070374 ENSMUST00000080504 1 1 1 60 11 74102301 74102319 CTGATGTACGACTCCACAC 59 74102343 74102361 ATGTCAACACAGGAAAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000010333 ENSMUSG00000070617 ENSMUST00000073532 1 1 1 81 4 143289034 143289053 CCTAGATACATTGAAGGCTG 57 143288472 143288990 TTTGAGTTTGCACCTACTG 57 NA Mus musculus 50 Olfr1339 ENSMUSG00000070820 ENSMUST00000094832 1 1 1 60 4 118407949 118407967 GAGAGGGACAAGAAACTGG 59 118407989 118408009 TTATAGGGTTGAGGAAAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gad1 ENSMUSG00000070880 ENSMUST00000094934 2 1 1 80 2 70425228 70425246 ACTTCCCAGAAGTGAAGAC 58 70425288 70425392 TGGAATAGTGACTGTGTTCTG 59 NA Mus musculus 50 2410022M11Rik ENSMUSG00000071354 ENSMUST00000095785 3 1 1 60 14 57431664 57431682 TATACCCATGTCTTTGGCA 58 57431705 57431724 CTTAGGTTACAGGGAGTCCT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 4930417O22Rik ENSMUSG00000071818 ENSMUST00000078285 1 1 1 193 11 101817400 101820986 TATACTTGTCCCAGAGCCA 59 101821143 101821161 TAGCATTTACAAGCCTGGT 58 NA DesignNoJunction, InUTR Mus musculus 50 ENSMUSG00000072497 ENSMUSG00000072497 ENSMUST00000100571 2 1 1 70 14 55082060 55082078 AAATCTGAATGGCTCCCAC 59 55082008 55082027 TATGGAATTTCCCACCTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1810012P15Rik ENSMUSG00000072640 ENSMUST00000100748 3 1 1 87 11 78649589 78649607 TACTTGTTACGTTGTTGCC 58 78649657 78651607 AATGAACTTGGAAACTCTGC 58 NA Mus musculus 50 ENSMUSG00000072853 ENSMUSG00000072853 ENSMUST00000101091 1 1 1 60 6 108421235 108421253 CAATATAGCACAGGGCTCC 59 108421193 108421212 GAAAGGTAATATGCTCTGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Acot1 ENSMUSG00000072949 ENSMUST00000085210 1 1 1 106 12 85355465 85355483 GAACATGGAAACCATGCAC 59 85357751 85357769 CTTTGGAAATCCCAAGCAG 59 NA DesignNoJunction Mus musculus 50 BC065397 ENSMUSG00000072960 ENSMUST00000089350 3 1 1 61 X 133276826 133276847 GGACAGTGCTAGTATCTAAAGG 59 133276869 133276887 TTTGATTAAATCGGCAGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:1919424 ENSMUSG00000073126 ENSMUST00000110824,ENSMUST00000035694 2 2 3 126 12 33833365 33902593 AGATATGCACCTATTTGGC 57 33934717 33934735 CTTGCTGTCTTGCTTTCTC 59 NA DesignNoJunction Mus musculus 50 EG328839 ENSMUSG00000073384 ENSMUST00000097307 3 1 1 82 17 52592432 52596914 CAACTGAGGTTATAGAGCTGG 59 52592370 52592388 TCTCTACCATTGCTTTGGC 59 NA InUTR Mus musculus 50 ENSMUSG00000073476 ENSMUSG00000073476 ENSMUST00000097436 3 1 1 121 1 193968412 193969107 TCTCCTTCAGTTCAGTCCT 59 193969192 193969210 CTGCTTGCTGAAAGAACTG 59 NA Mus musculus 50 ENSMUSG00000073728 ENSMUSG00000073728 ENSMUST00000097804 2 1 1 75 4 141642425 141642443 TTCACATCTCAAGTCTCCG 59 141642799 141642817 AACAAATTGCCAGGAACTG 58 NA DesignNoJunction Mus musculus 50 1110030E23Rik ENSMUSG00000073825 ENSMUST00000098034 3 1 1 76 7 133833682 133833700 ATCCCAGTGTCAAAGACTG 59 133833624 133833642 GAACTCTCCTGGTCATCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000007322 ENSMUSG00000073846 ENSMUST00000098063 1 1 1 68 4 57770967 57770985 ATATTCACATCTGCTGCAC 57 57770917 57770935 GTAGGGCATTTATGAACGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ccl21c ENSMUSG00000073884 ENSMUST00000098128 1 1 1 173 4 41774668 41774686 TCTAAGCCTGAGCTATGTG 58 41774823 41774923 CTGTTCAGTTCTCTTGCAG 58 NA Nonspecific Mus musculus 50 Vmn2r60 ENSMUSG00000074160 ENSMUST00000094532 3 1 1 168 7 48680358 48680377 GTGCAGACAATGAGATTTCC 59 48656019 48666229 CACACTGATCCATATTTGCA 58 NA InUTR Mus musculus 50 Zfp628 ENSMUSG00000074406 ENSMUST00000116354 1 1 2 222 7 4867007 4869029 GGTTTAGAAGGATCCAGCC 59 4870474 4870492 CCACACTCATACTGAGCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 F830104G03Rik ENSMUSG00000074592 ENSMUST00000099093 3 1 1 110 3 56694083 56694102 ATCAGTACCAAAGCTCACTG 59 56693990 56694010 ACAATTGTACATAGCGCCT 59 NA Mus musculus 50 Defb26 ENSMUSG00000074680 ENSMUST00000099205 3 1 1 60 2 152333888 152333909 TCTATCAGAAGACAAACTACCC 58 152333849 152333868 AGGGATCACTCTTGTTACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000015743 ENSMUSG00000074731 ENSMUST00000109914 3 1 1 80 2 150300538 150300559 GGATCCTTCTCAGAAGAATCTC 59 150300280 150300498 TCCCAAACATAGCCTATAGC 58 NA Nonspecific Mus musculus 50 ENSMUSG00000074982 ENSMUSG00000074982 ENSMUST00000099640 3 1 1 205 2 105844506 105844525 ATATACCTTACCTAGCCCTC 57 105844691 105844711 GCTAGAATTCTTGGAGATGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1154 ENSMUSG00000075146 ENSMUST00000099844 1 1 1 71 2 87743022 87743042 GGCCATTCAATGGATATTGAC 59 87742971 87742989 CAAAGGATTTAGCATGGGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1137 ENSMUSG00000075150 ENSMUST00000099850 1 1 1 60 2 87551575 87551596 GGTTTGATACATACAACACTGG 59 87551536 87551556 GATTGATCTGAGTAGAGCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1095 ENSMUSG00000075171 ENSMUST00000099874 2 1 1 60 2 86691125 86691143 TACATGTGGATCTCACCTC 58 86691083 86691101 ATACATGAAGAGGCTTGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1037 ENSMUSG00000075205 ENSMUST00000099911 3 1 1 83 2 85925080 85925099 CACGATTGTAATTCCAATGC 57 85925016 85925034 TCAAGAGCTTTCCTGAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Amd1 ENSMUSG00000075232 ENSMUST00000099945 1 1 1 80 10 40009970 40009988 TGATCAGGAAAGTTGTGGA 58 40009260 40009926 TGCGACATTTAGAACTCTG 57 NA Nonspecific Mus musculus 50 ENSMUSG00000075547 ENSMUSG00000075547 ENSMUST00000100443 2 1 1 63 2 5833503 5833522 TATAGCATTCACCAAGCCAG 59 5833548 5833566 TACAGAGGTGGAAGAAGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-216b ENSMUSG00000076318 ENSMUST00000102363 1 1 1 60 11 28646213 28646231 CAGGCAAATGTGATGTCAC 59 28646252 28646273 TCAGACTGAAGAATCTCTACAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 IGKV8-26 ENSMUSG00000076581 ENSMUST00000103382 2 1 1 74 6 70143226 70143244 AATCACAGAACCATGTCCT 58 70143481 70143499 ACTGGGTCATCACAATGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S126 ENSMUSG00000076739 ENSMUST00000103548 3 1 1 62 12 117158676 117158696 ACAAGCTATGGTATAAGCTGG 59 117158634 117158652 CTCTCCAATCCACTCAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV3-1 ENSMUSG00000076760 ENSMUST00000103569 1 1 1 127 14 53200382 53200400 ATGAAGACAGTGACTGGAC 58 53200655 53200673 ATGATAATGGCGCTGTCTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 NP_001079023.1 ENSMUSG00000078216 ENSMUST00000105014 2 1 1 132 X 3994626 3994644 TACAACATGCAAACACCTG 58 3994512 3994531 AAGTCACAGATAATGTGCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 4921509A18Rik ENSMUSG00000078315 ENSMUST00000105110 3 1 1 60 X 75984316 75984336 CCTGGAGAAGTTGTTTATGAG 58 75984357 75984376 TGGTATTGGAGTGTTGACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 F8a ENSMUSG00000078317 ENSMUST00000105111 2 1 1 172 X 70474760 70474778 TTCTGCAGGAAACCATCTC 59 70474914 70474932 AGCCAAATTAACATGGCAG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Q3UFZ0_MOUSE ENSMUSG00000078372 ENSMUST00000105164 1 1 1 66 12 35740942 35740963 CAGAAGTAATATGTCTCAGGAG 57 35740990 35741008 TTTAAACATCCCAACAGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Psme3 ENSMUSG00000078652 ENSMUST00000019470,ENSMUST00000107268,ENSMUST00000107267 1 3 3 80 11 101178973 101178991 CACTCAGACATGAACCTCC 59 101179035 101180781 CTTGTAAGTGGGACCATCC 59 NA Mus musculus 50 Arhgap8 ENSMUSG00000078954 ENSMUST00000006029 2 1 1 80 15 84596808 84597538 ATATGATCAAGGGAAGCCC 58 84597582 84597600 CGGAGAAATGTCTTCAGGA 58 NA Mus musculus 50 Trim61 ENSMUSG00000079042 ENSMUST00000078409 2 1 2 60 8 67538096 67538116 GACTGTTACATTAAGCTGTGG 58 67538056 67538074 GTGTGCTAATTGCTTTCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001074787.1 ENSMUSG00000079263 ENSMUST00000111832 1 1 1 84 6 141929494 141930580 AGTATTTGGTGGCATTCCT 58 141929428 141929446 ACCACATTTCTGAGTTCCC 59 NA Mus musculus 50 A2AF45_MOUSE ENSMUSG00000079387 ENSMUST00000101185 2 1 1 60 X 145343474 145350371 CCAGAAATTGACAGATCGT 57 145350392 145350413 GTTCCTGTACCCATAAATAGTC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 NP_001092786.1 ENSMUSG00000079638 ENSMUST00000115191 1 1 1 252 X 34827101 34827119 AATGTAAAGCATGTGTCCG 58 34831113 34831132 ACAGCCTCTTATAACTCCTG 58 NA DesignNoJunction Mus musculus 50 Sox1 ENSMUSG00000079994 ENSMUST00000116111 1 1 1 60 8 12396703 12396721 CACCCGGATTACAAGTACC 59 12396745 12396763 ACTTGTCCTTCTTGAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-1198 ENSMUSG00000080645 ENSMUST00000116995 1 1 1 60 X 7384285 7384303 CTTGGTACTCATGTGTAGC 57 7384327 7384345 GACTGAGACAGGATGACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tpd52l2 ENSMUSG00000000827 ENSMUST00000069712,ENSMUST00000000844 1 2 6 80 2 181242963 181246287 GAGACATGAGCAGCTACTC 59 181247752 181247772 CTTCAAATGACTTGAAGGTGG 59 NA Mus musculus 50 Fmr1 ENSMUSG00000000838 ENSMUST00000114655,ENSMUST00000114654 2 2 8 80 X 65966431 65966449 CCCGAACAGATAATCGTCC 59 65966492 65968701 AGTTAACTGTGATCTGCAGG 59 NA Mus musculus 50 Hpn ENSMUSG00000001249 ENSMUST00000108102,ENSMUST00000039435 3 2 2 82 7 31887550 31887568 GAGACCCTACTATCGACGA 59 31884910 31887506 CTGGATGTATTCTGTGAGAGG 59 NA Mus musculus 50 Npepps ENSMUSG00000001441 ENSMUST00000001480 2 1 2 80 11 97086097 97088051 TGGGTAAAGCTAAATCTGGG 59 97086036 97086056 GCCTGGTAATAAACTTTCGAG 59 NA Mus musculus 50 Cacna1b ENSMUSG00000004113 ENSMUST00000093372,ENSMUST00000114447 3 2 7 103 2 24575475 24575493 TGAATGGGTACTTGGAGTG 58 24573629 24574569 TCTCTTCAACACTGCATCC 59 NA Mus musculus 50 Atp6v1f ENSMUSG00000004285 ENSMUST00000004396 1 1 1 107 6 29417823 29417841 GGCAGAGGTAAGCTAATCG 59 29417912 29417930 TACCAGGAAATTAGGGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc130 ENSMUSG00000004994 ENSMUST00000098578 2 1 2 176 8 86784203 86784221 TGAATAGCATGCTACGGAG 59 86782817 86783021 CCTCATAAGAGTCCAGGGT 59 NA Mus musculus 50 Ewsr1 ENSMUSG00000009079 ENSMUST00000102930,ENSMUST00000079949,ENSMUST00000073308,ENSMUST00000093365 3 4 5 104 11 4983569 4985912 TATCCTCCTACCAGCTACTC 59 4983484 4983502 ACTCTGTTGTCCATAGCTG 58 NA Mus musculus 50 Dnajc7 ENSMUSG00000014195 ENSMUST00000014339,ENSMUST00000107380,ENSMUST00000107378 3 3 3 91 11 100463104 100463122 AATCCTTCAAGGAACAAGG 57 100460613 100463049 AGGACACATATCTATGGCT 57 NA Mus musculus 50 Sqstm1 ENSMUSG00000015837 ENSMUST00000015981 1 1 2 106 11 50014440 50016023 CATCTACAGAGGCTGATCC 58 50014352 50014370 ATTCTTGGTCTGTAGGAGC 58 NA Mus musculus 50 H2afy ENSMUSG00000015937 ENSMUST00000016081 3 1 3 166 13 56205689 56205707 GTGGCTAAGAAGACAGGAG 59 56191208 56197492 ATAAGGTTCAGCTTCTGGC 59 NA Mus musculus 50 Sgk2 ENSMUSG00000017868 ENSMUST00000109433 1 1 2 115 2 162823620 162823638 GTTCTACACTGCAGAGGTG 59 162824000 162829023 CTTCTGGAGCCAAGTACTG 59 NA Mus musculus 50 Med1 ENSMUSG00000018160 ENSMUST00000092735,ENSMUST00000107545,ENSMUST00000018304,ENSMUST00000107541 3 4 4 83 11 98040448 98041342 GAGAATCCTGTGAGCTGTC 59 98034564 98034583 AAGACCCTTAAGATGCTTGG 59 NA Mus musculus 50 1700021K02Rik ENSMUSG00000020096 ENSMUST00000092492 2 1 6 90 10 60642246 60643009 TACTTCTGCTGAAGACACAG 59 60643064 60643082 CAGTTTCTTCCTCCAGGTG 59 NA Mus musculus 50 Egfr ENSMUSG00000020122 ENSMUST00000020325 1 1 3 80 11 16783550 16783568 CTCTGGTCTGGAAGTATGC 59 16783610 16784270 CAGGAACCATTACTCCATAGG 59 NA Mus musculus 50 Rab1 ENSMUSG00000020149 ENSMUST00000020358,ENSMUST00000074741 1 2 4 80 11 20123121 20123142 TCACTTCCAGTTATTACAGAGG 59 20123180 20124388 TAACGTTATTGAAGGACTCCTG 59 NA Mus musculus 50 Ogdh ENSMUSG00000020456 ENSMUST00000003461,ENSMUST00000101554,ENSMUST00000101555 1 3 7 95 11 6213975 6216991 CATATCAGATACGAGGGCA 58 6217050 6217068 ATGAGATAATGTCAGCGGG 59 NA Mus musculus 50 Ggnbp2 ENSMUSG00000020530 ENSMUST00000100685 1 1 3 80 11 84667877 84671954 CTAAACCTCTGGGTGAAGG 59 84667815 84667834 TGTGGTCTTCACTACTTCTC 58 NA Nonspecific Mus musculus 50 Gga3 ENSMUSG00000020740 ENSMUST00000106508 2 1 2 102 11 115449307 115450177 CTCTGAAGGCCTTACTGAC 59 115449004 115449023 GAAGTCCAGATCTGATGGTG 59 NA Mus musculus 50 Srp68 ENSMUSG00000020780 ENSMUST00000021133 3 1 2 184 11 116133268 116133287 AGATCATTAAGGAGTCGCAG 59 116126857 116129599 CAGCAAGTATCTGTTATCAGTC 58 NA Mus musculus 50 3300001P08Rik ENSMUSG00000020863 ENSMUST00000107821,ENSMUST00000107820,ENSMUST00000021226,ENSMUST00000107822 3 4 4 84 11 94167531 94170949 TTCTGATCTTGGTCCATGTG 59 94165267 94165285 GCCAACTTTCATAAAGCGA 58 NA Mus musculus 50 Cacna1g ENSMUSG00000020866 ENSMUST00000107789,ENSMUST00000050636 3 2 14 106 11 94274483 94274501 CAGAGATTGTGTCTGAACC 57 94272922 94274413 AGGTACCATATTGCTCTCC 58 NA Mus musculus 50 Myh10 ENSMUSG00000020900 ENSMUST00000018887,ENSMUST00000108673 1 2 4 130 11 68547899 68547917 ACCAGTCAATTCTATGCAC 57 68558909 68559445 CGATTCCTGAGGAATATTATGG 58 NA Mus musculus 50 2310004I24Rik ENSMUSG00000020910 ENSMUST00000072719,ENSMUST00000116364,ENSMUST00000116363 3 3 3 96 11 66851937 66853728 GATTGTGAGCCATCTTCCT 59 66851859 66851880 CTTGTGAGACCATATGATTGAC 58 NA Mus musculus 50 Rgs6 ENSMUSG00000021219 ENSMUST00000101234 1 1 2 82 12 84192774 84192792 ATTCATAACACCAGCAGAG 57 84192838 84193033 ACAAGTCAAAGCTCATCTC 57 NA Mus musculus 50 1300014I06Rik ENSMUSG00000021411 ENSMUST00000021847 1 1 2 139 13 34729133 34729151 CAGAACTGGAGTGGTAGAC 59 34722321 34729033 CCTCATGATTTCTCAGAAATGC 59 NA Mus musculus 50 Rnf180 ENSMUSG00000021720 ENSMUST00000062286,ENSMUST00000069686 2 2 3 131 13 105957729 105971544 TCTTTCTCCAGACAGAACTG 58 105957617 105957635 GATGGAATCCTTTCCTGCA 59 NA Mus musculus 50 Trp63 ENSMUSG00000022510 ENSMUST00000115308,ENSMUST00000115305 1 2 6 82 16 25871212 25876724 CAGAAACATCTCCTTTCAGC 58 25876769 25876787 AAGAAGACGTCAGACTGTG 59 NA Mus musculus 50 4930562C15Rik ENSMUSG00000022518 ENSMUST00000100211,ENSMUST00000023160 3 2 2 149 16 4847487 4847505 CTGTTCAGAAGGATGTGGA 58 4849277 4849295 CTCGAACCTTGTTCTGGAG 59 NA DesignNoJunction Mus musculus 50 Sidt1 ENSMUSG00000022696 ENSMUST00000114650,ENSMUST00000047446 1 2 3 87 16 44255133 44258058 CGTTTCAAGATAGATCTGGGA 59 44255066 44255084 TATACAGAGGTCTGCTGCA 59 NA Mus musculus 50 Slc7a4 ENSMUSG00000022756 ENSMUST00000063544,ENSMUST00000090165 3 2 3 104 16 17573747 17574046 CTTTCCAGATCCCTTTGGT 59 17573661 17573679 AGAAGATAAAGCGTAGCCA 58 NA Mus musculus 50 Pigp ENSMUSG00000022940 ENSMUST00000113914,ENSMUST00000113905,ENSMUST00000113910,ENSMUST00000062865,ENSMUST00000113906 3 5 6 131 16 94586385 94586971 ACGATCACAGATAACTATGC 57 94586273 94586291 GGTATTGAGTTCTTTGGCT 57 NA Nonspecific Mus musculus 50 Centg3 ENSMUSG00000023353 ENSMUST00000024123,ENSMUST00000057281 3 2 2 83 5 23982247 23982461 TTAAAGTGGGCATAGTGGG 59 23982508 23982526 CTTCCTGGACATAAGTCCC 59 NA Mus musculus 50 Cpne5 ENSMUSG00000024008 ENSMUST00000024805 3 1 2 122 17 29296179 29296908 GACATTGTCCAGTTTGTGC 59 29296075 29296093 CATGTAGGACACCAGTTGG 59 NA Mus musculus 50 Dtna ENSMUSG00000024302 ENSMUST00000115832,ENSMUST00000075123 1 2 7 86 18 23756055 23761096 ATCGTTGATACTTGGCCTC 59 23761146 23761164 GAAAGGACTTCCTGAGGAG 58 NA Mus musculus 50 Rbm27 ENSMUSG00000024491 ENSMUST00000115550,ENSMUST00000091920 2 2 3 94 18 42480555 42481570 CCATAGTTAATATCCAGGTTGC 58 42481625 42481643 GCTAGAAATGGCTTTCCTG 58 NA Mus musculus 50 Spink3 ENSMUSG00000024503 ENSMUST00000025381 2 1 1 67 18 43894861 43894879 TTTCAGCTAAGGTGACTGG 59 43893243 43893262 ATAAATTCTGGGACATCCCG 59 NA DesignNoJunction Mus musculus 50 Fech ENSMUSG00000024588 ENSMUST00000091055,ENSMUST00000025484 3 2 2 84 18 64634763 64634781 CATCAAGATGTGGACTTCC 57 64630457 64634715 GTATTTGTGAGGTGCTGTG 58 NA Mus musculus 50 Syt7 ENSMUSG00000024743 ENSMUST00000025652 3 1 3 80 19 10501145 10504833 TGAAATCCTTCCTGGAAGG 58 10504876 10504895 GGATATTGGCAAAGTCATCC 58 NA Mus musculus 50 Men1 ENSMUSG00000024947 ENSMUST00000113504,ENSMUST00000056391,ENSMUST00000113502,ENSMUST00000079327,ENSMUST00000113503,ENSMUST00000113500,ENSMUST00000078137 3 7 7 96 19 6337506 6337606 GGACATCTGGAAAGATACCC 59 6337665 6337683 GATAAAGGGTGAGTGGGTC 59 NA Nonspecific Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000111657,ENSMUST00000111658,ENSMUST00000111654,ENSMUST00000111652 2 4 15 113 19 55829572 55892273 GTATCTTCAGATGAAATGGCC 58 55892347 55982923 ACTTTGTTCGAAACGATGTG 59 NA Mus musculus 50 Tm9sf3 ENSMUSG00000025016 ENSMUST00000025989 3 1 2 90 19 41309224 41309243 GCCATATTTGTCTATGCTGC 59 41306944 41309173 CCTTTATCCATCTCCTTCCTC 59 NA Mus musculus 50 1700011F14Rik ENSMUSG00000025090 ENSMUST00000069419 2 1 2 191 19 58601919 58611061 TGAGAAGGGAAATGAAGTCG 59 58611811 58611832 GAGGCTTATCTCTTACTTTGGT 59 NA Mus musculus 50 R3hdm2 ENSMUSG00000025404 ENSMUST00000105250,ENSMUST00000064793 1 2 5 91 10 126896618 126902042 GAGATGATAACCAGACCGG 59 126902214 126902232 CTGCCTTCTCTTGTGAGAG 59 NA Mus musculus 50 Slco3a1 ENSMUSG00000025790 ENSMUST00000098371,ENSMUST00000026897 1 2 2 94 7 81448008 81448028 TTCTGTCATCATCCTCATCAG 59 81429547 81442116 GGATGAAACCCAACAAACG 59 NA Mus musculus 50 Slco3a1 ENSMUSG00000025790 ENSMUST00000098371,ENSMUST00000026897 2 2 2 97 7 81448013 81448031 CCCTTCTGTCATCATCCTC 59 81429547 81442116 GGATGAAACCCAACAAACG 59 NA Mus musculus 50 1110028C15Rik ENSMUSG00000026004 ENSMUST00000068168 1 1 3 80 1 66782254 66782272 CATGAAAGGAGAGCTTGCT 59 66773364 66782213 AATCTAGTTCTTTCTCCTGCAG 59 NA Mus musculus 50 Uap1 ENSMUSG00000026670 ENSMUST00000027981 3 1 3 157 1 172079524 172079543 TCAAGAATGCAGACAGTCAG 59 172078159 172079404 CTTTCCATTTGTAGCACGG 59 NA Mus musculus 50 Arpc5l ENSMUSG00000026755 ENSMUST00000112862,ENSMUST00000090993 2 2 2 60 2 38868686 38868704 CACCAAGAATCAAGCTGTG 59 38869261 38869281 GTTTGTGAGTACTTTCAGGAC 58 NA DesignNoJunction Mus musculus 50 Abi2 ENSMUSG00000026782 ENSMUST00000087417 1 1 2 80 1 60494010 60494028 GCCAGTTCGTTATATTCGA 57 60494071 60495799 AATCTAAGCAACCACTTCAC 58 NA Mus musculus 50 Abl1 ENSMUSG00000026842 ENSMUST00000075759,ENSMUST00000113455,ENSMUST00000028190,ENSMUST00000113454 2 4 4 82 2 31640286 31645795 TGAAGACCTTGAAGGAGGA 59 31645840 31645859 GTTAGGGTGTTTGATCTCCT 59 NA Mus musculus 50 Dab2ip ENSMUSG00000026883 ENSMUST00000112997,ENSMUST00000112987,ENSMUST00000091010,ENSMUST00000112992,ENSMUST00000112980,ENSMUST00000095461,ENSMUST00000112989,ENSMUST00000112986,ENSMUST00000065001,ENSMUST00000028246,ENSMUST00000112983,ENSMUST00000112981,ENSMUST00000112982 2 13 13 82 2 35578733 35582954 TCATCAGCAGGTTGATGTC 59 35582998 35583018 CTTCTGTTTGGAATCTACAGC 58 NA Mus musculus 50 Lhx6 ENSMUSG00000026890 ENSMUST00000053815 1 1 7 183 2 35958899 35958918 AGAATATCTGCTCCAGTTGC 59 35957876 35958388 GGAGCAGATCTGAAGTAGTC 59 NA Mus musculus 50 BC003993 ENSMUSG00000027014 ENSMUST00000111824,ENSMUST00000065889,ENSMUST00000111819,ENSMUST00000111818,ENSMUST00000111821 3 5 5 94 2 77769559 77769577 CGGGATAGAGGTTACTCTG 58 77767547 77769501 TCCCTACTTCGTGATTCCA 59 NA DesignRelaxed Mus musculus 50 Fbn1 ENSMUSG00000027204 ENSMUST00000028633,ENSMUST00000103234 2 2 2 80 2 125195663 125195896 AAACCATCTGCATAGAAACC 58 125195602 125195620 CTCCGTTGATGTTGATCTC 57 NA Mus musculus 50 4930525F21Rik ENSMUSG00000027209 ENSMUST00000110446,ENSMUST00000110448 1 2 4 134 2 125809491 125811999 ATAAACAACGTGTTGAGGC 58 125809375 125809395 CCACATTGTTGAAGTCTTCTG 59 NA Mus musculus 50 Snx5 ENSMUSG00000027423 ENSMUST00000028909,ENSMUST00000110030 3 2 2 80 2 144086509 144086528 GGCAACATGAAGACTTTGTG 59 144084902 144086467 GAGCAGGAGGGATAATAAGG 59 NA Mus musculus 50 Ndrg3 ENSMUSG00000027634 ENSMUST00000072298 1 1 3 92 2 156754609 156756961 ATGGGCTACATACCATCTG 58 156754535 156754553 AAAGGGACTTTCTCCAGAG 58 NA Mus musculus 50 Lef1 ENSMUSG00000027985 ENSMUST00000106341,ENSMUST00000029611,ENSMUST00000098611 1 3 3 80 3 130816833 130818341 TGATGAAGGAAAGCATCCA 58 130818385 130818403 GGCATCATTATGTAGCCAG 58 NA Nonspecific Mus musculus 50 Ppp3ca ENSMUSG00000028161 ENSMUST00000056758,ENSMUST00000070198 1 2 3 108 3 136584869 136591492 TCTCAGTTCTCAGAGAAGAG 57 136591563 136591581 CTTTGCAGAGTCTGTTTCC 58 NA Mus musculus 50 Gem ENSMUSG00000028214 ENSMUST00000108304,ENSMUST00000029868 1 2 2 99 4 11639307 11640626 AAGTGTCTGTGTCAGAAGG 59 11640689 11640707 TCAAACAGTTCCTTCACGT 59 NA Mus musculus 50 Tmem68 ENSMUSG00000028232 ENSMUST00000029891 2 1 2 131 4 3487742 3487760 CTTGTTAGCTATCTCACCG 57 3481545 3487648 AACATAGGAATAATGGGCAC 57 NA Mus musculus 50 Sfrs18 ENSMUSG00000028248 ENSMUST00000029911,ENSMUST00000098238,ENSMUST00000108229 3 3 3 85 4 21793085 21793103 CTAGAAGTCCATCTCCAGC 58 21793150 21796671 CAGCAACATCATTTGGTACTC 59 NA Mus musculus 50 1810030N24Rik ENSMUSG00000028295 ENSMUST00000029972,ENSMUST00000108134,ENSMUST00000108131,ENSMUST00000108132,ENSMUST00000108133 3 5 5 91 4 34716385 34718514 TTAAACCCAACAAACCTGTG 58 34716313 34716331 GTTCTCTTGAGTTGCATGC 59 NA Mus musculus 50 Invs ENSMUSG00000028344 ENSMUST00000030029,ENSMUST00000107715,ENSMUST00000107713,ENSMUST00000107710 2 4 5 81 4 48415798 48420475 AACAATGAGGAGAGGTACAC 59 48420519 48420537 CATGTTCCAGCATGAACTG 59 NA Mus musculus 50 Zfp618 ENSMUSG00000028358 ENSMUST00000107415,ENSMUST00000030043 2 2 2 60 4 62747645 62750403 TTGAAATATGCATCTGGGTC 57 62750423 62750444 TGTAGTACTTGTACTTCTTGCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Tnc ENSMUSG00000028364 ENSMUST00000030056,ENSMUST00000107372,ENSMUST00000070019,ENSMUST00000107379,ENSMUST00000107377,ENSMUST00000107375,ENSMUST00000107374 3 7 8 81 4 63628303 63628321 CTACTCAGCAAGGATCCAG 59 63627686 63628258 CAGGAGTCCAATTGTTGTG 58 NA Mus musculus 50 4930500O09Rik ENSMUSG00000028492 ENSMUST00000030216 1 1 2 104 4 86124783 86124801 ATGCAATATCTGCCTACCT 58 86091642 86091660 AAACTTGGAAGACTCTGGC 59 NA DesignNoJunction Mus musculus 50 Ak3l1 ENSMUSG00000028527 ENSMUST00000102780,ENSMUST00000106946,ENSMUST00000030252,ENSMUST00000106945,ENSMUST00000106948 3 5 6 80 4 101119875 101133113 CTGTTAGATGGATTCCCGA 58 101133155 101133175 CAAACTGATTACTAGGTCCAC 58 NA Nonspecific Mus musculus 50 Itgb3bp ENSMUSG00000028549 ENSMUST00000102786,ENSMUST00000097960 3 2 2 197 4 99448652 99456300 AGTATACAGGCTTTGGAGG 58 99436198 99436217 GGCTTTAAGGAATTCAAAGC 57 NA Nonspecific Mus musculus 50 Pum1 ENSMUSG00000028580 ENSMUST00000030315,ENSMUST00000105992,ENSMUST00000097862 3 3 6 93 4 130321886 130321904 TGTCCTATCATTGGCACTG 59 130321959 130324739 CATCTCGTTAATTACCTGCTG 58 NA Mus musculus 50 4931406I20Rik ENSMUSG00000028677 ENSMUST00000030439 1 1 5 90 4 117162256 117162275 ACTGGGAAGAAGATCTTTGC 59 116980275 117162206 TCTTCTTACATCTGTCATTCCG 59 NA Mus musculus 50 Nol9 ENSMUSG00000028948 ENSMUST00000084116,ENSMUST00000103197 2 2 3 121 4 151430323 151431906 GTTTGGGCTTTGGTATCTG 58 151431991 151432009 GATGGAAATGGAACCAACC 58 NA Mus musculus 50 Tnfrsf9 ENSMUSG00000028965 ENSMUST00000030808,ENSMUST00000105671,ENSMUST00000116257 2 3 5 81 4 150309598 150309618 CTTCATTACTCTCCTGTTCTC 57 150309660 150318895 GGTCTTCTTAAATGGTTGCT 58 NA Mus musculus 50 Zfp509 ENSMUSG00000029127 ENSMUST00000094833 3 1 4 93 5 38604610 38604629 CCAGAAACAGTATGCATGTG 59 38601893 38604555 AGGTTTCTCACCTGTATGAG 58 NA Mus musculus 50 Ep400 ENSMUSG00000029505 ENSMUST00000086645,ENSMUST00000041558,ENSMUST00000112436,ENSMUST00000112435 3 4 4 81 5 111114173 111114385 GACTTTATGGAACAGCTTACTC 58 111114113 111114131 TTTCTTGTTCAGTGGTCGT 59 NA Mus musculus 50 Cit ENSMUSG00000029516 ENSMUST00000112011 1 1 6 129 5 116386765 116386783 GAGCTCCTGCAGAATATCC 59 116386876 116391864 GATGTTTCTCCTCCAGCTC 59 NA Mus musculus 50 Ddx54 ENSMUSG00000029599 ENSMUST00000111876,ENSMUST00000031598 2 2 2 84 5 121069648 121069784 CCTGACATAATCATTGCCAC 58 121069831 121069849 CCACATACTCCACACTCTG 59 NA Mus musculus 50 Tpk1 ENSMUSG00000029735 ENSMUST00000114643 1 1 3 82 6 43561330 43561348 CTTTGGATGCACGATTTCG 59 43543096 43543114 TATCAGTCTCCTCTCAGCA 58 NA DesignNoJunction Mus musculus 50 Uba3 ENSMUSG00000030061 ENSMUST00000032142 1 1 2 80 6 97153516 97153535 ACCATGTAAAGAAGTTCCTC 57 97149303 97153474 AACCAGATAATGCTTCAGTG 57 NA Mus musculus 50 Frmd4b ENSMUSG00000030064 ENSMUST00000113355,ENSMUST00000113359,ENSMUST00000032146 3 3 3 80 6 97255191 97255209 ATTCCATCAACGAATACCG 57 97252328 97255147 GAATGATGTCTTCTGGTGG 57 NA Mus musculus 50 Itpr1 ENSMUSG00000030102 ENSMUST00000032192,ENSMUST00000113208,ENSMUST00000113207,ENSMUST00000113204 3 4 4 80 6 108330997 108331016 CCTTTCAGACATATTTGCCG 59 108331057 108331190 TATGTACTCCTGGTTCTTCCT 59 NA Mus musculus 50 Klra2 ENSMUSG00000030187 ENSMUST00000088867 1 1 2 80 6 131171875 131171894 ATTTATCCCTCTGCCATCTC 58 131170272 131171834 CTGCTGAAACATGACAATCTG 59 NA Mus musculus 50 Ptpro ENSMUSG00000030223 ENSMUST00000077115 1 1 2 80 6 137334873 137341214 TATTGTACCCAGGTGAACTC 58 137341256 137341275 TAAGTACATCACAACCTGGT 58 NA Mus musculus 50 Mlstd1 ENSMUSG00000030303 ENSMUST00000111607 1 1 2 80 6 148123599 148123618 GCCCTGTTTCTTATCATCTG 58 148123660 148129516 CAAGGGACAAATGAAGAACC 59 NA Mus musculus 50 Parva ENSMUSG00000030770 ENSMUST00000106643 2 1 3 132 7 119571607 119687702 CAAAGAAGTATCCGAGTTCC 57 119688263 119688281 GTTTGGATCGACCATTGTC 58 NA Mus musculus 50 Ush1c ENSMUSG00000030838 ENSMUST00000107685,ENSMUST00000078680 2 2 4 103 7 53471441 53474678 AAGCCCAAGTATGATCAGG 59 53457013 53457031 GGATCAAAGCCTTCTTCGT 59 NA Mus musculus 50 Ate1 ENSMUSG00000030850 ENSMUST00000035458 1 1 3 105 7 137647358 137651007 CACAAGTTAGAGGTGAGGC 59 137647271 137647292 GTATAGCCACTTGATACTTGGT 59 NA Mus musculus 50 Ate1 ENSMUSG00000030850 ENSMUST00000035458 3 1 3 106 7 137647358 137651007 CACAAGTTAGAGGTGAGGC 59 137647270 137647291 TGTATAGCCACTTGATACTTGG 59 NA Mus musculus 50 Uros ENSMUSG00000030979 ENSMUST00000106145,ENSMUST00000106146,ENSMUST00000033276 2 3 4 80 7 140881354 140882199 GAAGATCAGGGTATCCCAG 58 140881292 140881311 TAACGCCTGAATATACTCGA 58 NA Mus musculus 50 Chic1 ENSMUSG00000031327 ENSMUST00000116547,ENSMUST00000033690 3 2 2 168 X 100582637 100583332 GATTATACCACAAGCTTGCTC 59 100584872 100584893 GGTAGGAAATGACAGATAACAC 58 NA InUTR Mus musculus 50 Zfp92 ENSMUSG00000031374 ENSMUST00000114495,ENSMUST00000033740,ENSMUST00000086470 1 3 3 80 X 70665622 70666574 GTCAGTAGGATTTGCTTTCTC 58 70666615 70666634 CCATCATCTCTAATCCAGGG 59 NA Mus musculus 50 Arhgap4 ENSMUSG00000031389 ENSMUST00000114406 1 1 7 127 X 71146073 71151511 CTCAGAACTCCAGACAGTG 59 71145799 71145985 TCTTATTCACCTCTTCTGTCTC 58 NA Mus musculus 50 Mpp1 ENSMUSG00000031402 ENSMUST00000033775,ENSMUST00000064027,ENSMUST00000114091 3 3 3 91 X 72363281 72366781 CGCTACAGATGTTCATGAG 57 72363208 72363227 AGTAACAAACTTCAGTCCTG 57 NA Mus musculus 50 Mcf2l ENSMUSG00000031442 ENSMUST00000064573 2 1 12 138 8 12984884 12984902 CATCTTGGTCATAGACCGA 58 12991695 12991716 CTCAGACAAACAAACATAAGGG 59 NA DesignNoJunction Mus musculus 50 Mcf2l ENSMUSG00000031442 ENSMUST00000110864 1 1 12 94 8 13006834 13007695 ACAACAGGAATATTCCTGC 57 13009469 13009487 ATAGATCTGGAACTCCTCC 57 NA Mus musculus 50 Rab3a ENSMUSG00000031840 ENSMUST00000034301,ENSMUST00000110093,ENSMUST00000110090,ENSMUST00000110092 1 4 4 160 8 73280444 73280462 ATTTAATGCAGTGCAGGAC 58 73281158 73281811 CAAAGAACTCAAAGCCCAG 58 NA Mus musculus 50 Pde4a ENSMUSG00000032177 ENSMUST00000039413,ENSMUST00000069577,ENSMUST00000115458 2 3 4 96 9 20996998 20997017 TCTCACTCCTAACCAATGTG 59 20999060 20999199 CATGTCTCCTCTGACAGTG 59 NA Mus musculus 50 Eml4 ENSMUSG00000032624 ENSMUST00000096766,ENSMUST00000086525 2 2 4 183 17 83827349 83827557 TGTCATCGTCAATCAAGCA 59 83839485 83840645 ATAACCGTATACCCACTCCA 59 NA Mus musculus 50 Trib3 ENSMUSG00000032715 ENSMUST00000040312,ENSMUST00000099213 3 2 2 75 2 152165453 152165471 TGTCTTCAGCAACTGTGAG 59 152164369 152164387 ATCTGATCCAGTCATCACG 58 NA DesignNoJunction Mus musculus 50 Rasgrp2 ENSMUSG00000032946 ENSMUST00000113476,ENSMUST00000113475,ENSMUST00000113472,ENSMUST00000035716,ENSMUST00000113471 3 5 5 80 19 6402507 6402525 CGCATGTTTCTCATGATGC 59 6402568 6403036 GGATTGCTGATAGAAGTGGA 59 NA Nonspecific Mus musculus 50 Rasgrp2 ENSMUSG00000032946 ENSMUST00000113476,ENSMUST00000113475,ENSMUST00000113472,ENSMUST00000035716,ENSMUST00000113471 2 5 5 60 19 6403039 6403058 GAAGGACAACTCCAATTCTC 58 6403081 6403444 TGAGATCCAGTACCTGACC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 D030074E01Rik ENSMUSG00000033382 ENSMUST00000097658 3 1 2 81 18 21033195 21043572 ACATAAGTGCTACTACTCCA 57 21033133 21033152 AGAAACTCATGATCTGATGC 57 NA Mus musculus 50 Dysf ENSMUSG00000033788 ENSMUST00000113823,ENSMUST00000113818,ENSMUST00000081904 2 3 5 82 6 84037795 84037813 CACTCACAATGACACTGTG 58 84037857 84047710 TGTCGTCCACTTCTATTTCTC 59 NA Mus musculus 50 Scaper ENSMUSG00000034007 ENSMUST00000037408,ENSMUST00000037110,ENSMUST00000098748,ENSMUST00000114279 2 4 4 107 9 55401322 55403902 CATTCATCCAGGACTTTGC 58 55398634 55398652 ATCTGTTAGCCAGTTCCAG 58 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111696,ENSMUST00000111695,ENSMUST00000111694,ENSMUST00000111678,ENSMUST00000111677,ENSMUST00000111676,ENSMUST00000111687,ENSMUST00000111685,ENSMUST00000111684,ENSMUST00000111672 3 10 23 72 2 84443386 84443404 GAAGAGTTGGATGTGTTGG 58 84443048 84443350 GCTAAATCTTCTGCATGGG 58 NA DesignRelaxed Mus musculus 50 Kctd9 ENSMUSG00000034327 ENSMUST00000078053 3 1 2 80 14 68344413 68346711 GAGAGCCGTTTATTGATCCT 59 68346753 68346772 TTAATGTGAGCCAGTCTGTG 59 NA Mus musculus 50 Ccdc128 ENSMUSG00000034709 ENSMUST00000038551,ENSMUST00000112218 1 2 2 117 17 88942244 88944669 TGCTCTGAAGGAACAACTG 59 88944750 88944768 ATCTTGAAGGAGTTCCACC 58 NA Mus musculus 50 Wdr78 ENSMUSG00000035126 ENSMUST00000081526 2 1 5 90 4 102735049 102738879 AATAAAGCAAACCCATGGC 58 102734977 102734996 CTAGCAGATTAGGTGAGCTG 59 NA Mus musculus 50 Myo1d ENSMUSG00000035441 ENSMUST00000041065 2 1 2 85 11 80371081 80400357 CTGTACAACTTGACTGGTC 57 80371014 80371033 ACAATGAGGTCTTTGTTGTC 58 NA Mus musculus 50 Rcbtb1 ENSMUSG00000035469 ENSMUST00000043227,ENSMUST00000111255,ENSMUST00000022551,ENSMUST00000111258,ENSMUST00000095778 1 5 5 91 14 59828922 59829280 CAATGATGAGGTCTTCGTG 58 59829335 59829353 CTTCTAGTTTCTTGGGCAC 58 NA Mus musculus 50 Tmem63b ENSMUSG00000036026 ENSMUST00000039445,ENSMUST00000113523 2 2 2 80 17 45811201 45812344 TCAGGATAAAGGACGATGAG 58 45811140 45811160 CAATGATGTGTCTTTGGAAGG 59 NA Mus musculus 50 BC053749 ENSMUSG00000036864 ENSMUST00000108165,ENSMUST00000062708 3 2 2 81 7 31334107 31334125 CACTGAGGGACAAAGTACC 59 31331431 31334064 GAACCTGTTTATGTACTTGGC 59 NA Mus musculus 50 Myom3 ENSMUSG00000037139 ENSMUST00000105854,ENSMUST00000074336 3 2 2 80 4 135329717 135330209 CTTTAAACGATCTATGTTCGGC 59 135330250 135330268 AAAGGCTCTTTCTCTTGGG 59 NA Mus musculus 50 4932438A13Rik ENSMUSG00000037291 ENSMUST00000039841 1 1 2 80 3 36842222 36842241 TATTATGGCCAGTCTTTGCT 59 36842281 36845180 GTTCACATTTCCATCTACAGTC 59 NA Mus musculus 50 Tacc3 ENSMUSG00000037313 ENSMUST00000079534,ENSMUST00000074849 2 2 4 133 5 34009386 34009723 ACTTCCTCGTTTAAGGAGTC 59 34010614 34010632 TCCTCCTCTGTATCCTGTG 59 NA Mus musculus 50 Tacc3 ENSMUSG00000037313 ENSMUST00000079534,ENSMUST00000074849 3 2 4 134 5 34009385 34009723 AACTTCCTCGTTTAAGGAGTC 59 34010614 34010632 TCCTCCTCTGTATCCTGTG 59 NA Mus musculus 50 Arid5a ENSMUSG00000037447 ENSMUST00000046406,ENSMUST00000115032,ENSMUST00000115031,ENSMUST00000097779,ENSMUST00000116629,ENSMUST00000097778,ENSMUST00000115029,ENSMUST00000115030 3 8 8 116 1 36375407 36375426 AATACAAGATGGCCAAGGAG 59 36375843 36375861 CTGATTTGGTCTTTCCTGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Arl5c ENSMUSG00000038352 ENSMUST00000042971 3 1 2 80 11 97854813 97855661 TAATGCTGAGTTTGTCATCC 57 97854752 97854770 ATCTTATACAGCTCCTCCC 57 NA Mus musculus 50 Fbxo25 ENSMUSG00000038365 ENSMUST00000098917 3 1 2 80 8 13929433 13931195 TGACAAAGGTAAACACTGG 57 13931239 13931257 CATCTGAGAAACGGTACAG 57 NA Mus musculus 50 Vill ENSMUSG00000038775 ENSMUST00000051386,ENSMUST00000074734 1 2 2 100 9 118979841 118979859 ACTCAATGGTCAATGGGAG 59 118979922 118980260 GAGATAGAACTCCTTACGGG 58 NA Mus musculus 50 Zzz3 ENSMUSG00000039068 ENSMUST00000106103,ENSMUST00000106100,ENSMUST00000106101,ENSMUST00000106105 3 4 5 81 3 152111883 152111987 TGATAAAGTAGGGTTGCCC 58 152112032 152112050 CAACATGGAGTACGAAAGG 58 NA Mus musculus 50 Slc9a8 ENSMUSG00000039463 ENSMUST00000047815,ENSMUST00000073873 1 2 4 109 2 167282958 167285160 CAGCATTAGTGTTGAAGCAC 59 167285232 167285250 GAGTGAGATTCCTTCTGCC 59 NA Mus musculus 50 Stau1 ENSMUSG00000039536 ENSMUST00000109235,ENSMUST00000109238,ENSMUST00000109236,ENSMUST00000088055,ENSMUST00000049412 3 5 5 81 2 166776822 166776840 GTAAAGAAACCAGGAGACG 57 166776589 166776777 CGTCCTTGTTACTAGTTCC 57 NA Mus musculus 50 Disp2 ENSMUSG00000040035 ENSMUST00000063975,ENSMUST00000110846,ENSMUST00000110843,ENSMUST00000037547 1 4 4 81 2 118612455 118612614 ATGCCGAAGAGCTATTCTC 59 118612659 118612677 TACAGAGGAAGATGAAGGC 58 NA Mus musculus 50 2900008C10Rik ENSMUSG00000040363 ENSMUST00000115513,ENSMUST00000115512 2 2 4 81 X 11625766 11626132 GGATCTCCAAAGATGACTGG 59 11625704 11625722 AGCTCATTACAATGTGGGT 58 NA Mus musculus 50 Pex2 ENSMUSG00000040374 ENSMUST00000059021,ENSMUST00000071280 2 2 2 81 3 5561752 5562676 AATTACAGACAGCATCTGAGG 59 5561691 5561710 CTGACTTATCCTCAGCACTC 59 NA InUTR Mus musculus 50 Klhl32 ENSMUSG00000040387 ENSMUST00000108218,ENSMUST00000108217,ENSMUST00000084781 2 3 6 87 4 24556490 24559799 ACCTAACCAGAATAAGTGGA 57 24556422 24556441 ATAAAGCTTCCTTTGGACAG 57 NA Mus musculus 50 Pitpnc1 ENSMUSG00000040430 ENSMUST00000103064 2 1 3 97 11 107095665 107095683 GAGTGGAACAATTTGTGCA 58 107078100 107087554 CATTGTCATATCGTACCACTC 58 NA Mus musculus 50 Wbscr27 ENSMUSG00000040557 ENSMUST00000111221,ENSMUST00000068617 3 2 5 242 5 135409377 135409395 TTGCTGTGGATTGTCTCAG 59 135410288 135416338 AAACAAGTCCACCTTCAGG 59 NA DesignRelaxed Mus musculus 50 Zmiz2 ENSMUSG00000041164 ENSMUST00000109787,ENSMUST00000012612,ENSMUST00000109786,ENSMUST00000109789,ENSMUST00000093347,ENSMUST00000102914,ENSMUST00000109785 2 7 7 88 11 6302868 6303134 ATTCAGAACTCAGACTACGA 57 6303185 6303203 TCCTTGATGTGTAGGTCAG 58 NA Mus musculus 50 Zmiz2 ENSMUSG00000041164 ENSMUST00000109787,ENSMUST00000012612,ENSMUST00000109786,ENSMUST00000109789,ENSMUST00000093347,ENSMUST00000102914,ENSMUST00000109785 3 7 7 88 11 6302868 6303135 ATTCAGAACTCAGACTACGAG 58 6303185 6303203 TCCTTGATGTGTAGGTCAG 58 NA Mus musculus 50 Gck ENSMUSG00000041798 ENSMUST00000109822,ENSMUST00000109823 3 2 4 183 11 5811014 5814974 CTCTGGTAGAGCAGATCCT 59 5810420 5810869 AGAAAGTCTCCAACTTCTGAG 59 NA Mus musculus 50 Dzip1 ENSMUSG00000042156 ENSMUST00000110728 2 1 2 88 14 119280291 119280309 GGAAGTGGGAATAAAGCAG 58 119280067 119280240 ACAGAACCGAACTTTAACTC 57 NA Mus musculus 50 Fgf11 ENSMUSG00000042826 ENSMUST00000011285,ENSMUST00000108637,ENSMUST00000102585 3 3 3 209 11 69615002 69615020 GTCACTTTGCCAGAAACAG 59 69612945 69613173 AGATTGAAGTGGGTGAAGG 59 NA DesignRelaxed Mus musculus 50 Casc1 ENSMUSG00000043541 ENSMUST00000111728,ENSMUST00000057366 2 2 4 81 6 145123839 145125867 GTCATCAACAATAAGGTGAGG 58 145123778 145123796 TGTCACCACTGAACATGAG 59 NA Mus musculus 50 Casc1 ENSMUSG00000043541 ENSMUST00000060797 1 1 4 109 6 145124800 145125867 GTCATCAACAATAAGGTACCC 58 145124711 145124729 GAATTGCAGACCATGTTCC 59 NA Mus musculus 50 AU042671 ENSMUSG00000043679 ENSMUST00000055859,ENSMUST00000100769 3 2 2 83 5 121765446 121765466 GCAAGCTCTCCATATTTATCC 58 121765511 121767224 GTCCTTCTGAGCTACTCAG 58 NA Mus musculus 50 Emx2 ENSMUSG00000043969 ENSMUST00000062216 3 1 1 61 19 59536309 59536327 TCACAGTCTCAGTCTTACG 58 59538385 59538403 ATTTCGTTCTCCGGTTCTG 59 NA DesignNoJunction Mus musculus 50 Sh2d5 ENSMUSG00000045349 ENSMUST00000105822 2 1 5 82 4 137810200 137810218 TTTCCTGTGGATGACTTGG 59 137810264 137812641 TACAGGATATGGACCTGCA 59 NA Mus musculus 50 Npas4 ENSMUSG00000045903 ENSMUST00000113754,ENSMUST00000056129 3 2 2 83 19 4987178 4987326 CTACCCTATCAGTGACACG 58 4987113 4987131 GTTCCTAGGACATAGGCTG 58 NA Mus musculus 50 Eif4g1 ENSMUSG00000045983 ENSMUST00000115463 2 1 6 123 16 20684143 20684161 CAAATTCACAAGGAGGCTG 59 20684248 20684513 AGCCACCATCATTGATAGG 59 NA Mus musculus 50 C77370 ENSMUSG00000046449 ENSMUST00000056502,ENSMUST00000087879 1 2 2 80 X 101283558 101284227 AAACAATGACTCAGAGGACC 59 101283497 101283515 GGTATAGGCTGGATTGGAG 58 NA Mus musculus 50 Spata2 ENSMUSG00000047030 ENSMUST00000109211,ENSMUST00000057627 3 2 2 86 2 167310070 167310666 AGCATCAAGACCTACACTG 58 167310002 167310021 CATGAACCTTAGAATGGCTC 58 NA Mus musculus 50 BC048546 ENSMUSG00000047228 ENSMUST00000116526,ENSMUST00000060574 3 2 2 62 6 128492857 128492875 ACGTTCTGTTCTACTTGGA 58 128491082 128491100 GTTCAATGGAGAAGGTGAG 57 NA DesignNoJunction Mus musculus 50 Dnahc14 ENSMUSG00000047369 ENSMUST00000097446 3 1 2 82 1 183671452 183674869 TGCAGACAAAGAGGAATCG 59 183674915 183674933 TTCTTCCTGCATGTCTGTG 59 NA Mus musculus 50 Olfr685 ENSMUSG00000047794 ENSMUST00000051355 2 1 1 60 7 112329035 112329053 GAATGTTCTCCTTCCTCAC 57 112328993 112329011 AGAACATGGACATGATGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bcl11b ENSMUSG00000048251 ENSMUST00000109891,ENSMUST00000066047 2 2 4 82 12 109227724 109227742 CCCTGATGAAGATGACCAC 59 109155610 109227678 AAGGCTCATCTTTACCTGC 59 NA Mus musculus 50 F2r ENSMUSG00000048376 ENSMUST00000059193 3 1 1 61 13 96374617 96374635 ATTGTGTTCATTGTCAGCC 58 96374574 96374592 ATCCTCAAGACGAACACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr368 ENSMUSG00000049018 ENSMUST00000112941,ENSMUST00000053990 1 2 2 60 2 37187814 37187832 CTGCGATATTCCTCCACTG 59 37187855 37187874 AAGGAGTTCATTGAGACTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr137c ENSMUSG00000049092 ENSMUST00000050518 1 1 2 81 14 45866119 45866138 TGCCATCTCTTTAGTTAGCT 58 45866181 45897068 AGACATACCCTTTGATTCGA 58 NA Mus musculus 50 Txndc14 ENSMUSG00000050043 ENSMUST00000111665,ENSMUST00000053664 1 2 2 83 2 84513755 84515571 AACCATTGATGAGGAGCTG 59 84513690 84513710 GATTGGCAATCATTAGACCAG 59 NA Nonspecific Mus musculus 50 Tor1aip2 ENSMUSG00000050565 ENSMUST00000065673,ENSMUST00000060404,ENSMUST00000111757 1 3 3 92 1 157910743 157910761 GAGACAGAGTTGGTGAAGG 59 157910817 157911841 AAACACGGAACCATAGGTC 59 NA Mus musculus 50 Ptges ENSMUSG00000050737 ENSMUST00000102852,ENSMUST00000056046,ENSMUST00000113591 1 3 3 67 2 30756406 30756424 TATTACAGGAGTGACCCAG 57 30748317 30748335 TAGATTGTCTCCATGTCGT 57 NA DesignNoJunction Mus musculus 50 Tubgcp6 ENSMUSG00000051786 ENSMUST00000109353,ENSMUST00000041656 2 2 3 60 15 88938399 88938418 GGAAGACCATCAACCTACTG 59 88937970 88937988 ACATCAGACCAACAAAGGT 59 NA DesignNoJunction Mus musculus 50 Fes ENSMUSG00000053158 ENSMUST00000080932 1 1 2 80 7 87526536 87526555 AAGCAGGAGTATGTACTGTC 58 87526162 87526493 CCGGTACAGGTTATCTGAG 58 NA Mus musculus 50 Tcf4 ENSMUSG00000053477 ENSMUST00000114985,ENSMUST00000114982,ENSMUST00000078486,ENSMUST00000114980 1 4 7 103 18 69508790 69621526 CTGGCTCAAATGTAGAAGAC 58 69625019 69625037 CATGTGGTCATAGGGAGTC 59 NA Mus musculus 50 Srcap ENSMUSG00000053877 ENSMUST00000084563,ENSMUST00000066582,ENSMUST00000098025 2 3 3 96 7 134663260 134663278 TTCAGCTTATCCCATGCTG 59 134663338 134664999 TTTCAGCTTCATGTTTGGC 59 NA Mus musculus 50 4933409G03Rik ENSMUSG00000053896 ENSMUST00000102713 2 1 2 80 2 68430818 68430837 GACAGTGGTAACTCTAGGGA 59 68430878 68439804 CTCCTCTACAGACAAATCCAG 59 NA Mus musculus 50 BC042720 ENSMUSG00000055567 ENSMUST00000114009 1 1 5 80 1 66664832 66666006 ATCAGGTTTCAGGTGATGAG 59 66666048 66666067 CATCTCCTCTGTCAGAATCG 59 NA Mus musculus 50 Dach1 ENSMUSG00000055639 ENSMUST00000069334,ENSMUST00000110812 3 2 3 102 14 98315182 98369037 ATTCAAGTGTTGGACTGGA 58 98315098 98315116 TTCATCTGACTCATTGCCA 58 NA InUTR Mus musculus 50 Atpbd4 ENSMUSG00000057147 ENSMUST00000102542,ENSMUST00000055144 1 2 3 97 2 114345525 114348788 GATTGTTGTGGACTCTTCAG 58 114345447 114345465 CTTTCTCTTCCAAGTGCAG 58 NA Mus musculus 50 Pkn1 ENSMUSG00000057672 ENSMUST00000095082,ENSMUST00000109817,ENSMUST00000109818,ENSMUST00000005616 3 4 4 85 8 86208586 86208604 AGAAGGTGCCAAGAATGTC 59 86208100 86208537 TCAATTTCTCCTGAGCCTC 58 NA Mus musculus 50 Camk2b ENSMUSG00000057897 ENSMUST00000093355,ENSMUST00000109812,ENSMUST00000066431,ENSMUST00000002817,ENSMUST00000101586 3 5 10 107 11 5888988 5889006 GGAGACTGTGGAATGTCTG 59 5882749 5888106 AGTAAACTCTTGGCTGCTG 59 NA Mus musculus 50 Bcas3 ENSMUSG00000059439 ENSMUST00000108062,ENSMUST00000108061,ENSMUST00000108056,ENSMUST00000108058,ENSMUST00000100679,ENSMUST00000100678,ENSMUST00000108057,ENSMUST00000074875,ENSMUST00000092821 2 9 12 81 11 85179119 85184567 AGATCTGAACGACACATCAC 59 85184610 85184629 GATCATAACCAGCAGAGGAG 59 NA InUTR Mus musculus 50 Plac8l1 ENSMUSG00000059455 ENSMUST00000081374 1 1 1 68 18 42352247 42352265 CTTCAGTGTCTGCAGAGAC 59 42340034 42340052 TCACACTCAAGACACATGG 59 NA DesignNoJunction Mus musculus 50 Mbtd1 ENSMUSG00000059474 ENSMUST00000107853,ENSMUST00000063718,ENSMUST00000107854,ENSMUST00000021221,ENSMUST00000063645,ENSMUST00000107852 3 6 7 80 11 93782733 93782751 TTCCCAATACAGACTGCAG 59 93782794 93784474 AAAGGGCATTATAACCTGCT 59 NA Mus musculus 50 Znhit1 ENSMUSG00000059518 ENSMUST00000034953,ENSMUST00000085941 2 2 2 65 5 137460812 137460830 GACAACTTCCAGGATGACC 59 137460765 137460783 ATCAAACTGAGGTAGCCTC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Armc9 ENSMUSG00000062590 ENSMUST00000113309 2 1 3 140 1 88153807 88153825 AGACCATCTCATTTCTCCC 58 88153928 88158623 TCCATAACTGATGAAGAGGA 57 NA Mus musculus 50 Rpl27 ENSMUSG00000063316 ENSMUST00000085947 2 1 3 81 11 101304958 101304977 TAACTACAACCACCTCATGC 59 101305305 101306543 CACAGAGTACCTGAAACCC 59 NA Mus musculus 50 Ddo ENSMUSG00000063428 ENSMUST00000044351 1 1 4 125 10 40357215 40357233 TTTCGAAAGATGACAGAGG 57 40357322 40393504 GGTCTCAAATGACCTTCTC 57 NA Mus musculus 50 Chd4 ENSMUSG00000063870 ENSMUST00000112390 2 1 3 111 6 125050511 125050530 TTTATCCGAAGCAGAGACTC 59 125050603 125050810 GCATAAGAGTAAACGCTCCT 59 NA Mus musculus 50 EG328479 ENSMUSG00000064052 ENSMUST00000081580 2 1 1 72 14 122836075 122836093 TCTGTCCTCAACTTTCTGC 59 122835906 122835925 ACACATGAAAGAGAATTGGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Zfp69 ENSMUSG00000064141 ENSMUST00000106280,ENSMUST00000106281,ENSMUST00000060000 3 3 4 108 4 120607749 120607767 ACTTATCCCAGGAGGAGTG 59 120607024 120607677 AGTTGATATCCTGCCACTG 59 NA Mus musculus 50 MGI:2682933 ENSMUSG00000066113 ENSMUST00000048885,ENSMUST00000107178 2 2 4 156 4 85862970 85873859 TCATCAAGATCCATGACTTGG 59 85878475 85878493 CGTAGATCATAGCACTCGG 59 NA Mus musculus 50 Dazap1 ENSMUSG00000069565 ENSMUST00000105362,ENSMUST00000092305,ENSMUST00000105361 2 3 3 89 10 79740414 79740982 AGAAGTTTGGAGTGGTCAC 59 79743679 79743700 CGTCCTCGAAAGTAATAAATCC 58 NA Mus musculus 50 Ank3 ENSMUSG00000069601 ENSMUST00000092432 1 1 7 80 10 69443590 69444873 GATGATGAGGCTGAGAAGG 59 69444916 69444935 TTCAGTCAAGTAGCTGTAGC 59 NA Mus musculus 50 Arid1b ENSMUSG00000069729 ENSMUST00000092723 3 1 3 88 17 5311868 5311887 GTGAGTCCAAATTGTCTGTG 59 5311938 5318652 AGAGCTGGACTTCTTTGAC 59 NA Mus musculus 50 Rbm47 ENSMUSG00000070780 ENSMUST00000113726,ENSMUST00000113724,ENSMUST00000094757,ENSMUST00000094756 3 4 4 61 5 66416197 66416215 CAGTTGCCATTAAACCTGG 59 66414035 66414053 GAACATGGAGTACTGAGCA 58 NA DesignNoJunction Mus musculus 50 ENSMUSG00000072735 ENSMUSG00000072735 ENSMUST00000096178,ENSMUST00000100895 1 2 2 117 14 7842486 7843181 TCCTACAGCATTAAGGAGGA 59 7842388 7842406 GACACTTATAGCCAGCCTG 59 NA Mus musculus 50 Nfxl1 ENSMUSG00000072889 ENSMUST00000087216,ENSMUST00000074948 1 2 2 60 5 72932107 72932125 GTGGTCATAAATGCTTGCT 58 72931865 72931883 ACCATCTTTGGACAAGGAG 59 NA DesignNoJunction Mus musculus 50 Ott ENSMUSG00000072925 ENSMUST00000112761,ENSMUST00000101184,ENSMUST00000112763,ENSMUST00000112765,ENSMUST00000112769 1 5 5 80 X 145555165 145564372 AAATTGACAGATCGTCTGCA 59 145564412 145564433 GTTCAACTGTCTCATTTCTTCG 59 NA Nonspecific Mus musculus 50 4933414I15Rik ENSMUSG00000072983 ENSMUST00000109123,ENSMUST00000101256 3 2 2 60 11 50755916 50755934 CCACAATTTGTCTCCAGAG 58 50755874 50755895 CTAAGATAGAGGGAATCTGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm114 ENSMUSG00000074749 ENSMUST00000099278,ENSMUST00000109980 2 2 2 95 2 146686909 146689452 ATAAGTGCAGAGCTAAGCTG 59 146689510 146689528 ATCCTTGGTTTCGAACCTG 59 NA Mus musculus 50 Gpx4 ENSMUSG00000075706 ENSMUST00000105372,ENSMUST00000097227 3 2 2 95 10 79517780 79517799 GCAAGATCTGTGTAAATGGG 58 79517857 79518678 ATTTGATGGCATTTCCCAG 58 NA Nonspecific Mus musculus 50 IGKV9-124 ENSMUSG00000076511 ENSMUST00000103312 1 1 1 60 6 67892285 67892305 AAAGAGTCAGTCTCACTTGTC 59 67892245 67892264 TGAAGCCAGCTTAAGTAACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV7-4 ENSMUSG00000076668 ENSMUST00000103477 2 1 1 61 12 115461194 115461212 TTACTACATGAGCTGGGTC 58 115461151 115461169 TAATCAAAGCCAACCACTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001079008.1 ENSMUSG00000078510 ENSMUST00000105763,ENSMUST00000105764 3 2 2 232 4 143555553 143555571 CATACAGGAGAAGAGCGTC 59 143555061 143555079 CCAAATGCAGGTGTTTGAG 59 NA DesignNoJunction Mus musculus 50 NP_001078989.1 ENSMUSG00000078625 ENSMUST00000106914,ENSMUST00000106915 2 2 2 80 4 101661517 101661536 CTCAGCAGAGACTAAGAGTG 59 101661577 101662573 ACATAGTACTCCTTCACACCT 59 NA Mus musculus 50 F930017I19Rik ENSMUSG00000078630 ENSMUST00000106969,ENSMUST00000106970 3 2 2 87 7 109049802 109050536 CCTGTTAAAGGTCAGATTCTG 58 109049735 109049755 TAGAGTATCCACAGTATGTGC 58 NA Mus musculus 50 A2A668_MOUSE ENSMUSG00000078695 ENSMUST00000107584,ENSMUST00000107585,ENSMUST00000107583 1 3 3 159 11 97547926 97549591 AAGAATCAGCCCTTCTGTG 59 97549714 97549732 GTACCTGCTCACTCTTGTG 59 NA Nonspecific Mus musculus 50 NM_001101804.1 ENSMUSG00000078863 ENSMUST00000108939,ENSMUST00000108940 3 2 3 80 2 177569271 177569290 ATCCTTCTCAGAAGAGTCTC 57 177569002 177569231 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 A2AK42_MOUSE ENSMUSG00000079247 ENSMUST00000111730 3 1 2 118 2 83824848 83824867 CAGACCATTGAATGAACCTG 58 83830741 83830759 CTTCTGTTGTGACCAGAGG 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Narf ENSMUSG00000000056 ENSMUST00000103015 3 1 1 82 11 121112160 121112179 AGAACATGATCCAGAAGCTC 59 121112223 121114005 ATTTAAGCAACCTCTGGGAC 59 NA Mus musculus 50 Chmp1a ENSMUSG00000000743 ENSMUST00000000759 1 1 1 178 8 125732992 125734127 TTCCAGTTGAAGTTCACAG 57 125731922 125731940 ATTCGGAGCCAATTTACAC 58 NA Mus musculus 50 Txnrd3 ENSMUSG00000000811 ENSMUST00000113546,ENSMUST00000000828 3 2 2 80 6 89622206 89622224 GGAATATGGCTGTTGTGGA 59 89622267 89622975 AAGGTGTGATACACTTCCAG 59 NA Nonspecific Mus musculus 50 Sync ENSMUSG00000001333 ENSMUST00000102599 2 1 1 154 4 128971600 128971619 GAAGAGGTTCAACAGTACAG 57 128983700 128983880 AGCATAGCCTTATATGTGGA 57 NA Mus musculus 50 Emd ENSMUSG00000001964 ENSMUST00000096424 1 1 3 115 X 71500344 71500362 GTACAACATCCCTCATGGG 59 71500858 71501090 CATTATAGTCCTTGCTCTGGT 59 NA Mus musculus 50 Rmnd5a ENSMUSG00000002222 ENSMUST00000002292 3 1 1 82 6 71344764 71346857 GACGAATTACCTATTGAAGTGG 58 71344703 71344721 GTTTGCTGACGAAGAATGG 59 NA Mus musculus 50 Btbd6 ENSMUSG00000002803 ENSMUST00000002880 3 1 1 85 12 114215574 114215727 CTTGCTAAAGTACATGTACAGC 59 114215772 114215791 CGATGTACTTCTTAGCAGCA 59 NA Mus musculus 50 Ppp5c ENSMUSG00000003099 ENSMUST00000003183 2 1 1 80 7 17595275 17595295 ATCACCTTCATGAAAGACCTC 59 17594399 17595233 TACTAGGATCTGGTAGGCG 59 NA Mus musculus 50 Dnaja3 ENSMUSG00000004069 ENSMUST00000060067,ENSMUST00000115853,ENSMUST00000115854 2 3 3 80 16 4687299 4687320 GATGATTATTACCAGATCCTGG 57 4687360 4689989 CTTGGCAAGCTGATAATAGG 58 NA Mus musculus 50 Klf5 ENSMUSG00000005148 ENSMUST00000005279 2 1 1 69 14 99701462 99702643 GCGATTATAATGGTTGCAC 57 99702676 99702694 GTATGAGTCCTCAGGTGAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Ampd3 ENSMUSG00000005686 ENSMUST00000005829 3 1 1 80 7 117953409 117954254 CTCTCACATCAGGAGAAGC 59 117954297 117954316 TGTCTTTCGAATGTCATTGC 59 NA Mus musculus 50 Napa ENSMUSG00000006024 ENSMUST00000006181 3 1 1 84 7 16698741 16698829 GAAGAGTCCAACAGCTCAG 59 16698877 16698895 CGATAGCCTTCTGGTACTG 59 NA Mus musculus 50 Homer1 ENSMUSG00000007617 ENSMUST00000080127,ENSMUST00000109490 3 2 10 96 13 94126021 94156304 CCATTTCCACATAGTGCTG 58 94157507 94157525 CTTTGAGGGTAGCTAGCTC 59 NA Mus musculus 50 Id3 ENSMUSG00000007872 ENSMUST00000008016 3 1 1 152 4 135700236 135700254 ATCTCCAAGGACAAGAGGA 59 135700872 135700891 TTAAGATCGAAGCTCATCCA 58 NA DesignNoJunction, InUTR Mus musculus 50 Fzd3 ENSMUSG00000007989 ENSMUST00000072741 1 1 1 80 14 65854761 65858565 GAGTGCAGTAGGTTTCCAG 59 65854699 65854717 TCCTTCAGTTGGATCTCCA 59 NA Mus musculus 50 Ubc ENSMUSG00000008348 ENSMUST00000111388 3 1 2 180 5 125868156 125868176 GATGCAGATCTTTGTGAAGAC 59 125866856 125866874 GTTGTAGTCTGACAGGGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Rdm1 ENSMUSG00000010362 ENSMUST00000010506 1 1 1 98 11 101495202 101496107 ATCGTGGTTCTGGAAAGTG 59 101496167 101496187 CTGGATTAAATTCTGCAGCTC 59 NA Mus musculus 50 Pea15a ENSMUSG00000013698 ENSMUST00000013842 3 1 2 80 1 174130591 174130609 GAAGAGTGAGGAGATCACC 58 174129388 174130547 GAGAGGTTGTCTTTGTCCA 59 NA Mus musculus 50 Anapc1 ENSMUSG00000014355 ENSMUST00000014499,ENSMUST00000110333 2 2 3 80 2 128505303 128505322 CCACTAAATATGGCTTGCTG 58 128504007 128505261 TAGGCAAAGGTTCTCTAGGT 59 NA Mus musculus 50 Lage3 ENSMUSG00000015289 ENSMUST00000114153,ENSMUST00000114152,ENSMUST00000015433 2 3 3 76 X 71598330 71598670 ACAGATTCTCCCTCTTCGT 59 71598272 71598290 GACATCTGGAACTAGGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Vps53 ENSMUSG00000017288 ENSMUST00000056601,ENSMUST00000108419,ENSMUST00000094015 3 3 3 98 11 75860666 75861956 GAAATGATCCTTAAGGTGGTG 58 75860588 75860606 GAAGGTTTCTGAGTTGCAG 58 NA Mus musculus 50 5830472M02Rik ENSMUSG00000017679 ENSMUST00000109408,ENSMUST00000109405 2 2 2 88 2 163439502 163439520 ACATAGTGAACGAACCTCG 59 163439572 163441107 GAGGAAGAACCTGTTAGCA 58 NA Mus musculus 50 Med13l ENSMUSG00000018076 ENSMUST00000100816 2 1 1 81 5 119174094 119174112 TCCTAAACTGCACAGTCAC 59 119174157 119176282 CATCTGGCTCCTCTTAGAC 58 NA Mus musculus 50 Smurf2 ENSMUSG00000018363 ENSMUST00000100310,ENSMUST00000092517,ENSMUST00000103067 3 3 3 80 11 106721105 106726041 CGAGGACAAATTGTAGTAAGTC 58 106721046 106721065 AAACAAACGACTACAGTCCA 59 NA Mus musculus 50 Sgpl1 ENSMUSG00000020097 ENSMUST00000092498 1 1 1 80 10 60566095 60567219 ACTCATAAGTATGGCTATGCTC 59 60566036 60566054 AAAGAACTGGTACGTCCTG 59 NA Mus musculus 50 Ptprb ENSMUSG00000020154 ENSMUST00000020363,ENSMUST00000092167 2 2 2 80 10 115751079 115751097 TACAAAGTTGCCATCACAG 57 115751141 115752108 TGGAGATGGTACTGTAGAG 57 NA Mus musculus 50 Gabrp ENSMUSG00000020159 ENSMUST00000020366 1 1 1 80 11 33467265 33467283 CTCCATGAAGTCACAGTGG 59 33463939 33467222 TGTTGTGATTCTAAGTGCGT 59 NA Mus musculus 50 Prmt2 ENSMUSG00000020230 ENSMUST00000105418,ENSMUST00000099572,ENSMUST00000099571,ENSMUST00000020452 1 4 4 81 10 75688086 75688104 AAGCAACTGGAGGAATACG 59 75685346 75688042 GGTGAAGTTTCAGAGTTCCA 59 NA Mus musculus 50 Zfp607 ENSMUSG00000020420 ENSMUST00000053722 1 1 1 256 7 28647589 28647607 GTTCTCAACACATGGTCTG 58 28650680 28662795 TAACTCCAAATCTGGGCTC 58 NA DesignRelaxed Mus musculus 50 Drg1 ENSMUSG00000020457 ENSMUST00000020741 2 1 1 98 11 3152273 3152654 GTGAGAATTTACACCAAACCG 59 3152195 3152215 CTTCATGCAGAAATCTTCCAC 59 NA Mus musculus 50 Smek2 ENSMUSG00000020463 ENSMUST00000102856,ENSMUST00000020755,ENSMUST00000101439,ENSMUST00000101438 2 4 4 88 11 29096278 29097099 TGAAATTGTAATGGGCATGG 58 29097150 29097168 CCATGGACGGACTAAACTC 59 NA Mus musculus 50 Rgs9 ENSMUSG00000020599 ENSMUST00000020920,ENSMUST00000103062,ENSMUST00000106706 2 3 4 88 11 109109485 109110304 GTCTCTTGGAGGAATTGTC 57 109109415 109109433 TTATCCAAGGATTGCTTGG 57 NA Mus musculus 50 Zc3h14 ENSMUSG00000021012 ENSMUST00000110105,ENSMUST00000110104,ENSMUST00000066979,ENSMUST00000047981,ENSMUST00000057000,ENSMUST00000021399 3 6 6 105 12 100023855 100023875 TTAACACTCAGTGTACGAGAC 59 100023942 100024793 CATCACTCACTGCTCTGAG 59 NA InUTR Mus musculus 50 Ttc8 ENSMUSG00000021013 ENSMUST00000079146,ENSMUST00000085109 3 2 2 81 12 100195569 100199625 TACTACAGGTTAGGAATGTACC 58 100199664 100199685 GAAATGTGTCTACCATTTCCTG 59 NA Mus musculus 50 Nova1 ENSMUSG00000021047 ENSMUST00000021438 2 1 1 87 12 47917927 47917946 ACAGACAATTGTTCAGTTGC 59 47821830 47917877 CCTCTCAGTAGTACCTGGA 58 NA Mus musculus 50 BC002230 ENSMUSG00000021179 ENSMUST00000021596 1 1 1 80 12 101384132 101384151 CTTCAGGACTGATAAGAAGC 57 101382391 101384091 CTCTTGTACCTTGCTATATCC 57 NA Mus musculus 50 Atxn3 ENSMUSG00000021189 ENSMUST00000021606 3 1 1 86 12 103172512 103172530 ATAAGTCGCCAGGAAATCG 59 103171261 103172462 ACTTCTGGAACTACCTTGC 59 NA Mus musculus 50 Exoc2 ENSMUSG00000021357 ENSMUST00000021785,ENSMUST00000102946 2 2 2 80 13 30956809 30959851 GTTTGACTTCAGAGCAGAG 58 30956747 30956766 CTGCTATGTTTAGGAAGGTG 57 NA Mus musculus 50 Syk ENSMUSG00000021457 ENSMUST00000055087 3 1 1 81 13 52737304 52737322 GTAAGAGTGACGTCTGGAG 59 52737367 52738419 CCTTTCATCCCTCTGTAGG 58 NA Mus musculus 50 2310016C16Rik ENSMUSG00000021760 ENSMUST00000022282 1 1 1 75 13 113833490 113835640 GATTCTTCCAAGAAGGAGC 57 113833433 113833451 AGAACTTCACGACTTGTCC 59 NA DesignNoJunction Mus musculus 50 Ube2e1 ENSMUSG00000021774 ENSMUST00000022296 2 1 1 114 14 19116924 19117657 CTCCAAAGGTTACATTTCGT 58 19116829 19116847 ACTTTCGAGATGGTTAGGG 58 NA DesignRelaxed Mus musculus 50 Otx2 ENSMUSG00000021848 ENSMUST00000058010 3 1 1 81 14 49281020 49281039 TACCCAGACATCTTCATGAG 58 49278986 49280979 GATTCTTAAACCATACCTGCAC 59 NA Mus musculus 50 Anxa11 ENSMUSG00000021866 ENSMUST00000022416 2 1 1 60 14 26692340 26692358 TACTCGGGATCTAGTACCA 58 26692382 26693445 TACCTCGGTTTCCAAACTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Nisch ENSMUSG00000021910 ENSMUST00000022469 2 1 1 80 14 32004231 32004249 CCAGCAATATTAAGGAGCA 57 32003000 32004188 CACAATGACTTATCTCCACC 57 NA Mus musculus 50 Gucy1b2 ENSMUSG00000021933 ENSMUST00000022501 2 1 1 80 14 63072214 63072233 TTCCAGAGATTCGGTAAGAC 58 63067091 63072174 GTTGATAAATCCGTACATGGTG 59 NA Mus musculus 50 Slc25a30 ENSMUSG00000022003 ENSMUST00000022580 3 1 1 83 14 76170053 76171253 CCCAGAAGATGAAACCCTG 59 76169988 76170007 TCAGTCGGATTAGCAATAGC 59 NA Mus musculus 50 Ebf2 ENSMUSG00000022053 ENSMUST00000022637 3 1 1 80 14 68030819 68033210 TAACCAAGGATACATCCGC 59 68033253 68033272 TAATTAGATTGCTGAGGCGT 59 NA Mus musculus 50 Rai14 ENSMUSG00000022246 ENSMUST00000090339 2 1 1 82 15 10521361 10521838 CTCAGGATGCTGATTTAAAGAC 59 10519059 10519077 AGTTCCACTTCGTTCTGAG 59 NA Mus musculus 50 Atp6v1c1 ENSMUSG00000022295 ENSMUST00000022904 1 1 1 80 15 38603706 38605787 GCATTTGTAGAAGGTGTGG 58 38605828 38605849 CTCCTGAACTTTATCTTTGCTG 59 NA Mus musculus 50 Slc30a8 ENSMUSG00000022315 ENSMUST00000037240 1 1 1 98 15 52163216 52165082 TACTCATGGAAGGTGTTCC 58 52165144 52165162 AGATGTGTAGACTGTGCAC 59 NA Mus musculus 50 Ecgf1 ENSMUSG00000022615 ENSMUST00000023285 3 1 1 92 15 89206732 89206750 GTTGACAAACACTCCACAG 58 89206020 89206676 GATCATTGGCACCTTACAG 58 NA Mus musculus 50 1700116B05Rik ENSMUSG00000022638 ENSMUST00000023314 2 1 1 167 16 50783644 50783662 GAATCTGGATCTTTCCTGC 57 50784062 50784080 ATGGAGCTTGTGGTAACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bfar ENSMUSG00000022684 ENSMUST00000023365,ENSMUST00000069281 1 2 2 105 16 13699157 13702164 AAGTGAGCTGAAGACAGTG 59 13702232 13702251 GACAAACTGAGGAATAAGCG 58 NA Mus musculus 50 Rabl3 ENSMUSG00000022827 ENSMUST00000023524 1 1 1 89 16 37556956 37556974 AACTATGGGATGTTGGAGG 58 37557026 37560089 AAATGATGCCGTTTACAGAG 58 NA Mus musculus 50 Cbr3 ENSMUSG00000022947 ENSMUST00000039620 1 1 1 90 16 93685322 93685340 CTGAGGTGACACTGAAGAC 59 93685394 93690585 TTCACCACTCTACCATGTG 58 NA Mus musculus 50 Synj1 ENSMUSG00000022973 ENSMUST00000023696 1 1 1 80 16 90974202 90974220 GAAATACTCTCAACAGCGA 57 90971818 90974158 ATGTCTGTTCAGAAACACG 57 NA Mus musculus 50 Tuba1b ENSMUSG00000023004 ENSMUST00000077577 2 1 1 81 15 98763458 98763476 TTCTTCAGTGAGACAGGAG 58 98763263 98763413 GAACTTCATCGATGACCGT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Racgap1 ENSMUSG00000023015 ENSMUST00000023756 2 1 1 80 15 99466609 99466629 GTCAACGATTGATGAATCTGG 59 99464713 99466567 GAAGAATCCCAGTCCAGTG 59 NA Mus musculus 50 Nfatc4 ENSMUSG00000023411 ENSMUST00000024179 3 1 1 108 14 56449393 56449411 CCTGCCAGACTCTAAAGTG 59 56450539 56450796 AGTCAATGTCACCTCACTG 59 NA Mus musculus 50 Prph ENSMUSG00000023484 ENSMUST00000047104,ENSMUST00000024249 1 2 2 82 15 98886857 98887207 TACACGAAGAGGAACTTCG 59 98887253 98887271 CTTCACTGTTGCCTCTACC 59 NA Mus musculus 50 Pcbp4 ENSMUSG00000023495 ENSMUST00000024260 3 1 1 89 9 106364738 106364849 CCAATGATCTGATTGGCTG 58 106364901 106364920 TCCCGATCTTAATATGTGCC 59 NA Mus musculus 50 Smoc2 ENSMUSG00000023886 ENSMUST00000024660,ENSMUST00000115646 1 2 2 93 17 14538578 14540508 TCTAATAGACAGCCCAGGA 58 14540564 14540583 TTAATTGCTCTTTGGTGAGG 58 NA InUTR Mus musculus 50 Vegfa ENSMUSG00000023951 ENSMUST00000071648,ENSMUST00000074629,ENSMUST00000024747,ENSMUST00000113520,ENSMUST00000113519,ENSMUST00000113518 1 6 6 85 17 46168249 46168267 TTTACTGCTGTACCTCCAC 58 46162484 46165309 ACTTGATCACTTCATGGGA 58 NA Mus musculus 50 Qpct ENSMUSG00000024084 ENSMUST00000040789,ENSMUST00000112450 3 2 2 106 17 79476906 79476925 GATTCTCTGTATGGGTCTCG 59 79476994 79478820 AAGACCAACAGATCCATGC 59 NA Mus musculus 50 Pdpk1 ENSMUSG00000024122 ENSMUST00000102927,ENSMUST00000115407,ENSMUST00000115411,ENSMUST00000115408,ENSMUST00000052462 2 5 5 98 17 24238634 24238653 CATTTGATGAGACCTGTACC 57 24237862 24238573 CTGGTTTAAGGTCTCTGTG 57 NA Mus musculus 50 Ihpk3 ENSMUSG00000024210 ENSMUST00000025046 1 1 1 109 17 27294564 27294582 GTATGACGCCTACACAGTC 59 27288180 27294493 TGATGGTACCTTTGTACTTCG 59 NA Mus musculus 50 Snrpc ENSMUSG00000024217 ENSMUST00000071006 2 1 1 89 17 27977444 27979225 ACGATTCTCCATCTGTGAG 58 27979278 27979296 GCTCTTCCATCCATTTCTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Nudt12 ENSMUSG00000024228 ENSMUST00000025065 2 1 1 84 17 59141706 59142761 TAGAGAACAGGTTGTGGAC 58 59141640 59141658 TAACTGATGTGCGATAGCT 58 NA Mus musculus 50 Myot ENSMUSG00000024471 ENSMUST00000115498,ENSMUST00000025349 2 2 2 80 18 44504790 44505674 GACTTTAAAGTAAGTGGACTGC 59 44505715 44505733 GTGCAACTCATCTGATTGC 59 NA Mus musculus 50 Add3 ENSMUSG00000025026 ENSMUST00000111741,ENSMUST00000050096,ENSMUST00000025999 2 3 3 82 19 53306622 53306640 AAGTAAGGAGCAAGACCAC 59 53306686 53307525 TGACTTTCACCAAAGTGGA 58 NA Mus musculus 50 Pnliprp2 ENSMUSG00000025091 ENSMUST00000026081 1 1 1 80 19 58849725 58849743 GTGATAAATCTCTTCCGGC 57 58849787 58851917 GAAGTTGAACTCTTTCCCG 58 NA Mus musculus 50 Cwf19l1 ENSMUSG00000025200 ENSMUST00000026218 2 1 1 80 19 44206651 44207505 AAGTGGAAACTTTGATCTGC 58 44206590 44206609 GTCTTATACTCCTCCCACTC 58 NA Mus musculus 50 Sufu ENSMUSG00000025231 ENSMUST00000111867,ENSMUST00000039922,ENSMUST00000111866 2 3 3 82 19 46499615 46524326 CTTCCAGTCAGAGAACACC 59 46524371 46524390 GCTGAATTCTTGACTCACTG 58 NA Mus musculus 50 Baiap2 ENSMUSG00000025372 ENSMUST00000106233,ENSMUST00000106231,ENSMUST00000026436,ENSMUST00000106234,ENSMUST00000075180,ENSMUST00000103021 1 6 6 119 11 119842767 119843309 AGGTATCTAAGTGCTGCAC 59 119843392 119843410 GTTCTTACTCCCTTGGCTC 59 NA Mus musculus 50 Cnpy2 ENSMUSG00000025381 ENSMUST00000026446 1 1 1 80 10 127763663 127763683 GAGCTTATCGAATTCTTCTCC 58 127763724 127764087 ATGGTCACATAGATCTGTCC 58 NA Mus musculus 50 ENSMUSG00000025450 ENSMUSG00000025450 ENSMUST00000048965 3 1 1 73 13 120262946 120262964 CACCAATCCTCAAATTGGA 57 120262891 120262909 AAGGGCAGTGCTTATATCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lrdd ENSMUSG00000025507 ENSMUST00000026580,ENSMUST00000106005 1 2 2 80 7 148626993 148627082 CTTTCCAGCAAGATGTGAG 58 148626931 148626949 GTGTCCTCACAACTACCTC 59 NA Mus musculus 50 Pde8a ENSMUSG00000025584 ENSMUST00000026672,ENSMUST00000107339 2 2 2 80 7 88453714 88453732 TTATCAGAGTGTGCAATGG 57 88453857 88460004 CCTGGTTATCTGTTTGACTG 58 NA Mus musculus 50 Cd28 ENSMUSG00000026012 ENSMUST00000027165 3 1 1 116 1 60822138 60822156 ACTCAGTCATCTCCTAAGC 58 60822233 60826518 GTTCCTTCTACTATTTGTCCAG 58 NA Mus musculus 50 Col5a2 ENSMUSG00000026042 ENSMUST00000086430 2 1 1 60 1 45478110 45478797 GGAGAAGATGGTGAACCTG 59 45478068 45478086 GTGATCCTGAGAATCCCAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Zfp142 ENSMUSG00000026135 ENSMUST00000027313 1 1 5 80 1 74634189 74634207 CCTCCACTTTACAGACAGG 59 74632261 74634145 TCTCCTAAATGCGTGTAGC 59 NA InUTR Mus musculus 50 Tnp1 ENSMUSG00000026182 ENSMUST00000027374 3 1 1 104 1 73062429 73062447 AGAAAGTACCATGTCGACC 58 73062343 73062361 TTTCTCTTGCTTCCACCTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Cdh7 ENSMUSG00000026312 ENSMUST00000112701,ENSMUST00000068674,ENSMUST00000086681,ENSMUST00000027542 1 4 4 60 1 111890859 111890877 AAGCCATACTTCCAGTCAG 58 111890901 111890919 AGAACTGATTCCAAACCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cdc73 ENSMUSG00000026361 ENSMUST00000018337 1 1 1 80 1 145533133 145538414 ACGGATTGAGGATGAAGAG 58 145533071 145533089 ACGATCCCTTCTTTATGGC 59 NA Mus musculus 50 3110009E18Rik ENSMUSG00000026388 ENSMUST00000027637,ENSMUST00000056038,ENSMUST00000112644 2 3 3 82 1 122047255 122047276 AAACCTGTAGTGTATCATGGAG 59 122047319 122057195 CTCAAAGGGACATCTTGCT 59 NA Mus musculus 50 Srgap2 ENSMUSG00000026425 ENSMUST00000032395,ENSMUST00000097588,ENSMUST00000027683 2 3 3 81 1 133213756 133213774 GAAAGTCCTTCTGGTCCTG 59 133207263 133213714 GAACTGTGATAAGTGATTGAGG 58 NA Mus musculus 50 Rab7l1 ENSMUSG00000026433 ENSMUST00000112386,ENSMUST00000027693 3 2 2 87 1 133767362 133767380 GATGGAAACAGGATCTGGA 58 133767431 133768654 GACAGATCACTCTTGTTGG 57 NA Mus musculus 50 Atp2b4 ENSMUSG00000026463 ENSMUST00000112269,ENSMUST00000112267,ENSMUST00000048953,ENSMUST00000112264 2 4 5 81 1 135623128 135624307 GGTGAAAGGTATCATTGACAG 58 135623067 135623085 AGGTCCATCATTTGTTCCA 58 NA Mus musculus 50 Angel2 ENSMUSG00000026634 ENSMUST00000027947,ENSMUST00000066632,ENSMUST00000110899 3 3 3 83 1 192763028 192764764 ATCACTGGGTTATCATTGTG 57 192764810 192764828 AACCTGGAATGTTTGAAGC 58 NA Mus musculus 50 5630401D24Rik ENSMUSG00000026694 ENSMUST00000028017 1 1 2 80 1 164467452 164468972 CTACTCTTAGAGACTCCACTG 58 164467392 164467412 GAAATGATCGTGAACGAAGAG 59 NA Mus musculus 50 Serpinc1 ENSMUSG00000026715 ENSMUST00000064725 1 1 1 80 1 162925572 162927484 ACCATTTACTTCAAGGGCC 59 162927527 162927546 CCCATCGACCTTATAGAACG 59 NA Mus musculus 50 Gapvd1 ENSMUSG00000026867 ENSMUST00000102800,ENSMUST00000113111,ENSMUST00000028224,ENSMUST00000113103,ENSMUST00000113099,ENSMUST00000113109,ENSMUST00000113101 3 7 7 82 2 34537204 34537223 CTGCATGAACATATCCAGAG 58 34534137 34537159 TCACGGAGATAAACCTCAG 58 NA Mus musculus 50 Stom ENSMUSG00000026880 ENSMUST00000028241,ENSMUST00000091013,ENSMUST00000070938 3 3 3 147 2 35180863 35180882 ATCATCTTTAGACTGGGTCG 58 35177191 35179186 AGTCCTTAGTGAGGACCTC 59 NA Nonspecific Mus musculus 50 Neb ENSMUSG00000026950 ENSMUST00000075301,ENSMUST00000036934,ENSMUST00000069592,ENSMUST00000028318 1 4 6 80 2 52111096 52111114 CACATCATGCCAGATACAC 58 52107317 52111054 GGCAAGTTTATACAGACTCTC 58 NA Mus musculus 50 BC003993 ENSMUSG00000027014 ENSMUST00000111824,ENSMUST00000065889,ENSMUST00000111818,ENSMUST00000111821 1 4 5 116 2 77770811 77774658 CACATGAAGTCCTCTGGTC 59 77769560 77769578 AGAGTAACCTCTATCCCGG 59 NA Mus musculus 50 Meis2 ENSMUSG00000027210 ENSMUST00000110907,ENSMUST00000028639,ENSMUST00000102538,ENSMUST00000110908,ENSMUST00000074285,ENSMUST00000020367,ENSMUST00000110906 2 7 7 129 2 115825885 115825903 AAATATCATGAGAGCGTGG 57 115694524 115747410 TCTGGCATTGATAAACCAG 57 NA Mus musculus 50 Syt13 ENSMUSG00000027220 ENSMUST00000028648 3 1 1 114 2 92781128 92783219 TCAGAACGGTGTAGTTGAG 58 92783296 92783315 CTTCTTCTGGTCATAGTCCA 58 NA Mus musculus 50 Fbln7 ENSMUSG00000027386 ENSMUST00000110324,ENSMUST00000028864 2 2 2 112 2 128720627 128720958 AAGACATCTCCCTTTCAGTG 59 128721033 128721051 TTCAACTTGGAAGGGAGAG 58 NA Mus musculus 50 Ndufb5 ENSMUSG00000027673 ENSMUST00000029217 1 1 1 80 3 32647480 32649960 CTGAGTTACGGTTAAAGGAG 57 32650002 32650021 GGGTTGGAAATTGATACCAG 58 NA Mus musculus 50 Spata5 ENSMUSG00000027722 ENSMUST00000108112,ENSMUST00000029277 2 2 2 81 3 37331189 37332069 TAAGAGTTACGGAATTCCAGC 59 37332112 37332130 AGCCCTAGCAATCATTGTC 59 NA Mus musculus 50 Ufm1 ENSMUSG00000027746 ENSMUST00000029309 2 1 1 98 3 53665183 53667543 TACAAAGTTCTCAGTGTTCC 57 53664163 53664182 AATAATCGCACTTGTAGCTG 58 NA Mus musculus 50 Pdcd10 ENSMUSG00000027835 ENSMUST00000029424 3 1 1 80 3 75331623 75332739 CGTAGAAGAGTACATGATTGAG 58 75331564 75331582 AGAATCTGTTTAAGTGCCC 57 NA Nonspecific Mus musculus 50 Ngfb ENSMUSG00000027859 ENSMUST00000106925,ENSMUST00000035952 1 2 2 179 3 102313719 102313737 GAAATTAGGCTCCCTGGAG 59 102317998 102324047 ATTACGCTATGCACCTCAC 59 NA Mus musculus 50 Tmem59 ENSMUSG00000028618 ENSMUST00000030361 1 1 1 81 4 106860311 106863150 AAGAACAACTCATGTCCCT 58 106863195 106863213 ATCATGTCACTCCAGAACG 59 NA Mus musculus 50 Gale ENSMUSG00000028671 ENSMUST00000102541,ENSMUST00000116275,ENSMUST00000102540 1 3 3 92 4 135521585 135521924 CTCTTTAAGAAGCACAGCT 57 135521979 135521998 TCTATAGTAGTCCAGAGGCT 58 NA Mus musculus 50 Eif2b3 ENSMUSG00000028683 ENSMUST00000106448,ENSMUST00000106447,ENSMUST00000094862,ENSMUST00000070610 3 4 4 88 4 116701152 116717049 AAAGCTTAAGACCGATGTG 57 116717101 116717119 CATAAGCTCTGAACAGGTC 57 NA Mus musculus 50 Wdr65 ENSMUSG00000028730 ENSMUST00000071972,ENSMUST00000081921 2 2 2 80 4 118285574 118285593 ACAAGCATAATGGTCAAGGA 59 118283370 118285531 GGGAAACTCTATCAGGCTC 59 NA Mus musculus 50 Atpbd1b ENSMUSG00000028848 ENSMUST00000030661,ENSMUST00000105899 1 2 2 60 4 133144566 133145690 GAACATCCAGGACAAGGAC 59 133145713 133145732 GCCATTAGCTTTATCCACAG 58 NA DesignRelaxed Mus musculus 50 Casp9 ENSMUSG00000028914 ENSMUST00000030747,ENSMUST00000097805 3 2 2 106 4 141352689 141352707 GTTCTCAGACCAGAAACAC 57 141359763 141361287 AGGGTGTATGCCATATCTG 58 NA Mus musculus 50 Espn ENSMUSG00000028943 ENSMUST00000105658,ENSMUST00000105653,ENSMUST00000105659,ENSMUST00000030785,ENSMUST00000084114,ENSMUST00000070018,ENSMUST00000080042,ENSMUST00000105657,ENSMUST00000103196,ENSMUST00000105656,ENSMUST00000105655,ENSMUST00000105654 2 12 13 71 4 151504881 151504899 CGTTCCTCGTCTTCTACTG 59 151502613 151502631 AAGCTCTGAGTTATCACCC 58 NA DesignNoJunction Mus musculus 50 Gltpd1 ENSMUSG00000029073 ENSMUST00000030950 2 1 2 102 4 155241297 155241315 TTAAAGTCGTCCTGGTCAG 58 155240986 155241233 TTTAGAAACCTGACAAGTCCC 59 NA Mus musculus 50 Gltpd1 ENSMUSG00000029073 ENSMUST00000030950 3 1 2 103 4 155241297 155241315 TTAAAGTCGTCCTGGTCAG 58 155240985 155241232 GTTTAGAAACCTGACAAGTCC 58 NA Mus musculus 50 Rbm19 ENSMUSG00000029594 ENSMUST00000031590,ENSMUST00000111903 3 2 2 85 5 120574710 120574730 TCATTGAATTCCTAGCTCCTC 59 120574777 120576196 CACGAAGACATACCCTGTC 59 NA Mus musculus 50 Col1a2 ENSMUSG00000029661 ENSMUST00000031668 1 1 1 80 6 4487973 4487991 TCTAGAAAGAACCCTGCTC 58 4488034 4488642 GTCAATCCAGTAGTAATCGC 58 NA Mus musculus 50 Eln ENSMUSG00000029675 ENSMUST00000015138 1 1 1 102 5 135197943 135198345 AATTGCCCTATGGAGTAGC 59 135197489 135197507 TACTTGGCTGCTTTAGCTG 59 NA Mus musculus 50 Hyal6 ENSMUSG00000029679 ENSMUST00000031690 3 1 1 90 6 24684986 24690785 TCTCAGAGGAGGATTTAGTG 57 24690836 24690856 TCCGAATATTCATATCCTCCC 58 NA Mus musculus 50 Gcc1 ENSMUSG00000029708 ENSMUST00000090511,ENSMUST00000064377 1 2 2 99 6 28369295 28370297 AGAAATGAGGAAGACAGCC 59 28369214 28369232 TACCTCAGAGATCTGGCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc37a3 ENSMUSG00000029924 ENSMUST00000090243,ENSMUST00000031987 3 2 2 84 6 39297344 39297362 TGAGTAACAACTTCGGGTG 59 39295986 39297297 AGAGTCCCACCTATGATACC 59 NA Mus musculus 50 Cops7a ENSMUSG00000030127 ENSMUST00000112439,ENSMUST00000032220,ENSMUST00000112438 3 3 3 80 6 124912455 124912649 GACTACTTAGCTGAAGCCAG 59 124912394 124912413 AGTGACAACTGACAGATGTC 59 NA Mus musculus 50 Art4 ENSMUSG00000030217 ENSMUST00000032341 3 1 1 102 6 136802886 136802904 CATGAGCACGTATAACTGC 58 136798138 136798156 CGAGATAACAACAGTGACC 57 NA DesignNoJunction Mus musculus 50 Golt1b ENSMUSG00000030245 ENSMUST00000032372 2 1 1 137 6 142342580 142342598 CTGATAGGCATGATCTTCG 57 142344778 142350071 GTCTACGAATGATCTGATTCC 58 NA Mus musculus 50 4632434I11Rik ENSMUSG00000030641 ENSMUST00000032877 1 1 1 92 7 100010022 100010847 CTGGTTTACACAGGTACCT 58 100009948 100009966 TTTCTACTGCTGTGGTCAG 59 NA Mus musculus 50 9130019O22Rik ENSMUSG00000030823 ENSMUST00000049052 1 1 1 180 7 134529137 134530044 AGTTCACTCAGATTGCAGG 59 134528975 134528993 CAAATTGCAGTCGTGACAC 59 NA Mus musculus 50 Col4a6 ENSMUSG00000031273 ENSMUST00000101205,ENSMUST00000033629 3 2 2 82 X 137668667 137668688 GGTTTATCAGGTTTGAAAGGAG 59 137667026 137668624 CCAATGGGACCCTTATCTC 59 NA Mus musculus 50 Taf1 ENSMUSG00000031314 ENSMUST00000101341,ENSMUST00000033676 3 2 2 80 X 98791533 98791551 TGAAGAAAGCATGATGTCC 57 98791595 98794656 CTCCCATAACTGATGTTGC 58 NA Mus musculus 50 Ggn ENSMUSG00000031493 ENSMUST00000098609,ENSMUST00000033886,ENSMUST00000071601 2 3 3 207 7 29958033 29958051 TTTCGAGGTGCTTAATTCC 57 29958877 29958895 CACTCAGGTAGAATGGGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 1700128E19Rik ENSMUSG00000031510 ENSMUST00000033907 2 1 1 60 8 11721695 11721714 AGTCAGCTAAAGTAGCACTG 59 11721737 11721755 CCTTCCACATCGGTAACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rasgrf1 ENSMUSG00000032356 ENSMUST00000034912 3 1 2 80 9 89879176 89886323 CAGATGATCAAGTCTGACG 57 89886366 89886385 CACTTTGCAAGAATTCATGG 57 NA Mus musculus 50 Ctsh ENSMUSG00000032359 ENSMUST00000034915 2 1 1 82 9 89963303 89966666 ATCACACTCAATGACGAGG 59 89966712 89966730 TCTTCAGTCACCTCAAAGG 58 NA Mus musculus 50 Dync1li1 ENSMUSG00000032435 ENSMUST00000047404 1 1 1 80 9 114614218 114614238 CATAGAGGAGTACAAGAAGGG 59 114614279 114615134 CTTGTTTGATCATCCCTGTC 58 NA Mus musculus 50 Nudt16 ENSMUSG00000032565 ENSMUST00000035179 3 1 1 60 9 105032750 105032769 GAATTCCTTCATTGGAGCTG 58 105032709 105032727 AAGTTTCAAGTCCTGAAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Uba7 ENSMUSG00000032596 ENSMUST00000035216,ENSMUST00000075082 1 2 2 80 9 107880637 107880803 ATTGTCAGCCAAGAAACTG 58 107880847 107880865 GTTGGTCACTCAGTTTCTC 57 NA Mus musculus 50 Thsd7a ENSMUSG00000032625 ENSMUST00000046121 3 1 1 80 6 12280984 12281003 CAGAGCTCATCATAGATGGT 58 12277653 12280942 TCAAATAACAGTCACCTGGG 59 NA Mus musculus 50 Phr1 ENSMUSG00000033004 ENSMUST00000039876 2 1 1 80 14 103517304 103517323 CAAGGAGATGATTACGACCC 59 103516423 103517261 ATGTTTGGGACACATCTGG 59 NA Mus musculus 50 Trim33 ENSMUSG00000033014 ENSMUST00000029444,ENSMUST00000106860 1 2 2 80 3 103152250 103152268 GAACGTCTTCTGCTTTACC 58 103152310 103155937 GTAGTTTGGTATCGAAACAGG 58 NA Mus musculus 50 Asprv1 ENSMUSG00000033508 ENSMUST00000043400 1 1 1 60 6 86578564 86578584 AAACTGAGGTTCCTGAAAGAG 59 86578605 86578624 TGAGTCCATTGTAGACATCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Emx1 ENSMUSG00000033726 ENSMUST00000045942 1 1 1 129 6 85144148 85144166 AAGAATCACTACGTGGTGG 59 85153945 85153963 CTTCCTCTTCCAGCTTCTG 59 NA DesignNoJunction Mus musculus 50 Chmp2a ENSMUSG00000033916 ENSMUST00000005711 3 1 1 103 7 13618064 13618082 TGTCCCTCAAGATACAGAC 57 13617903 13617997 GGGTAATTTCAGCTGTCTG 58 NA Mus musculus 50 Scaper ENSMUSG00000034007 ENSMUST00000037408,ENSMUST00000037110,ENSMUST00000098748,ENSMUST00000114279 3 4 4 107 9 55401321 55403901 ATTCATCCAGGACTTTGCA 59 55398633 55398651 AATCTGTTAGCCAGTTCCA 58 NA Mus musculus 50 Cct2 ENSMUSG00000034024 ENSMUST00000047672 2 1 1 80 10 116498406 116498425 CATCATCTCAGGTTGGAGAG 59 116497898 116498364 TCATCAGAACCATGATCCAC 59 NA Mus musculus 50 Lyl1 ENSMUSG00000034041 ENSMUST00000037165 1 1 1 162 8 87226742 87226760 AGTGATAAACCTGGGACAC 58 87226885 87226995 AATGTAGACACTGTTGAGGA 58 NA Mus musculus 50 Serpini2 ENSMUSG00000034139 ENSMUST00000039047 1 1 1 94 3 75053155 75053175 ATCTGAAGTCTATGTCTCCAG 58 75050510 75053099 GAATGTTTATGCCTGTGGA 57 NA Mus musculus 50 2410018M08Rik ENSMUSG00000034173 ENSMUST00000041466 2 1 1 116 5 130376352 130377537 CAGGATTGCAAATGTGGAC 59 130377617 130377635 CCTACTGTGATGGTTGAGG 59 NA Mus musculus 50 Mrps17 ENSMUSG00000034211 ENSMUST00000042191 3 1 1 83 5 130222661 130222679 GGGAAGGTGATTGGTACAG 59 130222723 130223793 GTACTTCAGTAAGTAGGGATCC 59 NA DesignNoJunction Mus musculus 50 Ppp1r1c ENSMUSG00000034683 ENSMUST00000111780,ENSMUST00000090760 1 2 3 83 2 79550079 79550097 AGCATCCCTTGTGATTCTC 59 79596638 79599778 GCATTCTGCGATTCTTGTG 59 NA Mus musculus 50 Gna15 ENSMUSG00000034792 ENSMUST00000043709 2 1 1 102 10 80970823 80972045 GAGAACGATCAGGAGAACC 59 80970739 80970757 TGTTGAGGAAGAGGATGAC 58 NA Mus musculus 50 Arl4d ENSMUSG00000034936 ENSMUST00000039388 1 1 1 60 11 101528085 101528104 TCAAGTTCAAGGAGTTTGTC 57 101528124 101528145 CGGATCTTCTCAGTATTAAAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nubpl ENSMUSG00000035142 ENSMUST00000040090 1 1 2 90 12 53201478 53244963 CAAATGATTCGTCCAAGGC 59 53245017 53245035 TCTGGATTTCCTCTCAGGT 59 NA Mus musculus 50 Abi3bp ENSMUSG00000035258 ENSMUST00000048471,ENSMUST00000096013,ENSMUST00000096012,ENSMUST00000048280 2 4 4 84 16 56677939 56685827 GATACAAGCTATGAATTCCAGG 58 56685871 56685890 ATTCAGTACTGAACGCTACC 59 NA Mus musculus 50 Uchl4 ENSMUSG00000035337 ENSMUST00000039011 2 1 1 60 9 64083381 64083400 CAAGGTGCACTTTGAATCAG 59 64083422 64083441 CATTGATACAGACTCCTCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pdzrn3 ENSMUSG00000035357 ENSMUST00000075994,ENSMUST00000101117 1 2 2 93 6 101103272 101103290 CTGGATGACTTACACATGG 57 101102047 101103215 CTTCCTCATGCTTCTTCTG 57 NA Mus musculus 50 Uba6 ENSMUSG00000035898 ENSMUST00000039373 1 1 1 119 5 86601722 86601740 TGTGCTTTCCTGTGAAGAG 59 86593808 86599590 CTCTGGCGACTGTATAATCC 59 NA Mus musculus 50 Pknox2 ENSMUSG00000035934 ENSMUST00000080754,ENSMUST00000039674 2 2 2 84 9 36743963 36743981 CATCGAGAACTTTGTCCAC 58 36731349 36743915 CTTCACCATCAGATTGTCC 57 NA Mus musculus 50 Oprs1 ENSMUSG00000036078 ENSMUST00000071561 2 1 2 213 4 41687745 41687763 CAGTGGGTATTTGTGAACG 58 41686355 41686373 GGGTAGACGGAATAACACC 59 NA DesignNoJunction Mus musculus 50 Znrd1 ENSMUSG00000036315 ENSMUST00000057564 1 1 2 129 17 37095187 37095207 CCAACTTTCAATCAGACTTGG 59 37094862 37095096 ACCTTCCCTTCACAATCTC 58 NA Mus musculus 50 P2ry13 ENSMUSG00000036362 ENSMUST00000040622 3 1 1 60 3 59013776 59013795 CATGATCTTGAACAAGGAGG 58 59013735 59013753 ACTCTTCAAAGATGCACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Thap11 ENSMUSG00000036442 ENSMUST00000040445 3 1 1 110 8 108380058 108380076 GAAGGAGATGAAGGGTAGC 59 108380150 108380168 TGCTTCTTACGGATGACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nxt1 ENSMUSG00000036992 ENSMUST00000109961,ENSMUST00000047177 1 2 2 113 2 148501261 148501279 TTGAGATGTTGCCTTCCAG 59 148501356 148501374 TCACTGTTCCACAGATGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2410018C17Rik ENSMUSG00000037339 ENSMUST00000045329,ENSMUST00000065119,ENSMUST00000101361 2 3 4 140 5 33950190 33950208 TGTGTATTGGATGGGAGGA 59 33943485 33943503 GTCTTCATAGTCCAGGGAG 58 NA DesignNoJunction Mus musculus 50 Armc3 ENSMUSG00000037683 ENSMUST00000114640,ENSMUST00000049255 3 2 2 80 2 19123432 19157116 CTAAGGATGTGTTTGACCC 57 19157160 19157178 CTTCCTCTGGAGACTTGAG 58 NA Mus musculus 50 D630004A14Rik ENSMUSG00000037845 ENSMUST00000114452 3 1 2 61 9 50578368 50578386 GTGTCCCTTTAGCTGTGAG 59 50578411 50579546 CAAGGAACCTCCTATACCC 58 NA DesignRelaxed Mus musculus 50 Zfp365 ENSMUSG00000037855 ENSMUST00000064656,ENSMUST00000048213 1 2 2 81 10 67352730 67360191 TGAGCATATGCTCACAGAC 59 67351806 67351824 ATGGTTGCAAACAGAATGC 59 NA Mus musculus 50 Als2cr4 ENSMUSG00000038079 ENSMUST00000094918,ENSMUST00000094917,ENSMUST00000087475 3 3 3 81 1 59164360 59164891 CATTTGATAGGACTGACTTTGC 59 59164300 59164319 AAAGAAGCTAAAGCTGTTGG 58 NA Mus musculus 50 Hoxa9 ENSMUSG00000038227 ENSMUST00000048680,ENSMUST00000114425 3 2 2 107 6 52174475 52175538 CCATCGATCCCAATAACCC 59 52174386 52174405 GAAACTCCTTCTCCAGTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Snx25 ENSMUSG00000038291 ENSMUST00000110378,ENSMUST00000041582 1 2 2 80 8 47141474 47143838 CTGAAGAATGCTAACAAGAGTG 59 47141415 47141433 GATTTCCTTGCTTTCCACG 59 NA Mus musculus 50 Foxq1 ENSMUSG00000038415 ENSMUST00000042118 2 1 1 85 13 31651135 31651154 CATACTCCTACATCGCTCTC 59 31651202 31651220 GAGGTACTCGTTGATCTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Spsb2 ENSMUSG00000038451 ENSMUST00000112473 1 1 4 60 6 124759969 124759987 TACATGGGCGAAAGAAGAG 59 124760011 124760029 TGCCAAGAGTAGTGATCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sart1 ENSMUSG00000039148 ENSMUST00000044207 1 1 1 81 19 5381113 5381224 CATCGAGGATAAGATGGCC 59 5381050 5381068 TTTCTCCTTGAAGTCCTGG 58 NA Mus musculus 50 B3galnt2 ENSMUSG00000039242 ENSMUST00000099747 3 1 1 80 13 14083120 14083639 TCTACACTGTTCAGGAAGG 58 14083683 14083701 GATCCTGTATGTGATCTGC 57 NA Mus musculus 50 Ppl ENSMUSG00000039457 ENSMUST00000035672 2 1 1 80 16 5102760 5104551 ACCACCAATTTCACAAAGAC 58 5102699 5102720 GGCTATATTTCTGGTTCAAGTC 58 NA Mus musculus 50 Cplx3 ENSMUSG00000039714 ENSMUST00000045068 2 1 1 127 9 57453796 57453814 GTATCAGAAGCAACTGGTG 58 57450256 57452529 CATCTGTTTCGTTCTTGGG 58 NA Mus musculus 50 Wdr34 ENSMUSG00000039715 ENSMUST00000113711,ENSMUST00000045622 2 2 2 81 2 29887642 29887660 CAAGTACCTGTTTGCTGTG 58 29887479 29887598 AAGTTGTACATCACCTTCCC 59 NA Mus musculus 50 Kmo ENSMUSG00000039783 ENSMUST00000111170,ENSMUST00000040250,ENSMUST00000097458 2 3 3 80 1 177568044 177568062 GGAAGGAGCATTAACTTGG 58 177568106 177569239 GGAAACGATCTGATCTTCC 57 NA Mus musculus 50 Ccdc67 ENSMUSG00000039977 ENSMUST00000115592,ENSMUST00000115593,ENSMUST00000045513 3 3 3 80 9 15368464 15379602 AGTGGAGACAGAATTAGCC 58 15368402 15368420 TTCTTTGGTCTGAAATGGC 58 NA Nonspecific Mus musculus 50 Zc3h12d ENSMUSG00000039981 ENSMUST00000039484 1 1 1 80 10 7582410 7586035 AAATGACAGGTTCATGCCT 59 7586079 7586097 CTTGGCTTCTTGCTTAGGA 59 NA Mus musculus 50 Gnaz ENSMUSG00000040009 ENSMUST00000037813 3 1 1 104 10 74454868 74477613 TATGAGGACAACCAGACGA 59 74477681 74477699 GTTCAGGAAGAGGATGAGC 59 NA DesignNoJunction Mus musculus 50 Ptger3 ENSMUSG00000040016 ENSMUST00000071906 2 1 2 60 3 157268076 157268097 CTAAGAAAGATCCTTCTTCGGA 59 157304694 157304712 TGGAAGCATAGTTGGTGTG 59 NA DesignNoJunction Mus musculus 50 Ythdf2 ENSMUSG00000040025 ENSMUST00000102570,ENSMUST00000040654 1 2 2 218 4 131761613 131766669 CCGAATAATGCATATACTGCC 59 131761415 131761433 AAATGGAGTGCTACCTAGG 58 NA DesignNoJunction Mus musculus 50 Parc ENSMUSG00000040327 ENSMUST00000066026,ENSMUST00000113441 3 2 2 89 17 46659130 46659149 TCTCTTCTACACAATTCGGG 59 46658925 46659079 CTGTTCAGTCTCGGATAGAG 58 NA Mus musculus 50 Olfr56 ENSMUSG00000040328 ENSMUST00000056759 2 1 2 165 11 48931616 48941331 GGTGAGTGTCATTTGTGTC 58 48947818 48947836 GATGAGGAGGACATTTCCA 58 NA InUTR Mus musculus 50 Hipk4 ENSMUSG00000040424 ENSMUST00000108353 3 1 2 72 7 28313654 28313968 TACCTAGCTGAGACCAAGG 59 28314004 28314022 TCTCAATCTGGTCCAAGGA 59 NA DesignNoJunction Mus musculus 50 Tlr8 ENSMUSG00000040522 ENSMUST00000112170,ENSMUST00000112169 2 2 3 112 X 163701744 163701762 AGAGCACATCTTCTTCCAG 58 163683751 163683769 TCAGAATCCATGACTGAGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Efhd2 ENSMUSG00000040659 ENSMUST00000036854 1 1 1 141 4 141417828 141417846 CTTCATCGACCTGATGGAG 59 141416583 141417724 GAAGATCAGAAGGAACTCCC 59 NA Mus musculus 50 Plekhh2 ENSMUSG00000040852 ENSMUST00000047206 3 1 1 80 17 84982817 84982835 TACTCTAAGAGGGTCTGGT 58 84982878 84985648 ACCTAGAGGGAACTTATCCT 58 NA Mus musculus 50 2310008M10Rik ENSMUSG00000041084 ENSMUST00000043937 2 1 1 112 3 130406422 130408876 GGCTTACAGAGTAAACGGA 59 130406328 130406346 GTATGTTTGGTGCATTGGA 58 NA Mus musculus 50 Pla2g5 ENSMUSG00000041193 ENSMUST00000102513,ENSMUST00000102512,ENSMUST00000030524,ENSMUST00000102511 3 4 4 84 4 138360473 138360494 TTAAGAACTATGGCTTCTACGG 59 138357362 138360428 ATCTGACAGCACCAATCAG 59 NA Mus musculus 50 9430028L06Rik ENSMUSG00000041482 ENSMUST00000047480 1 1 1 80 18 63171445 63172292 TGGCTATGGTATCATGGGA 59 63171383 63171402 GAGATCCCACTGAAGAACTC 59 NA Mus musculus 50 2700046A07Rik ENSMUSG00000041789 ENSMUST00000067450 3 1 2 119 18 62914822 62915589 TTTGCTGACAAGGTCTAGG 59 62912929 62912947 AGAAGTGTAGTCCATTGCT 58 NA DesignNoJunction Mus musculus 50 Phlda3 ENSMUSG00000041801 ENSMUST00000038945 3 1 1 110 1 137663232 137663250 CTACTTCACGCTAGTGACC 59 137663323 137663342 TGATTCTTGAACTTGACCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ubash3a ENSMUSG00000042345 ENSMUST00000048656 2 1 1 83 17 31372506 31374084 AGCACATCCTAGAAGAACTC 58 31374130 31374148 CTTCCCACTTCATCCACTC 59 NA Mus musculus 50 Kcnj12 ENSMUSG00000042529 ENSMUST00000089184,ENSMUST00000041944,ENSMUST00000108717 3 3 3 63 11 60882840 60882858 AGTGCAACATTGAATTCGC 59 60882885 60882903 GTAAACATGTCAGCCAGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC038822 ENSMUSG00000044250 ENSMUST00000059433 2 1 1 60 15 97214869 97214889 CATTATGAACTCTTGCCTCTG 58 97214910 97214929 GTAGCTACTCAAGGAATTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 5430405G05Rik ENSMUSG00000044364 ENSMUST00000109872 1 1 2 80 2 151532726 151532745 GGTCCTAGTAGAGAATGAGG 58 151532785 151537386 GATTCTTCCAGACAAACTTAGG 58 NA InUTR Mus musculus 50 Dbx2 ENSMUSG00000045608 ENSMUST00000054244 3 1 1 80 15 95455437 95462716 AGTCACAGGTGAAGATTTGG 59 95455376 95455395 ACCTACTGGAGAGTACTTCC 59 NA Mus musculus 50 Pqlc3 ENSMUSG00000045679 ENSMUST00000054536,ENSMUST00000067572 3 2 2 83 12 17000371 17002429 CTTGGCCATGAACTTATGC 59 17000306 17000325 CCTGAATCTTGTACCTTCCA 59 NA Mus musculus 50 Snx12 ENSMUSG00000046032 ENSMUST00000101360,ENSMUST00000077876 3 2 2 80 X 98409851 98410829 ATAGTAAGATCGTAGTACCACC 58 98409792 98409811 CAAAGATCCCTTCATCTCCT 58 NA Mus musculus 50 Olig1 ENSMUSG00000046160 ENSMUST00000056882 3 1 1 136 16 91270125 91270143 TACTATGCGATTTCCCAGG 58 91270243 91270261 GAGGATGAGGAGATAGGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rbm16 ENSMUSG00000046201 ENSMUST00000076734 3 1 2 81 17 3185803 3185821 CGACAAGATTCATTTCGGG 58 3185866 3187598 CCCAGGCAATCTTAATGAC 58 NA Mus musculus 50 Pnma2 ENSMUSG00000046204 ENSMUST00000089236 3 1 1 118 14 67534275 67534601 AACACATGAACAGGAGTCC 59 67534683 67534701 CCATCTCCTGGTTTCTGTC 59 NA InUTR Mus musculus 50 AI646023 ENSMUSG00000046807 ENSMUST00000051129 3 1 1 111 10 75018734 75018752 TCATCTACCACCTCACTCC 59 75016812 75016830 GAAAGATCCACAGTCTCCC 59 NA DesignNoJunction Mus musculus 50 Gltpd2 ENSMUSG00000046811 ENSMUST00000057685 1 1 1 115 11 70333378 70333485 CTACTTAGGTTCCTAACTCCC 58 70333562 70333580 GTGTAGTGTGAAGCATTGG 58 NA Mus musculus 50 Gltpd2 ENSMUSG00000046811 ENSMUST00000057685 3 1 1 117 11 70333376 70333484 AACTACTTAGGTTCCTAACTCC 58 70333562 70333580 GTGTAGTGTGAAGCATTGG 58 NA Mus musculus 50 Flrt2 ENSMUSG00000047414 ENSMUST00000057324,ENSMUST00000110117 3 2 2 60 12 97017998 97018016 CCAACCTGAAACAACTCAC 58 97018040 97018058 CATTTAATGCTGCAGTCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Efna5 ENSMUSG00000048915 ENSMUST00000076840 2 1 2 112 17 62963240 63000198 CTACATCTCCTCTGCAATCC 59 62962707 62962726 AAACACGATCATGAACACCT 59 NA Mus musculus 50 Bmyc ENSMUSG00000049086 ENSMUST00000061483 2 1 1 100 2 25562701 25562719 GATAGCTTCTCCATCGCAG 59 25562782 25562801 ATGTTCTTCACGAAGGTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 AI427122 ENSMUSG00000049493 ENSMUST00000093800 1 1 1 97 9 95661846 95662362 TGATGAGAAGATACACGCTG 59 95661768 95661786 TTTAAGGGTCTGGTTGACC 59 NA Mus musculus 50 Fzd9 ENSMUSG00000049551 ENSMUST00000062572 1 1 1 60 5 135725340 135725359 AAATCTTCATGTCCTTGGTG 58 135725299 135725317 GTCTTGGAACTCCATACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2610027C15Rik ENSMUSG00000050212 ENSMUST00000052876,ENSMUST00000106152,ENSMUST00000106150 3 3 3 98 4 125826657 125826675 AAGATGAGGACACCATGAC 58 125826735 125826755 TGAAGACATTGACACTAAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1110014K08Rik ENSMUSG00000050628 ENSMUST00000057676 2 1 1 139 11 116300185 116300203 AGATGTCAAGACTTGGCTG 59 116300306 116300324 TGGGAACTCAATCCAAAGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Emilin3 ENSMUSG00000050700 ENSMUST00000109454,ENSMUST00000057169 2 2 2 219 2 160735562 160736491 CCTTCAACAGTCAGGTACC 59 160735361 160735379 CTCTGCTGTAAGGAGAAGG 59 NA DesignRelaxed Mus musculus 50 NM_028157.2 ENSMUSG00000050876 ENSMUST00000066510 2 1 1 94 13 59805305 59805323 TCGCGTATGTAACAAAGCA 59 59805227 59805247 GGTAGATGGCAAAGAGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Vtcn1 ENSMUSG00000051076 ENSMUST00000054791 1 1 1 101 3 100692276 100692294 CTGTGCTCTACAATGTCAC 58 100692359 100696483 TGACCTCTGAATCTGTCAC 58 NA Mus musculus 50 Cxx1c ENSMUSG00000051851 ENSMUST00000114827,ENSMUST00000063384 3 2 2 60 X 50911464 50911482 GCTATCTCCAGACAGACAG 58 50911505 50911524 TTCATCTCATTCAGGAAGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700011F03Rik ENSMUSG00000051896 ENSMUST00000063456 2 1 1 121 6 70865641 70865659 TATTCTAGAGTCACGCCAC 58 70863583 70863601 CTTCTGAAAGCAGGATAGC 57 NA DesignNoJunction Mus musculus 50 1700024B05Rik ENSMUSG00000052334 ENSMUST00000064162 1 1 1 82 14 42576216 42576915 TGATTCCTACAGCATCAGG 58 42576961 42576979 TCTCATTCAGCAACATCCT 58 NA Nonspecific Mus musculus 50 Adh6a ENSMUSG00000053054 ENSMUST00000106247 3 1 1 266 3 137976310 137981224 TGAATACCCTGGGAAAGAC 58 137985992 137987850 CTTTATCTCCTGGTTTCATGG 58 NA DesignRelaxed Mus musculus 50 NP_796337.1 ENSMUSG00000053338 ENSMUST00000065703 1 1 1 80 7 3497606 3497624 TTTACTATCAGGCAAAGGC 57 3496861 3497562 GCAGATGGTTGTCTATCAC 57 NA Mus musculus 50 ENSMUSG00000053651 ENSMUSG00000053651 ENSMUST00000066215 3 1 1 80 3 118137960 118137979 GTTTAAGGTGTTCCTTGGAG 58 118138022 118138040 CTAGGGTTGAGTTCTCGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Chchd3 ENSMUSG00000053768 ENSMUST00000066379,ENSMUST00000115091 3 2 2 87 6 32842348 32842366 CTGGAAGAGAAAGACCGAG 59 32802203 32842297 AGAACTCTGAGCTCCTCTC 59 NA Mus musculus 50 Pkp3 ENSMUSG00000054065 ENSMUST00000106039,ENSMUST00000066873 3 2 2 154 7 148273683 148273702 CTTCTACAATGCTACTGGCT 59 148274292 148274389 TTTCCACACTCTTGTCCTC 59 NA Mus musculus 50 Thnsl2 ENSMUSG00000054474 ENSMUST00000074241 3 1 1 88 6 71088789 71089752 ATTGTTGTGGGAACTTCTG 57 71088719 71088738 GGCAACAGAACAATAATGTC 57 NA Mus musculus 50 1810053B01Rik ENSMUSG00000054582 ENSMUST00000067715 2 1 1 80 2 163862878 163862898 ACTCCATTAATGATGAGAGGC 59 163862937 163868068 TACTTTCTGTCATCACCTTAGC 59 NA Mus musculus 50 Klhl18 ENSMUSG00000054792 ENSMUST00000068025,ENSMUST00000084956 1 2 3 127 9 110339944 110339962 TATCATCTGATGCCAGAGC 58 110338722 110339853 ACATTCAGGGAATCACCTG 59 NA Nonspecific Mus musculus 50 Whsc1l1 ENSMUSG00000054823 ENSMUST00000033974,ENSMUST00000084026 1 2 2 80 8 26760161 26770217 AAATTAACACAAGAGGTGCC 58 26770260 26770278 GTTTCTCATGAACCCATGC 59 NA Mus musculus 50 ENSMUSG00000055099 ENSMUSG00000055099 ENSMUST00000068485 3 1 1 60 7 103106992 103107013 GATTTGTGCTATTGCTATTCCC 59 103107034 103107052 GAAACAAGATTCAGGGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sec23ip ENSMUSG00000055319 ENSMUST00000042942 1 1 1 80 7 135896418 135897570 ATCTATAATTCAGTGCAGCC 57 135897612 135897631 GTCATAAAGGTACACATCGT 57 NA Mus musculus 50 Rnf212 ENSMUSG00000055385 ENSMUST00000068946 1 1 1 80 5 109178272 109178290 CTACCACCCAACTCTTCAC 59 109174735 109176443 CATCTCAGGCTTTCTTGCT 59 NA Mus musculus 50 Magea3 ENSMUSG00000055816 ENSMUST00000067254 3 1 2 91 X 151392767 151392785 CTGGAGACTTTGTGGACTC 59 151385136 151392713 GATACCAGGGACCTAAACTG 59 NA Nonspecific, InUTR Mus musculus 50 Tmem150 ENSMUSG00000055912 ENSMUST00000069695 1 1 1 80 6 72306294 72306721 GCATATGGACTGTGTATGC 58 72307045 72307063 AGCAGGATTCATTGTAGGA 57 NA Mus musculus 50 2810407A14Rik ENSMUSG00000055972 ENSMUST00000069809 1 1 1 163 16 87788078 87792773 CACTTCCAGAATGTTCCTG 58 87792900 87792918 TAGTATCTGGCAGACAGAG 57 NA InUTR Mus musculus 50 OTTMUSG00000002038 ENSMUSG00000056008 ENSMUST00000069852 1 1 1 94 11 94565458 94565476 AAACAGAGGCTAAACCCTC 59 94557061 94565400 TTATATCCTTCATCCCGCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cyct ENSMUSG00000056436 ENSMUST00000028430 2 1 1 62 2 76192282 76194144 GAACAAAGGTGTTATCTGGT 57 76192239 76192257 TATTTCTTCGGGTTCTCCA 57 NA DesignRelaxed Mus musculus 50 Gpr173 ENSMUSG00000056679 ENSMUST00000070316 1 1 1 73 X 148802017 148802035 ATACCTTTGCTCACTCACC 59 148782250 148801983 CACTTCCTCTATTCCTATAGCA 58 NA DesignNoJunction, InUTR Mus musculus 50 Gm1381 ENSMUSG00000057068 ENSMUST00000082382 1 1 1 113 5 93014416 93014434 TAAAGAGCAGCTTCAGGAG 58 93016615 93019555 ATCTTCTCAAGGAACCTGG 58 NA Mus musculus 50 Gm1381 ENSMUSG00000057068 ENSMUST00000082382 2 1 1 114 5 93014415 93014433 TTAAAGAGCAGCTTCAGGA 58 93016615 93019555 ATCTTCTCAAGGAACCTGG 58 NA Mus musculus 50 Atp5sl ENSMUSG00000057229 ENSMUST00000077338,ENSMUST00000085953 1 2 2 80 7 26407375 26407393 CATCCAGGAGAAATATGGC 57 26407437 26408829 TTGTCCTGAAACTTCACTG 57 NA Mus musculus 50 Olfr191 ENSMUSG00000057533 ENSMUST00000078517 1 1 1 62 16 59085980 59085998 TTTGTAGTGAGTGCAACCA 59 59085936 59085954 TACATAGCGATCATAGGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 V1rf3 ENSMUSG00000058030 ENSMUST00000077301 2 1 1 60 17 21451097 21451116 ACTAAAGTTCACAGACTGGA 58 21451137 21451157 CAGTAGAGTTAAGAAGTTGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG436523 ENSMUSG00000058119 ENSMUST00000049079 1 1 1 84 6 41346233 41346660 CTTAGCTTTGGTGTCAGTG 58 41346708 41346726 GATAGGAGGCTTCACAGTC 59 NA Nonspecific Mus musculus 50 Spock2 ENSMUSG00000058297 ENSMUST00000072315 1 1 1 92 10 59569376 59569394 AGATTAAGCACTGGAACCG 59 59584261 59584440 TATCCAGAGCTTCATCTCCT 59 NA Mus musculus 50 V1rd11 ENSMUSG00000058399 ENSMUST00000078475 3 1 1 60 7 5835759 5835777 GGGCTAGGGTTATGTTCAG 59 5835717 5835737 CAGCTGTAACAACAATAGCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Taar2 ENSMUSG00000059763 ENSMUST00000079134 3 1 1 114 10 23658401 23660414 GGAAACCTTTGATTGTTCAGAG 59 23660489 23660507 GATCGTGATGAATATGGCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 H2-K1 ENSMUSG00000061232 ENSMUST00000025181,ENSMUST00000087189,ENSMUST00000046131 3 3 4 136 17 34134020 34134038 AATAGTCACTGGAGCTGTG 58 34133440 34133573 GAACCATCACTTTACAATCTGG 59 NA DesignRelaxed Mus musculus 50 Myl1 ENSMUSG00000061816 ENSMUST00000027151,ENSMUST00000113984 3 2 2 95 1 66973271 66976768 GCAATGAAGAGATGAATGCT 58 66973195 66973213 CTTCATAACCTCCCTGGTC 59 NA Nonspecific Mus musculus 50 Sphk1 ENSMUSG00000061878 ENSMUST00000106388,ENSMUST00000106387,ENSMUST00000100201,ENSMUST00000106386,ENSMUST00000063396,ENSMUST00000063446,ENSMUST00000100200,ENSMUST00000106385 3 8 8 132 11 116396299 116396397 TAAACTGATACTCACCGAACG 59 116396568 116396586 TTCCATTAGCCCATTCACC 59 NA DesignNoJunction Mus musculus 50 Trim54 ENSMUSG00000062077 ENSMUST00000013771,ENSMUST00000114638,ENSMUST00000114637 1 3 3 144 5 31434518 31436426 TACAAACGCCAGAAGAGTG 59 31438429 31438449 GGTTTAACAGTTGCTTCTGTC 59 NA Mus musculus 50 Olfr644 ENSMUSG00000062172 ENSMUST00000077417 1 1 1 60 7 111216695 111216716 ACTCTTGTCACTCATCTATCTC 58 111216656 111216674 GATGGAGTAGATGACAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cys1 ENSMUSG00000062563 ENSMUST00000074163 2 1 1 163 12 25352027 25352045 GACTACTCAGAAGAGGAGC 58 25351106 25351638 ATAAACCGAGACCTTGGTG 59 NA InUTR Mus musculus 50 Kcnj15 ENSMUSG00000062609 ENSMUST00000113854,ENSMUST00000037154 3 2 9 180 16 95480040 95513418 AGAAACTTGACTTCCAAAGG 57 95517243 95517261 TTGGTATGCTTCACCAGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Kcnj15 ENSMUSG00000062609 ENSMUST00000113859 1 1 9 142 16 95479936 95479954 TCTTAATTTCCCACCCACC 59 95513496 95517208 CTTTGGACCACTCTGTAGG 59 NA Nonspecific, InUTR Mus musculus 50 Kcnj15 ENSMUSG00000062609 ENSMUST00000113858 1 1 9 126 16 95480431 95480449 ATTTGACAATCTGCCACCT 59 95513496 95517208 CTTTGGACCACTCTGTAGG 59 NA InUTR Mus musculus 50 Ganc ENSMUSG00000062646 ENSMUST00000043755 3 1 1 80 2 120262366 120262384 TCTTACCTGGATTTCACCA 57 120262427 120265044 CGTAGATCCCTGATAAACAG 57 NA Mus musculus 50 Rpl7a ENSMUSG00000062647 ENSMUST00000102898 3 1 1 90 2 26767017 26767035 GAGCTATCCTCTACAAGCG 59 26767089 26767554 TTAAGCAGCTGAGTAGCTG 59 NA Nonspecific Mus musculus 50 Actg1 ENSMUSG00000062825 ENSMUST00000062147,ENSMUST00000089616,ENSMUST00000071555,ENSMUST00000106215,ENSMUST00000106216 1 5 5 114 11 120207836 120207960 GAAGATTAAGATCATTGCTCCC 58 120207743 120207761 ATCATACTCCTGCTTGCTG 59 NA Nonspecific Mus musculus 50 Olfr293 ENSMUSG00000063394 ENSMUST00000081474 2 1 1 60 7 93812955 93812974 ATGTGTATCTAAGACCTCCA 57 93812997 93813015 ACAGAAAGTGTCATCTCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Stk24 ENSMUSG00000063410 ENSMUST00000079817 3 1 1 85 14 121691258 121691276 CATCTACTTGGCGGAAGAG 59 121686576 121691210 TCAGAGAATATCTCTGCAGC 58 NA Mus musculus 50 Nmral1 ENSMUSG00000063445 ENSMUST00000074970 1 1 3 128 16 4713738 4713756 AAGAAGCCAGAAGAGTACG 59 4712540 4713646 TTAATGAACAGGCTTGGCA 59 NA Mus musculus 50 C230062I16Rik ENSMUSG00000063623 ENSMUST00000077142 3 1 1 234 7 30738856 30738874 GAAAGAAGACCCACAAACC 58 30739072 30739090 CTTCTCAGTTGCAAGTTGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Jakmip1 ENSMUSG00000063646 ENSMUST00000043794 1 1 1 85 5 37514574 37516128 TGGAGAAGATTTACAGACTGG 59 37516175 37516193 TTCTAACAGCTCGTTCTGG 59 NA Mus musculus 50 Zfp238 ENSMUSG00000063659 ENSMUST00000094276,ENSMUST00000077225 2 2 2 159 1 179374953 179377239 GGTTATGAAGACAGTATGGAG 57 179377360 179377378 AATACATGCTGCATGAAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 S100a7a ENSMUSG00000063767 ENSMUST00000079286 1 1 1 62 3 90459544 90459562 CTCTTGGATAGTGTGCCTC 59 90461580 90461598 TGTGATGTAGTATGGCTGC 59 NA DesignNoJunction Mus musculus 50 Utp14a ENSMUSG00000063785 ENSMUST00000080713,ENSMUST00000114979 2 2 2 80 X 45616202 45616659 AGAGGTTGAACAGATCCAC 58 45616702 45616721 TTCTGAACAACAGAATCCCA 59 NA Mus musculus 50 Olfr393 ENSMUSG00000064228 ENSMUST00000102523 2 1 1 60 11 73661101 73661120 GTGAGAACAATGTGATCCTC 58 73661060 73661078 CAGGACAGCTTTAGGACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 V1rd15 ENSMUSG00000066723 ENSMUST00000086012 1 1 1 60 7 24840213 24840232 TACAGTTGTTGGTTCTTCAG 57 24840254 24840273 GACCAGTGACTTTAATTGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr870 ENSMUSG00000066899 ENSMUST00000086476 3 1 1 61 9 19975813 19975834 CTTCTTTCTATCTAACCTGTCC 57 19975773 19975792 TCTTAGGGACAGTTGTAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Bmpr2 ENSMUSG00000067336 ENSMUST00000087435 3 1 1 81 1 59870530 59870548 TTATGTTCCAAAGGGAGCA 58 59870593 59872093 ACCAACATCCTTGTTTCAC 58 NA Mus musculus 50 EG236749 ENSMUSG00000068113 ENSMUST00000062738 2 1 1 60 X 23483883 23483902 AAGATGAAGCAGTTTGTGGA 59 23483923 23483943 GTTTCACATTACCTACTCCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Htra2 ENSMUSG00000068329 ENSMUST00000089645 2 1 1 114 6 83002706 83002724 TTAGGGAGTTTCTGCATCG 59 83001820 83002473 TCAATAAGGATGCTGGGAG 58 NA Mus musculus 50 Olfr766 ENSMUSG00000069428 ENSMUST00000091994 1 1 1 60 10 128500176 128500194 CTCAATAACTCAGTTGCCC 58 128500134 128500153 CCTGCTTATTCCTTAGAGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 9930111J21Rik ENSMUSG00000069893 ENSMUST00000097494,ENSMUST00000109209 2 2 3 101 11 48761639 48761657 CAATATGGGATTTGCCTGG 58 48761556 48761577 CCGAGATGATAATGAAGAAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mpzl3 ENSMUSG00000070305 ENSMUST00000114664 1 1 2 91 9 44876437 44876456 CCATTGAAGTTTCCGATGAG 58 44878792 44882845 GTCTGAATCCAGACACTCTG 59 NA Nonspecific Mus musculus 50 Rnf213 ENSMUSG00000070327 ENSMUST00000093902,ENSMUST00000082107 3 2 2 90 11 119288976 119289338 GAACTTAAATAGAAGGCGGC 58 119289391 119289409 GAGGAACAGCAGATCATCC 59 NA Mus musculus 50 Olfr43 ENSMUSG00000070377 ENSMUST00000078936 3 1 1 84 11 74020386 74020405 GATAGGCTTGGCAAATACAG 58 74020321 74020339 ATAATGAAGTGGGCGACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001093650.1 ENSMUSG00000070419 ENSMUST00000079268 2 1 1 95 5 146147906 146147925 ATGAGGTTTGCTCTCATCAG 59 146147983 146151297 CTTCACAGGGATCTGTGTC 59 NA Mus musculus 50 Klhl9 ENSMUSG00000070923 ENSMUST00000094993 3 1 1 60 4 88366529 88366549 GAATCACTCATGACACTTTCC 58 88366489 88366508 CATTTGTCTGTATCTGGGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 EG574081 ENSMUSG00000071169 ENSMUST00000095436 3 1 1 63 8 19239924 19239942 CCATTACCTTCTCTTTGCA 57 19239968 19242041 TATTTGGATACAAGCTGCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pvt1 ENSMUSG00000072566 ENSMUST00000100633 2 1 1 80 15 62076399 62080720 ATTAACTAGTTCTGGGTACCTG 58 62080761 62080779 TGGTTTCTAGTTGCATGGT 59 NA InUTR Mus musculus 50 Cphx ENSMUSG00000072678 ENSMUST00000061593 3 1 1 94 14 26771520 26771538 AGAATTTGCATACGCTCCT 59 26771595 26774375 GAAACCAGTTGTCAATCACG 59 NA Mus musculus 50 Ahnak2 ENSMUSG00000072812 ENSMUST00000101010 2 1 1 60 12 114013381 114013399 GTTTCCATAGTGGAATCCC 57 114013339 114013357 TTCTTCCTTTCTCCACGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000017540 ENSMUSG00000073274 ENSMUST00000101675 2 1 1 248 X 18744048 18744197 GGAATGAAATGCAGATAACTCG 59 18735976 18735995 ATTCACATCCTTCCCAAGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 H2-Q6 ENSMUSG00000073409 ENSMUST00000091611,ENSMUST00000113879,ENSMUST00000116599 2 3 4 191 17 35562115 35562133 TTCATTATCGTCGGCTACG 59 35562288 35562306 GTAGTATCTCTGTGCGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pramel4 ENSMUSG00000073724 ENSMUST00000105760 1 1 6 162 4 143654832 143655640 GAGGGAATACAGGCATCAG 59 143655766 143655784 CATCCTTGAAGAGTGGTGG 59 NA Mus musculus 50 Fbxw15 ENSMUSG00000074060 ENSMUST00000056745,ENSMUST00000098360 1 2 2 91 9 109467909 109467927 AACAAGAAAGGGACAAGAC 57 109462430 109467854 AGGTTATAACGCTCTTGTG 57 NA Mus musculus 50 EG632778 ENSMUSG00000074261 ENSMUST00000098663 2 1 1 60 7 26400218 26400236 GGTCACTATCCTGGAAGAG 58 26400176 26400194 TTCAACACAGCTCTTCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp94 ENSMUSG00000074282 ENSMUST00000108436,ENSMUST00000093395 3 2 4 176 7 25094208 25096493 CAAGGTCAAGGAGATGGTG 59 25088853 25088871 ACTTCCTCAAGAGACTCCA 59 NA Mus musculus 50 EG545929 ENSMUSG00000074313 ENSMUST00000098726 1 1 1 152 7 22696930 22700417 CTACAGACTGACAGAAGCTG 59 22695745 22695763 ATCTTCAGATCCTGCTCCA 59 NA Nonspecific, InUTR Mus musculus 50 Vmn2r-ps11 ENSMUSG00000074581 ENSMUST00000099077 3 1 1 84 3 64455711 64455730 AGCACTTGTGACTTATTGGA 59 64447800 64455664 AAGGCAATAGCTCTTTGGG 59 NA Nonspecific Mus musculus 50 1700034I23Rik ENSMUSG00000074620 ENSMUST00000099124 1 1 1 60 3 40658883 40658901 CTTATTGGAGGTGTCACTG 57 40658841 40658859 CCAGCTTTCCAACTTTCTG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Ssbp2 ENSMUSG00000074782 ENSMUST00000099331 1 1 1 105 13 91854466 91854484 TCTCATCCAGGATGAGGAG 59 91854379 91854398 GTTTATGTGCTCACAAACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000015529 ENSMUSG00000074805 ENSMUST00000099381 1 1 1 80 2 129200051 129200480 GATGTGGAAATATACTCAGTGC 58 129200521 129200539 CACCTCAATAATGCTGGAC 58 NA InUTR Mus musculus 50 Gm815 ENSMUSG00000074913 ENSMUST00000099536 3 1 1 82 19 26962335 26962806 GGAATAGCAGTATTGGCTG 57 26962852 26962870 TAAGGCAGATGTTAAACGC 58 NA Mus musculus 50 Olfr1229 ENSMUSG00000075095 ENSMUST00000111549,ENSMUST00000099788 3 2 2 63 2 89122817 89122838 GGATTCTTACACTCTATCATCC 57 89122775 89122793 TATTGGGTCCACAGAAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1040 ENSMUSG00000075203 ENSMUST00000099909 3 1 1 60 2 85986324 85986342 CCTTAATTGCTCTTGCCTG 58 85986282 85986301 GCAATGATTAGCAACATCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cerkl ENSMUSG00000075256 ENSMUST00000099974 1 1 1 80 2 79181502 79181521 CTTGAACATCAGCATCATGG 59 79178786 79181462 TTATGTAATCTGGTGTCAGGTG 59 NA Mus musculus 50 ENSMUSG00000075281 ENSMUSG00000075281 ENSMUST00000100005 3 1 1 62 2 73737310 73737328 GAAAGCATCAAGGCTTCTC 58 73737354 73737372 AATTGTAGTCTCAGCCAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 6030408B16Rik ENSMUSG00000075408 ENSMUST00000071328 3 1 1 113 15 101124004 101124022 AGTTCATTTCTGTGAGGCA 59 101126347 101126365 CACAAGCACAAATAGGGTG 59 NA DesignNoJunction Mus musculus 50 Krt26 ENSMUSG00000075570 ENSMUST00000100482 2 1 1 80 11 99196059 99196078 GAAACGAACTGATGGAACTG 59 99195035 99196016 AGGATTGTTTCATAGCCGT 58 NA Mus musculus 50 Acsf2 ENSMUSG00000076435 ENSMUST00000103164 2 1 1 203 11 94432990 94433554 TATGTCCTCAGAAAGGTAGG 57 94432681 94432699 AATATCATCCAGGAGCAGG 58 NA DesignRelaxed Mus musculus 50 mmu-mir-763 ENSMUSG00000076448 ENSMUST00000103249 3 1 1 70 10 119885120 119885138 GATTAATGACCAGCTGGGA 59 119885068 119885087 TTCCTTGGAGTTAATGGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV3-5 ENSMUSG00000076599 ENSMUST00000103400 2 1 1 60 6 70613800 70613818 GTCTAGGACAGACTTCACC 58 70613841 70613860 ATAGGTTGCAACATCATCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV8-5 ENSMUSG00000076711 ENSMUST00000103520 2 1 1 88 12 116305968 116305987 CTGAGCACTTCTAATATGGG 57 116305899 116305918 TCATCATTCCACCAAATGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV3-3 ENSMUSG00000076849 ENSMUST00000103661 1 1 1 60 14 54286030 54286049 TCTTCAGTTGCTTATGAAGG 57 54286072 54286090 AGTGAATCCTTGTCCTTCG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRAV13-5 ENSMUSG00000076859 ENSMUST00000103671 1 1 1 70 14 54415552 54415570 CAACAGTCACTAAGGGACG 59 54415604 54415622 ATAAGTGCCTGAGTCTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001034217.1 ENSMUSG00000078280 ENSMUST00000105077 2 1 1 60 6 132661313 132661331 TTATGGAGCCACCTTAGGA 59 132661271 132661289 CTGTGCTTATGTCTTTGGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zswim6 ENSMUSG00000078301 ENSMUST00000105097 2 1 1 84 13 108515596 108515615 ATCGGGAAGATTCTATACGT 57 108515531 108515549 TAGTGGTTGTTGGTGTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 AW011738 ENSMUSG00000078349 ENSMUST00000105140 3 1 1 135 4 155577841 155577859 CTGACATCCTGGAGATGAG 58 155577958 155577976 GATTAGGGTTAGGGAGCTG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ctdsp2 ENSMUSG00000078429 ENSMUST00000105256 2 1 2 143 10 126430092 126430110 TGACAGAGCAAGATCAAGG 59 126430959 126432923 TGAGCACATATACCTGGTG 58 NA InUTR Mus musculus 50 NP_001093936.1 ENSMUSG00000078599 ENSMUST00000106572 1 1 1 83 4 111599785 111599803 TGATGAAGCCTGAGTTCTC 58 111599850 111601048 TCAGTTTCTCTGAAGACGC 59 NA Nonspecific Mus musculus 50 Ccl19 ENSMUSG00000078736 ENSMUST00000108008 2 1 1 140 4 42249822 42249840 TAATGAAGATGGCTGCAGG 59 42250161 42250267 CTGTTGCCTTTGTTCTTGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Tgtp ENSMUSG00000078921 ENSMUST00000046745 1 1 1 60 11 48872542 48872560 AGCTGGAAACTAAACTCCT 58 48872500 48872518 GACAGTGAGAATACGTGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001096035.1 ENSMUSG00000079036 ENSMUST00000110154 1 1 1 81 12 88770207 88772354 TTCAGCTTTGGACAGTCTG 59 88770144 88770162 CACTGTGCATAAACATGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Adam34 ENSMUSG00000079058 ENSMUST00000110411 3 1 1 60 8 44737122 44737140 AGGTTCTAGGTGCATTCTG 58 44737080 44737098 TCATGTCTAACACGATTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Prl2c2 ENSMUSG00000079092 ENSMUST00000110594,ENSMUST00000070564 2 2 2 89 13 13089611 13089629 ATCATCTCCAAAGCCACAG 59 13088667 13089558 TCCATTCTGAAGCATGGTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Cnnm3 ENSMUSG00000079611 ENSMUST00000115001 1 1 1 257 1 36578173 36578553 AGCTCATTAAGGTCACACG 59 36582100 36582118 CAAACGCTTGTCCATTTCC 59 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 Mid2 ENSMUSG00000000266 ENSMUST00000000271,ENSMUST00000112993 1 2 4 87 X 137227694 137270985 AAGTTGAGGTGAATACTGCT 58 137271035 137271053 ATTTGTTTCCTCTGCTGGA 59 NA Mus musculus 50 Sec24b ENSMUSG00000001052 ENSMUST00000098616 3 1 2 98 3 129736819 129736837 CTCATCAACAAGAATGCCA 58 129714781 129736758 CTGTCAACACCTTTAGTCTG 58 NA Mus musculus 50 Luzp1 ENSMUSG00000001089 ENSMUST00000105849,ENSMUST00000001116,ENSMUST00000105848 1 3 4 60 4 136097832 136097850 GAGCACACTAAAGTTTGGA 57 136097874 136097892 TTCCCTTAAGTCCACTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Fkbp10 ENSMUSG00000001555 ENSMUST00000107400 2 1 2 196 11 100282384 100283265 TTTGACAACAGCTACTCCC 59 100283961 100283979 ACATCGAAGATGAGCACAG 59 NA Mus musculus 50 Tnk1 ENSMUSG00000001583 ENSMUST00000094063 3 1 6 134 11 69666703 69668650 TTTCTGGAGTGACACTAGC 58 69666363 69666381 GTAGGTCTTGTAACGTTGC 58 NA Mus musculus 50 Foxn1 ENSMUSG00000002057 ENSMUST00000108294,ENSMUST00000002126 1 2 2 80 11 78179535 78180383 CATCTACTCTTACAGCATCC 57 78179474 78179493 TTGTAGATTTCACTGACTGG 57 NA Mus musculus 50 Zfp81 ENSMUSG00000003929 ENSMUST00000054072,ENSMUST00000038373 3 2 3 60 17 33471959 33471978 AACGAACTCATACTGGAGAC 59 33471918 33471936 TGAATACATGCTTTCCCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ptpn6 ENSMUSG00000004266 ENSMUST00000004377,ENSMUST00000112484 2 2 2 80 6 124677809 124678144 AGAACATTCTTCCCTTTGAC 57 124677748 124677766 CATTGATGTAGTCAGAGCC 57 NA Mus musculus 50 Prkacb ENSMUSG00000005034 ENSMUST00000102515,ENSMUST00000005164,ENSMUST00000106140,ENSMUST00000106138,ENSMUST00000106137 1 5 5 80 3 146418646 146418664 AGAGTCATGTTGGTGAAGC 59 146414498 146418602 CAGCTTAACAACCTTCTGC 59 NA Mus musculus 50 Eif2ak4 ENSMUSG00000005102 ENSMUST00000005233,ENSMUST00000102527,ENSMUST00000110874,ENSMUST00000110872,ENSMUST00000110875,ENSMUST00000110870,ENSMUST00000110869 3 7 8 84 2 118274177 118274197 ATGATGAGTCAGATCTTCTGC 59 118274243 118276058 TCAAGAAGTTGCCCTTCAG 59 NA Mus musculus 50 AA536749 ENSMUSG00000005417 ENSMUST00000116371,ENSMUST00000108751,ENSMUST00000073066,ENSMUST00000108753,ENSMUST00000116370 1 5 8 80 11 59585134 59585152 AAAGCAATCCTGACTTCCT 58 59585196 59585663 CAATTACGGACTTGGACCT 59 NA Mus musculus 50 Nr1i3 ENSMUSG00000005677 ENSMUST00000075469 3 1 3 161 1 173147324 173147342 TTGCTACAAGATGGAGGAC 58 173147558 173148735 CTTTGCATACAGAAACCAGG 59 NA Mus musculus 50 Pvrl4 ENSMUSG00000006411 ENSMUST00000111286 3 1 3 185 1 173300323 173300718 GGTCCATACTCTTCCAGAG 58 173300866 173310259 GGAATATTGGCCTGTAAACG 58 NA Mus musculus 50 Cav1 ENSMUSG00000007655 ENSMUST00000115456,ENSMUST00000007799 2 2 5 177 6 17256477 17257896 GAGGGACATCTCTACACTG 58 17258036 17289122 CAAAGTCAATCTTGACCACG 59 NA Mus musculus 50 Eya4 ENSMUSG00000010461 ENSMUST00000074366,ENSMUST00000092665 3 2 2 82 10 22875772 22875793 CACCATCGTCTACTATTTATGC 58 22871889 22875729 GTAGGATGGGTAATCCTGC 59 NA Mus musculus 50 Ttll5 ENSMUSG00000012609 ENSMUST00000095536,ENSMUST00000110219,ENSMUST00000110222,ENSMUST00000040273,ENSMUST00000040179 2 5 6 62 12 87232021 87233073 TCACTGTTGTAGGATTTGTG 57 87233098 87233116 GATAAATTGACCGGTTGGA 57 NA Nonspecific, DesignRelaxed Mus musculus 50 A730008L03Rik ENSMUSG00000013465 ENSMUST00000114367,ENSMUST00000095127,ENSMUST00000059849 1 3 3 80 2 25058708 25058730 CTATACTACGTCCTACACATCAC 59 25056696 25058668 AAACGTTTCCACAAGTCCA 59 NA Mus musculus 50 D16H22S680E ENSMUSG00000013539 ENSMUST00000115628,ENSMUST00000013683 1 2 2 83 16 18302826 18302846 GAGTATGTACAGCCAATTCTG 58 18301630 18302781 GATGATGGTGTTGGTTCTG 58 NA Mus musculus 50 Prdm15 ENSMUSG00000014039 ENSMUST00000095849 2 1 2 80 16 98039866 98039885 AACGGATCATGGAGTTAGTC 59 98038639 98039823 GATGATGTGGGAACTTTGG 58 NA Mus musculus 50 Klra17 ENSMUSG00000014543 ENSMUST00000087985 3 1 2 99 6 129822274 129822294 GGAGATGATCTTCTGAAATCC 57 129815776 129822213 CTGAAGGAATTTCTGGGTG 58 NA Mus musculus 50 Klra17 ENSMUSG00000014543 ENSMUST00000014687 1 1 2 84 6 129818758 129818778 GGATGGCGTAAATGTAAACAG 59 129815778 129818715 GAAGGAATTTCAGTTCATCCTC 59 NA Mus musculus 50 Kif1a ENSMUSG00000014602 ENSMUST00000112958 2 1 2 82 1 94962147 94962634 TATCACTGACACCAACACTG 59 94960815 94960833 CTGAGAGTGAAGATGAGGG 58 NA Mus musculus 50 Elmo3 ENSMUSG00000014791 ENSMUST00000109375,ENSMUST00000093211 3 2 2 81 8 107833412 107833430 TCTCCATCAGCTATGACCA 59 107833475 107833578 GTCCACAGGTAGAAATCCC 59 NA Mus musculus 50 Adamts13 ENSMUSG00000014852 ENSMUST00000102891 2 1 2 88 2 26852356 26852374 CTGTACCTCACTCCAAGTG 59 26852425 26860273 GACTTTCCATCTAGCAGGAC 59 NA Mus musculus 50 Gorasp2 ENSMUSG00000014959 ENSMUST00000112205 3 1 4 145 2 70526522 70527250 ATTACCAAGTCTGATGCCT 58 70527359 70527377 GTAAGGCATGCAACATACC 58 NA Mus musculus 50 Cmah ENSMUSG00000016756 ENSMUST00000050859,ENSMUST00000110391 1 2 3 150 13 24528622 24531004 TACTGAGGAATGGAAAGCC 58 24531115 24548757 CTTAATGTACTTGTCAGATGGG 58 NA Mus musculus 50 Nbr1 ENSMUSG00000017119 ENSMUST00000107212,ENSMUST00000107219 3 2 11 80 11 101434219 101434238 AATTCGATCCCTTACCTTGG 59 101434280 101436325 AAGGCAAATTTCATCTGTGG 59 NA Mus musculus 50 Tnfaip1 ENSMUSG00000017615 ENSMUST00000017759,ENSMUST00000108277,ENSMUST00000100752 1 3 3 67 11 78341031 78341049 CACAGAGAAGAAGCAGACC 59 78338998 78339016 GGACATTGAGTGTTTCCTC 58 NA DesignNoJunction Mus musculus 50 Elmo2 ENSMUSG00000017670 ENSMUST00000103091,ENSMUST00000074046,ENSMUST00000094329 2 3 5 126 2 165119753 165119771 GAAAGAGAAGAGTGCCCTG 59 165116044 165117607 ATCAATCCAGATGCAGTACTC 59 NA Mus musculus 50 1300010M03Rik ENSMUSG00000017802 ENSMUST00000017946,ENSMUST00000107295 3 2 2 82 11 100959925 100960330 GCTCTGAAGACCTAGATGG 58 100959861 100959879 ATCCACGTTAATGGAAGGG 59 NA Mus musculus 50 Smurf2 ENSMUSG00000018363 ENSMUST00000100310,ENSMUST00000092517,ENSMUST00000103067 3 3 3 80 11 106721105 106726041 CGAGGACAAATTGTAGTAAGTC 58 106721046 106721065 AAACAAACGACTACAGTCCA 59 NA Mus musculus 50 Ccdc45 ENSMUSG00000018372 ENSMUST00000018516 3 1 2 92 11 106662878 106666310 CCCAAAGAAGTAATGGTGC 58 106666366 106666384 TCAACATTTCCTCAGGTGG 59 NA Mus musculus 50 Mapt ENSMUSG00000018411 ENSMUST00000100347 3 1 10 115 11 104151301 104156183 AATTACAGCCGAAGAAGCA 59 104163697 104163716 TCTTCTCGTCATTTCCTGTC 59 NA Mus musculus 50 Slc22a16 ENSMUSG00000019834 ENSMUST00000078314,ENSMUST00000019978 1 2 2 80 10 40293898 40301113 CTTTCTGACAGATTTGGAAGG 58 40301155 40301173 AAAGAGGGATGCTATTCCA 57 NA Mus musculus 50 Srgn ENSMUSG00000020077 ENSMUST00000105446,ENSMUST00000020271,ENSMUST00000105445 1 3 3 72 10 61960532 61960550 CCCTCCCATGAATAATCCT 58 61957806 61957827 CCCATAGTCATCATAATTGGAG 58 NA DesignNoJunction Mus musculus 50 Egfr ENSMUSG00000020122 ENSMUST00000102884 3 1 3 85 11 16783606 16787151 TGTACCTATGGATGTGCTG 58 16787200 16787218 GTCTTTAAGATCCACTGCC 57 NA Mus musculus 50 Peli1 ENSMUSG00000020134 ENSMUST00000093290,ENSMUST00000101477 1 2 2 80 11 21042653 21046928 TGTTTCAGATTGGTCGGTC 59 21046971 21046990 CGGAATTACTCTGACTTCCA 59 NA Mus musculus 50 1700058G18Rik ENSMUSG00000020164 ENSMUST00000020371 3 1 1 69 10 115858017 115858035 ATTACTGAGGATGGCACTG 59 115858067 115858086 CTTAGGAGCTCTTTCACTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Acsl6 ENSMUSG00000020333 ENSMUST00000093106,ENSMUST00000108905,ENSMUST00000072178,ENSMUST00000094194 3 4 12 83 11 54150442 54150460 TGATCTTTCCGAGACAGGA 59 54150507 54151923 AGACAACAGACTGGATCAC 58 NA Mus musculus 50 OTTMUSG00000001265 ENSMUSG00000020486 ENSMUST00000084575,ENSMUST00000107962,ENSMUST00000107960,ENSMUST00000018544,ENSMUST00000096206 2 5 9 65 11 87397104 87397428 TGATTCCTCTGAGGATGAC 58 87397457 87397475 TTCCTGTGGACTTGATTGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 1700012B07Rik ENSMUSG00000020617 ENSMUST00000106674,ENSMUST00000020941,ENSMUST00000106672 2 3 3 84 11 109658596 109658614 AGAAGATGAGTCCTCACAG 57 109653047 109653065 TTTATTCTCCGCCTGTGAG 59 NA DesignNoJunction Mus musculus 50 Rdh14 ENSMUSG00000020621 ENSMUST00000020947 2 1 1 60 12 10401806 10401827 TCCATCTATTTAGCCTGTTCAC 59 10401846 10401866 AATCTCCAAAGTACCTTCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sh3yl1 ENSMUSG00000020669 ENSMUST00000110881,ENSMUST00000020997 2 2 3 158 12 31607196 31609633 ATAAGATCATTCCTGCCCAC 59 31611686 31611704 CTATCCCAATGGCTGAAGG 59 NA Mus musculus 50 Psmd12 ENSMUSG00000020720 ENSMUST00000021063,ENSMUST00000106750 3 2 3 85 11 107357009 107357030 GAATTATGGCCAAGTACTACAC 58 107357076 107358852 GAAAGCCTCTGACTCATCC 59 NA Mus musculus 50 Tekt1 ENSMUSG00000020799 ENSMUST00000108502,ENSMUST00000108503,ENSMUST00000021155,ENSMUST00000050911 1 4 4 80 11 72168833 72170997 TTGGAATACAGGGAGAAGC 58 72168771 72168789 GATATCAGCCTCCTTCTGC 59 NA Mus musculus 50 Rph3al ENSMUSG00000020847 ENSMUST00000021208,ENSMUST00000108420,ENSMUST00000108421 1 3 4 60 11 75720027 75720045 CCGTATTCTGCAAAGACTG 58 75714361 75714379 CTTTCTAGGAAGTGCTGCA 59 NA DesignNoJunction Mus musculus 50 9330134C04Rik ENSMUSG00000021470 ENSMUST00000021925 2 1 7 89 13 63936018 63936036 CTTCGTTTAAAGCAGAGGA 57 63936089 63937738 GAATGTTTGCCTGTTAAGC 57 NA Mus musculus 50 Nsd1 ENSMUSG00000021488 ENSMUST00000021944 3 1 3 81 13 55315442 55315461 CAGTCCATTAGGAAACATGC 58 55315505 55346890 CTTCTGAGGAACAAATGGC 58 NA Mus musculus 50 Vcan ENSMUSG00000021614 ENSMUST00000109545 2 1 6 90 13 89833097 89851819 TGCTTTAAACGTCGATTGAG 58 89833026 89833044 CTGTTTCTTCACTGCAAGG 58 NA Mus musculus 50 Nde1 ENSMUSG00000022678 ENSMUST00000023359,ENSMUST00000115794 1 2 3 123 16 14190211 14190231 ACTTCATGTATGATCAGTCCC 59 14190316 14191819 TTTCCTGACCCTTTATCGC 59 NA Mus musculus 50 Dlg1 ENSMUSG00000022770 ENSMUST00000115207,ENSMUST00000023454 1 2 8 80 16 31743286 31743305 CAGAGAAGAACCTGTCAGAG 59 31743346 31781877 GAGGATTTGCCTTTATTGGTG 59 NA Mus musculus 50 Dnm1l ENSMUSG00000022789 ENSMUST00000047122 3 1 4 82 16 16318910 16318929 TAAAGTTCCAAGTGCTTTGG 58 16318561 16318867 CCTGAATTAACTTGCCATCAG 59 NA Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000114002,ENSMUST00000064797,ENSMUST00000116575 2 3 16 82 16 91899851 91899869 AGAGAAGGAGAACTCAGAC 57 91899915 91905547 AATTGAACACCAGTTGCTC 58 NA Mus musculus 50 Ndufa5 ENSMUSG00000023089 ENSMUST00000023851 3 1 1 119 6 24469192 24469211 TGGAAGAGGTGATTCTTCAG 59 24468725 24468743 ATATTGGCCACTTCCACTG 59 NA DesignNoJunction Mus musculus 50 Il15ra ENSMUSG00000023206 ENSMUST00000091456,ENSMUST00000065131,ENSMUST00000114831,ENSMUST00000078834,ENSMUST00000114834,ENSMUST00000114833,ENSMUST00000114832 3 7 7 110 2 11652258 11654780 GGTACATCAAATCAAGGCAG 58 11654853 11654871 CTCCTGTGTCTTCATCCTC 59 NA Mus musculus 50 Gabrr2 ENSMUSG00000023267 ENSMUST00000024035,ENSMUST00000108162 1 2 2 113 4 33168517 33169261 TACAGCATGAGGATTACGG 58 33169524 33169542 ATCTTCATCTGTGTACGCA 58 NA Mus musculus 50 Synj2 ENSMUSG00000023805 ENSMUST00000115791,ENSMUST00000061091 2 2 7 62 17 6028576 6029707 AACATACAAAGACGACGCT 59 6029733 6029751 AAATTCCCAGCAACTTCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Tbc1d5 ENSMUSG00000023923 ENSMUST00000024717 2 1 3 114 17 50935313 50939206 TACAGTTGAACAAAGGCGA 59 50921716 50921735 CTTGGAGATGAACTGATGGT 59 NA Mus musculus 50 E4f1 ENSMUSG00000024137 ENSMUST00000056032,ENSMUST00000088493 3 2 2 95 17 24581415 24581504 GTACATTATTGAGGCCACTG 58 24581263 24581281 TTCATGATGTGACTGTCCA 58 NA Mus musculus 50 Brunol4 ENSMUSG00000024268 ENSMUST00000115816 3 1 3 88 18 25645461 25649594 AGTAAATGCTTTGGCTTCG 58 25645391 25645409 TTCATGCCTATCTGGAAGC 59 NA Mus musculus 50 Col11a2 ENSMUSG00000024330 ENSMUST00000114258 1 1 7 81 17 34182728 34182748 CTCTACTATGACTACGAACCC 58 34182791 34184058 GAAGATCTGTCTGCTCCTG 59 NA Mus musculus 50 Mrps18b ENSMUSG00000024436 ENSMUST00000113782 2 1 2 154 17 36049344 36053250 CCTATGTAGCTCAGAATGTG 57 36047888 36048368 GTAACTGAGAAGACCACAC 57 NA Mus musculus 50 Ms4a7 ENSMUSG00000024672 ENSMUST00000067532,ENSMUST00000056035,ENSMUST00000025574 3 3 3 80 19 11402534 11407708 ACAGTTCTTGGAACCATCC 59 11402472 11402490 GAAGTAGGAAGCTGACACC 59 NA Mus musculus 50 Men1 ENSMUSG00000024947 ENSMUST00000113504,ENSMUST00000056391,ENSMUST00000113502,ENSMUST00000079327,ENSMUST00000113503,ENSMUST00000113500,ENSMUST00000078137 3 7 7 96 19 6337506 6337606 GGACATCTGGAAAGATACCC 59 6337665 6337683 GATAAAGGGTGAGTGGGTC 59 NA Nonspecific Mus musculus 50 Habp2 ENSMUSG00000025075 ENSMUST00000078284,ENSMUST00000095948 3 2 2 80 19 56388712 56389726 CTGTACCGACATAAACACC 57 56389770 56389788 GTCTGTTCATGGGATTCTG 57 NA Mus musculus 50 Ablim1 ENSMUSG00000025085 ENSMUST00000111529,ENSMUST00000111528,ENSMUST00000111526,ENSMUST00000036802,ENSMUST00000111544 3 5 15 143 19 57135854 57135872 GGTTATCAAGATGTCCGGG 59 57123986 57135747 GTTGATCCCTTGATCAGGT 58 NA Mus musculus 50 Maged2 ENSMUSG00000025268 ENSMUST00000112700,ENSMUST00000112699,ENSMUST00000026302,ENSMUST00000112697,ENSMUST00000112702 1 5 5 140 X 147245465 147245483 GAAGCTACAGTCATCCCAG 59 147244957 147245232 TTCAGCATATCTGAGCGTC 59 NA InUTR Mus musculus 50 Il23a ENSMUSG00000025383 ENSMUST00000026449 2 1 1 87 10 127734149 127734167 CACCTCCCTACTAGGACTC 59 127733978 127733996 CTGACTAGAACTCAGGCTG 59 NA DesignNoJunction Mus musculus 50 Tmem192 ENSMUSG00000025521 ENSMUST00000079896 1 1 2 81 8 67483445 67483463 TATTCCCAGATCTACCGCT 59 67483506 67489455 TGAACCTCCTAATCTTCACAG 59 NA Mus musculus 50 Cdh7 ENSMUSG00000026312 ENSMUST00000112701,ENSMUST00000027542 1 2 4 80 1 111981742 111994860 CCCTGTGAGATATTCAATTGAC 58 111994898 111994919 GTAGTAATAACTCCACTGTTGG 58 NA Mus musculus 50 Ptpn14 ENSMUSG00000026604 ENSMUST00000097442,ENSMUST00000027898 2 2 2 80 1 191648966 191656615 TCTTTCCTATGGATTTGGCC 59 191656657 191656676 TATGAGCTTTGTGTTCCTGG 59 NA Mus musculus 50 Dnm1 ENSMUSG00000026825 ENSMUST00000091089,ENSMUST00000035664 3 2 9 85 2 32179183 32179202 GAAGACTTCATAGGCTTTGC 58 32176127 32178949 TTTCGAATGACCTGGTTCC 59 NA Mus musculus 50 Acvr1c ENSMUSG00000026834 ENSMUST00000028178,ENSMUST00000112608,ENSMUST00000100085 2 3 4 82 2 58137404 58140106 CAGCTGACAACAAAGATAATGG 59 58137343 58137362 ATAGTCATACAAGGAGCCCT 59 NA Mus musculus 50 Acvr1 ENSMUSG00000026836 ENSMUST00000090936 3 1 5 112 2 58311381 58311399 CGATGAAACCATCCAAGTG 58 58296019 58311306 TACACATTTCATTGCTCACC 58 NA Mus musculus 50 Abl1 ENSMUSG00000026842 ENSMUST00000075759,ENSMUST00000113455,ENSMUST00000028190,ENSMUST00000113454 1 4 4 81 2 31640287 31645796 GAAGACCTTGAAGGAGGAC 59 31645840 31645859 GTTAGGGTGTTTGATCTCCT 59 NA Mus musculus 50 Kynu ENSMUSG00000026866 ENSMUST00000028223 1 1 4 111 2 43535490 43536874 AAGAGGAGTCGTTTGTGAC 59 43536949 43536967 TATGGAAGTGAGCAGTCTG 58 NA Mus musculus 50 Inpp5e ENSMUSG00000026925 ENSMUST00000116559 3 1 3 81 2 26254127 26254145 GGATCAAGACTTCAGACCA 58 26252406 26254082 CAGGGACAGTACTTGTCTC 59 NA Mus musculus 50 Sema6d ENSMUSG00000027200 ENSMUST00000103241,ENSMUST00000110503,ENSMUST00000051419,ENSMUST00000103240,ENSMUST00000103239,ENSMUST00000077847,ENSMUST00000078621,ENSMUST00000076335,ENSMUST00000103238 2 9 9 80 2 124481796 124481815 GTCATTTACAGAAGCATGGG 58 124481857 124482576 GAAGTGTGGTTCTTTGATCC 58 NA Mus musculus 50 Slc28a2 ENSMUSG00000027219 ENSMUST00000110525,ENSMUST00000028652,ENSMUST00000110524,ENSMUST00000110526 3 4 4 104 2 122280333 122280433 ATCCTTTGGGATTGATGCA 59 122280501 122280519 TTGGACTCTTCGACTTCTG 58 NA Mus musculus 50 Mtch2 ENSMUSG00000027282 ENSMUST00000111470,ENSMUST00000057216 1 2 5 90 2 90689810 90689828 AAGACTGTGTTCAGGAGTC 58 90693017 90693219 AGATCCTAACTCCTCAGGT 58 NA Mus musculus 50 Rab22a ENSMUSG00000027519 ENSMUST00000109110 2 1 2 88 2 173513657 173513675 TATGACCAAGACTGTCCAG 58 173513727 173520724 CAATACATGATGGCAGTCG 58 NA Mus musculus 50 Zfp64 ENSMUSG00000027551 ENSMUST00000109162 3 1 5 231 2 168760765 168760783 TTCAAGTGCCAGATCTGTC 59 168731638 168732349 AATGACAACCTGGATAGCG 59 NA DesignRelaxed Mus musculus 50 4930558O21Rik ENSMUSG00000027703 ENSMUST00000108267,ENSMUST00000108265 3 2 2 81 3 30558103 30558829 GCCGTACTCGAAATTTGAG 58 30558874 30558892 TTTACCAGGTGATCAAGGT 58 NA Mus musculus 50 Dennd2d ENSMUSG00000027901 ENSMUST00000029508,ENSMUST00000061206 1 2 2 80 3 106297904 106297922 TTATGGACAGTCCCATGGA 59 106301775 106302154 CTTTCTCATCACCAACCGA 59 NA Mus musculus 50 Olfm3 ENSMUSG00000027965 ENSMUST00000081752,ENSMUST00000051309 1 2 2 81 3 114804874 114804895 CTATGAAGAACTTCATCAACGG 59 114804936 114823825 CAATTTGCCACATGTTAGCT 59 NA Mus musculus 50 G430022H21Rik ENSMUSG00000028114 ENSMUST00000090371 1 1 2 179 3 123068057 123075488 TCCAGAGAACAAAGTACCC 58 123067896 123067914 CTGAGGTCACATTCCTGAG 59 NA Mus musculus 50 Rragd ENSMUSG00000028278 ENSMUST00000029946,ENSMUST00000098190 2 2 3 80 4 33083004 33083024 GACCCTACCTTTGACTATGAG 59 33083064 33091137 CATATAGTCATCCTGGGAGTC 58 NA Mus musculus 50 4930417M19Rik ENSMUSG00000028457 ENSMUST00000107942,ENSMUST00000056010,ENSMUST00000102953 2 3 5 81 4 43304588 43315456 AGACAGAAGGAAGAAGAGG 57 43315501 43317531 TGGAATTGTCCGGATACTC 58 NA Mus musculus 50 Npr2 ENSMUSG00000028469 ENSMUST00000030191,ENSMUST00000107877 3 2 3 128 4 43663179 43663267 CATAGGTGTCCATACTGGG 58 43663359 43663592 TGGATCTTTAGAGCTTGGC 59 NA Mus musculus 50 Sgip1 ENSMUSG00000028524 ENSMUST00000097946 1 1 9 254 4 102593997 102594017 ACTCTCATCTCCTAAAGAGTG 58 102600177 102601397 GTCTGGACTATCTCCAACTC 58 NA DesignRelaxed Mus musculus 50 Mknk1 ENSMUSG00000028708 ENSMUST00000097919,ENSMUST00000106513 2 2 4 114 4 115527600 115529642 CAGAACAGACCAGAGATGG 59 115529720 115529738 CTTCAAACTTTCCTGGCAG 58 NA Mus musculus 50 Eya3 ENSMUSG00000028886 ENSMUST00000081726,ENSMUST00000105928,ENSMUST00000105927,ENSMUST00000105926,ENSMUST00000020197,ENSMUST00000079157 2 6 6 80 4 132245639 132245658 CCTGATACCCACTTCATCTG 59 132245701 132248890 TAGGTGGGATAATCCTGGT 58 NA Mus musculus 50 Clcn6 ENSMUSG00000029016 ENSMUST00000094479 1 1 3 83 4 147391078 147392032 CTGAACTTTGGAGTCTTAGAG 57 147391015 147391033 TTCTCCTAACACCATGGAG 58 NA Mus musculus 50 Nadk ENSMUSG00000029063 ENSMUST00000030939,ENSMUST00000105613,ENSMUST00000105612,ENSMUST00000097745 1 4 4 80 4 154962117 154962727 TCGAGCTGAAGATTATGCTG 59 154962770 154962788 GGATTTCCTGTCTCTTCCG 59 NA Mus musculus 50 Bst1 ENSMUSG00000029082 ENSMUST00000101237 3 1 2 85 5 44231716 44233241 TGTATCATGAACTCAGCCTC 59 44233289 44233307 AGAGAAATGAGAAGGCTGG 58 NA Mus musculus 50 C8b ENSMUSG00000029656 ENSMUST00000031663 3 1 2 96 4 104457053 104457071 TATTATGCTGGTGGATGCT 58 104457131 104459418 ATTCACATTTGGTCTGTGG 57 NA Mus musculus 50 Slc37a3 ENSMUSG00000029924 ENSMUST00000090243,ENSMUST00000031987 2 2 2 141 6 39314600 39316896 GTTCTTCAGCTATTCATTGC 57 39310018 39310036 AAATAGATGGTTGCTGCTC 57 NA Mus musculus 50 Gsg1 ENSMUSG00000030206 ENSMUST00000111911,ENSMUST00000111910,ENSMUST00000087729 1 3 3 94 6 135194112 135194130 GCTATCCTGTGAGGAAACC 59 135192177 135192196 GTAGTCCTTTCTCACCTCTC 58 NA DesignNoJunction Mus musculus 50 Srgap3 ENSMUSG00000030257 ENSMUST00000113171,ENSMUST00000113170,ENSMUST00000088373 1 3 5 123 6 112699407 112704575 CGTTCATTAAGGATTCAGGAC 58 112696912 112696930 TTGACTTCAACCTGAGACC 59 NA Mus musculus 50 Tead4 ENSMUSG00000030353 ENSMUST00000006311,ENSMUST00000112157 2 2 2 82 6 128193439 128193457 CATAGCTAGCTCCAAGCTC 59 128192580 128193394 GGTGTTTGTTGTATGTGTCG 59 NA Mus musculus 50 Strn4 ENSMUSG00000030374 ENSMUST00000108495 3 1 2 110 7 17416389 17416407 AACTCCAGGGAATTCTTGC 59 17416479 17416846 TGATGAAGACGTCTTCATGAG 59 NA Mus musculus 50 Tbx6 ENSMUSG00000030699 ENSMUST00000094037,ENSMUST00000073564 3 2 2 115 7 133926854 133926950 CAGAACCCTAGGATCACAC 59 133928065 133928083 CGAAGTTTCCTCTTCACAC 58 NA Mus musculus 50 Itgal ENSMUSG00000030830 ENSMUST00000098028 2 1 2 172 7 134453125 134453707 GGAGTTGGAGGTTACACTG 59 134453843 134454151 GTAAGATCCGATCTGAGTCC 59 NA Mus musculus 50 Arfip2 ENSMUSG00000030881 ENSMUST00000033171,ENSMUST00000084782 3 2 2 130 7 112786435 112786454 AGTATGAAAGTGTCCTGCAG 59 112785784 112786343 AAATTCCTCCTGAAGCTCTG 59 NA Mus musculus 50 9030624J02Rik ENSMUSG00000030982 ENSMUST00000059390,ENSMUST00000033280 3 2 4 203 7 125947667 125947685 CACATTTGCAAGACAATGC 58 125953479 125955327 GTTCACACTATGGATCAACTG 58 NA DesignRelaxed Mus musculus 50 Enox2 ENSMUSG00000031109 ENSMUST00000114911 2 1 6 102 X 46372068 46376318 GACGACAATTTACAGCAGG 58 46371984 46372002 ATTTGACAGGATTGCTGAC 58 NA Mus musculus 50 Ftsj1 ENSMUSG00000031171 ENSMUST00000115594 2 1 3 200 X 7822765 7823472 CCACTCATATGATTTCAACCAG 59 7822465 7822483 TTGATGGAGCATTCTTGGG 59 NA Mus musculus 50 Rpgr ENSMUSG00000031174 ENSMUST00000044598,ENSMUST00000115532,ENSMUST00000115531 1 3 13 81 X 9753173 9753194 GAATTTGAAGGAGACAGAAAGG 59 9743387 9753131 CTGAAAGTTGAGGAGCCTC 59 NA Mus musculus 50 Rpgr ENSMUSG00000031174 ENSMUST00000072393,ENSMUST00000115539,ENSMUST00000115534,ENSMUST00000044598,ENSMUST00000073392,ENSMUST00000115533,ENSMUST00000115536,ENSMUST00000115532,ENSMUST00000115531 1 9 13 80 X 9776155 9779149 AGCTTTGATGACAGAACTAGG 59 9776095 9776114 AAATTCTCCATCCCAAGTCC 59 NA Mus musculus 50 Piga ENSMUSG00000031381 ENSMUST00000033754,ENSMUST00000112255,ENSMUST00000112257,ENSMUST00000073093 1 4 4 73 X 160866905 160866923 AAGACTTTCTACACCTGGC 59 160869572 160869590 ACAGTTTCCTTCGACACTC 59 NA DesignNoJunction Mus musculus 50 Cog2 ENSMUSG00000031979 ENSMUST00000093038 3 1 3 182 8 127072442 127072462 ATGTAGACAGTGCAGAAGC 59 127074122 127074140 CTTGTTTGAGGCGTTTCAG 59 NA Mus musculus 50 Usp2 ENSMUSG00000032010 ENSMUST00000034508,ENSMUST00000114830 1 2 3 129 9 43884295 43897225 GAGACACCATGAATTCAAAGAG 59 43898162 43898180 CTCTGGAGGCAGTAATCTC 58 NA Mus musculus 50 Lca5 ENSMUSG00000032258 ENSMUST00000034793,ENSMUST00000113217 1 2 3 97 9 83292189 83292207 GCTAAGTTCAGTGTTGGGA 59 83285472 83292129 AAAGATTACCACTCTCAGGC 59 NA Mus musculus 50 Lrrfip2 ENSMUSG00000032497 ENSMUST00000098339 2 1 3 80 9 111078282 111078302 ATCATTCTTACAGTCACACCC 59 111078344 111079761 CAAAGTAGAGGCCACTCAG 59 NA Mus musculus 50 Cd59a ENSMUSG00000032679 ENSMUST00000040423 3 1 1 72 2 103944363 103944381 ACTCATCTTACTCCTGCTG 58 103950907 103950925 GAAACAGTGGTAGCATGTG 58 NA DesignNoJunction Mus musculus 50 Ank2 ENSMUSG00000032826 ENSMUST00000043741 3 1 5 80 3 126706912 126706931 CAAGAAGATAAGGTGAACGT 57 126705683 126706869 TGTGTAACCAAGCTTTGTG 58 NA Mus musculus 50 Rasgrp2 ENSMUSG00000032946 ENSMUST00000113476,ENSMUST00000113475,ENSMUST00000113472,ENSMUST00000035716,ENSMUST00000113471 3 5 5 80 19 6402507 6402525 CGCATGTTTCTCATGATGC 59 6402568 6403036 GGATTGCTGATAGAAGTGGA 59 NA Nonspecific Mus musculus 50 4931417G12Rik ENSMUSG00000033963 ENSMUST00000070430,ENSMUST00000035870 3 2 2 92 6 113547524 113547543 GACTTACAAGAAGTGCACCT 59 113547331 113547469 ATCGTTGGTCCTGTTTCAG 59 NA InUTR Mus musculus 50 Dnahc17 ENSMUSG00000033987 ENSMUST00000084803 3 1 3 80 11 117949497 117949515 CGCTCAGATCAAATACTCC 57 117948375 117949454 ATGTAGCACCTATCTGTGAG 58 NA Mus musculus 50 Pkd1l2 ENSMUSG00000034416 ENSMUST00000109093,ENSMUST00000040422 2 2 3 91 8 119521560 119521986 ACTATGAAGAGGTCCTGGA 58 119521487 119521508 CAGATTCAGTACCACAAATGTC 59 NA Mus musculus 50 Gjc1 ENSMUSG00000034520 ENSMUST00000092567,ENSMUST00000068933,ENSMUST00000107075 3 3 3 87 11 102664160 102664178 GGTAACAGGAGTTCTGGTG 59 102662446 102662464 TTGTGGATCTCCTCTAGCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Ankrd27 ENSMUSG00000034867 ENSMUST00000085538 2 1 3 171 7 36405401 36405419 CACCTATCCTCTGACAGGA 59 36405679 36412438 AAATCCTGGCCAGTTTCTC 59 NA Mus musculus 50 Pkig ENSMUSG00000035268 ENSMUST00000064703,ENSMUST00000099105,ENSMUST00000109400 3 3 3 200 2 163551257 163551275 GAACACCTCATCCTGAGTC 59 163551439 163551457 GTCTTCAGAGTGAACCTGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Nfkbiz ENSMUSG00000035356 ENSMUST00000114457,ENSMUST00000114458,ENSMUST00000036273 2 3 4 80 16 55815802 55815820 TAAGGAATAAGAGCCTGGT 57 55814452 55815758 CACTCTTACGATCCTTTGC 58 NA Mus musculus 50 L3mbtl ENSMUSG00000035576 ENSMUST00000035751 2 1 2 99 2 162796957 162800134 AAGACGAGATGATTGACGG 59 162800195 162800215 TTATAGATCTTCAAGGCTGGG 58 NA Mus musculus 50 Ibtk ENSMUSG00000035941 ENSMUST00000039213,ENSMUST00000093806 1 2 2 80 9 85607249 85607267 CTATGCAAGTAGAAGACGG 57 85604079 85607206 TCTTGAACATAGTTTCCGAG 57 NA Mus musculus 50 Dgkb ENSMUSG00000036095 ENSMUST00000085447 2 1 3 190 12 38810809 38810830 TGCAATATAATCCTGAAGGG 57 38827102 38841136 CTTATTCATCCTGAGACCAC 57 NA Mus musculus 50 Cyld ENSMUSG00000036712 ENSMUST00000109626,ENSMUST00000043526 2 2 4 80 8 91247097 91253363 GGTACATTGATGAAGTTGCAG 59 91253405 91253423 GTGGAGGAGATGAATGTCC 59 NA Mus musculus 50 Gtdc1 ENSMUSG00000036890 ENSMUST00000112810,ENSMUST00000049051 3 2 5 150 2 44490829 44607577 GATGTGAGCAGATTCATGC 58 44490697 44490715 TTGATTCACAGTTCTCCGG 59 NA Mus musculus 50 Paip2 ENSMUSG00000037058 ENSMUST00000115737,ENSMUST00000115736,ENSMUST00000041314,ENSMUST00000115735,ENSMUST00000115734 2 5 5 85 18 35773087 35773106 TATGGACCAAATCCAAGACC 59 35773154 35775868 TCAGATTGCTCTTGACCAC 59 NA Mus musculus 50 Rab11fip3 ENSMUSG00000037098 ENSMUST00000075024,ENSMUST00000069854 3 2 2 109 17 26128055 26128214 AGACTCAAACAGGACAACC 59 26127964 26127983 GAGAAAGACGTGGAGAAGAG 59 NA Mus musculus 50 Gm1964 ENSMUSG00000037336 ENSMUST00000095877 3 1 3 174 12 4872064 4872082 GAAGAAGTGGTGGTCACTC 59 4870849 4870871 TCTCCTTAAAGTTCAGAAGGC 59 NA Mus musculus 50 Atp11b ENSMUSG00000037400 ENSMUST00000108186,ENSMUST00000029257,ENSMUST00000108185 3 3 3 80 3 35687409 35687427 CCTCAGATCGACTTGATGG 59 35687469 35688492 CTGACACATGTGTCTTTAGGT 59 NA Mus musculus 50 Bclaf1 ENSMUSG00000037608 ENSMUST00000043881 3 1 3 102 10 20054442 20059523 GTACTTCTTGCACGATGAC 58 20059588 20059607 TTTGAAATTAAAGCGCCCTC 59 NA Mus musculus 50 Nek5 ENSMUSG00000037738 ENSMUST00000067722 2 1 2 82 8 23199328 23199346 GAGCACAGATGTAAGGAGG 59 23196046 23199282 AAGAAACCCTCTGGTTCTG 59 NA Mus musculus 50 Asah3l ENSMUSG00000038007 ENSMUST00000084433 3 1 2 140 4 86532938 86532956 TGTCTACTTCCATGCAACG 59 86533060 86557528 TTGTCACACCTGTCATTCC 59 NA Mus musculus 50 Rnf144b ENSMUSG00000038068 ENSMUST00000068891,ENSMUST00000110111 3 2 2 98 13 47335141 47335159 ATTTACATTGAGCGCAACG 59 47335219 47338241 TATGTCATTGTCCAGGTTCTG 59 NA Mus musculus 50 Fkbp14 ENSMUSG00000038074 ENSMUST00000046520,ENSMUST00000114394 3 2 2 95 6 54535864 54535883 CTCCTGGAAATTCGAAATGG 58 54529672 54535809 CACTTTAACCTCATGCTTAGAG 58 NA Mus musculus 50 Crygn ENSMUSG00000038135 ENSMUST00000047119 3 1 1 92 5 24261905 24261924 TGACTACCCTGAATTCTTCC 58 24260075 24260093 TCTATGCGGAAATGCTCTC 59 NA DesignNoJunction Mus musculus 50 Akap2 ENSMUSG00000038729 ENSMUST00000098065,ENSMUST00000107600,ENSMUST00000071723,ENSMUST00000107599,ENSMUST00000098064,ENSMUST00000107598 3 6 14 88 4 57896063 57905749 GATGATAGTAGTGTCCTGGAG 58 57905799 57905817 TGGTTAGCGTAAATCCCTG 59 NA InUTR Mus musculus 50 Ascc3 ENSMUSG00000038774 ENSMUST00000035976,ENSMUST00000035606 3 2 2 83 10 50338006 50338027 GTTGAAGATCTTTGCTGTACTC 59 50338071 50357725 CAATTCAAACAGCTCGTCC 59 NA Mus musculus 50 Agbl3 ENSMUSG00000038836 ENSMUST00000115017,ENSMUST00000115016,ENSMUST00000090350,ENSMUST00000115014 3 4 4 108 6 34732184 34732204 ACTCAGATAGAAGCATCAGTG 59 34733625 34735203 CCAATAGAATCAGCTGCCA 59 NA Mus musculus 50 AA536717 ENSMUSG00000039599 ENSMUST00000090499,ENSMUST00000037698 3 2 5 103 14 21179128 21182492 CACACGGATATGGAAGAGG 59 21182558 21182577 TCTTTCATGCAGTGAAATGG 58 NA Mus musculus 50 Clstn1 ENSMUSG00000039953 ENSMUST00000039144 1 1 3 80 4 149000212 149001325 AGTCACCAAAGAAGGTGAG 59 149001369 149001387 GACTTATCCACTACCACGG 59 NA Mus musculus 50 Clstn1 ENSMUSG00000039953 ENSMUST00000039144 3 1 3 83 4 149000212 149001325 AGTCACCAAAGAAGGTGAG 59 149001371 149001390 GTGGACTTATCCACTACCAC 59 NA Mus musculus 50 NP_001074446.1 ENSMUSG00000039968 ENSMUST00000036489 2 1 1 69 5 20425358 20425376 AGAAACAACGACTATGTCC 57 20414027 20414046 AGCTCTGTAAGTACCATGAG 58 NA DesignNoJunction Mus musculus 50 Fmo1 ENSMUSG00000040181 ENSMUST00000046049 3 1 3 80 1 164780244 164780262 ATCTTTGATGCTGTCATGG 57 164769881 164780201 AGTTAGTATACCTGGGAAGG 57 NA Mus musculus 50 Vprbp ENSMUSG00000040325 ENSMUST00000055009 2 1 2 60 9 106762785 106763312 GATATGAAGCATTCCTTCACAG 59 106763332 106763351 GATCCTGAGAGTGCTTACTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Parc ENSMUSG00000040327 ENSMUST00000066026 1 1 2 96 17 46647869 46647887 GAAGAGGAACCTCTTGAGC 59 46646993 46647809 CTCCAGTACCAGACAAACC 59 NA Mus musculus 50 1110037F02Rik ENSMUSG00000040720 ENSMUST00000059914,ENSMUST00000055372 2 2 3 80 4 11441306 11446084 TCCTCTTTAGGTATCTTCACAG 58 11446125 11446143 GATGGGCACTTGTTATTGG 58 NA Mus musculus 50 Ulk4 ENSMUSG00000040936 ENSMUST00000098284 2 1 4 130 9 120953916 120982982 TCTGAATTTCCTGTATGGAGG 59 120953806 120953824 TCCTCTTGAGGATCCTCAG 59 NA Mus musculus 50 Agrn ENSMUSG00000041936 ENSMUST00000105575,ENSMUST00000105574,ENSMUST00000075787,ENSMUST00000071248 2 4 6 98 4 155548385 155548478 CTAACTCTACCAAGGTCTGTG 59 155548307 155548325 GAATGGAGATGTCCAGACG 59 NA Mus musculus 50 Klhdc8a ENSMUSG00000042115 ENSMUST00000046071 2 1 1 66 1 134199248 134199266 TCCAAGATCTATGTGCTGG 58 134199546 134199564 TATCAAAGACCTCGAAGGC 59 NA DesignNoJunction Mus musculus 50 0610010F05Rik ENSMUSG00000042208 ENSMUST00000043356 2 1 3 88 11 23524989 23525008 AAATCTTCACTTCTGGACAC 57 23522514 23524939 GCTATACTATGTCTTCCTGC 57 NA Mus musculus 50 BC037703 ENSMUSG00000044313 ENSMUST00000061831 2 1 1 62 3 101638927 101638945 GAGACTTAGACCATTGCCT 58 101630761 101630779 TGGTCTGAGAAATCTGCTG 59 NA DesignNoJunction Mus musculus 50 Trp53i13 ENSMUSG00000044328 ENSMUST00000094005,ENSMUST00000060417 2 2 2 63 11 77326174 77326195 TGTTACCAAGAGTGACTTACAC 59 77323206 77323224 TAGAAGAAGGCGATACCCT 59 NA DesignNoJunction Mus musculus 50 Plekha7 ENSMUSG00000045659 ENSMUST00000106605,ENSMUST00000084664 2 2 2 87 7 123288500 123288692 GACATTGATGTCAAGCTGAG 58 123288432 123288450 TATTCTCCTTGAGAGCTCG 58 NA Mus musculus 50 E2f8 ENSMUSG00000046179 ENSMUST00000058745,ENSMUST00000094379 3 2 2 84 7 56127266 56127469 CAAGAGCAACAAAGCTGAG 59 56127200 56127218 CTGCATCTTGCAAATAGCG 59 NA Mus musculus 50 Fcrl5 ENSMUSG00000048031 ENSMUST00000049926 3 1 1 106 3 87261084 87261102 TATAGAACTGCAGCCAGTG 59 87261351 87261720 TTTCAGACTCCTGATCTGC 58 NA Mus musculus 50 Dnajb8 ENSMUSG00000048206 ENSMUST00000061866 3 1 1 75 6 88173054 88173072 AAGCGAATCATTGAGAACG 58 88173111 88173129 CATTGACAGTTACTGACCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gli2 ENSMUSG00000048402 ENSMUST00000062483 1 1 1 80 1 120740977 120740995 GCTGTAACAAAGCCTTCTC 58 120738762 120740935 AGATGTAGGGTTTCTCATTGG 59 NA Mus musculus 50 Ccdc100 ENSMUSG00000048799 ENSMUST00000049811,ENSMUST00000091898 3 2 2 60 18 53842971 53842989 GGACACTCTGATGAGAACG 59 53842929 53842949 GTCGAGTTCACTTATTATGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp644 ENSMUSG00000049606 ENSMUST00000045466,ENSMUST00000112698,ENSMUST00000086790 1 3 6 118 5 107065520 107065538 AAGTATTTCCATCAGGCCC 59 107065327 107065438 TCTGCATTATGAGGGTCTG 58 NA Mus musculus 50 Pdik1l ENSMUSG00000050890 ENSMUST00000061234,ENSMUST00000105877,ENSMUST00000105876 2 3 4 128 4 133840254 133840272 CAGTATCAAGAGCCAACAC 58 133835015 133840163 AATGAAGTCTCTACAAGCTG 57 NA Mus musculus 50 Pcdh15 ENSMUSG00000052613 ENSMUST00000105426,ENSMUST00000092420 1 2 10 134 10 74089463 74089481 ATTCAGTCTGCTATGCCTG 59 74089579 74093259 AAGATTATGCATTGCGCTC 58 NA Mus musculus 50 Grk4 ENSMUSG00000052783 ENSMUST00000001112 2 1 3 81 5 35062533 35072666 GTATACAGAGACCTAAAGCCA 58 35074145 35074165 CCATAGCTAGACCAAGATCTG 59 NA Mus musculus 50 Camk2d ENSMUSG00000053819 ENSMUST00000106404,ENSMUST00000106401 1 2 9 80 3 126474693 126474711 CATTGCATTCAGCAGATCC 59 126474755 126483286 ATTCTCAGGCTTTAGGTCC 58 NA Mus musculus 50 ENSMUSG00000054453 ENSMUSG00000054453 ENSMUST00000067529 1 1 2 81 X 9533505 9533523 AGACGGTGTTGACTTAGTG 59 9533568 9534321 TGCTTGGGAGTTAGTTGAC 59 NA Mus musculus 50 Tmem103 ENSMUSG00000054836 ENSMUST00000068071,ENSMUST00000081750 3 2 2 181 9 110218288 110218307 TACGTTTATTCAGGACACCC 59 110218451 110222086 CTACCACGTTTCCCTTCAG 59 NA Mus musculus 50 Eef1d ENSMUSG00000055762 ENSMUST00000109972,ENSMUST00000089681,ENSMUST00000089680,ENSMUST00000073802,ENSMUST00000023235,ENSMUST00000109976,ENSMUST00000116440,ENSMUST00000109975 3 8 9 130 15 75726770 75726788 AAGAAGATAAGGAGGCTGC 59 75726342 75726676 AGTCTCATCATCCCAAGGT 59 NA DesignRelaxed Mus musculus 50 Rgs3 ENSMUSG00000059810 ENSMUST00000065870,ENSMUST00000098031,ENSMUST00000107424,ENSMUST00000084521,ENSMUST00000107428,ENSMUST00000107430 2 6 10 116 4 62287552 62292162 TACAATCCCTGAAGAACCG 58 62292242 62292260 TCTTGGTAGTTACTGTGGC 58 NA Mus musculus 50 C730036D15Rik ENSMUSG00000060317 ENSMUST00000081541,ENSMUST00000107698 3 2 2 96 4 49394610 49394628 AAGAAGCTGCTAACTTCCT 58 49393518 49393536 ATAGCTAGCCCAATCTCTG 58 NA DesignNoJunction Mus musculus 50 Phactr2 ENSMUSG00000062866 ENSMUST00000105547,ENSMUST00000105543,ENSMUST00000079698 2 3 7 82 10 12981622 12981640 CTGAAGAAGGGAGTGACTC 58 12975126 12981576 AGTGGTTGTAGTCACTGTC 58 NA Mus musculus 50 Med14 ENSMUSG00000064127 ENSMUST00000096495,ENSMUST00000115481 2 2 4 80 X 12283469 12283487 ATGACTGGAGTAGCATTGC 59 12282288 12283427 TCAGATGAGCAGGTATTTCTG 59 NA Mus musculus 50 1110033M05Rik ENSMUSG00000064138 ENSMUST00000091459 3 1 3 101 13 77973954 78041925 GCTATGGATGAAGGGTATGG 59 78041987 78042007 ACCATCAGAAGATGATGACTG 59 NA Mus musculus 50 D12Ertd647e ENSMUSG00000064215 ENSMUST00000085065,ENSMUST00000079294,ENSMUST00000066701,ENSMUST00000076702 1 4 5 90 12 104673712 104673730 AGATGACATCTTCAGCAGC 59 104674773 104674791 TGTGTTAACAGGATGAGCC 59 NA DesignNoJunction Mus musculus 50 Serpinb5 ENSMUSG00000067006 ENSMUST00000086701,ENSMUST00000112730,ENSMUST00000112729 3 3 3 81 1 108776849 108776870 CAGAATAAGCATCTGAGTATGC 59 108776912 108778187 GCTGTTCAATCTTCTCCAG 58 NA Mus musculus 50 EG381818 ENSMUSG00000067541 ENSMUST00000087849,ENSMUST00000091791 3 2 2 102 6 132389787 132390661 TCTCAGCTCCTAGAGATGG 59 132389703 132389721 TTTCATCAGAACTGGGAGG 58 NA Nonspecific Mus musculus 50 Lrch1 ENSMUSG00000068015 ENSMUST00000088968 1 1 2 117 14 75195861 75195879 TACAGAGTAATGGAAGCCA 57 75186188 75195113 CTTAGAAACACTGAACGAGG 58 NA Mus musculus 50 Sars ENSMUSG00000068739 ENSMUST00000102625,ENSMUST00000090553 1 2 4 80 3 108236076 108236983 CCATTAGTAATGATGAGGACG 57 108236016 108236035 CATGGGAATACTTCTTCCTG 57 NA Mus musculus 50 Sfrs3 ENSMUSG00000071172 ENSMUST00000114717 2 1 2 105 17 29175480 29175498 AAAGAGAAGTCGGAATCGT 58 29175567 29176414 AGACATGATGGTGACTCTG 58 NA Mus musculus 50 Cecr2 ENSMUSG00000071226 ENSMUST00000100993 3 1 3 92 6 120706943 120707590 TTTAAACCAGATGAGGCCAG 59 120707645 120707663 TCTGGGATTCTAGAGGAGC 59 NA Mus musculus 50 1700086L19Rik ENSMUSG00000071265 ENSMUST00000095617 3 1 1 61 12 75396387 75396408 GAAGATCTACATCAAGATTCCC 58 75396542 75396562 CTGTCTTCCGGTAATATCAGG 59 NA DesignNoJunction Mus musculus 50 Ganab ENSMUSG00000071650 ENSMUST00000096246,ENSMUST00000096247 1 2 2 80 19 8989689 8989709 CTTTAACTATCAGACTCGCCA 59 8989751 8989902 TCTGCTGAACTAGAGACCA 59 NA Mus musculus 50 EG544974 ENSMUSG00000072100 ENSMUST00000096852 1 1 1 60 X 151321652 151321671 TTTAGACATAGGCAAGATGC 57 151321611 151321631 TTCAAGGCTATGTAAGGTAGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Amy1 ENSMUSG00000074264 ENSMUST00000067980,ENSMUST00000106540 1 2 2 80 3 113261129 113261251 GCGTCAAATAAGGAACATGG 59 113261068 113261086 TTGCTGTCATTATCCCACC 59 NA Mus musculus 50 Mgst2 ENSMUSG00000074604 ENSMUST00000099106 1 1 1 74 3 51481518 51481536 ATCGTAATGCTGTGGATGG 59 51485733 51485753 GTATATGTACAGGAGACCCAG 58 NA DesignNoJunction Mus musculus 50 Gm1006 ENSMUSG00000074665 ENSMUST00000109757,ENSMUST00000109759,ENSMUST00000099181 3 3 3 84 2 153785441 153787262 CAATGAATGCTATACTGGGT 57 153787309 153787327 TCCAACACATCAATGTCTG 57 NA Mus musculus 50 Prdm11 ENSMUSG00000075028 ENSMUST00000111274,ENSMUST00000099700,ENSMUST00000111272,ENSMUST00000111273 1 4 4 83 2 92853525 92853544 AAGTTGAACCCAAGAAACTG 58 92853038 92853479 ACTCACAGAACCAGAAGTC 58 NA Mus musculus 50 Olfr1006 ENSMUSG00000075211 ENSMUST00000099919,ENSMUST00000099917 1 2 2 60 2 85515028 85515046 AGAAGACAAACGCATTTCC 58 85514986 85515006 TACAACACAGGAGAAGAACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fnbp1 ENSMUSG00000075415 ENSMUST00000113564,ENSMUST00000113562,ENSMUST00000113561,ENSMUST00000073879,ENSMUST00000113560,ENSMUST00000100208,ENSMUST00000075326,ENSMUST00000100207,ENSMUST00000113555 3 9 12 80 2 30892107 30892126 CAGAGTGGACTGTATGATGG 59 30891759 30892064 GTAACTACCATCTGGGCTC 59 NA Nonspecific Mus musculus 50 TRAV8D-2 ENSMUSG00000076821 ENSMUST00000103632 3 1 1 63 14 53965905 53965923 ACACAACTGTTGTTCAGTG 58 53965949 53965968 ATTAAGATTAGCTGGGCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mup1 ENSMUSG00000078673 ENSMUST00000107477 3 1 2 238 4 61441156 61441804 ATTCTGTGACGTATGATGGA 58 61440596 61440614 GAATCCTGACTTACTGGCA 58 NA DesignRelaxed Mus musculus 50 Eif5a ENSMUSG00000078812 ENSMUST00000071026,ENSMUST00000070996,ENSMUST00000043419,ENSMUST00000108612,ENSMUST00000108611,ENSMUST00000108610,ENSMUST00000108613,ENSMUST00000108609,ENSMUST00000108608,ENSMUST00000108607 1 10 10 161 11 69731420 69731438 TCAAACGGAATGACTTCCA 59 69730994 69731107 GCACTGTGATCAGGATCTC 59 NA Mus musculus 50 Mef2b ENSMUSG00000079033 ENSMUST00000072500,ENSMUST00000110143,ENSMUST00000110146,ENSMUST00000110141,ENSMUST00000110140 1 5 5 179 8 72688980 72688999 AAGAAGGCTTATGAGCTGAG 59 72689138 72689437 CTTCAGTGTCTGAAGGATATCC 59 NA Mus musculus 50 Mef2b ENSMUSG00000079033 ENSMUST00000072500,ENSMUST00000110143,ENSMUST00000110146,ENSMUST00000110141,ENSMUST00000110140 3 5 5 181 8 72688981 72688999 AGAAGGCTTATGAGCTGAG 58 72689144 72689440 CCTCTTCAGTGTCTGAAGG 59 NA Mus musculus 50 Utp14b ENSMUSG00000079470 ENSMUST00000053760 1 1 1 140 1 78659800 78659818 GCATATCACCAACTTTGGG 58 78660967 78660985 ATCTGGTCTCATCTTTGGC 59 NA DesignNoJunction, InUTR Mus musculus 50 Pcdha6 ENSMUSG00000079714 ENSMUST00000063763 1 1 1 165 18 37129768 37129786 TTGAACGACGATCATTGCT 59 37318983 37319001 TTGCACTGGATACTGTTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Tmem158 ENSMUSG00000054871 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Clec2f ENSMUSG00000000248 ENSMUST00000000254 2 1 2 99 6 128931979 128932975 AACAACATGATTCCCATCCA 59 128933036 128933055 TACAGATCCATATCCGAGGT 59 NA Mus musculus 50 Mcts1 ENSMUSG00000000355 ENSMUST00000000365,ENSMUST00000115115 3 2 2 89 X 35964993 35966401 GATGTCTGCAGAAGATATTGAG 58 35966451 35966469 GTCTTCATATGCCACAGAC 57 NA Mus musculus 50 Myo18a ENSMUSG00000000631 ENSMUST00000108375,ENSMUST00000102488,ENSMUST00000108376,ENSMUST00000000645,ENSMUST00000092887,ENSMUST00000092886,ENSMUST00000100794,ENSMUST00000092884 2 8 10 119 11 77655085 77655430 AACAAAGACGAGGAGATCC 58 77655652 77655670 CTCCGATGTCAGTTCTGAG 59 NA Mus musculus 50 Sez6 ENSMUSG00000000632 ENSMUST00000000646,ENSMUST00000093995 2 2 2 80 11 77788778 77788797 ATCCAGTATTCTCATGTGCC 59 77788840 77789989 TCATGGCAAGATGTCACTC 59 NA Mus musculus 50 Icam2 ENSMUSG00000001029 ENSMUST00000106809 2 1 4 61 11 106243748 106243769 TCTTCTTATCCTGTTCTACAGC 59 106242703 106242721 CGTTCATGAAGCAATGGAG 59 NA DesignNoJunction Mus musculus 50 Eef1e1 ENSMUSG00000001707 ENSMUST00000001757 1 1 1 80 13 38747958 38747976 GGTTAGAGTTCAGGGTCAC 59 38746948 38747917 AGGAATTAAGATCCTTCAGCAG 59 NA Mus musculus 50 Sfpi1 ENSMUSG00000002111 ENSMUST00000002180 3 1 1 81 2 90939612 90939632 ATTCAGAGCTATACCAACGTC 59 90939675 90953421 CAGTAGTGATCGCTATGGC 59 NA Mus musculus 50 Puf60 ENSMUSG00000002524 ENSMUST00000100527,ENSMUST00000002599 1 2 2 90 15 75902374 75902671 AACATCAAGGTGGGAAGAC 59 75902302 75902320 ATATTCGGTTGAAAGCCCT 58 NA Mus musculus 50 Mpnd ENSMUSG00000003199 ENSMUST00000003267,ENSMUST00000097305 3 2 2 90 17 56151308 56151327 GAAGTAACATCCTTTGCTGC 59 56151380 56151706 GACAGTGGAAGTCCAAGAG 59 NA Mus musculus 50 NP_001074450.1 ENSMUSG00000003360 ENSMUST00000003450 3 1 1 80 15 98482395 98482413 GAAGATGCTCGAAGAGGAG 59 98482014 98482352 CTTTCCTGAGGATCTTCCAG 59 NA Mus musculus 50 Klc4 ENSMUSG00000003546 ENSMUST00000003641,ENSMUST00000003642 1 2 2 157 17 46776964 46776982 CTGGTCATCCAGTATGCAG 59 46776417 46776843 TACTTATTCTGGTCCCGGT 59 NA Mus musculus 50 Tbccd1 ENSMUSG00000004462 ENSMUST00000004576 3 1 1 81 16 22822826 22822845 CTCTAGTAGGAGCACATGTC 58 22822641 22822783 ATTGTCATGGATCGTAAGGG 59 NA Mus musculus 50 Zfp592 ENSMUSG00000005621 ENSMUST00000005761,ENSMUST00000107353 3 2 2 80 7 88182345 88182363 AAGACTGCCAGTAGTACGA 59 88182404 88182703 CTTATAAATTAGCTGGGAGGGT 59 NA Mus musculus 50 Tomm40l ENSMUSG00000005674 ENSMUST00000111327,ENSMUST00000005817 3 2 2 80 1 173150545 173150686 GGGAATCAGTGATCATGGT 59 173150483 173150502 GGTGATAAACTAGCTCTCCT 58 NA Nonspecific Mus musculus 50 Rfx5 ENSMUSG00000005774 ENSMUST00000107260,ENSMUST00000107254,ENSMUST00000107253,ENSMUST00000107255,ENSMUST00000090837,ENSMUST00000029772 2 6 6 83 3 94760520 94760654 CCAGTCCAAATATTGCTACAG 58 94760699 94760717 GATCCCTTCAAGTCGAGTC 59 NA Mus musculus 50 Ctns ENSMUSG00000005949 ENSMUST00000006103,ENSMUST00000108476 2 2 2 80 11 72999832 72999850 TTCCTCTTCTGCTTCTCCT 59 72998837 72999793 GTAGTAGAAGTTCATATAGGCCTG 59 NA Mus musculus 50 Rcn1 ENSMUSG00000005973 ENSMUST00000006128 1 1 1 161 2 105232181 105233757 ATTGTAGTCCTGGAAACCC 58 105229245 105229263 GTTCAGATCTCGGAAGTCG 59 NA Mus musculus 50 Gtpbp3 ENSMUSG00000007610 ENSMUST00000007754,ENSMUST00000095259 1 2 2 60 8 74015050 74015068 AAATGTTGTGGTCACTGGA 59 74015091 74015325 GCTGAGTAGATTCACCAGAC 59 NA DesignNoJunction Mus musculus 50 Homer1 ENSMUSG00000007617 ENSMUST00000080127,ENSMUST00000109498,ENSMUST00000109490 2 3 10 205 13 94156324 94157485 CTCTCATGCTAGTTCAGCA 59 94161662 94161682 CGTTTGCTTGACTACTAACAC 59 NA DesignRelaxed Mus musculus 50 Rps15a ENSMUSG00000008683 ENSMUST00000106588,ENSMUST00000106590 1 2 2 80 7 125253497 125253518 CCCTAGATTTGATGTTCAACTC 58 125252699 125253456 ACAATGAAGCCAAACTGAC 58 NA Nonspecific Mus musculus 50 Pttg1ip ENSMUSG00000009291 ENSMUST00000009435 2 1 1 99 10 77050038 77052386 GGAATGTCTCCTGTCTGTG 59 77052448 77052467 GCGGAACTCAATTTACAGAG 58 NA Mus musculus 50 Sdhb ENSMUSG00000009863 ENSMUST00000010007 2 1 1 81 4 140522531 140527057 TGGATCTGAATAAGTGCGG 59 140527099 140527120 CGGAAGGTTAAAGTAGAATCCA 59 NA Mus musculus 50 Asz1 ENSMUSG00000010796 ENSMUST00000010940 3 1 1 80 6 18001392 18004535 TTCAGAAGATGCAGAATGAG 57 18001331 18001350 TTCGAGTCTTCCATGTAGAG 58 NA Mus musculus 50 Mogat1 ENSMUSG00000012187 ENSMUST00000113524,ENSMUST00000012331 2 2 2 90 1 78525814 78534523 GATCTACACTGTTGTTGGC 58 78534577 78534595 TAGGTATGTCTGATGCAGC 58 NA Mus musculus 50 1810065E05Rik ENSMUSG00000013653 ENSMUST00000013797 1 1 1 80 11 58236319 58236340 CCAACGGACATTTAGATATGAC 58 58236381 58237329 GGTACCTGAGATGGTTTCG 59 NA Mus musculus 50 Tex261 ENSMUSG00000014748 ENSMUST00000014892 2 1 1 101 6 83723848 83725020 ATGATCTGGTTCTCCACAG 58 83723765 83723783 AAAGTAGACGAGGTTGGTG 59 NA Mus musculus 50 Cd48 ENSMUSG00000015355 ENSMUST00000068584 3 1 2 81 1 173626083 173629519 CCCTGGAAGTATTTGATCCT 58 173629563 173629581 CTCAGGTGACAGGAATCAG 59 NA Mus musculus 50 Adss ENSMUSG00000015961 ENSMUST00000016105 1 1 1 82 1 179715079 179715100 CGTAGATTCTGTGGAATATGAC 58 179714240 179715036 CTCCATTTCCGATAAAGGC 58 NA Mus musculus 50 Lbp ENSMUSG00000016024 ENSMUST00000016168,ENSMUST00000109491 3 2 2 85 2 158134455 158134473 TACAAGATCACACTACCGG 58 158134521 158135345 ATCTCCAGGCTATGAAACTC 58 NA Mus musculus 50 Ppy ENSMUSG00000017316 ENSMUST00000017460 3 1 1 178 11 101961982 101962000 CCCTGTTTCTCGTATCCAC 59 101961585 101961840 TCTCTTCCCATACCTAGGC 59 NA Mus musculus 50 Crk ENSMUSG00000017776 ENSMUST00000108426 1 1 4 86 11 75493102 75493120 CTACATCATCAACAGCAGC 58 75516871 75516889 TAACCTTTACCAGCTCACC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rai12 ENSMUSG00000018565 ENSMUST00000108595,ENSMUST00000108594,ENSMUST00000018709 1 3 3 81 11 69788585 69788604 ACATTCCCTGTGTTACACTC 59 69784226 69788544 TCTACTAGGGAGTTATCACCTG 59 NA Mus musculus 50 Noxo1 ENSMUSG00000019320 ENSMUST00000019464 3 1 1 152 17 24835297 24835315 CCAAGACACCCAGTATCAG 59 24835538 24835745 TTTCTTAAGGGTCTTCTGGAG 59 NA Mus musculus 50 1200011M11Rik ENSMUSG00000020495 ENSMUST00000020801 1 1 1 106 11 86891651 86893684 TAATACTGATGCCTCAGGT 57 86891563 86891581 AAATCTCAAGACCCAAAGG 57 NA DesignNoJunction Mus musculus 50 Rasl10b ENSMUSG00000020684 ENSMUST00000021022,ENSMUST00000108140 2 2 2 203 11 83226194 83226212 TATACAACGAGTTCAGCGA 58 83231396 83231414 CATAGACCAGGATGTAGGC 58 NA DesignNoJunction, InUTR Mus musculus 50 Efcab3 ENSMUSG00000020690 ENSMUST00000021029 1 1 1 88 11 104973152 104973170 ATCTTAGCCATTGACCACC 59 104973221 104978395 GTGGCTTTCTTTACATGCTG 59 NA Mus musculus 50 Ube2o ENSMUSG00000020802 ENSMUST00000082152 1 1 1 80 11 116401439 116402409 GACAGAATGGACCTCTTCTC 59 116401378 116401398 GATGTCAAATAGGTAGAGGCC 59 NA Mus musculus 50 Klhl28 ENSMUSG00000020948 ENSMUST00000021331 1 1 1 80 12 66052801 66057838 CCTGTTTGGATAGTGTGGA 58 66052739 66052760 CATAGCGAGGAATATTTAAGGG 58 NA Mus musculus 50 Akr1c13 ENSMUSG00000021213 ENSMUST00000021634 3 1 1 162 13 4193438 4193931 CACTACAAAGCTTTGGTGC 59 4195696 4195714 CCCTTGCTCATTTACTGGA 59 NA Mus musculus 50 4930573I19Rik ENSMUSG00000021275 ENSMUST00000021703 1 1 1 80 12 112169871 112169889 CTGAAGACTTTGACCAGGA 58 112169932 112170835 TTCCACCTTCTGTCTTTCTC 59 NA Mus musculus 50 Pcbd2 ENSMUSG00000021496 ENSMUST00000021958 1 1 1 84 13 55834418 55876735 ATTTCAATCAGGCGTTTGG 59 55876783 55876801 TAGACGTTGAACCATTCCG 59 NA Mus musculus 50 Hexb ENSMUSG00000021665 ENSMUST00000022169 1 1 1 80 13 97959296 97961175 GTTACGAGGTTTAGAGACGT 59 97959002 97959023 GCTATACTGGATTCATTGATGG 58 NA Mus musculus 50 Myst4 ENSMUSG00000021767 ENSMUST00000069648 2 1 3 80 14 22450623 22450641 TGTGGATGGTTTCATCCTC 59 22450683 22453715 ACTCATATTCCCATCAACCTC 59 NA Mus musculus 50 Slmap ENSMUSG00000021870 ENSMUST00000102956,ENSMUST00000112331,ENSMUST00000100800,ENSMUST00000038522,ENSMUST00000100798,ENSMUST00000090359,ENSMUST00000112330 2 7 7 80 14 27289878 27293395 CTTCGTTCAGATGTCATCCA 59 27287999 27288020 CTGAGAGTACATACTTGGAGTG 59 NA Mus musculus 50 Pdzd2 ENSMUSG00000022197 ENSMUST00000075317,ENSMUST00000096893 2 2 3 103 15 12337127 12340773 GGACATCACAGGAATACCA 58 12337042 12337060 GATGGAAATAACGGATGGC 58 NA Mus musculus 50 Q8VHV1-3 ENSMUSG00000022296 ENSMUST00000022905 1 1 1 195 15 38764858 38765464 TACAAATCAGGTGTGCTGG 59 38780664 38780682 GCTTAGCATCCCTCTTAGC 59 NA DesignNoJunction Mus musculus 50 Sla ENSMUSG00000022372 ENSMUST00000100572 1 1 1 81 15 66615313 66618614 GTGACTCATTATTCTGAAGTGG 58 66615253 66615271 TTGGAGCAGGTATGTTCTG 59 NA Mus musculus 50 Arc ENSMUSG00000022602 ENSMUST00000023268,ENSMUST00000110009 3 2 2 133 15 74500419 74500623 GAGAATGACACCAGGTCTC 59 74500304 74500322 TGAAAGTGTCTTGGAACCC 59 NA InUTR Mus musculus 50 Cpox ENSMUSG00000022742 ENSMUST00000060077 2 1 1 80 16 58678095 58678114 AAGTTTGGCCTCTTTACTCC 59 58678157 58678795 CATGTACTCCCATCTTGCT 59 NA Mus musculus 50 Reg2 ENSMUSG00000023140 ENSMUST00000023906 3 1 1 96 6 78357643 78357661 CAGTGGCTCCCTATTTCTC 59 78357719 78357929 GTATGCTGTGTTTGAAGTCAG 59 NA DesignNoJunction Mus musculus 50 Psg29 ENSMUSG00000023159 ENSMUST00000075934 3 1 1 93 7 17794182 17795691 AACTCCAAGTTAACAACCC 57 17795748 17795766 CCTTCAGCAACATATCGAG 57 NA Mus musculus 50 Wdr51a ENSMUSG00000023345 ENSMUST00000072206,ENSMUST00000024116 1 2 3 119 9 106232244 106232262 GTCTGGAGTCAGTTCAAGG 59 106232345 106252028 CCAGAATGGACACTGTCTG 59 NA Mus musculus 50 Polr2d ENSMUSG00000024258 ENSMUST00000025106 3 1 1 68 18 31955020 31955704 CAAAGCTCTGATTCCAAGC 59 31955736 31955754 ATGTCATCGAGAATCTGCT 58 NA DesignNoJunction Mus musculus 50 Isoc1 ENSMUSG00000024601 ENSMUST00000025503 1 1 1 108 18 58831293 58832909 GTTTGGAGTAGAAACGCAC 59 58832981 58832999 CATCATGCTTCTCGAGGAG 59 NA Mus musculus 50 Rab3il1 ENSMUSG00000024663 ENSMUST00000113161,ENSMUST00000025565 1 2 2 84 19 10104961 10106850 AACAACACCAACACATGTG 59 10106898 10106916 AATAGTGGCTGTCAGAGTC 58 NA Mus musculus 50 Ms4a1 ENSMUSG00000024673 ENSMUST00000025576 3 1 1 95 19 11326361 11327676 CCAAATCTAATGTGGTTCTGC 59 11326286 11326305 GGGAAGATACTCCACTTAGC 59 NA Mus musculus 50 Cdca5 ENSMUSG00000024791 ENSMUST00000025704,ENSMUST00000113538 2 2 2 81 19 6090516 6090659 GAAATCCTGAAATCAGAGCTG 59 6090702 6090720 TCAGAAGCTCAAACTGCTC 59 NA Mus musculus 50 Adrbk1 ENSMUSG00000024858 ENSMUST00000088737,ENSMUST00000113837,ENSMUST00000025791 2 3 3 80 19 4292413 4292432 TTTCAAAGAATGCTACGGAG 58 4292222 4292370 CAATGTATGGCTGGAAGAG 57 NA Mus musculus 50 Arl2 ENSMUSG00000024944 ENSMUST00000025893 2 1 1 87 19 6137783 6137801 GTTCAATGGAGAAGACGTG 58 6137625 6137732 GATGTTCAGCTTGAATCCG 58 NA Mus musculus 50 Cyp26a1 ENSMUSG00000024987 ENSMUST00000025946 2 1 1 80 19 37775250 37775508 TTGAGCTGAATGGATACCAG 59 37775551 37775569 AGATATCTGCCACATCGTG 59 NA Mus musculus 50 Efhc2 ENSMUSG00000025038 ENSMUST00000026014 3 1 1 80 X 16820599 16820619 TTCTACCTTGAAGATGACACC 59 16807837 16820558 CCTGATAGAAGTGCCTTGAG 59 NA Mus musculus 50 Abhd6 ENSMUSG00000025277 ENSMUST00000026313 3 1 1 80 14 8860894 8872271 TCTATTATTGGTACTGGCGG 58 8872311 8872332 AGGAGTAACAGAACTGATAGTC 58 NA Mus musculus 50 Iscu ENSMUSG00000025825 ENSMUST00000026937 1 1 1 141 5 114222942 114224278 TACCACAAGAAGGTTGTGG 59 114224383 114225242 TTTCATCCACCTGGATCTG 58 NA Nonspecific Mus musculus 50 Acadl ENSMUSG00000026003 ENSMUST00000027153 3 1 1 80 1 66889699 66889718 AGCTAATGCCTTACTTGGAG 59 66888293 66889657 GCAATTAAGAGCCTTTCCTG 59 NA Mus musculus 50 Spata3 ENSMUSG00000026226 ENSMUST00000113346,ENSMUST00000113344,ENSMUST00000052854 3 3 3 86 1 87920992 87921011 ATAGCCGAATCTTTGATGTC 57 87921059 87922990 TTCTGTAGAAGGTGAGAAGG 58 NA DesignNoJunction Mus musculus 50 2310005N03Rik ENSMUSG00000026500 ENSMUST00000027781 1 1 1 80 1 180251924 180251945 CGAGAATCTATACTCTATGGCT 58 180251983 180252086 TCTTCTAATTCTACTGGTCACC 58 NA Mus musculus 50 Spopl ENSMUSG00000026771 ENSMUST00000028110,ENSMUST00000114501 1 2 2 87 2 23392981 23392999 CATAAGTCTGTGCTTGCAG 58 23373459 23392854 TTTCCACTCGATTCTTTGTG 58 NA Mus musculus 50 Ralgds ENSMUSG00000026821 ENSMUST00000113894,ENSMUST00000028170,ENSMUST00000113893,ENSMUST00000100241,ENSMUST00000113892 2 5 5 80 2 28403130 28403641 ACTATCTCTATGGGAGACTG 57 28403922 28403940 ACTGTAGCAACTTGATCTG 57 NA Mus musculus 50 Inpp5e ENSMUSG00000026925 ENSMUST00000116559,ENSMUST00000028291,ENSMUST00000114090 3 3 3 81 2 26254800 26254819 CTACAAGTTTGACATTGGGA 57 26254198 26254756 GTATAGGACTCGGTCTGTG 58 NA Mus musculus 50 Zc3h15 ENSMUSG00000027091 ENSMUST00000081591 1 1 1 93 2 83501607 83501625 ATTTGAATTTCGTCCCGAG 58 83501682 83502314 ATCATCAACCTCATCACCA 58 NA Mus musculus 50 Mcm8 ENSMUSG00000027353 ENSMUST00000028831,ENSMUST00000066559 2 2 2 80 2 132649096 132650465 CCCTTCCTACAAAGTGTCC 59 132650508 132650527 GTGTAACTGTGAGAGGAGAG 59 NA Mus musculus 50 Slc20a1 ENSMUSG00000027397 ENSMUST00000028880,ENSMUST00000063202,ENSMUST00000110313 2 3 4 80 2 129025792 129025929 CTATGTTTGGTTCTGCTGTG 59 129025972 129025990 CACCGACAATACAATGGGT 59 NA Mus musculus 50 8030411F24Rik ENSMUSG00000027444 ENSMUST00000028933 2 1 1 88 2 148609169 148609187 TTGCTACAAGGCTCAAGAG 59 148611525 148611544 CTAGTCAGGATGGTGAAGTG 59 NA DesignNoJunction Mus musculus 50 Fxr1h ENSMUSG00000027680 ENSMUST00000001620,ENSMUST00000108198,ENSMUST00000108197,ENSMUST00000091244 1 4 4 80 3 33953243 33955259 CTAGAGAAGACGGAATGGT 58 33955300 33955321 GATACTCTAGAAGAACTTGCAC 58 NA Mus musculus 50 Il2 ENSMUSG00000027720 ENSMUST00000029275 3 1 1 189 3 37024735 37024753 TCCACTTCAAGCTCTACAG 58 37022043 37024483 CTTTCAATTCTGTGGCCTG 59 NA Mus musculus 50 Pfn2 ENSMUSG00000027805 ENSMUST00000066882 3 1 1 107 3 57649169 57649188 TATACGTTGATGGTGACTGC 59 57647222 57649101 TTACAAAGACCAAGACTCTCC 59 NA Mus musculus 50 Lce1b ENSMUSG00000027923 ENSMUST00000029531 3 1 1 60 3 92459689 92459707 CTGTGGAGAAGTGCTACTG 59 92459647 92459667 CAAGAGTCCAGAATACAAAGC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Aqp3 ENSMUSG00000028435 ENSMUST00000055327 1 1 1 84 4 41041407 41041742 TGTACTACGATGCAATCTGG 59 41041342 41041360 TAGGTGGCAAAGATTCCAG 59 NA Mus musculus 50 Reck ENSMUSG00000028476 ENSMUST00000030198 1 1 1 81 4 43931350 43935687 CAAACTTTAACAACAGGCCA 59 43935731 43935749 AGCTTCATGTCACTCATGG 59 NA Mus musculus 50 5830433M19Rik ENSMUSG00000028578 ENSMUST00000030313 1 1 1 80 4 94215854 94215875 TTTGGACTCTGATATGGAAGAG 59 94187812 94215813 ACACAGGTATCTTGCTGAC 59 NA Mus musculus 50 Ptpru ENSMUSG00000028909 ENSMUST00000105987,ENSMUST00000030741,ENSMUST00000105985,ENSMUST00000097860,ENSMUST00000105984 3 5 6 80 4 131359342 131359362 CTGGAGGACATGATCTTTCTC 59 131359048 131359302 TTGGTAGCTGATCTCATACTG 59 NA Mus musculus 50 Mrpl33 ENSMUSG00000029142 ENSMUST00000031024 2 1 1 63 5 31918799 31918817 CTTCAACCACAAGAGAAGC 58 31918843 31924751 CACTATTGGATCATAGTGCA 57 NA DesignNoJunction Mus musculus 50 Snx17 ENSMUSG00000029146 ENSMUST00000031029 2 1 1 81 5 31498624 31498860 GTGCTCAGAAAGAGTTATTGG 58 31498903 31498921 GAGCATAAAGCAGGTTCAG 58 NA Mus musculus 50 Yipf7 ENSMUSG00000029158 ENSMUST00000031045 2 1 1 100 5 69912402 69918446 TTTGCTAGAGGAACTTGGA 58 69912320 69912338 TTTCATTCATGATGCTGCC 58 NA Mus musculus 50 Ep400 ENSMUSG00000029505 ENSMUST00000086645,ENSMUST00000041558,ENSMUST00000112436,ENSMUST00000112435 2 4 4 80 5 111132517 111132535 GAGGAAGTCTTTGCTTCAC 58 111130794 111132473 CACAGGCTGAAATAACCTG 58 NA Mus musculus 50 Tmem106b ENSMUSG00000029571 ENSMUST00000031556 1 1 2 80 6 13033409 13034195 GTACTCATGATGCAAGTTACTG 59 13034235 13034254 GACATACTGGTACCTTTCCT 58 NA Mus musculus 50 Fscn3 ENSMUSG00000029707 ENSMUST00000031719 1 1 1 80 6 28380662 28381520 CAGTCATCTATGATGCTGAG 57 28381563 28381581 CACTGTCACATTCGTACTG 58 NA Mus musculus 50 1700074P13Rik ENSMUSG00000029883 ENSMUST00000031935 1 1 1 88 6 40876029 40876047 TAGCTATGGAACCAATGGC 59 40871835 40875978 GATGTCAGGATCACTAAGGT 58 NA Mus musculus 50 Cntn3 ENSMUSG00000030075 ENSMUST00000032159 1 1 1 80 6 102192030 102192048 GGTATTTCAATGGAGCCCT 59 102159335 102191986 AATCACCAGATGAACTCCC 58 NA Mus musculus 50 Bms1 ENSMUSG00000030138 ENSMUST00000032237 3 1 1 81 6 118346189 118346210 GAGTATGATGAAGGAGAAAGCA 59 118342994 118346147 ATTCAGCCTGGTTAAGCTG 59 NA Mus musculus 50 Dmpk ENSMUSG00000030409 ENSMUST00000032568,ENSMUST00000108475,ENSMUST00000108473,ENSMUST00000108472,ENSMUST00000108471,ENSMUST00000108474 3 6 6 84 7 19672975 19672994 GAGATGTTCTATGGGCAGAC 59 19673041 19673359 ACAAGTGTTCCCTGTAGTG 59 NA Mus musculus 50 Trpm1 ENSMUSG00000030523 ENSMUST00000107525,ENSMUST00000085222,ENSMUST00000098399,ENSMUST00000107527,ENSMUST00000098398,ENSMUST00000107516,ENSMUST00000107519,ENSMUST00000032737 3 8 10 101 7 71344235 71346782 TAAAGCCATGTACATCCGAG 59 71346845 71346864 GATATCAAGAGCTTCGGGAG 59 NA Mus musculus 50 Cd37 ENSMUSG00000030798 ENSMUST00000033063 2 1 3 60 7 52493932 52494038 TTCTTCTTTGTACTAGGCGG 59 52493891 52493910 TCTTGTCAATGAGGATCCAG 59 NA DesignRelaxed Mus musculus 50 Trim30 ENSMUSG00000030921 ENSMUST00000076922 1 1 1 80 7 111560754 111560772 ATTCCAAGCTCCAGATCTG 59 111560174 111560443 GTCATATGAACCCAGTATTGC 58 NA Mus musculus 50 Brf2 ENSMUSG00000031487 ENSMUST00000033877 1 1 1 86 8 28236347 28236365 CAGATGGTAAAGCTCCTGG 59 28235080 28236297 GAACAGTTTGAAGCTGCTG 59 NA Mus musculus 50 Frg1 ENSMUSG00000031590 ENSMUST00000033999 2 1 1 80 8 42496625 42496646 ATGGATAAAGGAGCCTATATCC 58 42495665 42496584 GCCTTCATCAACTTCTCTG 58 NA Mus musculus 50 Pcm1 ENSMUSG00000031592 ENSMUST00000045199,ENSMUST00000045218 1 2 2 80 8 42416013 42416031 AAAGTCGGATGAAGAAGAC 57 42416075 42416173 TTCCTTAGCTCTTCCTCTG 57 NA Mus musculus 50 BC004022 ENSMUSG00000031652 ENSMUST00000098530 2 1 3 257 8 89384438 89384456 CGATTCCTCAGTTACAGGG 59 89368815 89368833 CTTGAAGAGGTCTGGATCC 59 NA DesignNoJunction Mus musculus 50 Zfp330 ENSMUSG00000031711 ENSMUST00000034147,ENSMUST00000086864 3 2 2 83 8 85288387 85288768 ATCTTAGCATGTCAACACG 57 85288322 85288341 AGTAAGCATCATACCCTGAG 58 NA Mus musculus 50 Terf2 ENSMUSG00000031921 ENSMUST00000068388,ENSMUST00000116425,ENSMUST00000095178 3 3 3 99 8 109618791 109618809 AGCTATCAATGTGCTGGAG 59 109606958 109618728 AATAATGACAGCAGCCTCC 59 NA Nonspecific Mus musculus 50 Snx19 ENSMUSG00000031993 ENSMUST00000034475 1 1 1 80 9 30241004 30241128 TCATTCCTGAAGCAACTCTG 59 30241171 30241189 ATCTGTGTTCAGAGCAAGG 59 NA Mus musculus 50 Rexo2 ENSMUSG00000032026 ENSMUST00000034524 3 1 2 181 9 48287485 48288516 TGGAGATGACAGGATTGGA 59 48282604 48283229 CTTGGTAAGACCAGACTTCC 59 NA Mus musculus 50 Mpi ENSMUSG00000032306 ENSMUST00000034856 2 1 1 90 9 57396394 57396412 TTTCCCACCTGATGAAGAG 58 57394362 57396341 TTTCCGTCAAATACTTGCTG 58 NA Mus musculus 50 Ooep ENSMUSG00000032346 ENSMUST00000034900 2 1 1 122 9 78225869 78225888 GAACCTAGCTGAAATCACCA 59 78225483 78225784 TCTTTCACCTTCACAGCTC 59 NA Mus musculus 50 Ngp ENSMUSG00000032484 ENSMUST00000035061 1 1 1 126 9 110323391 110323409 TAAAGACTGCGACTTCCTG 59 110324280 110324787 TTCTTGGGTATCCTCTCGA 59 NA Mus musculus 50 Ccdc88a ENSMUSG00000032740 ENSMUST00000040182,ENSMUST00000101427 1 2 2 149 11 29377451 29380501 AAAGAAACAATGCTACGCTG 59 29380613 29380631 TCTGAAGCGTGGTATTCTG 59 NA Mus musculus 50 Tpsg1 ENSMUSG00000033200 ENSMUST00000024999 3 1 1 175 17 25509439 25509457 GTTTCAAACTCGGGAAGTC 58 25510120 25510140 TAATCAGACGAGTTCACAGAC 59 NA DesignNoJunction Mus musculus 50 AA467197 ENSMUSG00000033213 ENSMUST00000047498,ENSMUST00000110512 3 2 2 102 2 122463865 122464006 AGGAACTCATTCCTTTGGC 59 122464072 122464963 TTCCGATCAATAACCACGT 58 NA Mus musculus 50 EG333669 ENSMUSG00000033255 ENSMUST00000099577,ENSMUST00000037672 1 2 2 90 10 75439149 75441058 GTATACCATCACAGGTGGC 59 75441112 75441130 ACCCATTAACAAGGCTGAG 59 NA Mus musculus 50 Aspm ENSMUSG00000033952 ENSMUST00000053364,ENSMUST00000097554 3 2 2 80 1 141358487 141359642 TTTCTAAAGTGAACGCTGC 58 141359686 141359704 CTTTAGTAGGTGCTTTCGG 57 NA Mus musculus 50 Scaper ENSMUSG00000034007 ENSMUST00000037408,ENSMUST00000037110,ENSMUST00000098748,ENSMUST00000114279 1 4 4 106 9 55401321 55403901 ATTCATCCAGGACTTTGCA 59 55398634 55398652 ATCTGTTAGCCAGTTCCAG 58 NA Mus musculus 50 Ccs ENSMUSG00000034108 ENSMUST00000037246 1 1 1 84 19 4825660 4825783 AATTCTGGGAAGAGGTTGG 59 4825594 4825612 CATCACAGGAGCAGATCTG 59 NA Mus musculus 50 Vps18 ENSMUSG00000034216 ENSMUST00000037280 2 1 1 192 2 119118518 119118665 CCATACTGGCTCTCATCTG 59 119118820 119118839 AAAGATCTGTCCTTGAGCTG 59 NA Mus musculus 50 Flvcr2 ENSMUSG00000034258 ENSMUST00000040461 2 1 1 82 12 87127108 87127127 TGCTTCCTACTTAAGTTCCA 58 87127172 87137136 CAGCATTCAGACCATAGGT 59 NA Mus musculus 50 Pla2g3 ENSMUSG00000034579 ENSMUST00000044682,ENSMUST00000064265 3 2 3 105 11 3389841 3389860 CTATGGCATCCGAAATTTCC 59 3390176 3390194 CATGATGTCGGAGATGGAG 59 NA DesignNoJunction Mus musculus 50 Dio1 ENSMUSG00000034785 ENSMUST00000082426 3 1 1 195 4 106966521 106966540 TAAGAACAACGTGGACATCC 59 106965019 106966363 AGCTTTACCCTTGTAGCAG 59 NA DesignRelaxed Mus musculus 50 Lepr ENSMUSG00000035212 ENSMUST00000030254,ENSMUST00000106927 2 2 2 81 4 101328890 101330450 GTGTGGATGTGATCAAGTG 58 101330494 101330513 AAGAAGCCTTGAATTGTGAG 58 NA Mus musculus 50 Abca17 ENSMUSG00000035435 ENSMUST00000039324,ENSMUST00000115381 1 2 2 80 17 24472595 24483093 CTTTGAAGTTCTAGGCTTTCC 58 24472535 24472556 ACCAGTATGTAGAAAGACTTGG 59 NA Mus musculus 50 BC051227 ENSMUSG00000035559 ENSMUST00000038626 3 1 1 60 8 73282920 73283023 CTATCTGAAGTACTGGGTCC 58 73282879 73282897 TCAGTTTCAGTCTGCACAG 59 NA DesignRelaxed, InUTR Mus musculus 50 Hoxc9 ENSMUSG00000036139 ENSMUST00000001706 3 1 1 129 15 102812588 102812606 AAGCACAAAGAGGAGAAGG 59 102814402 102814421 GAAACTCCTTCTCCAGTTCC 59 NA DesignNoJunction Mus musculus 50 Cpz ENSMUSG00000036596 ENSMUST00000038676 3 1 1 133 5 35850867 35850885 CAGAGCCTATGCTGATGTC 59 35849446 35850771 TGAAGTCAGACATACCTCCA 59 NA Mus musculus 50 Aaas ENSMUSG00000036678 ENSMUST00000041208 3 1 1 98 15 102176098 102176927 TAACTAACTGGTCCAGCTG 58 102176018 102176037 TATAAACACGGATGGAGTCG 59 NA Mus musculus 50 1700010C24Rik ENSMUSG00000036800 ENSMUST00000022953 2 1 1 80 15 71287392 71287412 AGACATTCATAGAACTGGGAC 59 71284363 71287350 CTGCAAATGTATCCGTCTG 58 NA Mus musculus 50 Rnf139 ENSMUSG00000037075 ENSMUST00000036904 3 1 1 75 15 58720983 58721002 AACTCCTACTACGATTCCAG 58 58721040 58729872 CAACTATACCAAGGAGCCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2210407C18Rik ENSMUSG00000037145 ENSMUST00000108821,ENSMUST00000048801 1 2 2 80 11 58426057 58426078 GTACAAGTACCTGTCTAACCTC 59 58425619 58426019 CTAGGTTTGTATCTGGAGATGG 59 NA Mus musculus 50 Zfp692 ENSMUSG00000037243 ENSMUST00000049353 3 1 2 91 11 58127491 58127509 TTCTGTGCTCGATCTTTCC 59 58127564 58127693 CCACATATCTCACACTGCA 59 NA Mus musculus 50 Dennd4c ENSMUSG00000038024 ENSMUST00000082026,ENSMUST00000045512 2 2 2 80 4 86448946 86451281 GCATCGAGAAGTTGTTTCC 59 86451414 86451432 TCAATCTGGTGTCTTCTGC 59 NA Mus musculus 50 Btbd10 ENSMUSG00000038187 ENSMUST00000047091 3 1 1 92 7 120471915 120471934 ATATCGATTCCTGAACTGCG 59 120469479 120471861 CATAAGGGCACTGAGATCTC 59 NA Mus musculus 50 Fbxo8 ENSMUSG00000038206 ENSMUST00000040218,ENSMUST00000110322 1 2 2 80 8 59043626 59043644 AACTGACCTTTGCTTAGCT 59 59043686 59048095 GTAGATTTACACAACCCTTGC 59 NA Mus musculus 50 Pth2 ENSMUSG00000038300 ENSMUST00000042754 2 1 1 60 7 52437101 52437119 GACTCTTACATGCAGAAGC 58 52437142 52437161 GACAGGCTCTTTATTAGGCT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zfp280d ENSMUSG00000038535 ENSMUST00000098576,ENSMUST00000043096,ENSMUST00000062088 1 3 3 80 9 72208133 72209745 CATCACATTCTGGAAGTAAGC 59 72209787 72209805 CAGCTTCACATACACTTGC 59 NA Mus musculus 50 Edg2 ENSMUSG00000038668 ENSMUST00000107575,ENSMUST00000107574,ENSMUST00000055018,ENSMUST00000107571,ENSMUST00000107566 1 5 6 64 4 58517500 58517518 CAGCCCTGTAATTTCACAG 58 58500057 58500075 ACTCATTGTAGAAGCACTG 57 NA DesignNoJunction Mus musculus 50 Slco4a1 ENSMUSG00000038963 ENSMUST00000038259,ENSMUST00000038225 2 2 2 81 2 180199525 180200314 TCTATATCGCCATCTTCTACAC 58 180200356 180200374 TAAACGTTTAGCATGGCTC 58 NA Mus musculus 50 Rlbp1 ENSMUSG00000039194 ENSMUST00000053718 1 1 1 81 7 86524898 86524916 GACAAGTATGGTCGAGTGG 59 86522262 86524856 CCTGTAAGATCTCATCAAAGGT 59 NA Mus musculus 50 Zfp800 ENSMUSG00000039841 ENSMUST00000115320,ENSMUST00000115321,ENSMUST00000035930 1 3 3 80 6 28206517 28210727 TGCGAACCAGTTTATATCCT 58 28206456 28206477 CTGAATACCAGATTTGGATGTC 58 NA Mus musculus 50 Vprbp ENSMUSG00000040325 ENSMUST00000055009,ENSMUST00000098425 1 2 2 80 9 106731495 106733194 ACCAATCCTTACCAGAATGTC 59 106733233 106733254 TCATCAAATGGATCTGGATCTC 59 NA Nonspecific Mus musculus 50 Cdh18 ENSMUSG00000040420 ENSMUST00000040427 1 1 1 81 15 23296706 23296724 CTTTCTGGATCCACCACTG 59 23296767 23312549 GTTGATAGTGTTTCTGTGGGA 59 NA Mus musculus 50 Prdm13 ENSMUSG00000040478 ENSMUST00000095141,ENSMUST00000076206 3 2 2 88 4 21611057 21611075 GTGGATAGGGTTAATCCGG 59 21610676 21611007 GATAGAAGATCTGTCCTCCTG 58 NA Mus musculus 50 Apobec1 ENSMUSG00000040613 ENSMUST00000112586,ENSMUST00000112587,ENSMUST00000112585 3 3 3 88 6 122531756 122538170 ACTCTGAGGAGAAGAATTGAG 58 122531688 122531706 ATCTCATACAGCAGACAGG 58 NA Mus musculus 50 Pcf11 ENSMUSG00000041328 ENSMUST00000040360,ENSMUST00000107182 1 2 2 60 7 99818057 99818075 GTCGGGATTATCAGTCGTC 59 99818015 99818033 ATATTGATGTGCGGTTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rims1 ENSMUSG00000041670 ENSMUST00000097811,ENSMUST00000097810,ENSMUST00000097809,ENSMUST00000115273,ENSMUST00000081544,ENSMUST00000097808 1 6 7 80 1 22369618 22387546 GCAGTATAGAACAAGCGAG 57 22369556 22369574 TTGTCTGCTTAAATCGGTG 58 NA Mus musculus 50 Amot ENSMUSG00000041688 ENSMUST00000039988 3 1 1 84 X 141914601 141914619 CTGTCTGATGAGAATCGCA 59 141910870 141914553 TTTCTGTCTCCACCTTCTG 58 NA Nonspecific Mus musculus 50 1810015A11Rik ENSMUSG00000041774 ENSMUST00000115702,ENSMUST00000115706,ENSMUST00000069064 3 3 3 88 16 17147423 17147441 TTCTTTCTCGGCAAGATGG 59 17147697 17147716 AGTTGAGCTTCTAGTTCCTC 58 NA DesignNoJunction Mus musculus 50 Mettl8 ENSMUSG00000041975 ENSMUST00000112186,ENSMUST00000064905,ENSMUST00000090849 2 3 4 60 2 70818478 70819924 TCGAATACTAGAGGTTGGC 58 70818436 70818454 CAAGGTGTTCAGGATTGGA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Sln ENSMUSG00000042045 ENSMUST00000048485 3 1 1 61 9 53701313 53701332 TTCACAGTTGTCCTCATCAC 59 53701355 53701374 CAGTATTGGTAGGACCTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cmklr1 ENSMUSG00000042190 ENSMUST00000047936 1 1 1 80 5 114064942 114066547 GGTCTCCAAAGAGATGGAG 59 114064880 114064898 AAGTAGCCAAAGCCATCAG 59 NA InUTR Mus musculus 50 Adrbk2 ENSMUSG00000042249 ENSMUST00000065167 3 1 1 89 5 113395988 113396006 CAATTCTCAAAGCAAGCTG 57 113390654 113395936 TTCTTCTATGTATGGCTGGA 57 NA Mus musculus 50 Ccr8 ENSMUSG00000042262 ENSMUST00000048777 1 1 1 60 9 120003245 120003263 ATGTGTAAGGTGGTCTCTG 58 120003286 120003305 TGATGAAGAACATACTGCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Atpaf2 ENSMUSG00000042709 ENSMUST00000108721,ENSMUST00000045675 2 2 2 102 11 60217412 60217430 TCAAATCCATGTTGCTGAC 58 60215030 60217347 CACTTCTGGATCTGGTACTC 59 NA Mus musculus 50 Smg7 ENSMUSG00000042772 ENSMUST00000111836,ENSMUST00000073441,ENSMUST00000043560 2 3 3 80 1 154697117 154699739 ACCTTCTTTCAGGAACTTGG 59 154697056 154697074 CGTATTCGTCGTTGTTGAC 59 NA Mus musculus 50 4732471D19Rik ENSMUSG00000043183 ENSMUST00000058174 2 1 2 86 13 54627963 54627981 AATACTTCTTACGGCCTCC 58 54628031 54629680 ATTTCTGACCCTTGCTCTC 59 NA Mus musculus 50 Pcdhb12 ENSMUSG00000043458 ENSMUST00000055495 3 1 1 60 18 37596321 37596339 ATCACAGGAGAAATCCGTC 59 37596360 37596381 TGGTATAATGGTGACTTACCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Clrn1 ENSMUSG00000043850 ENSMUST00000055636,ENSMUST00000051408,ENSMUST00000072551 3 3 3 61 3 58650167 58650185 CTTGCTGGATTTCAGTTCC 58 58650124 58650143 GAAGCTACATTAGTGGTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ccbp2 ENSMUSG00000044534 ENSMUST00000111511 1 1 2 115 9 121811161 121811179 TCTGAGGAGTTCTGGAGAC 59 121811256 121815481 TGTCTTCAAGACAAGGTACTC 59 NA InUTR Mus musculus 50 Palb2 ENSMUSG00000044702 ENSMUST00000106469,ENSMUST00000098068,ENSMUST00000063587,ENSMUST00000106468 1 4 4 80 7 129260863 129264579 CACTTCACAGAGGTTCCAG 59 129260801 129260820 CAAACTTCCCAAAGCTACAC 59 NA Mus musculus 50 BC030476 ENSMUSG00000044726 ENSMUST00000060894 3 1 1 174 15 34401174 34401193 GTAATGAACAAGTCACCCTG 58 34401330 34402573 CTGTCTCACCTTCAATGTG 58 NA Mus musculus 50 Ankrd50 ENSMUSG00000044864 ENSMUST00000072068 2 1 1 196 3 38361985 38362003 CTACCTGTTGGTTGACTCC 59 38351413 38361826 TCATACAACTGGAACCACTG 59 NA Mus musculus 50 6330416G13Rik ENSMUSG00000045917 ENSMUST00000077709,ENSMUST00000080336,ENSMUST00000082379 3 3 3 159 4 63231096 63231114 TTGTGCTGGTCTTTGAGAG 59 63238943 63240983 AAGTAGACAAACCAGAGCTG 59 NA Mus musculus 50 5930403N24Rik ENSMUSG00000046463 ENSMUST00000062667 1 1 1 65 10 36860684 36860702 TTTGTTAACAGGCTGTCGT 59 36860731 36860749 GATACCAGGCAAATAGGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tas2r139 ENSMUSG00000047102 ENSMUST00000057686 1 1 1 60 6 42091491 42091509 CCAATGTGGTCAATGTGTC 59 42091533 42091551 AACATTGTCAAAGGAGGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Smgc ENSMUSG00000047295 ENSMUST00000100293,ENSMUST00000088555,ENSMUST00000057109 1 3 6 80 15 91690178 91690197 GCCCTAAGCAGAATGTAGAG 59 91690238 91690718 TTACTTCATTGGAGTCACCTC 59 NA Mus musculus 50 Lancl3 ENSMUSG00000047344 ENSMUST00000069763 1 1 1 171 X 8835121 8835140 GTACCTGGACACATGTATCC 59 8835274 8842664 GAACTGAGCAAACCTTTGG 59 NA Mus musculus 50 Zbtb44 ENSMUSG00000047412 ENSMUST00000061588 1 1 3 132 9 30871806 30871824 TTCTACCAGCAGTACAGAG 57 30871919 30874254 TGGTTTAATTCCTGAGTGGA 58 NA Mus musculus 50 Zfp454 ENSMUSG00000048728 ENSMUST00000050595,ENSMUST00000078418 1 2 3 60 11 50697192 50697211 AACTACAGTAACCTGGTCTC 58 50696743 50696763 GAAAGAACATATCTGGTTGGG 58 NA DesignNoJunction Mus musculus 50 Serpinb13 ENSMUSG00000048775 ENSMUST00000027564 2 1 1 83 1 108895271 108895469 TTCTGGCTGAATAAGAACCT 58 108895515 108895533 CAGGTCCTCTAAGAAGGTG 58 NA Mus musculus 50 2310057N15Rik ENSMUSG00000048830 ENSMUST00000054223 2 1 1 60 16 88773875 88773893 CTTCCCTGAGTTATGGGTC 59 88773833 88773852 TGAAATCCTGTAGAAGCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 AI132487 ENSMUSG00000048856 ENSMUST00000057026 2 1 1 88 12 110093821 110094159 TCAGCCAGATGTCTTAGGT 59 110094211 110094229 ACTTGATCACATCCATGGG 59 NA Mus musculus 50 Bmyc ENSMUSG00000049086 ENSMUST00000061483 1 1 1 99 2 25562701 25562719 GATAGCTTCTCCATCGCAG 59 25562782 25562800 TGTTCTTCACGAAGGTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Vgll2 ENSMUSG00000049641 ENSMUST00000058347 2 1 1 70 10 51742545 51742563 TTATGTACCAGGTCTACGG 57 51742597 51744868 TAGTTTCTGGTGGTAGGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr466 ENSMUSG00000049806 ENSMUST00000058907 3 1 1 60 13 65253904 65253925 TCTGTAACCCTCTTCTATACTC 57 65253945 65253964 GATACCAACAATCCACAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rlf ENSMUSG00000049878 ENSMUST00000056635 2 1 1 80 4 120860870 120860889 ATTACTGCTTTCAGTGTCTG 57 120855333 120860827 TCATGTGACTCCTGTAGAG 57 NA Mus musculus 50 A830091I15Rik ENSMUSG00000050132 ENSMUST00000108287,ENSMUST00000061174 3 2 2 85 11 78301120 78301139 GACCTGCTTCTAAGACTCAC 59 78300949 78301072 TCCCTAAAGAACCTCTTGC 58 NA Mus musculus 50 Eif5a2 ENSMUSG00000050192 ENSMUST00000060500 1 1 1 60 3 28681097 28681116 GAGATGTCAACTTCCAAGAC 58 28681138 28681668 CAATTCCAACAAGGTGTACC 59 NA DesignNoJunction Mus musculus 50 Cxcr3 ENSMUSG00000050232 ENSMUST00000056614 2 1 1 76 X 98928364 98929386 GGTTAGTGAACGTCAAGTG 58 98928306 98928324 CATAATCGTAGGGAGAGGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem151b ENSMUSG00000050405 ENSMUST00000052694 3 1 1 238 17 45682897 45683721 ACTACTACCCAGGTCTACC 58 45682677 45682695 TCCATGTAGTCATCCAAGC 59 NA DesignRelaxed Mus musculus 50 V1re7 ENSMUSG00000050933 ENSMUST00000061278 2 1 1 60 17 21026907 21026927 GAACATCGCATGAATCAAGAG 59 21026867 21026887 CCAATAAAGAGTGACACTAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 9930021J17Rik ENSMUSG00000051000 ENSMUST00000062080 1 1 1 117 3 85469364 85469382 AGTTTGCTTCTGTGGAGAG 59 85465131 85469284 TGAATGGGATCTTTGGTGAG 59 NA Mus musculus 50 Msrb3 ENSMUSG00000051236 ENSMUST00000092143 3 1 1 95 10 120262182 120287040 GTTGTTCAAGTCAGAAACCA 58 120228498 120228516 AAGTCATCTGTGAACTCGA 58 NA Mus musculus 50 Tacstd2 ENSMUSG00000051397 ENSMUST00000058178 3 1 1 83 6 67485100 67485118 ATTCAGATAGAGCTTCGGC 59 67485035 67485053 CCTTTCGAAGTAGTAGGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Otop1 ENSMUSG00000051596 ENSMUST00000063136,ENSMUST00000114099 3 2 2 84 5 38685774 38689101 AAACACTGGAAAGGTTTGG 58 38689148 38689167 TGCTTTGATTCATTCAGGAC 58 NA Mus musculus 50 OTTMUSG00000012358 ENSMUSG00000052248 ENSMUST00000064026 2 1 1 287 2 44967835 44967854 CTAAGAGAAGGACTTGCTCC 59 44968709 44968727 AGAGAAACTTGGCGATCAC 59 NA DesignNoJunction, InUTR Mus musculus 50 Il1rapl1 ENSMUSG00000052372 ENSMUST00000113966,ENSMUST00000078875,ENSMUST00000113964,ENSMUST00000113965 1 4 4 80 X 84292098 84545931 TGTTACAGCTCCTCTAACTG 58 84292037 84292055 AGTTGAGTCTCCTGAACTG 58 NA Mus musculus 50 Mpp3 ENSMUSG00000052373 ENSMUST00000107168,ENSMUST00000100400,ENSMUST00000062801,ENSMUST00000107167 3 4 4 208 11 101886451 101886695 GATTCATGAGAAACTCCGC 58 101884730 101884748 CAGGATCGAAGTTCTTCTG 57 NA DesignNoJunction Mus musculus 50 BC049349 ENSMUSG00000052446 ENSMUST00000109999 1 1 3 80 8 74489753 74489773 GATCCTTCCCAGAAGATTCTC 59 74489814 74490012 TTCCCAGTTTATGCCTACAG 59 NA Nonspecific Mus musculus 50 3110006E14Rik ENSMUSG00000052981 ENSMUST00000065118 2 1 1 85 13 69877712 69877731 TAAACGAGAACCTCTTCGAC 59 69877646 69877664 GTTGGTCTCCTTCATGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Aldh7a1 ENSMUSG00000053644 ENSMUST00000116635,ENSMUST00000066208 2 2 2 81 18 56708109 56708127 TCTGATCACAGGGAATGTC 58 56704687 56706567 GGCTATGATCTTTGTGACAG 58 NA Mus musculus 50 Lgals4 ENSMUSG00000053964 ENSMUST00000066723,ENSMUST00000015291 3 2 2 86 7 29626250 29626269 GCTTTATGAATGGCTCTTGG 59 29626315 29626515 GGATTGACAGATCAAAGAACTG 59 NA Mus musculus 50 Ifi205 ENSMUSG00000054203 ENSMUST00000059226 1 1 1 124 1 175947784 175956673 ATTCCTTCGGCTAAGAACC 59 175947678 175947699 GATTCATATTCAAACGGGTCTG 59 NA Nonspecific Mus musculus 50 4930517O19Rik ENSMUSG00000054391 ENSMUST00000067431 1 1 1 161 14 100612731 100612751 CGTGAGATTCAGAGTAATCCT 59 100631983 100643836 GTAGAAGCTGTGACCTTGG 59 NA InUTR Mus musculus 50 Ugt1a1 ENSMUSG00000054545 ENSMUST00000113138,ENSMUST00000113135,ENSMUST00000113137,ENSMUST00000113134,ENSMUST00000014263 3 5 11 252 1 90035888 90035906 GAAGGGAAAGCTGACTCAG 59 90112453 90112726 AGTCTTTGGATGACCAAGC 59 NA DesignRelaxed Mus musculus 50 E130309D02Rik ENSMUSG00000054615 ENSMUST00000067765 2 1 1 61 5 144077306 144077324 CTGATCCTTCTGTTCCAGG 59 144077349 144077367 TTAAGAGGGTCCAGGAGTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Gats ENSMUSG00000055397 ENSMUST00000056756 1 1 1 89 5 134619583 134619601 ACAGTATTTGCACGGAGAG 59 134619654 134619672 GTCTAGAGCTTTGTGGACC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Maf ENSMUSG00000055435 ENSMUST00000069009,ENSMUST00000109104 1 2 2 60 8 118230734 118230752 ACTGGCAATGAACAATTCC 58 118230692 118230713 GTCATTAACATATTCCATGGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nkain3 ENSMUSG00000055761 ENSMUST00000102998 2 1 1 91 4 20210069 20210087 CATACGTCTCAGTCACAGG 59 20173053 20210015 GGTTCTTCTAACCGATAGCA 59 NA Mus musculus 50 Hist1h2bc ENSMUSG00000056438 ENSMUST00000070542 2 1 1 60 13 23776036 23776056 GACTTCTCCTACTTATAGGGC 58 23775996 23776014 ATTAGCTGAGACTGGTTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr787 ENSMUSG00000057617 ENSMUST00000077836 1 1 1 60 10 128899908 128899928 TTCTTCCTCCAGAATTTCTCC 59 128899949 128899968 ATCTAGGGATGGAAACACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 V1re13 ENSMUSG00000059206 ENSMUST00000079113 3 1 1 60 7 11333244 11333264 CACCCTTTGTTCTTATGAGTC 58 11333204 11333223 CTTAACCAGACCAAACTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Slc14a1 ENSMUSG00000059336 ENSMUST00000091813,ENSMUST00000025433 3 2 2 80 18 78308138 78308157 GTAAACTCTTCACACCTGTC 58 78306780 78308096 GAAGAGACTTCAATAGCTCC 57 NA Mus musculus 50 Gm317 ENSMUSG00000059562 ENSMUST00000073277 1 1 1 83 17 25305310 25305328 CATGAGAATCTGGAGGCTG 59 25305375 25305484 CTTCTCTTGGAGCAGTTCC 59 NA Mus musculus 50 Unc5c ENSMUSG00000059921 ENSMUST00000106236,ENSMUST00000075282,ENSMUST00000106235 1 3 3 81 3 141420787 141420806 CAAATTATACCTGTGTTGCC 57 141420850 141431417 CCACCATTAACATACACGA 57 NA Mus musculus 50 Spink12 ENSMUSG00000061144 ENSMUST00000081271 3 1 1 175 18 44264417 44266177 TCTCTGTAGATGCTGTGAG 58 44267466 44267722 CAAACTTCTTTCCATGGCT 58 NA Mus musculus 50 Csn1s2b ENSMUSG00000061388 ENSMUST00000072539,ENSMUST00000101057,ENSMUST00000113279 2 3 3 80 5 88242973 88242991 AGCAGAATATGGATGTGGC 59 88244144 88245678 CTTCAACAGATTCCATTTGGG 59 NA Mus musculus 50 Olfr372 ENSMUSG00000061561 ENSMUST00000074540 2 1 1 60 8 74623687 74623706 TTCAGATTTCATCCTCATGG 57 74623729 74623747 GAAGAACAGGACAAGATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ctrc ENSMUSG00000062478 ENSMUST00000105781 1 1 2 143 4 141402162 141402180 TTGGGAATTACAGTCCTCG 58 141399696 141401099 GTAGGTCAAGTTTGTGCTG 58 NA Mus musculus 50 Rnf183 ENSMUSG00000063851 ENSMUST00000107455,ENSMUST00000079420,ENSMUST00000107454 3 3 3 140 4 62091524 62091542 TTTCAGTACCTGGTACAGC 58 62089526 62089544 GTGTTGTTGAAAGGGTTCC 59 NA DesignNoJunction, InUTR Mus musculus 50 V1rc11 ENSMUSG00000063974 ENSMUST00000075750 3 1 1 75 6 66666422 66666440 TATCAATGGGAGTGAGACC 58 66666365 66666384 CCTGATGATGTAGTTCATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-100 ENSMUSG00000065576 ENSMUST00000083642 1 1 1 61 9 41339526 41339544 TAGATCCGAACTTGTGCTG 59 41339564 41339587 CCTAACAGACACATACCTATAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4921513D11Rik ENSMUSG00000066944 ENSMUST00000086570 3 1 1 106 17 80026132 80026809 AAATGCTTAAGCTGCTGGA 59 80026879 80026897 TTTGTTTGTAACGCACGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Capn6 ENSMUSG00000067276 ENSMUST00000087316 1 1 1 80 X 140239026 140239226 CCAATGAAACTGTCAATCCA 58 140238965 140238983 GCACAGTATTCTTCTGGAC 57 NA Mus musculus 50 ENSMUSG00000069038 ENSMUSG00000069038 ENSMUST00000091180 2 1 1 60 X 10905035 10905055 TTACCAGAGGGAAATCATTCC 59 10905076 10905095 CACTATCGAGGATTACAGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gprin1 ENSMUSG00000069227 ENSMUST00000099506 2 1 1 120 13 54843453 54850932 GGGATATCCGATACATGGC 59 54841956 54841974 TCAAGTCAGCTATCTGGTC 58 NA DesignNoJunction, InUTR Mus musculus 50 Olfr707 ENSMUSG00000069390 ENSMUST00000088687 1 1 1 60 7 114034783 114034803 GATTTCGGTGTTCTATTCAGC 59 114034743 114034762 TCTCAGGCTGTAAATGATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Scyl2 ENSMUSG00000069539 ENSMUST00000092227,ENSMUST00000105294 3 2 2 80 10 89116893 89116912 GATAAAGAACAGTGTCCTGC 58 89115785 89116851 ATGTTTAGACAGAGCTCCTG 59 NA Mus musculus 50 Taar8c ENSMUSG00000069701 ENSMUST00000092654 3 1 1 60 10 23821174 23821195 GGATTGAAAGCTTAGTAAGTGC 59 23821135 23821153 TGATTGACAACAACTTGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001074399.1 ENSMUSG00000069895 ENSMUST00000093162 1 1 1 189 8 112259260 112259374 CAAGAACTTAGGGAGGCTC 59 112257527 112257545 ATATTGCTTTGTGTTCCCG 58 NA InUTR Mus musculus 50 OTTMUSG00000009332 ENSMUSG00000070737 ENSMUST00000106097,ENSMUST00000094712 2 2 2 61 4 126805224 126806098 CTTGATCCTACTCATGATGGG 59 126806121 126806139 TACTCAGTGGCTCTTTCAG 58 NA DesignNoJunction Mus musculus 50 NP_001074708.2 ENSMUSG00000070873 ENSMUST00000094904 2 1 1 81 7 4189954 4189974 ATCGCTGTTACTATAAGACCC 59 4190014 4190173 TTACTATAGAGTCCTGTCACTG 58 NA Mus musculus 50 NP_996891.1 ENSMUSG00000071066 ENSMUST00000072976 2 1 1 75 10 128623652 128623671 AAGGGTGTGATGATTCTCAC 59 128623596 128623615 CTTGCCTATTCCTAAGTGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mug2 ENSMUSG00000071204 ENSMUST00000078431 2 1 1 81 6 122088502 122088521 AATTGGAAAGGAGAAACCTG 57 122088564 122089414 AGTGTAGGGATAATGAAGGA 57 NA Mus musculus 50 Timm8a2 ENSMUSG00000071229 ENSMUST00000045976 3 1 1 60 14 122434131 122434151 CAGTTCATCTTGAATCGACTG 59 122434172 122434191 GTCTTTCTGAGAAGAGTGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 2610005L07Rik ENSMUSG00000071796 ENSMUST00000096485 1 1 1 80 8 19873497 19873515 CAACCCTCCAGAGTTTCTG 59 19869806 19873455 GGATAACTGATGTTCCTACCC 59 NA Nonspecific Mus musculus 50 Igh-6 ENSMUSG00000072806 ENSMUST00000100999 1 1 1 60 12 114655686 114655704 ACTCGTCACCAAATTCCAG 59 114655644 114655664 GGTATGAGAAGTACCATACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nup62cl ENSMUSG00000072944 ENSMUST00000101212,ENSMUST00000113003 3 2 2 81 X 136569446 136573599 GGAACTCTCATCCACAACC 59 136569383 136569402 GTTGAAGCCACTTGTAATCG 59 NA Mus musculus 50 EG624120 ENSMUSG00000072962 ENSMUST00000072800 3 1 1 90 5 44492664 44492682 GCTCTATAACCAGTCCTCC 58 44492736 44492754 TAGTTTGTCTTCCCGAAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073459 ENSMUSG00000073459 ENSMUST00000097404 2 1 1 60 17 13398906 13398925 ACATAGTGAGACACAGTCTC 58 13398947 13398966 TAAGACATGCAACTATGGGT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 ENSMUSG00000073607 ENSMUSG00000073607 ENSMUST00000097631 1 1 1 68 18 34381438 34381456 TCCAAAGCCTATGACAGAG 58 34381388 34381406 CTAGTGGAGTCTACGATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr568 ENSMUSG00000073965 ENSMUST00000098216 3 1 1 60 7 110026242 110026262 TTCTCTACTACAGGGTTTGAC 58 110026282 110026302 ATCGGATGATCAGTACATAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074204 ENSMUSG00000074204 ENSMUST00000098575 2 1 1 60 9 72233240 72233259 TAACCCTCAGTGTTATTCCC 58 72233199 72233217 ACATCAGTAAGAACGTCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 EG620627 ENSMUSG00000074377 ENSMUST00000108520,ENSMUST00000094824 1 2 2 85 7 14573598 14573616 GACCACGACTCATAACCTC 59 14570309 14573550 GATGAGATAAATCGCCTTGG 58 NA Mus musculus 50 Smcp ENSMUSG00000074435 ENSMUST00000098888 2 1 1 84 3 92388104 92388122 TACATCTGGCCAAACTCTG 59 92388038 92388056 TGACTTCTTCTGGTTCCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 A430078G23Rik ENSMUSG00000074497 ENSMUST00000098966,ENSMUST00000098965 1 2 2 80 8 3381971 3384905 CTCAAGCAAGGAATGTAGC 58 3384949 3384967 TCCATACAGCTGATCTCAC 58 NA Mus musculus 50 1700101G07Rik ENSMUSG00000074571 ENSMUST00000077067 1 1 1 60 2 169408191 169408210 CCACCAAGTTCACATATCTC 57 169408233 169408251 TTAAAGCCACATCAGAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm1006 ENSMUSG00000074665 ENSMUST00000109757,ENSMUST00000109759,ENSMUST00000099181 2 3 3 84 2 153785440 153787261 GCAATGAATGCTATACTGGG 58 153787308 153787326 CCAACACATCAATGTCTGC 59 NA Mus musculus 50 ENSMUSG00000074807 ENSMUSG00000074807 ENSMUST00000099385 1 1 1 202 2 128793018 128793036 TAGCCATTGGAGGAAACTG 59 128792834 128792852 AGGAACATCGAGAAATGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074828 ENSMUSG00000074828 ENSMUST00000099413 1 1 1 60 19 43913930 43913948 GACTCAGGGTTATCAAAGG 57 43913972 43913990 ACCAGTTAAGAGAAAGCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Grem1 ENSMUSG00000074934 ENSMUST00000099575 2 1 1 63 2 113590218 113590236 AAGAAAGGTTCCCAAGGAG 59 113590173 113590191 TCTGCTCAGAGTCATTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr140 ENSMUSG00000075068 ENSMUST00000111506,ENSMUST00000099757 2 2 2 60 2 89892000 89892018 AACAGCTCAGCTCTTTCTG 59 89891958 89891977 GTGGTTTATCACATTGGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1154 ENSMUSG00000075146 ENSMUST00000099844 3 1 1 71 2 87743630 87743648 TTCCTCTGTATGCTGTCCT 59 87743577 87743597 CAGATCCACAAGTAATTTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075290 ENSMUSG00000075290 ENSMUST00000100025 3 1 1 123 16 27899943 27911687 ACAAGGAGGTTTCTCTTCTC 58 27915267 27915286 ATCATACCGGTAGTCTTCAG 58 NA InUTR Mus musculus 50 IGKV1-131 ENSMUSG00000076505 ENSMUST00000103306 2 1 1 60 6 67716200 67716219 TGAATTGGTTACAACAGAGG 57 67716159 67716180 TTGGATACCAGATAGAATAGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV10-3 ENSMUSG00000076686 ENSMUST00000103495 3 1 1 107 12 115761953 115762059 TATCAAGGTGTGCATTGTG 58 115761864 115761882 ATTGAAGGTGAAACCAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV3-4 ENSMUSG00000076858 ENSMUST00000103670 2 1 1 66 14 54397173 54397192 AAGAAAGACAAACGACTCTC 57 54397221 54397239 AGAAGTACACAGCTGAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV17 ENSMUSG00000076860 ENSMUST00000103672 1 1 1 92 14 54426353 54426507 TCACTGAGAGGAAACAGTG 58 54426563 54426581 ATAACTGCATCTGAGCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Q3UFE0_MOUSE ENSMUSG00000078181 ENSMUST00000104980 3 1 1 60 5 31948043 31948063 ATGACAAGAAGAGTAGAGCTG 59 31948084 31948103 CACAAATGGAACCTTTGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ier5l ENSMUSG00000078200 ENSMUST00000104997 2 1 1 65 2 30327516 30327534 CTACATTTCCCATCATGCC 58 30327469 30327487 GTGAAGGAATCGACTTCCT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 1190007F08Rik ENSMUSG00000078350 ENSMUST00000105141 3 1 1 61 4 153396968 153396986 TGAATAACGACTGTGGCTC 59 153396925 153396943 CAGAAAGATTTGAGGCCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cyp4a12b ENSMUSG00000078597 ENSMUST00000094887 2 1 1 61 4 115087195 115105057 TCATGCTGGATAAATGGGA 58 115105082 115105100 GTGTTGGAAGATCTCCAGG 59 NA DesignRelaxed Mus musculus 50 NP_001078999.1 ENSMUSG00000078746 ENSMUST00000108026 1 1 1 88 4 41836970 41836988 ATAGAAGAAGCTGCTGTCG 59 41838063 41838081 TTCTTCTCGGGAAAGTCTC 58 NA Nonspecific, DesignNoJunction Mus musculus 50 A2ARV8_MOUSE ENSMUSG00000078872 ENSMUST00000108970,ENSMUST00000108969,ENSMUST00000108968 3 3 3 80 2 176869009 176869028 ATCCTTCTCAGAAGAGTCTC 57 176869068 176869295 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 CRSPL_MOUSE ENSMUSG00000078949 ENSMUST00000109416 1 1 1 83 2 163325595 163325613 CTGTAGCAGCATCAATGTG 58 163325660 163328069 ATCCAGTTGCCCTTAATGG 59 NA Mus musculus 50 1700049E17Rik ENSMUSG00000079271 ENSMUST00000095985 2 1 1 60 14 42504760 42504779 TTCGAATCTTGGACATTGAC 58 42504800 42505765 GTGAATTCAGTGTTCATCCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Cntf ENSMUSG00000079415 ENSMUST00000025599 1 1 2 94 19 12839886 12844674 CAGAACGGTTGATTTAGGG 58 12839810 12839828 CCTTGCTAGCCAGATAGAG 58 NA Nonspecific, InUTR Mus musculus 50 Q0WXH7_MOUSE ENSMUSG00000079505 ENSMUST00000113886 2 1 1 101 17 35517117 35517322 CTGAATAGTGTGAGAGCCG 59 35517034 35517052 GAAACACAGAAAGCCAAGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 NP_001092788.1 ENSMUSG00000079637 ENSMUST00000115190 2 1 1 60 X 34868213 34868231 ATTACAAGCTTGATGTGGG 57 34868254 34868435 AGAGTCTTTATACCATTCGC 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Pak7 ENSMUSG00000080197 ENSMUST00000116407 1 1 1 81 2 136213441 136213462 GATATAACAGATGTAGCAGCAG 58 136095205 136213399 AGTGTATTTCTGGTGGCTG 59 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ctsf ENSMUSG00000080270 ENSMUST00000116569 2 1 1 60 19 4856263 4856281 TTTCAGCTCATTCCTTCCA 58 4856305 4856526 CTTCACAGAGAAGTCCTGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 NP_001098011.1 ENSMUSG00000080315 ENSMUST00000116664 3 1 1 60 17 18200273 18200291 CAACCGTATTTAAATGGCG 57 18200315 18200986 TCAGGAAAGTGTTAAGCTG 57 NA DesignRelaxed Mus musculus 50 Myo18a ENSMUSG00000000631 ENSMUST00000108375,ENSMUST00000108376,ENSMUST00000000645,ENSMUST00000092884 2 4 10 81 11 77667383 77668187 CTCATCAACAGTTTGCAGG 59 77671232 77671250 CTGAGTCCACATCTGAGTC 59 NA Mus musculus 50 Ramp2 ENSMUSG00000001240 ENSMUST00000001271,ENSMUST00000107282 1 2 2 120 11 101108994 101109134 GATTAGCAGGCATTACAGC 58 101109218 101109236 AAAGTGTATCAGGTGAGCC 59 NA Mus musculus 50 Unc119 ENSMUSG00000002058 ENSMUST00000002127,ENSMUST00000100755 3 2 3 95 11 78161751 78162040 CGAGGAGCTAATCAGTGAG 59 78162099 78162117 GCTTTGTTATGCATCACCA 58 NA Mus musculus 50 Slc1a2 ENSMUSG00000005089 ENSMUST00000080210,ENSMUST00000111206,ENSMUST00000111212,ENSMUST00000111211 3 4 7 95 2 102617727 102617745 TTTACGACGACAAGAACCA 59 102617804 102621629 CCAGAGTTACCTTGCACTC 59 NA Mus musculus 50 Crbn ENSMUSG00000005362 ENSMUST00000113239,ENSMUST00000049675,ENSMUST00000013882 2 3 3 86 6 106740981 106744195 ACACAGTCAGATGGAATCC 58 106740913 106740931 TTCTAACTGCACTGCAGAC 59 NA Mus musculus 50 Nelf ENSMUSG00000006476 ENSMUST00000114388,ENSMUST00000114392,ENSMUST00000006646,ENSMUST00000114381 3 4 9 83 2 24912687 24913781 CTATGCAAGCGGTATTCAG 58 24913827 24914545 AGTTCCTCTGGATTACAGAC 58 NA Mus musculus 50 Pcdha1 ENSMUSG00000007440 ENSMUST00000115661 1 1 9 177 18 37114769 37114787 GATCAATTGCAGTCTGCAG 59 37318983 37319001 TTGCACTGGATACTGTTGG 59 NA DesignNoJunction Mus musculus 50 Cpt1c ENSMUSG00000007783 ENSMUST00000063761 3 1 2 92 7 52215279 52215297 CATGGGTATGGTATCTCCT 57 52215037 52215223 GTGAGAGTCTGTTTCTGTG 57 NA Mus musculus 50 Elk3 ENSMUSG00000008398 ENSMUST00000008542,ENSMUST00000105291 2 2 2 163 10 92747647 92747665 AACATGAGCACCTCATCTG 59 92728414 92747521 CTTGATGATGTTCTTGTCGT 58 NA DesignRelaxed Mus musculus 50 Rnf151 ENSMUSG00000008482 ENSMUST00000008626 1 1 1 155 17 24854489 24854507 AGTTCCTGTGTTCTGTCTG 59 24854052 24854070 CTTCGACCATCTTTCTCCT 58 NA DesignNoJunction Mus musculus 50 Vipr2 ENSMUSG00000011171 ENSMUST00000100988 3 1 2 80 12 117333225 117333244 ATGGTCAGAGACATTTCCAG 59 117333285 117336795 CCATGGAGTTGGATCTTACTC 59 NA Mus musculus 50 Pabpc4 ENSMUSG00000011257 ENSMUST00000106243,ENSMUST00000106241,ENSMUST00000080178,ENSMUST00000078734,ENSMUST00000094192 3 5 6 80 4 122967570 122968120 TCAGCCAGTTTGGTAAGAC 59 122968164 122968182 AACTTACAAAGCCAAAGCC 58 NA Nonspecific Mus musculus 50 Ehf ENSMUSG00000012350 ENSMUST00000111179 2 1 6 97 2 103114058 103114076 GATCTCCATGACAACCTCC 59 103105399 103108334 TAATGAAGTAGGTGTGGGAC 58 NA Mus musculus 50 Ehmt2 ENSMUSG00000013787 ENSMUST00000114033,ENSMUST00000078061,ENSMUST00000114028,ENSMUST00000013931,ENSMUST00000097342 1 5 5 82 17 35049398 35049585 GATTTAGATAACAAGGATGGCG 59 35049627 35049646 CACAGGTGGTTAATGAATCG 58 NA Mus musculus 50 Edf1 ENSMUSG00000015092 ENSMUST00000015236 3 1 1 221 2 25415698 25415716 GAAGATGTGGAGACATCCA 58 25416506 25416524 ATAGTCTGCGATGACTTGC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Lrrk1 ENSMUSG00000015133 ENSMUST00000089025,ENSMUST00000015277 3 2 3 143 7 73417973 73419673 AGAATGCCAAAGATTCTTCC 58 73417849 73417867 ACCACACTAGGATGTTGTC 58 NA Mus musculus 50 Setdb1 ENSMUSG00000015697 ENSMUST00000015841,ENSMUST00000107171 1 2 3 80 3 95144134 95144152 CCTACAGCCTATAGCTCCA 59 95143976 95144093 CTTTCTAAGCTTTCAGTGTCAG 59 NA Mus musculus 50 H2afy ENSMUSG00000015937 ENSMUST00000045788 1 1 3 150 13 56185640 56189624 GTGGTGAAGTAGGAAACAC 57 56184607 56184625 CAGTGGATCACAAACTTGG 58 NA Mus musculus 50 Atp1b4 ENSMUSG00000016327 ENSMUST00000115134,ENSMUST00000016471 2 2 2 80 X 35678228 35678247 CTTCAACGTTTCTGAACCTG 59 35678289 35682456 AGACTGTCATTATAGCCCTG 58 NA Mus musculus 50 Birc5 ENSMUSG00000017716 ENSMUST00000081387,ENSMUST00000093906 3 2 3 84 11 117711165 117713982 ATGACAACCCGATAGAGGA 59 117714029 117714048 ACGGTTAGTTCTTCCATCTG 59 NA Mus musculus 50 Pltp ENSMUSG00000017754 ENSMUST00000109316,ENSMUST00000059954 3 2 3 81 2 164679816 164679835 TTAAAGTGTCCAATGTCTCC 57 164678169 164679773 TTATACATCCTCCTGAAGGT 57 NA Mus musculus 50 Myo1c ENSMUSG00000017774 ENSMUST00000102505,ENSMUST00000069057,ENSMUST00000102504,ENSMUST00000108431,ENSMUST00000057572 3 5 6 80 11 75479046 75479064 GGAAATCTCTAGACCGAGG 58 75479108 75479206 TATCCAGAAACCCAGTCAC 58 NA Mus musculus 50 Eya2 ENSMUSG00000017897 ENSMUST00000103082 1 1 4 115 2 165513132 165513151 AGACAGTTTGAATCACTCCC 59 165513229 165550185 TGTTGTAGTCTCTGTGCAC 59 NA Mus musculus 50 Trim37 ENSMUSG00000018548 ENSMUST00000092807 3 1 3 181 11 87015114 87020269 GTTACATACGAAACCGCTC 58 87020412 87020432 CTTCTCAACAGTAGGTAAACC 57 NA Mus musculus 50 Hdac2 ENSMUSG00000019777 ENSMUST00000019911 1 1 2 88 10 36716925 36717207 AATTCCCAATGAGTTGCCA 59 36717257 36717277 GGTTTGTCATGTTTGAAGGAC 59 NA Mus musculus 50 Srgap1 ENSMUSG00000020121 ENSMUST00000020322 2 1 2 85 10 121265814 121268954 TATATGACTACAAGCCGGG 58 121262713 121262731 CAGCTTTCCACAATGAGAG 58 NA Mus musculus 50 Usp15 ENSMUSG00000020124 ENSMUST00000020334,ENSMUST00000105258,ENSMUST00000105259 2 3 3 93 10 122613023 122618740 GACTTCTCAAAGATGGCGA 59 122612948 122612966 AGTTTATTCCAGCCCTCAG 58 NA Mus musculus 50 Vps13d ENSMUSG00000020220 ENSMUST00000020441 3 1 2 126 4 144695797 144695817 TATAAGTACCAAGGAGTCCTG 57 144689963 144695709 TTTCACCTCTGTTTGTCCA 58 NA Mus musculus 50 Med7 ENSMUSG00000020397 ENSMUST00000020665,ENSMUST00000109232 3 2 2 181 11 46250693 46253325 GGATCATCTGTCCCTATCG 58 46253468 46254075 CAATCAAGAACCTAAGACCAG 58 NA InUTR Mus musculus 50 Limk2 ENSMUSG00000020451 ENSMUST00000101642,ENSMUST00000102958,ENSMUST00000101638,ENSMUST00000093394,ENSMUST00000110029 2 5 6 191 11 3253441 3253460 TAACAGCATCTCCAAGTCTC 59 3252370 3253287 TTGTGAGTCACCTTGATGG 59 NA Mus musculus 50 Ogdh ENSMUSG00000020456 ENSMUST00000003461,ENSMUST00000109797,ENSMUST00000079291,ENSMUST00000101554,ENSMUST00000093350,ENSMUST00000101555,ENSMUST00000081894 3 7 7 85 11 6197126 6197145 TTCTTAGTGGGACTAGTTCG 58 6197192 6213799 GTCCCATGACTTATGTACAC 57 NA Mus musculus 50 Elac2 ENSMUSG00000020549 ENSMUST00000071891,ENSMUST00000101049 3 2 3 119 11 64805853 64805952 TATAGTAAGGAGGAAGGGTCC 59 64807744 64807762 AGTATTGCAGTCGAGTGTG 59 NA Mus musculus 50 Dld ENSMUSG00000020664 ENSMUST00000002980 1 1 2 80 12 32017236 32017254 GAATATGGTGCTTCCTGTG 58 32017077 32017096 AGTTTGCTTCTCTAAAGCC 57 NA Mus musculus 50 Grin2c ENSMUSG00000020734 ENSMUST00000019007,ENSMUST00000106554,ENSMUST00000003351 1 3 3 88 11 115117057 115117075 CTACGACTTGTACCTGGTG 59 115116728 115117006 GCTTGTAGTATACCTCACCG 59 NA Mus musculus 50 Mrpl38 ENSMUSG00000020775 ENSMUST00000106439,ENSMUST00000054135 3 2 2 96 11 115995765 115995783 AAGGATTCCTTGTGGACAC 59 115994202 115995574 TTGGGATGTTGGTTAGCAG 59 NA Mus musculus 50 0610010K14Rik ENSMUSG00000020831 ENSMUST00000021180,ENSMUST00000108578,ENSMUST00000100950,ENSMUST00000021181 3 4 9 94 11 70050443 70050461 GAGATAGAGATGCTGAGGG 58 70049702 70050385 TTTATCTGAGCCACTGTCC 58 NA Nonspecific Mus musculus 50 Per1 ENSMUSG00000020893 ENSMUST00000021271,ENSMUST00000102605 2 2 3 166 11 68920416 68920434 CTGTTCAACTCGAGATGCA 59 68920564 68921045 GTAACCTCCACCAATCTGG 59 NA Mus musculus 50 Adam11 ENSMUSG00000020926 ENSMUST00000068150,ENSMUST00000103081 1 2 2 87 11 102634779 102634895 GAGGTGTGAACGAGTATGG 59 102634946 102634964 TTATTCCACATCATGCCCA 58 NA Mus musculus 50 Gfap ENSMUSG00000020932 ENSMUST00000067444,ENSMUST00000077902 3 2 2 81 11 102755745 102755764 AGAGATTCGCACTCAATACG 59 102754892 102755701 GTCTGCAAACTTAGACCGA 59 NA Mus musculus 50 Sfrs5 ENSMUSG00000021134 ENSMUST00000110354,ENSMUST00000110351,ENSMUST00000110352,ENSMUST00000110356 2 4 5 126 12 82048573 82048792 TGATAGACGAAATGCTCCA 58 82050111 82050129 ATCCGCAAAGGTTACTTCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Yy1 ENSMUSG00000021264 ENSMUST00000021692,ENSMUST00000084993 2 2 2 91 12 110044842 110051137 AATTTGCCAGAATGAAGCC 58 110052818 110052836 CCTGAACATCTTTGTGCAG 59 NA Mus musculus 50 Fancc ENSMUSG00000021461 ENSMUST00000021916,ENSMUST00000073029,ENSMUST00000099444 1 3 3 85 13 63431919 63433158 AAATGTTCAGGTTTGTGCTG 59 63431853 63431871 TTCTACCAAGCACGATGTG 59 NA Mus musculus 50 Sh3bp5 ENSMUSG00000021892 ENSMUST00000022449,ENSMUST00000091903,ENSMUST00000100730 1 3 3 138 14 32190687 32190705 CAGATGAGATACACGAGCG 59 32189041 32190585 TCTGATGCCACAGAAATGG 59 NA Mus musculus 50 Fyb ENSMUSG00000022148 ENSMUST00000090461 3 1 2 136 15 6593748 6594765 AAGATGATGACGATGGATCC 59 6594861 6594882 GTCTGATTCAGAGACTTTAGGT 59 NA Mus musculus 50 March11 ENSMUSG00000022269 ENSMUST00000049988 2 1 1 60 15 26240785 26240806 TCTTCTAAAGTGGATCAGTGAG 59 26240825 26240845 GTATCTATAACAGCACAGCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Atad2 ENSMUSG00000022360 ENSMUST00000038194 1 1 2 80 15 57952609 57954021 TCCACTGGAAAGTAAACCTC 59 57952548 57952566 AATCTTGGTCTTGCAGGAG 59 NA Mus musculus 50 Ddef1 ENSMUSG00000022377 ENSMUST00000110114 2 1 3 97 15 63934024 63951527 CGGGAAAGGTAATGATGTG 58 63931133 63931151 CAGTCTTAGCAGAACTGGT 58 NA Mus musculus 50 Ppara ENSMUSG00000022383 ENSMUST00000109423,ENSMUST00000109422,ENSMUST00000057979 2 3 3 116 15 85619443 85619461 TGTACGACAAGTGTGATCG 59 85619541 85621281 CAAAGCGAATTGCATTGTG 58 NA Mus musculus 50 Zcrb1 ENSMUSG00000022635 ENSMUST00000076070 2 1 1 106 15 93221949 93221967 GGAAGAGTAAAGGTGTTGC 58 93221566 93221584 CGCCTTTATCACTCTACCA 58 NA DesignNoJunction Mus musculus 50 Bbx ENSMUSG00000022641 ENSMUST00000066037 2 1 7 82 16 50247956 50262536 CACCAGAGATATCTTCAAGGAC 59 50247895 50247914 CTCTGCAAACTGAAACAAGG 59 NA Mus musculus 50 Prss7 ENSMUSG00000022857 ENSMUST00000023566,ENSMUST00000060402 1 2 2 96 16 79073437 79073456 TAAGCTAACAACCAGCAGTC 59 79062497 79071648 CTCTATTGAGACATGGCCTG 59 NA Mus musculus 50 Cxadr ENSMUSG00000022865 ENSMUST00000114229 2 1 2 82 16 78336543 78336562 AGACGCAGTATAACCAAGTC 59 78336607 78359464 GTACTTGAACTTAGCGGGT 59 NA Mus musculus 50 Enah ENSMUSG00000022995 ENSMUST00000078719,ENSMUST00000111025,ENSMUST00000111024,ENSMUST00000111030 1 4 4 99 1 183853965 183860820 AATCCAGAGAAGGCAACTG 59 183853884 183853903 CTCTCGTTCTAGTCGTTCTC 59 NA Mus musculus 50 Spats1 ENSMUSG00000023935 ENSMUST00000024730 1 1 3 115 17 45586488 45591047 TTCTCACTTCTGCCTTTCTG 59 45586392 45586411 AAGAAACCATGTAGGAAGGG 59 NA Mus musculus 50 Slc29a1 ENSMUSG00000023942 ENSMUST00000051574,ENSMUST00000064889,ENSMUST00000097317 1 3 3 80 17 45726209 45726227 TTGGCTACTTCATCACAGC 59 45726014 45726165 GATAGAATTCCGTCCGAGG 59 NA Mus musculus 50 Stk38 ENSMUSG00000024006 ENSMUST00000009138 3 1 2 80 17 29110036 29110056 ATCAAGAGCATCGATGATACC 59 29109608 29109994 ACTACTTGTGGTCACTGTG 59 NA Mus musculus 50 Epb4.1l3 ENSMUSG00000024044 ENSMUST00000024843,ENSMUST00000112680,ENSMUST00000080208,ENSMUST00000112679 3 4 6 114 17 69624135 69624153 CCTTAACAAACGAGTGGGA 59 69624231 69633238 GAAGACTGTTTGGTCTCCT 58 NA Mus musculus 50 Srbd1 ENSMUSG00000024135 ENSMUST00000095187 2 1 3 83 17 86450473 86450493 GTGTTCAAGATCCATTAGCTG 59 86403278 86450428 TCTGGGATACATCATGCTG 58 NA Mus musculus 50 Fkbp5 ENSMUSG00000024222 ENSMUST00000079413,ENSMUST00000114792,ENSMUST00000062167 3 3 3 82 17 28566213 28566231 GAATATGCTTATGGCTCGG 58 28565395 28566168 AAATCAAGGAGCTCAATCTC 57 NA Mus musculus 50 Epc1 ENSMUSG00000024240 ENSMUST00000115870,ENSMUST00000028100 2 2 3 81 18 6450342 6450360 GAGGAAGAGAATGACCCTG 59 6450200 6450298 TTTGGTCTAAATGAGGAGCA 58 NA Mus musculus 50 Thumpd2 ENSMUSG00000024246 ENSMUST00000025093 3 1 2 162 17 81426303 81431982 GAAATGGAAAGAGTGCTGC 59 81426159 81426177 CAGTTCTGTCAGGATTCGA 59 NA Mus musculus 50 Myo1f ENSMUSG00000024300 ENSMUST00000087605 1 1 2 133 17 33738995 33739013 TCTCACTATCAGCATTGGG 58 33739545 33741210 GATTCAAACCTCTGGGAGG 59 NA Mus musculus 50 Nr3c1 ENSMUSG00000024431 ENSMUST00000115567,ENSMUST00000115571,ENSMUST00000025300 3 3 5 163 18 39588403 39588421 CCAGATGTGAGTTCTCCTC 59 39584141 39588276 TAATTGTGCTGTCCTTCCA 58 NA Mus musculus 50 Diap1 ENSMUSG00000024456 ENSMUST00000115634,ENSMUST00000115631,ENSMUST00000025337 2 3 5 80 18 38015247 38015374 TTTGTAAGCTTCGAGACAC 57 38015185 38015205 GGTCATTCTCACATAACTCAG 58 NA Mus musculus 50 Spire1 ENSMUSG00000024533 ENSMUST00000045105 3 1 4 81 18 67663133 67663151 TGAGAAGGAAACACCTACG 58 67660881 67663091 GGTTATCCTAGGAACAAGAGAC 59 NA Mus musculus 50 Rtn3 ENSMUSG00000024758 ENSMUST00000025667,ENSMUST00000065304,ENSMUST00000088171,ENSMUST00000088169 2 4 4 114 19 7509507 7509525 GGTCTCTTACCTCATCCTG 58 7507071 7509429 CAAGTAGGCCTTGAATGGA 59 NA Mus musculus 50 Sf1 ENSMUSG00000024949 ENSMUST00000113489,ENSMUST00000113487,ENSMUST00000113485,ENSMUST00000076351 3 4 4 83 19 6365718 6365736 AGAAGACAGTGATTCCAGG 58 6365781 6368372 GTAGTTGCACTATGTAAGCTC 58 NA Nonspecific Mus musculus 50 Rcor2 ENSMUSG00000024968 ENSMUST00000025920,ENSMUST00000113369,ENSMUST00000066646 3 3 3 80 19 7347599 7347617 ATGAAGCAGACCAATAGCA 58 7347661 7348334 CTTGGTATTAGCCTCAGGG 59 NA Mus musculus 50 Habp2 ENSMUSG00000025075 ENSMUST00000078284 1 1 2 160 19 56381363 56383334 TGAAGACGATGATCCATGC 59 56384534 56384552 AATCACCATGGACACATGG 59 NA Mus musculus 50 Wdr45l ENSMUSG00000025173 ENSMUST00000026173,ENSMUST00000106109 1 2 3 98 11 121189768 121190114 AGTCATTGCTATCTGTGCA 58 121189688 121189706 GTCATCTCCAGGAACTGTG 59 NA Mus musculus 50 Hdhd2 ENSMUSG00000025421 ENSMUST00000097522,ENSMUST00000026485 1 2 4 93 18 77203996 77205890 TGATAGGAGACGATTGCAG 58 77209350 77209368 TCTGCTGCTTTGTATTTCC 58 NA Mus musculus 50 Nnt ENSMUSG00000025453 ENSMUST00000109205 1 1 6 85 13 120168195 120168441 TGTTTGTTCAGAGACTCCT 58 120168128 120168147 CTATTTCCAGTGAATGTTGC 57 NA Mus musculus 50 Tm9sf2 ENSMUSG00000025544 ENSMUST00000100295 2 1 2 80 14 122551278 122551297 ACTTTCACCTATGTGCAGAG 59 122554591 122554612 TATCAGGAAGAACAGCTGTG 59 NA Mus musculus 50 Arhgef9 ENSMUSG00000025656 ENSMUST00000113876,ENSMUST00000113885,ENSMUST00000113883,ENSMUST00000113882,ENSMUST00000113878,ENSMUST00000113881,ENSMUST00000113880,ENSMUST00000113873 1 8 10 117 X 92247484 92250291 AAACAGAAAGGTGTCAACTC 58 92247386 92247404 CAAACACTTGAGACTGAGC 58 NA Nonspecific Mus musculus 50 Pdgfa ENSMUSG00000025856 ENSMUST00000110897,ENSMUST00000110896,ENSMUST00000076095 3 3 4 104 5 139455174 139455192 AATTGAAAGAGGTCCAGGT 58 139453170 139455106 CTCACCTCACATCTGTCTC 59 NA Mus musculus 50 Crygc ENSMUSG00000025952 ENSMUST00000114064,ENSMUST00000027089 3 2 2 110 1 65119787 65119805 AGAGTACCCTGACTACCAG 59 65118408 65118427 TCTTCTTTCTCATACAGCCG 59 NA DesignNoJunction Mus musculus 50 Eif4e2 ENSMUSG00000026254 ENSMUST00000113233,ENSMUST00000113232,ENSMUST00000027471,ENSMUST00000076362,ENSMUST00000113236,ENSMUST00000113231 3 6 6 90 1 89122497 89122515 AATCTCATCCTGGCTATGC 59 89122569 89122681 TAATGTCCTCCTGAAAGCG 59 NA Nonspecific Mus musculus 50 Serpinb8 ENSMUSG00000026315 ENSMUST00000112706,ENSMUST00000000514 3 2 2 82 1 109495600 109499380 TGTGATTTCCTTTCGACCT 58 109499425 109499444 GTGTCTTTAGCAAAGGACAG 58 NA Mus musculus 50 Fcgr2b ENSMUSG00000026656 ENSMUST00000027966 2 1 3 102 1 172893526 172893544 AGTAGGTGAGTACAGACAG 57 172891351 172893460 ATCAGGAGGATTGTATGGG 58 NA Mus musculus 50 Tfpi ENSMUSG00000027082 ENSMUST00000111722,ENSMUST00000111711 2 2 8 85 2 84284269 84284907 TGAGAATCCAGTGAATGAGG 59 84284203 84284224 CGATGTTATTTACAGTACTGCG 59 NA Mus musculus 50 Mal ENSMUSG00000027375 ENSMUST00000028854,ENSMUST00000028853 3 2 2 72 2 127464345 127464366 GGCTTTACTTACAAGCATTACC 59 127460760 127460778 CGTAGATCAGAGTGACCAC 59 NA DesignNoJunction Mus musculus 50 0610011L14Rik ENSMUSG00000027628 ENSMUST00000109570,ENSMUST00000029158 1 2 2 107 2 156381745 156381763 TTTGTGGACATTGTCTCCC 59 156392642 156392660 CTCAGCTTTCTTCCTCAGG 59 NA DesignNoJunction Mus musculus 50 Tsc22d2 ENSMUSG00000027806 ENSMUST00000099090 2 1 2 95 3 58232211 58263260 CTCTGGGATAGTGCATCTG 59 58263943 58263962 TACTGCATACATCAAATGGC 58 NA Mus musculus 50 Kcnab1 ENSMUSG00000027827 ENSMUST00000049230,ENSMUST00000029413 1 2 2 91 3 64913914 65070431 GGAATCTTGGGAAATCAGGA 59 65099215 65101599 TTCAGCAACCTCATCTGAG 59 NA Mus musculus 50 Rragd ENSMUSG00000028278 ENSMUST00000029946,ENSMUST00000098190 3 2 3 80 4 33083005 33083024 ACCCTACCTTTGACTATGAG 58 33083067 33091138 CCATATAGTCATCCTGGGA 57 NA Mus musculus 50 Tmeff1 ENSMUSG00000028347 ENSMUST00000030032,ENSMUST00000107702 3 2 3 154 4 48627842 48630111 ATCTGGAGAAGGAGAGGAG 59 48649737 48649755 CAGGGTTAAAGCTGTACCC 59 NA Mus musculus 50 Nfia ENSMUSG00000028565 ENSMUST00000097969,ENSMUST00000107062,ENSMUST00000075448,ENSMUST00000107061 3 4 7 109 4 97450295 97623073 CATGCAGCAGATTCAAGTC 59 97667098 97667116 GATGTGACAAAGCTGTCCT 59 NA Nonspecific Mus musculus 50 Dmbx1 ENSMUSG00000028707 ENSMUST00000064806 1 1 2 130 4 115596355 115596373 ACGCTATGAACTCACTCAG 59 115593321 115596261 AAATGTACAGCCAGCTAGG 59 NA Mus musculus 50 Cyp4a31 ENSMUSG00000028712 ENSMUST00000030480 2 1 2 132 4 115243742 115243856 CTCTATCACCTGGGATCAC 58 115243952 115243970 ACATCCATCAGGAAAGGTG 59 NA Mus musculus 50 Trp73 ENSMUSG00000029026 ENSMUST00000105644,ENSMUST00000030892,ENSMUST00000105641 2 3 7 134 4 153478525 153478936 GAGTTCTCTAGAGCCAGAC 58 153455661 153455679 CTGAGCAAATTGAACTGGG 59 NA Mus musculus 50 Ttll10 ENSMUSG00000029074 ENSMUST00000051509,ENSMUST00000105577,ENSMUST00000097731,ENSMUST00000030951 1 4 4 80 4 155421307 155421469 GGAGCATCAATAATCAGCA 57 155421245 155421263 TAGCTTGTAGTCCTCACAG 57 NA Mus musculus 50 Wsb2 ENSMUSG00000029364 ENSMUST00000031309,ENSMUST00000111959 1 2 2 128 5 117824215 117825788 AGAAGTCGGTCTTTCTGTG 59 117825880 117825898 TGTCATACGAAGCTGTGAC 59 NA Mus musculus 50 Ddx55 ENSMUSG00000029389 ENSMUST00000111438 1 1 2 112 5 125016496 125016864 AACCAGAAAGAGATGAGCC 59 125016940 125016958 GACACAAAGGCTTTCATGC 59 NA Mus musculus 50 Tmem116 ENSMUSG00000029452 ENSMUST00000111795,ENSMUST00000094357 1 2 6 81 5 121944224 121944242 CTGATCATGAAGCTGACAG 57 121944284 121973363 CATGATGAAGTCTGTATCTCTG 58 NA Mus musculus 50 St7 ENSMUSG00000029534 ENSMUST00000115419,ENSMUST00000052113,ENSMUST00000081635,ENSMUST00000000674,ENSMUST00000077080,ENSMUST00000053148,ENSMUST00000115417 1 7 7 166 6 17872077 17872095 ATCTTGCACACTGGAAGAG 59 17880851 17884129 TTCATGGAAAGAGGGAAGC 59 NA Mus musculus 50 Slc46a3 ENSMUSG00000029650 ENSMUST00000031655 2 1 1 113 5 148705449 148705467 ATAGCAATGGCTCTGAGTG 59 148698363 148698381 TTAAGGCACTCATTTCCAC 57 NA DesignNoJunction Mus musculus 50 Exoc4 ENSMUSG00000029763 ENSMUST00000012723,ENSMUST00000090381,ENSMUST00000069979,ENSMUST00000115080,ENSMUST00000052266 1 5 5 80 6 33246854 33246875 GCCATCTGTATATCAAATCCAC 58 33246915 33255301 GATCTTTGCCATGAGAACTC 58 NA Mus musculus 50 Zc3hav1 ENSMUSG00000029826 ENSMUST00000114900,ENSMUST00000039710,ENSMUST00000031850 1 3 4 91 6 38281851 38282149 TGCTGAGTATTCCCTATGC 58 38281778 38281797 TGTACAGATGATCCAGACAG 58 NA Mus musculus 50 Anxa4 ENSMUSG00000029994 ENSMUST00000113675,ENSMUST00000001187 3 2 3 97 6 86693162 86694628 TTGGCTATAGTGAAGTGCA 58 86691924 86691942 ATGAGGGTGTTGTCATCAG 59 NA Mus musculus 50 Ptms ENSMUSG00000030122 ENSMUST00000032216,ENSMUST00000112444 2 2 2 156 6 124864728 124864951 GAAAGAAGTAGTGGAGGAGG 59 124864426 124864444 CTCCTCTTCAGCAGTTCTC 59 NA Mus musculus 50 Erc1 ENSMUSG00000030172 ENSMUST00000032279 1 1 4 81 6 119663751 119663770 TGTACAGATAACTGCAGAGC 59 119644741 119663708 CTCTTCCACCTGTTTCTCAG 59 NA Mus musculus 50 Plcz1 ENSMUSG00000030230 ENSMUST00000032355 2 1 2 192 6 139971804 139971822 TGTCAATTGAAGGTTTCGC 58 139968972 139971650 CACAGGTGTCTTACATATCCC 59 NA Mus musculus 50 Plekha5 ENSMUSG00000030231 ENSMUST00000087622 3 1 3 90 6 140512126 140512144 CAATGATTGAGAACTCGGC 58 140517392 140517884 TCTTGTGACAGACAATAGAGAC 59 NA Mus musculus 50 Mtmr14 ENSMUSG00000030269 ENSMUST00000113146,ENSMUST00000032403,ENSMUST00000042548 3 3 3 80 6 113207019 113207037 TAACCTCCTCTGAGAAGGT 58 113207080 113210590 ATTCACAACCTGGATATGGA 58 NA Mus musculus 50 D030011O10Rik ENSMUSG00000030313 ENSMUST00000111557 1 1 2 80 6 148946945 148948452 GACTTCGTAGAGAAAGCAG 57 148946883 148946902 TTTCTGAATGAGCACATCAC 58 NA Mus musculus 50 Plin ENSMUSG00000030546 ENSMUST00000032762 3 1 1 73 7 86867497 86867515 CACTGTGGTACACTATGTG 57 86866594 86866613 TATCGATGTCTCGGAATTCG 59 NA DesignNoJunction Mus musculus 50 Rab38 ENSMUSG00000030559 ENSMUST00000032778,ENSMUST00000107256 3 2 2 73 7 95599250 95599268 ATGGTTTGAAACATCAGCC 58 95639151 95639169 CAAGTATGTGCTTGACCAG 58 NA DesignNoJunction Mus musculus 50 Fgfr2 ENSMUSG00000030849 ENSMUST00000033138,ENSMUST00000106209,ENSMUST00000068807,ENSMUST00000106208 3 4 4 82 7 137307628 137311227 CAACCAATGAGGAATACTTGG 58 137307566 137307584 AGAACAAGAGCTCCTTGTG 59 NA Mus musculus 50 Rbmx ENSMUSG00000031134 ENSMUST00000098470,ENSMUST00000033470,ENSMUST00000114730,ENSMUST00000114726 3 4 4 91 X 54644509 54644527 TAAGTCAAGAGGATTCGCT 57 54643400 54644454 TCCCATCTAAGGACTTTCC 57 NA Mus musculus 50 Tbx22 ENSMUSG00000031241 ENSMUST00000087746 3 1 4 97 X 104873033 104873051 TATCCAAGTGGAGCTTCAG 58 104873112 104875460 TGTGATACACATACCTGCC 59 NA Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112403,ENSMUST00000112401,ENSMUST00000078682,ENSMUST00000112398 1 4 10 143 X 156896795 156899282 CTACTCCAATGATGCTGCT 59 156903541 156903561 GAGTCATTGCAAAGAGATGAC 59 NA Mus musculus 50 Zfp185 ENSMUSG00000031351 ENSMUST00000114546,ENSMUST00000033718 2 2 3 156 X 70246397 70246751 AAGAAGACCACTAGTCCGA 59 70248713 70248731 CAATCTTCTCGGTTGTCGA 59 NA Mus musculus 50 Bcar1 ENSMUSG00000031955 ENSMUST00000109137,ENSMUST00000034433 1 2 2 80 8 114239229 114239247 TGTTGGATGTGTATGACGT 58 114238321 114239185 GAGGAACATCATACACCGA 58 NA Mus musculus 50 Pde4a ENSMUSG00000032177 ENSMUST00000039413,ENSMUST00000069577,ENSMUST00000115458,ENSMUST00000003395 3 4 4 93 9 21005850 21007649 CTCTTAGCACAAGAACTGGA 59 21007705 21007723 TGATACAGCTGAGTGAACG 59 NA Mus musculus 50 Lrrc1 ENSMUSG00000032352 ENSMUST00000049755,ENSMUST00000113421,ENSMUST00000113419 1 3 3 80 9 77316408 77316429 CAGAACTTAACGTGTCTTTCTG 59 77305919 77316369 AGCCAGGTTATAGAGATTTCC 58 NA Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113690,ENSMUST00000113693,ENSMUST00000113689 2 3 16 118 9 66879277 66879295 AGAGGAGATCAAGGTTCTC 57 66872361 66878845 GGTAGAGTTGATCTTCTAAGTC 57 NA Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113690,ENSMUST00000113693,ENSMUST00000113689 1 3 16 84 9 66872361 66878845 GACTTAGAAGATCAACTCTACC 57 66872298 66872316 TTTAATCCTCATTCAGGGC 57 NA Mus musculus 50 Arpp21 ENSMUSG00000032503 ENSMUST00000111872,ENSMUST00000062476,ENSMUST00000035085,ENSMUST00000070218,ENSMUST00000084898,ENSMUST00000027590 1 6 6 98 9 112086079 112086781 AAATCCAAGTCAGGAGCAG 59 112085999 112086017 CTGATCCTGGTGACTTTCC 59 NA Mus musculus 50 Trf ENSMUSG00000032554 ENSMUST00000112645,ENSMUST00000035158 2 2 2 82 9 103122187 103122205 CATGACTTTGGATGGAGGA 58 103121577 103122143 TAGAGCTCTCGTAGTACTCTG 59 NA Mus musculus 50 Oas2 ENSMUSG00000032690 ENSMUST00000053909,ENSMUST00000081491 1 2 2 80 5 121186058 121186077 AGAAACTTCATTCAAACCCG 58 121185219 121186018 CCTTTCATACTGTTTGTACCAG 58 NA Mus musculus 50 Ccdc88a ENSMUSG00000032740 ENSMUST00000101427 3 1 2 94 11 29397418 29398419 GTTCCATGTCCATGAATGAC 58 29398475 29398494 AATATCATCAGGGACCTCCA 59 NA Mus musculus 50 Ctdspl2 ENSMUSG00000033411 ENSMUST00000036647,ENSMUST00000110581,ENSMUST00000110578,ENSMUST00000110574,ENSMUST00000110572 2 5 7 139 2 121832717 121833468 GCCTATCAGCTTTCTAATGGA 59 121836314 121836333 AATCTGTCTCTGATGTGAGG 58 NA Mus musculus 50 Egr3 ENSMUSG00000033730 ENSMUST00000035908 3 1 1 60 14 70478800 70478818 CTACTTGGGAAAGTTCGCT 59 70478842 70478860 GCTAATGATGTTGTCCTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Clcnka ENSMUSG00000033770 ENSMUST00000105790,ENSMUST00000042617 2 2 2 83 4 140948737 140950342 TCAACAGTGAACAGGAGAC 59 140948672 140948690 AGAAGATTTCAGGCAGGTC 59 NA Mus musculus 50 Gria2 ENSMUSG00000033981 ENSMUST00000107746,ENSMUST00000075316 2 2 3 111 3 80496291 80496309 ATGAGTACATCGAGCAGAG 58 80495348 80496216 ACCGCATTTCTTAATGAGG 57 NA Mus musculus 50 5830443L24Rik ENSMUSG00000034438 ENSMUST00000072890 1 1 3 167 5 105459988 105460006 CTTCACCAAATCCTGATGG 58 105457609 105459857 GATTGTAACCTGGGATCAG 57 NA Mus musculus 50 Diap2 ENSMUSG00000034480 ENSMUST00000037854,ENSMUST00000096329 1 2 4 94 X 126360471 126437441 AAGTAAAGTTCTGGGTGGC 59 126437499 126437517 CATCTGAGATGCCAGATCG 59 NA Mus musculus 50 Gjc1 ENSMUSG00000034520 ENSMUST00000092567,ENSMUST00000068933,ENSMUST00000107075 2 3 3 83 11 102664155 102664173 CAGGAGTTCTGGTGAACAG 59 102662445 102662463 GTTGTGGATCTCCTCTAGC 59 NA DesignNoJunction, InUTR Mus musculus 50 Gjc1 ENSMUSG00000034520 ENSMUST00000092567,ENSMUST00000068933,ENSMUST00000107075 3 3 3 87 11 102664160 102664178 GGTAACAGGAGTTCTGGTG 59 102662446 102662464 TTGTGGATCTCCTCTAGCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Zfyve9 ENSMUSG00000034557 ENSMUST00000106657,ENSMUST00000106658,ENSMUST00000106660,ENSMUST00000042185 1 4 4 80 4 108361801 108361820 AGTGCAATGAACCTTATTCC 58 108357623 108361758 TTCCACAGCATAATCTCCT 57 NA Mus musculus 50 Nrip3 ENSMUSG00000034825 ENSMUST00000041460,ENSMUST00000033331 3 2 2 80 7 116907127 116908987 AGATTGGGACTAAAGGACC 58 116907065 116907083 AACTACTTTGAGATGCCGT 58 NA Mus musculus 50 Ttc21b ENSMUSG00000034848 ENSMUST00000102718,ENSMUST00000090886 3 2 2 87 2 66035874 66035892 CAGTTAGCAGTGAGGACAG 59 66029825 66035728 CTGGGATATGATCCTTCTCG 59 NA Mus musculus 50 Sidt2 ENSMUSG00000034908 ENSMUST00000038488 3 1 2 145 9 45753866 45754845 TCTCCTACAGTTACCAGGAC 59 45753434 45753758 GAGGTATTGCTTGGTTCGA 59 NA Mus musculus 50 Dopey1 ENSMUSG00000034973 ENSMUST00000098498 2 1 3 80 9 86400058 86400078 GATTCGTCTGAGTTACAACTG 58 86400118 86401122 AATATAGGTCTCCAAGGAGAC 58 NA Mus musculus 50 Ccdc98 ENSMUSG00000035234 ENSMUST00000044535 2 1 2 100 5 101238584 101238604 TATGCTGCTGTACAAGAAGAG 59 101235901 101236903 GCATATACTAGGGCAGCTC 59 NA Mus musculus 50 Capn5 ENSMUSG00000035547 ENSMUST00000040971,ENSMUST00000107112 3 2 2 100 7 105277937 105279708 GAATTCTGGATGACCTTTGAG 58 105277857 105277875 TCCCATGTCTTATGGATGC 59 NA Mus musculus 50 Acaa1a ENSMUSG00000036138 ENSMUST00000039784,ENSMUST00000063335 1 2 2 72 9 119253602 119253620 CTTATGACATTGGCATGGC 59 119255617 119255635 GAGATATTCCCAGGGTTCC 58 NA DesignNoJunction Mus musculus 50 C330002I19Rik ENSMUSG00000036333 ENSMUST00000066652,ENSMUST00000110935 3 2 4 81 12 25725367 25725385 GTTCCCAACATCTCATCTC 57 25725430 25726124 TCCTTGATTACCTCTAGGC 57 NA Mus musculus 50 Arsi ENSMUSG00000036412 ENSMUST00000040359 1 1 1 60 18 61076385 61076403 CTCTTTCTCTATGTGGCCT 58 61076427 61076445 GGTATTCTCGAGGTGACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bcorl1 ENSMUSG00000036959 ENSMUST00000114972,ENSMUST00000037596 2 2 2 80 X 45746466 45753745 CTTTCTCAGTGATCACCTC 57 45753789 45753807 GAACTGCTGTAGAAATCCC 57 NA Mus musculus 50 Bank1 ENSMUSG00000037922 ENSMUST00000041577 3 1 2 80 3 135917883 135917901 TCCTAGCATCTCTGAGACC 59 135910719 135917841 ATATCTCACCAGGTTTCTCAC 59 NA Mus musculus 50 Mphosph9 ENSMUSG00000038126 ENSMUST00000031344 2 1 2 80 5 124740902 124740920 AATGCTTACAAGCTCTCAG 57 124736419 124740860 GTACTCTCCTAAGAGATCCTG 58 NA Mus musculus 50 Slc43a2 ENSMUSG00000038178 ENSMUST00000108433,ENSMUST00000042561,ENSMUST00000100839 1 3 3 80 11 75359264 75359282 GTGCTCATCTTTATCGCCT 59 75359325 75374412 CATATTGGGCAGTGTTAACG 59 NA Mus musculus 50 Lrrc56 ENSMUSG00000038637 ENSMUST00000084446,ENSMUST00000106028 3 2 4 102 7 148393141 148393739 CAGTACCAGTCCTCTTCTC 58 148393805 148393823 GTCTTCCTGTTCTACAGGA 57 NA Mus musculus 50 Ythdf1 ENSMUSG00000038848 ENSMUST00000108876,ENSMUST00000037299 2 2 2 80 2 180653892 180653910 GTTCTTTGCATCAGAAGGA 57 180646903 180653848 AACTGTTACTCGGATTGGA 58 NA Mus musculus 50 Whrn ENSMUSG00000039137 ENSMUST00000102867,ENSMUST00000107393,ENSMUST00000063650,ENSMUST00000107388,ENSMUST00000095037 3 5 11 85 4 63092941 63092959 TTCCATGGTTTCCTACAGC 59 63080518 63092893 CTAATGTATTCCTGGCCGAG 59 NA Mus musculus 50 Coro7 ENSMUSG00000039637 ENSMUST00000038552 2 1 2 160 16 4633834 4634313 GACACAGACCTAAGTGAGG 59 4633409 4633427 TGGCGAAATTTAGAACTGG 58 NA Mus musculus 50 Fbxl5 ENSMUSG00000039753 ENSMUST00000114047,ENSMUST00000047857,ENSMUST00000087465 3 3 3 80 5 44152085 44154065 GATGAATCTGAAGAGTCTGC 58 44152024 44152043 AATTAAGCCATGGAGTACAC 57 NA Mus musculus 50 Sdro ENSMUSG00000040127 ENSMUST00000047134 1 1 1 60 10 127339451 127339470 GCCTTCTCTGATAGCATCAG 59 127340656 127340674 CAATGATGCTGACCTTCAC 58 NA DesignNoJunction Mus musculus 50 Timd2 ENSMUSG00000040413 ENSMUST00000109225,ENSMUST00000055102 3 2 2 82 11 46489843 46490720 ATGGTTATCACCAGGTACG 58 46484488 46484508 GCTCCAATCTTAGAGATAGGG 59 NA Mus musculus 50 MGI:2388655 ENSMUSG00000040865 ENSMUST00000046020,ENSMUST00000097718 2 2 2 85 1 63125625 63132252 TCCTCATTTAGGATTGGATTGG 59 63125561 63125579 ACCATGCGACTTGATATGG 59 NA Mus musculus 50 Rcc2 ENSMUSG00000040945 ENSMUST00000071169,ENSMUST00000038893 1 2 2 81 4 140268582 140269326 CTGCTCAGATAATGTACAACG 58 140269369 140269387 CCTTTACAGTCCATCAGCA 59 NA Mus musculus 50 Uspl1 ENSMUSG00000041264 ENSMUST00000100410,ENSMUST00000050472 1 2 2 80 5 150000040 150005426 GGATCTTCAGTGCATTTATCC 58 150005468 150005486 GGAGTGGGACAATCTTCTG 59 NA Mus musculus 50 Fhdc1 ENSMUSG00000041842 ENSMUST00000091002,ENSMUST00000107689,ENSMUST00000107688 1 3 4 89 3 84278121 84278139 CAAGAAGACACCTCCAAGG 59 84269394 84278068 CAAGACGGTAACCTCTTCC 59 NA Mus musculus 50 Pbrm1 ENSMUSG00000042323 ENSMUST00000112095,ENSMUST00000112094,ENSMUST00000052239,ENSMUST00000112080 3 4 11 120 14 31920385 31920404 ATGAGAGCTGTGATTAAAGC 57 31920485 31927043 CCATCATGCCTTCATATTCTG 58 NA Mus musculus 50 Zfp410 ENSMUSG00000042472 ENSMUST00000045931 2 1 2 83 12 85673961 85678570 GGTAGTTCACTCAGGTGAG 59 85678616 85678635 ATATGCACATTCCTACTCCC 58 NA Mus musculus 50 4933432B09Rik ENSMUSG00000042564 ENSMUST00000046816 3 1 3 107 15 79467193 79470448 GAGGCACTCTTAAAGAGCT 58 79467104 79467122 CTTACCCTTCAGAAGTCGA 58 NA Mus musculus 50 Pigy ENSMUSG00000043162 ENSMUST00000053386 2 1 1 60 6 57639847 57639866 AGCATCGACAAATGAATTGG 59 57639806 57639826 CCCATCAATGATTGGATATGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 E430028B21Rik ENSMUSG00000043702 ENSMUST00000052932 1 1 1 60 14 27485873 27485893 CTAATACCCATCTCTACTGGC 59 27485423 27485442 ACTTCCATTTGAATGAGACG 58 NA DesignNoJunction Mus musculus 50 Tmem20 ENSMUSG00000044026 ENSMUST00000054098 1 1 1 89 19 38475038 38475056 TAGAGATCAGTGCGTTTCG 59 38477134 38477152 CTTTGGGACCTATGAACCC 59 NA DesignNoJunction Mus musculus 50 Fmn1 ENSMUSG00000044042 ENSMUST00000102547 1 1 6 83 2 113436534 113439729 GCGATACTATGATCAGTGCA 59 113439773 113439793 GCAATGTGGAAGTATAAGCTG 59 NA Mus musculus 50 Shroom2 ENSMUSG00000045180 ENSMUST00000101141,ENSMUST00000062317 2 2 2 81 X 149051892 149053456 TCACAGAGGACAAGAAACAG 59 149051830 149051849 GCTGATGTGCTGTAATAGGT 59 NA Mus musculus 50 Wnk1 ENSMUSG00000045962 ENSMUST00000060043,ENSMUST00000088644,ENSMUST00000088646 2 3 4 81 6 119919307 119919326 TAGAACCTGAAGAACCTGAG 58 119918672 119919263 GTTCCATCAGACAACACAG 58 NA Mus musculus 50 Pilra ENSMUSG00000046245 ENSMUST00000058897,ENSMUST00000110980 3 2 2 80 5 138265245 138265264 ACCAGTGAGAAACATGAGAG 59 138264811 138264989 CACGATGTTATTATCCTTGGG 58 NA Mus musculus 50 Slitrk4 ENSMUSG00000046699 ENSMUST00000069926 2 1 2 150 X 61527247 61527265 ATAAAGCTGCTCAAAGACC 57 61526206 61526224 GACACAATCAGAAAGAGCC 58 NA DesignNoJunction, InUTR Mus musculus 50 Mapk10 ENSMUSG00000046709 ENSMUST00000112847,ENSMUST00000112848,ENSMUST00000060871,ENSMUST00000112846,ENSMUST00000100980 3 5 7 85 5 103418696 103418714 ATGATGACTCCGTATGTGG 58 103416284 103418647 CATATGTCCACGTTCTCCT 58 NA Mus musculus 50 Ccdc108 ENSMUSG00000047021 ENSMUST00000094844 1 1 2 80 1 74969636 74971381 TTCGCCGTTTATAAGGTCC 59 74969574 74969592 AACCTTCAGACACCATGAC 59 NA Mus musculus 50 Gphn ENSMUSG00000047454 ENSMUST00000052472 2 1 2 82 12 79593290 79605614 CTGCAAAGATTCCAGACTC 58 79605660 79605678 TGAAGGAGTAGTGCTAAGG 57 NA Mus musculus 50 Olfr67 ENSMUSG00000047535 ENSMUST00000062377,ENSMUST00000106876 1 2 2 60 7 110936380 110936398 CCATCTGTTACCCACTGAG 59 110936338 110936356 CCAATCTTGCCAATGACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bola2 ENSMUSG00000047721 ENSMUST00000106369 1 1 2 266 7 133839544 133839562 TGTGGTTATGGAACTCAGC 59 133839875 133839893 TTTGGGAATGAGTTGGTCC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Odz4 ENSMUSG00000048078 ENSMUST00000107162,ENSMUST00000084996 2 2 6 114 7 104001078 104011963 CATCCTGGAGATGAGTCAC 59 104012041 104012059 GGACTTGACCTTGAAGACC 59 NA Mus musculus 50 4930546H06Rik ENSMUSG00000048159 ENSMUST00000012759 2 1 1 100 17 17974537 17974633 TCTCGATTGTCCAGTTCAG 59 17974695 17974715 AATAAGTGATCTCCGACTCTG 59 NA Mus musculus 50 Igf2 ENSMUSG00000048583 ENSMUST00000000033,ENSMUST00000053222,ENSMUST00000105936,ENSMUST00000097936,ENSMUST00000105935 2 5 5 113 7 149840258 149840276 CTCCTGGAGACATACTGTG 58 149839916 149839934 ATATTGGAAGAACTTGCCC 57 NA DesignNoJunction Mus musculus 50 Tpcn2 ENSMUSG00000048677 ENSMUST00000058022 3 1 1 81 7 152455731 152458195 TTGGTGAGAAGGATGAAGC 59 152455668 152455686 ACTAGGAGTGAGGTCAGTG 59 NA Mus musculus 50 Efna5 ENSMUSG00000048915 ENSMUST00000076840 2 1 2 109 17 62956806 62962676 TAGAACCAGCAGATGACAC 58 62956715 62956733 GAGGAACAGTAGGATTGCC 59 NA Mus musculus 50 Armcx3 ENSMUSG00000049047 ENSMUST00000086880,ENSMUST00000081834,ENSMUST00000086884 3 3 3 261 X 131292646 131292664 CACAGGAAAGGAAGAAGGG 59 131293187 131293206 GTAAATGCAATAGCAGGCTC 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Glp2r ENSMUSG00000049928 ENSMUST00000021289,ENSMUST00000108679 1 2 3 80 11 67555849 67560220 CTTGTTCCTTCGATTTCTGC 59 67555788 67555806 CAACCACAAGTGATTGGTG 59 NA Mus musculus 50 Lgr4 ENSMUSG00000050199 ENSMUST00000046548 2 1 2 80 2 109810907 109829868 TTTCTAGAGGAGCTACAACTG 58 109829909 109829928 TTTGAGTTCTTTCAACCCAG 58 NA Mus musculus 50 Sstr5 ENSMUSG00000050824 ENSMUST00000051864 1 1 1 91 17 25631980 25631998 AGGCTCCTCTAACATTGTC 58 25629169 25629187 AGGTGTGGAAGTCAAAGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Apon ENSMUSG00000051716 ENSMUST00000060782,ENSMUST00000105239 3 2 2 60 10 127692101 127692122 GGAAAGTATGAATGAAGTAGCC 58 127692142 127692161 CTTGGCGTCTTTAAGTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1110012J17Rik ENSMUSG00000052105 ENSMUST00000086693,ENSMUST00000112716,ENSMUST00000097291,ENSMUST00000036760 3 4 4 156 17 66717792 66727202 CAACCTAGAGATGGAGGAG 58 66717654 66717672 GAAGATGTTCTGCTTCAGG 58 NA Mus musculus 50 Robo2 ENSMUSG00000052516 ENSMUST00000114262,ENSMUST00000064435,ENSMUST00000089242 3 3 4 82 16 74352848 74352866 GAGTTACGTTTGTGTTGCA 58 74047171 74352802 CATCTCGCAATAATGCCAC 59 NA Mus musculus 50 Robo2 ENSMUSG00000052516 ENSMUST00000114266 3 1 4 80 16 73933883 73933902 CTCAGTTCAACAGAAGACAG 58 73933407 73933840 TAAAGTAAGGCGTTGTTCC 57 NA Nonspecific Mus musculus 50 Adarb2 ENSMUSG00000052551 ENSMUST00000110670,ENSMUST00000110669,ENSMUST00000064473 1 3 3 88 13 8700904 8700922 CTTCCATCTCTACGTGAGC 59 8700974 8712860 GTTTGCTGCTGTTCAAGTC 59 NA Mus musculus 50 Sae1 ENSMUSG00000052833 ENSMUST00000108501,ENSMUST00000094815 3 2 2 86 7 16963769 16963787 GACTTGGAGCTGAAATTGC 59 16955797 16963720 CTTCTGGAGATACCTGTTCG 59 NA Mus musculus 50 Btn2a2 ENSMUSG00000053216 ENSMUST00000041541,ENSMUST00000110432,ENSMUST00000110433 1 3 3 80 13 23573805 23574597 CTCATTCCAGAATCCTTCGT 59 23573744 23573763 AATCAGCATTACTACAGGCA 59 NA Mus musculus 50 Adamts18 ENSMUSG00000053399 ENSMUST00000093113,ENSMUST00000035369 1 2 3 80 8 116261553 116262705 GATTTGTGAACTGGTGGGA 59 116261491 116261509 TTATCGCCTTTGCAAACAC 59 NA Mus musculus 50 Acbd4 ENSMUSG00000056938 ENSMUST00000107040,ENSMUST00000074474 3 2 6 134 11 102964949 102965415 CCTAAGAATGGGATGCCTG 59 102965773 102965791 AAACATATCCTCTGCCACC 59 NA Mus musculus 50 BC051142 ENSMUSG00000057246 ENSMUST00000114175,ENSMUST00000068051 1 2 7 96 17 34558919 34576786 TTCATCAGATAGCGTGCAG 59 34580384 34580402 AATAGGTCCAGGAGTTTGC 59 NA Mus musculus 50 Olfr1508 ENSMUSG00000057564 ENSMUST00000111542 3 1 1 62 14 53086571 53086589 AGAATCAGAAGGCACTCAG 58 53083651 53083670 GAAGTTTCGTTGATGAGGAC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zc3h4 ENSMUSG00000059273 ENSMUST00000098791,ENSMUST00000086119 1 2 4 80 7 17006838 17007542 GTATGAAGAGGAGATAGAGTATGG 59 17007580 17007599 TTCAGCTCCTTGGAATAGTC 59 NA Mus musculus 50 Rgs3 ENSMUSG00000059810 ENSMUST00000065870,ENSMUST00000098031,ENSMUST00000107424,ENSMUST00000084521,ENSMUST00000107428,ENSMUST00000107430 3 6 10 116 4 62287551 62292162 ATACAATCCCTGAAGAACCG 59 62292241 62292259 CTTGGTAGTTACTGTGGCC 59 NA Mus musculus 50 Dsc3 ENSMUSG00000059898 ENSMUST00000115847 1 1 3 80 18 20124178 20124196 TGGATACTGACAACTGCAG 59 20122180 20124135 CTCTAATGGAGTCTTCACCA 58 NA Mus musculus 50 Nr1h2 ENSMUSG00000060601 ENSMUST00000107912,ENSMUST00000073488 2 2 4 86 7 51807934 51807954 CACCCACTATTAAGGAAGAGG 59 51807607 51807888 CTAAGATGACCACGATGTAGG 59 NA Mus musculus 50 Zcchc14 ENSMUSG00000061410 ENSMUST00000046386,ENSMUST00000108906 2 2 2 80 8 124142603 124152478 AAACATGGCAAAGTGAGTG 58 124142541 124142559 GGAACACTCAACACTTCTG 58 NA Mus musculus 50 Slc22a12 ENSMUSG00000061742 ENSMUST00000113452,ENSMUST00000071115,ENSMUST00000113451 3 3 3 86 19 6538789 6540337 TTATTCATGGTGGCTACCAG 59 6538722 6538740 GCTACCCTCTGTAGTTCCT 59 NA Mus musculus 50 Zfp13 ENSMUSG00000062012 ENSMUST00000115516 2 1 2 218 17 23718212 23718230 GTAATGTGCAACACTGTGG 59 23717818 23718030 GAGAAGGAACAACTCCACC 59 NA DesignRelaxed Mus musculus 50 Lmnb2 ENSMUSG00000062075 ENSMUST00000057623,ENSMUST00000105332 3 2 2 77 10 80366776 80366870 CTTCAGACAAGGACCAGTC 59 80366717 80366735 ACTTGTAGGCAATGTCCTC 59 NA DesignRelaxed Mus musculus 50 A930013B10Rik ENSMUSG00000063109 ENSMUST00000075701,ENSMUST00000107892 2 2 2 235 11 88927513 88927531 CATCGTGGTGGAAATTTCC 59 88928798 88928816 GTTCAAAGGAAAGTGCACG 59 NA DesignNoJunction, InUTR Mus musculus 50 Scn1a ENSMUSG00000064329 ENSMUST00000112366,ENSMUST00000112371,ENSMUST00000077489,ENSMUST00000094951 1 4 4 82 2 66155915 66155933 GGGAGAGTCTGACTTTGAG 58 66141760 66155869 CGTTGAGTTTCTCTTTGCT 58 NA Mus musculus 50 Hnrnpr ENSMUSG00000066037 ENSMUST00000105850,ENSMUST00000084219 3 2 3 80 4 135870104 135870122 AAGACACTGATAGAGGCAG 58 135870164 135872289 ATAAGCTACCAATCCTGTCTG 59 NA Mus musculus 50 Cenpb ENSMUSG00000068267 ENSMUST00000103187 3 1 2 60 2 131003857 131003875 CACGTGACTAGGAAGAACC 59 131003815 131003833 AGCTTTGATGTCCAAGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp467 ENSMUSG00000068551 ENSMUST00000114566,ENSMUST00000101443,ENSMUST00000114560,ENSMUST00000114559,ENSMUST00000114558,ENSMUST00000114561 3 6 6 81 6 48392727 48393418 CTCCTTGGGATTCTCAGTG 59 48392664 48392682 CTTCTCCTGGGCATTACTG 59 NA Nonspecific Mus musculus 50 Hba-a1 ENSMUSG00000069917 ENSMUST00000093207,ENSMUST00000093206 1 2 2 103 11 32196935 32197087 TCAACTTCAAGCTCCTGAG 59 32197153 32197172 GGCAAGGAATTTATCCAGAG 58 NA Nonspecific Mus musculus 50 BC035537 ENSMUSG00000070044 ENSMUST00000093526,ENSMUST00000093525 1 2 2 92 8 46427860 46429821 GAACCAAACTGCAAACTGG 59 46427786 46427804 CAGTCTCAGAGCCTATTGG 59 NA Mus musculus 50 NP_001074713.1 ENSMUSG00000070285 ENSMUST00000093784 3 1 1 206 9 107496422 107496440 CCATCAGTGACCTACACAG 59 107496160 107496178 TTAGATAGACAGCCACGGT 59 NA DesignNoJunction Mus musculus 50 Rhox12 ENSMUSG00000071766 ENSMUST00000115146,ENSMUST00000096453 3 2 2 224 X 35461099 35461117 GAAGAACATTGGCAATGAC 57 35460342 35460911 AGGTTCTTCCTTGTGAGTG 59 NA DesignRelaxed Mus musculus 50 ENSMUSG00000073534 ENSMUSG00000073534 ENSMUST00000097524 1 1 1 60 18 75679545 75679563 CAGAGTTGGTGGAGTTCTG 59 75680707 75680725 CTGAAGAGGTGGTCTAGAG 58 NA DesignNoJunction, InUTR Mus musculus 50 Mup1 ENSMUSG00000073834 ENSMUST00000098046,ENSMUST00000107493 2 2 3 60 4 60674631 60674649 GCAAATCCATGTCTTGGAG 58 60673821 60674610 CTCTTCATCTCTTACAGTATGG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Spc24 ENSMUSG00000074476 ENSMUST00000098942,ENSMUST00000115369 2 2 2 176 9 21562213 21562232 GAACTGAAAGAATGTACGCG 59 21561766 21561784 ATCTACATCCCTCTCCTGG 59 NA DesignNoJunction Mus musculus 50 TRBV19 ENSMUSG00000076475 ENSMUST00000103276 2 1 1 60 6 41128615 41128633 ACCCTTTGTCTCCTTACTG 58 41128764 41128783 GTGTCTGAGTAATGATGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-81 ENSMUSG00000076539 ENSMUST00000103340 2 1 1 95 6 68940901 68940920 GGCACTTCTACCAAATTCTG 58 68940825 68940843 AGAGTAAGAGGTCCCAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV6-23 ENSMUSG00000076585 ENSMUST00000103386 2 1 1 76 6 70210907 70210925 GGAGACACATTCTCAGGTC 59 70210671 70210689 ACTGGGTCATCACAATGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV7-3 ENSMUSG00000076653 ENSMUST00000103462 1 1 1 60 12 115150337 115150355 AGTGCATCTATGAAGGGTC 58 115150295 115150313 GATAGAGGATGCTTTGGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRGV4 ENSMUSG00000076745 ENSMUST00000103554 3 1 1 60 13 19277290 19277310 AATCCTAGTGCTTCTACATCG 59 19277332 19277350 TAGCTTCGTCTTCTTCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV6-2 ENSMUSG00000076764 ENSMUST00000103573 2 1 1 60 14 53287253 53287272 ACACATGGAAATTCAGTGAC 58 53287294 53287313 GAAACTCCTCTTCTGAAAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV6D-7 ENSMUSG00000076818 ENSMUST00000103629 1 1 1 60 14 53938829 53938848 TCAAGGGACAAAGAGAAAGG 59 53938868 53938889 TGGTCCCTTTATCATATGTAGC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Etohi1 ENSMUSG00000078889 ENSMUST00000109022,ENSMUST00000109023,ENSMUST00000109020 1 3 9 137 2 175791976 175930121 GGATTTACTCACCTATGATGAC 58 175791655 175791880 CAACTGTAACCTATAGCTGTG 58 NA Nonspecific Mus musculus 50 Sp110 ENSMUSG00000079458 ENSMUST00000113408 1 1 1 61 1 85273377 85273395 GAATCTCTGGAAGCCTGTC 59 85273419 85273438 GTGAGAATATTGTGCACCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Phyhd1 ENSMUSG00000079484 ENSMUST00000091132,ENSMUST00000102860,ENSMUST00000113647,ENSMUST00000113645,ENSMUST00000113648,ENSMUST00000113643 1 6 7 110 2 30125348 30125366 ATGAGCAACTTCAAACCCA 59 30130059 30130210 GGACCAAGAAATTTCCTTTCTC 59 NA Mus musculus 50 mmu-mir-598 ENSMUSG00000076049 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-466f-4 ENSMUSG00000080580 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Fgf6 ENSMUSG00000000183 ENSMUST00000000187 3 1 1 76 6 126967096 126967115 AAGGAAGACTGTACACAACG 59 126974036 126974055 GTTGTAGTTGTTTGGAAGGA 57 NA DesignNoJunction Mus musculus 50 Dgke ENSMUSG00000000276 ENSMUST00000107894,ENSMUST00000000285 1 2 2 80 11 88913788 88913807 TCGTAGTGGAACTAACATGG 59 88912113 88913746 GTTACATCAAACACCTGGAC 58 NA Mus musculus 50 Hoxa10 ENSMUSG00000000938 ENSMUST00000000962 2 1 1 68 6 52182565 52182583 GAATCGCAGGATGAAACTG 58 52182515 52182533 TTAAAGTTGGCTGTGAGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Icam4 ENSMUSG00000001014 ENSMUST00000001040 1 1 1 159 9 20834560 20834578 ACTTTGACCTACGTGATGC 59 20834839 20834858 TAGAGGCCAAGGCTATAGAG 59 NA DesignNoJunction Mus musculus 50 Ramp2 ENSMUSG00000001240 ENSMUST00000001271,ENSMUST00000107282 3 2 2 122 11 101108993 101109133 TGATTAGCAGGCATTACAG 57 101109219 101109237 CAAAGTGTATCAGGTGAGC 58 NA InUTR Mus musculus 50 Hoxc11 ENSMUSG00000001656 ENSMUST00000001701 1 1 1 63 15 102786985 102787003 CATCAACAAAGAGAAGCGG 59 102787030 102787048 TTTCACTTGTCGGTCTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gstt1 ENSMUSG00000001663 ENSMUST00000001713 1 1 1 84 10 75249596 75249614 CTCCAGGACAAAGACTTCC 59 75246969 75249548 CACCTACAGGATGCATCAG 59 NA Mus musculus 50 Spa17 ENSMUSG00000001948 ENSMUST00000002013 1 1 1 117 9 37415209 37415227 GCTTCTATAACAACCACGC 58 37411058 37413382 TCAGTAGACTCCTCGAAGG 59 NA Mus musculus 50 Fkbp7 ENSMUSG00000002732 ENSMUST00000002809 2 1 1 80 2 76501404 76503747 TCTCCAAAGCTGAGATAGAG 58 76501343 76501363 CCTTCTGATATGACTTGTCAC 58 NA Mus musculus 50 Sh3gl1 ENSMUSG00000003200 ENSMUST00000003268 1 1 1 80 17 56158273 56158292 CTAGAGAAGTTCGAGGAGTC 58 56158087 56158231 GCTCACCTGCTCTATATCAG 59 NA Mus musculus 50 Ddr1 ENSMUSG00000003534 ENSMUST00000003628,ENSMUST00000097333 1 2 2 95 17 35822004 35822022 GACTTCCCTATCAGTGTGC 59 35821246 35821945 CAGGAAATCATTCCTGGCA 59 NA Mus musculus 50 Akt2 ENSMUSG00000004056 ENSMUST00000108344,ENSMUST00000108343,ENSMUST00000051356 1 3 3 85 7 28403262 28403280 AACACCTTTGTCATACGCT 59 28403329 28413864 CACTCTTCCCTCTCATCTG 58 NA Nonspecific Mus musculus 50 Cwc15 ENSMUSG00000004096 ENSMUST00000004200 1 1 1 83 9 14308057 14308075 CTTCAGTGTCAAAGAAGCC 58 14308122 14309286 CATCTTCCTCGTCTGTGAG 59 NA Mus musculus 50 Dennd2c ENSMUSG00000007379 ENSMUST00000007523 2 1 1 81 3 102961677 102961696 CTACTCCGTTCTTTATCGGG 59 102961740 102965484 TCAACTATCAGCACCTCCT 59 NA Mus musculus 50 Arid1a ENSMUSG00000007880 ENSMUST00000105897,ENSMUST00000008024 2 2 3 81 4 133276910 133278767 CTTATGCACAGCAGATTCC 58 133276847 133276867 TGGTTATAGTATGGAGTCTGG 58 NA Mus musculus 50 Cbx5 ENSMUSG00000009575 ENSMUST00000108813 3 1 1 106 15 103043575 103043594 GATGAGGAGGAATATGTGGT 58 103036095 103043506 CAAGTATTGTGCTCCTCAG 57 NA Mus musculus 50 Tmem190 ENSMUSG00000013091 ENSMUST00000013235 3 1 1 96 7 4735606 4735709 TATCTGTCTCTTCTGGTGG 57 4735769 4735787 TGAGGAGACTGTCTTTGAC 58 NA Mus musculus 50 Anapc1 ENSMUSG00000014355 ENSMUST00000014499,ENSMUST00000110333,ENSMUST00000110332 2 3 3 60 2 128511749 128511769 TCGAACTTCTCTGAAGAAAGG 59 128511709 128511728 GAACAAATTCCTGCAAATCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Crebl1 ENSMUSG00000015461 ENSMUST00000015605 1 1 1 80 17 34785233 34785530 ATCTTCCCAGATCTTCAGG 58 34785574 34785592 AAGATGTGAGGACTCTGAG 57 NA Mus musculus 50 Capza2 ENSMUSG00000015733 ENSMUST00000015877 3 1 1 93 6 17615106 17615305 AATACCAGACTGCCATCAG 59 17615361 17615380 ATCTTAGTACGTGTCACTGG 58 NA Mus musculus 50 Slc12a5 ENSMUSG00000017740 ENSMUST00000017884,ENSMUST00000099092,ENSMUST00000109311 3 3 3 128 2 164801948 164801967 ACATGATTTCCAGGTCTCTG 59 164802058 164804791 GGAAGAGATAAGCCAGCAG 59 NA Mus musculus 50 Pscd3 ENSMUSG00000018001 ENSMUST00000018145,ENSMUST00000116456 3 2 2 80 5 144468407 144468708 GAAGTCCATCAAAGCAAGC 59 144468751 144468770 TTCTTATTGGCAATCCTCCT 58 NA Nonspecific Mus musculus 50 Med1 ENSMUSG00000018160 ENSMUST00000092735,ENSMUST00000107545,ENSMUST00000018304,ENSMUST00000107541 2 4 4 82 11 98040448 98041342 GAGAATCCTGTGAGCTGTC 59 98034565 98034583 AGACCCTTAAGATGCTTGG 58 NA Mus musculus 50 Csf2 ENSMUSG00000018916 ENSMUST00000019060 1 1 1 83 11 54062061 54062838 GAGTTCTCCTTCAAGAAGCT 59 54061997 54062015 GAGTTTGGTGAAATTGCCC 59 NA Mus musculus 50 Tmem189 ENSMUSG00000019755 ENSMUST00000006587 3 1 1 250 2 167480181 167480200 TGATCCTCTGTTTCAGTCTC 58 167471611 167471629 GATGAAGTCATGCCTTGTG 58 NA DesignNoJunction Mus musculus 50 Snrpf ENSMUSG00000020018 ENSMUST00000020203 2 1 1 119 10 93050826 93050844 TTTCTCAATGGGCTGACAG 59 93046822 93050745 CTCTTCTGTATTTGCAAGCTG 59 NA Mus musculus 50 Sirt1 ENSMUSG00000020063 ENSMUST00000020257,ENSMUST00000105442 3 2 2 80 10 62786890 62787882 TTTAATCAGGTAGTTCCTCGG 59 62786830 62786849 AAAGAAGACAATCTCTGGCT 58 NA Mus musculus 50 Mboat2 ENSMUSG00000020646 ENSMUST00000110942,ENSMUST00000020976,ENSMUST00000116439,ENSMUST00000078902 3 4 4 80 12 25640212 25640232 GTCTACCCAGGATACTATCTG 58 25640271 25642455 CCTAAAGTTATTTCTCACAGCC 59 NA Mus musculus 50 Fbp2 ENSMUSG00000021456 ENSMUST00000021907 2 1 1 91 13 62950870 62955344 TTTACAGAAAGACCACGGA 58 62950797 62950815 ACCATACAGTGCATAACCC 59 NA Mus musculus 50 Zfyve16 ENSMUSG00000021706 ENSMUST00000022217 3 1 1 80 13 93278995 93279969 CAAGTTGGTGCTTTATTCCTC 59 93278935 93278953 ATAATTTCTGCCTGTCCCA 58 NA Mus musculus 50 Glud1 ENSMUSG00000021794 ENSMUST00000022322 3 1 1 80 14 35147468 35148496 TGTTGTTCAGGGATTTGGT 59 35148539 35148558 CCAACACCAACACATTTAGC 59 NA Mus musculus 50 Extl3 ENSMUSG00000021978 ENSMUST00000022550,ENSMUST00000111165 1 2 2 126 14 65675764 65675783 TGTATTCTTATGTGATGCCC 57 65673649 65675675 CTTGATGTCACCTTGATGG 58 NA Mus musculus 50 Med4 ENSMUSG00000022109 ENSMUST00000022705 2 1 1 105 14 73909970 73909989 GAAGATCTGGAGGTCTTGTC 59 73911026 73913627 TTAGCAACTCCAAGACCTG 59 NA Mus musculus 50 Atp6v1c1 ENSMUSG00000022295 ENSMUST00000022904 3 1 1 81 15 38603703 38605786 GATGCATTTGTAGAAGGTGTG 59 38605826 38605847 CCTGAACTTTATCTTTGCTGTC 59 NA Mus musculus 50 Rogdi ENSMUSG00000022540 ENSMUST00000023191,ENSMUST00000090453 1 2 2 77 16 5010982 5011000 TTATCTCCTAGCAAACCGG 58 5010642 5010941 ATAACAGCATCCATGAGCT 58 NA DesignNoJunction Mus musculus 50 Ogfod2 ENSMUSG00000023707 ENSMUST00000024470 2 1 1 74 5 124563469 124563489 CAGCTGAATATAGTACGTCCC 59 124563525 124564079 TCTCCTCTGACACTGTCTC 59 NA DesignNoJunction Mus musculus 50 Atp6v0c ENSMUSG00000024121 ENSMUST00000024932,ENSMUST00000098862 2 2 2 62 17 24301745 24301763 ATCATCCCAGTGGTTATGG 58 24301701 24301719 GATAAGTACTGCCACCACC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Tmem173 ENSMUSG00000024349 ENSMUST00000025207,ENSMUST00000115728 2 2 2 93 18 35895767 35898348 GTTGATCTTACCAGGGCTC 59 35895692 35895710 GATGTACAGTCTTCGGCTC 59 NA Mus musculus 50 Sncaip ENSMUSG00000024534 ENSMUST00000115410,ENSMUST00000025413 3 2 2 84 18 53011158 53028205 CAGATCAGTTTCTAGCTCTGG 59 53028251 53028269 TACATCAGCGATTCCAGTG 59 NA Mus musculus 50 1700011F14Rik ENSMUSG00000025090 ENSMUST00000069419,ENSMUST00000026077 3 2 2 89 19 58586853 58586871 TCTGGAGTCCTTGTTTCAG 58 58586922 58587122 GTAATCTCCGACCTTACTTCC 59 NA Mus musculus 50 4930442E04Rik ENSMUSG00000025093 ENSMUST00000026083 2 1 1 60 19 59247722 59247741 CGTTTAAAGTTGGGAGACTC 58 59247763 59247782 ATAAGCATTGAATGGTGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Bnc1 ENSMUSG00000025105 ENSMUST00000026096 3 1 1 128 7 89119925 89122107 ATATGTGTTACAGGATGCCT 58 89119816 89119834 GCCATGAGTTCAACTATGG 58 NA Mus musculus 50 Tsr2 ENSMUSG00000025264 ENSMUST00000112683,ENSMUST00000026295 3 2 2 92 X 147524950 147525158 AAGAAATGGAGGTGACAGC 59 147524876 147524895 TAATAGTCTGGGTGTCTGGA 59 NA Mus musculus 50 Shmt2 ENSMUSG00000025403 ENSMUST00000026470 2 1 1 175 10 126958042 126958060 TTATCAGACAGTGACCCTG 58 126957219 126957403 CCGTAGTATCTCTTGCCAG 59 NA Mus musculus 50 Tspan4 ENSMUSG00000025511 ENSMUST00000026585 1 1 1 95 7 148677487 148677505 AACAAGACCTGAAGAAGGG 59 148677564 148677682 AGCATCGGAAATCAGTCTG 59 NA Mus musculus 50 Sec61a2 ENSMUSG00000025816 ENSMUST00000102981,ENSMUST00000026925,ENSMUST00000026926,ENSMUST00000114951 3 4 4 80 2 5807596 5807614 TTTGGGATCATGTCATCGG 59 5803985 5807553 CATCAATGTTCCTCTGTTGG 58 NA Mus musculus 50 Tcfap2b ENSMUSG00000025927 ENSMUST00000027059,ENSMUST00000064976 1 2 2 96 1 19216649 19216667 AGTACAAAGTCACTGTGGG 59 19216727 19218531 GATTTGGCTCTTCTGAGGA 58 NA Mus musculus 50 Lactb2 ENSMUSG00000025937 ENSMUST00000027071 1 1 1 81 1 13637580 13640809 CAATAATGACACCACCTACTG 58 13637519 13637537 TTGCTGTTCTCCATTTCCT 59 NA Mus musculus 50 2310038H17Rik ENSMUSG00000025956 ENSMUST00000053469,ENSMUST00000114079 3 2 2 116 1 64661750 64661769 CATGTATCTGGAGATGGGTG 59 64654693 64654711 GTGATAGTCACCTGAGCAC 59 NA DesignNoJunction Mus musculus 50 Pms1 ENSMUSG00000026098 ENSMUST00000027267 1 1 1 80 1 53246335 53248954 ATTATCTGGAGGGAGAAGC 58 53246273 53246294 AGATAAGATCTTGGACATCCTC 58 NA Mus musculus 50 Igfbp5 ENSMUSG00000026185 ENSMUST00000027377 3 1 1 142 1 72909076 72909729 CAAGAGAAAGCAGTGTAAGC 59 72908953 72908971 ACTCAACGTTACTGCTGTC 59 NA Mus musculus 50 Pde6d ENSMUSG00000026239 ENSMUST00000027444 3 1 1 80 1 88442377 88443244 CAATGCCTAGAAGAGTGGT 58 88442315 88442333 TGCTTCTATCAAGGACTGC 59 NA Mus musculus 50 Ptf1a ENSMUSG00000026735 ENSMUST00000028068 3 1 1 66 2 19368237 19368255 GGTTATCATCTGCCATCGA 59 19368616 19368634 AGGAGGGAGACCATAATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930430A15Rik ENSMUSG00000027157 ENSMUST00000111010,ENSMUST00000028577 2 2 2 80 2 111034382 111034491 CCTAACTTGAAGTCTCCCA 58 111034320 111034339 TATGAAATGAGCTGATTCCG 57 NA Mus musculus 50 Crls1 ENSMUSG00000027357 ENSMUST00000028835,ENSMUST00000110122 2 2 2 81 2 132675670 132675691 CTACCTGATTCTTGAAGAAGAC 58 132675732 132680640 AAATCCATCCAACAAATCCG 58 NA Mus musculus 50 5430432M24Rik ENSMUSG00000027459 ENSMUST00000109864,ENSMUST00000109865,ENSMUST00000062047,ENSMUST00000109863 3 4 4 90 2 151795808 151795826 CTCTGCTACAGTGGAAGAG 59 151795736 151795756 ATATAGCCACTTGATCACACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700030G11Rik ENSMUSG00000027517 ENSMUST00000029022,ENSMUST00000109112 2 2 2 110 2 173394568 173396554 TAGGACTTGGAGCAAACTG 59 173394476 173394494 CACCATGTTCCAGTAAGGG 59 NA Mus musculus 50 Gnas ENSMUSG00000027523 ENSMUST00000076093,ENSMUST00000109083 3 2 14 85 2 174159757 174159775 ATCCTGCATGTTAATGGGT 58 174162286 174163133 GGGTAATAGACTCCATCGC 59 NA Mus musculus 50 Ndrg3 ENSMUSG00000027634 ENSMUST00000069600,ENSMUST00000072298,ENSMUST00000109558 3 3 3 82 2 156775820 156775839 GTCACCATAAGAGGCTTACC 59 156774086 156775776 AAGCAGGACTTATGGTTGAG 59 NA Mus musculus 50 Ghrh ENSMUSG00000027643 ENSMUST00000029172,ENSMUST00000109536 1 2 2 129 2 157157605 157159131 CATCATGAACAAGCAAGGG 59 157155351 157155369 CTTCATCCTTGGGAATCCC 59 NA DesignNoJunction Mus musculus 50 Mbnl1 ENSMUSG00000027763 ENSMUST00000029327,ENSMUST00000099087,ENSMUST00000076983 1 3 3 80 3 60419631 60419649 TTTCCAATACCAACAGGCT 59 60419693 60425360 ATGCACAATATTGAGCCTG 58 NA Mus musculus 50 Ints12 ENSMUSG00000028016 ENSMUST00000029650 1 1 1 81 3 132765467 132769908 AGATGAAGAGAATGGCTCAG 59 132769952 132769970 TTGACAGTTGGAGTCACAG 59 NA Mus musculus 50 Hormad1 ENSMUSG00000028109 ENSMUST00000090797,ENSMUST00000107154,ENSMUST00000029754 3 3 3 171 3 95374601 95374863 TTCTAGCTGTATACACCAATCC 59 95380248 95380267 CGAATGAGGAGAATACTTGC 58 NA Mus musculus 50 Gbp1 ENSMUSG00000028269 ENSMUST00000029936 1 1 1 84 3 142273943 142273961 GAATCCAAGGAGGATTTGG 57 142274008 142274322 TACGTTCCATTTCAATCTGC 58 NA Mus musculus 50 5830415F09Rik ENSMUSG00000028331 ENSMUST00000086563,ENSMUST00000030015 1 2 2 202 4 46393172 46394938 TTCAGGAGATGCTAGTCAG 58 46392988 46393006 TAATCCTCACAACCTCTGC 58 NA DesignRelaxed Mus musculus 50 Txndc4 ENSMUSG00000028343 ENSMUST00000030028 3 1 1 85 4 48249802 48249821 AGCATCTGATGTCATTAAGG 57 48232391 48249756 CTATATCAGAGTGCTGATCAC 57 NA Mus musculus 50 Nfia ENSMUSG00000028565 ENSMUST00000097969,ENSMUST00000107062,ENSMUST00000075448,ENSMUST00000107061,ENSMUST00000052018,ENSMUST00000107057,ENSMUST00000107055 1 7 7 83 4 97729810 97729828 GACGCTGAAAGAGTTTGTC 59 97729875 97731982 CTTCCATTGGGATTGAGGA 58 NA Nonspecific Mus musculus 50 Echdc2 ENSMUSG00000028601 ENSMUST00000106692,ENSMUST00000106691 2 2 10 74 4 107849718 107851519 GAGGAATGGAGAACATCCC 59 107851557 107851575 ATTTGGGAGCTCGTTTCTC 59 NA DesignRelaxed Mus musculus 50 Ppt1 ENSMUSG00000028657 ENSMUST00000030412,ENSMUST00000097902,ENSMUST00000097901 2 3 3 81 4 122523277 122525686 ACATCAAGGTGTCTTTGGA 58 122525731 122525749 GGCATTAAGTGACTTCCTG 58 NA Mus musculus 50 Stil ENSMUSG00000028718 ENSMUST00000030490,ENSMUST00000067847 2 2 2 80 4 114688880 114694085 TTCCAGTGAAGAGATCCTC 57 114694128 114694147 CTTCATCTTCAAGGTCAGTG 58 NA Mus musculus 50 Hp1bp3 ENSMUSG00000028759 ENSMUST00000105827,ENSMUST00000105826,ENSMUST00000105825,ENSMUST00000030541 1 4 4 83 4 137796578 137796597 CGATGAAGATGAAGATGACG 58 137796643 137797369 TTCTGTAAGCTCCTCTTGG 58 NA Nonspecific Mus musculus 50 Hpca ENSMUSG00000028785 ENSMUST00000030572 1 1 2 80 4 128795655 128795673 TTCAGCATGTATGACCTGG 59 128790010 128795611 CATCTTGTAAATGGCCTGC 59 NA Mus musculus 50 Csmd2 ENSMUSG00000028804 ENSMUST00000097880 3 1 2 185 4 128173418 128173436 CCTTCGGAGACTACATCAC 59 128174587 128176324 CTTTGATGATTCCACCTGAG 58 NA Mus musculus 50 Mecr ENSMUSG00000028910 ENSMUST00000030742,ENSMUST00000105983 3 2 2 186 4 131409718 131410509 TATGATCCAAGGGAACTATGG 58 131413697 131413715 AATCAGTGCTTCCTCACTG 59 NA Mus musculus 50 Car6 ENSMUSG00000028972 ENSMUST00000030817,ENSMUST00000105683 3 2 2 86 4 149570222 149570242 TTCAATAAGGAATACGGGACC 59 149567878 149570177 CTCGTCAATCTTAAACAAGACG 59 NA Mus musculus 50 Mad2l2 ENSMUSG00000029003 ENSMUST00000084129,ENSMUST00000030860,ENSMUST00000105708,ENSMUST00000105707 1 4 4 122 4 147517744 147518383 TCCATCAATTCAGACTCCC 58 147518764 147518782 GAGGACTGTAAATGTGCAG 58 NA Mus musculus 50 Nfe2l3 ENSMUSG00000029832 ENSMUST00000005103 1 1 2 89 6 51401067 51401085 GAGTAAGACGGAGGAACAC 59 51401138 51406606 CAATGTAGATGGCTCTCGT 59 NA Mus musculus 50 Mrpl53 ENSMUSG00000030037 ENSMUST00000113938 1 1 1 160 6 83059173 83059191 TTGAGAAGAACGTGGAGTC 59 83059520 83059538 CATAATCAGCCGATACCCA 58 NA Nonspecific, DesignNoJunction Mus musculus 50 D630042F21Rik ENSMUSG00000030160 ENSMUST00000032263 3 1 1 109 6 129464262 129466066 GTCAACACTGAACATTGCC 59 129466631 129466649 AAGCATACTGAAGTCAGGC 59 NA Mus musculus 50 Mgp ENSMUSG00000030218 ENSMUST00000032342 3 1 1 131 6 136821758 136822801 GTCCTATGAAATCAGTCCCT 58 136821268 136821286 TCTCTGTTGATCTCGTAGG 57 NA Mus musculus 50 Mesp2 ENSMUSG00000030543 ENSMUST00000107394 1 1 1 60 7 86956603 86956621 GACACAATCCACTGAACCT 59 86956645 86957432 TGGAGACACAGAAAGACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Klk7 ENSMUSG00000030713 ENSMUST00000032955 1 1 1 85 7 51067801 51067819 AATCAGCTTCACTGTGGAG 59 51067868 51068179 TGTACTTGGTACTGACCCA 59 NA Mus musculus 50 Cd19 ENSMUSG00000030724 ENSMUST00000032968 2 1 1 84 7 133553898 133554007 GGATGATGGACTTCCTGAG 59 133553166 133553184 TCTTCATAGGACTGGGACC 59 NA Mus musculus 50 Bcat2 ENSMUSG00000030826 ENSMUST00000033098 2 1 1 85 7 52843149 52843310 CATGAAGACGGAGTACTGG 59 52843359 52843377 AGATCCAGCAGACTTTGTC 59 NA Mus musculus 50 Ftsj1 ENSMUSG00000031171 ENSMUST00000033513,ENSMUST00000115595,ENSMUST00000115594 1 3 3 82 X 7822460 7822478 GAATGCTCCATCAACAGTG 58 7822214 7822414 TCATTGTCTTCCACCTTGG 59 NA Mus musculus 50 4930519F16Rik ENSMUSG00000031325 ENSMUST00000033688,ENSMUST00000061184,ENSMUST00000062544 1 3 3 81 X 100429603 100451177 CTGTCTGAAGAAATCGAAACC 59 100429542 100429563 GATTCTTTGACCATGTGAAGTG 59 NA Mus musculus 50 Amelx ENSMUSG00000031354 ENSMUST00000066112,ENSMUST00000112119,ENSMUST00000112118,ENSMUST00000062820 1 4 5 85 X 165621838 165621859 CCCTGGTTATATCAACTTAAGC 58 165620135 165620422 CATAGGAAGGATACGGCTG 59 NA Mus musculus 50 Mcf2l ENSMUSG00000031442 ENSMUST00000095456,ENSMUST00000110879,ENSMUST00000110876,ENSMUST00000033819,ENSMUST00000064464,ENSMUST00000098927,ENSMUST00000110873,ENSMUST00000110867,ENSMUST00000110866,ENSMUST00000110864,ENSMUST00000110863 2 11 12 60 8 13011808 13012806 TTTATATCATTCAGGCGCCA 59 13012829 13012847 TTCCGAATCTCATTCACCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Myom2 ENSMUSG00000031461 ENSMUST00000033842 2 1 1 80 8 15122455 15122646 CTGCTTATACCCAAGTTGTC 58 15122689 15122707 AGATACATCCTGACCTCTG 57 NA Mus musculus 50 Gpr124 ENSMUSG00000031486 ENSMUST00000033876 1 1 1 87 8 28230249 28230267 CAAGGAGCTTAGTTGGAGG 59 28230318 28230931 AATCAAGTAGAACCGGAGC 59 NA Mus musculus 50 Isx ENSMUSG00000031621 ENSMUST00000034034 1 1 1 83 8 77413948 77413966 TTACCCTGACATCCATGTC 58 77414012 77415714 TGATTCTGGAACCAGATCTG 59 NA Mus musculus 50 Ucp1 ENSMUSG00000031710 ENSMUST00000034146 3 1 1 82 8 85817973 85818085 CAACACTTTGGAAAGGGAC 58 85818129 85818149 CATGAGGTCATATGTTACCAG 57 NA Mus musculus 50 2310079N02Rik ENSMUSG00000031851 ENSMUST00000034313 2 1 2 223 8 128269334 128271604 AAGGTGTTCAATGTCACCA 59 128271791 128271809 ATACAAGTCTGGAGCTCAC 58 NA DesignRelaxed, InUTR Mus musculus 50 Ints10 ENSMUSG00000031864 ENSMUST00000110241,ENSMUST00000110242,ENSMUST00000034328,ENSMUST00000070713 3 4 4 81 8 71320654 71320672 AAATCAGCATCATCACGTC 58 71320716 71321673 AGGGTTTCAAATAAACTCCG 58 NA Mus musculus 50 Cbfb ENSMUSG00000031885 ENSMUST00000052209,ENSMUST00000109394,ENSMUST00000109392 1 3 4 84 8 107718422 107718440 GAAGGGCTGGATTGATCTC 59 107718488 107726366 TAATGCATCTTCCTGCTGG 59 NA Mus musculus 50 4931406C07Rik ENSMUSG00000031938 ENSMUST00000034414 3 1 1 85 9 15102345 15102363 CAACTTTGCTGATGTCCAG 59 15099195 15102296 CACAGATGCCTCTTACAGG 59 NA Mus musculus 50 Cog2 ENSMUSG00000031979 ENSMUST00000034460,ENSMUST00000108803,ENSMUST00000093038 2 3 3 80 8 127056367 127056386 CAGAGTTTAACCAGCTTCAG 58 127056429 127057123 CAGCTATACGAGGTCTCAC 58 NA Mus musculus 50 Syncrip ENSMUSG00000032423 ENSMUST00000069221 2 1 1 81 9 88357124 88357143 ACTGGAACGAGTAAAGAAGC 59 88356618 88357081 TTCTTCCATAGCCTTGACAG 59 NA Mus musculus 50 Lrrfip2 ENSMUSG00000032497 ENSMUST00000098339,ENSMUST00000035078,ENSMUST00000098340 2 3 3 81 9 111102271 111102290 AAGGATGTCATTGAAGAGCA 59 111102333 111108271 GCCTTTCTAACTCCTTTGAC 58 NA Mus musculus 50 Ihpk1 ENSMUSG00000032594 ENSMUST00000035214 3 1 1 81 9 107943408 107947066 AAACTCTACAAGTTCCTCCTG 59 107947109 107947127 GGGTACCCATCTTCAAGTC 59 NA Mus musculus 50 Oas1d ENSMUSG00000032623 ENSMUST00000044224 1 1 1 89 5 121365882 121365900 TTCTGAGCTTCAAGCTGAG 59 121365952 121366859 GTCTTACTTCATACAGGGCA 59 NA Mus musculus 50 Lrig2 ENSMUSG00000032913 ENSMUST00000046316,ENSMUST00000106793 2 2 2 81 3 104269682 104270974 CTGTAAATGAGATGCCGTC 58 104269619 104269637 GCACATTCTAATCTTGCCA 58 NA Mus musculus 50 Entpd6 ENSMUSG00000033068 ENSMUST00000094467 2 1 1 92 2 150589908 150591196 GAAACCTGCTGAGAATGAC 58 150591252 150591270 ATTCTATAGGTGACCTCCG 57 NA Mus musculus 50 Gtf2a2 ENSMUSG00000033543 ENSMUST00000116552 3 1 3 169 9 69863201 69864629 TTGATGAGCTCATACAGTCTC 59 69866516 69866534 GTAGTTGTGACCACCTGAC 59 NA Mus musculus 50 Zdhhc15 ENSMUSG00000033906 ENSMUST00000042070 3 1 1 82 X 101756074 101756092 TGAATGAGTCACAGAACCC 59 101740230 101756028 GCCTTCTGGATAATCTCGA 58 NA Mus musculus 50 Dnahc17 ENSMUSG00000033987 ENSMUST00000045365,ENSMUST00000084803 1 2 3 80 11 117906583 117906602 ACATTGGTGAAACTGTAGAC 57 117904527 117906540 CGATCTTAATGAACCTCCC 57 NA Mus musculus 50 Cacna1a ENSMUSG00000034656 ENSMUST00000038122 1 1 1 80 8 87118057 87118076 AACATCTTCGACTTTGTGAC 58 87118117 87125305 CAGGTTGATGAAGTTATTCCC 58 NA Mus musculus 50 Sema3f ENSMUSG00000034684 ENSMUST00000038162,ENSMUST00000080560 3 2 2 87 9 107595037 107607772 GTCATTCAAAGAACTTAAGGCC 59 107594971 107594989 ATCCTTGAGCAGGATTCTG 59 NA Mus musculus 50 Txndc13 ENSMUSG00000034723 ENSMUST00000038228,ENSMUST00000110120,ENSMUST00000110119 3 3 3 83 2 134465556 134469578 TTTATGCTCCATGGTGTCC 59 134465491 134465510 TGATCTGAAGTGTTTCTCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tle6 ENSMUSG00000034758 ENSMUST00000072020 1 1 1 80 10 81057327 81057967 ATTTCTGAAGCCCTTGTCC 59 81057265 81057283 TCTAATTGCCAGAGTGCTG 59 NA Mus musculus 50 Mylc2b ENSMUSG00000034868 ENSMUST00000038446 3 1 1 64 17 71326416 71326434 TGGCTTCATTGACAAGGAG 59 71324943 71326388 CATCAGTGGGATTCTTCCC 59 NA DesignNoJunction Mus musculus 50 Fbxo33 ENSMUSG00000035329 ENSMUST00000043204 2 1 1 87 12 60305358 60305376 CTTAGTGACAACCGAAACG 58 60303658 60305307 CGGTGTAACCATGAATTGC 59 NA Mus musculus 50 Sostdc1 ENSMUSG00000036169 ENSMUST00000041407 1 1 1 60 12 37041080 37043632 GAAACAGTCGAGTTCAAGTG 59 37043655 37043673 CCGTCCGAAATGTATTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Siah1a ENSMUSG00000036840 ENSMUST00000045296 2 1 1 65 8 89249068 89249087 TATCGACTTGAGCTAAATGG 57 89249022 89249040 ATGAATAGACCGAGGAGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ehmt1 ENSMUSG00000036893 ENSMUST00000102938,ENSMUST00000046227,ENSMUST00000114418,ENSMUST00000114432,ENSMUST00000091348 1 5 5 80 2 24661783 24661802 TGCTGTGAATATCCATGGAG 59 24660750 24661742 GAAAGAAAGAGGACAACACAG 59 NA Mus musculus 50 Tas2r108 ENSMUSG00000037140 ENSMUST00000038750 2 1 1 60 6 40444056 40444075 CCTGAACACATAATTGGGAG 58 40444097 40444116 ACGTCAAGATACCATCACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kin ENSMUSG00000037262 ENSMUST00000042512 1 1 1 96 2 10007370 10007390 GTCACTGTATGTCTGAATCTC 57 10007448 10011754 TCATTTCGGAATTCCTCTG 57 NA Mus musculus 50 Spon2 ENSMUSG00000037379 ENSMUST00000046186 3 1 1 98 5 33559050 33559068 CTTTATCCACACGATGCAG 58 33558361 33558988 TGAGGCTGTTATCTCAGTC 58 NA Mus musculus 50 Icam1 ENSMUSG00000037405 ENSMUST00000086399 1 1 1 82 9 20832051 20832069 GAATGGTACATACGTGTGC 58 20832114 20832223 GAGAGTGGTACAGTACTGTC 58 NA Mus musculus 50 Ccdc33 ENSMUSG00000037716 ENSMUST00000098681 1 1 3 149 9 57965003 57965120 CAGAGCTACAGACTTCGAG 59 57962125 57962143 TTTCCCTCTTCAACAGCTC 59 NA Mus musculus 50 Defb7 ENSMUSG00000037790 ENSMUST00000047851 3 1 1 65 8 19495125 19495143 TCTGTTCGCATTTCTCCTG 59 19497544 19497563 TTACTGTTGATGTCTTGGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Crp ENSMUSG00000037942 ENSMUST00000038495 3 1 1 60 1 174629008 174629026 AGATGTGAACATGTGGGAC 59 174629050 174629068 ACCAACATAGACTGTGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pde4dip ENSMUSG00000038170 ENSMUST00000090750,ENSMUST00000107038,ENSMUST00000045243 3 3 3 80 3 97561508 97561526 CAGGAGTCATCTCAGAAGC 59 97561211 97561464 CTCCTCAGTCTCACTTTCC 58 NA Mus musculus 50 Mesdc2 ENSMUSG00000038503 ENSMUST00000094215 3 1 1 90 7 91044255 91046261 CAACTATGACGTTCAGAGGT 59 91046314 91046332 AAAGTCCTTGATCTCCCAG 58 NA DesignNoJunction Mus musculus 50 Mboat1 ENSMUSG00000038732 ENSMUST00000047311 1 1 1 90 13 30311552 30314252 TTCATGATGGATTGGGTCG 59 30316260 30316278 AAGTATTCCAGAAGCGAGG 59 NA Mus musculus 50 Ddx58 ENSMUSG00000040296 ENSMUST00000037907,ENSMUST00000108111 1 2 2 80 4 40160808 40160828 AAGAGTACCACTTAAAGCCAG 59 40158658 40160767 TCCATTTCTTCAGAGCATCC 59 NA Mus musculus 50 Abhd13 ENSMUSG00000040396 ENSMUST00000048216 3 1 1 60 8 9988358 9988377 GATCAAGAGTCATTCTCCCG 59 9988399 9988418 TCAGATGATGGTGACATTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Chrm4 ENSMUSG00000040495 ENSMUST00000045537 2 1 1 60 2 91767549 91767567 TAACATCCTGGTGATGCTG 59 91767591 91767609 GTAGTTGTTGACTGTCTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Arhgef10l ENSMUSG00000040964 ENSMUST00000069623,ENSMUST00000097820,ENSMUST00000105800,ENSMUST00000039204,ENSMUST00000105799,ENSMUST00000105798,ENSMUST00000105797 1 7 7 82 4 140124304 140124322 ACGACAAAGACAATCTGCT 59 140121149 140124258 CAGGTACACCTTGTTCTGG 59 NA Mus musculus 50 Cftr ENSMUSG00000041301 ENSMUST00000101643 2 1 4 61 6 18205464 18205961 TCTTTAGCAAGACAAAGGAC 57 18205984 18206005 GAAACAAACACAGAAAGCCT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Prrxl1 ENSMUSG00000041730 ENSMUST00000068938 2 1 1 88 14 33421631 33460238 CTCTGAAAGATCATTTCCGAG 58 33460288 33460306 GTTTGGAGTTAAGGCTCTC 57 NA Mus musculus 50 Cox10 ENSMUSG00000042148 ENSMUST00000049091 2 1 1 85 11 63885072 63885093 GTGGAAAGAGATGAAACTTCAC 59 63858842 63885026 TTACCACAAGAGCTGTGAG 59 NA Mus musculus 50 Bag2 ENSMUSG00000042215 ENSMUST00000044691 3 1 1 139 1 33803853 33805073 AGATTAGCGATGGAGAAAGAG 59 33803734 33803752 TATAATCCTCGTGGCATGC 59 NA Mus musculus 50 Gzmk ENSMUSG00000042385 ENSMUST00000038212 1 1 1 80 13 113964275 113970654 CTGCTACTCTTGGTTTCCC 59 113964213 113964231 TTCATGGGCTCATTCTTGG 59 NA Mus musculus 50 Dusp15 ENSMUSG00000042662 ENSMUST00000109811,ENSMUST00000069018,ENSMUST00000037715 2 3 3 81 2 152774852 152776370 TGGAAACTTCATTGATGCC 58 152774789 152774807 GGGTGATTCGTGGATAGAG 59 NA Mus musculus 50 Myo15 ENSMUSG00000042678 ENSMUST00000071880,ENSMUST00000094135,ENSMUST00000094136,ENSMUST00000108720,ENSMUST00000081823 2 5 5 80 11 60305401 60306064 ATATGGCTTTGAGGACCTG 59 60306107 60306126 AACAGGTACTGAAGGTTCTC 58 NA Mus musculus 50 Serpinb6b ENSMUSG00000042842 ENSMUST00000110293,ENSMUST00000017184 1 2 2 80 13 33069532 33069827 CACATTGAACTAAGTATGGTGG 59 33069868 33069886 TTCTTCCATCTTGTCCAGC 59 NA Mus musculus 50 ENSMUSG00000042857 ENSMUSG00000042857 ENSMUST00000059598 2 1 1 84 13 95128502 95128520 TCTAGACGTGAAAGCTCCT 59 95128436 95128454 AAACTTAGGCAAAGCTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4922501L14Rik ENSMUSG00000042943 ENSMUST00000051862 2 1 1 94 3 154383234 154390368 CTTGAGAAAGACACCTTTCAG 58 154390424 154390442 ATCCTGTTCACCTGAATCC 58 NA Mus musculus 50 B430119L13Rik ENSMUSG00000043110 ENSMUST00000049787 2 1 1 82 2 132703799 132703817 AGCACTTACTTCTGTTCAC 57 132697881 132703753 AACTCAAGTTGCAGTTCTG 58 NA Mus musculus 50 Lgals2 ENSMUSG00000043501 ENSMUST00000044584 1 1 1 89 15 78681756 78681774 TGTAACACCAGTGAAGGTG 59 78681572 78681704 GATGGTGATCTTGACCTCTG 59 NA Mus musculus 50 A830010M20Rik ENSMUSG00000044060 ENSMUST00000100951,ENSMUST00000112671 2 2 4 60 5 107939615 107939633 TGAAGACCTAAGCTTAGCC 58 107939657 107939675 GCTATCTCGAGCTAAGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr978 ENSMUSG00000044292 ENSMUST00000057161 2 1 1 61 9 39802193 39802211 CTGTAGATGGAATTGTGGC 58 39802236 39802254 CACAACAGGGTTGAGTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC054059 ENSMUSG00000044405 ENSMUST00000109484,ENSMUST00000059889 1 2 2 120 2 158331547 158331565 AGATTTGTGCTTCAACTGG 58 158331649 158333700 CAGATGGTACCTGGTAGAG 58 NA Mus musculus 50 Olfr779 ENSMUSG00000044537 ENSMUST00000069063 3 1 1 113 10 128748842 128748861 CACTGGTACTAGTGAGTCTC 58 128748936 128748955 CAACAAACATGTGGGATGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cox19 ENSMUSG00000045438 ENSMUST00000049630 2 1 1 73 5 139818521 139818540 GTATTTAATGTGCAGGATGC 57 139814280 139814298 TTAGGTCTCTAAAGCCGAG 58 NA DesignNoJunction Mus musculus 50 St7l ENSMUSG00000045576 ENSMUST00000106769,ENSMUST00000059271,ENSMUST00000098765 1 3 3 81 3 104725185 104729354 GAGCTATTGCCTACTTTCCA 59 104729398 104729416 ACAGTCCTGCTGTAAAGTG 59 NA Mus musculus 50 4931422A03Rik ENSMUSG00000046085 ENSMUST00000056170 3 1 1 172 2 103867434 103867942 TAGCACAGGCTTCTAAACC 59 103834054 103866290 TCTGTTATGGATCCAGTGGA 59 NA InUTR Mus musculus 50 BC089491 ENSMUSG00000046750 ENSMUST00000108316 3 1 1 80 7 29073056 29073154 TCCATTCCAAGAAGAAAGGT 58 29072995 29073014 TGATCTCTTCGTCAATAGCA 58 NA Nonspecific Mus musculus 50 Spz1 ENSMUSG00000046957 ENSMUST00000050658 2 1 1 60 13 93345294 93345312 GATCACTGGAGTAAACAGC 57 93345252 93345270 GGCATTCCTGATATGACCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 C230078M08Rik ENSMUSG00000047439 ENSMUST00000059100 3 1 1 62 17 26582122 26582140 CATGAGGTTGAAGACTGGG 59 26582165 26582184 TATGATCTCTTGCCTGAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp2 ENSMUSG00000049321 ENSMUST00000116378,ENSMUST00000109129,ENSMUST00000077686,ENSMUST00000109128,ENSMUST00000109130 2 5 5 60 11 50713475 50713495 TATGAATGTGATCAGTGTGGG 59 50713435 50713453 TCTGGTGCACTATAAGGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr902 ENSMUSG00000049334 ENSMUST00000050733 3 1 1 60 9 38257140 38257158 AGTTCCTCTAAGGGTAGGT 58 38257182 38257200 AAACAGCGATTATGTGGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000010217 ENSMUSG00000049410 ENSMUST00000105884 1 1 1 80 4 133610571 133611431 CCTCAAACATGAGACACCA 59 133611474 133611493 TCAGTGAGTCCTTGATTGTG 59 NA Nonspecific Mus musculus 50 Htr1b ENSMUSG00000049511 ENSMUST00000051005 1 1 1 60 9 81525056 81525074 CATCATCTACACCATGTCC 57 81525014 81525032 AAAGCGTATCAGTTTGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zbtb45 ENSMUSG00000049600 ENSMUST00000051390 1 1 1 86 7 13591729 13592390 ACATGTTCATCCACTCTGG 59 13591661 13591680 TATGCTTGAGCAGGTAATCG 59 NA DesignNoJunction Mus musculus 50 Gpr55 ENSMUSG00000049608 ENSMUST00000086975 2 1 1 60 1 87837517 87837536 CATCAAAGAATTTCGCATGC 58 87837476 87837494 GTTGACCAGCTTGATTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Spink8 ENSMUSG00000050074 ENSMUST00000055821 2 1 1 81 9 109723141 109723159 TCAGTGAGCCTATATGTGG 58 109723201 109727034 CTGTCTTCATATAGAATTCCGG 58 NA Mus musculus 50 Foxc1 ENSMUSG00000050295 ENSMUST00000062292 1 1 1 60 13 31900600 31900618 GGAAATGTTCGAGTCTCAG 57 31900642 31900660 GCTACTATTCCCATTCACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Muc15 ENSMUSG00000050808 ENSMUST00000111017,ENSMUST00000090332 3 2 3 98 2 110574099 110577508 CAGAAACGAACCAGTTCTG 58 110577570 110577588 GATGAATCACTCACAGCTG 58 NA Mus musculus 50 Zfp11 ENSMUSG00000051034 ENSMUST00000049778 2 1 1 72 5 130166648 130166666 GAGTCAGGAATCATGTCCC 59 130164210 130164228 CTGGGTGTTGATCAAAGTC 58 NA DesignNoJunction, InUTR Mus musculus 50 Dpm1 ENSMUSG00000051149 ENSMUST00000088001,ENSMUST00000057793,ENSMUST00000109196 2 3 3 95 2 168014798 168014817 GACATTGGGTTGGAATACTG 58 168013100 168013118 TACATCCTCCCATGTAGTG 57 NA DesignNoJunction Mus musculus 50 Flrt3 ENSMUSG00000051379 ENSMUST00000056760 2 1 2 93 2 140487478 140489005 TCACAGCAGTAACAGAAGC 59 140487403 140487421 TAGTCCCGATGAGGAAGAG 59 NA InUTR Mus musculus 50 Tacstd2 ENSMUSG00000051397 ENSMUST00000058178 1 1 1 64 6 67485244 67485262 CACATCCTCATTGAGTTGC 58 67485198 67485216 GAGTCTAGGTCAGAGTGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hist1h1e ENSMUSG00000051627 ENSMUST00000062045 2 1 1 85 13 23713885 23713903 CAAAGAAAGCGAAGAAGCC 59 23713818 23713836 CTTCTTAGCCTTAGTTGCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cdc42se2 ENSMUSG00000052298 ENSMUST00000064104 1 1 1 94 11 54537137 54537155 GAAGTATGATCGGAGAGCC 59 54533845 54537079 CTGAATGGAGCTGACTGAG 59 NA Mus musculus 50 Traf7 ENSMUSG00000052752 ENSMUST00000088464,ENSMUST00000070777 2 2 2 83 17 24649010 24649028 TACTGGATGAGAACCAGAG 57 24648757 24648963 GAGACAGCTCATCATTCAG 57 NA Mus musculus 50 Nfib ENSMUSG00000052757 ENSMUST00000064785 2 1 1 98 4 81938476 81938494 GTTTAGAGACTGGACTCGA 58 81938396 81938417 CAAGAACCTGTGAAATATCTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 9030619P08Rik ENSMUSG00000053168 ENSMUST00000096397 1 1 1 129 15 75261819 75261837 TGTGCTCATCCTTCTTGTG 59 75258599 75260390 CTCTGAGAGTCATCCATTCAG 59 NA InUTR Mus musculus 50 Rab4b ENSMUSG00000053291 ENSMUST00000093040 1 1 1 89 7 27960899 27961184 GAATAAGTTCAAACAGGACTCC 58 27960831 27960850 TGTAGTTTCACAGTCTTCCC 59 NA Mus musculus 50 ENSMUSG00000053512 ENSMUSG00000053512 ENSMUST00000064970 1 1 1 123 X 45816240 45816258 ACTGGAAAGGTTAGAGCAC 59 45816135 45816153 CTCCAACTTTCCTGGATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001025461.1 ENSMUSG00000053773 ENSMUST00000066387 1 1 1 81 9 20627161 20627180 CGTGTGCAATGATGAATCAG 59 20627224 20627761 TCCTGCATTGTTCACTAGC 59 NA Mus musculus 50 OTTMUSG00000007026 ENSMUSG00000053957 ENSMUST00000066727 2 1 1 96 3 100317632 100326770 CTGAATCCTGTCGTTTCTC 57 100326830 100326848 CATACAAGTTGTGGGTCAG 58 NA Mus musculus 50 Cpa1 ENSMUSG00000054446 ENSMUST00000031806 2 1 1 88 6 30589986 30590004 CAGGTTCTCCGAATCTCTG 59 30590055 30590518 CAGAAGTCCAACTTCAAGTG 58 NA Mus musculus 50 1810053B01Rik ENSMUSG00000054582 ENSMUST00000067715 3 1 1 81 2 163858048 163858236 CCAGTTTGGAAATATGCAGAG 59 163858279 163858297 CTCAAAGTTGACAAAGCCG 59 NA Mus musculus 50 9130230L23Rik ENSMUSG00000054598 ENSMUST00000067737 1 1 1 81 5 66379761 66381084 AATTACAGGACTCTCAGGGT 59 66379699 66379717 CTGATAAGAAGCCGAAGCT 59 NA Mus musculus 50 Cstl1 ENSMUSG00000055177 ENSMUST00000109954 2 1 4 139 2 148576726 148580352 ATGGCTAAGTTGACCACAG 59 148581001 148581019 AGTGATTTGCAAATCAGGC 59 NA Mus musculus 50 E030030I06Rik ENSMUSG00000055657 ENSMUST00000105524 3 1 2 106 10 21868372 21868390 AGTACAGACCAGTGAGGAG 59 21834144 21868303 ATATGAATGCTCTGACCACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem191c ENSMUSG00000055692 ENSMUST00000069420 2 1 1 76 16 17278265 17278283 CCTAGAGTGCATCATGTCG 59 17278323 17278341 TTCATATAAGCAGGCACCC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Myh8 ENSMUSG00000055775 ENSMUST00000019625,ENSMUST00000042490,ENSMUST00000108686,ENSMUST00000108685 1 4 4 80 11 67092558 67093399 AAAGTGGAGCAACTCTCAC 59 67093443 67093461 CCATGTCCTCGATCTTGTC 59 NA Mus musculus 50 V1ri2 ENSMUSG00000056882 ENSMUST00000072972 3 1 1 62 13 23168489 23168509 GGTTATGTTAGTTTCAGTCCC 58 23168532 23168551 GAAGACATTAGGAGGATGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Aadat ENSMUSG00000057228 ENSMUST00000079472,ENSMUST00000098756 3 2 2 80 8 63010482 63010500 TCTCCATGGATGTTGATGG 59 63010543 63011012 TAAACCCTACTCTCAACCCT 59 NA Mus musculus 50 Lgals8 ENSMUSG00000057554 ENSMUST00000064217,ENSMUST00000099821,ENSMUST00000099820 1 3 3 80 13 12548658 12548677 TTACTGAGCAATTGAAGCCT 59 12547199 12548617 AGTCAACCTGGAATCTTTCTG 59 NA Mus musculus 50 V1rc10 ENSMUSG00000057612 ENSMUST00000077482 1 1 1 60 6 66681813 66681832 TCTATACTGGCGCTTATACC 58 66681854 66681873 CAGGATTTAGTCACCTTCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr135 ENSMUSG00000057801 ENSMUST00000076245 3 1 1 60 17 38345907 38345926 GGACATGTTCCTCTCATCTC 59 38345947 38345967 TACATACTAATACCTGGGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1126 ENSMUSG00000058194 ENSMUST00000071355 3 1 1 60 2 87297970 87297991 CTTTCTTGTTGATACTTGCCTC 59 87298012 87298030 GTTGGCAACTTCAGAATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mia1 ENSMUSG00000058217 ENSMUST00000071986 3 1 1 112 7 27965269 27965287 TTACTATGGAGACCTGGCA 59 27964841 27965194 AGAAATCCCATTGATCGGTC 59 NA Mus musculus 50 Olfr412 ENSMUSG00000058275 ENSMUST00000077794 1 1 1 60 11 74178703 74178722 CTTCTGCGAAATGTATGTCC 58 74178745 74178763 CATGTGATTGATGTGGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000005737 ENSMUSG00000058287 ENSMUST00000108825 2 1 1 60 11 58248355 58248373 CGTGTGAATCCTCTAAAGG 57 58248397 58248871 TATGTTTGATGTGCTCCCA 58 NA Nonspecific, DesignRelaxed Mus musculus 50 LOC100045960 ENSMUSG00000058685 ENSMUST00000094863 2 1 1 60 7 10677627 10683484 GAAGAAAGATGCCATCCTC 57 10677585 10677606 CATAATCTTCTGAATCCAGGAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 0610039K10Rik ENSMUSG00000058812 ENSMUST00000076667 1 1 1 71 2 163471160 163471178 GGAATGTTGGCAAACTCAG 59 163471212 163471231 GGGATTACAGATGCTAACTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr108 ENSMUSG00000059687 ENSMUST00000078207 1 1 1 60 17 37583022 37583041 TTTCTGTGATTGTAGGCCTC 59 37583064 37583082 GACCTCATTGAGGTGAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem40 ENSMUSG00000059900 ENSMUST00000112946,ENSMUST00000072933 3 2 2 81 6 115691679 115692335 AGATCACTACCAAGAGACAG 58 115691617 115691636 TGAAGAGGAAGACTTGTCTC 58 NA Mus musculus 50 Rpl3 ENSMUSG00000060036 ENSMUST00000081650 1 1 1 80 15 79912086 79912107 CTTCAAGACTGTATTTGCTGAG 59 79911444 79912047 TTCTTCTTAGACTTGTGCCAG 59 NA Nonspecific Mus musculus 50 Tdpoz4 ENSMUSG00000060256 ENSMUST00000075953 1 1 1 64 3 93601337 93601355 GCTGAAGCATTTCACTCTC 58 93601383 93601401 AGTTGTTTGAAAGGGAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hnrnpc ENSMUSG00000060373 ENSMUST00000111610,ENSMUST00000075799 3 2 2 122 14 52701559 52701577 TATTAACCTGGCTGCAGAG 59 52700974 52701474 AATGAGGAACTGAGTAGAGG 58 NA Mus musculus 50 Gm839 ENSMUSG00000060416 ENSMUST00000079186 2 1 1 270 6 89164927 89166048 GAAGACAACACAGGATGGA 59 89162548 89162566 AAATCCAGGGTCTGAAAGC 59 NA DesignNoJunction, InUTR Mus musculus 50 Ang4 ENSMUSG00000060615 ENSMUST00000073860 1 1 1 61 14 52383900 52383918 AAAGGAAGCCCTTATGGAG 58 52383857 52383875 CAAGTGGTGATCTGGAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr464 ENSMUSG00000060787 ENSMUST00000074874 1 1 1 60 11 87728378 87728396 AGAACATCACATGGGTGTC 59 87728336 87728354 TGGAGTTCTTGAGTCTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000000655 ENSMUSG00000061330 ENSMUST00000080443 2 1 1 62 13 28349506 28349525 TGTCTCTAGAGATCCCTGAG 59 28349550 28349568 CATCGATGTTGGTGTTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr168 ENSMUSG00000061361 ENSMUST00000078554 1 1 1 60 16 19530926 19530945 GGCCTACTACTTATGATGCT 58 19530885 19530903 CTGAGTTTCCAAACAAGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mrps36 ENSMUSG00000061474 ENSMUST00000078573 3 1 2 103 13 101509142 101511134 CTAAACTCAGTGAAGCTTTGG 59 101509059 101509077 CTGGTGCATCAGTAAATCG 58 NA Mus musculus 50 Snrpa ENSMUSG00000061479 ENSMUST00000080356 3 1 1 80 7 27978058 27980477 AGATCAAGAAGGATGAGCT 57 27977996 27978014 GAGACACCAGGATATCCAG 58 NA Nonspecific Mus musculus 50 Ext1 ENSMUSG00000061731 ENSMUST00000077273 1 1 1 80 15 52900399 52904860 AATGATGGGACAGACTTCC 58 52900337 52900356 AATGTATTCATGCAGCTCTG 58 NA Mus musculus 50 Zscan20 ENSMUSG00000061894 ENSMUST00000084276,ENSMUST00000097877,ENSMUST00000106082 1 3 3 80 4 128265306 128265324 GGGTGAGATGGAAGATGAG 59 128264073 128265262 CGCTTCAACTCAAATCCTG 59 NA Mus musculus 50 Gm382 ENSMUSG00000062791 ENSMUST00000096332 3 1 1 184 X 123591657 123594648 AGTAATATGCAAGGAGGAAGC 59 123594794 123594812 ACGAACCACATCATTTGGA 59 NA DesignNoJunction, InUTR Mus musculus 50 2900042B11Rik ENSMUSG00000063172 ENSMUST00000054209 2 1 3 166 4 106935173 106936100 CATCATTGATGGTCCTGCT 59 106936229 106936248 TACTGAACATATCCGCACAG 59 NA Mus musculus 50 Ldha ENSMUSG00000063229 ENSMUST00000048209,ENSMUST00000107634,ENSMUST00000005051 3 3 3 80 7 54103107 54104352 TTAATGAAGGACTTGGCGG 59 54104396 54104414 CTGGAGATCCATCATCTCG 59 NA Nonspecific Mus musculus 50 Gpr84 ENSMUSG00000063234 ENSMUST00000079824 1 1 1 60 15 103139303 103139321 GATTTCATCTGAGCCAGTC 57 103139261 103139279 TTCTGACGAATCACCTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr763 ENSMUSG00000063374 ENSMUST00000077460 1 1 1 60 10 128449209 128449228 TTACACTCTGAGGAACAAGG 58 128449250 128449269 AAAGTATCTCTTCACGAGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sorcs3 ENSMUSG00000063434 ENSMUST00000078880 2 1 1 80 19 48768426 48768447 TGGCTATGGAGAACATTAAGAG 59 48768488 48778723 CCTTGATACCTGCTACCTC 58 NA Mus musculus 50 1500001A10Rik ENSMUSG00000063919 ENSMUST00000076124 1 1 1 99 5 116903490 116903508 ATTCAGGGAACTCCTTCAC 58 116899628 116903427 TGAAACCCTCTTGACTCTC 58 NA Mus musculus 50 Gm648 ENSMUSG00000064016 ENSMUST00000081133 1 1 1 80 X 53797809 53798164 CTTTGGACGACAATACGGA 59 53797747 53797766 TCGACAAACTGAATCCTGAC 59 NA Mus musculus 50 Zfp69 ENSMUSG00000064141 ENSMUST00000106280,ENSMUST00000106281,ENSMUST00000060000 1 3 4 136 4 120607780 120619894 GGAATCGTTGACTTTCAAGG 59 120607028 120607681 GATATCCTGCCACTGACAC 59 NA Mus musculus 50 Olfr694 ENSMUSG00000064223 ENSMUST00000082091 1 1 1 60 7 113833058 113833079 CCATGTTACCATGTATCTTCTG 58 113833019 113833037 TGATGTGAGAAGCAAGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-30c-1 ENSMUSG00000065490 ENSMUST00000083556 1 1 1 60 4 120442192 120442212 GTGTAAACATCCTACACTCTC 57 120442152 120442170 GAGTAAACAACCCTCTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Arid3c ENSMUSG00000066224 ENSMUST00000084698 3 1 1 147 4 41673301 41673319 ATCTGTATGCGTTGTTTCG 58 41673059 41673190 TTCATGTACTGTGTACGGA 57 NA Mus musculus 50 1700065O13Rik ENSMUSG00000067430 ENSMUST00000087654,ENSMUST00000087658 2 2 2 85 17 33158655 33158675 ACCTTTATGAACCTGATCTCC 59 33156906 33158414 ATCTGAGTTCTCAGACTTCTG 58 NA Mus musculus 50 Ndg1 ENSMUSG00000067750 ENSMUST00000088407 2 1 1 143 1 21340520 21340973 AGGCAAGATGATGCTACTG 59 21341080 21341098 GGAAACCTCAAGAAGTGAG 57 NA DesignNoJunction Mus musculus 50 Zic3 ENSMUSG00000067860 ENSMUST00000088627,ENSMUST00000088631 2 2 3 95 X 55286694 55287559 CACATGAAGGTTCATGAATCTC 59 55287615 55287633 GTTTGCAGAAGCTATAGCG 58 NA Mus musculus 50 5430413K10Rik ENSMUSG00000067996 ENSMUST00000088921 3 1 1 114 2 154142775 154142794 TAACAAAGAATGGAGAGCAC 57 154143028 154143291 TGTTCAGACCTTATGAGCT 57 NA Mus musculus 50 NP_001094901.1 ENSMUSG00000068011 ENSMUST00000112957 2 1 1 196 6 115539368 115539387 CACGTTGGAATCACTAACAC 59 115535579 115536670 TCTTCATACCTATGAGGCAG 58 NA Mus musculus 50 Ndufa12l ENSMUSG00000068184 ENSMUST00000022206 1 1 1 83 13 108881781 108881799 AAAGGATTGTAGAAGCAGC 57 108871576 108881734 TTCTAATCCATGCTTCCCA 58 NA Mus musculus 50 Olfr1298 ENSMUSG00000068641 ENSMUST00000090322 2 1 1 61 2 111485336 111485355 GTTGGACAAGTTTCTTGCTG 59 111485294 111485312 AAATGGCTGGGTTTAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Flnc ENSMUSG00000068699 ENSMUST00000090474,ENSMUST00000090472 1 2 2 80 6 29401786 29402008 TGTTACAGTGTCCATTGGAG 59 29402163 29402181 GTGATCACAGTCTCCTCTC 58 NA Nonspecific Mus musculus 50 Zdhhc11 ENSMUSG00000069189 ENSMUST00000091493 2 1 1 100 13 74102928 74102947 TATCCTGGATCACCTACCTG 59 74103010 74111059 ACCCATCACAATATTGGCA 59 NA Mus musculus 50 OTTMUSG00000000541 ENSMUSG00000069280 ENSMUST00000091719 1 1 1 95 13 23342068 23342086 CAGTGACACATGATTCCAC 58 23342145 23342163 GGACATTCCCAGTGATCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cacng7 ENSMUSG00000069806 ENSMUST00000092891 1 1 1 85 7 3338622 3338995 AATATTCTGAAGACAGTGCG 57 3339043 3339061 ATGTTGCTGATGACAAAGG 58 NA Mus musculus 50 ENSMUSG00000070111 ENSMUSG00000070111 ENSMUST00000093603 1 1 1 60 8 97491824 97491842 CCTGCTTGCCTATCTAACC 59 97491782 97491801 GTTACAGACTTTACTGTGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000070111 ENSMUSG00000070111 ENSMUST00000093603 2 1 1 60 8 97491824 97491842 CCTGCTTGCCTATCTAACC 59 97491782 97491802 GTTACAGACTTTACTGTGCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gmppb ENSMUSG00000070284 ENSMUST00000112295,ENSMUST00000047947 1 2 2 86 9 107952512 107952533 GTGATGTGATATGTGATTTCCC 59 107952580 107952791 CCTTGGTAACCAAGATGGA 58 NA Mus musculus 50 Ndnl2 ENSMUSG00000070520 ENSMUST00000094331 2 1 1 60 7 72017132 72017152 TGGACTATGAATTACAGTGGG 59 72017092 72017111 AGAACTTTCATCTTGCTGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700028K03Rik ENSMUSG00000070631 ENSMUST00000070013,ENSMUST00000058921,ENSMUST00000112665 2 3 3 60 5 107972989 107973009 TTCTGATACACTGGAAAGTGG 59 107973030 107974723 CAACAAGAATGCAACTCCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 OTTMUSG00000009332 ENSMUSG00000070737 ENSMUST00000106097,ENSMUST00000094712 1 2 2 60 4 126805225 126806098 TTGATCCTACTCATGATGGG 58 126806121 126806139 TACTCAGTGGCTCTTTCAG 58 NA DesignNoJunction Mus musculus 50 EG436523 ENSMUSG00000071517 ENSMUST00000095999 3 1 1 84 6 41392814 41393348 CTTAGCTTTGGTGTCAGTG 58 41392748 41392766 GATAGGAGGCTTCACAGTC 59 NA Nonspecific Mus musculus 50 EG546347 ENSMUSG00000071726 ENSMUST00000096371 3 1 1 136 X 89735398 89735416 TGTTACAGGATGTTGAGCC 59 89735516 89735534 CTCAACATCAGGTGTGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2900055J20Rik ENSMUSG00000071860 ENSMUST00000096572 2 1 1 60 18 40416854 40416872 TCTGAATGCCTCTAAGTCC 58 40416894 40416914 CAGATAAATCCTTTGCACCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm75 ENSMUSG00000072575 ENSMUST00000100645 2 1 1 60 14 51736598 51736616 TACAGCTACGTTCAGTTCC 59 51736639 51736658 TTATGTCCTCTATGCTGTCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp9 ENSMUSG00000072623 ENSMUST00000112838 3 1 1 83 6 118415413 118415865 CTGGAAATGCAAGGAAAGG 59 118415348 118415366 TTCCACATTCGCTACAGTC 59 NA Mus musculus 50 1700110I01Rik ENSMUSG00000072741 ENSMUST00000100902 3 1 1 82 14 5042013 5042031 CAGTGAATCAGAGCAGGAG 59 5042077 5070106 ATCAATGCTACTTGGTCCC 59 NA Nonspecific Mus musculus 50 BC061212 ENSMUSG00000072815 ENSMUST00000101013 2 1 1 79 5 96162673 96162691 CAATTGTCTCCAGCATCTC 58 96161715 96162630 TCATCAAGCACCTGAAGAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 EG434019 ENSMUSG00000073045 ENSMUST00000101355 1 1 1 98 6 60032557 60032575 GCATGACGTTCTATGTCAG 58 60033316 60033420 AATAAGCCAAGGACATTGAG 57 NA Mus musculus 50 Zxdb ENSMUSG00000073062 ENSMUST00000101388 2 1 1 300 X 91972627 91972645 TTGGTATGAACCGACTCTG 58 91972906 91972927 CAATCTAACCTAAACCATGTCC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 9030624G23Rik ENSMUSG00000073158 ENSMUST00000101538 3 1 1 114 12 24759574 24759592 GTGCATGTGAACTTCACTG 59 24759276 24759499 AAGTGTAGCCTATAACAGTGAG 59 NA Nonspecific Mus musculus 50 Cyp21a2-ps ENSMUSG00000073419 ENSMUST00000047263 2 1 1 80 17 34859046 34859064 TTCCCATTTACCTGCTTGG 59 34858688 34859002 AGTCCATCTTTCCTTGCAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Nme3 ENSMUSG00000073435 ENSMUST00000024978 2 1 1 164 17 25033856 25033876 CCGACTGGTTAAATACATGAG 58 25034075 25034167 ATTACATTCTTGCCAACCTC 58 NA Mus musculus 50 ENSMUSG00000073607 ENSMUSG00000073607 ENSMUST00000097631 3 1 1 72 18 34381442 34381460 TGAGTCCAAAGCCTATGAC 58 34381388 34381406 CTAGTGGAGTCTACGATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073682 ENSMUSG00000073682 ENSMUST00000088499 1 1 1 60 4 154988441 154988460 GCAGACAGAGTAGTGATGAG 59 154988400 154988418 ATGCTCTTGATTCACACTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Wdr57 ENSMUSG00000074088 ENSMUST00000105994,ENSMUST00000098405 1 2 2 88 4 130039997 130042333 GCTAATACTGTTGTGGAACG 58 130042384 130042402 TATAGTGCAGCTCCATCAC 58 NA Mus musculus 50 Obox2 ENSMUSG00000074372 ENSMUST00000098807 1 1 1 95 7 15982585 15982603 TGGCTTCAAGAAAGTTTCG 58 15982662 15982682 TCTTGTTTGGGTAGCACTC 59 NA Nonspecific Mus musculus 50 Vmn2r-ps105 ENSMUSG00000074834 ENSMUST00000099416 1 1 1 80 13 66455975 66455995 TGCTTCAACAAGTAGAGTCTC 59 66454908 66455933 TCAGCAAGGAAACCATCTG 59 NA Nonspecific Mus musculus 50 ENSMUSG00000074927 ENSMUSG00000074927 ENSMUST00000099561 2 1 1 157 13 42006974 42007425 AAAGCTAGTGGAAAGGCAG 59 42007544 42007564 GCATGCTGAGAATAAATACCC 59 NA InUTR Mus musculus 50 Olfr1181 ENSMUSG00000075125 ENSMUST00000099823 3 1 1 60 2 88264156 88264174 TGCAAGAGGAACGTATCAG 59 88264114 88264132 CTTCAGTGTTCTGCTTGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075403 ENSMUSG00000075403 ENSMUST00000100182 1 1 1 67 16 11036190 11036299 AATTTCCAAGGGACCATCC 59 11036332 11036350 AGAGGAAGACTCTGGAGTG 59 NA DesignNoJunction Mus musculus 50 OTTMUSG00000016805 ENSMUSG00000075416 ENSMUST00000100212 3 1 1 61 2 30570248 30570266 CTCATTCCCTTGTTTCCTG 58 30570205 30570223 CAAGGATCCAGTTACCCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 0610040B10Rik ENSMUSG00000075575 ENSMUST00000087782 3 1 1 60 5 144091145 144091163 GTACGAGTCCTTCGTTCTC 59 144091186 144091205 CACAAGAATCAAATCAAGGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRBV21 ENSMUSG00000076477 ENSMUST00000103278 1 1 1 60 6 41152619 41152754 TATTCTGGACATCAATCCATGG 59 41152774 41152793 CTTTGACCAGATGTCTAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV3-1 ENSMUSG00000076656 ENSMUST00000103465 1 1 1 186 12 115202888 115202987 GGTATCCTGTCTGATGTGC 59 115202720 115202738 TAGTGCTACCACTGTAGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV7D-5 ENSMUSG00000076776 ENSMUST00000103586 1 1 1 60 14 53455810 53455828 GAATCCCTCACTGTCTCAG 59 53455852 53455870 AACGATCACTGAAAGTGCA 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Capns2 ENSMUSG00000078144 ENSMUST00000104947 2 1 1 60 8 95425746 95425764 TACCTGTAGGAGCATTGTG 58 95425788 95425806 CTCAAATCCCAGTTTCCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr614 ENSMUSG00000078624 ENSMUST00000106888 1 1 1 69 7 110700317 110700335 CTACTTCAAATTGGCCCAC 58 110700368 110700386 GAGATCCACATATGTGCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ceacam15 ENSMUSG00000078795 ENSMUST00000108498 1 1 1 80 7 17257545 17258532 TCTCCAAGTATACAAGATCGTG 59 17257486 17257504 AGAATTGAGGCACTCTTCC 59 NA Mus musculus 50 A2ARW4_MOUSE ENSMUSG00000078865 ENSMUST00000108945,ENSMUST00000108943 2 2 2 61 2 177356417 177356438 CTACAAAGATGTGATGGTAGAG 58 177356185 177356398 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 A2ARL5_MOUSE ENSMUSG00000078875 ENSMUST00000108975 1 1 2 81 2 176794502 176794729 CACAGCTATAGGTTACATTTGG 58 176794770 176795350 CAATCGTAACCTTCCATGAC 58 NA Mus musculus 50 0610010B08Rik ENSMUSG00000078888 ENSMUST00000109016,ENSMUST00000109015,ENSMUST00000109014 2 3 3 63 2 175747770 175747788 GAGTCTCTACAAGGGTGTG 59 175747812 175748038 CCAAATGTAACCTATAGCTGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Slc45a4 ENSMUSG00000079020 ENSMUST00000076224 3 1 1 80 15 73414814 73414832 TTGTCTCGATGAGCATCTC 59 73412545 73414770 GACTGTGGTGGACATACTC 59 NA Nonspecific Mus musculus 50 Pglyrp2 ENSMUSG00000079563 ENSMUST00000114456,ENSMUST00000114455,ENSMUST00000114454 3 3 3 167 17 32557857 32560960 ATTACAACTGCTGAAACTGG 58 32555898 32555916 GGATGATGGAGTCCATGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Gm1110 ENSMUSG00000079644 ENSMUST00000115261 3 1 1 80 9 26720919 26720937 CTCTGGGTCATTCTGTGTC 59 26720024 26720875 ATCCTTGAGTAACCAGCTG 58 NA Mus musculus 50 Tom1l2 ENSMUSG00000000538 ENSMUST00000102683,ENSMUST00000093048,ENSMUST00000093046 1 3 8 129 11 60046449 60055327 CAGAAATGATTCCCGTTGC 59 60043719 60043740 CTTTCTTCCAGGAACTTATCGA 59 NA Mus musculus 50 Nfix ENSMUSG00000001911 ENSMUST00000109764,ENSMUST00000099070,ENSMUST00000076715,ENSMUST00000098572,ENSMUST00000109762,ENSMUST00000063596 1 6 6 80 8 87251556 87251575 ACTTAAGTTTCCAGGACTGC 59 87251135 87251515 CAACTGGAGTCTGTGATACTC 59 NA Mus musculus 50 Prkcsh ENSMUSG00000003402 ENSMUST00000115331,ENSMUST00000003493 2 2 2 82 9 21816680 21816698 TCTCCTTTGATTTCGGTCC 59 21816743 21817132 GTAGACGTACTCATTGGTGG 59 NA Mus musculus 50 E130112L23Rik ENSMUSG00000004562 ENSMUST00000089769 2 1 2 63 14 52623380 52623398 TGGACATTAAAGCCCTTGG 59 52623425 52624296 GTTTCTGAGGCTCTTCCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Rasa4 ENSMUSG00000004952 ENSMUST00000100570,ENSMUST00000042135 3 2 2 83 5 136581540 136581558 CTACGGTCATACCATCCTG 58 136581605 136582954 GTCACATCCCTGATCTGTC 59 NA Mus musculus 50 Cugbp1 ENSMUSG00000005506 ENSMUST00000005643,ENSMUST00000068747,ENSMUST00000111452,ENSMUST00000111455,ENSMUST00000111449 3 5 6 126 2 90844908 90844926 AGAACAGAAGAGAATGGCC 59 90845016 90846791 GAGCTGCAAATAAAGTGCT 58 NA Nonspecific Mus musculus 50 Ggtla1 ENSMUSG00000006344 ENSMUST00000072217,ENSMUST00000081083,ENSMUST00000105419 3 3 3 84 10 75065427 75065445 GTGTTGTTAACCCTCAGAG 57 75065493 75065734 ATGATCTCTACCTTGCCTG 58 NA Mus musculus 50 Tek ENSMUSG00000006386 ENSMUST00000073939,ENSMUST00000102798,ENSMUST00000071168 2 3 3 80 4 94504086 94516321 CTTAGTGACATTCTCCCTCC 59 94516363 94516382 TGTCCAAGAAACCATAGCTG 59 NA Mus musculus 50 Hyi ENSMUSG00000006395 ENSMUST00000106393,ENSMUST00000006562 2 2 2 91 4 118034528 118034546 CCCAGTATTTCCTGGACAC 59 118034688 118034807 GTGGAATATGTCCATCTGCA 59 NA Mus musculus 50 Trnt1 ENSMUSG00000013736 ENSMUST00000113247,ENSMUST00000101098 3 2 5 195 6 106724480 106724498 AACTGACTGGCAGAAAGAC 59 106726230 106726457 AATACCTGGCCTGAAATACC 59 NA Mus musculus 50 Pax5 ENSMUSG00000014030 ENSMUST00000107827,ENSMUST00000107826,ENSMUST00000014174,ENSMUST00000102932,ENSMUST00000107825 2 5 5 80 4 44692431 44695549 ACAGCATAGTGTCTACAGG 58 44692369 44692388 CACTGATGGAGTATGAGGAG 58 NA Mus musculus 50 Prdm15 ENSMUSG00000014039 ENSMUST00000095849,ENSMUST00000113740 1 2 2 80 16 98016260 98017271 CAGAGTATCCAACAGGTGG 59 98016198 98016217 GATGTTGGTTAGACCAACTG 58 NA Mus musculus 50 Trpv4 ENSMUSG00000014158 ENSMUST00000112225,ENSMUST00000071968,ENSMUST00000112222 3 3 3 103 5 115080908 115083158 AACAGCAAGATCGAGAACC 59 115080823 115080842 TTGATGTAGAAGGACACAGC 59 NA Mus musculus 50 Ptgds ENSMUSG00000015090 ENSMUST00000114251,ENSMUST00000015234,ENSMUST00000114259 3 3 3 90 2 25323396 25323414 GCTGAAGGAGAAATTCACC 58 25322852 25323342 TTGAATGCACTTATCCGGT 59 NA Mus musculus 50 Hnrnpl ENSMUSG00000015165 ENSMUST00000098622,ENSMUST00000038572 3 2 2 115 7 29599090 29599109 CCCATCTACTCCATAACCAC 59 29599296 29600126 GAATCAAACTCCACCATAGC 58 NA Mus musculus 50 Mtmr1 ENSMUSG00000015214 ENSMUST00000114595 2 1 8 82 X 68623037 68623056 TTCAGGTTCAGTGACATCAG 59 68630083 68632204 GTTCTTCCTCTAGCTCCCT 59 NA Mus musculus 50 Kcnq2 ENSMUSG00000016346 ENSMUST00000103049 3 1 10 85 2 180826987 180831663 ATCACCAAGTAAAGGCAGAC 59 180823253 180823274 GATCTTTCAAACTGACCTTCTG 59 NA Mus musculus 50 Gsdma2 ENSMUSG00000017211 ENSMUST00000093938 1 1 2 135 11 98510956 98512166 ACATGGAGAGGAAACTGTC 58 98512265 98512283 GAAATTGCGTTGCTAGCTC 59 NA Mus musculus 50 Lhx1 ENSMUSG00000018698 ENSMUST00000018842,ENSMUST00000108082,ENSMUST00000092827 1 3 3 69 11 84335589 84335607 CCTGAGTAACAGCAGTGTC 59 84335445 84335463 TAAACTAGGGTCACTGCCT 59 NA DesignNoJunction Mus musculus 50 Zfp687 ENSMUSG00000019338 ENSMUST00000107244 1 1 2 87 3 94814025 94814043 GGGTAACTTCCTACAAGCT 58 94812830 94813974 GGTGAGTGTTCTGTATCCT 58 NA Mus musculus 50 Adarb1 ENSMUSG00000020262 ENSMUST00000098374,ENSMUST00000105406,ENSMUST00000095501 1 3 6 85 10 76775146 76775165 GGAGACGCCAGAATATTCTC 59 76774007 76775099 CTATCTGCTGGTTCTGTCAG 59 NA Mus musculus 50 Pdlim4 ENSMUSG00000020388 ENSMUST00000018755,ENSMUST00000093109 3 2 2 70 11 53873446 53873464 GATCCACATTGACCCTGAG 59 53869781 53869799 TAATCCCAGAGACTGAGGA 58 NA DesignNoJunction Mus musculus 50 Myocd ENSMUSG00000020542 ENSMUST00000108695,ENSMUST00000092999,ENSMUST00000101042 3 3 4 107 11 64996982 64998000 TTCATCCAAAGATGACTGGT 58 64996894 64996913 GGGTGATATCTGAAACTGCT 59 NA Mus musculus 50 Sh3yl1 ENSMUSG00000020669 ENSMUST00000110881,ENSMUST00000020997 3 2 3 159 12 31607195 31609632 GATAAGATCATTCCTGCCCA 59 31611686 31611704 CTATCCCAATGGCTGAAGG 59 NA Mus musculus 50 Dlg4 ENSMUSG00000020886 ENSMUST00000108588 1 1 5 120 11 69840434 69840452 TACCAAGATGAAGACACGC 59 69843946 69844115 TTCCGTTCACATATCCTGG 59 NA Mus musculus 50 Myh10 ENSMUSG00000020900 ENSMUST00000102611,ENSMUST00000092984 3 2 4 121 11 68558904 68565446 AAGGACCATAATATTCCTGGG 58 68565529 68573258 ATAAACTTGCCAAAGCGAG 58 NA Mus musculus 50 Mta1 ENSMUSG00000021144 ENSMUST00000109727,ENSMUST00000109726,ENSMUST00000009099,ENSMUST00000109723,ENSMUST00000069690 2 5 5 78 12 114361438 114364996 GAAAGAAGGTGAGGAGGAC 59 114365038 114365056 ATCCACAAGTGGATTGTGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 2310016C16Rik ENSMUSG00000021760 ENSMUST00000022282 1 1 1 132 13 113835703 113835721 AACTACGGAGTCACATTCC 58 113833457 113833475 GGTTGACCAGATACTTCCA 58 NA DesignNoJunction Mus musculus 50 Oxsm ENSMUSG00000021786 ENSMUST00000022311,ENSMUST00000112625,ENSMUST00000112624 3 3 3 82 14 17074358 17074376 TTTGGGTTATGGACTCTCG 58 17073574 17074312 CAGCCATGCATCTTAAAGC 59 NA Mus musculus 50 Slc22a17 ENSMUSG00000022199 ENSMUST00000078122,ENSMUST00000050772,ENSMUST00000111469 3 3 3 81 14 55526930 55527105 TTCACCAACTTTATTGCCC 58 55526867 55526886 ACAAGTAGAAGTCTGATGGG 58 NA Mus musculus 50 4930562C15Rik ENSMUSG00000022518 ENSMUST00000100211,ENSMUST00000023160 1 2 2 71 16 4851530 4851548 TATTAACCTCCAGAAGGCC 58 4851884 4851902 ATCGTATCTATCTGGTGGC 58 NA DesignNoJunction Mus musculus 50 Bbx ENSMUSG00000022641 ENSMUST00000066037 3 1 7 82 16 50247957 50262536 CACCAGAGATATCTTCAAGGA 58 50247895 50247914 CTCTGCAAACTGAAACAAGG 59 NA Mus musculus 50 Arl13b ENSMUSG00000022911 ENSMUST00000114319,ENSMUST00000089289 3 2 3 82 16 62806468 62811689 GTTAAGGGAAGAAAGAGAACG 58 62806406 62806424 CAAGAACTGGTCCTGAGTC 59 NA Mus musculus 50 Pde10a ENSMUSG00000023868 ENSMUST00000115715,ENSMUST00000115724,ENSMUST00000089085,ENSMUST00000115720,ENSMUST00000024647,ENSMUST00000115718,ENSMUST00000115717 2 7 7 130 17 9123413 9134013 GAGTGCAATAATAGCCTGTG 58 9134106 9134124 AACGTCTTCCTAGACTTGG 58 NA Mus musculus 50 Svil ENSMUSG00000024236 ENSMUST00000025079 1 1 3 80 18 5088744 5088762 CAGTATACCCAGAAGTCCT 57 5088806 5090796 GAAGATGTCAACTTGGGAG 57 NA Mus musculus 50 Esco1 ENSMUSG00000024293 ENSMUST00000115863 1 1 5 80 18 10582097 10582115 CCAGAAGATGAAACACAGC 58 10577740 10582055 GTGATTAATGAGCAGAACCAC 59 NA Mus musculus 50 Cndp2 ENSMUSG00000024644 ENSMUST00000025546,ENSMUST00000097500 2 2 2 81 18 84840195 84840214 CCACATTGACTTCGATATGG 58 84839342 84840151 CAGGATGTCTTTCTTGCAG 58 NA Mus musculus 50 Dntt ENSMUSG00000025014 ENSMUST00000112200 2 1 2 81 19 41130319 41133559 TATGACAGGACTAAGAGGG 57 41133604 41133622 GTTCAATGTAGTCCAGTCC 57 NA Mus musculus 50 Sfxn3 ENSMUSG00000025212 ENSMUST00000062213,ENSMUST00000111954 2 2 3 99 19 45126912 45126931 GTGATCATGAACACTCTGGA 59 45128202 45128802 CAAATACCAAGCAGAAGCC 59 NA Mus musculus 50 Inpp5a ENSMUSG00000025477 ENSMUST00000106098,ENSMUST00000026550,ENSMUST00000097975 2 3 3 81 7 146663930 146663948 CACTGCCAAGAATTTGGAG 59 146663990 146667547 CACTGGATAGTAGTTCTTTGAC 58 NA Mus musculus 50 Zdhhc3 ENSMUSG00000025786 ENSMUST00000026892,ENSMUST00000111488 1 2 2 113 9 122989596 122992678 GAAGAAGACTGGACAAAGTG 58 122989502 122989520 CCCAAACATCACTGATGTG 58 NA Nonspecific, InUTR Mus musculus 50 Sema4c ENSMUSG00000026121 ENSMUST00000114992,ENSMUST00000114991,ENSMUST00000027295,ENSMUST00000114990,ENSMUST00000114995 3 5 5 81 1 36610613 36610632 CTTCAGCCATACAATTCCTC 58 36610403 36610569 TGAGCATGTTGATGTAGGT 58 NA Mus musculus 50 Ilkap ENSMUSG00000026309 ENSMUST00000113031 2 1 2 137 1 93275068 93275086 TCTGTGCCTGATATCAGAC 58 93272104 93272901 TTGTCTAGGAACCTCAAGG 58 NA Mus musculus 50 Epb4.1l5 ENSMUSG00000026383 ENSMUST00000052404 1 1 2 80 1 121446583 121447107 ATTATTCCACAGAGTGCTACC 59 121446523 121446543 CTGACTACATTCATCTGTCCC 59 NA Mus musculus 50 Ralgps2 ENSMUSG00000026594 ENSMUST00000063199,ENSMUST00000027886 1 2 2 80 1 158749989 158750009 GGAGCTGTTACTATTCAAGGT 59 158747950 158749947 TGTCCAAGATGCTACTGTG 59 NA Mus musculus 50 Ush2a ENSMUSG00000026609 ENSMUST00000061932,ENSMUST00000060479,ENSMUST00000027905 2 3 3 87 1 190142894 190142915 GCATTTGATACAAGAACTCTCC 59 190142960 190174924 GCTCTGAACCATTTAAACTCTG 59 NA Mus musculus 50 Mosc1 ENSMUSG00000026621 ENSMUST00000110992 3 1 2 105 1 186625909 186627104 ATAATGAAGTGGCCTACTCAG 59 186625824 186625842 AAGTTTGTCGCTTTCACTC 58 NA Mus musculus 50 Dclre1c ENSMUSG00000026648 ENSMUST00000100463,ENSMUST00000102988,ENSMUST00000100462,ENSMUST00000061852,ENSMUST00000115069 3 5 7 104 2 3346595 3346614 CCAAAGTACAGATTCTGGGA 59 3351074 3353724 AACAACCTCTTCCTTCTCAC 59 NA Mus musculus 50 Gapvd1 ENSMUSG00000026867 ENSMUST00000102800,ENSMUST00000113111,ENSMUST00000028224,ENSMUST00000113099,ENSMUST00000113109 2 5 7 80 2 34555416 34556290 GCCTAAAGCTCCTATACCA 58 34555354 34555372 GTTGAGAATCTGTCAGGAC 57 NA Mus musculus 50 Lhx6 ENSMUSG00000026890 ENSMUST00000112960,ENSMUST00000112963,ENSMUST00000112961 3 3 7 82 2 35942981 35946492 CTACATTGAGAGTCAGGTACAG 59 35942920 35942938 AATCAGCTTTGAGGTGGAC 59 NA Mus musculus 50 Egfl7 ENSMUSG00000026921 ENSMUST00000080087,ENSMUST00000102906,ENSMUST00000102907,ENSMUST00000100290 3 4 4 131 2 26447239 26447646 GCTAGAACAGAAACTGCAG 58 26447741 26447759 AGTGAATCAATTCGGTCCA 58 NA Mus musculus 50 Camsap1 ENSMUSG00000026933 ENSMUST00000097831 2 1 5 119 2 25808328 25821190 TCAATAAGGTCCGTTATCGG 59 25808228 25808246 AGTGAACCACTGCTAAGAG 58 NA Mus musculus 50 Grin1 ENSMUSG00000026959 ENSMUST00000114312,ENSMUST00000114307,ENSMUST00000114318,ENSMUST00000114314,ENSMUST00000114317,ENSMUST00000114310,ENSMUST00000028335,ENSMUST00000114308 3 8 8 81 2 25159300 25159318 TGACAGGAAGATCATCTGG 58 25154047 25159258 TGTCACTATCTTTAGTCTGGTG 59 NA Mus musculus 50 Dnmt3b ENSMUSG00000027478 ENSMUST00000103151,ENSMUST00000109772,ENSMUST00000088976,ENSMUST00000103150 2 4 10 120 2 153504282 153512001 GGAATGAACAGGATCTTCG 57 153512085 153512103 CAAACAGGTGTCTGATGAC 58 NA Mus musculus 50 Pcmtd2 ENSMUSG00000027589 ENSMUST00000108755 1 1 2 86 2 181581268 181581287 TGCAGAAAGAACATGAAGAG 58 181581334 181586296 GGTCAACTATCTTCTCTTCCA 58 NA Nonspecific Mus musculus 50 Ttc14 ENSMUSG00000027677 ENSMUST00000108206 2 1 5 91 3 33703380 33703398 CATGTGGATGCTATGAACG 58 33703452 33705746 TCTTCTAACAATGCTCCTCG 59 NA Mus musculus 50 Sucnr1 ENSMUSG00000027762 ENSMUST00000029326 2 1 1 60 3 59890493 59890511 TTCTGGAAACCCTGAACAC 59 59890535 59890553 TAGGAAGCCCAACAAAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc27a3 ENSMUSG00000027932 ENSMUST00000029541,ENSMUST00000090883 1 2 2 169 3 90190406 90190424 CATCTATGGAGTCACGGTG 59 90189440 90190174 TAGTGGCCAAAGATTCCTG 59 NA InUTR Mus musculus 50 Trp53inp1 ENSMUSG00000028211 ENSMUST00000029865,ENSMUST00000108326 3 2 2 87 4 11091639 11091658 AAGTCACTACTTCTTCCAGC 59 11091707 11092246 GGGCAGGTATCTATGAAGTC 59 NA Mus musculus 50 Spaca1 ENSMUSG00000028264 ENSMUST00000029927 1 1 3 89 4 34115525 34116053 ATCATCATAAATTGGGCGG 57 34115454 34115472 ATACCTCATAGAGCTCAGC 57 NA Mus musculus 50 Cyp2j13 ENSMUSG00000028571 ENSMUST00000030305,ENSMUST00000097973,ENSMUST00000097972 1 3 4 185 4 95725810 95728601 GAAATGGCAAAGTACCCAG 58 95723620 95723639 AATCACTCGGTCAATTTCAG 58 NA Mus musculus 50 Echdc2 ENSMUSG00000028601 ENSMUST00000052999,ENSMUST00000116309,ENSMUST00000106695,ENSMUST00000106694,ENSMUST00000106693,ENSMUST00000116308,ENSMUST00000106692,ENSMUST00000030338,ENSMUST00000116307 3 9 10 144 4 107842373 107842469 GTGTTTGTTAGTGAGCTGC 59 107844717 107844735 CCTCCACATCACTCATCTG 59 NA Mus musculus 50 Rragc ENSMUSG00000028646 ENSMUST00000072215,ENSMUST00000030399 2 2 2 219 4 123607117 123607135 GATGGCCATTATCAAGCTG 58 123612875 123612893 TTTCAGACTTGGAGCACTG 59 NA DesignNoJunction Mus musculus 50 Eif2b3 ENSMUSG00000028683 ENSMUST00000106448,ENSMUST00000106447,ENSMUST00000070610 3 3 4 80 4 116741362 116741381 TATCTGTTCTTTGTCCGGAG 59 116741424 116743259 GGCTATCAGCTCCAATCAG 59 NA Mus musculus 50 Nadk ENSMUSG00000029063 ENSMUST00000030939,ENSMUST00000105613,ENSMUST00000105612,ENSMUST00000097745 2 4 4 80 4 154959300 154959319 GAAGACCCTGCTATAGTGAG 58 154959361 154959483 GTCATCATAGTCTTCACGGA 58 NA Mus musculus 50 Tbc1d14 ENSMUSG00000029192 ENSMUST00000101273,ENSMUST00000031094,ENSMUST00000087550 3 3 3 82 5 36867686 36885834 ACCCAGAAGGAATATGAAGAC 59 36867624 36867643 AAATCCAGGTTCTTCCTCAC 59 NA Mus musculus 50 Phf14 ENSMUSG00000029629 ENSMUST00000115511,ENSMUST00000115510,ENSMUST00000115514,ENSMUST00000090632 2 4 4 80 6 11912719 11912737 TGTGTAGAGCCTATTTCCA 57 11912780 11936351 CTGCTATATCCTCTTCTGCT 58 NA Mus musculus 50 Abcg2 ENSMUSG00000029802 ENSMUST00000031822,ENSMUST00000114294 3 2 2 81 6 58640602 58642245 CAGCTATGCAATATGTACTGG 58 58642288 58642306 ATGATTCTTCCACAGTCCC 58 NA Mus musculus 50 Herc3 ENSMUSG00000029804 ENSMUST00000041401 2 1 3 102 6 58866575 58866779 GAAGAGCTGGAAGAGACTG 59 58866845 58866863 TCTTCTCCAATGGGAACTC 58 NA Mus musculus 50 Clcn1 ENSMUSG00000029862 ENSMUST00000114686 1 1 3 113 6 42242998 42243017 TGTTCTCTGGTGTCTATGAG 58 42243517 42244091 GTAATAGTATGGCTGCTCCA 58 NA Mus musculus 50 Ephb6 ENSMUSG00000029869 ENSMUST00000031903,ENSMUST00000114732 1 2 3 80 6 41569309 41569327 GCTTTGGCATACTCATGTG 59 41569370 41569615 CATTTAGTACCTCCTGCTCG 59 NA Mus musculus 50 Bcat1 ENSMUSG00000030268 ENSMUST00000111742,ENSMUST00000116504,ENSMUST00000032402,ENSMUST00000087468 1 4 4 80 6 144952924 144952942 CTGCATATTCCAACGATGG 58 144948816 144952883 CCTTCCATACTGGATATCAGTC 59 NA Mus musculus 50 Tdrd12 ENSMUSG00000030491 ENSMUST00000108043,ENSMUST00000032701 3 2 2 84 7 36290052 36290070 GGATTCCTTGACAGACTCG 59 36289241 36290004 TTCAGTACACTTCTCCGTG 58 NA Mus musculus 50 Apba2 ENSMUSG00000030519 ENSMUST00000032732,ENSMUST00000107507,ENSMUST00000096173 1 3 3 94 7 71890694 71894997 GAATGGAATCATCTGCAGC 58 71895055 71895073 CACTCTGTCCGTTGATCTC 59 NA Mus musculus 50 Sytl2 ENSMUSG00000030616 ENSMUST00000107211 3 1 4 95 7 97533624 97533645 AGTCTAGAAGACATTCCATCAG 59 97536058 97540879 CACTGTGGAAACATCTTCAG 58 NA Mus musculus 50 Dgat2 ENSMUSG00000030747 ENSMUST00000033001 1 1 1 60 7 106307343 106307361 GAGTACCTGATGTCTGGAG 58 106306796 106306815 AGAGCAAGTAGTCTATGGTG 58 NA DesignNoJunction Mus musculus 50 Uros ENSMUSG00000030979 ENSMUST00000106145,ENSMUST00000106146,ENSMUST00000033276 3 3 4 80 7 140881357 140882204 ACTATGAAGATCAGGGTATCC 58 140881297 140881315 CCTGAATATACTCGAGGCT 57 NA Mus musculus 50 Phka2 ENSMUSG00000031295 ENSMUST00000112377,ENSMUST00000112380,ENSMUST00000033652 3 3 4 80 X 157012599 157012617 AAGTTCTAAGTGGACACCG 59 157012660 157013727 AGTCATATTCAGGAGTCGTC 58 NA Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112408,ENSMUST00000112406,ENSMUST00000112402,ENSMUST00000112400 1 4 10 103 X 156896802 156899280 AATGGTACACCAGATGCTG 59 156903541 156903561 GAGTCATTGCAAAGAGATGAC 59 NA Mus musculus 50 Flna ENSMUSG00000031328 ENSMUST00000114299,ENSMUST00000033699,ENSMUST00000101454,ENSMUST00000114288,ENSMUST00000114289,ENSMUST00000114298 1 6 7 80 X 71475726 71475853 CAAGTTACAGCTTTGGCTG 59 71475664 71475684 ATAGTTATACTGTGGAGCCAG 58 NA Mus musculus 50 Mtm1 ENSMUSG00000031337 ENSMUST00000101501 3 1 7 94 X 68512918 68512937 TTTGCATTGAAGCAAGAAGG 59 68512993 68513755 TTCAGGTTAGCCAGATTGTG 59 NA Mus musculus 50 Cetn2 ENSMUSG00000031347 ENSMUST00000114550,ENSMUST00000114551 3 2 3 190 X 70161729 70162042 CATCAAAGAACTGAAGGTGG 58 70160271 70160290 ACAACTTGAAAGCTTTCAGG 58 NA Mus musculus 50 Rbm41 ENSMUSG00000031433 ENSMUST00000087400 1 1 5 82 X 136502789 136502807 AAATCGTTTGTCAGAGGAG 57 136489512 136502744 CTTTCTTCTCCTTGTTTGGT 57 NA Mus musculus 50 Cd3e ENSMUSG00000032093 ENSMUST00000102832 1 1 1 63 9 44810221 44810239 TTGTACCTGAAAGCTCGAG 59 44809185 44809203 TTATGGCTACTGCTGTCAG 59 NA DesignNoJunction Mus musculus 50 Kif23 ENSMUSG00000032254 ENSMUST00000034815 1 1 2 80 9 61767496 61767696 AGAATTGCCAACTGGTAGTC 59 61767435 61767454 GTCCATTCAGACTCTGTACC 59 NA Mus musculus 50 Eomes ENSMUSG00000032446 ENSMUST00000035020 3 1 2 80 9 118391404 118393401 CTACGATTCCATGTACACG 57 118393444 118393463 ACAATCTGATGGGATCTAGG 58 NA Mus musculus 50 Cck ENSMUSG00000032532 ENSMUST00000060307 1 1 2 164 9 121402602 121402620 TTAACCTGGACCAGTAGAG 57 121399289 121399307 TTCTTAAGAACGGACATGC 57 NA DesignNoJunction, InUTR Mus musculus 50 Lmo2 ENSMUSG00000032698 ENSMUST00000111143,ENSMUST00000111140,ENSMUST00000040619 3 3 4 113 2 103816330 103816348 CCTCTACTACAAGCTGGGA 59 103821079 103821097 ATCGTCATCTCATAGGCAC 58 NA DesignNoJunction Mus musculus 50 Ap4b1 ENSMUSG00000032952 ENSMUST00000076599,ENSMUST00000106824,ENSMUST00000047285 2 3 4 88 3 103619231 103621687 CATCTTCGCCATAGGTAGC 59 103621738 103621757 TATGTTCTTGTCGAAGTCCC 59 NA Mus musculus 50 Armcx1 ENSMUSG00000033460 ENSMUST00000035748 3 1 6 193 X 131252984 131253266 CGACCTGCATATAAGTGGA 58 131253522 131254176 CTCTTGCAGATTTGATTCTGG 59 NA InUTR Mus musculus 50 Mrcl ENSMUSG00000033633 ENSMUST00000109180,ENSMUST00000039597 2 2 2 159 8 113595579 113595897 ATTTCTGGATTGGGCTCAC 59 113594626 113594644 TCATTCCAGTTGAAGGCAG 59 NA Mus musculus 50 Fhod3 ENSMUSG00000034295 ENSMUST00000037097,ENSMUST00000115820 2 2 4 136 18 25181360 25181378 TCCAACCATAGACAAGCTG 59 25181477 25186582 TGCTGAAATTGCTGTATCTG 58 NA Mus musculus 50 4632417N05Rik ENSMUSG00000034308 ENSMUST00000037955 3 1 1 163 8 120195109 120195127 CCTGGCACTAGGATAACAG 59 120187682 120187701 ATGTCAAACAGAATCACACG 58 NA DesignNoJunction, InUTR Mus musculus 50 Brip1 ENSMUSG00000034329 ENSMUST00000044423,ENSMUST00000100673 2 2 3 80 11 85948917 85952279 ATCAGTAACTCACAGGTTTGG 59 85948857 85948875 AGTATGCTGAAAGGTAGCG 59 NA Mus musculus 50 Setmar ENSMUSG00000034639 ENSMUST00000049246 1 1 1 60 6 108026017 108026038 TATACCCAAGGGAAGATTTGTC 59 108026057 108026077 CACTTCAGAGAATCCTAACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Unc13a ENSMUSG00000034799 ENSMUST00000030170 3 1 2 131 8 74163623 74163641 AATGGAGAAGACCATCGTC 59 74159112 74160441 ATCATTTGTGTCCCGTCTG 59 NA Mus musculus 50 Pip5k1c ENSMUSG00000034902 ENSMUST00000045469,ENSMUST00000105327,ENSMUST00000105326 1 3 3 80 10 80769161 80770239 TGACTATTTGTACTCCCTGTG 59 80770281 80770299 GTGACGTAGAAGACAGAGC 59 NA Mus musculus 50 Gnptg ENSMUSG00000035521 ENSMUST00000038973 3 1 2 121 17 25372203 25372303 CCACTCTTTGTTAGTGTATCC 58 25372032 25372050 GTACCCTTAGCAACTTCTC 57 NA Mus musculus 50 Prkx ENSMUSG00000035725 ENSMUST00000036333,ENSMUST00000114044 3 2 2 81 X 75027428 75027447 AACATCCTTCTAGACAGGGA 59 75018564 75027384 GAGTCCATGTCCTATCCAC 58 NA Mus musculus 50 6720456H20Rik ENSMUSG00000036339 ENSMUST00000111732,ENSMUST00000111735,ENSMUST00000037990 2 3 3 80 14 49125025 49125044 GATTGTATTCAACCCAGAGG 57 49125086 49126826 GGACCAAATCTTTCATAGGC 58 NA Mus musculus 50 Plxnb2 ENSMUSG00000036606 ENSMUST00000109331,ENSMUST00000060808 1 2 3 82 15 88992547 88992694 AGTTCACTTATCAACAACCC 57 88992484 88992502 ATTGATGGTCAATGTGGTG 57 NA Mus musculus 50 D530005L17Rik ENSMUSG00000038070 ENSMUST00000047023 2 1 3 80 4 84713468 84713569 CCTGCCAGAGTTAACAGAG 59 84713612 84713631 CCGTTCTCGTAATGAAATGG 58 NA Mus musculus 50 Mlxip ENSMUSG00000038342 ENSMUST00000111596,ENSMUST00000068237 1 2 2 82 5 123893137 123893155 AGAATTCAGCGACACTCTC 59 123893200 123893893 CCAGATGTGCTATTTCTCGT 59 NA Mus musculus 50 Tbkbp1 ENSMUSG00000038517 ENSMUST00000092755,ENSMUST00000107615,ENSMUST00000107614,ENSMUST00000066078 1 4 5 97 11 96998978 96999943 CCATCAACCTACTGATGGAG 59 96998900 96998918 GATGAGAGCATCATCTGGG 59 NA Mus musculus 50 Scube3 ENSMUSG00000038677 ENSMUST00000043503,ENSMUST00000074355 2 2 2 80 17 28305156 28305174 CTGGATCAACTTCAAGACC 57 28305218 28305336 TCATAGTCCTCATCGTAGG 57 NA Mus musculus 50 Rtel1 ENSMUSG00000038685 ENSMUST00000054622,ENSMUST00000098971,ENSMUST00000108815,ENSMUST00000108814 1 4 7 88 2 181090179 181090197 GATGATGACCTGGACAAGG 59 181090249 181090365 ATGCCAAATCTCTGTAGCA 58 NA Mus musculus 50 Akap2 ENSMUSG00000038729 ENSMUST00000098065,ENSMUST00000107600,ENSMUST00000071723,ENSMUST00000107599,ENSMUST00000098064,ENSMUST00000107598 3 6 14 88 4 57896063 57905749 GATGATAGTAGTGTCCTGGAG 58 57905799 57905817 TGGTTAGCGTAAATCCCTG 59 NA Mus musculus 50 Ube2h ENSMUSG00000039159 ENSMUST00000094543 1 1 2 89 6 30171789 30210945 CAAGTCTCCATCTATAGATCTTACC 59 30171724 30171743 CCATTGAGAGGATCTATGGG 59 NA Nonspecific Mus musculus 50 4931408A02Rik ENSMUSG00000039903 ENSMUST00000099548,ENSMUST00000037539 1 2 3 84 16 90890852 90890870 AATTACCACTTCGGAAGCC 59 90890916 90894840 TGAGTATGTTCTTGGGAACAC 59 NA Mus musculus 50 Bat2d ENSMUSG00000040225 ENSMUST00000028016,ENSMUST00000046646 1 2 3 80 1 164639030 164639049 AGTCCTATATGGATCCTCGA 58 164638090 164638987 TAGGAGGAATCATTCCAGG 57 NA Mus musculus 50 Klhl32 ENSMUSG00000040387 ENSMUST00000108217 3 1 6 104 4 24577315 24609207 TGGCAGTTAATACACTCCAC 59 24577230 24577248 TGCTTTGGTGGTATTCCAG 59 NA Mus musculus 50 Pla2g5 ENSMUSG00000041193 ENSMUST00000030524 3 1 4 82 4 138356449 138356469 AACTTCCTCCTAATGTCCG 58 138356385 138356404 ACATCAGGAATACAGCAGAG 59 NA Mus musculus 50 Atf4 ENSMUSG00000042406 ENSMUST00000109605,ENSMUST00000044156 3 2 2 127 15 80086860 80086878 GAAACCTCATGGGTTCTCC 59 80087080 80087099 TCTCCAACATCCAATCTGTC 59 NA DesignNoJunction Mus musculus 50 Agps ENSMUSG00000042410 ENSMUST00000111952,ENSMUST00000047232,ENSMUST00000111951 3 3 3 80 2 75706457 75715533 TATGGGATCTGAAGGAACTC 58 75715576 75715594 CCGTACTTCTGGTACTCAG 58 NA Mus musculus 50 Kcnj12 ENSMUSG00000042529 ENSMUST00000041944,ENSMUST00000108717 2 2 3 113 11 60880438 60882634 CTAAACAAGCCCATGAAGTG 59 60882710 60882728 ATGATACGATGCTGTAGGG 58 NA Mus musculus 50 Asxl1 ENSMUSG00000042548 ENSMUST00000036193 1 1 2 150 2 153177995 153182808 TGAAGGAAATGAGCAGTGG 59 153217272 153217290 TTTCTAGACCACTGCACTG 59 NA Mus musculus 50 Cux2 ENSMUSG00000042589 ENSMUST00000111752,ENSMUST00000086317 3 2 2 121 5 122314918 122315869 AGAAGAAAGCCTATCTGAAGC 59 122314817 122314835 CATGAGACTCAACTCCTGG 59 NA Mus musculus 50 Pnpla1 ENSMUSG00000043286 ENSMUST00000056866,ENSMUST00000114737 2 2 2 80 17 29022581 29023800 TAGCAAACTGAAGTCTGCA 59 29023842 29023862 GGATGAGGTTTATAGGTGACC 59 NA Mus musculus 50 Casc1 ENSMUSG00000043541 ENSMUST00000111728,ENSMUST00000057366 1 2 4 80 6 145123838 145125866 TCATCAACAATAAGGTGAGGG 59 145123778 145123796 TGTCACCACTGAACATGAG 59 NA Mus musculus 50 A330049M08Rik ENSMUSG00000043924 ENSMUST00000105859,ENSMUST00000105858,ENSMUST00000105860,ENSMUST00000064481,ENSMUST00000105857 2 5 5 86 4 134927866 134932913 GTATAAGAGCTCTGGAGCC 58 134927798 134927817 TACATCTTCAGCAGGATCAG 58 NA Mus musculus 50 9130011J15Rik ENSMUSG00000044600 ENSMUST00000058733 1 1 1 70 8 75093870 75093888 AAGAATCGAAGGAACCCAG 59 75092799 75092817 GATCCGGAAATACCTCAGG 59 NA DesignNoJunction Mus musculus 50 Mtus1 ENSMUSG00000045636 ENSMUST00000059115,ENSMUST00000093534,ENSMUST00000051379 1 3 5 89 8 42087721 42087739 TTATACACCGCAGAGTGTG 59 42086212 42087668 GTTGTCAAACTGCTCTTGC 59 NA Mus musculus 50 Smtnl2 ENSMUSG00000045667 ENSMUST00000108500,ENSMUST00000050226,ENSMUST00000054338 2 3 3 69 11 72213859 72213877 AACAGATCCTGCTAGAGTG 58 72213505 72213523 GAGAAATTCTGCAGGTCCA 59 NA DesignNoJunction Mus musculus 50 Il17c ENSMUSG00000046108 ENSMUST00000050963 3 1 1 87 8 124946215 124946233 CTCTAGCTGGAACACAGTG 59 124946283 124946302 TATCTCCATGGTGAGATGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Taf9b ENSMUSG00000047242 ENSMUST00000113495,ENSMUST00000055497 2 2 2 124 X 103414928 103414946 CTATCAAGAACGCTCCGAG 59 103413772 103414241 TGTAGTCACATATCGGAAAGC 59 NA Mus musculus 50 BC055004 ENSMUSG00000047592 ENSMUST00000110930,ENSMUST00000110929,ENSMUST00000059879 2 3 3 60 5 138680708 138680726 GGAAGTAACCTAGAAGCCA 58 138680750 138680768 CGTGAACTTTAGCTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 D8Ertd457e ENSMUSG00000047710 ENSMUST00000051870 2 1 1 60 8 13878820 13878839 CATCTAAACCTGTTCAACCT 57 13878861 13878880 GGTGATACAGAAGGTATTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Lrrc49 ENSMUSG00000047766 ENSMUST00000114034 2 1 2 166 9 60534990 60535626 CAAATAACGTGAACTGTGGAC 59 60527965 60532846 ACTAATGTGGTCACCTTGC 59 NA Mus musculus 50 Neurod4 ENSMUSG00000048015 ENSMUST00000061571 2 1 1 60 10 129707518 129707536 AGACCTGAGCTATGATTCC 58 129707476 129707495 GAAGATCGTATTGAGCTGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem81 ENSMUSG00000048174 ENSMUST00000058167 2 1 1 60 1 134404642 134404661 AAGTTAATCTGGACAATGGG 57 134404684 134404702 GATGTCACTTTCCTTTGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nags ENSMUSG00000048217 ENSMUST00000055409 3 1 1 102 11 102008847 102009130 TTAGTAACAAGGGCTGTGG 59 102009196 102009214 TTGACTAGGTTCACTAGGC 58 NA Mus musculus 50 2410014A08Rik ENSMUSG00000048578 ENSMUST00000112121 2 1 2 87 5 115598147 115600086 CAGTAGACGGTGATGTACC 59 115598078 115598097 CCCTCATCATATTCCTCCTC 58 NA Mus musculus 50 Mex3d ENSMUSG00000048696 ENSMUST00000105350,ENSMUST00000099480,ENSMUST00000062946 3 3 3 82 10 79844951 79844969 GGAAGAGATTGAGGCTCAC 59 79844887 79844905 TACCATTGGCATGGAAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tor1aip2 ENSMUSG00000050565 ENSMUST00000065673,ENSMUST00000060404,ENSMUST00000111757 1 3 3 92 1 157910743 157910761 GAGACAGAGTTGGTGAAGG 59 157910817 157911841 AAACACGGAACCATAGGTC 59 NA Mus musculus 50 AI314180 ENSMUSG00000050812 ENSMUST00000107557 1 1 6 109 4 58898361 58917885 GATTGTAGAGATCAGCTCGA 58 58898271 58898289 AGTTTGAGCAGAACAGGAG 59 NA Mus musculus 50 Btla ENSMUSG00000052013 ENSMUST00000114589 1 1 3 81 16 45224543 45224561 CATCCTTTGTGAGAAAGCT 57 45242844 45244276 GTCAGATACTGTTATTAGTGGG 57 NA Mus musculus 50 Dlg2 ENSMUSG00000052572 ENSMUST00000074273,ENSMUST00000107196 2 2 2 97 7 98598396 98598415 GTCTTACAGTCTCACATCTC 57 98881649 98959002 TCTGTTCCATTGACATAAGG 57 NA Mus musculus 50 Uba2 ENSMUSG00000052997 ENSMUST00000065148,ENSMUST00000102746 3 2 2 100 7 34950485 34954296 GATTGATCTGGACACTATCGA 59 34949459 34950423 CACTTTCTTTGGCAACCTG 59 NA Mus musculus 50 Brsk2 ENSMUSG00000053046 ENSMUST00000075528 1 1 4 168 7 149184442 149184463 GTCACATTCACTTTACTCTCAG 58 149186785 149187976 TCTTCTCGTCACATTTGGA 58 NA Mus musculus 50 Tanc2 ENSMUSG00000053580 ENSMUST00000100330,ENSMUST00000089485,ENSMUST00000066094 1 3 3 80 11 105761173 105763383 GTTACACTGAGATTGTCTCCT 59 105763425 105763443 AACTGTTGATTTGTGCTCG 58 NA Mus musculus 50 H2-T18 ENSMUSG00000054128 ENSMUST00000025312,ENSMUST00000102675,ENSMUST00000095300 1 3 5 124 17 36323647 36323959 AAGAACAATGGTGGAAACG 58 36323541 36323559 GGAAGATCCTTCATCCCAG 59 NA InUTR Mus musculus 50 Zfp182 ENSMUSG00000054737 ENSMUST00000115333,ENSMUST00000115334,ENSMUST00000040628 3 3 3 83 X 20613513 20613531 TCATTATCAAGCTGGAGGT 57 20608764 20613466 TAATTTGGCAGACTTCTGG 57 NA Mus musculus 50 Tcp10c ENSMUSG00000055602 ENSMUST00000116666,ENSMUST00000086787,ENSMUST00000089096 3 3 3 80 17 13262628 13263719 TGTGGGTGCAGAATATTCC 59 13263760 13263781 TCTCATCAGTCTTTGTAGTGTC 59 NA Nonspecific Mus musculus 50 Dennd1b ENSMUSG00000056268 ENSMUST00000071518 2 1 3 124 1 141022716 141030260 CTGCCTATGTTTATTGATGGTC 59 141035964 141035982 CACTGCTGATATGACCTCG 59 NA Mus musculus 50 Col25a1 ENSMUSG00000058897 ENSMUST00000106353,ENSMUST00000080335 2 2 2 134 3 129885726 129885744 CACCTTTAGAGTGCAACTG 58 130142086 130142240 CTTGTTCTCCCTTATCACCT 58 NA Mus musculus 50 Bcas3 ENSMUSG00000059439 ENSMUST00000074875 1 1 12 86 11 85615445 85638712 TCTGGAACAGAACTTCAGC 59 85638762 85638780 GAAGTTTCTTGGGATGCTG 58 NA Mus musculus 50 Suv420h2 ENSMUSG00000059851 ENSMUST00000098853,ENSMUST00000108582,ENSMUST00000076059,ENSMUST00000108583 3 4 4 90 7 4697526 4697684 CTATACCTGTGAGAGGAAAGG 59 4697735 4697754 GAGCTCATACTTGTCTAGGG 58 NA Mus musculus 50 Caln1 ENSMUSG00000060371 ENSMUST00000086029,ENSMUST00000111287,ENSMUST00000111288 1 3 3 81 5 131298832 131298852 CATTATCATCAACGAGGAGGA 59 131298895 131315166 TTTCTGCGAATGAACTCCT 59 NA Mus musculus 50 Hist4h4 ENSMUSG00000060678 ENSMUST00000102967,ENSMUST00000076545 1 2 2 65 13 23790290 23790308 GTGGTAAGGGTGGTAAAGG 59 23790243 23790261 TATCACGGAGAACCTTACG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sec22c ENSMUSG00000061536 ENSMUST00000111560,ENSMUST00000078547 1 2 2 80 9 121599526 121602039 TTCTTGAGTTTGACAGTGTC 57 121599465 121599483 CTAAGCCACTCTTCATCTG 57 NA Mus musculus 50 Akap6 ENSMUSG00000061603 ENSMUST00000110722 2 1 3 117 12 53988950 53988968 AGAATGAGAGCCATTCTGC 59 53989049 54012801 TTGTTCACAAACCCAACCT 59 NA Mus musculus 50 Med9 ENSMUSG00000061650 ENSMUST00000081980 3 1 1 236 11 59761930 59761949 GAAGGAGGAGAATTACTCCT 57 59774228 59774246 CTCTTGTACTTCTGCAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Inadl ENSMUSG00000061859 ENSMUST00000107030 1 1 10 120 4 98107782 98107800 TGAGCTGAAATCCAGATGG 59 98110492 98121062 AACCAACATCCACTTCGAG 59 NA Mus musculus 50 Ssbp3 ENSMUSG00000061887 ENSMUST00000030367 2 1 5 151 4 106682362 106699828 GGTTTCTTTCAGGGTCCTC 59 106700838 106700856 TGGTTTCCCATTCTGATCG 59 NA Mus musculus 50 Ctnna2 ENSMUSG00000063063 ENSMUST00000079296 1 1 2 98 6 76852421 76865742 CTCATTGTGTCAGGGACAG 59 76852341 76852360 GGTAGAAAGTTGACTAGCCC 59 NA Mus musculus 50 Rpl27 ENSMUSG00000063316 ENSMUST00000077856,ENSMUST00000085947,ENSMUST00000107249 1 3 3 123 11 101304983 101306551 AGGTACTCTGTGGATATCCC 59 101306637 101306763 CTGTCTTGTATCGCTCCTC 59 NA Nonspecific Mus musculus 50 Crb1 ENSMUSG00000063681 ENSMUST00000059825,ENSMUST00000027616,ENSMUST00000112009 1 3 3 60 1 141145136 141145156 GTCTATTTCTCACAACACCAG 58 141145096 141145114 TTCTGCGATTGTTACCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Crb1 ENSMUSG00000063681 ENSMUST00000027616 2 1 3 80 1 141128344 141128363 GAAGAGGACATCACGAGTG 59 141128282 141128300 TGCATAGGAACCTGTTGAC 59 NA Mus musculus 50 Lrrc51 ENSMUSG00000064307 ENSMUST00000106968,ENSMUST00000106966,ENSMUST00000078448 2 3 3 69 7 109064271 109069158 GGTCCAAGATCTGGTAACC 59 109064220 109064238 CTTTCCTGACTTTGAGTGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Col4a4 ENSMUSG00000067158 ENSMUST00000087027 3 1 2 91 1 82505821 82515513 GGATCAGATGTGATATACTGTC 57 82449485 82449504 GTTTGCTTGATCCATAGAGG 58 NA Mus musculus 50 EG331529 ENSMUSG00000067358 ENSMUST00000113172,ENSMUST00000087494 2 2 2 60 X 131975211 131975229 CTTGTCTTCATTCTGCCTC 58 131975251 131975847 ATCAGCAGATAGTACTCTCAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Tnfrsf13c ENSMUSG00000068105 ENSMUST00000089161,ENSMUST00000109534 1 2 3 60 15 82054158 82054176 CCAGACACTTCAGAAGGAG 59 82053674 82053692 CTGAGGAGGGTACAAAGAC 58 NA DesignNoJunction Mus musculus 50 Top1 ENSMUSG00000070544 ENSMUST00000109468 1 1 2 80 2 160472357 160495843 TCCGATTGAATGATTCTCAC 57 160495886 160495904 CCTTATCCTTCTTGTGCTC 57 NA Mus musculus 50 1700028K03Rik ENSMUSG00000070631 ENSMUST00000058921 1 1 3 136 5 107975290 107977145 ATAGCCAAGACTACGTCCA 59 107977243 107977263 GCACTAACTGAGTCACTACTC 59 NA Mus musculus 50 EG667719 ENSMUSG00000072479 ENSMUST00000114518,ENSMUST00000097221 1 2 2 80 X 70398481 70399534 GGATTTCAAAGGTGATGATGG 59 70399574 70399594 CTGAAAGAGGCATTTACATCC 59 NA Nonspecific Mus musculus 50 Phf20l1 ENSMUSG00000072501 ENSMUST00000048188 1 1 4 85 15 66428940 66428958 TTATGATGGCGTAATCCGT 58 66429007 66429242 TCACCTGGAACAGAAACTG 59 NA Mus musculus 50 D14Ertd449e ENSMUSG00000072676 ENSMUST00000100811,ENSMUST00000100813 1 2 2 88 14 26884812 26885046 TAAGGAATGGGTATTGGCT 57 26884128 26884146 GTCTGTGATTCCTTTACGC 58 NA Nonspecific Mus musculus 50 Mup1 ENSMUSG00000073839 ENSMUST00000107499,ENSMUST00000098052,ENSMUST00000107497,ENSMUST00000072678,ENSMUST00000098042 3 5 5 83 4 60887140 60887793 TTCTGTGACGTATGATGGA 57 60887075 60887093 TCGTTAATGAGATGAGCCA 58 NA Nonspecific Mus musculus 50 OTTMUSG00000021274 ENSMUSG00000074466 ENSMUST00000098928 3 1 1 60 3 89202046 89202064 AGTGTTGTTCTTCTGACCT 58 89202088 89202106 AACTTGAATAAACAGGCCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000015750 ENSMUSG00000074736 ENSMUST00000109935,ENSMUST00000109934,ENSMUST00000099263 3 3 4 97 2 149756771 149828923 CCCATGAGACAAACAAAGC 59 149828982 149829002 AATAGTAATGGACAGGACTGC 59 NA Mus musculus 50 Fnbp1 ENSMUSG00000075415 ENSMUST00000113564,ENSMUST00000113562,ENSMUST00000113561,ENSMUST00000073879,ENSMUST00000113560,ENSMUST00000100208,ENSMUST00000075326,ENSMUST00000100207,ENSMUST00000113555 1 9 12 80 2 30892107 30892126 CAGAGTGGACTGTATGATGG 59 30891759 30892064 GTAACTACCATCTGGGCTC 59 NA Nonspecific Mus musculus 50 2300005B03Rik ENSMUSG00000075605 ENSMUST00000057932 3 1 1 92 15 74573866 74573884 GGATTTGGAGGATGCTCTC 59 74573541 74573559 ATCTGTAAAGCTGATGGGA 57 NA DesignNoJunction Mus musculus 50 TRBV5 ENSMUSG00000076465 ENSMUST00000103266 1 1 1 60 6 41012558 41012579 GGAAGAGCAAATAAGTCTTTGG 59 41012597 41012618 ACCAGTACATAGCATTATGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV17-121 ENSMUSG00000076514 ENSMUST00000103315 3 1 1 95 6 67987077 67987095 AAAGTCACCATCAGATGCA 59 67987152 67987172 TGAAATAAGGAGCTTAGGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV9-1 ENSMUSG00000076771 ENSMUST00000103581 1 1 1 60 14 53411999 53412017 GGTTCTCATCTCGTTCCTC 59 53412166 53412184 GGAAACTGTCTGTGTTTGG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Col6a1 ENSMUSG00000078445 ENSMUST00000105412 3 1 1 60 10 76173720 76173741 CTTTCTGAAGAACATAACAGCC 59 76173095 76173113 ACAGGTATAATCCGGACAC 58 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 NP_001074754.1 ENSMUSG00000078689 ENSMUST00000107521,ENSMUST00000098041 1 2 4 164 4 59977227 60016858 GGTATCCTGTATGATTAATGGG 57 60016980 60017703 GAGCACTCTTCATCTATAACAG 58 NA Mus musculus 50 Atoh7 ENSMUSG00000036816 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Qk ENSMUSG00000044407 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Hist4h4 ENSMUSG00000067455 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-466f-3 ENSMUSG00000077981 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Tcl1b5 ENSMUSG00000000701 ENSMUST00000000717 1 1 1 105 12 106417280 106417300 AGATTACTGGATCATTCCCAG 58 106418258 106418768 CTATCAAGACCTTCCCAGC 59 NA Nonspecific, InUTR Mus musculus 50 Col1a1 ENSMUSG00000001506 ENSMUST00000001547,ENSMUST00000107754 2 2 2 82 11 94799347 94799365 ATGAAGAACTGGACTGTCC 58 94799408 94799551 GTTTGGTGATACGTATTCTTCC 59 NA Mus musculus 50 Zfp40 ENSMUSG00000002617 ENSMUST00000037057 1 1 1 117 17 23328312 23328330 ACTGTAGCAAAGGATCCAG 58 23315355 23319119 AATGTCAGTAGATCCTGGG 58 NA Mus musculus 50 Lamb1-1 ENSMUSG00000002900 ENSMUST00000002979 3 1 1 80 12 31967612 31970496 AGTGGAAGGAATGGTTCAC 59 31970540 31970558 TAGAAATCCATGCACAGCT 58 NA Mus musculus 50 Paf1 ENSMUSG00000003437 ENSMUST00000003529 2 1 1 80 7 29180706 29180799 CTCTAAGAGATCCCAGCAG 58 29180841 29180861 TATCTGTTGAACTCAGTGGAG 59 NA Mus musculus 50 Shkbp1 ENSMUSG00000003759 ENSMUST00000003857 3 1 1 89 7 28140604 28140622 TTACCTGGATCCCAGACTC 59 28140294 28140425 GGTCGATGAAGATAGCTCC 59 NA Mus musculus 50 6430517E21Rik ENSMUSG00000004031 ENSMUST00000004133 3 1 1 83 1 160196646 160196666 CCTCCTACTTCATTGACAGAG 59 160185201 160196601 TCTCTGTGACCTTTATGGC 58 NA Mus musculus 50 Etv1 ENSMUSG00000004151 ENSMUST00000095767 2 1 1 82 12 39508458 39509829 GCTCATGATTCAGAAGAACTC 58 39519758 39519776 TCATTGTCAGGTACCTGAG 58 NA Nonspecific Mus musculus 50 Ralb ENSMUSG00000004451 ENSMUST00000004565 1 1 1 92 1 121380126 121380144 TTCACAAGGTCATCATGGT 58 121374682 121380073 GCTCATAGTCTTCTACAAACTC 58 NA Mus musculus 50 Tbccd1 ENSMUSG00000004462 ENSMUST00000004576 2 1 1 81 16 22822824 22822843 CTAGTAGGAGCACATGTCAG 59 22822639 22822782 CAATTGTCATGGATCGTAAGG 59 NA Mus musculus 50 Crabp2 ENSMUSG00000004885 ENSMUST00000005019 1 1 1 111 3 87756206 87756408 ACCCTGTAAGAGTTTGGTG 59 87756483 87756501 ATCATTGGTCAGTTCTCGG 59 NA Mus musculus 50 Snai3 ENSMUSG00000006587 ENSMUST00000006762 1 1 1 153 8 124980142 124980160 ACTGTGACAAGGAGTATGC 59 124978919 124980025 GTATAGGGCTTCTCACCTG 58 NA Mus musculus 50 Bat5 ENSMUSG00000007036 ENSMUST00000007251 3 1 1 130 17 35235890 35235908 TAGACACCATGTTTGTGGA 58 35237336 35237594 AGAATAGCCAGCTTCTAGG 58 NA Mus musculus 50 Clec3a ENSMUSG00000008874 ENSMUST00000009018 3 1 1 116 8 116942095 116946832 TGAAAGCAAAGGATGACGA 59 116949363 116949381 TATGAACTTTGGTGCCTCG 59 NA DesignNoJunction Mus musculus 50 Tmem87b ENSMUSG00000014353 ENSMUST00000110325 1 1 1 80 2 128668420 128671202 CAGCAAATAATCAGAGGTATGC 59 128671240 128671261 CAGATGTTACCATGAATTCCTC 58 NA Nonspecific Mus musculus 50 Entpd2 ENSMUSG00000015085 ENSMUST00000114287 3 1 2 104 2 25253576 25253594 TGAATGTCTTGAACAGGCA 59 25253662 25254060 CCAGCCATATTGAGTAGGC 59 NA Mus musculus 50 Chd3 ENSMUSG00000018474 ENSMUST00000053025,ENSMUST00000092971,ENSMUST00000108661,ENSMUST00000006726 3 4 4 80 11 69173725 69173743 AGAGCGAGAGTTCTTTGTC 59 69173530 69173681 AAGATTTCCAGCTGAAGCT 59 NA Mus musculus 50 Tada2l ENSMUSG00000018651 ENSMUST00000108100,ENSMUST00000018795 1 2 2 80 11 83899194 83899212 GCTCTCAGAAGTTCTCCAG 59 83898251 83899150 CCAGAATCAATGTCAGCCT 59 NA Mus musculus 50 Fndc8 ENSMUSG00000018844 ENSMUST00000018988 1 1 1 84 11 82712257 82712275 GTCAAACACGAGTTACTGC 59 82712323 82713030 GGTTGCAAACTTATAGGGC 58 NA Mus musculus 50 Mfsd3 ENSMUSG00000019080 ENSMUST00000019224 3 1 1 62 15 76533567 76533585 TCACTGTGATGATGCACTG 59 76533611 76533708 AGCTGTAATGTGTAGCCTG 59 NA DesignRelaxed Mus musculus 50 Gyg ENSMUSG00000019528 ENSMUST00000019672 3 1 1 81 3 20022737 20025151 TAATGATGGAACATGTCTCAGG 59 20022677 20022696 GAGGACATAGAAGGTTGTGG 59 NA Mus musculus 50 Rcn3 ENSMUSG00000019539 ENSMUST00000019683 2 1 1 140 7 52339130 52340286 GAAGAGTATATCGCGGACC 59 52339008 52339026 CCAGTAACCGACTTCACTG 59 NA Mus musculus 50 Serinc1 ENSMUSG00000019877 ENSMUST00000020027 3 1 1 82 10 57245291 57247480 ACTGAATAAGATTCCTGGGT 58 57245228 57245246 GATACACAGCTTTGTAGCC 58 NA Mus musculus 50 Lin7a ENSMUSG00000019906 ENSMUST00000105280 3 1 2 80 10 106817199 106817292 ACAGCAAAGGTATTCTCGT 58 106817333 106817354 GAGTAGTACTGGTTCTAGACTC 58 NA InUTR Mus musculus 50 Sar1a ENSMUSG00000020088 ENSMUST00000020285 3 1 1 102 10 61147845 61147863 CTTAGGATTGGACAATGCG 58 61147929 61148315 CAGTTCTTCTGAAGTGGGA 58 NA Mus musculus 50 D10Ertd641e ENSMUSG00000020107 ENSMUST00000020307 3 1 1 82 10 59453645 59459203 GTTAGAAGATGGCTCCGAG 59 59453581 59453600 CATGCTTCACCTGTTTAAGC 59 NA Mus musculus 50 Ccl11 ENSMUSG00000020676 ENSMUST00000000342 1 1 1 91 11 81875211 81875229 TGACCAGTAAGAAGATCCC 57 81875284 81875717 GGTCTTGAAGACTATGGCT 58 NA Mus musculus 50 Acox1 ENSMUSG00000020777 ENSMUST00000072948,ENSMUST00000066587,ENSMUST00000021129 3 3 3 110 11 116040154 116040935 GAAATCAAGAGAAGCGAGC 58 116040062 116040081 GTATCTTCCGAGAAAGTGGA 58 NA Mus musculus 50 1810032O08Rik ENSMUSG00000020812 ENSMUST00000106378,ENSMUST00000021167 3 2 2 87 11 116533616 116533634 AGTTCTCAAGTTCAGCCAG 59 116533993 116534011 TTTCCATGATGCTTCCTGG 59 NA DesignNoJunction Mus musculus 50 Eftud2 ENSMUSG00000020929 ENSMUST00000107060,ENSMUST00000021306 3 2 2 84 11 102709322 102709340 CTACACCTTGGAAGACGAG 59 102707995 102709274 CACCTCAATGTGGTACCTG 59 NA Mus musculus 50 Plcd3 ENSMUSG00000020937 ENSMUST00000103077,ENSMUST00000021320 2 2 2 83 11 102938930 102939082 TATATTAGGGCCTTTGCCC 58 102938865 102938883 ATGGTAGATGACAGGTTCC 58 NA Mus musculus 50 Ndufs6 ENSMUSG00000021606 ENSMUST00000022097 2 1 1 132 13 73457856 73464874 GTCAGAAAGAGGTGAATGAG 57 73457743 73457762 AAGTTTATGTACACCTTGGG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Vcan ENSMUSG00000021614 ENSMUST00000109546,ENSMUST00000022114,ENSMUST00000109545,ENSMUST00000109544,ENSMUST00000109543 3 5 6 89 13 89861292 89861390 GATCAAACTGTCAGATATCCCA 59 89861224 89861242 GAATCCATAGGTCCGAACC 59 NA Mus musculus 50 Srl ENSMUSG00000022519 ENSMUST00000023161,ENSMUST00000090500 1 2 2 80 16 4483279 4486290 GCAACAAGAAAGAGGTTACC 59 4483218 4483237 TCGAAGACAACGAAGATGAG 59 NA Mus musculus 50 Alcam ENSMUSG00000022636 ENSMUST00000023312 1 1 1 80 16 52270805 52270823 ACATTAACTTGCACAGCAG 58 52268925 52270762 GTGCTCTGGAATACTTATCG 57 NA Mus musculus 50 Zfp641 ENSMUSG00000022987 ENSMUST00000023722 3 1 1 80 15 98119643 98120919 CACATATACAGGAGACGGAG 59 98119582 98119601 ACACTGGATAATGTTCTGGG 59 NA Mus musculus 50 6330407G11Rik ENSMUSG00000023075 ENSMUST00000102636 3 1 1 239 4 123420679 123420697 CTTACTGCACCAGGTTCTC 59 123414097 123415261 TCAGGATACATAGCTTGTTGG 59 NA DesignRelaxed Mus musculus 50 Msrb2 ENSMUSG00000023094 ENSMUST00000023856 1 1 1 93 2 19304933 19314841 CCCACTCTTCAGTTCTGAG 59 19314898 19314916 GTGACTTTCATCTGAGCCT 59 NA Mus musculus 50 Brp44l ENSMUSG00000023861 ENSMUST00000024637 2 1 2 95 17 8481597 8489407 ATTCCAGCACTCACTTCTG 59 8489466 8489484 GCCCACTGATAATCTCTGG 59 NA Mus musculus 50 1500032D16Rik ENSMUSG00000024038 ENSMUST00000046288 3 1 3 107 17 31658624 31664259 AAGTGTGCTCAAAGATGTG 58 31664330 31664348 ACTGATGGGTAAGAACTGG 58 NA Mus musculus 50 Epb4.1l3 ENSMUSG00000024044 ENSMUST00000024843,ENSMUST00000112680,ENSMUST00000080208,ENSMUST00000112679,ENSMUST00000112678 3 5 6 81 17 69592992 69596884 AGATATCACCAGGTACTACCT 58 69596927 69596945 AAGAGTCACGAAGGAACAG 59 NA Mus musculus 50 Sos1 ENSMUSG00000024241 ENSMUST00000068714 2 1 1 80 17 80848643 80848663 GTAGAAATGACAGATGAAGGC 58 80845038 80848602 GTCAAATGCCAGTTCTTCTG 59 NA Mus musculus 50 Cpt1a ENSMUSG00000024900 ENSMUST00000025835 1 1 1 80 19 3380161 3381619 CTGAAGGAGGTACTGTCTG 58 3381662 3381681 CTCAAAGTCAAACAGTTCCA 58 NA Mus musculus 50 Hells ENSMUSG00000025001 ENSMUST00000025965 1 1 1 80 19 39033637 39034164 ATGACAGTGATTGGAATCCT 58 39034207 39034225 CAACAACTGGCTTTGTCTG 59 NA Mus musculus 50 3110040N11Rik ENSMUSG00000025102 ENSMUST00000026092 1 1 1 82 7 88928012 88930970 TGGATAAGGGTGGTAAATCTC 58 88927950 88927968 TTTCAGCTTCTCCAAGACC 59 NA Mus musculus 50 Msx3 ENSMUSG00000025469 ENSMUST00000055353,ENSMUST00000106084 1 2 2 65 7 147233905 147233923 TACTTATCCATTGCGGAGC 59 147233858 147233876 CTTGACCTGAGTCTCAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 F430201B04Rik ENSMUSG00000025727 ENSMUST00000088234 3 1 2 130 17 26083641 26083659 CTGTCATTCCTGGTAGTGG 59 26083526 26083547 AGAGGAACCCATACTTGGT 59 NA Mus musculus 50 Fbxl16 ENSMUSG00000025738 ENSMUST00000045692 1 1 1 84 17 25955474 25955492 TATTTGTCCACCATGTCGT 58 25955853 25955871 CTAAGAGGTGCTTCAACCC 59 NA DesignNoJunction Mus musculus 50 Gdap1 ENSMUSG00000025777 ENSMUST00000026879 3 1 1 82 1 17148572 17150011 GAAGCGACTTAAGTCAAAGC 59 17150056 17150074 CCAAGACCTTCTCCAACTC 59 NA Mus musculus 50 Als2cr2 ENSMUSG00000026027 ENSMUST00000114296,ENSMUST00000027185 3 2 2 80 1 59042219 59045355 GCAAGTGGAGATAGGAAGAG 59 59045397 59045416 GTTACCAGTGTTCCTGTAGG 59 NA Mus musculus 50 Obfc2a ENSMUSG00000026107 ENSMUST00000027279 1 1 1 84 1 51529851 51529869 GAGGACAGCAGAATAGAGG 58 51528243 51529178 TGATCACCATTTCCCACTG 59 NA Mus musculus 50 Ndufa10 ENSMUSG00000026260 ENSMUST00000027478 3 1 1 81 1 94360984 94361003 CACGCAGTCATCTATATCGA 59 94359719 94360942 CCTTCATTTCATGTGGATCTC 58 NA Mus musculus 50 Rgs1 ENSMUSG00000026358 ENSMUST00000027604 3 1 1 138 1 146096061 146096079 GCCATTCTCTTCTAGACGA 58 146095089 146095620 GCAGAAAGTATGTCTTTGGAC 59 NA Mus musculus 50 Atp2b4 ENSMUSG00000026463 ENSMUST00000112267,ENSMUST00000086485 3 2 5 144 1 135608329 135608347 AGAACATGACTCAACACCT 58 135603558 135608221 GTTTGACGACTCTGATTGC 59 NA Mus musculus 50 Slc4a10 ENSMUSG00000026904 ENSMUST00000054484,ENSMUST00000112480,ENSMUST00000102735 1 3 3 80 2 62088581 62091374 CAATCCCAAGCAGATTTCTG 59 62091417 62091435 CAATCGATCTGCCAATCTC 58 NA Mus musculus 50 Card9 ENSMUSG00000026928 ENSMUST00000028294,ENSMUST00000100303 1 2 2 80 2 26208526 26209887 CTCAGACAAAGGTGTACTGG 59 26208465 26208483 GTCAGTGAAAGATGCTCCT 59 NA Mus musculus 50 Ssrp1 ENSMUSG00000027067 ENSMUST00000028463,ENSMUST00000077798 1 2 2 80 2 84880939 84881086 TCTTTGTGATCAGCTTGGA 58 84881130 84881148 CATCCTTGGAGAAGAGGAG 58 NA Mus musculus 50 Atf2 ENSMUSG00000027104 ENSMUST00000112007,ENSMUST00000055833,ENSMUST00000090802,ENSMUST00000112017,ENSMUST00000112016,ENSMUST00000100009,ENSMUST00000112010,ENSMUST00000112002 2 8 10 80 2 73657200 73661271 GTCTGGCTATCATACTGCTG 59 73657139 73657157 TGGATCGCTTCTGTATGTG 59 NA Mus musculus 50 Chst1 ENSMUSG00000027221 ENSMUST00000065797,ENSMUST00000028649 1 2 2 60 2 92453450 92453468 CTGACAGATACTGGCTTGG 59 92453492 92453510 GGTTGTAGGAGAAGGTAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Jag1 ENSMUSG00000027276 ENSMUST00000028735 2 1 1 80 2 136919046 136920196 TTCCACAAACATCGATGAC 58 136918984 136919003 CACTTGAATCCATTCACCAG 58 NA Mus musculus 50 Gnas ENSMUSG00000027523 ENSMUST00000076093 1 1 14 155 2 174110971 174159723 GGATAAAGGTGCTGGAGAG 59 174163133 174163151 GTAGCCATCATCTAGTGGG 58 NA InUTR Mus musculus 50 Shox2 ENSMUSG00000027833 ENSMUST00000029422 1 1 1 80 3 66779413 66779432 CCAGTTTGAAGCTTGTAGAG 58 66777852 66779370 TTGCAATGACTATCCTGCT 58 NA Mus musculus 50 4930443G12Rik ENSMUSG00000027880 ENSMUST00000029478 2 1 1 80 3 108915034 108915052 AGGTTATGTTCCCAACCTG 59 108915095 108915704 CAGTGATTCTTCAGAAGCTC 58 NA Mus musculus 50 Lelp1 ENSMUSG00000027927 ENSMUST00000029535 1 1 1 60 3 91939637 91939658 CAAGTGATAAGTCTAGTGACTC 57 91939598 91939616 TGTTCACATCTGGGATCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pmvk ENSMUSG00000027952 ENSMUST00000029564,ENSMUST00000107408 3 2 2 117 3 89271529 89271547 GTGATACAGACAGTCCGAG 59 89272465 89272483 AGTTCCCAAAGTTGTCCAG 59 NA DesignNoJunction Mus musculus 50 Slc35a3 ENSMUSG00000027957 ENSMUST00000029569 3 1 1 90 3 116397405 116397423 CTGTCTTCTACAGCAGTGG 59 116390329 116397354 CTCTCACACTACACTTACTGTC 59 NA Mus musculus 50 Dclk2 ENSMUSG00000028078 ENSMUST00000029719,ENSMUST00000098983,ENSMUST00000094144 2 3 3 82 3 86709861 86709880 TAACAGATATCACCGAAGCC 59 86640321 86709816 ACAAGTAACCTGCTTTCCA 59 NA Mus musculus 50 Lhx8 ENSMUSG00000028201 ENSMUST00000029852 1 1 1 80 3 153985251 153985269 GAAGGTCCTCTGTAGAGTG 58 153984679 153985207 ACACTAATCCCATTACCGT 57 NA Mus musculus 50 Ccnc ENSMUSG00000028252 ENSMUST00000065928,ENSMUST00000051664,ENSMUST00000102997,ENSMUST00000108240,ENSMUST00000029916 3 5 5 81 4 21670448 21673501 CATGATCGCTTTAGCTTGC 59 21673545 21673564 CACAGAAAGTTCTGCAAACC 59 NA Mus musculus 50 Cachd1 ENSMUSG00000028532 ENSMUST00000030257 2 1 1 105 4 100667431 100675474 AAGTGATCATGGGTACAGC 59 100675543 100675561 GTCATCATGGTTCCCTACG 59 NA Mus musculus 50 Eif2b3 ENSMUSG00000028683 ENSMUST00000106448,ENSMUST00000106447,ENSMUST00000094862,ENSMUST00000070610 1 4 4 87 4 116701152 116717049 AAAGCTTAAGACCGATGTG 57 116717100 116717118 ATAAGCTCTGAACAGGTCC 58 NA Mus musculus 50 Csmd2 ENSMUSG00000028804 ENSMUST00000074081 1 1 2 81 4 128207923 128207941 CATCAACTGTACGGATCCC 59 128207986 128244493 TGAAGGGCTTAATCTGTGG 59 NA Mus musculus 50 Mtf1 ENSMUSG00000028890 ENSMUST00000106193,ENSMUST00000106191,ENSMUST00000030723 2 3 3 80 4 124498532 124498551 CAGCAAATACTTCACCACAC 59 124498594 124501539 TGATCACATCGAAATGGCT 59 NA Mus musculus 50 Slc25a33 ENSMUSG00000028982 ENSMUST00000105686 3 1 1 80 4 149130254 149136489 CTACAGGTTCTGAAATCAATCC 58 149130195 149130214 AACTCCAACCAAATTTGGAC 58 NA Nonspecific Mus musculus 50 Nmnat1 ENSMUSG00000028992 ENSMUST00000030845,ENSMUST00000105693 1 2 2 142 4 148847509 148847527 AAGAAGAAAGGGCTCATCC 59 148843883 148847403 TGATGGTATCTGAGCACCT 59 NA Mus musculus 50 Sparcl1 ENSMUSG00000029309 ENSMUST00000031249 3 1 1 98 5 104516169 104517426 AGCTTGCAAATCTATTCCTG 58 104516090 104516108 TCATAAAGCTGCATGAGGA 58 NA Mus musculus 50 Nudt9 ENSMUSG00000029310 ENSMUST00000031250 3 1 1 84 5 104484577 104487129 CAGATCCTATTATAACCAGGTGG 59 104487173 104487191 AACTGCAAGATGCATTTCC 59 NA Mus musculus 50 P2rx7 ENSMUSG00000029468 ENSMUST00000086247 3 1 3 84 5 123104229 123104996 GTGTCCTGAGGATCTTTCC 59 123105044 123105062 TTCTTCCTTCTTGGCTCTG 59 NA Mus musculus 50 4921520G13Rik ENSMUSG00000029607 ENSMUST00000110717 2 1 2 151 5 144655642 144655660 GTTACAGACTACTGAGCCA 58 144652680 144652698 CATCAGGTGAAGGGTAGTG 59 NA DesignNoJunction Mus musculus 50 Cdk8 ENSMUSG00000029635 ENSMUST00000110605,ENSMUST00000031640 1 2 3 101 5 147104253 147104271 TTTCACTGTCGACAAGAGG 59 147104335 147106749 CCAATCTTTATCTGCAGGGA 59 NA Mus musculus 50 Nup210 ENSMUSG00000030091 ENSMUST00000113509,ENSMUST00000032179,ENSMUST00000068922 2 3 3 80 6 91035974 91037834 TCTATAAGAATGTTCGCCCT 58 91035913 91035931 GGTAGACATCATAGGCTGG 58 NA Mus musculus 50 Itpr1 ENSMUSG00000030102 ENSMUST00000032192,ENSMUST00000113208,ENSMUST00000113207,ENSMUST00000113204 1 4 4 80 6 108492045 108499753 AACTAAAGGACCAGATGACAG 59 108499795 108499813 TGACATTCATGTGAGGAGG 58 NA Mus musculus 50 Mlf2 ENSMUSG00000030120 ENSMUST00000032214 3 1 1 202 6 124884750 124885255 CAACCTGGATGAAAGTGAG 58 124885421 124885439 TTCACCAGTCATAACGACG 59 NA DesignRelaxed Mus musculus 50 Tmcc1 ENSMUSG00000030126 ENSMUST00000088896,ENSMUST00000101033 1 2 3 169 6 116084471 116088226 GGAGAGCAATGAAGGTAGG 59 116084320 116084338 TATAACTGTTCACTGCCGG 59 NA InUTR Mus musculus 50 C530028O21Rik ENSMUSG00000030329 ENSMUST00000032479 2 1 1 242 6 124949599 124949617 AATCCTGGATTTCTGCCTC 59 124950735 124951445 GCAGAACTTGAAGATGATGC 59 NA DesignNoJunction Mus musculus 50 Fbxo17 ENSMUSG00000030598 ENSMUST00000108278 2 1 3 120 7 29522458 29522477 TTGTAACTCACTCCAGTGTG 59 29522560 29522696 ATCATGGTAGTCCCTTTGG 58 NA InUTR Mus musculus 50 Mrpl46 ENSMUSG00000030612 ENSMUST00000032841 2 1 1 110 7 85926366 85926385 TATGATGAGGAACAAGAGCA 58 85925487 85926293 TTTGTCAGCTTCTGTTTCC 58 NA Mus musculus 50 Art2b ENSMUSG00000030651 ENSMUST00000063920 1 1 1 200 7 108728590 108728608 AGAATTCTCCTCATTCCCT 57 108727447 108728428 TCTCTGGATCCTGATATACTG 57 NA Mus musculus 50 Ccdc95 ENSMUSG00000030689 ENSMUST00000032928 2 1 2 60 7 134004784 134004803 CCTTCTAGATCGACTTCTGC 59 134001456 134004761 GGCATCTGAATCAGAGGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Coro1a ENSMUSG00000030707 ENSMUST00000032949,ENSMUST00000106364 3 2 2 102 7 133844324 133844342 CTTTCCATGTTCAGTTCCA 57 133844142 133844259 GAAGCTTATAGAATCTGGCA 57 NA Mus musculus 50 Ppme1 ENSMUSG00000030718 ENSMUST00000032963 3 1 1 90 7 107486941 107486960 GAAGGAATCATAGAGGAGGA 57 107483678 107486888 CCTTCTTGGTTTCCATGTC 58 NA Mus musculus 50 Tead2 ENSMUSG00000030796 ENSMUST00000033060,ENSMUST00000107801,ENSMUST00000097216 2 3 3 112 7 52481155 52484016 CAGTTGACTCGTTCCAGAG 59 52484090 52484110 AGGGAATTTGTCGTAGATCTG 59 NA Mus musculus 50 Fgfr2 ENSMUSG00000030849 ENSMUST00000033138,ENSMUST00000106209,ENSMUST00000068807,ENSMUST00000106208 3 4 4 82 7 137307628 137311227 CAACCAATGAGGAATACTTGG 58 137307566 137307584 AGAACAAGAGCTCCTTGTG 59 NA Mus musculus 50 Gla ENSMUSG00000031266 ENSMUST00000033621 1 1 1 80 X 131126657 131126675 TCTTGGACAGTGGTTTACC 59 131125674 131126614 GATCACTAACATGTCTGGGT 59 NA Mus musculus 50 Chrnb3 ENSMUSG00000031492 ENSMUST00000060943,ENSMUST00000079463 1 2 2 129 8 28504851 28504869 AAAGAAGCAGACTCCTACC 58 28504962 28507143 GTCTTGAACAACCTGACTG 58 NA Mus musculus 50 Slc27a1 ENSMUSG00000031808 ENSMUST00000034267 2 1 1 76 8 74104714 74104732 TACTGCGCAAGAAGTTCTC 59 74104772 74108031 TATGTACTGCACTACCGTG 58 NA DesignRelaxed Mus musculus 50 Nfatc3 ENSMUSG00000031902 ENSMUST00000109308,ENSMUST00000034376,ENSMUST00000093190 1 3 3 80 8 108616061 108616081 CAAGAGATAATAATCGCCAGC 58 108616123 108620073 ACAGTCAATACTCGCTGAC 59 NA Mus musculus 50 2200002K05Rik ENSMUSG00000031937 ENSMUST00000034413 2 1 1 80 9 15061934 15061952 TACATCGTCACTGTCACAG 59 15061996 15062108 TTCATAGCGGATCTCAGAC 58 NA Mus musculus 50 Barx2 ENSMUSG00000032033 ENSMUST00000051296,ENSMUST00000116615 2 2 2 98 9 31654629 31661705 AGAAGATGGTCCTTAAAGGT 57 31654550 31654568 CTTCAGCTTCAATCTCCTC 57 NA Mus musculus 50 Stt3a ENSMUSG00000032116 ENSMUST00000086102 3 1 1 80 9 36566835 36566854 CATAACTGGTTTGATGACCG 58 36566439 36566793 AGTGATCATTAAACCTGGGT 58 NA Mus musculus 50 Ulk3 ENSMUSG00000032308 ENSMUST00000053230 3 1 1 81 9 57438207 57438226 TGACTGAGATTGAGATCCTC 58 57438269 57438484 ATATTGTCATTGTCCCACTG 57 NA Mus musculus 50 Rasa2 ENSMUSG00000032413 ENSMUST00000034984 1 1 1 81 9 96503185 96503204 AGACTTGTGCAGTCATAGTG 59 96492437 96503142 AACCTTTCCCTGAACTTCTG 59 NA Mus musculus 50 Rbp2 ENSMUSG00000032454 ENSMUST00000035029 2 1 1 262 9 98399240 98399258 ACTACGACCTGGATTTCAC 58 98410014 98410032 AGAACTCTGCACATGTTCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Slc10a3 ENSMUSG00000032806 ENSMUST00000073067,ENSMUST00000114146,ENSMUST00000114147,ENSMUST00000037967 1 4 4 60 X 71615347 71615367 CCATGACTTTCATCTCAACAG 58 71615307 71615325 TAGATGGCTGATGAGAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 5730522E02Rik ENSMUSG00000032985 ENSMUST00000109511 3 1 1 95 11 25669048 25669067 TGGAACCAAATTTCACATCC 58 25552059 25668990 CTAACGGAGCCTCTTACTG 59 NA Mus musculus 50 Eif3eip ENSMUSG00000033047 ENSMUST00000040518 1 1 1 80 15 78912347 78914549 TCATCTACCAGTTCCAGTC 57 78914593 78914611 ACCTAAGGAAGTCCATCTC 57 NA Mus musculus 50 Cdc14b ENSMUSG00000033102 ENSMUST00000039318,ENSMUST00000109770,ENSMUST00000109769 2 3 3 80 13 64317566 64317584 CTGGATAATACCAGAGCGA 58 64317023 64317522 GAATGTTGGTGGTAACCAC 58 NA Mus musculus 50 Fndc3a ENSMUSG00000033487 ENSMUST00000089017 3 1 1 80 14 72940278 72952287 TTCAAGCAGATTTACAAGGG 58 72940217 72940236 CACTCGAAATCGATACTCAC 58 NA Mus musculus 50 Pols ENSMUSG00000034575 ENSMUST00000044081 1 1 1 80 13 69643537 69643555 CTACGCTTACATTGTGCTC 58 69642605 69643496 CCTAAAGTACTTTCAGAATCCC 58 NA Mus musculus 50 Nxnl1 ENSMUSG00000034829 ENSMUST00000048243 3 1 1 95 8 74086221 74086239 TTTCTTTCCCAGATCTCCT 57 74085700 74086163 CGGTAGTGCATGATTAAGAC 58 NA InUTR Mus musculus 50 D230004J03Rik ENSMUSG00000034832 ENSMUST00000089622,ENSMUST00000051321 3 2 2 129 6 83323321 83323790 CCTATCAGAACCAGGTGAC 59 83323210 83323228 TTATGTTGGTCCTTGTGGG 59 NA Mus musculus 50 5031414D18Rik ENSMUSG00000034959 ENSMUST00000036072 3 1 1 88 14 75438726 75440614 AACTCTTCAAAGAGTGCGA 59 75440666 75440684 CAGCACTTACAGAACCCTC 59 NA Mus musculus 50 Nfkbiz ENSMUSG00000035356 ENSMUST00000114457,ENSMUST00000114458,ENSMUST00000036273 2 3 4 80 16 55815802 55815820 TAAGGAATAAGAGCCTGGT 57 55814452 55815758 CACTCTTACGATCCTTTGC 58 NA Mus musculus 50 Lmo1 ENSMUSG00000036111 ENSMUST00000036992 3 1 1 67 7 116284118 116284136 TATCACCTTGACTGCTTCG 59 116282464 116282482 AGGAAGAATTTGTCTCCCA 58 NA DesignNoJunction Mus musculus 50 Fgf1 ENSMUSG00000036585 ENSMUST00000040647,ENSMUST00000115582 3 2 3 83 18 39006746 39006764 TATAAAGGGTACGGAGACC 57 39001756 39001775 CATTCCTCATTTGGTGTCTG 58 NA DesignNoJunction Mus musculus 50 Topors ENSMUSG00000036822 ENSMUST00000042575 1 1 1 262 4 40216737 40216755 TACCAGGGAGTAAGTCCAG 59 40210099 40215339 CAGCTGAGGCCATTATCTC 59 NA DesignRelaxed, InUTR Mus musculus 50 C1ql2 ENSMUSG00000036907 ENSMUST00000037286 3 1 1 60 1 122239058 122239076 TGAAGTCTACGTGAAGCTG 59 122239099 122239118 GCTGTACTTGTTATTGTTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Aifm1 ENSMUSG00000036932 ENSMUST00000037349,ENSMUST00000114945 2 2 2 82 X 45835982 45836344 AAAGTCAAACGAGAGGGAG 59 45835918 45835937 TTAATGAGTAACCTGCCACC 59 NA Mus musculus 50 Elac1 ENSMUSG00000036941 ENSMUST00000041138 3 1 1 133 18 73902445 73906830 CTTAAAGCAGGGAGAATTACC 58 73902332 73902350 TAGATCTCAATAGGCTGCC 58 NA Mus musculus 50 Ndufc1 ENSMUSG00000037152 ENSMUST00000038108 3 1 1 188 3 51212143 51212161 GGTCGAAGTTCTATGTCCG 59 51209525 51211259 CATCACATGAAGCTGACTG 58 NA DesignNoJunction, InUTR Mus musculus 50 1110003E01Rik ENSMUSG00000037822 ENSMUST00000040532 3 1 1 129 5 65859645 65859663 ACGAACATGCTATGAGGAG 59 65844519 65844537 ATCAGGATCACAGTGATGC 59 NA DesignNoJunction Mus musculus 50 Ccdc55 ENSMUSG00000037958 ENSMUST00000102494 2 1 1 80 11 76864138 76864157 AGCGTTTATGATGAGATGCA 59 76862974 76864095 ATATTTGGGCTTCCGATCC 59 NA Mus musculus 50 Asah3l ENSMUSG00000038007 ENSMUST00000045224 1 1 2 158 4 86546518 86557532 GAAGAGGTGTGACAATGTG 58 86557653 86563312 CAGATGAGAATATGCCACAC 58 NA Mus musculus 50 Cdc2l6 ENSMUSG00000038481 ENSMUST00000044672,ENSMUST00000095743 1 2 2 80 10 40195989 40196008 AACCAAGAGAATCACCTCAG 59 40196050 40196703 GCGAACACATCTAATGTTGG 59 NA Mus musculus 50 Sv2a ENSMUSG00000038486 ENSMUST00000035371 2 1 1 81 3 95994360 95994558 TTCAATGACAAGTTCATCGG 58 95994599 95994620 CATCTTCAAAGTAACACTCCTC 58 NA Mus musculus 50 Gdf15 ENSMUSG00000038508 ENSMUST00000110103,ENSMUST00000003808 3 2 2 242 8 73155455 73155473 CTCTCAACTGAGGTTCCTG 59 73154073 73155249 ACCTCTGGACTGAGTATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Six3 ENSMUSG00000038805 ENSMUST00000043819 1 1 1 289 17 86021335 86021353 CAACTGGTTTAAGAACCGG 58 86027040 86027058 TTCAGCATAGCTCCTTCTC 58 NA DesignNoJunction Mus musculus 50 Ctnnal1 ENSMUSG00000038816 ENSMUST00000045142,ENSMUST00000107612 2 2 2 84 4 56854545 56857329 CGAGAAACAAGATTCTCGC 58 56854479 56854498 CCAAACTGGCTGAATATCTG 58 NA Mus musculus 50 1110039B18Rik ENSMUSG00000038828 ENSMUST00000046349 2 1 2 132 5 31174188 31174206 CTGTCTATTCACCATGCTG 57 31174518 31174882 CTCTAGGAACTTGTCCAGG 58 NA Mus musculus 50 Timm8b ENSMUSG00000039016 ENSMUST00000044051 2 1 1 143 9 50413052 50413072 GGAACTATGTTGGGATAAGTG 58 50413177 50413195 CCTTTCTGTACGATCTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Echdc3 ENSMUSG00000039063 ENSMUST00000042658,ENSMUST00000114941 3 2 2 91 2 6127551 6129524 TATAATTTCAGCCGAGGGC 59 6127478 6127498 ATACCTCAGCGTGATAATCAC 59 NA Mus musculus 50 Runx2 ENSMUSG00000039153 ENSMUST00000113576,ENSMUST00000113572,ENSMUST00000113571,ENSMUST00000077846,ENSMUST00000113568 3 5 5 120 17 44861778 44861798 GGAATGATGAGAACTACTCCG 59 44854230 44861696 AAGGTGAAACTCTTGCCTC 59 NA Mus musculus 50 Abhd2 ENSMUSG00000039202 ENSMUST00000037315 3 1 1 80 7 86442024 86442042 CTGACCTCTACTTCCAGGA 59 86442083 86468365 GTGGAATGTATTCTTTGGTCAG 59 NA Mus musculus 50 Ttc18 ENSMUSG00000039543 ENSMUST00000022349 3 1 1 80 14 21262898 21263096 TCCTTTACTAGAAGGAGAGGA 58 21262838 21262856 AAAGGAGTTTCCAAGGGTG 59 NA Nonspecific Mus musculus 50 Ldb2 ENSMUSG00000039706 ENSMUST00000070748,ENSMUST00000114010 3 2 2 82 5 44932975 44932995 CTCATCCATCACAGTAGACTG 59 44926387 44932931 CTTCTGTGCATACCTTGGT 59 NA Mus musculus 50 MGI:1917752 ENSMUSG00000039835 ENSMUST00000100054 2 1 2 84 10 18235954 18243602 CAGAAGGAGCTAGCATCAG 59 18243648 18243668 CTAACGTAGAGTAGTGGTCTG 59 NA Mus musculus 50 2900083I11Rik ENSMUSG00000039860 ENSMUST00000111157 2 1 2 89 5 136316266 136316284 CAGATGCTGATGGAGAAGG 59 136316337 136316355 CTCCCTTACTGTCACTCAG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Dtx4 ENSMUSG00000039982 ENSMUST00000045521 1 1 1 127 19 12556707 12557544 CCAGAAGAGGATTGTACCA 58 12556598 12556616 TAGATGTGGTAGATGTGGC 58 NA Mus musculus 50 Ctsg ENSMUSG00000040314 ENSMUST00000015583 1 1 1 101 14 56720508 56720526 TCTTCTGATCCAGAGTCCA 59 56719938 56720443 TTTATGGAGCTTCCCAAGC 59 NA Mus musculus 50 Timd2 ENSMUSG00000040413 ENSMUST00000109225,ENSMUST00000055102 1 2 2 80 11 46489841 46490718 GGTTATCACCAGGTACGTG 59 46484488 46484508 GCTCCAATCTTAGAGATAGGG 59 NA Mus musculus 50 1700054O13Rik ENSMUSG00000040456 ENSMUST00000044987 2 1 1 60 X 9424267 9424285 GCAGGAGGAGCAATATACC 59 9424308 9424327 CATGGCAAGAAGGAAATCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bace2 ENSMUSG00000040605 ENSMUST00000047275 1 1 1 80 16 97636774 97643462 CACGAACATCTCTGATTCCA 59 97643505 97643523 GCGTTTCAGAATTTGTCCA 58 NA Mus musculus 50 4930579G18Rik ENSMUSG00000040840 ENSMUST00000038631 2 1 1 151 14 55272289 55272684 TGGTTACAGCAGCTAAGAG 58 55273005 55273023 CTCTCCCAGACTTATCCAC 58 NA DesignNoJunction Mus musculus 50 Txndc3 ENSMUSG00000041138 ENSMUST00000039340 3 1 2 184 13 19749920 19750643 TCCACAGAGTTTATGTGTACAG 59 19737088 19737107 ATTACCTCCTTGAGCTTCTG 59 NA Mus musculus 50 Zfp281 ENSMUSG00000041483 ENSMUST00000112046,ENSMUST00000047734 2 2 2 60 1 138524390 138524408 TGCCAATGACCTTTATCAC 57 138524430 138524450 ACTGAAGTCCTTACTCTATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 L3mbtl4 ENSMUSG00000041565 ENSMUST00000047556 2 1 1 88 17 68708871 68708889 TGAATCAGGACAGATGCAC 59 68742272 68775007 AGTCACAGAAGATTCTCGC 59 NA Mus musculus 50 Sestd1 ENSMUSG00000042272 ENSMUST00000102660,ENSMUST00000044107,ENSMUST00000102659 1 3 3 80 2 77030628 77034889 GGAAACAAAGATGTGAGGAC 58 77030567 77030588 CCTCTTCACACTTAAACAACTG 59 NA Mus musculus 50 D0H4S114 ENSMUSG00000042834 ENSMUST00000051087 3 1 1 120 18 33598482 33602479 TCTTATTAAGGGAAGACTTCCC 58 33598383 33598401 GTAACTGGTAGCTGGAGAG 58 NA Mus musculus 50 Pigy ENSMUSG00000043162 ENSMUST00000053386 3 1 1 61 6 57639858 57641808 GCTTAGATATGAAGCATCGAC 58 57639817 57639838 TTGGATATGCTATTCCCAACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp536 ENSMUSG00000043456 ENSMUST00000073220,ENSMUST00000063435,ENSMUST00000056338 1 3 3 187 7 38352833 38352851 TCTTCACCATCTTCCTCAG 58 38265853 38278707 TTATAGGGCTTCTCACCTG 58 NA InUTR Mus musculus 50 Mcart6 ENSMUSG00000044348 ENSMUST00000113070,ENSMUST00000113069 1 2 3 161 X 133550792 133550813 GGATGGAAATATTGGACTAAGG 58 133518151 133549804 ATGGAAGAAGCTGGTAACC 59 NA InUTR Mus musculus 50 Dmd ENSMUSG00000045103 ENSMUST00000114000,ENSMUST00000057711,ENSMUST00000113992,ENSMUST00000113991 3 4 5 80 X 82424097 82424115 GAGGTCAGATAGCAGTCAG 58 82424159 82435964 AGAAGATCTTCCTCACCCA 59 NA Mus musculus 50 Gprin3 ENSMUSG00000045441 ENSMUST00000051065 3 1 1 60 6 59303144 59303163 ACTCGAAGATCAATTTCCTC 57 59303103 59303122 CATGTTGTCTCCCTTTAAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lcn6 ENSMUSG00000045684 ENSMUST00000059693 2 1 4 193 2 25536329 25536466 GTTGTACAGTCGGACAGAG 59 25536756 25536774 GTGACTGTAGAAGAAGCGA 59 NA Mus musculus 50 Nlrp4e ENSMUSG00000045693 ENSMUST00000076470,ENSMUST00000036813 2 2 2 93 7 24140284 24146865 TGAATTTACGTGGACTTCG 57 24146922 24146940 TAGATGCTCAAGTATGGGT 57 NA Mus musculus 50 4632412N22Rik ENSMUSG00000045761 ENSMUST00000097284,ENSMUST00000112615 1 2 4 200 17 72064060 72064078 AAGGTGTCAAAGAGTCTGG 59 72065847 72066598 ATCAAAGACCTGGACTAGGT 59 NA Mus musculus 50 Kctd11 ENSMUSG00000046731 ENSMUST00000050555 1 1 1 74 11 69693420 69693438 CAGATGTAGATGTCAGCCC 59 69693364 69693382 CAGAGCTCAGCTCATAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4732496O08Rik ENSMUSG00000046862 ENSMUST00000059790,ENSMUST00000037356 1 2 2 85 4 143007856 143008752 TTGTTCAGGTACCTGAAGAC 59 143008799 143008818 TGGGACAAGGAATTCAAGTC 59 NA Mus musculus 50 Gjd3 ENSMUSG00000047197 ENSMUST00000062931 3 1 1 207 11 98844233 98844251 TGATCATGCTGATCTTCCG 59 98844044 98844062 GAGTAGATGACGAACAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 5730446C15Rik ENSMUSG00000047368 ENSMUST00000052556 1 1 1 97 19 21755449 21755470 GCTGTTATTCTTCATTCTCCTC 58 21755527 21758596 TTGTCAATGTTTGGGAATGC 59 NA Mus musculus 50 Tgif1 ENSMUSG00000047407 ENSMUST00000059775 3 1 1 81 17 71194601 71195519 CACTACAGGTCTGTAACTGG 59 71194539 71194557 TTTGGATCTTTGCCATCCT 59 NA Mus musculus 50 Rexo1 ENSMUSG00000047417 ENSMUST00000057910 3 1 3 89 10 80005761 80006056 ACTGTGAGATGTCCTACAC 58 80005690 80005708 CAAAGGTGTCATACACGAC 58 NA Mus musculus 50 A530099J19Rik ENSMUSG00000047462 ENSMUST00000062514 3 1 1 60 13 19821594 19821614 GGAACAGTTATGATGTCACAC 58 19821554 19821573 TAGTGGCAATCATTGATTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 V1rg5 ENSMUSG00000047655 ENSMUST00000050416 1 1 1 60 7 12432382 12432402 GCTTATCGAATAACAAGAGGG 58 12432422 12432442 CTTGGAAGCAACACAATAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trpt1 ENSMUSG00000047656 ENSMUST00000088223 3 1 1 150 19 7072776 7072794 TACTAAAGGGCTTGTCACG 59 7073049 7073160 AAAGGGATTCCATCTGTGAG 59 NA Mus musculus 50 Olfr1403 ENSMUSG00000049605 ENSMUST00000059754 1 1 1 60 1 175201123 175201142 GATCTCAGTAACTTACACGG 57 175201164 175201183 TCTCAAGGTATACACCACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Slc17a5 ENSMUSG00000049624 ENSMUST00000052441 1 1 1 88 9 78388791 78400753 ATATCGCTCCTTCGTATGC 59 78388721 78388739 TTTAGCAATGATGGGTCCC 59 NA Mus musculus 50 Prm3 ENSMUSG00000050058 ENSMUST00000050864 1 1 1 130 16 10790890 10790908 GTCCTCCATGAAGAAGCTC 59 10790778 10790796 GGATTTGCTCCTCTTCCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Maml1 ENSMUSG00000050567 ENSMUST00000059458,ENSMUST00000102771 3 2 2 103 11 50074555 50074573 GAAACAACAGTTTCAGCGT 59 50072322 50074488 CAGAAGGTCCTGTGAACTG 59 NA Mus musculus 50 Txndc2 ENSMUSG00000050612 ENSMUST00000050236 1 1 1 60 17 65987063 65987081 CAGAATGATGAAGCCACTC 58 65987021 65987040 CAAGAATATCACATCCTCGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Fhad1 ENSMUSG00000051435 ENSMUST00000105780,ENSMUST00000051924 1 2 4 80 4 141528753 141528772 GAGGAGGTAAATCGACTGAG 59 141520578 141528710 CATCACTGAACACCTGGAG 59 NA Mus musculus 50 1810063B05Rik ENSMUSG00000051671 ENSMUST00000059093 1 1 1 206 8 128946598 128946616 TTCCATGAAGGAAAGGCAG 59 128948958 128948976 GAAGACTGGAATCCTCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Senp8 ENSMUSG00000051705 ENSMUST00000051039 1 1 1 60 9 59585199 59585217 CAGCAAAGGAGACAAACTG 58 59585157 59585176 ATAGCTGTTCTCTTGAGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rps10 ENSMUSG00000052146 ENSMUST00000114882,ENSMUST00000114881,ENSMUST00000025052 2 3 3 60 17 27771133 27771152 GCTTGGAGACATTTCTACTG 58 27771092 27771110 GGTAGTCTCGGAGATACTG 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000052471 ENSMUSG00000052471 ENSMUST00000068783 3 1 1 62 16 91170715 91170733 CACTCAAGAGCAACAAGTG 58 91170671 91170692 TAAATGGGTAGAGTAAGGACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Arl13a ENSMUSG00000052549 ENSMUST00000064476 2 1 1 80 X 130740079 130740193 GCCAATTCTACAGAAAGATGG 59 130740234 130740253 TCCATGATGACATCTAGAGC 58 NA Mus musculus 50 Grk4 ENSMUSG00000052783 ENSMUST00000001112,ENSMUST00000074651,ENSMUST00000114320 1 3 3 102 5 35017209 35017227 AAACAGCCAATTGGAAGAC 58 35017293 35018774 TAACTTCGTACTCTGCCAC 59 NA Mus musculus 50 Sec61b ENSMUSG00000053317 ENSMUST00000065678 1 1 1 66 4 47493073 47493091 TTCTACACGGAAGATTCCC 58 47495863 47495881 ACAGAAGACTCATCACCAG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 ENSMUSG00000053583 ENSMUSG00000053583 ENSMUST00000066092 3 1 1 60 3 148848398 148848417 TTGCTTACACAATGCTTTCC 59 148848357 148848375 ATCTGTGACTACAACGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Atf7ip ENSMUSG00000053935 ENSMUST00000066689 2 1 1 61 6 136557641 136557660 TTCCAGATTGGAAAGAAGGT 58 136557684 136557702 ATCCACAAGTGCATTTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 D630008O14Rik ENSMUSG00000054006 ENSMUST00000066789 1 1 1 89 1 108438997 108439015 TTGTTTCCTCCTCAGACAG 58 108439238 108464298 ATCTTGAAACCAGTCAGAGG 59 NA InUTR Mus musculus 50 Lrtm2 ENSMUSG00000055003 ENSMUST00000068351,ENSMUST00000112756 2 2 2 131 6 119267528 119270456 AGTGGTTCTCCTACAGAGG 59 119267415 119267433 TGTTCTCATCCTCTAGCTG 58 NA DesignNoJunction Mus musculus 50 St3gal5 ENSMUSG00000056091 ENSMUST00000069994,ENSMUST00000114112 3 2 2 87 6 72092467 72097073 GTGGTAATAAGGTTGAACAGTG 59 72097121 72097139 CCTCTGGGTAAGTCATCCT 59 NA Mus musculus 50 Nat3 ENSMUSG00000056426 ENSMUST00000070514 3 1 1 228 8 70047817 70047925 GCCAGACTGAATTATCAGAC 58 70071406 70071424 GTTTGTTGCTGGACTTCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Ces1 ENSMUSG00000057074 ENSMUST00000044602 1 1 1 81 8 95852422 95855044 GATTCTTCAGCACAGAGGA 58 95852359 95852377 TCTTGGACCCAATGTAGTG 58 NA Mus musculus 50 Sept11 ENSMUSG00000058013 ENSMUST00000074733 2 1 1 60 5 93568544 93568563 AACAAATCCACTTCTCAAGG 58 93568586 93577427 CAATACCTGTCTCACCCAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Xlr3c ENSMUSG00000058147 ENSMUST00000080839 1 1 1 80 X 70505461 70506858 TCCAAGAATTCGAAGAGCC 59 70505399 70505419 TGAAAGATGAGGTCATGATCC 59 NA Nonspecific Mus musculus 50 NP_034802.1 ENSMUSG00000058172 ENSMUST00000076906 2 1 1 123 16 89031949 89031967 CAACAACCAGAACCATGTG 59 89032054 89032072 TAGTAGGAGCCATAACCAC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 V1rc6 ENSMUSG00000058731 ENSMUST00000071304 1 1 1 60 6 57208283 57208304 GGTTCACATAATCATGTTCCTC 59 57208324 57208343 AAACCCAAATATGTCTGCGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 C1qtnf3 ENSMUSG00000058914 ENSMUST00000022853 3 1 1 80 15 10905374 10905392 GAAGCATGAGGACGTAGAG 59 10905434 10908279 GTTTCATAGCTGTACATGCTG 59 NA Nonspecific Mus musculus 50 2810408P10Rik ENSMUSG00000059423 ENSMUST00000105718,ENSMUST00000091484 2 2 2 104 4 147202854 147202872 TTCACTCAGGAAGAATGGG 58 147202569 147202786 CCAATTGTAGCCTATGGCA 59 NA Mus musculus 50 Tnip2 ENSMUSG00000059866 ENSMUST00000030991,ENSMUST00000087737 3 2 2 110 5 34842213 34842231 AAATAAGTGACTGTGCGGA 59 34841933 34842140 CCTTGTAAGCAAGAATCTGC 59 NA Mus musculus 50 Trim55 ENSMUSG00000060913 ENSMUST00000029139 2 1 1 93 3 19561871 19570932 AACTATTGAGGAGTGCTGC 59 19570988 19571007 CATTTCAGTCTTCCTCTCCT 58 NA Mus musculus 50 Cyp4f39 ENSMUSG00000061126 ENSMUST00000003413 3 1 1 80 17 32628089 32628108 AATTATCTGCTTGGTCAGCA 59 32628146 32628768 CGGTAAGGATTGTATACCTTAGAG 59 NA Mus musculus 50 Zic2 ENSMUSG00000061524 ENSMUST00000075888 3 1 1 82 14 122877853 122877872 AGATAAGCCCTATCTCTGCA 59 122877917 122878121 ACTCATGGACCTTCATGTG 59 NA Nonspecific Mus musculus 50 Olfr815 ENSMUSG00000061961 ENSMUST00000071557 3 1 1 62 10 129339639 129339658 GTATGCTCGGGAATTTAGCT 59 129339596 129339614 TTGGTGTCTTGAGAATGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:2384842 ENSMUSG00000061980 ENSMUST00000068580 2 1 1 94 17 24018431 24019431 TGATTGTTGGAATTCAGCTC 58 24019488 24019506 CTTAGACAGTCTGGCTACC 58 NA Nonspecific Mus musculus 50 Gmfb ENSMUSG00000062014 ENSMUST00000079314 3 1 2 111 14 47435881 47435899 AGATTGACAAGGATGAACG 57 47434651 47435277 TACACAATGAAGGTTCGAG 57 NA Mus musculus 50 Olfr294 ENSMUSG00000062042 ENSMUST00000078588 3 1 1 60 7 93764733 93764754 ATGAGTAGTCGTAACTGTATGC 59 93764694 93764713 CAAACAGAATTCCAGTAGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Fmr1nb ENSMUSG00000062170 ENSMUST00000071848 3 1 2 80 X 66017172 66022136 TTCTTTCCAACAACCTGCA 59 66022179 66022198 TTCACTCTCGCTAAGATACG 58 NA Mus musculus 50 Kcnc3 ENSMUSG00000062785 ENSMUST00000107907,ENSMUST00000107906 2 2 2 60 7 51851270 51851288 TCATTGTCAACAACTTCGG 58 51851312 51851330 TTTGGCAATTTCTGCTTGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 2810409K11Rik ENSMUSG00000063535 ENSMUST00000032622 1 1 1 92 7 7088064 7088084 GAATGGAGACTACTTGATGAC 57 7086951 7088013 AGGTATAAGTCCTAATGAGGAC 58 NA Mus musculus 50 Cnfn ENSMUSG00000063651 ENSMUST00000076276 1 1 1 81 7 26154722 26154740 CTTAGTGTCTGCTGTCACC 59 26153471 26153491 TGACTAGTCACTGGATATGAC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Trerf1 ENSMUSG00000064043 ENSMUST00000077951 2 1 2 82 17 47490824 47490842 CACCATCTCACAGTACCAC 59 47490888 47495871 CTTAAAGAAGACCTTGCCAC 58 NA Mus musculus 50 Olfr954 ENSMUSG00000064173 ENSMUST00000080329 2 1 1 60 9 39269766 39269785 CTGTTGCTGTCTTCTATGGT 59 39269808 39269826 GAACTTACTCGTGATGGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-350 ENSMUSG00000065573 ENSMUST00000083639 1 1 1 64 1 178702520 178702538 CAAGAGTAAAGTGCATGCG 59 178702474 178702492 AAAGTGTATGGGCTTTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 E230001N04Rik ENSMUSG00000066170 ENSMUST00000095448 2 1 1 60 17 28660937 28660957 CAATGGCGCTATTAATGTCAG 59 28660978 28660997 ATTACATAGCAGTTTGGTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hmgb1 ENSMUSG00000066551 ENSMUST00000085546,ENSMUST00000110505,ENSMUST00000093196 3 3 3 93 5 149861365 149861383 GAGATGTGGAACAACACTG 58 149860477 149861308 AGGCAGCAATATCCTTCTC 59 NA Nonspecific Mus musculus 50 Olfr5 ENSMUSG00000066844 ENSMUST00000086319 3 1 1 61 7 6433856 6434838 TCTGTACAGATGGAGAGGT 58 6433813 6433831 AAGATGAACTGCTGAACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tuba3b ENSMUSG00000067702 ENSMUST00000088246 1 1 1 67 6 125231028 125231046 CAACCATCAAGACAAAGCG 59 125228664 125231000 AATACCCACCTTAAATCCAGTC 59 NA DesignRelaxed Mus musculus 50 Zfyve19 ENSMUSG00000068580 ENSMUST00000090174,ENSMUST00000102519 3 2 2 156 2 119034901 119034919 CACCCTCTTCAAGAAGGAG 59 119036337 119036532 ATTGTCAGAAGACCCTCTG 58 NA Mus musculus 50 V1rh21 ENSMUSG00000069294 ENSMUST00000091734 3 1 1 60 13 22420023 22420043 GTTGTTTACTTGGCAAGAGTG 59 22420065 22420083 CAGTGAGGAGACTACTGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 E330014E10Rik ENSMUSG00000070677 ENSMUST00000094593 2 1 1 60 5 95912150 95913128 ATCAGATACTAGGGTGCCT 59 95913152 95913170 ATTAGGCAGTGAGTGATGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Zfp804a ENSMUSG00000070866 ENSMUST00000047527 2 1 1 101 2 82076013 82076032 TTTACTGTGAGCTTTGTGAC 58 82076096 82093633 TCAGTTCTTTGAGCCTCTG 59 NA Mus musculus 50 Bves ENSMUSG00000071317 ENSMUST00000095715 1 1 1 80 10 45059195 45059213 AGTTGGTTTGCTAATTCCC 57 45059255 45062852 TAAAGGGTACATCCTAGAGAC 57 NA Mus musculus 50 Spin4 ENSMUSG00000071722 ENSMUST00000096367 3 1 1 60 X 92221031 92221050 CTCTATATGTACACCCTGCT 57 92220990 92221009 AATCTGGAATGATACGCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 A530040E14Rik ENSMUSG00000072109 ENSMUST00000093501 2 1 1 129 1 85103256 85103770 CCTTGGAGATCAATAGAGCTC 59 85103858 85108078 GGGTGAAGGTTATCTTTAACTG 58 NA InUTR Mus musculus 50 EG434172 ENSMUSG00000072259 ENSMUST00000097044 2 1 1 60 7 48544923 48544941 CCTCTCACACTTCATTCCA 58 48544965 48544983 GGTGATGGTACCTTGTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 C230055K05Rik ENSMUSG00000072774 ENSMUST00000071978 3 1 1 100 5 105242831 105244026 CCTTTGAGTGTAACCATTGTG 59 105242751 105242770 TTGGGTACATGCATAGTGTC 59 NA Mus musculus 50 ENSMUSG00000073453 ENSMUSG00000073453 ENSMUST00000097391 1 1 1 60 17 15486587 15486605 CACATGCCAGATTCTTCAG 58 15486545 15486563 TTGACAGATCTTACTGCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Serpinb3c ENSMUSG00000073601 ENSMUST00000027565 2 1 1 81 1 109173479 109173497 GCATGATAACAGCACTAGG 57 109172882 109173435 TTGCATTGAAGAACCTTCTC 58 NA Mus musculus 50 Ccl21c ENSMUSG00000073869 ENSMUST00000098114 3 1 1 173 4 42626116 42626134 TCTAAGCCTGAGCTATGTG 58 42626271 42626371 CTGTTCAGTTCTCTTGCAG 58 NA Nonspecific Mus musculus 50 Olfr555 ENSMUSG00000073970 ENSMUST00000098220 1 1 1 60 7 109807703 109807721 AGATTTGTGGCTATCCGAG 59 109807743 109807763 CAATAAGCCCATGAGTAAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kbtbd5 ENSMUSG00000074001 ENSMUST00000098272 2 1 1 91 9 121691712 121691730 ACTCTTTATGCCTTGGGTG 59 121691784 121692414 TCGTTGTATCTCCAGATGTC 58 NA Mus musculus 50 Foxl2os ENSMUSG00000074122 ENSMUST00000098459 3 1 1 189 9 98853370 98854036 GGATACAAGGGAGGATCAG 58 98853199 98853217 CTCTATCCACCTACTGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 AI452195 ENSMUSG00000074661 ENSMUST00000099179 2 1 1 107 13 110744761 110744779 TTGTCTGTTTACAACCGTG 58 110744850 110744868 TATGTCAACACCATCCCAG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 ENSMUSG00000074675 ENSMUSG00000074675 ENSMUST00000099199 3 1 1 60 10 120184685 120184704 CAACCAGCTACATAACTGAC 58 120184644 120184663 AGTATTGTTTCCAAGACTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 AU019990 ENSMUSG00000074783 ENSMUST00000099333 3 1 1 94 2 132440148 132440166 ACAGAATCCTTGGAAGCTC 59 132440223 132443451 ACTATAAGCTCCACCTTCCA 59 NA InUTR Mus musculus 50 Olfr1297 ENSMUSG00000074958 ENSMUST00000099612 2 1 1 60 2 111461866 111461884 GCTTTAATGGCCTATGACC 58 111461824 111461844 TGATGGTGAAGTAATGGAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1098 ENSMUSG00000075169 ENSMUST00000111574,ENSMUST00000099872 3 2 2 60 2 86763219 86763238 CGTTGGAGCTATAGATTCCT 58 86763178 86763196 GTTGCAGAAATCCAGTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dfnb59 ENSMUSG00000075267 ENSMUST00000099986 3 1 1 88 2 76495576 76496316 CTCTTCGAAAGAAACAGGAG 58 76496367 76496385 GGTTTGTCGTAGAAGTCAG 57 NA Mus musculus 50 IGKV12-98 ENSMUSG00000076526 ENSMUST00000103327 3 1 1 70 6 68520805 68520951 GGTGGTAAATGTGACATTCAG 59 68520983 68521001 GTGACACTTTCTCCCAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHG1 ENSMUSG00000076614 ENSMUST00000103419,ENSMUST00000103420 2 2 3 80 12 114567946 114568068 TTGCATATGTACAGTCCCAG 59 114567885 114567903 GTCAGAGTAATGGTGAGCA 58 NA Mus musculus 50 IGHG1 ENSMUSG00000076614 ENSMUST00000103419,ENSMUST00000103420,ENSMUST00000103421 3 3 3 173 12 114568701 114568719 CATCTGTCTATCCACTGGC 59 114568546 114568564 GAGTGTAGAGGTCAGACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV9-2 ENSMUSG00000076663 ENSMUST00000103472 1 1 1 69 12 115347395 115347413 ATATCCAATGCACTGGGTG 59 115347344 115347362 GTAGGTGTTTATCCAGCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV15D-2/DV6D-2 ENSMUSG00000076788 ENSMUST00000103598 1 1 1 92 14 53576545 53576784 TTCTCTGGATGCAATGTGG 59 53576840 53576858 ATATGAACAGTCCAGGGTG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A2AIY0_MOUSE ENSMUSG00000079170 ENSMUST00000111013 3 1 1 101 2 110936988 110937007 ATCCGTCATTTACTGATGGG 59 110934952 110935062 AATAGGATTCTCACATGGAGC 59 NA Mus musculus 50 Mtcp1 ENSMUSG00000079529 ENSMUST00000114084,ENSMUST00000033543,ENSMUST00000114083 2 3 3 60 X 72650543 72654889 ACAAGCCAACAACTATTTGG 58 72650502 72650520 ACACTTACGAAGTTCTTGG 57 NA DesignNoJunction Mus musculus 50 NP_001076016.1 ENSMUSG00000079597 ENSMUST00000114858 1 1 1 60 16 36186545 36188013 CATTAAGATGGATGTTGGTGG 59 36188034 36188053 AGAAATCCCTTTGAAGACCT 58 NA DesignNoJunction Mus musculus 50 Klra1 ENSMUSG00000079853 ENSMUST00000032288,ENSMUST00000080955,ENSMUST00000081796 1 3 3 90 6 130314362 130322846 TCTAAACTTGCCTTGAACAC 58 130314291 130314311 CACAGTTACCATTGTCTAGTC 58 NA Mus musculus 50 NP_001098658.1 ENSMUSG00000080145 ENSMUST00000116291 3 1 1 80 7 93950641 93950662 GATGCTTCTACAACATGTAGAC 58 93950702 93951427 AAAGAGAACATCTTCCAGGA 58 NA Mus musculus 50 Btc ENSMUSG00000080263 ENSMUST00000116548 1 1 1 80 5 91791378 91791396 GGTCTGCTTGATAGTGGTC 59 91789865 91791334 TGTTTCCGAAGAGGATGAC 59 NA Nonspecific Mus musculus 50 Scmh1 ENSMUSG00000000085 ENSMUST00000000087,ENSMUST00000064991,ENSMUST00000106301 2 3 4 81 4 120187807 120187826 ATTGACTGTGCTTATCACCA 59 120187870 120189499 CAAACACGGCTGAAATGAC 59 NA Mus musculus 50 Mx1 ENSMUSG00000000386 ENSMUST00000113768 1 1 2 80 16 97676750 97676768 ATGTGGACATTGCTACCAC 59 97673150 97676706 GGACCATCTCTATGGTCCT 59 NA Mus musculus 50 Epn2 ENSMUSG00000001036 ENSMUST00000001063,ENSMUST00000116368 2 2 6 107 11 61348851 61348869 ATCCTCTGAGTTAGAGCAG 57 61348105 61348780 CTTTCTGATGACTGCTCAG 57 NA Mus musculus 50 Ocrl ENSMUSG00000001173 ENSMUST00000001202,ENSMUST00000115015,ENSMUST00000115013 3 3 4 83 X 45314631 45315268 GACAATTCCTGGCAATAACC 59 45315313 45315332 TCATAACAGATGACTGGCTC 59 NA Mus musculus 50 Tnk1 ENSMUSG00000001583 ENSMUST00000001626,ENSMUST00000108631,ENSMUST00000102583,ENSMUST00000094063,ENSMUST00000108628 3 5 6 91 11 69665385 69665485 GTTGTAGAGGTAGAGCTGAG 58 69665313 69665331 ATAGCAGAAGCCACATCTC 59 NA Mus musculus 50 Akr1b3 ENSMUSG00000001642 ENSMUST00000102980,ENSMUST00000074150 2 2 2 60 6 34260951 34260969 GGGAACGTGATACCTAGTG 59 34260620 34260927 CTAGTTGTTCCATAGCCGT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ugp2 ENSMUSG00000001891 ENSMUST00000060895,ENSMUST00000102875,ENSMUST00000109575 1 3 3 80 11 21233804 21253361 AGAAGATTCGATTCAACCCT 58 21233743 21233761 ACCAACTTGTTCAACACAG 58 NA Mus musculus 50 Nfix ENSMUSG00000001911 ENSMUST00000109764,ENSMUST00000098572,ENSMUST00000063596 2 3 6 82 8 87240091 87240109 CTTCCTATGCCTGATTCCA 58 87237744 87240045 GTCGTTGTGAATGAAGGTG 59 NA Mus musculus 50 Trappc6a ENSMUSG00000002043 ENSMUST00000108455,ENSMUST00000108456,ENSMUST00000002112 1 3 3 156 7 20099806 20099824 TAGATGCCCTCAAGTTCCT 59 20100411 20100429 TCCTCTAGATACTGTGGCC 59 NA DesignNoJunction Mus musculus 50 Puf60 ENSMUSG00000002524 ENSMUST00000100527,ENSMUST00000002599 2 2 2 91 15 75902374 75902671 AACATCAAGGTGGGAAGAC 59 75902301 75902320 TATATTCGGTTGAAAGCCCT 58 NA Mus musculus 50 Ssbp2 ENSMUSG00000003992 ENSMUST00000042122 1 1 2 152 13 91704284 91803725 AGCCTTCCATGATTATCCT 57 91809339 91810008 TTTGGATGTCCTTGTTGTC 57 NA Mus musculus 50 Chn2 ENSMUSG00000004633 ENSMUST00000114402 1 1 4 177 6 54215195 54223084 TAGGATCTCTTCACTGGTC 57 54236165 54240271 TAACCCACAATCTGAACAC 57 NA Mus musculus 50 Sh2b2 ENSMUSG00000005057 ENSMUST00000005188 3 1 1 63 5 136703240 136703258 GGACAACACATTTGTGCTC 59 136701124 136701143 TGAGTCTATCGTTTCCAGGA 59 NA DesignNoJunction Mus musculus 50 Atp5g1 ENSMUSG00000006057 ENSMUST00000090541,ENSMUST00000107686,ENSMUST00000107684 1 3 3 148 11 95935349 95936314 TTTCTCCAGCTCTGATTCG 59 95934959 95934977 GACACTGGTCTGGAATTCC 59 NA Nonspecific Mus musculus 50 Defb2 ENSMUSG00000006570 ENSMUST00000006745 2 1 1 74 8 22953799 22953817 CAATGGAGGGTACTGTGTC 59 22953855 22953873 TTCTTCTCTGGGAAACAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rundc3a ENSMUSG00000006575 ENSMUST00000107103,ENSMUST00000107102,ENSMUST00000107105,ENSMUST00000006750 1 4 4 87 11 102260703 102260721 TCTAAAGGGCGAAGTTCTG 59 102260772 102260941 CAGGTAGTCGTAGCTTTGG 59 NA Mus musculus 50 Homer1 ENSMUSG00000007617 ENSMUST00000060490,ENSMUST00000079086 3 2 10 108 13 94125937 94125955 AGTATCAATGGGACAGACG 58 94126026 94157489 TGATTGCTGAACTATGTGGA 59 NA Mus musculus 50 Cav1 ENSMUSG00000007655 ENSMUST00000115456,ENSMUST00000115455,ENSMUST00000007799,ENSMUST00000115454,ENSMUST00000115453 2 5 5 60 6 17289364 17289384 CATCTACGTCCATACCTTCTG 59 17289406 17289424 GTTGCTGAATATCTTGCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Taz ENSMUSG00000009995 ENSMUST00000114182,ENSMUST00000069722,ENSMUST00000077311 3 3 4 82 X 71533367 71533385 TCTACCAGAAAGGGATGGA 59 71533430 71533527 GTTTACTTTCCCTTCTGGGA 59 NA Mus musculus 50 Pdhx ENSMUSG00000010914 ENSMUST00000011058,ENSMUST00000111183 2 2 3 82 2 102886970 102898663 AGAAAGGAAGGTGAAGCTG 59 102886906 102886924 TTTGCATCTAAGGTGACCA 58 NA Mus musculus 50 Zdhhc12 ENSMUSG00000015335 ENSMUST00000081838,ENSMUST00000102865 3 2 2 175 2 29947936 29947954 GGCTATGTGACTACTCAGC 59 29947286 29947304 GGACAGTGGTGATCATAGC 59 NA DesignNoJunction Mus musculus 50 Atp1b4 ENSMUSG00000016327 ENSMUST00000115134,ENSMUST00000016471 3 2 2 80 X 35678229 35678247 TTCAACGTTTCTGAACCTG 58 35678290 35682457 AAGACTGTCATTATAGCCCT 57 NA Mus musculus 50 Pls3 ENSMUSG00000016382 ENSMUST00000114058,ENSMUST00000114060 2 2 5 86 X 73044819 73045063 CAGTGAAGGATTCCAAAGC 58 73044751 73044770 TAATATCTATCCGTGGCTCC 58 NA Mus musculus 50 Ikzf1 ENSMUSG00000018654 ENSMUST00000065433,ENSMUST00000076700,ENSMUST00000018798,ENSMUST00000048122,ENSMUST00000078183 3 5 9 81 11 11658252 11658272 CTTTAGAGGAGCATAAAGAGC 58 11658315 11661234 TCTTCCTTAATGACTGGGT 57 NA Mus musculus 50 Tlcd1 ENSMUSG00000019437 ENSMUST00000092880,ENSMUST00000092879,ENSMUST00000108338,ENSMUST00000098545 3 4 4 84 11 77992947 77993053 CTCTGCAGGATACTTTATCC 57 77993099 77993118 ATGATGAACAAGGTATTCCC 57 NA Mus musculus 50 Rfxdc1 ENSMUSG00000019900 ENSMUST00000105477,ENSMUST00000050455 2 2 2 97 10 51433314 51435706 GCCTGAAAGTTTGTTAGCAG 59 51435766 51435784 TATCAATGAGGGCTTCTGG 58 NA Mus musculus 50 Ptprb ENSMUSG00000020154 ENSMUST00000092167 2 1 2 80 10 115809965 115809983 ACTCCGTGGACATTTATGG 59 115810026 115817900 ACACATATTGACACTCGGTC 59 NA Mus musculus 50 Cpeb4 ENSMUSG00000020300 ENSMUST00000109412 1 1 4 80 11 31789872 31789890 GTTTGACATGCACTCACTG 59 31789931 31818813 CCATAAGTCCTTGCTTTAATGG 59 NA Mus musculus 50 Phf15 ENSMUSG00000020387 ENSMUST00000109090,ENSMUST00000020655,ENSMUST00000074967,ENSMUST00000109091 1 4 4 200 11 51644124 51644767 CTCAAGGAGATGGAGAAGC 59 51643942 51643960 GTCACAGAAGACCATCTCG 59 NA Mus musculus 50 Kremen1 ENSMUSG00000020393 ENSMUST00000020662,ENSMUST00000072714 3 2 2 88 11 5138494 5143785 TATTGCAGAAATCCAGATGG 57 5138425 5138444 GGAATTTCACAGTACTTCCA 57 NA Mus musculus 50 Tcn2 ENSMUSG00000020432 ENSMUST00000109993,ENSMUST00000109991,ENSMUST00000020710,ENSMUST00000109990,ENSMUST00000109988,ENSMUST00000109992,ENSMUST00000109989 1 7 7 96 11 3819400 3822023 GAGGATTCACGTATGGGAC 59 3819322 3819340 AGGAGCTGCCAATATTCTC 59 NA Mus musculus 50 Gria1 ENSMUSG00000020524 ENSMUST00000036315 3 1 2 106 11 57124216 57131177 GGAAGTAAGGACAAGACCA 58 57131247 57131265 AACTCGATTAAGGCAACCA 59 NA Mus musculus 50 Ccl1 ENSMUSG00000020702 ENSMUST00000108188 1 1 3 117 11 81991546 81991564 TACAGAAAGATGGGCTCCT 59 81990337 81990457 TCACCTTCTTCTCACTGGA 59 NA Mus musculus 50 Exoc7 ENSMUSG00000020792 ENSMUST00000021147,ENSMUST00000106413,ENSMUST00000106411,ENSMUST00000106409,ENSMUST00000106408 2 5 6 98 11 116166357 116167714 CACTAGGAACATGGTGTCC 59 116166277 116166295 TGTAGGTTCTCTGTCTGCT 59 NA Mus musculus 50 Sec14l1 ENSMUSG00000020823 ENSMUST00000090433,ENSMUST00000021177,ENSMUST00000103026 2 3 3 92 11 116978558 117002742 ATTATGGCTGCCTATGAGAG 59 117002797 117002815 ATCCTCACTCTTGAACTCG 58 NA Mus musculus 50 Six6os1 ENSMUSG00000021098 ENSMUST00000110489,ENSMUST00000044000 1 2 2 82 12 73996018 73999480 CATATAGATGCTGAATGTGGAG 58 73993953 73995975 TCAATGTATAGGGCCTGTG 58 NA Mus musculus 50 Prl8a6 ENSMUSG00000021345 ENSMUST00000110355,ENSMUST00000018392,ENSMUST00000080762 3 3 3 135 13 27525036 27526034 GGATACTCACCAAGGTCTC 58 27524919 27524939 TGATCTATGCAGTAGGAAAGG 58 NA Mus musculus 50 Nsd1 ENSMUSG00000021488 ENSMUST00000099490 2 1 3 80 13 55340211 55346887 ATATAGGCATAAGGTTCCTCAG 58 55346927 55346946 TTGGGAACATCATATTGCTC 57 NA Mus musculus 50 Dab2 ENSMUSG00000022150 ENSMUST00000078019,ENSMUST00000110663 2 2 4 109 15 6374216 6374234 TGACCCTTGATGATCAAGC 59 6374690 6380965 GTTTGCTGAAGATGTTGGAC 59 NA Mus musculus 50 Myo10 ENSMUSG00000022272 ENSMUST00000110457,ENSMUST00000073021 1 2 4 80 15 25665781 25665799 GATCAAAGGCAAAGACGAC 59 25665843 25666169 TCAAAGTGGTTAACCTCGA 58 NA Mus musculus 50 Nell2 ENSMUSG00000022454 ENSMUST00000023090,ENSMUST00000075275 2 2 2 80 15 95215583 95260322 TAAGGAGTGCAAATCAACC 57 95215521 95215540 CCAGAAGATGAGTATACCGT 58 NA Mus musculus 50 Tfg ENSMUSG00000022757 ENSMUST00000065515,ENSMUST00000023440 1 2 2 89 16 56694590 56697579 GATTGAAGGTCAGATGTACCA 59 56694521 56694539 TGAACACCATACTGCTGAG 59 NA Mus musculus 50 Arl13b ENSMUSG00000022911 ENSMUST00000023628 2 1 3 84 16 62827062 62827080 ATTCCAGTGATGAGGAGAG 58 62800160 62827015 CTGAGTCCTTCTGATATCCT 57 NA Mus musculus 50 Synj2 ENSMUSG00000023805 ENSMUST00000080283,ENSMUST00000115791,ENSMUST00000061091 1 3 7 80 17 5986232 5990143 TCTTTCTTCTGGAACCAGC 59 5990187 5990205 GATGACTTTCAGCAACCAG 58 NA Nonspecific Mus musculus 50 Cenpq ENSMUSG00000023919 ENSMUST00000087114 2 1 2 86 17 41061307 41061461 AGGTGAAACAGGTATTTCAC 57 41061240 41061260 GAAGTATGGGTGCTTTAAGAC 58 NA Mus musculus 50 Arhgap28 ENSMUSG00000024043 ENSMUST00000024840 3 1 2 98 17 68202318 68202336 CTTCTGTCCAAAGTGTCCA 59 68198445 68202258 AGATGAACCATGACTGTTCTC 59 NA Mus musculus 50 Clip4 ENSMUSG00000024059 ENSMUST00000024854,ENSMUST00000112611 3 2 2 81 17 72150162 72150180 GAACGATAGAGACGGACTG 59 72150225 72151125 CTCAATATCACCGATGCCA 59 NA Mus musculus 50 Thada ENSMUSG00000024251 ENSMUST00000047524 1 1 2 80 17 84851226 84853947 CAAGTGCTGAAGTTTGCTG 59 84851164 84851182 CATGGCAACTCTAACACCT 59 NA Mus musculus 50 Cdh2 ENSMUSG00000024304 ENSMUST00000115852,ENSMUST00000025166 3 2 2 87 18 16808998 16933028 CCCTTCTCAATGTGAAATTCAG 59 16808932 16808950 TCGTCCACCTTGAAATCTG 59 NA Mus musculus 50 Mapk4 ENSMUSG00000024558 ENSMUST00000091851,ENSMUST00000025442 3 2 2 102 18 74129615 74129633 CCAACATCTTCATCAGCAC 58 74096915 74129550 TCTGACAGATAACCCTTGTG 59 NA Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000111657,ENSMUST00000111658,ENSMUST00000111654,ENSMUST00000111652 3 4 15 115 19 55829570 55892272 CAGTATCTTCAGATGAAATGGC 59 55892347 55982923 ACTTTGTTCGAAACGATGTG 59 NA Mus musculus 50 D19Ertd652e ENSMUSG00000025067 ENSMUST00000026048 1 1 2 80 19 47870235 47871610 CTGAAGACTCAAGCAACAG 58 47870173 47870191 GTAGACATAGCCATCCACC 59 NA Mus musculus 50 Csnk1d ENSMUSG00000025162 ENSMUST00000096557,ENSMUST00000018274,ENSMUST00000070575,ENSMUST00000106124 1 4 4 80 11 120833737 120833756 AGTATGAGAGGATCAGTGAG 57 120833015 120833694 ATGTGGCAAATTCAGAAGG 58 NA Mus musculus 50 Sectm1a ENSMUSG00000025165 ENSMUST00000026162 3 1 4 86 11 120930391 120930910 ATATCTTAGAGCCTTCCAACG 59 120930137 120930155 CTATTGGAGAGCTCTTCGC 59 NA Mus musculus 50 Bsnd ENSMUSG00000025418 ENSMUST00000054472 3 1 1 141 4 106160632 106160650 ACTTCCAAGGCATCTTGTC 59 106159369 106159387 TGGATGTGAGTGAAGTCTG 58 NA DesignNoJunction Mus musculus 50 Nnt ENSMUSG00000025453 ENSMUST00000109208,ENSMUST00000109206,ENSMUST00000109205,ENSMUST00000099149,ENSMUST00000069902 1 5 6 81 13 120125205 120127192 GTCCAAACAGGTCATTGTC 58 120125142 120125162 GTTAGGTTTGTAGAAGATCGG 58 NA Mus musculus 50 Nnt ENSMUSG00000025453 ENSMUST00000109208,ENSMUST00000109206 3 2 6 96 13 120168490 120168586 GACTAGGTCAGATTGTGAGG 59 120168150 120168169 TTGTACATCCATAGACCTGG 58 NA Mus musculus 50 Hgs ENSMUSG00000025793 ENSMUST00000106205 1 1 3 160 11 120340061 120340415 TTAGTGAGTACCAGAATGGG 58 120340538 120340556 GATGGACTGGAAGAGTGAC 59 NA Mus musculus 50 Pip5k3 ENSMUSG00000025949 ENSMUST00000114042,ENSMUST00000097708,ENSMUST00000081154,ENSMUST00000097707 3 4 4 84 1 65299085 65299103 GGAGTTGGATTCTCCAGTG 59 65299150 65299937 AACTGGTGTTACTTGTTTGC 59 NA Mus musculus 50 Atg16l1 ENSMUSG00000026289 ENSMUST00000113190 3 1 4 107 1 89671434 89671664 AATATCTTTGGTCTGTCCGA 58 89672362 89672380 AGTGTCCATGATATCCTGG 58 NA Mus musculus 50 Dbi ENSMUSG00000026385 ENSMUST00000027634,ENSMUST00000094616 1 2 2 193 1 122016572 122017522 GGCTGAATTTGACAAAGCC 59 122010099 122012969 CCTTGGAAGTCCCTTTCAG 59 NA Nonspecific Mus musculus 50 Cyb5r1 ENSMUSG00000026456 ENSMUST00000049223 1 1 2 80 1 136304267 136304399 TTATGCTGGGAAAGAATCTG 57 136304442 136304460 GCCTTTCCATATAGCATGG 58 NA Mus musculus 50 Lpgat1 ENSMUSG00000026623 ENSMUST00000110855,ENSMUST00000027932,ENSMUST00000110856,ENSMUST00000094180 3 4 4 81 1 193584114 193587429 GCTAGAGGCTTAGAATGCA 59 193587474 193587492 CTATTGGTTCAGCTTTGGG 58 NA Mus musculus 50 Frmd4a ENSMUSG00000026657 ENSMUST00000091497,ENSMUST00000115037,ENSMUST00000115042,ENSMUST00000075767,ENSMUST00000115039 1 5 5 82 2 4434845 4434863 ATGTTGACAGTGAAGTGGT 59 4436060 4450850 CACCACCTCATTGCTAGAG 59 NA Mus musculus 50 Nuf2 ENSMUSG00000026683 ENSMUST00000111368,ENSMUST00000028000 3 2 3 96 1 171436180 171436199 TGTAAAGAAGGAGAAGCTCG 59 171434722 171436122 ATTGCAGTCTTCAATCATGG 58 NA Mus musculus 50 Tnn ENSMUSG00000026725 ENSMUST00000039178 2 1 4 84 1 162052837 162052856 GTACAAGGTGGATGTATGGG 59 162050879 162052790 AGGGCTGTCAATATCTGTG 59 NA Mus musculus 50 Pfkfb3 ENSMUSG00000026773 ENSMUST00000114846,ENSMUST00000114845,ENSMUST00000028114,ENSMUST00000100411,ENSMUST00000049849 3 5 7 132 2 11403719 11403737 TGCCATACCTGAAATGTCC 59 11401988 11403505 TTCTTTGCATCCTCTGACC 59 NA Mus musculus 50 Zbtb43 ENSMUSG00000026788 ENSMUST00000113156 3 1 3 82 2 33317840 33317858 TATTCATCCCAGATAGGGC 57 33310634 33317794 TTGTTTAGTGTGGTTCGAC 57 NA InUTR Mus musculus 50 Acvr1c ENSMUSG00000026834 ENSMUST00000112607 3 1 4 81 2 58137404 58168215 ACCTTCCCACAGATAATGG 58 58137341 58137361 AAATAGTCATACAAGGAGCCC 59 NA Mus musculus 50 D730039F16Rik ENSMUSG00000026870 ENSMUST00000113068,ENSMUST00000028228,ENSMUST00000047447 1 3 3 60 2 34737916 34737934 TGTCAACTGTCCCAATGAG 59 34741391 34741409 CTTCTTATCCAGGATGGCC 59 NA DesignNoJunction Mus musculus 50 Sdccag3 ENSMUSG00000026927 ENSMUST00000114102,ENSMUST00000114100,ENSMUST00000028293,ENSMUST00000077983,ENSMUST00000057204,ENSMUST00000114097 3 6 7 89 2 26240338 26240618 AATAAATTTGCTTCAGGCCC 59 26240268 26240286 TTCACTACAGAAAGGCTGG 59 NA Mus musculus 50 Neb ENSMUSG00000026950 ENSMUST00000069592 3 1 6 81 2 52082161 52082777 AACTGCAGAGTGATAGTGTG 59 52082099 52082117 ATTTCTATGGAGCCTTCCG 59 NA Mus musculus 50 Hoxd8 ENSMUSG00000027102 ENSMUST00000111987,ENSMUST00000074721,ENSMUST00000019749 2 3 3 60 2 74544094 74544112 AGTGGTAATATTGGCGAGG 59 74544136 74544154 ACATTTGAGAAGGAGACGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cd82 ENSMUSG00000027215 ENSMUST00000028644,ENSMUST00000099696,ENSMUST00000111257 3 3 5 81 2 93270340 93270358 CCATCACCATAGTGATGGG 59 93270166 93270296 AAGACAAAGTACAGACCCAG 59 NA Mus musculus 50 Spint1 ENSMUSG00000027315 ENSMUST00000028783,ENSMUST00000110816,ENSMUST00000110817 3 3 3 80 2 119072372 119073753 TCAGTGACAAAGGGTACTG 58 119073797 119073815 ATGGGTTGTAATACCAGCG 59 NA Mus musculus 50 Spint1 ENSMUSG00000027315 ENSMUST00000028783,ENSMUST00000110816,ENSMUST00000110817 2 3 3 80 2 119071313 119071331 GAACTGACTCAGACCAACC 59 119071374 119071481 GGCAATAATCTTCTGTCTGC 58 NA Mus musculus 50 8430406I07Rik ENSMUSG00000027424 ENSMUST00000110028,ENSMUST00000110027,ENSMUST00000028910 2 3 3 91 2 144104790 144104808 TACATATGACAACCCGCTG 59 144104860 144105235 CAATTAATCCACACTGAACCTG 59 NA Mus musculus 50 Cstf1 ENSMUSG00000027498 ENSMUST00000029000,ENSMUST00000116375 1 2 2 92 2 172201332 172201350 TTGATAGCCACAGGATCTG 58 172201406 172201560 CATCATGACCTCAATTGGC 58 NA Mus musculus 50 Zfp64 ENSMUSG00000027551 ENSMUST00000109162,ENSMUST00000087971,ENSMUST00000045842,ENSMUST00000109161 2 4 5 192 2 168777203 168777221 TCTGTAAGCAGCACTTCAG 59 168766383 168777047 AACTCTGGAGCTGAAACTG 59 NA Mus musculus 50 Zbtb46 ENSMUSG00000027583 ENSMUST00000029106,ENSMUST00000087409 2 2 2 81 2 181146673 181158131 AGACTCAAATGTAGACCTGAC 59 181146612 181146631 GATGTGAGCATAGAGCTCTG 59 NA Mus musculus 50 Epb4.1l1 ENSMUSG00000027624 ENSMUST00000069919,ENSMUST00000109574 3 2 12 119 2 156335032 156336478 GCCTTGATGGAGAGTTCTC 59 156336561 156336579 CTTCTTCAGCCTCTGATCG 59 NA Mus musculus 50 Slc16a4 ENSMUSG00000027896 ENSMUST00000029502 3 1 2 171 3 107106122 107106141 CTTATGGCCTATACCATCCT 58 107107413 107114362 ATATCCAGCCTGCTATTGG 58 NA Mus musculus 50 Hax1 ENSMUSG00000027944 ENSMUST00000094296 1 1 2 135 3 89800216 89801738 GGCTTTGATGATCTATTGGA 57 89799971 89799989 TGAAATACGATTTGGGCTG 58 NA Nonspecific Mus musculus 50 Ndst3 ENSMUSG00000027977 ENSMUST00000106420,ENSMUST00000029602 3 2 4 95 3 123309944 123330889 AAAGTTTGCCTTAGAGCAC 58 123309867 123309886 TCATAAAGCTGAACATGGAC 57 NA Mus musculus 50 Efna4 ENSMUSG00000028040 ENSMUST00000029674 2 1 1 126 3 89139118 89139136 CTTTGAGTTCTTGCCTGGA 59 89138335 89138353 AGCTGACTCATGTGATGAC 59 NA DesignNoJunction Mus musculus 50 Ppp3ca ENSMUSG00000028161 ENSMUST00000056758 1 1 3 80 3 136594996 136598002 CTGATGAAGCCATCAAAGG 58 136598046 136598064 CGTTAATTCGGTCTAAGCC 58 NA Mus musculus 50 Asph ENSMUSG00000028207 ENSMUST00000108339,ENSMUST00000078139,ENSMUST00000108340,ENSMUST00000029860,ENSMUST00000108337,ENSMUST00000084915,ENSMUST00000108335,ENSMUST00000108334,ENSMUST00000108333,ENSMUST00000076014,ENSMUST00000029858,ENSMUST00000098276 2 12 17 92 4 9529616 9529634 TACCATGTGGAAGACACAG 58 9525432 9528456 TTGGTGTCTTACTTCCTCTG 58 NA Mus musculus 50 Gbp3 ENSMUSG00000028268 ENSMUST00000106222,ENSMUST00000029935,ENSMUST00000106221 1 3 3 80 3 142228336 142228354 TGGAGCTGAAGTTAAATGG 57 142228398 142229318 GATTGTCTCCTTGGATCAG 57 NA Mus musculus 50 Casp8ap2 ENSMUSG00000028282 ENSMUST00000029950 1 1 3 100 4 32721849 32726348 TTCACCAAAGATTGTCTGAG 57 32726410 32726429 TGAACAATCATCCAAATGGG 58 NA Mus musculus 50 Exosc3 ENSMUSG00000028322 ENSMUST00000107799,ENSMUST00000030003 1 2 2 166 4 45332554 45355547 GTATGTACCTGTGAAAGGG 57 45330686 45332424 AGATGAGATCTCCAACCTG 58 NA Mus musculus 50 3110001D03Rik ENSMUSG00000028398 ENSMUST00000030103 3 1 1 120 4 74923954 74923972 ACCTACGTCTATTTGGTGG 58 74923641 74923660 CTACCAGAACAACTACACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc44a1 ENSMUSG00000028412 ENSMUST00000107646 1 1 5 93 4 53558632 53562870 TTAAACCAGGTTTGCATGC 59 53562927 53562945 GTCTCTTGTCTGAGATGCC 59 NA Mus musculus 50 Aqp7 ENSMUSG00000028427 ENSMUST00000116345,ENSMUST00000054945,ENSMUST00000030136 3 3 3 87 4 40981489 40981801 CAAACAAGTGTTCAGAGCC 59 40981420 40981442 GTATACAATACCACCTAGGTAGG 59 NA Mus musculus 50 Cd72 ENSMUSG00000028459 ENSMUST00000107925,ENSMUST00000107926,ENSMUST00000030179,ENSMUST00000098105,ENSMUST00000098104 3 5 5 145 4 43463084 43465187 ATTCATCAGACACCTGCTG 59 43462957 43462975 AGAAGGTTCATCGAATGCT 58 NA Mus musculus 50 Ppt1 ENSMUSG00000028657 ENSMUST00000030412,ENSMUST00000097902,ENSMUST00000097901 2 3 3 81 4 122523277 122525686 ACATCAAGGTGTCTTTGGA 58 122525731 122525749 GGCATTAAGTGACTTCCTG 58 NA Mus musculus 50 4931403E03Rik ENSMUSG00000028753 ENSMUST00000030533 3 1 2 183 4 138134572 138134591 ATAAACAAGAGGCAGTACCT 58 138128550 138131223 CTTGTAGGGCTAGAGTCTG 58 NA Mus musculus 50 Eya3 ENSMUSG00000028886 ENSMUST00000105928 2 1 6 84 4 132236734 132236752 ACAGTGTTCTTACCTGCAC 59 132236800 132245629 GTGCTTGAAGCTTGAATGG 59 NA Mus musculus 50 Epb4.1 ENSMUSG00000028906 ENSMUST00000105974,ENSMUST00000105979 1 2 14 115 4 131553448 131559509 TGTTGTAGAGACATGGCTG 59 131547139 131547157 CTGTTAATTGTGCTGGGTC 58 NA Mus musculus 50 Ube4b ENSMUSG00000028960 ENSMUST00000103212,ENSMUST00000084123 2 2 2 80 4 148739636 148742418 TTCAAGCAGATCTTTATCCC 57 148739575 148739594 CTTAAAGTAGTCGCTTTCCA 57 NA Mus musculus 50 Mll5 ENSMUSG00000029004 ENSMUST00000094962,ENSMUST00000056291,ENSMUST00000115128 1 3 4 80 5 23002302 23002321 GAGTCCTACAGTTAATGGTG 57 23002364 23002805 AGTGGTGTGGTTAAATCTG 57 NA Mus musculus 50 Zfp509 ENSMUSG00000029127 ENSMUST00000094833 2 1 4 85 5 38604603 38604622 CAGTATGCATGTGAATTGTG 57 38601894 38604555 GGTTTCTCACCTGTATGAG 57 NA Mus musculus 50 Plb1 ENSMUSG00000029134 ENSMUST00000101377,ENSMUST00000101376 2 2 3 80 5 32631458 32632230 CATAAGGAGGTACCCAGAG 58 32632273 32632292 GTTCTTCAGGAATACTTCCC 57 NA Mus musculus 50 Ncor2 ENSMUSG00000029478 ENSMUST00000111398,ENSMUST00000111402,ENSMUST00000111401,ENSMUST00000111393,ENSMUST00000086083,ENSMUST00000055256 2 6 8 152 5 125583062 125586579 ATGAGAACCGGAAGAAAGC 59 125572059 125572077 ACAAGATCAGCTTCTTCCG 59 NA Mus musculus 50 Anxa3 ENSMUSG00000029484 ENSMUST00000031447 2 1 2 82 5 97259434 97259452 TAGCCAGAAGGACATTGAG 58 97259498 97263802 CACAATGAACTATGGCCAG 58 NA Mus musculus 50 Wasl ENSMUSG00000029684 ENSMUST00000041737 3 1 2 93 6 24583197 24583844 GAAATCTGCCTTAAGAACTGTC 59 24583125 24583143 AGAAACAGCATGAGTCCAG 59 NA Mus musculus 50 Dync1i1 ENSMUSG00000029757 ENSMUST00000115558,ENSMUST00000115554 2 2 5 83 6 5719717 5719735 TCCCTCTTCGAAATCAGTG 58 5719781 5750783 AGTCGTCTCCTTGTTAATGG 59 NA Mus musculus 50 Klrk1 ENSMUSG00000030149 ENSMUST00000095412,ENSMUST00000032252 3 2 2 82 6 129562908 129564628 TACAATCAGTTAACTCTGGTGG 59 129562847 129562865 CAGTCTTCTGTGTAAGCCT 58 NA Mus musculus 50 Ccdc77 ENSMUSG00000030177 ENSMUST00000112703,ENSMUST00000032283 1 2 2 82 6 120279166 120279184 AGTAGAAGGCTTCAAGACG 59 120275502 120279120 TCATGGTTGCCTTGTAGAG 59 NA Mus musculus 50 Itpr2 ENSMUSG00000030287 ENSMUST00000079573 2 1 3 82 6 146366528 146371237 GGGTGATAATGTGAATGCTG 58 146366465 146366484 CATCCTCTCGATAGGAACTG 59 NA Mus musculus 50 Rasgrp4 ENSMUSG00000030589 ENSMUST00000094617,ENSMUST00000032810 2 2 2 128 7 29923932 29924077 CTTCATATCCTAAGGCTGCC 59 29925304 29925322 TTATGACTGCTTCCAGCTG 59 NA Mus musculus 50 Slco2b1 ENSMUSG00000030737 ENSMUST00000032985,ENSMUST00000107088,ENSMUST00000107086 2 3 3 80 7 106819510 106819528 AGCCTTTAAAGAAACAGGC 58 106815748 106819466 CCCTAGGGAAGACTTTGAC 58 NA Mus musculus 50 Tgfb1i1 ENSMUSG00000030782 ENSMUST00000070656,ENSMUST00000033046,ENSMUST00000092080,ENSMUST00000098011 3 4 4 97 7 135392697 135392820 TGTTCAGAACCATCTTCCAG 59 135392880 135392898 CTTTGCTAGTCTGTCCTGG 59 NA Mus musculus 50 2610020H08Rik ENSMUSG00000030924 ENSMUST00000033218 3 1 2 88 7 126944795 126944813 TCTGAAGGGAATGAGTCAG 58 126944864 126946267 GCAAGCTGAATTTATGTCTG 57 NA Nonspecific Mus musculus 50 Gp2 ENSMUSG00000030954 ENSMUST00000079898,ENSMUST00000033255 2 2 2 80 7 126598152 126600685 AATACATCAAGGTTATGGGAGG 59 126598093 126598111 CCAGAACTTGGAGAGTCAG 59 NA Mus musculus 50 Cacna1f ENSMUSG00000031142 ENSMUST00000115725 1 1 4 80 X 7203973 7203991 CTGGAATACGTTTGATGCT 57 7204034 7205043 CTGTCCTCTGAACTATTGAC 57 NA Mus musculus 50 Col4a5 ENSMUSG00000031274 ENSMUST00000112931,ENSMUST00000112930,ENSMUST00000087358,ENSMUST00000033630 3 4 4 80 X 138120690 138120709 AGCCAGACTATTCAGATTCC 58 138120751 138121117 ACTTGTATGCATCATGAAGG 57 NA Mus musculus 50 Flna ENSMUSG00000031328 ENSMUST00000114299,ENSMUST00000033699,ENSMUST00000101454,ENSMUST00000114288,ENSMUST00000114289,ENSMUST00000114298 3 6 7 81 X 71475726 71475853 CAAGTTACAGCTTTGGCTG 59 71475663 71475683 GATAGTTATACTGTGGAGCCA 58 NA Mus musculus 50 Irak1 ENSMUSG00000031392 ENSMUST00000114352,ENSMUST00000068286,ENSMUST00000114360,ENSMUST00000114339,ENSMUST00000033769,ENSMUST00000114354,ENSMUST00000114353,ENSMUST00000073369,ENSMUST00000101458 2 9 13 80 X 71267297 71267537 GAACAGCTATCAAGGTTTCG 58 71267236 71267254 AACAAGGCAGTATAAGCCA 58 NA Mus musculus 50 Sh3rf1 ENSMUSG00000031642 ENSMUST00000093488,ENSMUST00000110291,ENSMUST00000034060 1 3 3 133 8 63808265 63808283 GACAAAGATTGCCTTCCCT 59 63808808 63828207 GCTGAGTTAAACTCCACGT 59 NA Mus musculus 50 Bckdhb ENSMUSG00000032263 ENSMUST00000116537,ENSMUST00000034801 1 2 3 94 9 83903876 83903894 TAGAACCCTACAAGATCCC 57 83903952 83906127 GATGACATGAACCTGAGTG 57 NA Mus musculus 50 A930018P22Rik ENSMUSG00000032671 ENSMUST00000040374 1 1 1 132 2 103963304 103963322 CTCTGCGCTTCTTCTACTC 59 103963417 103963436 TTAATCCGGATCTCTAGCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nlrp3 ENSMUSG00000032691 ENSMUST00000101147 2 1 4 104 11 59365430 59371889 ATTCAGAGACTGTGGTTGG 59 59371957 59371975 TCCAATGTACAGTCTGGTC 58 NA Mus musculus 50 Cdv3 ENSMUSG00000032803 ENSMUST00000072249,ENSMUST00000035484 3 2 3 80 9 103258660 103258680 CCACCAGAAATATACAGTGAC 58 103257634 103258618 TTCTTTATCCTTCCGGCTC 59 NA Nonspecific Mus musculus 50 Guca2b ENSMUSG00000032978 ENSMUST00000044426,ENSMUST00000106309 1 2 2 164 4 119330246 119330264 GAAGGAGATGTCCAATCCC 59 119329422 119329441 ATACACAGTTCACATTCGTC 57 NA DesignNoJunction Mus musculus 50 Gas7 ENSMUSG00000033066 ENSMUST00000108681,ENSMUST00000041611,ENSMUST00000108682,ENSMUST00000108680 2 4 4 113 11 67416709 67416727 TATGTCAACACGACTACCA 57 67443183 67456793 GTATCCATTCACTGTTGTAGG 58 NA Mus musculus 50 Vps8 ENSMUSG00000033653 ENSMUST00000042520 3 1 4 85 16 21581698 21581716 GCTCAAGTAATAAAGCGGG 58 21581765 21640763 TTCTGAGTTTGCCTGAGAC 59 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111698,ENSMUST00000111690,ENSMUST00000099941,ENSMUST00000111693,ENSMUST00000111692,ENSMUST00000111688,ENSMUST00000111686,ENSMUST00000111691,ENSMUST00000111697,ENSMUST00000067232,ENSMUST00000066177,ENSMUST00000036811 1 12 23 81 2 84443860 84443878 AGACCACAACAGAACACTG 59 84443052 84443815 AATCTTCTGCATCAAGGGT 58 NA Nonspecific Mus musculus 50 Cd300a ENSMUSG00000034652 ENSMUST00000045151 1 1 2 123 11 114754801 114754819 ATGCAGACACCTACATGTG 59 114754906 114755999 GTCTCTAGTGTTGGTCCTG 59 NA Mus musculus 50 Mid1 ENSMUSG00000035299 ENSMUST00000112104,ENSMUST00000112107,ENSMUST00000112108,ENSMUST00000036753,ENSMUST00000112105,ENSMUST00000078947 3 6 7 159 X 166404083 166414865 ATGTTGAAGTCAATGCATCC 58 166419841 166419860 TTACAGTTTGCAATCTGCTG 59 NA Mus musculus 50 Capn5 ENSMUSG00000035547 ENSMUST00000040971,ENSMUST00000107112 2 2 2 99 7 105277937 105279708 GAATTCTGGATGACCTTTGAG 58 105277858 105277876 CCCATGTCTTATGGATGCT 59 NA Mus musculus 50 Fbxw2 ENSMUSG00000035949 ENSMUST00000113080,ENSMUST00000028220,ENSMUST00000091020,ENSMUST00000113075 2 4 8 81 2 34678122 34678143 CTTCGTTAATTGGACATAGTGC 59 34668514 34678080 GACAAGTCATCTGACCCTG 59 NA Mus musculus 50 Fmnl2 ENSMUSG00000036053 ENSMUST00000049483 2 1 3 81 2 52985988 52986008 CGCCATTGAAGACATTATCAC 59 52989484 52990885 GGTTTCTAAGATCCTCGAGTG 59 NA Mus musculus 50 Il5 ENSMUSG00000036117 ENSMUST00000048605 1 1 1 70 11 53537316 53537334 AGAAATACATTGACCGCCA 59 53537447 53537465 GTAATCCAGGAACTGCCTC 59 NA DesignNoJunction Mus musculus 50 9030025P20Rik ENSMUSG00000036552 ENSMUST00000040594,ENSMUST00000097393 1 2 5 200 17 15188596 15190188 CTGCCATGGAATTCTTGTG 59 15193715 15193733 ACTGTATTGCTGCTTCCTC 59 NA Mus musculus 50 Abcc12 ENSMUSG00000036872 ENSMUST00000109667,ENSMUST00000080115 2 2 5 80 8 89031863 89032987 ACAGTAAGGTACAACTTGGAC 59 89031803 89031822 TCTCATGAACGTTCTTTCCA 59 NA Mus musculus 50 Hk1 ENSMUSG00000037012 ENSMUST00000099691 1 1 2 93 10 61755127 61755146 AAAGCCTCTTATTTGAAGGG 57 61753133 61755071 TCCTTATCCGTTTCAATGG 57 NA Mus musculus 50 Tacc3 ENSMUSG00000037313 ENSMUST00000079534,ENSMUST00000074849 1 2 4 80 5 34009382 34009719 TGGAACTTCCTCGTTTAAGG 59 34009762 34009780 GGGCTGTCTTTCAGAAGAG 59 NA Mus musculus 50 Wdhd1 ENSMUSG00000037572 ENSMUST00000111792 2 1 4 178 14 47888340 47888358 ATGTGGAAACCAAAGACTG 57 47886729 47887757 TATAATGCCCTTATTGCTCG 57 NA Mus musculus 50 Herc1 ENSMUSG00000038664 ENSMUST00000042824 1 1 4 80 9 66261932 66261950 AGATTTGTTCTTGCAGCAC 58 66261994 66262101 TTTACCAGGTTGGTATCGG 58 NA Mus musculus 50 Ccdc68 ENSMUSG00000038903 ENSMUST00000043929 2 1 2 97 18 70120075 70120093 AGATTTCCATCCTCCAGGA 59 70120154 70121125 TAGTCCTTCCATCTCCTGG 59 NA Mus musculus 50 Cldnd2 ENSMUSG00000038973 ENSMUST00000040227 1 1 1 75 7 50697641 50697660 GTAGCCAGAATACCATTGTC 58 50698242 50698260 TTTGAAGTGTATACGGCCA 58 NA DesignNoJunction Mus musculus 50 Wdr45 ENSMUSG00000039382 ENSMUST00000115686,ENSMUST00000116633 3 2 8 82 X 7304141 7304160 TCTCTTTGATACCCAATCCA 58 7304205 7304886 TACACAGATGGCAGTACAG 58 NA Mus musculus 50 Grin3a ENSMUSG00000039579 ENSMUST00000076674,ENSMUST00000093859 1 2 2 80 4 49732164 49732184 AGAGATGCATGAGTACATGAG 59 49727103 49732124 TTCTCTGGATCATTCTTCAGG 59 NA Mus musculus 50 D330017J20Rik ENSMUSG00000039629 ENSMUST00000046028,ENSMUST00000115224 1 2 2 80 6 29875088 29876560 CTCTATCTAGCTCAAGGCAC 59 29876602 29876621 CAGGAAGCAATTGTATCTGG 58 NA Mus musculus 50 A730011L01Rik ENSMUSG00000039850 ENSMUST00000106245,ENSMUST00000106244,ENSMUST00000064513 2 3 3 200 11 119362009 119363616 AAGGAGAAGATTGTGCTCC 59 119364117 119364135 TATAGGTTCTGGGATCCGG 59 NA DesignRelaxed Mus musculus 50 Pak7 ENSMUSG00000039913 ENSMUST00000077200,ENSMUST00000035264 3 2 2 80 2 135923258 135923277 ACCTTCATAACCAAGGAGTG 59 135913245 135923216 ATAACTTTATCCGGCCATCG 59 NA Mus musculus 50 Plcb4 ENSMUSG00000039943 ENSMUST00000110109,ENSMUST00000035646,ENSMUST00000110106 1 3 4 80 2 135833122 135833565 GAAAGAAAGAGACTGGCGA 59 135833608 135833627 TAGGAATTCTAGGTGCTCCA 59 NA Mus musculus 50 1110051M20Rik ENSMUSG00000040591 ENSMUST00000064652,ENSMUST00000094835,ENSMUST00000111344,ENSMUST00000102594 1 4 4 80 2 91122805 91124399 TTACTCAGAATTCCTGGAGAG 58 91122745 91122763 GGGACAATCACTGTATTGG 57 NA Mus musculus 50 Erg ENSMUSG00000040732 ENSMUST00000113848,ENSMUST00000077773 3 2 4 106 16 95600721 95600739 TAATGCATGCCAGAAACAC 58 95591657 95598914 CTCATAAGGTAAATCTGGCCT 59 NA Mus musculus 50 Npnt ENSMUSG00000040998 ENSMUST00000042729,ENSMUST00000042744 3 2 3 103 3 132572969 132580433 GCAACCAAGATTTAAACGAG 57 132572885 132572903 CATGTATCCGTTGAGACAG 57 NA Mus musculus 50 3110001K24Rik ENSMUSG00000041471 ENSMUST00000111917,ENSMUST00000035262 3 2 2 85 14 35052133 35054485 AAATATTCTATAGGCCGGCT 58 35052067 35052085 CTGCTCCATCATCTTTGAC 58 NA Mus musculus 50 Sp9 ENSMUSG00000041762 ENSMUST00000112043,ENSMUST00000076463,ENSMUST00000112042,ENSMUST00000048504 1 4 6 85 2 73206426 73206447 CCCTGTCTATTCTTCTCTTGAG 59 73205647 73206382 AACAATAGTCTGAGCGATGAG 59 NA Mus musculus 50 Sp9 ENSMUSG00000041777 ENSMUST00000058615,ENSMUST00000102686 2 2 2 60 2 73124420 73124438 TTCTTAAAGTCGCTCACCA 58 73123076 73124399 CAAGTCTATCCAATTTCCTGAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Osbpl6 ENSMUSG00000042359 ENSMUST00000077972 3 1 5 81 2 76406289 76407084 CACTGTCACAGAGTGAAGG 59 76415097 76415115 TGTATTCTGTTCAGCCGAC 59 NA Mus musculus 50 Esm1 ENSMUSG00000042379 ENSMUST00000038144 1 1 1 110 13 114003655 114003673 TTCTTCCAGTATGCAGCAG 59 114006884 114006903 CCCTTCTCCAATCTCTTCTC 59 NA DesignNoJunction Mus musculus 50 Agps ENSMUSG00000042410 ENSMUST00000047232,ENSMUST00000111951 1 2 3 93 2 75742928 75742949 GTGTAGAAATGTAAAGGAGAGG 58 75743003 75747673 ATAAGTCTGTGTCACCCTG 58 NA Mus musculus 50 Gucy2c ENSMUSG00000042638 ENSMUST00000032338 1 1 2 83 6 136676425 136676865 TAGACCTGAACAAGTTGCTG 59 136676361 136676379 CAAAGATCCTGGTGTCCAG 59 NA Mus musculus 50 Uqcrq ENSMUSG00000044894 ENSMUST00000061326 2 1 3 87 11 53244204 53244222 GTCTATCTTCTGTCCCAGG 58 53244135 53244153 CAAGCTGTAGGAGATCACG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Suv420h1 ENSMUSG00000045098 ENSMUST00000113973,ENSMUST00000113972,ENSMUST00000113968,ENSMUST00000052699,ENSMUST00000113970,ENSMUST00000113967 3 6 9 128 19 3793168 3793188 GGTTCTTGATCCCTACTTAGG 59 3796702 3802086 ATAGGCCGAAATCTCACAG 59 NA Mus musculus 50 Dmd ENSMUSG00000045103 ENSMUST00000114000,ENSMUST00000057711,ENSMUST00000113991 2 3 5 83 X 82389497 82390260 ATGGAAACTCCCGTTACTC 58 82394486 82394505 AGTATCATCGTGTGAAAGCT 59 NA Mus musculus 50 BC107364 ENSMUSG00000046317 ENSMUST00000093126,ENSMUST00000098841,ENSMUST00000059728 2 3 3 83 3 96244776 96245974 TACTCGCCTGTCTAAACAG 58 96244711 96244729 TCTTTGTTTGGGTCAAGGA 58 NA Mus musculus 50 Dmbt1 ENSMUSG00000047517 ENSMUST00000006366 3 1 2 80 7 138193704 138193722 TCATAACTGTGGACACCAG 58 138196726 138199670 TAGAACACATCAGGTGTGG 58 NA Mus musculus 50 BC051628 ENSMUSG00000047841 ENSMUST00000050026,ENSMUST00000108835 2 2 2 60 2 180956825 180956843 ACCAGAGCAGTATGAACTG 58 180956867 180956885 TGTACACTCCTGTTGTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG432534 ENSMUSG00000047886 ENSMUST00000053570 1 1 1 60 11 11364501 11364519 GCCGGACTATCATCTTCAC 59 11364543 11364561 TGCTAATGGATATGCCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Npm2 ENSMUSG00000047911 ENSMUST00000062629 3 1 1 83 14 71048207 71049285 ATGTTATGAGACTTCGGACC 59 71048143 71048161 GCATCCTCATCTTCATCCT 58 NA Mus musculus 50 Neurod4 ENSMUSG00000048015 ENSMUST00000061571 1 1 1 60 10 129707659 129707678 ACTTCTCCTTAAAGCAAGAC 57 129707618 129707636 TGTGGCATGAAATTGTAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Slitrk3 ENSMUSG00000048304 ENSMUST00000059407 1 1 1 60 3 72854450 72854469 CCACTTATCTTCAAGCAAGG 58 72854409 72854429 AGAAGACAACATAGAGGAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 D430039N05Rik ENSMUSG00000048388 ENSMUST00000051454 1 1 1 84 2 83716870 83716889 ACAGTCATTTGATTTGGACC 58 83716936 83718322 ATGCCGAAATCTAGAGTGG 59 NA Mus musculus 50 NP_001013772.1 ENSMUSG00000048411 ENSMUST00000059937 2 1 1 60 1 28834437 28834456 AAGACTCAAATGAAGCTGGA 59 28834396 28834416 GCAATATTCTGTGTTTCTCGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cypt3 ENSMUSG00000048573 ENSMUST00000056754,ENSMUST00000112573 1 2 2 63 X 149993266 149993285 GCTTAATAAGAAGCGAAACC 57 149993310 149993329 ACGAATTAAGGAACGATGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 A730037C10Rik ENSMUSG00000048655 ENSMUST00000052904,ENSMUST00000061099 2 2 2 88 3 54961046 54962477 AGTCAAAGGCATACCACAG 59 54967249 54967269 CTTGGATACTTGATTTGAGCC 59 NA Mus musculus 50 Mex3d ENSMUSG00000048696 ENSMUST00000105350,ENSMUST00000099480,ENSMUST00000062946 2 3 3 77 10 79844946 79844964 AGATTGAGGCTCACATCAC 59 79844887 79844905 TACCATTGGCATGGAAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lrp1b ENSMUSG00000049252 ENSMUST00000052550,ENSMUST00000100131 3 2 2 82 2 40457110 40466964 CATATCAGCACAAGGAGCA 59 40457046 40457067 ACTAAACCAATCACTAGAGTGG 59 NA Mus musculus 50 Zfp668 ENSMUSG00000049728 ENSMUST00000106263,ENSMUST00000106262,ENSMUST00000106261,ENSMUST00000054415 1 4 4 188 7 135011282 135011300 CTGAGCTCAAGGACTTACG 59 135010720 135010738 TTTGGTAAGAGCTGAGCTG 59 NA DesignNoJunction Mus musculus 50 Glp2r ENSMUSG00000049928 ENSMUST00000021289,ENSMUST00000108679 3 2 3 93 11 67555846 67560216 TTCCTTCGATTTCTGCCTC 59 67555771 67555789 TAAAGTCCTTCAACCAGCA 58 NA Mus musculus 50 5133401N09Rik ENSMUSG00000050002 ENSMUST00000051490 1 1 2 60 13 58261558 58261576 AATCGGATAAAGATGGCGA 58 58264199 58264217 AAAGCCATGGAATCCTGTC 59 NA DesignNoJunction Mus musculus 50 Slc25a44 ENSMUSG00000050144 ENSMUST00000057935,ENSMUST00000107536 2 2 2 70 3 88224423 88224442 CTTCTACCACTTCTATGCAG 57 88219987 88220006 CTTGAAAGACAATGTGAGGG 58 NA DesignNoJunction Mus musculus 50 Rab11fip5 ENSMUSG00000051343 ENSMUST00000089579,ENSMUST00000060837 2 2 2 68 6 85287214 85287486 AAGAGGCCAAAGGATTCTG 59 85287164 85287182 GAGCTCATCATGAGTCAGG 59 NA DesignRelaxed Mus musculus 50 Zfp217 ENSMUSG00000052056 ENSMUST00000109155,ENSMUST00000063710 1 2 2 79 2 169941642 169941660 CATCTCAGAACGCATACAG 57 169941012 169941030 CTCAGAGATGTCTTCTGGG 58 NA DesignNoJunction Mus musculus 50 Zfp217 ENSMUSG00000052056 ENSMUST00000109155,ENSMUST00000063710 2 2 2 80 2 169941642 169941661 TCATCTCAGAACGCATACAG 59 169941012 169941030 CTCAGAGATGTCTTCTGGG 58 NA DesignNoJunction Mus musculus 50 Acot4 ENSMUSG00000052392 ENSMUST00000021652 1 1 1 80 12 85382968 85382986 GTACATGCTTCGACATCCA 59 85384181 85384199 ATCAGACAGACATCAGCTC 58 NA DesignNoJunction Mus musculus 50 Rexo4 ENSMUSG00000052406 ENSMUST00000064244,ENSMUST00000114020 1 2 3 81 2 26811863 26811881 TTTGTTCCTTGACCATCCA 59 26811081 26811818 TCGTCCACTCTTTACTCGA 59 NA Mus musculus 50 5430435G22Rik ENSMUSG00000052688 ENSMUST00000064679 2 1 2 91 1 133595197 133602179 GAAGATAGGAAGGTGTCCC 58 133602234 133602252 TTGATGTCATTCTTCGCAC 58 NA Mus musculus 50 Tln2 ENSMUSG00000052698 ENSMUST00000040025,ENSMUST00000039662,ENSMUST00000085405,ENSMUST00000034771 2 4 5 80 9 67120468 67120486 AATGACCACTGACTATGGG 58 67114720 67120424 TGGAATCCAATCTCCTCTG 58 NA Mus musculus 50 AI854703 ENSMUSG00000053297 ENSMUST00000095938 3 1 2 134 6 48580306 48581549 TGCTTATCTATACGAAGCCA 58 48581646 48581664 AGGTAGGACTTCTGAGGAG 59 NA InUTR Mus musculus 50 Eif3k ENSMUSG00000053565 ENSMUST00000066070 3 1 3 83 7 29765515 29765533 GAGCGATATGTGGAGACAC 59 29762997 29765470 GTTGAACTGGTACAGTTTCAG 59 NA Mus musculus 50 Grwd1 ENSMUSG00000053801 ENSMUST00000066438,ENSMUST00000107723,ENSMUST00000098449 3 3 4 84 7 53085503 53085670 GAGCAATAGACTGATGATGCT 59 53085439 53085457 TTCCTCATCGTCATCACTG 59 NA Mus musculus 50 Camk2d ENSMUSG00000053819 ENSMUST00000066466,ENSMUST00000066452 2 2 9 101 3 126504672 126513568 GGGTAAAGGAGTCAACTGAG 59 126537517 126537536 CTTCAATCAGTTGCTCAGTG 59 NA Mus musculus 50 OTTMUSG00000019350 ENSMUSG00000055109 ENSMUST00000112542,ENSMUST00000068500 2 2 2 161 X 152735575 152735593 CTGAGTTTCCTGGTAGCAG 59 152737829 152777616 ACACAAAGAAACCTCAGGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Arntl ENSMUSG00000055116 ENSMUST00000047321 2 1 3 116 7 120424210 120424228 ATCAGCGACTTCATGTCTC 59 120424305 120426780 CATACTTTCTTGGTAGTCAGTG 58 NA Mus musculus 50 Stam2 ENSMUSG00000055371 ENSMUST00000102759 1 1 4 96 2 52559108 52559126 TAGGACCTGATCCTATGGG 59 52550448 52559049 TGTCCAGTGCTTAAGTATGG 59 NA Nonspecific Mus musculus 50 Lair1 ENSMUSG00000055541 ENSMUST00000086401,ENSMUST00000108600,ENSMUST00000068865,ENSMUST00000108599,ENSMUST00000108598 3 5 6 91 7 3961893 3962077 ATGACTCCAGACATAGTTGC 59 3961405 3961423 GTCACCTCTTGAAGGTCTC 59 NA Mus musculus 50 BC042720 ENSMUSG00000055567 ENSMUST00000087318 1 1 5 119 1 66729754 66729772 TGAACAGGAAGCTTGTCTC 59 66729855 66739093 ATACTTGCCACCCTTTGAC 59 NA Mus musculus 50 9330182L06Rik ENSMUSG00000056004 ENSMUST00000115343,ENSMUST00000069538 2 2 3 80 5 9418061 9420624 GCTCCCATTCTGTAATGCT 59 9420667 9420686 CTGCCTTAGAACCCATAAGG 59 NA Mus musculus 50 1700008F21Rik ENSMUSG00000056018 ENSMUST00000108745,ENSMUST00000026912,ENSMUST00000108744 1 3 3 114 8 131660534 131662298 CAGCTATGTTACACAAAGCT 58 131669468 131669486 ATTTCACCTTCTAGCAGGT 58 NA Mus musculus 50 Grik2 ENSMUSG00000056073 ENSMUST00000105487,ENSMUST00000105485,ENSMUST00000078692,ENSMUST00000079751 3 4 6 80 10 49124249 49139484 GTCTGGAGAAGATTGGGAC 59 49124187 49124206 TAATATTTGCTGGCTTCCCT 59 NA Nonspecific Mus musculus 50 Bcl2 ENSMUSG00000057329 ENSMUST00000080103 2 1 2 79 1 108608920 108608939 GATGACTGAGTACCTGAACC 59 108439954 108439973 CATATAGTTCCACAAAGGCA 57 NA DesignNoJunction Mus musculus 50 Spna2 ENSMUSG00000057738 ENSMUST00000113719,ENSMUST00000113717,ENSMUST00000046257 1 3 6 83 2 29855575 29857763 GACAACCAATATCAGTCTCTG 58 29857807 29857826 GAACAACATGAACTTCTTGC 57 NA Mus musculus 50 Col13a1 ENSMUSG00000058806 ENSMUST00000092484,ENSMUST00000105454 3 2 4 110 10 61424044 61424062 GTCTCCAGGATGTAACTGC 59 61368015 61371434 TGACCTTTGATACCCACAC 59 NA Nonspecific Mus musculus 50 1500016O10Rik ENSMUSG00000058966 ENSMUST00000098032,ENSMUST00000079423 1 2 2 83 7 133968596 133970985 TCATAGATGACCAGCACTG 58 133971032 133971050 GGAACATGGCATAGATGTC 57 NA Mus musculus 50 A630033E08Rik ENSMUSG00000059142 ENSMUST00000088696 1 1 2 181 17 22998813 23002225 TAAAGAATCCAGGTACCCA 57 22998480 22998498 GCATTTACCAAAGAAGCTG 57 NA InUTR Mus musculus 50 Ube4a ENSMUSG00000059890 ENSMUST00000040013 3 1 2 82 9 44743576 44745944 GGAGAGCATTAAGTATTTGAGC 59 44743515 44743533 CTTCTGGTGTCAGACTCTC 59 NA Mus musculus 50 4931433A01Rik ENSMUSG00000061298 ENSMUST00000097920 2 1 6 99 4 111329019 111329772 AAGACTTCGATCCAAGGAG 58 111329835 111329853 AGAACACATGGGAATTCCC 59 NA Mus musculus 50 Slc31a2 ENSMUSG00000066152 ENSMUST00000107468,ENSMUST00000107469,ENSMUST00000084530,ENSMUST00000107467 1 4 4 67 4 61957086 61957104 CTTCAGACAATAGGACCCG 59 61958033 61958051 AATGACATGGACTAGGGAC 58 NA DesignNoJunction Mus musculus 50 Ccl27 ENSMUSG00000066202 ENSMUST00000107987 1 1 3 61 4 42667811 42667829 ACAAGACTAAGCAGAAGCA 58 42669050 42669068 CTGAGTACAGCAGCTAGTG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Xlr4b ENSMUSG00000067768 ENSMUST00000069077,ENSMUST00000069103,ENSMUST00000081827 1 3 4 80 X 70465403 70467216 CACTTGAAGAATCTACAGGC 58 70467256 70467277 CAAGTAGTCCATTAGCTTTCTG 58 NA Nonspecific Mus musculus 50 Macrod2 ENSMUSG00000068205 ENSMUST00000110067,ENSMUST00000110064,ENSMUST00000110063,ENSMUST00000078027 1 4 10 63 2 140226686 140226704 AGAGATGAAGAGCAAAGGC 59 140278331 140278349 TTTCTTCATCTGTGGTGCT 59 NA DesignNoJunction Mus musculus 50 Zbtb34 ENSMUSG00000068966 ENSMUST00000113158,ENSMUST00000091037 3 2 2 60 2 33267764 33267784 GATCTCTGTGATTAAGAACCC 57 33267724 33267742 TCCAGTGTAACAGAAGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000071964 ENSMUSG00000069053 ENSMUST00000091208,ENSMUST00000115894 2 2 2 60 Y 157330 157348 TGGTCTCCTACCTATTCTG 57 157372 157504 TTGACATTTCGTTGGTTGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Trpc2 ENSMUSG00000070425 ENSMUST00000106950,ENSMUST00000106949,ENSMUST00000094129,ENSMUST00000094130,ENSMUST00000084843,ENSMUST00000106951 3 6 8 116 7 109226432 109227256 GCTTAACCAGAACTCTACAG 57 109227521 109227539 TCTGAAATTTCCTTGGTGC 58 NA Mus musculus 50 OTTMUSG00000011097 ENSMUSG00000070605 ENSMUST00000105733,ENSMUST00000105734,ENSMUST00000078693 3 3 3 96 4 145733630 145734489 AAATACACCACAGGGTCTG 59 145733552 145733570 GTACAATGTCCTCTGAGCA 58 NA Nonspecific Mus musculus 50 4833413O15Rik ENSMUSG00000071019 ENSMUST00000095151,ENSMUST00000108383 1 2 2 80 4 3990458 3997042 TCACTTCTGGACTTGTAAGG 58 3990397 3990417 GCTATGCTTGAAATACAGACC 59 NA Mus musculus 50 Zadh1 ENSMUSG00000072946 ENSMUST00000101216,ENSMUST00000110290 1 2 2 83 12 85636211 85636229 TTCAGTTTACCGGATGCTC 59 85636276 85638969 CTTACAGCGCATGTAAGGA 59 NA Mus musculus 50 Etohi1 ENSMUSG00000074521 ENSMUST00000108936 2 1 3 83 2 177640598 177640866 TGCATATCAGAGTGACCTC 58 177640913 177640931 AAGGCTTTACCACATTGGT 59 NA Mus musculus 50 EG633640 ENSMUSG00000074634 ENSMUST00000109199,ENSMUST00000099147 1 2 2 78 13 120281801 120281822 AGCTAGATCCCTATCTTTACAG 58 120283980 120283998 GATGGGTATCACAGTGGAG 59 NA DesignNoJunction Mus musculus 50 Sirpb1 ENSMUSG00000074677 ENSMUST00000108352 2 1 4 60 3 15732178 15732197 AGTCATTGAAACCCATACTG 57 15702593 15732156 CGTCTTCAGTTCTTTCACTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Chst14 ENSMUSG00000074916 ENSMUST00000110837,ENSMUST00000099546 3 2 2 64 2 118753402 118753420 CACTTGTGCAATGTTCCAC 59 118753444 118753466 GAGAAGTCCAGGATATACTTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRBV12-2 ENSMUSG00000076468 ENSMUST00000103269 1 1 1 60 6 41069241 41069260 AGAGATAAAGGAAACCTGCC 59 41069280 41069301 CAGAGTGATAGTCATCAAACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S53 ENSMUSG00000076737 ENSMUST00000103546 1 1 1 60 12 117107207 117107226 GTGAAGATATCCTGCAAGGT 59 117107166 117107187 TCATCCAGTGAATAGTATGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 0610010B08Rik ENSMUSG00000078883 ENSMUST00000109000 2 1 3 70 2 176180745 176182441 CTTTAGAACATGCAGTGGC 59 176180693 176180714 GCCAATATTCATAGGGTTTCTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000068790 ENSMUSG00000079369 ENSMUST00000112738,ENSMUST00000112737 2 2 3 72 14 6733649 6733668 GGAAGAGGGAATCCTTTCTC 59 6732864 6733614 ATTTCTAGCAGACCTGTGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Arpc4 ENSMUSG00000079426 ENSMUST00000102708,ENSMUST00000032412 1 2 2 84 6 113334099 113334117 ATGCCATAAATTCATGCGC 59 113334164 113335495 GATGTCATATCCCTCCACAG 59 NA Mus musculus 50 Pglyrp2 ENSMUSG00000079563 ENSMUST00000114456,ENSMUST00000114455,ENSMUST00000114454 2 3 3 174 17 32560948 32560967 ACCAAGAATTACAACTGCTG 58 32555898 32555916 GGATGATGGAGTCCATGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 mmu-mir-181c ENSMUSG00000065483 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-208b ENSMUSG00000077928 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 A2A4T3_MOUSE ENSMUSG00000078266 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Oxa1l ENSMUSG00000000959 ENSMUST00000000985 3 1 1 118 14 54986777 54986950 ATCCTACCTCTCACTCAGG 59 54987032 54987050 GTGAGATCTTGGAACCACC 59 NA DesignNoJunction Mus musculus 50 Gramd1a ENSMUSG00000001248 ENSMUST00000001280,ENSMUST00000085636 2 2 2 80 7 31928575 31928683 ACAGTAAGAAGATGCAGAGC 59 31927856 31927874 TGAACAGTTTCCGGAAGTC 59 NA Mus musculus 50 Sp1 ENSMUSG00000001280 ENSMUST00000001326 1 1 1 80 15 102260571 102261160 TAAACGTACACATACAGGAGAG 59 102261201 102261219 TTTGACAGGTGATCACTCC 59 NA Mus musculus 50 Ugp2 ENSMUSG00000001891 ENSMUST00000060895,ENSMUST00000102875,ENSMUST00000109575 3 3 3 82 11 21233806 21253363 CCAGAAGATTCGATTCAACC 58 21233743 21233761 ACCAACTTGTTCAACACAG 58 NA Mus musculus 50 Tmem25 ENSMUSG00000002032 ENSMUST00000114705,ENSMUST00000002100,ENSMUST00000085951 2 3 3 89 9 44606262 44606280 ACATGAGCTTAACTGCTCC 59 44604685 44606210 ATCTCTGGTTTGAATTGCAC 58 NA Mus musculus 50 Supt6h ENSMUSG00000002052 ENSMUST00000108314,ENSMUST00000002121 3 2 2 80 11 78042508 78042527 TACCGAAAGGAGTATGTGGA 59 78042265 78042465 CTGAGTCCACTTCTCATCC 59 NA Mus musculus 50 Slc9a3r2 ENSMUSG00000002504 ENSMUST00000002572,ENSMUST00000019684 3 2 3 119 17 24778693 24778777 GGAACATGTAGAAGGTCCA 58 24777541 24777559 TCATTGTCCTTCTCTGAGC 58 NA Mus musculus 50 Edar ENSMUSG00000003227 ENSMUST00000003312 2 1 1 80 10 58092165 58092183 ATACCACAACCAGACTACC 58 58091379 58092121 TATCCACAGGACATGTAGG 57 NA Mus musculus 50 Glg1 ENSMUSG00000003316 ENSMUST00000003404 1 1 1 80 8 113724083 113724101 AACCTGACTACTGATCCCA 59 113721694 113724040 CGCACATTCTTTAATCTCGG 59 NA Mus musculus 50 Cp ENSMUSG00000003617 ENSMUST00000108329,ENSMUST00000091309,ENSMUST00000108327,ENSMUST00000003714,ENSMUST00000108328,ENSMUST00000108325 1 6 6 80 3 19883458 19883477 CCATATTCAATACATGCCCA 57 19883519 19885576 ATAAGTTCGAACTTCACCTG 57 NA Mus musculus 50 Kifc2 ENSMUSG00000004187 ENSMUST00000004294 1 1 1 81 15 76492036 76492162 TCCACTCTAGATGGGTCTC 59 76492207 76492225 TCTCATCCCTTGGTACCTC 59 NA Mus musculus 50 Senp3 ENSMUSG00000005204 ENSMUST00000005336,ENSMUST00000094071,ENSMUST00000066760 1 3 3 85 11 69488024 69488042 TCAGTTGATGTAAGGCGAC 59 69487774 69487977 TACTTGGCAATATGCTTAGGG 59 NA Mus musculus 50 Med8 ENSMUSG00000006392 ENSMUST00000084319,ENSMUST00000073881,ENSMUST00000019229,ENSMUST00000106384 3 4 4 99 4 118084321 118084341 GTCTTAAAGCATGAGAAGACG 59 118084402 118084969 CTTCAGTTTGACGCATGAG 59 NA Mus musculus 50 Rbm14 ENSMUSG00000006456 ENSMUST00000099998 2 1 3 94 19 4811222 4811240 GTACAAGTCAGGAATTGCG 58 4803990 4804009 CTTCTCCATGTGAACAAACG 59 NA DesignNoJunction Mus musculus 50 Mid1ip1 ENSMUSG00000008035 ENSMUST00000115524,ENSMUST00000008179 2 2 2 61 X 10295362 10295383 CAAATCTGCGACACATATAACC 59 10295405 10295423 CCAATGAAGCGATTCATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tle1 ENSMUSG00000008305 ENSMUST00000072695,ENSMUST00000102848,ENSMUST00000107347,ENSMUST00000107350,ENSMUST00000107349,ENSMUST00000098010,ENSMUST00000074216,ENSMUST00000107355,ENSMUST00000030095 3 9 10 83 4 71806398 71806416 AGATAAGCGCAGAAATGGT 59 71802904 71806354 CCATCACTGTCATAGTTATCCT 59 NA Mus musculus 50 Carhsp1 ENSMUSG00000008393 ENSMUST00000008537 3 1 1 81 16 8661187 8663688 CATCTCTGATGTGGAAGGG 59 8661124 8661142 GTTCTTGGGTGGGATAGAG 59 NA DesignRelaxed Mus musculus 50 Rps25 ENSMUSG00000009927 ENSMUST00000080300 3 1 1 60 9 44216936 44218039 GGAGCTCCTTAGTAAAGGAC 59 44218060 44218080 GTAAATTACTTGGGCTCTGTG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Plcd1 ENSMUSG00000010660 ENSMUST00000010804 1 1 1 80 9 118981419 118981437 GTGATAGTGGAGATCCACG 59 118981280 118981376 TGGGTTGAAACCATTATTGG 58 NA Mus musculus 50 Rpl15 ENSMUSG00000012405 ENSMUST00000079419,ENSMUST00000100799,ENSMUST00000080281 2 3 4 152 14 19102918 19102936 TATGGAGGAAGAAGCAGTC 58 19102549 19102802 TGACATAGCCTTGCTTAGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ttll5 ENSMUSG00000012609 ENSMUST00000110219,ENSMUST00000040179 2 2 6 130 12 87361544 87365178 AACTCCACAGGATCTTTGG 59 87365270 87365290 TAAATTGTCCCTGACTTCACC 59 NA Mus musculus 50 Lphn1 ENSMUSG00000013033 ENSMUST00000093386,ENSMUST00000045393,ENSMUST00000116450 2 3 3 81 8 86456295 86456410 AAGGACTACATCAAGGCTG 58 86456452 86456473 CATTCATGTCTTTCCATGACTC 59 NA Mus musculus 50 Amotl1 ENSMUSG00000013076 ENSMUST00000013220 2 1 1 81 9 14354890 14354908 CAGACTTCTCTTACCAGCA 58 14353242 14354845 GCAGGAATCCTATACTCCC 58 NA Mus musculus 50 B4galnt2 ENSMUSG00000013418 ENSMUST00000038343,ENSMUST00000103158 2 2 2 80 11 95737459 95737478 CTGAATTTCATCCTTCAGCA 58 95735249 95737419 GTATTCCATACTTACTGTGTCC 57 NA Mus musculus 50 Aldh1a2 ENSMUSG00000013584 ENSMUST00000034723 2 1 1 82 9 71132756 71132774 GAAGGGCTTCTTCATTGAG 58 71132820 71132935 CAGGACCAAAGATCTCCTC 59 NA Mus musculus 50 Fbxw5 ENSMUSG00000015095 ENSMUST00000015239,ENSMUST00000100316 1 2 2 106 2 25359839 25359949 TGATAACAGGTACCTGTATGTG 59 25360016 25360034 ACACCAGCAAGTCAATCTC 59 NA Mus musculus 50 Pcolce2 ENSMUSG00000015354 ENSMUST00000015498 2 1 1 80 9 95587249 95593288 CGTAACTACAGGTCTAAAGC 57 95593331 95593349 CAGTAATTGCTCTCCAGAG 57 NA Mus musculus 50 Adss ENSMUSG00000015961 ENSMUST00000016105 2 1 1 84 1 179715079 179715100 CGTAGATTCTGTGGAATATGAC 58 179714238 179715035 CACTCCATTTCCGATAAAGG 58 NA Mus musculus 50 Hspb9 ENSMUSG00000017832 ENSMUST00000017976 3 1 1 152 11 100575428 100575446 CAAATAAAGGTGGATGCCC 58 100575562 100575580 CATTTGTCGGTGAACACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Glra2 ENSMUSG00000018589 ENSMUST00000058787 1 1 1 80 X 161621557 161621575 CAGTGAACTTTGTCTCCAG 57 161568485 161621515 CATCTTCTTCCTTATTCTGCC 58 NA Mus musculus 50 Mtap1s ENSMUSG00000019261 ENSMUST00000019405 3 1 1 251 8 73434931 73435745 TCTCCAGCATTGTGAAAGG 59 73436544 73436814 CATCCTGGACCTCTTTGTC 59 NA DesignRelaxed Mus musculus 50 Psmc3ip ENSMUSG00000019303 ENSMUST00000019447 3 1 1 87 11 100954234 100954252 GTGTGCTCAATACACAGAG 58 100954080 100954183 GTCTCTGTACACCTTCTCC 58 NA Mus musculus 50 Ubxd1 ENSMUSG00000019578 ENSMUST00000019722 3 1 1 132 17 56210141 56210319 TATCGCCAAATACCTGGAC 59 56209151 56209169 AATGGCTTCAAAGAACTCG 58 NA Mus musculus 50 Krt10 ENSMUSG00000019761 ENSMUST00000103131,ENSMUST00000006961 2 2 2 80 11 99248431 99248555 TTCAATCAGAAGAGCAAGG 57 99248369 99248388 AGTGATTTCAGACTTATGGC 57 NA Mus musculus 50 Pex3 ENSMUSG00000019809 ENSMUST00000019945 3 1 1 80 10 13247637 13251076 ACTCCATAAACAGTCTGTCC 59 13247576 13247594 AAACTGAATGGATCTGCCC 59 NA Nonspecific Mus musculus 50 Hsf2 ENSMUSG00000019878 ENSMUST00000081139,ENSMUST00000079833 3 2 2 81 10 57219228 57219246 TGAATCCCTTTGGAAGGAG 58 57219291 57221187 AAACTGGACAATCTTCCGA 58 NA Mus musculus 50 Cpeb4 ENSMUSG00000020300 ENSMUST00000020543,ENSMUST00000109413,ENSMUST00000109412,ENSMUST00000093220 3 4 4 101 11 31825375 31825393 GAAAGTTCTGTTCAGGCTC 58 31825458 31827649 GATCTGCACTGGTTTATCC 57 NA Mus musculus 50 Hspa4 ENSMUSG00000020361 ENSMUST00000020630 3 1 1 80 11 53084497 53084516 AGGAACCTTTCACTCTTGAG 59 53083360 53084455 CTGAGAACTGAGCTATAGCA 58 NA Mus musculus 50 Sel1l ENSMUSG00000020964 ENSMUST00000021347 2 1 1 80 12 93070055 93070073 GAGATGATCTATCAGGCCG 59 93069274 93070012 AAGGTACCGATATGCTTCTC 58 NA Mus musculus 50 Mta1 ENSMUSG00000021144 ENSMUST00000109727,ENSMUST00000109726,ENSMUST00000009099,ENSMUST00000109723,ENSMUST00000069690 1 5 5 96 12 114369664 114369787 AACCGCAATAACATGAGTC 58 114369847 114369865 TAGTATGCAGGTAGAAGGC 58 NA Nonspecific Mus musculus 50 4930573I19Rik ENSMUSG00000021275 ENSMUST00000021703 2 1 1 80 12 112186079 112186098 ATCAGGACACTTTCCAAGAG 59 112186141 112192897 CAGTCTCACAGTTCCTAGC 59 NA Mus musculus 50 Scgn ENSMUSG00000021337 ENSMUST00000021770 2 1 1 80 13 24058711 24058729 GGATCTTAATGACTTGGCA 57 24054039 24054655 TCAGTAGAAGAAGCATCCA 57 NA Mus musculus 50 Gcnt2 ENSMUSG00000021360 ENSMUST00000110191 2 1 3 134 13 40956629 41048949 CAATAGGATCCCTGGAGTC 58 41053527 41053545 ATACAAATGCCATGGACGT 59 NA DesignNoJunction Mus musculus 50 Aggf1 ENSMUSG00000021681 ENSMUST00000022189 1 1 1 80 13 96134686 96134705 AGTGAGAAGAGCTATGATGG 58 96132893 96134644 TCTTTCCTCATCTTCATCGT 58 NA Mus musculus 50 Phf7 ENSMUSG00000021902 ENSMUST00000022459,ENSMUST00000112051 2 2 2 81 14 32055002 32061238 TTTCTGTCTTATCCTGTCTAGC 59 32054942 32054962 GATGTCTTCAGGCATAAATCC 58 NA Mus musculus 50 1700049K14Rik ENSMUSG00000021966 ENSMUST00000111173,ENSMUST00000022537 3 2 2 60 14 64728467 64728486 TATTCTCAATGAGTGGTGGG 59 64728508 64729472 AGAGTTGTTTAGTTGGTCGA 58 NA DesignNoJunction Mus musculus 50 Nkx3-1 ENSMUSG00000022061 ENSMUST00000022646 1 1 1 60 14 69810068 69810086 CAAGAACCTCAAACTCACC 58 69810110 69810128 CTTATAGCGTCTGTTCTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 BC036313 ENSMUSG00000022211 ENSMUST00000076236,ENSMUST00000111408 1 2 2 80 14 56116574 56116694 CTGATAATGGGTTTGACTCAG 58 56116735 56116754 CTAGGAATAGGTGCTTGAGG 59 NA Mus musculus 50 Dnahc5 ENSMUSG00000022262 ENSMUST00000067048 2 1 1 80 15 28326998 28331548 CAGAACCTACAGCAGTTCC 59 28331590 28331610 GTCGGACATTTCAAAGTAAGG 59 NA Mus musculus 50 Matn2 ENSMUSG00000022324 ENSMUST00000022947 1 1 1 80 15 34362440 34362458 GAAGACTCTGGTGGAAGAC 59 34362500 34362858 GAATCTATGTTGCACTGTTGG 59 NA Mus musculus 50 5730410E15Rik ENSMUSG00000022340 ENSMUST00000059651 2 1 4 80 15 44596149 44619143 AAGGAAACGATGGATCTGG 59 44596087 44596105 CCAAATAAGCGACCATGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ribc2 ENSMUSG00000022431 ENSMUST00000023067 1 1 1 80 15 84968485 84971922 ACAAGAATCAGGTTGTGGA 58 84971966 84971984 TGATCTCGGTCATGTTGTC 59 NA Mus musculus 50 Ly6e ENSMUSG00000022587 ENSMUST00000023251,ENSMUST00000051698 3 2 2 101 15 74788298 74788707 ATGGAGCAAGTTCATTCCC 59 74788770 74788790 ACAGTAATGGTCTTTCTCCTG 59 NA Mus musculus 50 Senp5 ENSMUSG00000022772 ENSMUST00000023457 1 1 1 112 16 31983614 31983632 CTGGATATGGACGATCTGG 58 31977833 31983357 AAGAAGTGGACCTTGTCTG 59 NA Mus musculus 50 Popdc2 ENSMUSG00000022803 ENSMUST00000023494,ENSMUST00000114739 2 2 2 63 16 38369648 38369666 ACTGCATCCTTCTGAAGAG 58 38373919 38373937 GTAGCTACATTCGGTCTCC 59 NA DesignNoJunction Mus musculus 50 App ENSMUSG00000022892 ENSMUST00000074271,ENSMUST00000114177,ENSMUST00000005406 3 3 3 84 16 84965965 84965983 ATCTCGGAAGTGAAGATGG 58 84963098 84965917 CTTCAGCAAAGAACACCAG 58 NA Mus musculus 50 ORF9 ENSMUSG00000022938 ENSMUST00000049721 2 1 1 80 16 97697420 97697995 ATGAAGGTGATAACTCCGG 58 97697358 97697376 CATGAGTCACCATGAACAG 58 NA Mus musculus 50 Ceacam14 ENSMUSG00000023185 ENSMUST00000023953 1 1 1 129 7 18399746 18400463 ATTCTTTGTACACAGCCCA 59 18400556 18400574 CTTTGGCATCTGAAAGACC 58 NA Mus musculus 50 Lcn9 ENSMUSG00000023210 ENSMUST00000023978 2 1 1 95 2 25679561 25679958 TTCTCTGTTGCCTATGAGG 58 25680017 25680035 CCCATTCTTGATGTTCTGC 58 NA Mus musculus 50 Telo2 ENSMUSG00000024170 ENSMUST00000115181,ENSMUST00000115180,ENSMUST00000024987 3 3 3 81 17 25241803 25241821 TGTGTAGCAGAGTTTGAGC 59 25241611 25241758 GATACTTGGCTACCTGCTC 59 NA Mus musculus 50 Syt4 ENSMUSG00000024261 ENSMUST00000025110 2 1 1 83 18 31600135 31601255 GACTTTCAGATCCCTACGT 58 31600070 31600089 TGCATTTCTTAACGTGAGTC 58 NA Mus musculus 50 5730494M16Rik ENSMUSG00000024269 ENSMUST00000115817,ENSMUST00000025118 1 2 2 82 18 25307731 25309708 GCTAGATGAGCACATTATTCC 58 25307669 25307687 ACACAGAAGACTGGATGAG 58 NA Mus musculus 50 Gfra3 ENSMUSG00000024366 ENSMUST00000025224 1 1 1 103 18 34870841 34870859 CTCTGATAGACTGCAGGTG 59 34864214 34870774 CAACTCGTAGTCACCAAGG 59 NA Mus musculus 50 2810439F02Rik ENSMUSG00000024424 ENSMUST00000025294 1 1 1 80 18 12887226 12888508 TTCTGTGAAGAAGGCTGAG 59 12888552 12888570 TAGAGCACTTCAATGGAGG 58 NA Mus musculus 50 Slmo1 ENSMUSG00000024530 ENSMUST00000025411 2 1 1 110 18 67633471 67636453 TGTGCTCCACCAATATCAC 59 67636625 67636643 TGATGGCTTCTTGAGTGAG 59 NA Mus musculus 50 Slc27a6 ENSMUSG00000024600 ENSMUST00000025500 2 1 1 82 18 58767468 58768833 CACTTTCAGGTGGAAAGGA 59 58768879 58768897 TTGCTTCCTGGATGAAGTC 59 NA Mus musculus 50 Txndc10 ENSMUSG00000024614 ENSMUST00000025515 3 1 1 92 18 90680682 90680701 GATCTGGCTGTTTGTAAAGG 58 90683626 90686794 TGCATAGAAATCAACAAGCC 58 NA Mus musculus 50 1700034H14Rik ENSMUSG00000024645 ENSMUST00000025547 2 1 1 109 18 85117131 85117237 GAAGTGGAAGAGAACCCAG 59 85117040 85117058 TAACTTTGTTCGGAACGGT 59 NA DesignRelaxed Mus musculus 50 Htr7 ENSMUSG00000024798 ENSMUST00000099505 2 1 2 69 19 36038919 36038938 CACTGGAGAATTTACCTTGG 58 36034888 36038888 GTCAGTGCAACAGAATTCAC 59 NA DesignNoJunction Mus musculus 50 Uhrf2 ENSMUSG00000024817 ENSMUST00000025739 1 1 2 80 19 30149753 30152516 GAATACTGGTATTGTCCTTCC 57 30152557 30152576 CTTCTTACTCAGCTTGAGTC 57 NA Mus musculus 50 Cutc ENSMUSG00000025193 ENSMUST00000112047,ENSMUST00000026199 1 2 2 80 19 43837463 43837482 AGGACTGCCTCTAATAAAGC 59 43839475 43841709 TTATCTGTTATTCCACCTCCTG 59 NA Mus musculus 50 Phf6 ENSMUSG00000025626 ENSMUST00000078944,ENSMUST00000101587 3 2 2 87 X 50293493 50293511 TAACCTTAAAGGCTTGCCA 59 50293562 50293725 AGACCTATCTCGGTAGGAG 58 NA Mus musculus 50 Slco3a1 ENSMUSG00000025790 ENSMUST00000098371,ENSMUST00000026897 2 2 2 97 7 81448013 81448031 CCCTTCTGTCATCATCCTC 59 81429547 81442116 GGATGAAACCCAACAAACG 59 NA Mus musculus 50 Abcb6 ENSMUSG00000026198 ENSMUST00000027396 3 1 1 80 1 75174328 75174503 GGACATTGTGAACTTACTGAC 58 75174268 75174288 AACTTGAGGAAGACATAGGTG 59 NA Mus musculus 50 Stk16 ENSMUSG00000026201 ENSMUST00000027401,ENSMUST00000113618 1 2 2 80 1 75208707 75209180 GCCCTTCTTCAAGAAAGGT 59 75209224 75209242 ATCTGGTCTTCAGTCAGGA 59 NA Mus musculus 50 2810459M11Rik ENSMUSG00000026227 ENSMUST00000027429 3 1 1 90 1 87945199 87945217 TACTGACTTGCTTCTCCTG 58 87945271 87949537 AACTGGAGGTGTTCTTGAG 59 NA Mus musculus 50 Tor1aip1 ENSMUSG00000026466 ENSMUST00000097528,ENSMUST00000027738,ENSMUST00000097527 2 3 3 82 1 157878547 157878565 CCATTAAGAAGCCCAAGAC 58 157870302 157877519 TGGACAATGGTAGCTTCTC 58 NA Mus musculus 50 Niban ENSMUSG00000026483 ENSMUST00000086267,ENSMUST00000097541 2 2 2 84 1 153550982 153553123 TACATGCAAGAGCTCATGG 59 153553171 153553189 GTATTCTGGAAGCCTCTCC 59 NA Mus musculus 50 Rnf2 ENSMUSG00000026484 ENSMUST00000076110 1 1 1 80 1 153323322 153323341 CAACAAACACAACAATCAGC 58 153320466 153323279 CGCTGTAATCTGTTCATGG 58 NA Mus musculus 50 Suv39h2 ENSMUSG00000026646 ENSMUST00000027956,ENSMUST00000060618,ENSMUST00000100458,ENSMUST00000115062 1 4 4 81 2 3375993 3377039 TCAAATGAAAGGTTCTGGAG 57 3375931 3375949 TTTACATTGGGTTCTGACC 57 NA Mus musculus 50 Fubp3 ENSMUSG00000026843 ENSMUST00000113482,ENSMUST00000113473,ENSMUST00000055244,ENSMUST00000113477 3 4 4 80 2 31438709 31438728 ATAATTCCACACCTCTGGTG 59 31438770 31447991 GGTTACCTACTCCATCATCC 58 NA Mus musculus 50 Wdr5 ENSMUSG00000026917 ENSMUST00000113953,ENSMUST00000113952 3 2 2 83 2 27389309 27389330 GATAACCTGGTGTATATCTGGA 58 27389373 27390293 CGTGGAAATCACAACATCTG 59 NA Mus musculus 50 Fcna ENSMUSG00000026938 ENSMUST00000028307 3 1 1 227 2 25483053 25483271 CAGATGTTAAGGTCGTAGGT 58 25482176 25482194 CTCCTGTATCGCCTTTCTC 59 NA DesignNoJunction Mus musculus 50 Slc28a2 ENSMUSG00000027219 ENSMUST00000110525,ENSMUST00000028652,ENSMUST00000110524,ENSMUST00000110526 2 4 4 104 2 122272708 122273515 TGTGTTTAGCTTATGCTGC 58 122273583 122273601 AAGCCAGGATGAAGATCAC 59 NA Mus musculus 50 Zc3h8 ENSMUSG00000027387 ENSMUST00000028866 2 1 1 93 2 128761272 128765587 CCCAAGAAATTTAAGCACCT 58 128761198 128761218 CACTATATGGGTCATAGTCCT 57 NA Mus musculus 50 Tbc1d20 ENSMUSG00000027465 ENSMUST00000028963 2 1 1 87 2 152127998 152128017 CTGACTGATGAGATCAGGTG 59 152128067 152130693 GAAGGTCCTTCCTTGACAC 59 NA Mus musculus 50 Pcmtd2 ENSMUSG00000027589 ENSMUST00000029116 3 1 2 114 2 181581239 181581260 GTATGATCGTGTTTATTGTGGG 59 181581334 181586299 CTTGGTCAACTTCTCTTCCA 59 NA Mus musculus 50 Procr ENSMUSG00000027611 ENSMUST00000029140 3 1 1 80 2 155579273 155579291 TCTATCTGACCCAGTTCGA 59 155579332 155579990 TAACAGTGAGAGGAAAGAACAC 59 NA Mus musculus 50 Cog6 ENSMUSG00000027742 ENSMUST00000036665,ENSMUST00000029305 3 2 2 81 3 52806457 52811182 GCCTGTCTTATACAAGTATACC 57 52806397 52806416 AAGAGCATCAATAAACCCAC 58 NA Mus musculus 50 Ndst3 ENSMUSG00000027977 ENSMUST00000106420,ENSMUST00000029602,ENSMUST00000106419,ENSMUST00000106418 2 4 4 93 3 123255591 123259720 GGGATTGATTGGTACATGG 57 123255516 123255537 CCTCTGAATGGAAGTAATTAGC 58 NA Mus musculus 50 Dkk2 ENSMUSG00000028031 ENSMUST00000029665 3 1 1 94 3 131836887 131837940 GCTGCAATAATGGAATCTGC 59 131837997 131838015 ATGGTTGCGATCTCTATGC 59 NA Mus musculus 50 Rorc ENSMUSG00000028150 ENSMUST00000029795,ENSMUST00000107292,ENSMUST00000098877,ENSMUST00000096195 3 4 4 128 3 94191407 94191425 GTAATGTGGCCTACTCCTG 59 94191517 94192684 CAAACTTGACAGCATCTCG 59 NA Nonspecific Mus musculus 50 Ppp3ca ENSMUSG00000028161 ENSMUST00000098590 3 1 3 150 3 136531674 136539056 GGTACTTCAGTATCGAATGTG 58 136598008 136598029 CTAGTGATCTTATGTTGTGGTG 58 NA Mus musculus 50 Car9 ENSMUSG00000028463 ENSMUST00000030183 3 1 2 98 4 43524768 43524787 GATATGAAGGGTCTCTGACC 58 43524848 43525023 GAGTATGGAGCTGCTTAGC 59 NA Mus musculus 50 4930555I21Rik ENSMUSG00000028801 ENSMUST00000063707 3 1 1 96 4 135075270 135075288 CTTCAGCAATTCCTGTTCC 58 135075348 135081343 GATGGAGGCATTGTAATGG 58 NA Mus musculus 50 Csf3r ENSMUSG00000028859 ENSMUST00000106162,ENSMUST00000030673,ENSMUST00000106163 1 3 3 80 4 125717131 125719912 AGGACCCTAGATCCATCTG 59 125719956 125719974 GGTCACTACACAGGTAGTG 59 NA Mus musculus 50 Arhgef19 ENSMUSG00000028919 ENSMUST00000105791 3 1 3 189 4 140796651 140800743 CTGCTTTAGAGTCTCCAGAG 59 140802100 140802121 CATTCCTTCTTTACTCTGTCAC 58 NA InUTR Mus musculus 50 Rgs12 ENSMUSG00000029101 ENSMUST00000030984,ENSMUST00000087684,ENSMUST00000114281,ENSMUST00000114280 3 4 4 93 5 35371267 35372663 CTTCTCGAGGGAAAGTGTC 59 35372720 35372738 ATAGCCAAGTGGTTTCTGG 59 NA Nonspecific Mus musculus 50 Sgcb ENSMUSG00000029156 ENSMUST00000081170,ENSMUST00000087175 2 2 2 82 5 74031970 74031988 GCTTTATAAGAGCACGGTG 58 74031204 74031924 CTTGCTGGAAGACAATTGG 59 NA Mus musculus 50 Sult1b1 ENSMUSG00000029269 ENSMUST00000031199 2 1 1 95 5 87963043 87963970 CTAAATCAGGTACTACTTGGC 57 87962968 87962988 CTTTGGAGGTGATAACATCTC 58 NA Mus musculus 50 Dmp1 ENSMUSG00000029307 ENSMUST00000066708 2 1 1 93 5 104636611 104636630 TGCCAGATACCACAATACTG 59 104638946 104639135 TGATGACTCACTGTTCGTG 59 NA Mus musculus 50 Psmd9 ENSMUSG00000029440 ENSMUST00000060664,ENSMUST00000100729,ENSMUST00000100728 2 3 3 193 5 123684694 123689558 ACAACATCATCTGTCTCCAG 59 123689714 123689732 GATACTGTTCACTCTGGCA 58 NA Mus musculus 50 Uncx ENSMUSG00000029546 ENSMUST00000031523 1 1 1 119 5 140020504 140020522 TTCAATGAGAGCCACTACC 58 140022618 140022636 CTTCTTTCTCCATTTGGCC 58 NA DesignNoJunction Mus musculus 50 Calu ENSMUSG00000029767 ENSMUST00000031779,ENSMUST00000090481 2 2 2 89 6 29316187 29316205 TGAAAGACATAGTCGTGCA 58 29316967 29322479 ACATGTCACCAATGTACTCC 59 NA Mus musculus 50 5830411G16Rik ENSMUSG00000029787 ENSMUST00000031805 2 1 1 80 6 56678631 56678649 CATTAGAAGGATCGCAGGT 59 56679749 56680648 ACAGGATCAAGACCTTGTG 59 NA Mus musculus 50 Usp18 ENSMUSG00000030107 ENSMUST00000032198 2 1 1 80 6 121212835 121218575 CAAGGAACAGTCTGAAATACAC 59 121218615 121218634 GCACAGTAATGACCAAAGTC 59 NA Mus musculus 50 Klra13 ENSMUSG00000030178 ENSMUST00000112004 2 1 1 101 6 130241315 130248728 TCTAAACTTGCCTTGAACAC 58 130241233 130241252 GTATGATTTACCACAGTCCC 57 NA DesignRelaxed Mus musculus 50 Cmas ENSMUSG00000030282 ENSMUST00000032419 2 1 1 80 6 142712882 142712900 TTCTGAAACGTCCAAAGAC 57 142712943 142713086 ACAATGTCAACCTCATTGTG 58 NA Mus musculus 50 Ckm ENSMUSG00000030399 ENSMUST00000003643 2 1 1 60 7 20004860 20004878 GGGAGGCAATATGAAGGAG 59 20004902 20005464 CTCCTCAATCTTCTGCAGG 59 NA DesignRelaxed Mus musculus 50 4930404H21Rik ENSMUSG00000030976 ENSMUST00000033275 2 1 1 178 7 140787006 140793657 AAGATGGTTCACTCACACTG 59 140786130 140786148 TGTCATGCACAGAGAAAGG 59 NA DesignNoJunction Mus musculus 50 Itgb1bp2 ENSMUSG00000031312 ENSMUST00000033674 1 1 1 80 X 98646952 98646973 CACTTCTTATATCTCAAGCCCT 59 98647014 98647136 TATTGTCAAGTCCTGCTCC 58 NA Mus musculus 50 Renbp ENSMUSG00000031387 ENSMUST00000116578,ENSMUST00000114379,ENSMUST00000033762,ENSMUST00000114377 1 4 4 88 X 71171609 71171627 GGGTTATAGTGACAGTGGG 59 71167762 71171557 ACTCAGGATCACGAAACTG 59 NA Mus musculus 50 Vps36 ENSMUSG00000031479 ENSMUST00000033866 1 1 1 81 8 23320928 23322017 CAGAGGATGAGACCATCAG 58 23322062 23322080 GAGCCATAGGTTTCTCTGG 59 NA Mus musculus 50 Ankrd10 ENSMUSG00000031508 ENSMUST00000033905 1 1 1 137 8 11615904 11619073 CTAGAACCAGAGTTCCCAG 58 11612918 11612937 TATTCAACACGGAGCTACTG 59 NA Mus musculus 50 Ikbkb ENSMUSG00000031537 ENSMUST00000033939,ENSMUST00000063401 1 2 2 82 8 23776102 23776295 TACACAGCTCAGTAAGACC 58 23776038 23776056 TCATAAGGCTCACTACCTC 57 NA Mus musculus 50 4933411K20Rik ENSMUSG00000031631 ENSMUST00000034048,ENSMUST00000110376 1 2 2 80 8 47255995 47267079 ATCTGTTGAAAGCTTTCCTG 58 47267121 47267140 TCCTAGGTATTATTGCAGGC 58 NA Mus musculus 50 2210023G05Rik ENSMUSG00000031877 ENSMUST00000043183 1 1 1 81 8 107491348 107491671 GCATGAAACTTAACCTCACTG 59 107491714 107491732 CCATGTCTTGCAAAGTTGG 59 NA Mus musculus 50 Kars ENSMUSG00000031948 ENSMUST00000034426,ENSMUST00000093120 1 2 2 80 8 114525436 114525455 CAGAAATTTATCGTCCGCTC 59 114524081 114525394 AGTTTCGATCTCTAGGAAGC 58 NA Mus musculus 50 2310030G06Rik ENSMUSG00000032062 ENSMUST00000034564 3 1 1 121 9 50548844 50549408 GCACAAAGGACTATGAGAC 57 50548741 50548759 ATGAATGTCCGCATAATGC 58 NA Mus musculus 50 Pus3 ENSMUSG00000032103 ENSMUST00000034615 3 1 1 90 9 35372701 35372719 GACCCGACTAGTAGAAAGC 59 35372772 35372883 AGAAATCACCTGTCCAAAGG 59 NA Mus musculus 50 Slc37a2 ENSMUSG00000032122 ENSMUST00000115068,ENSMUST00000034638 1 2 2 80 9 37048917 37048936 TCAGACCTGTTAATGACACC 59 37048738 37048876 CCTTGTAGTCATCTTTGTCGA 59 NA Mus musculus 50 rp9 ENSMUSG00000032239 ENSMUST00000115301,ENSMUST00000034763 3 2 2 93 9 22258309 22261830 CAAAGTTATGCAATGTTGGC 58 22258235 22258253 TTCTAACTTCTGGTTGCCT 58 NA Mus musculus 50 Elovl4 ENSMUSG00000032262 ENSMUST00000034796 2 1 1 85 9 83683635 83683653 CCAAATGCGCTTAGTACTC 58 83681941 83683588 ATGATCCCATGAATAGCTCTC 59 NA Mus musculus 50 Gclc ENSMUSG00000032350 ENSMUST00000034905 1 1 1 80 9 77639910 77639928 CATGGAAGTTGATGTGGAC 58 77639970 77640856 ATTAGTTCTCCAGATGCTCTC 59 NA Mus musculus 50 Rasgrf1 ENSMUSG00000032356 ENSMUST00000034909 3 1 2 122 9 89806417 89810334 TAGGACAGAGATCGGTACC 59 89810419 89810438 ATCAATCTACAGGGATGGTG 58 NA Mus musculus 50 Dapk2 ENSMUSG00000032380 ENSMUST00000034944 1 1 1 80 9 66094346 66098155 ATTTGTTGCTCCAGAAATCG 59 66098884 66098905 ATATAGGTGATGACTCCAATGC 59 NA Mus musculus 50 Mrps22 ENSMUSG00000032459 ENSMUST00000035034 3 1 1 84 9 98497394 98498562 TTGGAAGAGGCTACTAGAC 57 98497328 98497347 TTATTGGCTTTCGTTCTTCC 58 NA Mus musculus 50 Armc8 ENSMUSG00000032468 ENSMUST00000035043 1 1 1 80 9 99406116 99406135 CTATGATGGACCGAATTGTG 58 99405752 99406073 AACTGTGCAAACATCTGAC 58 NA Mus musculus 50 Lrrfip2 ENSMUSG00000032497 ENSMUST00000098339,ENSMUST00000035078,ENSMUST00000098340 1 3 3 80 9 111102272 111102290 AGGATGTCATTGAAGAGCA 58 111102333 111108271 GCCTTTCTAACTCCTTTGAC 58 NA Mus musculus 50 Rbm6 ENSMUSG00000032582 ENSMUST00000112323,ENSMUST00000035201 1 2 2 81 9 107735817 107735835 ACGACTATGGCTATGTCTG 58 107703094 107735772 ATTAGAGTTCCCTGGTTGG 58 NA Mus musculus 50 Nt5m ENSMUSG00000032615 ENSMUST00000102695 2 1 1 80 11 59666328 59666346 CTTCTTTGAACTTGAGCCT 57 59666389 59674266 ATGAAGACATCAGTGTTCTG 57 NA Mus musculus 50 Atxn2l ENSMUSG00000032637 ENSMUST00000040202 3 1 1 80 7 133638757 133638777 GAAGAAGTCTACTTTGAACCC 58 133638221 133638718 GTACTGGTAGATTTGTTCACAG 58 NA Mus musculus 50 2810474O19Rik ENSMUSG00000032712 ENSMUST00000046689 2 1 1 138 6 149280020 149283124 GTCAAAGAGATAGTGCTGAC 57 149283225 149283243 CTGCTTCTCTTCTCAAGGT 58 NA Mus musculus 50 Bmp8a ENSMUSG00000032726 ENSMUST00000040496,ENSMUST00000102641 2 2 2 126 4 122993665 122994112 GATCTTTGATGATGGCCAC 58 122993159 122993177 GTAATAGGCAGAGTAGCCC 58 NA Mus musculus 50 Lrrc14 ENSMUSG00000033728 ENSMUST00000036423 1 1 1 101 15 76544348 76544366 TTTATGTGTCTTCGGGAGC 59 76544525 76544543 CAGTTCTAGGCTTTCCAGG 59 NA DesignNoJunction Mus musculus 50 BC026782 ENSMUSG00000033898 ENSMUST00000094484 3 1 3 119 1 141762739 141786811 CATGTTATGACTCAACAAGGAC 59 141762641 141762659 ACTTCTGGCACTGATAGTC 58 NA Mus musculus 50 Zdhhc15 ENSMUSG00000033906 ENSMUST00000042070 2 1 1 82 X 101756074 101756092 TGAATGAGTCACAGAACCC 59 101740230 101756029 GCCTTCTGGATAATCTCGAC 59 NA Mus musculus 50 Lsm3 ENSMUSG00000034192 ENSMUST00000040607 3 1 1 114 6 91467047 91467065 GACCACCAATACCGTAGAG 59 91467142 91469551 ATCATAAGCGTGTAGTCTGC 59 NA Mus musculus 50 Loxl2 ENSMUSG00000034205 ENSMUST00000022660,ENSMUST00000111062,ENSMUST00000100420 3 3 3 98 14 70088862 70088880 TTACTATGACCTGCTGAGC 58 70088942 70089950 TTCTGAATGTCTCCCTCAC 58 NA Mus musculus 50 Batf ENSMUSG00000034266 ENSMUST00000040536 2 1 1 133 12 87027922 87030235 AGGACTCATCTGATGATGTG 58 87049501 87049519 GTTCTGTTTCTCCAGGTCC 59 NA DesignNoJunction Mus musculus 50 Mtmr3 ENSMUSG00000034354 ENSMUST00000040448,ENSMUST00000093376,ENSMUST00000109943 1 3 3 80 11 4420912 4427852 AGTCTCTTGTCAATGTTCCA 58 4420851 4420870 CTTTGCATGTCAAATGAAGC 58 NA Mus musculus 50 Lif ENSMUSG00000034394 ENSMUST00000066283,ENSMUST00000109953,ENSMUST00000109951,ENSMUST00000040750 2 4 4 68 11 4168314 4168332 CAAGAATCAACTGGCACAG 59 4168363 4168940 CCTTGAGCTGTGTAATAGGA 58 NA DesignRelaxed Mus musculus 50 Dhcr24 ENSMUSG00000034926 ENSMUST00000047973 3 1 1 84 4 106237087 106237106 GGAAAGTACAAGAAGACCCA 59 106237151 106244026 CTCGAACAATCTGTTTCTTGG 59 NA Mus musculus 50 Kri1 ENSMUSG00000035047 ENSMUST00000038671 3 1 1 88 9 21089686 21089705 GGTCATCTTGGAGAAAGGAG 59 21086530 21086623 TTGTGGATGTTTCCTGGAG 59 NA Mus musculus 50 Mtmr9 ENSMUSG00000035078 ENSMUST00000058679 2 1 1 80 14 64159209 64161195 GTTCCATTGAGGCATTGTC 59 64159147 64159167 CAATCACTTCAAACATGGGTC 59 NA Mus musculus 50 Gnptg ENSMUSG00000035521 ENSMUST00000115154,ENSMUST00000038973 3 2 2 80 17 25371799 25371817 ACAGGAGGTACAAAGACTG 58 25371652 25371755 TGAGAGTGAGTGGTTTCTG 58 NA Mus musculus 50 Fbxo45 ENSMUSG00000035764 ENSMUST00000042732 2 1 1 115 16 32233349 32238500 GCACCAAAGTATCAGATAGGA 59 32233254 32233272 TTTGGAAGTCCTCGAAAGG 59 NA Mus musculus 50 Oprs1 ENSMUSG00000036078 ENSMUST00000071561 1 1 2 212 4 41687745 41687763 CAGTGGGTATTTGTGAACG 58 41686356 41686374 GGTAGACGGAATAACACCC 59 NA DesignNoJunction Mus musculus 50 Il5 ENSMUSG00000036117 ENSMUST00000048605 3 1 1 64 11 53534470 53535316 AAGCAATGAGACGATGAGG 59 53537213 53537231 TTTCTCCAATGCATAGCTG 57 NA DesignNoJunction Mus musculus 50 Glt6d1 ENSMUSG00000036401 ENSMUST00000038010 3 1 1 81 2 25650708 25650728 GTCCTGGAGACATATTTCAGG 59 25650230 25650666 GGTACTTGTCAGTGAGACTG 59 NA Mus musculus 50 Card11 ENSMUSG00000036526 ENSMUST00000085786 1 1 1 80 5 141375729 141376937 GGGATAAGTACCTGGAGGA 59 141375667 141375686 GGTGCTTGTACATTTCACAG 59 NA Mus musculus 50 Eif2c2 ENSMUSG00000036698 ENSMUST00000044113 3 1 1 109 15 72955674 72955692 CAGTACTTCAAGGACAGGC 59 72954669 72955602 ATGTTACAGACCTCCAAAGG 59 NA Mus musculus 50 Cst13 ENSMUSG00000036924 ENSMUST00000046589 3 1 1 85 2 148648981 148649000 AGAATATAACAAGGCCAGCA 59 148649048 148653891 CCAGACTGTCTGTGATCTG 59 NA Mus musculus 50 Sh3md4 ENSMUSG00000037990 ENSMUST00000099724 1 1 2 81 10 58446931 58469794 TGACCTTCACTAAGGACGA 59 58469839 58469857 ATCTTGTCTCCTAGCATGC 59 NA Mus musculus 50 4931409K22Rik ENSMUSG00000038199 ENSMUST00000088302 2 1 1 82 5 24052505 24052673 ACTACATTGGTGATTGCCT 58 24052441 24052459 CCGGATATCAAACAGGGAC 59 NA Mus musculus 50 Rras ENSMUSG00000038387 ENSMUST00000044111 3 1 1 92 7 52276499 52276518 ATGACTTACTTTGAGGCCTC 59 52276573 52276665 TTGTTCCTGGTATTTCCGG 59 NA Mus musculus 50 Mllt6 ENSMUSG00000038437 ENSMUST00000107586,ENSMUST00000044730 2 2 2 82 11 97531658 97533781 CTGATAAGGTCTCCTCAGC 58 97533827 97533845 CTTTGAGTCCCTGCTACTC 59 NA Mus musculus 50 Jarid2 ENSMUSG00000038518 ENSMUST00000044608 2 1 1 81 13 45002946 45005722 AGAGATTGAGCAAGAGTACTG 59 45005765 45005783 ATTAGTGTCCACCTTTCCG 59 NA Mus musculus 50 Nepn ENSMUSG00000038624 ENSMUST00000067085 3 1 1 153 10 52121049 52123711 GTTGTCTATCCCTCTGAGG 58 52123828 52123846 CTTGAAATCTAAGGCCGAG 57 NA DesignNoJunction Mus musculus 50 En2 ENSMUSG00000039095 ENSMUST00000036177 3 1 1 61 5 28496840 28496859 GATTTGGTTCCAGAACAAGC 59 28496883 28496901 CCAAAGTGTTCTTGTTGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2010110K16Rik ENSMUSG00000039163 ENSMUST00000044220 2 1 1 85 9 117984291 117984309 ACTCTGGGATCCTTATGGT 59 117974451 117984245 GGCTGGATCATTATAGTAAGCA 59 NA Mus musculus 50 BC067047 ENSMUSG00000039621 ENSMUST00000036719,ENSMUST00000099080,ENSMUST00000109246 3 3 3 88 2 166403438 166403456 ATCAGTATCCAGGAGGACC 59 166402196 166403386 TTCTTTCCATCTTCCACGT 58 NA Mus musculus 50 4833442J19Rik ENSMUSG00000039958 ENSMUST00000111548 2 1 4 131 6 149091225 149092562 CCAGTTCAATCAGAGATCCA 59 149092653 149092674 CATTAGTACATCTCCAAACCTC 58 NA InUTR Mus musculus 50 Arntl2 ENSMUSG00000040187 ENSMUST00000111639,ENSMUST00000080530,ENSMUST00000111638,ENSMUST00000111636 3 4 4 83 6 146759376 146761746 TTAATCCTCAAGGCAGCAG 59 146761792 146761811 GGAGACAGACTTAGAAACGT 59 NA Mus musculus 50 Zfp770 ENSMUSG00000040321 ENSMUST00000050668 3 1 1 60 2 114022162 114022182 CCGAACATAGAACAAACTCAG 58 114022122 114022140 TGTATGAACCATGTCTGCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Iqsec3 ENSMUSG00000040797 ENSMUST00000046373,ENSMUST00000051049 1 2 2 81 6 121336642 121336660 CGATGTGAACAAGCTACAG 58 121334308 121336598 TAGCTTGAGAATCACAAGCA 59 NA Mus musculus 50 Iqsec2 ENSMUSG00000041115 ENSMUST00000112605,ENSMUST00000080074,ENSMUST00000096275 2 3 3 60 X 148645901 148646569 AGAGATGTGTTGGACTGTG 59 148646592 148646611 CATCGTCCAAATCCATAGAG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Elovl6 ENSMUSG00000041220 ENSMUST00000071402 2 1 1 124 3 129331240 129331258 CATTCTGATGACCAAAGGC 58 129331345 129335989 ATATCGTGTCACCTAGTTCG 58 NA Mus musculus 50 Capza3 ENSMUSG00000041791 ENSMUST00000043797 2 1 1 60 6 139990492 139990511 AATCAACTGAGGGATATCCA 57 139990534 139990552 ATCTTAGGTACTCGGTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Armc5 ENSMUSG00000042178 ENSMUST00000044660 2 1 1 140 7 135382101 135383411 TGGTGACCATTCTTCAGTG 59 135383606 135383626 TAAGGCTCTCAACAAGAAAGG 59 NA DesignNoJunction Mus musculus 50 Zfp410 ENSMUSG00000042472 ENSMUST00000045931,ENSMUST00000110285 1 2 2 80 12 85663905 85663924 CATTACTTGCTTATCCCTCC 57 85663966 85666536 TGATTTGGAGTTTCATCTGG 57 NA Mus musculus 50 Tbc1d10b ENSMUSG00000042492 ENSMUST00000035643 3 1 1 80 7 134346987 134347265 GTTTCCAGAAGGTAAAGCTG 58 134346926 134346945 TATTAGACAGGTACTGCCAG 58 NA Mus musculus 50 Nmnat2 ENSMUSG00000042751 ENSMUST00000043313 2 1 1 85 1 154941233 154959280 ATGAGGCAGATATGGAAGTG 59 154959328 154959346 ATTCATGATCCGGTCTGTG 59 NA Mus musculus 50 Endogl1 ENSMUSG00000042787 ENSMUST00000035094 2 1 1 125 9 119361451 119371503 TAGTTACCAGGTGATTGGTG 59 119371591 119371609 TTATTTGGCACCACAAAGG 58 NA Mus musculus 50 Morf4l1 ENSMUSG00000043223 ENSMUST00000077786 1 1 1 62 18 16147897 16147915 TTGGTTCTTCGTCCTTCTC 59 16147939 16147959 CTCTGTTATACACTAACGGTC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Pigv ENSMUSG00000043257 ENSMUST00000067902 2 1 2 86 4 133218699 133225663 TAGTGCTACAGGTTCTCAC 58 133218631 133218649 GTTCTTGATCCTGAAGCAG 58 NA Mus musculus 50 Olfr922 ENSMUSG00000043911 ENSMUST00000051004 2 1 1 60 9 38623907 38623926 TGTCCACTGTATTCTACACC 58 38623947 38623967 CTGAAGCTGTAGATCAAAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Crb3 ENSMUSG00000044279 ENSMUST00000071826,ENSMUST00000112924,ENSMUST00000097299 3 3 3 73 17 57203075 57203094 CAAATAGCACAACTCAACCC 59 57204521 57204539 AGTGATGGCTACAATAGCC 59 NA DesignNoJunction Mus musculus 50 1700001O22Rik ENSMUSG00000044320 ENSMUST00000050003 1 1 1 96 2 30651732 30651750 ACCTACCCTTCATCTCCAG 59 30651315 30651673 AGAAAGGATTCCTGATCCAC 59 NA Mus musculus 50 Trp53i13 ENSMUSG00000044328 ENSMUST00000094005,ENSMUST00000060417 1 2 2 66 11 77326180 77326400 AGGTGTTACCAAGAGTGAC 58 77323206 77323224 TAGAAGAAGGCGATACCCT 59 NA DesignNoJunction Mus musculus 50 EG237300 ENSMUSG00000044624 ENSMUST00000055107 3 1 1 73 10 18504799 18505500 GCACCTCATTTCCTTTGAC 59 18504744 18504762 AGCTCTGATGACTCATCCT 59 NA DesignNoJunction, InUTR Mus musculus 50 Tmem201 ENSMUSG00000044700 ENSMUST00000054459,ENSMUST00000105687,ENSMUST00000103208,ENSMUST00000052951 2 4 4 110 4 149103719 149103739 TCGAGTACTACATCAAACACC 59 149102345 149103647 CCGAGGAACTGAAACTCTG 59 NA Mus musculus 50 Defb10 ENSMUSG00000044743 ENSMUST00000054162 2 1 1 63 8 22972361 22972382 CTGGTAATAGCAGGTTTATGAG 58 22972405 22972424 TTTATGTTCTTGCAACAGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tst ENSMUSG00000044986 ENSMUST00000058659 1 1 1 73 15 78230458 78235684 GAGCCGGATATAGTAGGAC 58 78230403 78230421 GTCAGGAAGTCCATGAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 E130308A19Rik ENSMUSG00000045071 ENSMUST00000070150 2 1 2 131 4 59704089 59704107 CTCATCATGTGAGGTAGCC 59 59704200 59750443 GTAGAATAAGCTGGAATGCAC 59 NA Mus musculus 50 6330549D23Rik ENSMUSG00000045327 ENSMUST00000059190 3 1 1 67 3 96412014 96412032 TGTACAAGTCTTGCCAGAG 59 96411965 96411986 TGTTAATGACTTTAGGGATGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr710 ENSMUSG00000045581 ENSMUST00000055923 3 1 1 60 7 114088250 114088268 AGTCCACTTTCTAGGTGTC 58 114088208 114088226 AAACATTTGCACTGAGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mcart1 ENSMUSG00000045973 ENSMUST00000107796,ENSMUST00000116341 3 2 3 85 4 45417649 45417667 TAACAATGGACAACACTGG 57 45413035 45417603 GGAAGAGTTTCTTTAACCTGTG 59 NA DesignRelaxed, InUTR Mus musculus 50 B3gat1 ENSMUSG00000045994 ENSMUST00000115269,ENSMUST00000067362,ENSMUST00000067400 2 3 3 112 9 26564516 26564534 CTTTAAGCTACGTGGTGTG 58 26564609 26565287 AGACCAAGATCTTGGTACAG 58 NA Mus musculus 50 Irgm ENSMUSG00000046879 ENSMUST00000049519,ENSMUST00000097271 1 2 2 60 11 48679745 48679763 GCTGTGAACCCTTAAAGAC 58 48679703 48679721 GCTACTTTATCACCAACGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr705 ENSMUSG00000047120 ENSMUST00000060879 1 1 1 60 7 114016870 114016890 TACAGCCTGAGGAATAAAGAG 58 114016830 114016849 CAATATACCTTCCCAGAACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr64 ENSMUSG00000047163 ENSMUST00000050903 2 1 2 185 7 111053887 111054819 TTCATGATGAAGAAAGCCC 57 111054968 111054986 GAAGAGGAAATGTTGAGCC 58 NA InUTR Mus musculus 50 BC028663 ENSMUSG00000048967 ENSMUST00000059500 2 1 1 60 8 72411732 72411750 AATATACTGGCACCGACTG 59 72411690 72411709 GTGGTGGAGATGTTTATTGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 4930469G21Rik ENSMUSG00000049160 ENSMUST00000053633 2 1 1 83 1 163084893 163086961 ATCTAGTGGAAAGGAAACTCTC 59 163084831 163084849 TGTTGGTTGGTATCTTGCA 59 NA InUTR Mus musculus 50 2310061F22Rik ENSMUSG00000049482 ENSMUST00000116412,ENSMUST00000054465 1 2 2 80 8 125003030 125003049 TTGTCTAGGTTGTTCAGCTC 59 125003092 125003192 CACAATCAGATGGGTCCTC 59 NA Mus musculus 50 Tmem67 ENSMUSG00000049488 ENSMUST00000108293,ENSMUST00000050686,ENSMUST00000108291,ENSMUST00000108290 2 4 4 80 4 11997488 11997610 TTCTGTTCCATTCTGGAGAC 59 11997427 11997446 GTACTGAGAACTTGAGGAGC 59 NA Mus musculus 50 Cdc42ep1 ENSMUSG00000049521 ENSMUST00000059619 2 1 1 175 15 78678173 78678192 CTATGACAGTCTGGTGATGG 59 78679675 78679693 CTCGGTCTTGAGAATGGTC 59 NA DesignNoJunction Mus musculus 50 Pitpnb ENSMUSG00000050017 ENSMUST00000058552,ENSMUST00000086635 2 2 2 81 5 111775584 111776801 CTGCAGAACAATTGTAACGA 58 111776845 111776863 TCCCAAGTCAGGTTTATGC 59 NA Mus musculus 50 Olfr690 ENSMUSG00000050266 ENSMUST00000061920 2 1 1 60 7 112478097 112478117 CAATATCTGGTATGGCTTCTC 57 112478057 112478076 AATGAGTGCAACATCTACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dscam ENSMUSG00000050272 ENSMUST00000056102 1 1 1 80 16 96871758 96873700 TGGATGAAGGATAGTAACGG 58 96871697 96871715 GATGAAACTCCCATTGCTG 58 NA Mus musculus 50 Pcdh20 ENSMUSG00000050505 ENSMUST00000061628 3 1 1 294 14 88870856 88870874 GCGATTTGCATGAACAGAG 59 88869452 88869470 TTTAGGCTGTACAGAAGCT 58 NA DesignNoJunction, InUTR Mus musculus 50 2900016B01Rik ENSMUSG00000050873 ENSMUST00000058886 3 1 1 141 8 15011313 15026667 AGACAGGAGCAAGAATGTG 59 15026772 15026790 GAAACCACTCCACCTATGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 1810063B05Rik ENSMUSG00000051671 ENSMUST00000059093 3 1 1 207 8 128946597 128946615 CTTCCATGAAGGAAAGGCA 59 128948958 128948976 GAAGACTGGAATCCTCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000052143 ENSMUSG00000052143 ENSMUST00000063858 2 1 1 83 9 60685715 60685733 GAAGGTCTCCTCTTTGCTG 59 60669681 60669700 CAGAAGCAGGAATCTGAGAG 59 NA DesignNoJunction Mus musculus 50 Psg24 ENSMUSG00000053228 ENSMUST00000108491 3 1 2 80 7 17740359 17740378 TACACCTTACGAACTCTGAG 58 17740421 17743465 GATTGAAAGACAGGTGTCC 58 NA Mus musculus 50 B830017H08Rik ENSMUSG00000053571 ENSMUST00000090145 2 1 1 250 16 17833434 17833452 GGCCAAATTTCAAATACCC 57 17833668 17834468 ACCATCTACATAGCCTCTG 57 NA DesignRelaxed Mus musculus 50 Tgm5 ENSMUSG00000053675 ENSMUST00000102489,ENSMUST00000028721 3 2 2 81 2 120900886 120900905 CGATTATGGCTTCATCTACC 57 120897338 120900844 GATATTCTCTTCAAACTGCCC 58 NA Mus musculus 50 Nlrp9a ENSMUSG00000054102 ENSMUST00000068612,ENSMUST00000108387,ENSMUST00000071780 1 3 3 90 7 27356352 27356371 GAATGCCTTTGACCATTCTG 59 27356424 27358834 AGATTTGTCCAGTCCAAGC 59 NA Mus musculus 50 Slfn5 ENSMUSG00000054404 ENSMUST00000108158,ENSMUST00000067443,ENSMUST00000108157 3 3 3 132 11 82770782 82772186 AATCAACCCAGACCTTTCC 59 82772281 82772300 AAAGTAATCCTTCTGCAGGT 58 NA Mus musculus 50 Spcs3 ENSMUSG00000054408 ENSMUST00000067476 3 1 1 86 8 55610352 55610370 AGAGGTGATAATCCGAAGC 58 55608737 55610300 ATTCCTGTTTCCCTTGAGG 59 NA Mus musculus 50 Cyp3a44 ENSMUSG00000054417 ENSMUST00000067479 3 1 1 99 5 146606392 146606489 GACTCAAGGAGATGTTCCC 59 146606311 146606329 TCTTTCATAGCAACAGGCA 59 NA Mus musculus 50 Ap1s3 ENSMUSG00000054702 ENSMUST00000067229 1 1 1 81 1 79620307 79620326 AGACAATGAGCTCTTGACAC 59 79610904 79620263 CAGCTCACAGACATTTCCA 59 NA Nonspecific Mus musculus 50 Msra ENSMUSG00000054733 ENSMUST00000067927,ENSMUST00000089333 2 2 2 85 14 65072356 65072374 GTGGAAAGACAATTGTGGT 58 65071303 65072307 TTCCTCGAAGAGTGTTCAG 58 NA InUTR Mus musculus 50 Olfr354 ENSMUSG00000055088 ENSMUST00000068475 3 1 1 60 2 36763312 36763331 TGATTGTAATTCCCATGCTG 58 36763353 36763372 TCTTTCATGTCTCTGTTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 2900002K06Rik ENSMUSG00000055188 ENSMUST00000068623 3 1 1 85 X 7723732 7724687 TCTGTAATTCCTGGCTGAG 58 7724736 7724754 GTTCCGTGTCACTTTAGTC 58 NA InUTR Mus musculus 50 Maf ENSMUSG00000055435 ENSMUST00000069009 3 1 2 149 8 118229715 118229734 AAATACGAGAAGCTGGTGAG 59 118208653 118217041 GTGTCTTCTCTGTTCAGCT 59 NA InUTR Mus musculus 50 Olfr222 ENSMUSG00000059610 ENSMUST00000071943 2 1 1 60 11 59384692 59384710 GCTGAACAACTTCTTCTGC 59 59384650 59384668 CGTAGTATCAGCACAGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr251 ENSMUSG00000062388 ENSMUST00000072731 2 1 1 60 9 38186215 38186234 CACATCATAACTGTTAGCCT 57 38186257 38186275 ATGTTGGCTTGATATAGGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Chia ENSMUSG00000062778 ENSMUST00000079132 3 1 1 82 3 105933644 105933748 CTTCAGTGTTAAGGCTCAG 57 105933794 105933812 CAGTGAAGTCATCAAGGTC 57 NA Mus musculus 50 ENSMUSG00000071613 ENSMUSG00000063277 ENSMUST00000090652 1 1 1 80 14 8476402 8476420 GAGAAGGAAGAGGGAATCC 58 8475608 8476360 AGTATTTCTAGCAGACCTGTG 59 NA Nonspecific Mus musculus 50 Rab3ip ENSMUSG00000064181 ENSMUST00000020375 3 1 1 84 10 116374703 116376266 CTAATATCAGCGCTCATGC 58 116374637 116374655 TTCCTGGAGGTTAACTTCG 58 NA Mus musculus 50 Nrxn3 ENSMUSG00000066392 ENSMUST00000110138 1 1 4 184 12 90034162 90034180 TCTCAAGTATGGCAACTCG 59 90034328 90071005 GACTGACATCTTCTGAGCA 58 NA Mus musculus 50 Klk1b5 ENSMUSG00000066512 ENSMUST00000074359 2 1 1 85 7 51475255 51475367 CACCCGTCATATACGAACC 59 51475416 51475434 TATGTGGGCTTTGACACAG 59 NA Mus musculus 50 Abpb ENSMUSG00000066584 ENSMUST00000108084 1 1 2 60 7 34798225 34798243 TTGCTTCAATGAGGAACCA 59 34798183 34798202 GGACGTTACCATTATTTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cyp2c66 ENSMUSG00000067229 ENSMUST00000087234 2 1 1 63 19 39216906 39237823 AAACCAAAGGTGTACCCTG 59 39237850 39237868 CAGATGACATTGCAAGGAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 EG667988 ENSMUSG00000067650 ENSMUST00000063726 1 1 1 60 X 88638222 88638240 GGATGAGCAACCTGTAGAG 59 88638264 88638282 GTGAACCTTGTACTTCCTG 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Htatsf1 ENSMUSG00000067873 ENSMUST00000088652,ENSMUST00000114751 3 2 2 83 X 54307304 54307322 CATTCTTTGGGACAACCAC 58 54307368 54308686 ATCTTCGGTGATCTTAGGGA 59 NA Mus musculus 50 Olfr461 ENSMUSG00000068259 ENSMUST00000089490 2 1 1 60 6 40494075 40494095 CAAATTCATAGAGGCCTTCAG 58 40494035 40494056 CTAATGTTTGAGAAGTTGGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG237433 ENSMUSG00000069540 ENSMUST00000092231 3 1 1 60 10 88193267 88193287 CCTATGTACATCAAGTTGGTG 58 88193227 88193248 CCTTAATTAGGTTGATCTGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000000913 ENSMUSG00000069796 ENSMUST00000092851 2 1 1 78 11 82448639 82448657 AACACAGCAGAAGAATCAG 57 82448699 82448717 GTCGAACATGTGAAAGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hba-a1 ENSMUSG00000069919 ENSMUST00000093209,ENSMUST00000093208 3 2 2 102 11 32184118 32184270 TCAACTTCAAGCTCCTGAG 59 32184336 32184354 GCAAGGAATTTGTCCAGAG 58 NA Nonspecific Mus musculus 50 Sp140 ENSMUSG00000070031 ENSMUST00000080204 3 1 1 110 1 87507472 87511384 CTTCTTCCTAAATGCATCCA 57 87511790 87511808 GGCTCTTGTCTTGTTTGTC 58 NA DesignRelaxed Mus musculus 50 NP_001025460.1 ENSMUSG00000070323 ENSMUST00000093896 1 1 1 80 9 7577390 7577409 ATTACATCTCCCTGGATCCT 59 7577451 7577643 GTGGACTTCCATAGATGGAC 59 NA Mus musculus 50 EG545925 ENSMUSG00000070797 ENSMUST00000094794 1 1 1 80 7 19150371 19150390 TACTCTTCGAACCATAAGCA 58 19147434 19150329 GTGAAATGAGAGGAGTACAC 57 NA Mus musculus 50 Ifnz ENSMUSG00000070908 ENSMUST00000094977 3 1 1 60 4 88453268 88453286 AAAGTCTCCTTTGATGCCA 59 88453307 88453328 GGGTTTAATATTTCAGGTCCAC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 EG574081 ENSMUSG00000071169 ENSMUST00000095436 1 1 1 62 8 19239924 19239942 CCATTACCTTCTCTTTGCA 57 19239968 19242040 ATTTGGATACAAGCTGCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Vmn2r122 ENSMUSG00000072049 ENSMUST00000096792 3 1 5 90 X 121243566 121244738 GGAGGAACAGTTTCTCAGG 59 121243494 121243512 AGTCTGCTGTTTCTTCCTG 59 NA Mus musculus 50 EG667719 ENSMUSG00000072479 ENSMUST00000114518,ENSMUST00000097221 1 2 2 80 X 70398481 70399534 GGATTTCAAAGGTGATGATGG 59 70399574 70399594 CTGAAAGAGGCATTTACATCC 59 NA Nonspecific Mus musculus 50 Snrpc ENSMUSG00000072511 ENSMUST00000100584 3 1 1 80 15 65779943 65780057 GGCCATCTACAACATTTCC 58 65779881 65779901 CTATTGCTCAAACAGTAGCAG 59 NA Mus musculus 50 Klra9 ENSMUSG00000072718 ENSMUST00000112020,ENSMUST00000063052 1 2 2 67 6 130229318 130229338 GACAGATGGAATAGTGAAACC 58 130225891 130229289 TATTTAACACCTCCGCCTG 59 NA DesignRelaxed Mus musculus 50 5033421C21Rik ENSMUSG00000072731 ENSMUST00000100890 3 1 1 88 14 7977368 7990661 CTATTCCTACAGGCATGAAGG 59 7977300 7977318 CAGACTTCCAGGAGAACAG 59 NA Mus musculus 50 Grcc10 ENSMUSG00000072772 ENSMUST00000004389 1 1 1 98 6 124690604 124690622 CAAGATGCTGCAATTTGTG 58 124689419 124690542 AACTTAAGGACACCTTCCC 58 NA Nonspecific Mus musculus 50 ENSMUSG00000072997 ENSMUSG00000072997 ENSMUST00000101275 3 1 1 64 6 75920407 75920425 TTTCTTGTGCTACATTGCC 58 75920361 75920379 AACAAATGAGCAGACAGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 G930045G22Rik ENSMUSG00000073072 ENSMUST00000101402 2 1 1 83 6 50796769 50796787 CAACAGAAAGTTGCCAAGG 59 50796699 50796722 TCCATTCTGCTCTTTCTGTC 59 NA Mus musculus 50 ENSMUSG00000073092 ENSMUSG00000073092 ENSMUST00000101431 3 1 1 60 12 55615393 55615413 ATTTGTCTATGCCTCAGAAGG 59 55615353 55615371 AGGTCAATAGCAAGTGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lrrc61 ENSMUSG00000073096 ENSMUST00000114545 3 1 2 222 6 48507064 48507082 TTCACACTCAGTTGATGTG 57 48518310 48518328 CAAATTCTCCTGAGTGGGA 58 NA DesignNoJunction, InUTR Mus musculus 50 4930599N23Rik ENSMUSG00000073144 ENSMUST00000101511 1 1 1 75 6 39068739 39068757 GAACAAACGGAAACAGTCG 59 39068796 39068814 CTTTCCTTCTGGAAATGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lst1 ENSMUSG00000073412 ENSMUST00000097336,ENSMUST00000113924,ENSMUST00000113923 3 3 3 129 17 35325303 35325321 TGGTAACAATTGCACAACC 58 35323536 35323895 TTCCAGTCTCTTCACTCTC 57 NA Mus musculus 50 Sh2d1b2 ENSMUSG00000073494 ENSMUST00000097470 2 1 1 90 1 172180241 172180260 GTGGTTCATCTTTCAAACCC 59 172180311 172181689 CAGTGTTCTCGTAAACATTCG 59 NA Mus musculus 50 5830472F04Rik ENSMUSG00000073623 ENSMUST00000097661 2 1 1 60 1 89693197 89693216 GTACTCACTGTTATGGAGAC 57 89693238 89693257 TTTAGGTTCTGTATTGCCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxo36 ENSMUSG00000073633 ENSMUST00000097672 1 1 1 80 1 84893170 84893188 AGATCATCTGCTACCTGGA 59 84893232 84896584 CACTCTTGCACAACTTCTC 58 NA Mus musculus 50 Olfr598 ENSMUSG00000073951 ENSMUST00000098202 3 1 1 65 7 110477580 110477598 TGCAGCAGATGATGTACAG 59 110477627 110477645 AATCCCAGAACGCTAAACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp791 ENSMUSG00000074194 ENSMUST00000098550 2 1 1 108 8 87643607 87643627 GCGGGACATTGTATAAATCTG 59 87637518 87643538 AAAGGTCACTGAATCCATGG 59 NA InUTR Mus musculus 50 Cox7a1 ENSMUSG00000074218 ENSMUST00000098594 1 1 1 61 7 30970338 30970356 CAACGTCCTGTACAGACTG 59 30970932 30970951 AGTATAAGCAGTAGGCAGTG 58 NA DesignNoJunction Mus musculus 50 4930432M17Rik ENSMUSG00000074248 ENSMUST00000098646 1 1 1 81 3 121374285 121374303 GATGGACTTCAAACTGGAG 57 121376928 121376946 TAAGACAGGAGGTGTATGG 57 NA DesignNoJunction Mus musculus 50 ENSMUSG00000074465 ENSMUSG00000074465 ENSMUST00000098926 2 1 1 81 9 24205482 24205501 TTAAATGCACCATTTGGTCC 59 24205544 24222769 AGTCACAGTTCCTCTTACTG 58 NA InUTR Mus musculus 50 Gm1006 ENSMUSG00000074665 ENSMUST00000109757,ENSMUST00000109759,ENSMUST00000099181 3 3 3 84 2 153785441 153787262 CAATGAATGCTATACTGGGT 57 153787309 153787327 TCCAACACATCAATGTCTG 57 NA Mus musculus 50 Olfr1306 ENSMUSG00000074954 ENSMUST00000099607 3 1 1 60 2 111752410 111752429 TGTCATCATAATCACTGTGC 57 111752369 111752389 AGTAGATAGGGCTTTAGAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1248 ENSMUSG00000075080 ENSMUST00000099770 1 1 1 60 2 89457806 89457825 TTTGCTTGTGACATATACCC 57 89457765 89457783 GTCCAAGGAAGTAAGTGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075295 ENSMUSG00000075295 ENSMUST00000100033 3 1 1 101 10 22124536 22124555 TACTTCTTTGTGGACCTCTG 58 22124619 22124637 GAGACTGTGTTCCTGAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Smok3b ENSMUSG00000075598 ENSMUST00000100537 2 1 1 108 5 138491042 138491060 AAAGAGACATCTCACCTGG 58 138491132 138491565 ATCCTCTGGTGATCTTCTG 58 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 Cyp11b1 ENSMUSG00000075604 ENSMUST00000100548 1 1 1 80 15 74669710 74669728 AAATGCTGGAAAGTGTCCA 59 74669530 74669666 AGTGGCTAGCTTCTATGGT 59 NA Mus musculus 50 mmu-mir-592 ENSMUSG00000076067 ENSMUST00000102113 3 1 1 62 6 27886705 27886723 TATGCGATGATGTGTTGTG 58 27886661 27886679 CTTACGTCATGATGTTGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-744 ENSMUSG00000076460 ENSMUST00000103261 1 1 1 60 11 65548282 65548300 GTCTTACTGACGGTTTCCT 58 65548240 65548259 AGTAAGGTTGAGGTTAGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRBV20 ENSMUSG00000076476 ENSMUST00000103277 2 1 1 60 6 41138276 41138297 TACTGCTTCTATTACTTCTGGG 59 41138687 41138706 GGATATTGATAGACGAGTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-81 ENSMUSG00000076539 ENSMUST00000103340 1 1 1 160 6 68941043 68941241 AGTCATAATGTCCAGAGGAG 58 68940902 68940920 AGAATTTGGTAGAAGTGCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV2-9-1 ENSMUSG00000076645 ENSMUST00000103454 1 1 1 60 12 115008196 115008214 GGCTTGGAGTAATATGGAC 57 115008154 115008172 AGTCTGGATTTGAGAGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV6-5 ENSMUSG00000076679 ENSMUST00000103488 1 1 1 60 12 115655018 115655036 CCTCTGGATTCACTTTCAG 57 115654976 115654994 CCATTCTCTGTAGAGTGGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S12 ENSMUSG00000076728 ENSMUST00000103537 2 1 1 60 12 116831499 116831517 ATATACACTGGGTGAAGCA 57 116831457 116831477 GGATAAATCCATCCAATCCAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRAV4D-4 ENSMUSG00000076816 ENSMUST00000103627 1 1 1 60 14 53922094 53922113 TCAATCTGTTCTACTTGGCT 58 53922135 53922154 TCAAATGCTGACTTTAGCCT 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Pou3f1 ENSMUSG00000078236 ENSMUST00000105033 3 1 1 61 4 124337607 124337625 TTGTATGCCCGACTAAACC 59 124337649 124337668 AGATGGGTCAGAAATTAGGA 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Mrpl48-ps ENSMUSG00000078644 ENSMUST00000102807 1 1 1 60 4 88238237 88238256 GTGGTGATAAGCTACTGGTC 59 88238196 88238214 GGTTATGAGTTTGAGGCAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Tm2d3 ENSMUSG00000078681 ENSMUST00000065574,ENSMUST00000107495,ENSMUST00000032726 1 3 3 80 7 72840145 72840163 AATGTCTCCTGCACTTACG 59 72840207 72842593 GAGGTCTTGATCGACACAG 59 NA Mus musculus 50 A2BE20_MOUSE ENSMUSG00000078896 ENSMUST00000109043 2 1 3 60 2 175295572 175295590 CTCTACTGGGTGTTGTGAG 59 175295613 175303841 AACTGTAACCATGTTTGGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Etohi1 ENSMUSG00000078898 ENSMUST00000099015,ENSMUST00000109047 1 2 3 80 2 175206008 175206028 GATGCTTCTCAGAAGAGTCTC 59 175206068 175206294 TTCCCAACTGTAACCTATAGC 59 NA Nonspecific Mus musculus 50 Cpt1b ENSMUSG00000078937 ENSMUST00000109313,ENSMUST00000052315 2 2 2 80 15 89251176 89251194 CTACAACCCTGACGATGAG 59 89250616 89251133 TCAAACCACCTGTTATAGCA 58 NA Mus musculus 50 LOC100041050 ENSMUSG00000079156 ENSMUST00000110967 2 1 1 108 5 138506948 138506966 AAAGAGACATCTCACCTGG 58 138507038 138507471 ATCCTCTGGTGATCTTCTG 58 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 Gpr45 ENSMUSG00000079587 ENSMUST00000055874 2 1 1 99 1 43010424 43010442 ACCACCATTTCTGATCGTC 59 43010503 43010523 CGATGTAAAGGAAATGGTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm467 ENSMUSG00000079679 ENSMUST00000054530 1 1 1 80 6 13143130 13143148 AGACATCATTGTGGAACCT 58 13142632 13143087 TTGACTTTGATCTGGATGCT 59 NA Mus musculus 50 NM_001085528.1 ENSMUSG00000080132 ENSMUST00000105562 1 1 1 60 4 88401213 88401231 TATCTGAAGGCAAAGGCAC 59 88401255 88401273 CTTGCAATTGGACTCTGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 AA881470 ENSMUSG00000000148 ENSMUST00000110807,ENSMUST00000041588,ENSMUST00000110806,ENSMUST00000100505 3 4 5 244 5 141186232 141187463 TTTGAGTACCTTCAGCAGG 59 141188521 141188540 ATATGTACTAGGAGCTGGCT 59 NA DesignRelaxed Mus musculus 50 Alox12 ENSMUSG00000000320 ENSMUST00000000329 2 1 2 80 11 70060557 70060771 ATTTGATCAGGTAGTGAGCA 58 70060496 70060514 GAGTGGTAAGTCAGCTGAG 59 NA Mus musculus 50 Myo18a ENSMUSG00000000631 ENSMUST00000108375,ENSMUST00000102488,ENSMUST00000108376,ENSMUST00000000645,ENSMUST00000092887,ENSMUST00000092886,ENSMUST00000100794 2 7 10 95 11 77631771 77632091 TTCAGAGAAGGTGATGCAC 59 77632150 77632168 AACATCGCCCTATATGCAG 59 NA Mus musculus 50 Dnajc5 ENSMUSG00000000826 ENSMUST00000072334,ENSMUST00000108798,ENSMUST00000116365,ENSMUST00000108797,ENSMUST00000108796 2 5 5 82 2 181281182 181282051 AAAGTCCTATCGGAAGCTG 59 181282096 181282115 TCTCCTTAAACTTGTCTGCA 58 NA Mus musculus 50 Clpb ENSMUSG00000001829 ENSMUST00000106999,ENSMUST00000001884 1 2 3 172 7 108835831 108835849 CAAGACACAAACTTGGCTG 59 108855092 108871229 AGTGACTAGGACTTCCAGAG 59 NA Mus musculus 50 Ltbp1 ENSMUSG00000001870 ENSMUST00000112518,ENSMUST00000001927 1 2 5 86 17 75465533 75550613 TACATCCTCAAGTTGCACC 59 75550663 75550681 AGTACTTGGGTTTGAGCAG 59 NA Mus musculus 50 Lmf1 ENSMUSG00000002279 ENSMUST00000063344,ENSMUST00000116641,ENSMUST00000115111 2 3 4 87 17 25782188 25782206 TTCTTGTGCCTTTCTTCCT 59 25782257 25791378 ATGATGAGGATCACCTGGA 59 NA Mus musculus 50 Tiam1 ENSMUSG00000002489 ENSMUST00000114124,ENSMUST00000114122,ENSMUST00000002588 1 3 4 80 16 89812179 89812198 GACTTAAACTGCCTCATGGA 59 89811829 89812138 AAGTACATCAAGCTCATCCTG 59 NA Mus musculus 50 Ccdc65 ENSMUSG00000003354 ENSMUST00000003444 3 1 3 86 15 98551143 98551161 CCTGAAGGTGAAGGATGAG 59 98551210 98551405 AGGATACCTATGGTCTCCTG 59 NA Mus musculus 50 Brd8 ENSMUSG00000003778 ENSMUST00000003876,ENSMUST00000097626 3 2 2 80 18 34767142 34767443 ATCATTGAGGACAAGGTGG 59 34767080 34767099 CTCTTCACAGAACGATAACG 58 NA Nonspecific Mus musculus 50 Abca13 ENSMUSG00000004668 ENSMUST00000042740,ENSMUST00000109684 3 2 2 80 11 9174717 9174735 TTTATACCTGCTGGGTCTG 58 9174779 9175031 ATTCTTTGTCAACAGCTGG 58 NA Mus musculus 50 Agxt2 ENSMUSG00000005269 ENSMUST00000022858 3 1 2 86 15 10311140 10311158 GATTCTCCAGTGCAAACAG 58 10311206 10317901 GATGTTAGAATGGCATTCTCG 59 NA Mus musculus 50 Uqcc ENSMUSG00000005882 ENSMUST00000109632,ENSMUST00000109636,ENSMUST00000088667 2 3 6 104 2 155735148 155736100 GTAAATGGAAGATCAAGATCGC 59 155727068 155727086 TGAATGTATCGGGCATCTG 59 NA Mus musculus 50 Rps9 ENSMUSG00000006333 ENSMUST00000006496,ENSMUST00000108623,ENSMUST00000108625 3 3 3 97 7 3656282 3656300 GAGGGTCAAGTTTACCCTG 59 3656361 3657343 GAGCATTGCCTTCAAACAG 59 NA Nonspecific Mus musculus 50 Mpl ENSMUSG00000006389 ENSMUST00000106375 1 1 3 146 4 118128359 118129289 ATAGTGTGGAAACCTGCTG 59 118127867 118127885 TCACTGTCAGAAATGGAGC 59 NA Mus musculus 50 M6pr ENSMUSG00000007458 ENSMUST00000112610,ENSMUST00000007602 1 2 2 98 6 122266105 122266123 TTCTTATACCAGCGACTGG 58 122266185 122266354 ACAACCATCAGCTACTAGG 58 NA Mus musculus 50 Cav1 ENSMUSG00000007655 ENSMUST00000115456,ENSMUST00000007799 3 2 5 178 6 17256477 17257896 GAGGGACATCTCTACACTG 58 17258037 17289123 TCAAAGTCAATCTTGACCAC 58 NA Mus musculus 50 Lnp ENSMUSG00000009207 ENSMUST00000064503,ENSMUST00000111993,ENSMUST00000102676 1 3 3 83 2 74386035 74386053 TCCAGACTCAAAGAAAGCA 58 74375549 74385903 TGACGAATCTCTTGTCCTG 59 NA Mus musculus 50 Cdh23 ENSMUSG00000012819 ENSMUST00000073242,ENSMUST00000105462 2 2 5 109 10 59845484 59845502 GTGTGATCACAGTCAAAGG 58 59842086 59845413 GATGTAGACCACAGTAGAGTC 59 NA Mus musculus 50 Dedd ENSMUSG00000013973 ENSMUST00000111300,ENSMUST00000111299,ENSMUST00000064950,ENSMUST00000097467 2 4 4 80 1 173270463 173270969 GACATGTGATATCAGGCTC 57 173271012 173271031 TTATTGGAGAAGACATTGCC 57 NA Mus musculus 50 Nit1 ENSMUSG00000013997 ENSMUST00000111289,ENSMUST00000014141,ENSMUST00000111295 1 3 3 97 1 173273948 173274202 CAGCAAGGGATCAGTAGTG 59 173273869 173273889 GCTTGGTATAGTTGCTTTCTC 59 NA Nonspecific Mus musculus 50 Steap2 ENSMUSG00000015653 ENSMUST00000015797,ENSMUST00000115425,ENSMUST00000115424,ENSMUST00000115426 2 4 4 100 5 5673691 5675854 TCAGTTTCATCCAGTCTACG 59 5673610 5673629 GTAGTACTCTTCTGCAAACG 58 NA Mus musculus 50 Stard13 ENSMUSG00000016128 ENSMUST00000110483,ENSMUST00000062015 3 2 2 85 5 151895392 151898003 GTATGAAGATTCGCAGTTCC 58 151895326 151895345 AAAGAGGTTCTACAAGGTCC 58 NA Mus musculus 50 Pls3 ENSMUSG00000016382 ENSMUST00000114058,ENSMUST00000114060 1 2 5 85 X 73044819 73045063 CAGTGAAGGATTCCAAAGC 58 73044752 73044770 AATATCTATCCGTGGCTCC 58 NA Mus musculus 50 Plxdc1 ENSMUSG00000017417 ENSMUST00000107565,ENSMUST00000017561 3 2 3 94 11 97815293 97816079 TTCGGCTACAAAGAGATCC 59 97815217 97815236 TTGAGAATCATGAAAGCGTC 58 NA Mus musculus 50 Hnf4g ENSMUSG00000017688 ENSMUST00000017832,ENSMUST00000108393,ENSMUST00000108394 2 3 3 83 3 3652888 3652907 CTCAAGATCCACTAACTGGG 59 3652953 3657066 TCTCTGGAGTTGCAATCTG 59 NA Mus musculus 50 Ppp2r5c ENSMUSG00000017843 ENSMUST00000065483,ENSMUST00000084985,ENSMUST00000109832,ENSMUST00000017987 2 4 4 80 12 111760831 111760850 GATGGTGGAGTATATCACCC 59 111760892 111782295 TTAACTGCAAACATGTGGAC 58 NA Mus musculus 50 Vezf1 ENSMUSG00000018377 ENSMUST00000018521 1 1 1 60 11 87887218 87887238 CTATACTTGCAGTGTTTGTGG 59 87888170 87888188 TACATGACAGCTTAGGTGG 58 NA DesignNoJunction Mus musculus 50 Phf23 ENSMUSG00000018572 ENSMUST00000018716 1 1 2 112 11 69811330 69811810 CTAGCAAAGAGGAAAGCGA 59 69811886 69811904 GATAGTTCGAAGGTCCGAC 59 NA Mus musculus 50 Atp6ap1 ENSMUSG00000019087 ENSMUST00000114171 2 1 3 81 X 71548909 71549074 CTCTTCATAACTTCCAGAATCC 58 71549115 71549134 TAGGAGACACATTGACATGG 59 NA Mus musculus 50 Ccl9 ENSMUSG00000019122 ENSMUST00000019266,ENSMUST00000108129 1 2 2 86 11 83389402 83389422 CTATAACTCACGGATTCAGTG 57 83388989 83389354 CTGATAAAGATGATGCCCG 58 NA Mus musculus 50 Epb4.1l2 ENSMUSG00000019978 ENSMUST00000053748,ENSMUST00000092645,ENSMUST00000092644,ENSMUST00000061084,ENSMUST00000068469,ENSMUST00000020151,ENSMUST00000053095,ENSMUST00000061367 2 8 8 82 10 25189011 25189030 GGCTGTTCACTTTCAATGTG 59 25189074 25191240 AAGGCACAAGAAGTATCTGG 59 NA Mus musculus 50 Aifm2 ENSMUSG00000020085 ENSMUST00000105456,ENSMUST00000105455,ENSMUST00000099706,ENSMUST00000067857,ENSMUST00000080099 3 5 5 96 10 61190885 61190903 CTCACAATTCATCGTGGTG 58 61190961 61195082 GATAAGAGTGACCTCCTTCTC 59 NA Mus musculus 50 Fbxw11 ENSMUSG00000020271 ENSMUST00000076383 2 1 4 94 11 32580293 32608197 ATGTCTCCAGAACACTTCAG 59 32611774 32611793 CAGATGACGTTCCATTACTG 58 NA Mus musculus 50 Theg ENSMUSG00000020317 ENSMUST00000020566 1 1 2 104 10 79048980 79048998 AACTGGCAATGTCTGAGAG 59 79048190 79048657 TACAGAAGGCCAATACAGG 58 NA Mus musculus 50 Zfp354a ENSMUSG00000020364 ENSMUST00000020628,ENSMUST00000102766 2 2 5 87 11 50873583 50873602 CATCTTCACCCATCTTTGGA 59 50873652 50874375 AATGTCAACGACACCTGAG 59 NA InUTR Mus musculus 50 1200011M11Rik ENSMUSG00000020495 ENSMUST00000020801 2 1 1 62 11 86893677 86893697 GCTCCTTTGCAGATAATACTG 58 86891620 86891638 AAATACTGGACATGGTGGT 58 NA DesignNoJunction Mus musculus 50 Grhl1 ENSMUSG00000020656 ENSMUST00000085553 1 1 2 108 12 25260950 25262889 CTATGACTACTACAAGGTCCC 58 25266196 25266214 CGTCACATTTGGTATGCTG 59 NA Mus musculus 50 Efr3b ENSMUSG00000020658 ENSMUST00000077156 3 1 2 81 12 3976767 3976785 CCCTCATAAGCATTGAGCT 59 3973665 3976723 GTCTCTATCACCTGAACAGC 59 NA Mus musculus 50 Zc3h14 ENSMUSG00000021012 ENSMUST00000066979,ENSMUST00000047981 1 2 6 95 12 99985724 99991000 CTTACGTAGATGAAGAACTTCC 58 99991056 99991074 CTAGAAACAGGGACAGGTC 58 NA Mus musculus 50 Esrrb ENSMUSG00000021255 ENSMUST00000021680,ENSMUST00000110204,ENSMUST00000116402,ENSMUST00000110207 3 4 4 80 12 87855431 87855450 AGGTACAAGAAACTCAAGGT 58 87855492 87859781 GTACATCGAATCTGAGTTGG 58 NA Mus musculus 50 2310021P13Rik ENSMUSG00000021819 ENSMUST00000022358 2 1 2 80 14 21537204 21537657 AGCTCAAGAAGATCCTAGAC 58 21537698 21537718 ATGAGTAGAAAGAACTCAGGG 58 NA Mus musculus 50 Zdhhc20 ENSMUSG00000021969 ENSMUST00000022541 1 1 2 89 14 58465892 58468992 ATTGCCCAAAGAATGAACC 58 58465821 58465839 CGAAGAACATTGCAGACAC 59 NA Mus musculus 50 Ddef1 ENSMUSG00000022377 ENSMUST00000023008,ENSMUST00000110114 2 2 3 107 15 63984481 63985414 TCTAGAAGAGACTCTCAGAGC 59 63984394 63984412 ATCACTCTTCTTCAGCAGG 58 NA Mus musculus 50 1500032L24Rik ENSMUSG00000022452 ENSMUST00000023086 3 1 1 130 15 82178372 82178390 TTTCTCTATGTCGGGACAC 58 82179286 82179304 TCATCAGTGCTTTCTCCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Col2a1 ENSMUSG00000022483 ENSMUST00000088359 3 1 5 85 15 97829155 97829717 TTAGGGCCAAAGATCATAGG 58 97828794 97828812 GTACCAGGTTCTCCATCTC 58 NA Mus musculus 50 Stxbp5l ENSMUSG00000022829 ENSMUST00000114787,ENSMUST00000114782,ENSMUST00000114780,ENSMUST00000114781,ENSMUST00000096074,ENSMUST00000114790,ENSMUST00000114789,ENSMUST00000023526,ENSMUST00000114778,ENSMUST00000114775 1 10 10 84 16 37330033 37345164 ATACGAATACTTGGGAGGC 58 37329967 37329985 TGATGAGGAATTGGAGCTG 59 NA Mus musculus 50 Brwd1 ENSMUSG00000022914 ENSMUST00000023631,ENSMUST00000113829,ENSMUST00000113827 3 3 3 110 16 96290225 96303429 GAGGAATTGGTCTTGTCCA 59 96290133 96290151 GACTCTTGAGATACTGGGC 59 NA Nonspecific Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000114001,ENSMUST00000114002,ENSMUST00000064797,ENSMUST00000113999,ENSMUST00000056482,ENSMUST00000113996,ENSMUST00000113993,ENSMUST00000116575,ENSMUST00000023678,ENSMUST00000113986 3 10 16 128 16 91840077 91841741 GTCTACCACAGAGAAAGGC 59 91841833 91841851 ACTATATCTCCTGGCTGGA 58 NA Mus musculus 50 Ccndbp1 ENSMUSG00000023572 ENSMUST00000099489,ENSMUST00000060455 3 2 3 95 2 120838689 120838708 CATTTCTGATGAGATCAGCC 58 120839747 120841877 AATTTCGCAGAACTGATCC 58 NA Mus musculus 50 Phf10 ENSMUSG00000023883 ENSMUST00000115639,ENSMUST00000024657 3 2 2 87 17 15093043 15093063 GACGAGATTTATCTCACAAGG 58 15092159 15092994 AATGCTGTTAAACCCAGTG 58 NA Mus musculus 50 Cacna1h ENSMUSG00000024112 ENSMUST00000068905 2 1 4 136 17 25569796 25569814 ATATCCTTACAGGGTTGGC 58 25569678 25569697 TACCATCTCTGAGAAGAACG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Clps ENSMUSG00000024225 ENSMUST00000025062 1 1 1 110 17 28695779 28695797 AGTGTAAGAGCAGATGCTG 59 28695367 28695385 AGTAGATCCCATAGAGGGT 57 NA DesignNoJunction Mus musculus 50 Nr3c1 ENSMUSG00000024431 ENSMUST00000115567,ENSMUST00000115571,ENSMUST00000025300 1 3 5 162 18 39588402 39588420 CAGATGTGAGTTCTCCTCC 59 39584141 39588276 TAATTGTGCTGTCCTTCCA 58 NA Mus musculus 50 Eif4ebp3 ENSMUSG00000024483 ENSMUST00000116653 3 1 6 101 18 36813910 36815271 CTCAAACACATGTAGGACCA 59 36816343 36816361 TGTGACCAACCTGATAAGC 59 NA Mus musculus 50 Htatip ENSMUSG00000024926 ENSMUST00000099970 2 1 4 92 19 5604158 5604176 CTGACAAGTACCCAACCAG 59 5603980 5604103 AGTTCATAGCTCTTGGTGTG 59 NA Mus musculus 50 Mxi1 ENSMUSG00000025025 ENSMUST00000003870,ENSMUST00000025998,ENSMUST00000111737 1 3 3 87 19 53405963 53420948 ACTGCCAACAGATCTACAC 59 53444060 53444078 GGATCAGAACTTTCAAGCG 58 NA Mus musculus 50 Hdgfrp3 ENSMUSG00000025104 ENSMUST00000107305,ENSMUST00000107306,ENSMUST00000026094 2 3 3 82 7 89038827 89044573 CCTACACGTCAAAGAAGTC 57 89038763 89038781 GTTCTCCTCTTCTTTGCAG 58 NA Mus musculus 50 Sufu ENSMUSG00000025231 ENSMUST00000111866 3 1 3 151 19 46471772 46499504 CTGGTTTACAGGAACAGAC 57 46499619 46524330 AGAAGGTGTTCTCTGACTG 58 NA Mus musculus 50 Rhot2 ENSMUSG00000025733 ENSMUST00000043897,ENSMUST00000115063,ENSMUST00000026830 2 3 3 89 17 25980890 25980908 AACTTCAGGAGGAGATCCA 59 25979351 25980057 ACTTGGTTCGGATCTTCTC 58 NA Mus musculus 50 Atp5c1 ENSMUSG00000025781 ENSMUST00000026887,ENSMUST00000114896,ENSMUST00000114897 2 3 3 94 2 9985209 9985749 AGGGCATACTTTATAGGACTC 58 9985135 9985153 AATGACTGATGCATCTCCA 58 NA Mus musculus 50 Nudt5 ENSMUSG00000025817 ENSMUST00000026927 2 1 2 86 2 5787280 5787413 GGATGGAGAATTTATGGAAGTG 58 5789141 5789159 GTAAGGTGTTGTTCTGCTC 58 NA Mus musculus 50 Myo5b ENSMUSG00000025885 ENSMUST00000074157,ENSMUST00000114883 3 2 2 122 18 74904415 74918689 GCCTATGATAGTTTCTGCCA 59 74918773 74918792 TCCAGGCAATACGAATTCTC 59 NA Mus musculus 50 Als2cr2 ENSMUSG00000026027 ENSMUST00000027185 2 1 2 81 1 59049527 59049546 TTACAGTGTTGGGATCACAG 59 59049587 59049745 TAATAGCATCTGAGTCCTATGC 59 NA Mus musculus 50 Sema4c ENSMUSG00000026121 ENSMUST00000114992,ENSMUST00000114991,ENSMUST00000027295,ENSMUST00000114990,ENSMUST00000114995 1 5 5 80 1 36610613 36610632 CTTCAGCCATACAATTCCTC 58 36610404 36610570 GAGCATGTTGATGTAGGTG 58 NA Mus musculus 50 Plcd4 ENSMUSG00000026173 ENSMUST00000113749,ENSMUST00000113748,ENSMUST00000027362 2 3 7 80 1 74608447 74608465 TCTGTGGTCATGTTATGGC 59 74608508 74608644 AACTCAGGAGAAGAAACTGC 59 NA Mus musculus 50 Fn1 ENSMUSG00000026193 ENSMUST00000055226,ENSMUST00000097700 2 2 3 84 1 71651601 71651619 GTGGAGTACGTGGTTAGTG 59 71650495 71651553 GATCAATGTTGGTCACTGC 59 NA Mus musculus 50 Pctk3 ENSMUSG00000026437 ENSMUST00000027697 1 1 2 90 1 134018082 134018100 ATTCCTGCAGAAGCTACAG 59 134016587 134018028 AAAGCCGATATCTGACAGG 59 NA Mus musculus 50 Wdr64 ENSMUSG00000026523 ENSMUST00000027807 1 1 3 80 1 177702471 177715621 ATTATCCAGAGTCCTATTGTCG 59 177715659 177715680 ACACGCTATCAGATTATATCCC 59 NA Mus musculus 50 Lamc3 ENSMUSG00000026840 ENSMUST00000113439,ENSMUST00000028187 3 2 2 105 2 31778611 31780091 CTAGTGAAGGAAGAGGCAG 59 31780160 31780178 GCAGAATGTCTAGTGGTCC 59 NA Mus musculus 50 Nola3 ENSMUSG00000027133 ENSMUST00000028553 3 1 1 135 2 112102191 112102211 AATATTACCTCAACGAGCAGG 59 112102543 112102561 TTGATGGTGATTCGGTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bcl2l11 ENSMUSG00000027381 ENSMUST00000019281,ENSMUST00000103211 3 2 6 128 2 127954490 127972836 AAGCTTCCATACGACAGTC 59 127972927 127983982 AATCATTTGCAAACACCCTC 59 NA Mus musculus 50 Dnmt3b ENSMUSG00000027478 ENSMUST00000056495,ENSMUST00000109771 3 2 10 85 2 153500772 153501471 GAAGAATTTCAGGAGCCAC 58 153501520 153501538 CCATCAAACAGAGACAGGA 58 NA Mus musculus 50 Stx16 ENSMUSG00000027522 ENSMUST00000094281 3 1 3 109 2 173902599 173902619 GGAATAATTCCATCCAAACCC 59 173902690 173916127 AGCAAGTTCATCCAGATCC 59 NA Mus musculus 50 2610036D13Rik ENSMUSG00000027650 ENSMUST00000029179,ENSMUST00000109522 3 2 2 85 2 157826413 157826431 GAGCAGTTTGTACTGAGCT 59 157822952 157826364 GACTGCACCTCTTCTTCAG 59 NA Mus musculus 50 Dnajc19 ENSMUSG00000027679 ENSMUST00000011029 3 1 2 109 3 33977760 33978138 ATTAGGTGTAAGCCCTACTG 58 33957010 33957028 GTTTCAGACCTTCTTCCAC 57 NA Mus musculus 50 Stxbp3a ENSMUSG00000027882 ENSMUST00000102621 2 1 4 91 3 108602198 108602216 CTGAGAAAGGATCGGTCTG 59 108600368 108602146 CTATTATCAATGGCATCCTCCA 59 NA Mus musculus 50 Gstm4 ENSMUSG00000027890 ENSMUST00000116285,ENSMUST00000029489,ENSMUST00000106670 3 3 3 80 3 107845100 107845118 TTATATTCGAACCCACGTG 57 107844228 107845056 AGATCCTCTTCAGTACCTC 57 NA Mus musculus 50 Pigo ENSMUSG00000028454 ENSMUST00000067481,ENSMUST00000098109,ENSMUST00000107965 1 3 3 80 4 43032133 43032151 CTCCGAATCACTTCAATGC 58 43031078 43032089 CACAAGCTAGAATCTGAGC 57 NA Mus musculus 50 Snapc3 ENSMUSG00000028483 ENSMUST00000107225 2 1 3 82 4 83096127 83098950 TCACAGACATAAGATGGGT 57 83098995 83099014 CATTCTGAAGCAAACATCAC 57 NA Mus musculus 50 Psip1 ENSMUSG00000028484 ENSMUST00000107216 3 1 4 157 4 83110834 83110852 GAAGACGATCAAGAGGGTG 59 83108064 83109502 TCATTGTAAGCTTGGTGCT 59 NA Mus musculus 50 Sgip1 ENSMUSG00000028524 ENSMUST00000106882,ENSMUST00000066824,ENSMUST00000106874 1 3 9 165 4 102607168 102607186 CTCGTTTGGTTTGACAGAG 58 102628808 102634990 TAACAATGCACTTGCTTGG 58 NA Mus musculus 50 Pde4b ENSMUSG00000028525 ENSMUST00000106911,ENSMUST00000030251,ENSMUST00000106908,ENSMUST00000106904,ENSMUST00000097950,ENSMUST00000097949 1 6 9 91 4 102275298 102275316 GAGACAAAGAACGGGAGAG 59 102275371 102277593 GTCAATGAAACCAACCTGG 58 NA Mus musculus 50 Cc2d1b ENSMUSG00000028582 ENSMUST00000030320 2 1 2 85 4 108299716 108299907 GTTCCTCCAGGATTTCCTC 59 108299956 108299974 GCAGTTGCTAAAGTTGCTG 59 NA Mus musculus 50 Mutyh ENSMUSG00000028687 ENSMUST00000102699,ENSMUST00000030449 1 2 3 144 4 116488619 116488640 CTATTATACTCGATGGATGCAG 58 116489103 116489196 CTCTACCACCTTCCTAGCT 59 NA DesignRelaxed Mus musculus 50 Zcchc17 ENSMUSG00000028772 ENSMUST00000105995 1 1 2 90 4 130026561 130031392 CAAGGAGAGGTTGCTATGG 59 130015805 130015823 ACATGTGAGTTCGATGGAC 59 NA Mus musculus 50 D5Ertd579e ENSMUSG00000029190 ENSMUST00000031091 1 1 3 80 5 36963069 36966832 TAAAGTCTGAAGCTGAGCTC 59 36962346 36962367 AGAGCTCTTCTACTAAAGTCTC 58 NA Mus musculus 50 Epha5 ENSMUSG00000029245 ENSMUST00000113406,ENSMUST00000113411,ENSMUST00000113401 3 3 8 88 5 84579421 84579439 CAAATTCGAGCACGTACAG 59 84571390 84579370 TCATTAGATGCTGCAAACAC 58 NA Mus musculus 50 Crybb1 ENSMUSG00000029343 ENSMUST00000031286,ENSMUST00000112375 1 2 3 81 5 112692654 112696343 CATCAGGATGGATTCCCAG 59 112696388 112696406 CTCTTGGATCTCCATGGTG 59 NA Mus musculus 50 Tmem116 ENSMUSG00000029452 ENSMUST00000111795,ENSMUST00000094357,ENSMUST00000111794,ENSMUST00000060004,ENSMUST00000078094,ENSMUST00000031405 2 6 6 92 5 121941140 121941158 AATACATCTGTCTGCAGCA 58 121941212 121943648 GAGTAAGACCATGATGGTGAG 59 NA Mus musculus 50 Osbpl3 ENSMUSG00000029822 ENSMUST00000114469,ENSMUST00000071728,ENSMUST00000114468 3 3 4 130 6 50270071 50270089 GAAACGTACGAATGCATCC 59 50259378 50262636 TTCCATCTCACATCTTGCC 59 NA Nonspecific Mus musculus 50 Lrp6 ENSMUSG00000030201 ENSMUST00000032322,ENSMUST00000111950 1 2 2 80 6 134407783 134409264 AGAAGAACTGTGAAGTGCT 58 134407721 134407740 CACATTTCTTGTGCTTTCCA 59 NA Mus musculus 50 Plekhb1 ENSMUSG00000030701 ENSMUST00000107046,ENSMUST00000079176,ENSMUST00000107047,ENSMUST00000107045,ENSMUST00000116288,ENSMUST00000116287,ENSMUST00000107044 1 7 7 82 7 107802200 107803126 GATGATGCCATAGCATGGA 59 107794152 107794170 TAGTAGTCCTGATACGGGC 59 NA Mus musculus 50 Ush1c ENSMUSG00000030838 ENSMUST00000107685,ENSMUST00000078680 1 2 4 84 7 53474721 53474739 AAAGGAGCAGCTCATTCTG 59 53471436 53474674 CACTCCCTGATCATACTTGG 59 NA Mus musculus 50 Oraov1 ENSMUSG00000031072 ENSMUST00000093964 3 1 2 85 7 152103578 152114840 AAAGACAGTACCACTCTGC 59 152114889 152114907 CTTATCGTGTCCAGGTAGG 58 NA Nonspecific Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112404 2 1 10 115 X 156876231 156899278 TTACATCCCTGAAAGATGC 57 156903510 156903529 ATTTCTCTGGGATTTGACTC 57 NA Mus musculus 50 Hccs ENSMUSG00000031352 ENSMUST00000112115,ENSMUST00000033717 1 2 2 84 X 165751598 165753543 TTCATGCTCATGAGTGTCC 59 165751532 165751550 CGAATTCTTGCTCTTGGTG 59 NA Mus musculus 50 Amelx ENSMUSG00000031354 ENSMUST00000112119,ENSMUST00000062820 1 2 5 80 X 165620453 165620567 GACTGCATTAGTGCTTACC 58 165620122 165620140 ATGGGTTCGTAACCATAGG 58 NA Mus musculus 50 Ctps2 ENSMUSG00000031360 ENSMUST00000101093,ENSMUST00000112302 3 2 7 104 X 159413117 159413135 AATTGACATGCCTGAACAC 58 159413201 159449003 TATGGATGACTCAGTATGGAG 58 NA Mus musculus 50 Ctps2 ENSMUSG00000031360 ENSMUST00000112303,ENSMUST00000033727,ENSMUST00000112301,ENSMUST00000112300 3 4 7 81 X 159413147 159413166 TTTGGGAGGAACAATGAGAC 59 159413208 159434653 GTCACCATAAAGCTTCTTCAG 58 NA Mus musculus 50 Hcfc1 ENSMUSG00000031386 ENSMUST00000114372 3 1 2 104 X 71194310 71194330 AGTGCTATCACTACAAGTGTG 59 71193743 71194244 CAATGATGAGATGTTCGGC 58 NA Mus musculus 50 Edg4 ENSMUSG00000031861 ENSMUST00000034325,ENSMUST00000066018 3 2 2 117 8 72348176 72348194 ACGGTTGTCATCATTCTGG 59 72350270 72350288 GGAAGTACTTCTCCACAGC 59 NA DesignNoJunction Mus musculus 50 Rdx ENSMUSG00000032050 ENSMUST00000000590 3 1 2 198 9 51877825 51877843 GAAGTACAGCAGATGAAGG 57 51881380 51889132 CTTCTAGTTCTTTCTGGGC 57 NA Mus musculus 50 Robo4 ENSMUSG00000032125 ENSMUST00000115048,ENSMUST00000102895,ENSMUST00000063237,ENSMUST00000115046 2 4 4 60 9 37213625 37213643 GTGTATCTACAGACGACGC 59 37213666 37213790 GGTGTATCTGTACAGACCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113705,ENSMUST00000113695,ENSMUST00000034928,ENSMUST00000113690,ENSMUST00000113707,ENSMUST00000113693,ENSMUST00000113686,ENSMUST00000113685,ENSMUST00000113687,ENSMUST00000030185 3 10 16 120 9 66879313 66879767 GGCTGAGAAGTACTCTCAG 58 66878858 66878879 CTCCAATTTGGTTACTGATCTC 58 NA Mus musculus 50 Sh3px3 ENSMUSG00000032733 ENSMUST00000050916 1 1 1 60 9 56774532 56774552 TGAGAACAAGGAGGAAATCAG 59 56774492 56774511 GGTCTCACTGAAGATAACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc85a ENSMUSG00000032878 ENSMUST00000093253 2 1 4 94 11 28288943 28296061 GGTACATTCTCTTAAGGTTGTG 58 28288870 28288889 CTTTGTACTGGTTTCCTGAC 58 NA Mus musculus 50 Ogfod1 ENSMUSG00000033009 ENSMUST00000109556 3 1 2 88 8 96579231 96579440 TATCCTTTCACCAGGTGTC 58 96579492 96579510 CCTGGTTAATGAAGGACCA 58 NA Nonspecific Mus musculus 50 Igf2bp2 ENSMUSG00000033581 ENSMUST00000100052,ENSMUST00000115379 1 2 3 114 16 22089168 22161321 AAGGAGCAGAAGAATCCAG 58 22084050 22087608 ATCTGTGTTGACTTGCTCC 59 NA Mus musculus 50 Farp2 ENSMUSG00000034066 ENSMUST00000112909,ENSMUST00000041983 3 2 2 80 1 95506618 95506636 CTACAGAAATTGACGGAGC 58 95506680 95508983 CTCACGGATAAACTCCCTC 59 NA Mus musculus 50 Rasl10a ENSMUSG00000034209 ENSMUST00000037218 1 1 1 183 11 4959523 4959541 TATGTTAAAGCCCTGAGGC 59 4959928 4959946 TGTATTTGGCTGAGCACTC 59 NA DesignNoJunction Mus musculus 50 Tsen34 ENSMUSG00000035585 ENSMUST00000108630,ENSMUST00000108629,ENSMUST00000108627 1 3 4 68 7 3646782 3646800 GTGAGACCAGTGATGATGG 59 3646955 3646974 ATGAAGAATCTAGGGATGGG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Rsf1 ENSMUSG00000035623 ENSMUST00000042399,ENSMUST00000107153 1 2 2 80 7 104829290 104829309 AGAAGAAGTACTCCGATGAC 58 104829350 104830226 CATCGCTAAAGTCACTTTCAG 59 NA Mus musculus 50 1100001E04Rik ENSMUSG00000036198 ENSMUST00000114904,ENSMUST00000042444 1 2 2 83 X 46849033 46849291 AGAAACATGGCTTAAGCTC 57 46849618 46849636 TGTCAAATAACTCACGGAG 57 NA Mus musculus 50 Zfp280c ENSMUSG00000036916 ENSMUST00000072292,ENSMUST00000088898,ENSMUST00000076635 1 3 4 90 X 45896821 45896839 ATACTTCTGGCTTAGACCG 58 45896606 45896768 GCTCTTTCGGTAACATTCTC 58 NA Mus musculus 50 Rab8b ENSMUSG00000036943 ENSMUST00000041139,ENSMUST00000113722 2 2 2 149 9 66767317 66767335 ACCTTTATCTCCACCATCG 58 66702544 66708653 CATAATTCCCATGGCTCCT 59 NA Mus musculus 50 Paip2 ENSMUSG00000037058 ENSMUST00000115737,ENSMUST00000115736,ENSMUST00000041314,ENSMUST00000115735,ENSMUST00000115734 3 5 5 87 18 35773085 35773105 ACTATGGACCAAATCCAAGAC 59 35773154 35775868 TCAGATTGCTCTTGACCAC 59 NA Mus musculus 50 Snf1lk2 ENSMUSG00000037112 ENSMUST00000041375 2 1 2 80 9 50723756 50725126 GTCAGAAGATTGTGAACACC 58 50723695 50723714 TCCTTGATTTGAGCTATGCT 59 NA Mus musculus 50 Ndufc1 ENSMUSG00000037152 ENSMUST00000038108 2 1 1 187 3 51212139 51212157 GAAGTTCTATGTCCGGGAG 59 51209522 51209541 GATCATCACATGAAGCTGAC 58 NA DesignNoJunction, InUTR Mus musculus 50 Fgf2 ENSMUSG00000037225 ENSMUST00000038885,ENSMUST00000108120,ENSMUST00000091203 3 3 3 113 3 37295180 37295198 TATGAAGGAAGATGGACGG 58 37303598 37303616 CTGGAGTATTTCCGTGACC 59 NA DesignNoJunction Mus musculus 50 4932438A13Rik ENSMUSG00000037270 ENSMUST00000039493 2 1 3 94 3 36921374 36921392 TAACCTTCAACATCCAGGA 57 36921944 36925020 CTCTGGAAACTGAAAGTACC 57 NA Mus musculus 50 Trmt6 ENSMUSG00000037376 ENSMUST00000039554,ENSMUST00000110126 1 2 2 80 2 132633991 132634009 GGAGACAAGAAGAGCAGAG 59 132632725 132633947 CCACAATCAAACCATCTGC 59 NA Mus musculus 50 Rcor3 ENSMUSG00000037395 ENSMUST00000073279,ENSMUST00000110849 3 2 2 84 1 193949801 193949819 AGTGGAAGACAAAGTCCTG 59 193948237 193949755 CTTATCTGGAAGCATTTGCTG 59 NA Mus musculus 50 Ccdc50 ENSMUSG00000038127 ENSMUST00000039443,ENSMUST00000100026 1 2 3 89 16 27435728 27435747 GAAATTGCCAGGAAATTGCA 59 27436489 27436592 AGCAATTTCCTCATCCTGG 59 NA Mus musculus 50 Rbbp7 ENSMUSG00000038344 ENSMUST00000041370,ENSMUST00000112316,ENSMUST00000112314,ENSMUST00000112315 2 4 4 205 X 159235738 159245432 GAAATATGCTGATCTCCTGGA 59 159228720 159228738 CCTGCTGCATATTCTCCTC 59 NA DesignRelaxed Mus musculus 50 Tmco3 ENSMUSG00000038497 ENSMUST00000084058 3 1 2 97 8 13296021 13296039 GCTGTGTACAGCAATAGGT 59 13296099 13296617 CCGTGACCTCCTTAATACTG 59 NA Mus musculus 50 Dcun1d2 ENSMUSG00000038506 ENSMUST00000110838 1 1 4 96 8 13271656 13271674 CAAGAGCTTAAGGACCCAG 59 13259032 13271596 TTTGTGATGCTCCTAAGCC 59 NA Mus musculus 50 Gabpb2 ENSMUSG00000038766 ENSMUST00000107209,ENSMUST00000098873,ENSMUST00000070774 1 3 5 80 3 94994528 94994546 ACATCCAAACATCACTCCC 59 94993198 94994485 CAGTTAGAACTTGCTGTCCA 59 NA Mus musculus 50 Ephx1 ENSMUSG00000038776 ENSMUST00000111068,ENSMUST00000036928 3 2 2 90 1 182930028 182931941 GAGGAGATCAAGGACTTGC 59 182929956 182929974 TGGAGTTGAAGCCATAGTG 59 NA Mus musculus 50 Tgfb2 ENSMUSG00000039239 ENSMUST00000045288,ENSMUST00000085692 2 2 2 80 1 188452905 188454497 CTGCTTTAGAAATGTGCAGG 59 188452844 188452864 ATCCATTTCCATCCAAGATCC 59 NA Mus musculus 50 Lgi2 ENSMUSG00000039252 ENSMUST00000113928 2 1 2 80 5 52945808 52946916 ACTCCCTCATTGAACTAGAC 58 52945747 52945766 TCTTCAGCCATAGATACAGC 58 NA Mus musculus 50 Igfbp2 ENSMUSG00000039323 ENSMUST00000047328,ENSMUST00000080287 3 2 2 82 1 72896212 72896230 CCTGGAACATCTCTACTCC 58 72896276 72898587 TCAGAGACATCTTGCACTG 59 NA Mus musculus 50 Wdr34 ENSMUSG00000039715 ENSMUST00000113711,ENSMUST00000045622 1 2 2 80 2 29887642 29887660 CAAGTACCTGTTTGCTGTG 58 29887480 29887598 AGTTGTACATCACCTTCCC 58 NA Mus musculus 50 Tera ENSMUSG00000039985 ENSMUST00000081956,ENSMUST00000054080,ENSMUST00000111562 1 3 3 80 6 148874682 148877046 GAATTTAAACGCCACAACTC 57 148874621 148874639 CTGGTTACTGTAGCATGGA 58 NA Nonspecific Mus musculus 50 Gm885 ENSMUSG00000040528 ENSMUST00000106794 1 1 3 147 11 106622607 106625179 AAAGGTAGCAGGAAAGAAGAC 59 106626561 106626579 CTCCTTGAAGACTGGAGTG 59 NA Mus musculus 50 Ckap5 ENSMUSG00000040549 ENSMUST00000046769 1 1 4 100 2 91456605 91459914 CCTACTTCAACAGGTAACAC 57 91459977 91459995 TTTGTGTTGTCAAGACCAC 58 NA Mus musculus 50 Cyyr1 ENSMUSG00000041134 ENSMUST00000114174,ENSMUST00000040094 2 2 2 119 16 85545126 85545144 AAGAGTGCCACTCTTACTG 58 85465896 85465914 TGAACACGATTCCAAACAC 58 NA DesignNoJunction, InUTR Mus musculus 50 Phf8 ENSMUSG00000041229 ENSMUST00000112666,ENSMUST00000112670,ENSMUST00000046950,ENSMUST00000046962,ENSMUST00000112668,ENSMUST00000112662 1 6 6 80 X 148002278 148004894 AAGAAAGAAGCTTTGCCAG 58 148004936 148004956 CCTAGCCAGATCTTTAATGAG 57 NA Mus musculus 50 Rnf10 ENSMUSG00000041740 ENSMUST00000100842 1 1 4 114 5 115710312 115722273 CAAGAGTGATGGAAAGAACTC 58 115710218 115710236 TTTCTGTGAATTGGAGCGA 59 NA Nonspecific Mus musculus 50 Mettl8 ENSMUSG00000041975 ENSMUST00000112186,ENSMUST00000064905 1 2 4 132 2 70819961 70819979 AATACAGCAAAGGACCTGG 59 70814180 70818437 GATCCTGGAATGTTCTGCA 59 NA Nonspecific Mus musculus 50 Zfp451 ENSMUSG00000042197 ENSMUST00000044455 1 1 3 144 1 33860449 33862192 CACAGTGATAGAATGCCTG 57 33860323 33860341 AAACTATCCTTTGTGGGCT 58 NA Mus musculus 50 Pbrm1 ENSMUSG00000042323 ENSMUST00000022471,ENSMUST00000022474 3 2 11 143 14 31920480 31930203 GAAAGCAGAATATGAAGGTGTG 59 31930423 31930441 TGAGGACCAGGATATGGAG 59 NA Nonspecific Mus musculus 50 Flad1 ENSMUSG00000042642 ENSMUST00000050398,ENSMUST00000107426,ENSMUST00000107429 1 3 3 80 3 89209821 89209839 GTACATTCGTAGCATCTCG 57 89209675 89209779 AACACCTGGAGATTATACCTC 58 NA Mus musculus 50 Gpr153 ENSMUSG00000042804 ENSMUST00000105650,ENSMUST00000105651,ENSMUST00000055754 1 3 3 80 4 151656057 151656488 TTCTGACAATGAGACCAGTC 59 151656528 151656549 CCTCCATAGCTATAGTCAAGAG 58 NA Mus musculus 50 Disc1 ENSMUSG00000043051 ENSMUST00000074562,ENSMUST00000098311 1 2 3 132 8 127672348 127672366 CAGAGAACTCACTGCTCAG 59 127679003 127688903 GAAGCAGCTTCCTGATAGG 59 NA Mus musculus 50 Gprasp1 ENSMUSG00000043384 ENSMUST00000113147 1 1 5 110 X 132278144 132279046 AATGTGATAGGTTTGCCAG 57 132283200 132283218 CTGGTATTCTAGGCTAGGG 57 NA InUTR Mus musculus 50 Setx ENSMUSG00000043535 ENSMUST00000061578,ENSMUST00000049199 3 2 3 105 2 28999486 28999504 GGGTCAACTTATTGACCCT 58 28999572 28999707 TAACTTGGTCCTTATGGAGC 59 NA Mus musculus 50 Ubxd3 ENSMUSG00000043621 ENSMUST00000105810,ENSMUST00000068172 1 2 4 251 4 138291918 138291936 CTTAAGCTTGTGGTAGCAG 58 138277270 138277288 TATGGCCATTGCTTCTCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Smtnl2 ENSMUSG00000045667 ENSMUST00000108500,ENSMUST00000050226,ENSMUST00000054338 3 3 3 69 11 72213859 72213878 AAACAGATCCTGCTAGAGTG 59 72213506 72213524 AGAAATTCTGCAGGTCCAC 59 NA DesignNoJunction Mus musculus 50 4930526D03Rik ENSMUSG00000045794 ENSMUST00000052416 3 1 1 79 2 181431722 181431740 AAAGATCCCTGATCCTCTG 58 181431586 181431604 AGATGTTGCCATCTACCTC 58 NA DesignNoJunction Mus musculus 50 6330416G13Rik ENSMUSG00000045917 ENSMUST00000077709,ENSMUST00000080336,ENSMUST00000082379 3 3 3 159 4 63231096 63231114 TTGTGCTGGTCTTTGAGAG 59 63238943 63240983 AAGTAGACAAACCAGAGCTG 59 NA Mus musculus 50 Yipf6 ENSMUSG00000047694 ENSMUST00000113811,ENSMUST00000054697 2 2 2 84 X 96135508 96135526 TCCAAGGAAGAGTAATGCA 58 96136159 96138126 CTGTAACATCAATGCAAGTG 57 NA Mus musculus 50 BC051628 ENSMUSG00000047841 ENSMUST00000050026 3 1 2 133 2 180956963 180956981 TATCAAGAGGGCAGAAAGC 59 180957274 180957292 TCTTGTTCTAGAGTCCAGC 58 NA DesignNoJunction, InUTR Mus musculus 50 NM_177013.3 ENSMUSG00000048022 ENSMUST00000050249 2 1 1 62 6 24904926 24904945 GGTCTTTCTTCATGTACGGA 59 24904883 24904901 AGTGAAGGTGGAAGTAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 1700014N06Rik ENSMUSG00000048155 ENSMUST00000059808 2 1 1 61 X 133462411 133462429 AAAGAATTGCATCCGAAGC 59 133462451 133462472 GGAGTTGATAGTAGAGTTTCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Selplg ENSMUSG00000048163 ENSMUST00000063167,ENSMUST00000100874,ENSMUST00000072194 2 3 3 60 5 114269407 114269425 GTCCACAGAGTCTAACGAG 59 114269365 114269383 GTCAGGTAAGTGAGTCACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxo10 ENSMUSG00000048232 ENSMUST00000052236 2 1 1 82 4 45064476 45064496 GCTGGTAACAACATTTACCAC 59 45061438 45064433 ATCTGGTTACACAGGATGAG 58 NA Mus musculus 50 Syngr2 ENSMUSG00000048277 ENSMUST00000026649 1 1 1 74 11 117673967 117673985 CACTGACCGAAAGTACCTG 59 117674372 117674390 AAACCAACAAACCACAGGA 59 NA DesignNoJunction Mus musculus 50 Gm766 ENSMUSG00000048473 ENSMUST00000087502 1 1 1 190 6 142746476 142750220 CAGTGCAAGATTATCTACATCG 59 142743873 142743891 AATAAGAACATGGCCAGGT 58 NA Mus musculus 50 Fbxl13 ENSMUSG00000048520 ENSMUST00000051358,ENSMUST00000115235 3 2 2 83 5 21006378 21027942 CTCATCTCAAATGAGGGCA 59 21006313 21006332 AGTGATGTTGACACAGTCAG 59 NA Mus musculus 50 Trappc1 ENSMUSG00000049299 ENSMUST00000108662 1 1 4 80 11 69137898 69137917 AGTACAAGCTGATGTATGGA 58 69137959 69138366 GTTTGTAACGGATGTCTAGC 58 NA Mus musculus 50 Zfp2 ENSMUSG00000049321 ENSMUST00000116378,ENSMUST00000077686 1 2 5 97 11 50724024 50724223 CATATGGAATACACAGGGCA 59 50723946 50723964 ATGCAACCTGGGAATTCTC 59 NA InUTR Mus musculus 50 Omg ENSMUSG00000049612 ENSMUST00000108247,ENSMUST00000056559 1 2 2 60 11 79315624 79315642 GGTAACTCAACCCAAAGTG 58 79315582 79315601 AAATGTGGTTTCCTTTCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mafg ENSMUSG00000051510 ENSMUST00000058162,ENSMUST00000106182,ENSMUST00000106181,ENSMUST00000106180 2 4 4 136 11 120491138 120491157 CCAATAAAGGAAACAAGGCC 59 120490940 120490958 GATCTCTTCCTTGGAGAGG 58 NA DesignNoJunction Mus musculus 50 Bre ENSMUSG00000052139 ENSMUST00000114514,ENSMUST00000080598 2 2 7 60 5 32004305 32004323 GACTGGATGCTACAAACTG 58 32004347 32033354 GTCAATGATGTACAGCCAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Bre ENSMUSG00000052139 ENSMUST00000080598,ENSMUST00000063813,ENSMUST00000071531,ENSMUST00000114507,ENSMUST00000078891,ENSMUST00000114511 2 6 7 105 5 32359943 32359961 CACTTTACCAACAGTGGAC 58 32360029 32386964 TGAAATAAGCCTTTGCTCTC 58 NA Mus musculus 50 Bre ENSMUSG00000052139 ENSMUST00000080598,ENSMUST00000063813,ENSMUST00000071531,ENSMUST00000114507,ENSMUST00000078891,ENSMUST00000114511 2 6 7 105 5 32359943 32359961 CACTTTACCAACAGTGGAC 58 32360029 32386964 TGAAATAAGCCTTTGCTCTC 58 NA InUTR Mus musculus 50 Lrrc33 ENSMUSG00000052384 ENSMUST00000099991,ENSMUST00000115163 1 2 3 156 16 32147685 32147703 TGATTGTGGAATGGAGGAG 58 32145000 32145018 TTAGCATCCAGAATGAGCA 58 NA DesignNoJunction Mus musculus 50 4930473A06Rik ENSMUSG00000052407 ENSMUST00000053414,ENSMUST00000055626 2 2 3 80 4 83342327 83388837 GAGAAGCTGTTAAGAGTCTC 57 83388880 83388898 GATGTCTATTGAGCTGACG 57 NA Mus musculus 50 Glis3 ENSMUSG00000052942 ENSMUST00000065113,ENSMUST00000112612 2 2 2 81 19 28614743 28614761 AAGCAGATCAGTCCTAGCT 59 28606466 28614700 AAATAACGGACCTGGTATCTG 59 NA Mus musculus 50 Umodl1 ENSMUSG00000054134 ENSMUST00000066554,ENSMUST00000087861,ENSMUST00000066981,ENSMUST00000114555 3 4 4 85 17 31110746 31117300 ACAGATGAAGATTGCCCTC 59 31117348 31117367 GAATTCAAACTCCAGGACAC 58 NA Mus musculus 50 Klhl5 ENSMUSG00000054920 ENSMUST00000101192,ENSMUST00000031089,ENSMUST00000101191,ENSMUST00000031085 2 4 4 118 5 65535890 65535908 TTCTTGATGAAGCAGCTCC 59 65535989 65539841 TCCATGAAATGTTCCATCGT 59 NA Mus musculus 50 Sfrs11 ENSMUSG00000055436 ENSMUST00000089922 3 1 5 60 3 157689704 157689722 GACAGAGCTTTGATAGTCG 57 157687699 157687717 CTGCTGCTTTGATAGAACC 58 NA DesignNoJunction Mus musculus 50 Gpc3 ENSMUSG00000055653 ENSMUST00000069360,ENSMUST00000114857 2 2 2 90 X 49936032 49936050 GAACATGGAACAACTGCTC 59 49782298 49935978 AATTTCAAAGGCCTCTTGG 58 NA Mus musculus 50 Nrf1 ENSMUSG00000058440 ENSMUST00000115212,ENSMUST00000115211,ENSMUST00000115206,ENSMUST00000115209,ENSMUST00000115200,ENSMUST00000115199,ENSMUST00000069808,ENSMUST00000069831,ENSMUST00000004761 2 9 10 63 6 30066240 30066258 CAGACCGTAGTACAGACCT 59 30066285 30067065 CTGTACCAACCTGGATGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Egln2 ENSMUSG00000058709 ENSMUST00000080058,ENSMUST00000108382 2 2 2 60 7 27944226 27944556 CAAGTATCAGCTAGCATCG 57 27944184 27944203 TGTAGTTGGCTGTGATACTG 59 NA DesignRelaxed Mus musculus 50 Kcnt1 ENSMUSG00000058740 ENSMUST00000114176 1 1 5 198 2 25766869 25771310 TGGCTATGATGAGATGAACG 59 25771601 25771619 CCTGGTCTCAGGATTACAG 58 NA Mus musculus 50 Zc3h4 ENSMUSG00000059273 ENSMUST00000098791 1 1 4 80 7 17018362 17019378 AATGAGGAAGGTGACACTG 59 17019422 17019440 GGTCTTCAGGATGGATGTG 59 NA Mus musculus 50 Kng2 ENSMUSG00000060459 ENSMUST00000115349 3 1 3 131 16 22997119 22997137 AACAAAGTCATCCCGACTG 59 22986133 22988327 TAGGAGCCTAGTTGTTCCT 59 NA Mus musculus 50 Slc9a6 ENSMUSG00000060681 ENSMUST00000077741 3 1 3 84 X 53886693 53886714 ATCTATTGGAATCTTCCTTGGG 59 53886756 53887971 CTTTGTCACTAAAGCTGTTACC 59 NA Mus musculus 50 Lsamp ENSMUSG00000061080 ENSMUST00000099761,ENSMUST00000078873 3 2 2 80 16 42144132 42144150 CTTCCCTCAAATGTGAAGC 58 42144194 42144678 TTGCACTGTTTATCCTGGT 59 NA Mus musculus 50 Psg20 ENSMUSG00000063305 ENSMUST00000108482,ENSMUST00000076677 1 2 3 60 7 19269940 19269958 ATTGCACTGCATTTAGTGG 58 19269898 19269916 CTCTATCACTGTGCTCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rpl27 ENSMUSG00000063316 ENSMUST00000077856,ENSMUST00000085947,ENSMUST00000107249 1 3 3 123 11 101304983 101306551 AGGTACTCTGTGGATATCCC 59 101306637 101306763 CTGTCTTGTATCGCTCCTC 59 NA Nonspecific Mus musculus 50 Cyp4a10 ENSMUSG00000066072 ENSMUST00000058785,ENSMUST00000094886 2 2 2 128 4 115192263 115192282 AAATTGTGTCGTGCATAGAG 58 115192373 115192868 TAGCCTTTGGATCTGATCG 58 NA Mus musculus 50 Hdac8 ENSMUSG00000067567 ENSMUST00000087916 1 1 2 97 X 99600938 99600958 CTTTAATATGACACCAGTGGG 58 99598004 99600879 CAAGGTTATAGCCTCCTCC 58 NA Mus musculus 50 Rya3 ENSMUSG00000068008 ENSMUST00000088950,ENSMUST00000109760 3 2 2 87 2 153751585 153751603 CTCTATCTCTTCAGCACCG 59 153751654 153753034 CATTCCTGGGAACCATCTC 59 NA Mus musculus 50 Efcab1 ENSMUSG00000068617 ENSMUST00000090277 1 1 3 82 16 14920909 14920928 CTATGAGAAGGCTGTGAGAG 59 14920973 14924188 ATTCCATCTGGCTCTTTGG 59 NA Mus musculus 50 Serpina1b ENSMUSG00000071178 ENSMUST00000095450 3 1 1 83 12 104970217 104970235 TGAGGCAGTGAAAGAACTG 59 104968712 104968730 AATGGCTTCTTCCATTTGC 58 NA DesignNoJunction Mus musculus 50 4930417O22Rik ENSMUSG00000071818 ENSMUST00000078285 2 1 1 175 11 101817394 101817415 ACATGTTATACTTGTCCCAGAG 59 101821119 101821137 AGGAGATCAGAAGATGGCA 59 NA DesignNoJunction, InUTR Mus musculus 50 MGI:1919424 ENSMUSG00000073126 ENSMUST00000110824,ENSMUST00000035694 1 2 3 67 12 33833334 33833352 AAAGCAGGGAGGTTATGAG 58 33902593 33902611 ATCATGTGCTGGATAATGG 57 NA DesignNoJunction Mus musculus 50 Wdfy1 ENSMUSG00000073643 ENSMUST00000113515,ENSMUST00000113514,ENSMUST00000113513,ENSMUST00000113512,ENSMUST00000097685 1 5 8 93 1 79713879 79715706 TGTTTGCAGTATGATCTGGA 59 79713805 79713823 CTGAACAAGTGTTCTGCTC 58 NA Mus musculus 50 OTTMUSG00000001088 ENSMUSG00000074594 ENSMUST00000109335,ENSMUST00000099095 1 2 2 80 2 164477230 164477248 ATCGTCCTCACTGTATCTG 58 164476110 164477187 AATCTCTTCAAGGTCATCCT 58 NA Nonspecific Mus musculus 50 Wfdc6a ENSMUSG00000074595 ENSMUST00000109342,ENSMUST00000099096 3 2 2 85 2 164405945 164409335 TCAGGCAAGATGTATGCAG 59 164405878 164405899 GTCAGTTTCTTGGTTATACCAC 58 NA Mus musculus 50 5033413D22Rik ENSMUSG00000075225 ENSMUST00000095227,ENSMUST00000019955 2 2 3 85 10 41272265 41273229 CAGCCAAGGAATCTATTCTC 57 41272199 41272217 CTGTTGATGGAGTAAAGCC 58 NA Mus musculus 50 4933432I09Rik ENSMUSG00000075346 ENSMUST00000100100 2 1 1 70 16 18211178 18211196 ATAAGACTCCTTCAGAGCC 58 18210950 18210970 GTTCTTCCTCCTTTATAGTGG 57 NA DesignNoJunction, InUTR Mus musculus 50 IGKV1-131 ENSMUSG00000076505 ENSMUST00000103306 2 1 1 64 6 67716277 67716295 GTTACCATTGGACAACCAG 58 67716231 67716251 CCATTACTATGTAAGAGGCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRDV5 ENSMUSG00000076873 ENSMUST00000103685 1 1 1 60 14 54768391 54768409 CAGAACCTTCCATCTGGTG 59 54768349 54768369 ACAGTAATAAGTAGCGCTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2810021G02Rik ENSMUSG00000078861 ENSMUST00000108924 3 1 2 93 2 177804532 177804551 CCTATAGGAATCTCACAGCT 57 177803097 177804269 ATTTCATGCCTTCCATGAC 58 NA Nonspecific Mus musculus 50 A2BE20_MOUSE ENSMUSG00000078879 ENSMUST00000100276 2 1 3 93 2 176463348 176463367 CCTATAGGAATCTCACAGCT 57 176463629 176467600 ATGTCAGGACTTCCAAGAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 mmu-mir-706 ENSMUSG00000076217 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 AA881470 ENSMUSG00000000148 ENSMUST00000110807,ENSMUST00000041588,ENSMUST00000110806,ENSMUST00000100505 1 4 5 64 5 141191115 141191133 GGTATTTGCTGTTCTCCTG 58 141191161 141192658 CCTTCTTTAGGACCATGGG 59 NA DesignRelaxed Mus musculus 50 Lck ENSMUSG00000000409 ENSMUST00000102596,ENSMUST00000067240 1 2 2 113 4 129232862 129232880 TAACCTCATGAAGCAGCTG 59 129229253 129232785 AAATCTACTAGGCTCCCGT 59 NA Mus musculus 50 Car4 ENSMUSG00000000805 ENSMUST00000103194,ENSMUST00000108076 3 2 2 81 11 84778311 84778329 CACCAAACTGTGATGAGAC 58 84778374 84779126 GAGAATTCCAGGAACTGGT 58 NA Mus musculus 50 Ocrl ENSMUSG00000001173 ENSMUST00000001202,ENSMUST00000115015,ENSMUST00000115013 3 3 4 80 X 45314631 45315268 GACAATTCCTGGCAATAACC 59 45315311 45315329 TAACAGATGACTGGCTCTG 58 NA Mus musculus 50 Hoxc11 ENSMUSG00000001656 ENSMUST00000001701 2 1 1 63 15 102786934 102786952 TTCGAAATTCCAGATCCGG 59 102786978 102786997 CTCTTTGTTGATGTACACGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Npas1 ENSMUSG00000001988 ENSMUST00000002053 3 1 1 124 7 17047276 17047506 GGTACAAGGTCATTCATGTG 58 17047171 17047189 GAAGACAATCATGTGTCCG 58 NA Mus musculus 50 Ccdc94 ENSMUSG00000003208 ENSMUST00000086869 2 1 1 60 17 56100226 56101450 TTCAACATGAGGTGTAAGAC 57 56101473 56101491 GTGCATTGAACTTCTTCCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Akt2 ENSMUSG00000004056 ENSMUST00000108344,ENSMUST00000108343,ENSMUST00000051356 2 3 3 60 7 28413960 28413978 CCACATCTGAGATGATGGA 58 28414002 28414325 TCATTCATGGTCACTTTGG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Sgce ENSMUSG00000004631 ENSMUST00000115579,ENSMUST00000115577,ENSMUST00000101677 3 3 4 141 6 4641510 4641530 CTATTACACGGATTTCCTCGT 59 4639755 4640474 GACAAGCTGGATATCTGGG 59 NA Mus musculus 50 Arid3b ENSMUSG00000004661 ENSMUST00000052570,ENSMUST00000114165,ENSMUST00000098686 3 3 4 116 9 57658281 57681434 CAGCTTAAGCAGAATGGTG 58 57658012 57658030 TTTCCTTTCAGGATCACCG 59 NA Mus musculus 50 AA536749 ENSMUSG00000005417 ENSMUST00000116371,ENSMUST00000108751,ENSMUST00000066330,ENSMUST00000072031,ENSMUST00000073066,ENSMUST00000108753,ENSMUST00000108750,ENSMUST00000116370 3 8 8 80 11 59582739 59582759 GAAATCCAGTACCTGAAACAG 58 59582799 59583403 ACTAGCATACTTCTTATCCCG 58 NA Mus musculus 50 Tmod4 ENSMUSG00000005628 ENSMUST00000005769,ENSMUST00000107227 3 2 2 81 3 94931338 94931515 AGAAGGCATTAGCAGTGTG 59 94931560 94931578 CTCCTCAATGTTTGTGGGA 59 NA Mus musculus 50 Ankrd13d ENSMUSG00000005986 ENSMUST00000056888,ENSMUST00000075870 1 2 2 248 19 4271125 4271232 CATTTCTGCTTCAGGAAGC 59 4270813 4270831 CTTCAAACACTGTGACTCG 58 NA DesignRelaxed Mus musculus 50 Snf8 ENSMUSG00000006058 ENSMUST00000006217,ENSMUST00000107700 3 2 2 300 11 95896636 95896654 AAGTATAAGGAGCGAGGGA 59 95903034 95904726 TTATCAGACCTCCATTCCG 58 NA DesignRelaxed Mus musculus 50 Itih1 ENSMUSG00000006529 ENSMUST00000006704 3 1 1 81 14 31754713 31754732 GGAGACTGATGCAGTATGAC 59 31754155 31754670 AAGATGTCCACATCGATCTC 59 NA Mus musculus 50 Tinf2 ENSMUSG00000007589 ENSMUST00000111342 1 1 3 96 14 56298552 56298927 CTAAGACTCCATCTCTGGC 58 56298474 56298492 TTCTTAGCCTAGCTTGGTG 58 NA InUTR Mus musculus 50 2610028H24Rik ENSMUSG00000009114 ENSMUST00000092406,ENSMUST00000105415 2 2 2 60 10 75917555 75920255 ATTAAGGAAGACATGGTGGA 58 75920278 75920296 TGAGAATCTGGTGCATCTG 59 NA DesignRelaxed Mus musculus 50 1700094C09Rik ENSMUSG00000010435 ENSMUST00000010579 2 1 1 80 8 12598971 12598990 ATGGGAAACTGTCTGTTCTG 59 12599032 12600578 AGATGCTTTCTGTTAGCTCC 59 NA Mus musculus 50 Gata2 ENSMUSG00000015053 ENSMUST00000015197 1 1 1 94 6 88154694 88155198 CTGCACAATGTTAACAGGC 59 88155255 88155274 CCTTTCTTGCTCTTCTTGGA 59 NA Mus musculus 50 Pcolce2 ENSMUSG00000015354 ENSMUST00000015498 3 1 1 80 9 95587250 95593290 GTAACTACAGGTCTAAAGCCC 59 95593331 95593350 ACAGTAATTGCTCTCCAGAG 59 NA Mus musculus 50 Gsdma2 ENSMUSG00000017211 ENSMUST00000093938,ENSMUST00000017355 1 2 2 114 11 98518601 98518834 AACTGAAGCTGGTTGAGAG 59 98518911 98518930 GTTAGAATCTGGTCCTCCTC 58 NA Mus musculus 50 Rab11fip4 ENSMUSG00000017639 ENSMUST00000017783,ENSMUST00000092864 2 2 2 81 11 79505390 79506231 TCTCGAGATGAGCTAATGG 58 79506273 79506294 GGATAATCTTGTCCATGTACTG 58 NA Mus musculus 50 Afmid ENSMUSG00000017718 ENSMUST00000073388 1 1 1 121 11 117697112 117697731 GTTCTACGAGACACTTCTCC 59 117697815 117699813 AAATGATCTGGGTGAGCAC 59 NA Mus musculus 50 H13 ENSMUSG00000019188 ENSMUST00000079247,ENSMUST00000109828,ENSMUST00000089059,ENSMUST00000109826 2 4 5 180 2 152514669 152514689 GGAGGACTCTTCATCTATGAC 59 152517603 152520231 TGAAGATCCCTGGAATGAC 58 NA Mus musculus 50 Cd164 ENSMUSG00000019818 ENSMUST00000019962 2 1 1 81 10 41242987 41243006 ACCTATTGTGCAAATGAACC 58 41243048 41243930 GAGTGGTAGGAGGTATTACAG 58 NA Mus musculus 50 Wdr51b ENSMUSG00000019952 ENSMUST00000020113 3 1 1 80 10 98570503 98587475 ACAAATTGCTACTGCTTCG 58 98587519 98587537 CCCACGTATCTGTAAGCTC 59 NA Mus musculus 50 Tmpo ENSMUSG00000019961 ENSMUST00000072239,ENSMUST00000092219,ENSMUST00000099355,ENSMUST00000105293,ENSMUST00000099357,ENSMUST00000020123 2 6 6 60 10 90628707 90628728 TCAGCTTGTAAGATATGGAGTG 59 90626927 90628688 ATATAGCTTCCTGGTTGTTCC 59 NA DesignNoJunction Mus musculus 50 Snrpd3 ENSMUSG00000020180 ENSMUST00000020397 3 1 1 93 10 74982127 74982145 CATAGTGACGTGTGAGACC 59 74982201 74994936 TGTGATGTTGGACATCTGAC 59 NA Mus musculus 50 Cpm ENSMUSG00000020183 ENSMUST00000020399 2 1 1 80 10 117066929 117096832 ATCTGTGAGAGGTAGAAACC 58 117096875 117096893 TTGAATTCTGGAATCCCGA 58 NA Mus musculus 50 Rhbdf1 ENSMUSG00000020282 ENSMUST00000020524 2 1 3 83 11 32114966 32114984 GACAATGTGTCCCTAACCA 59 32114594 32114920 GTCTATGATCTTCTGCATGC 58 NA Mus musculus 50 Phf15 ENSMUSG00000020387 ENSMUST00000109090,ENSMUST00000020655,ENSMUST00000074967,ENSMUST00000109091 2 4 4 63 11 51644124 51644767 CTCAAGGAGATGGAGAAGC 59 51644079 51644097 CTAGCTCCTCTAGAACACG 58 NA DesignRelaxed Mus musculus 50 Psmc5 ENSMUSG00000020708 ENSMUST00000021049 2 1 1 103 11 106122586 106122744 TATTGGTCAAGGTCCATCC 58 106122811 106122829 GTCATTTCTTAGAGCGACC 57 NA Mus musculus 50 Tmigd1 ENSMUSG00000020839 ENSMUST00000102495,ENSMUST00000072633 3 2 2 80 11 76720682 76723555 TGAACGTTACCTTTCCTCC 59 76723598 76723617 TGCAAACCAAACTTACATCG 59 NA Mus musculus 50 Psma6 ENSMUSG00000021024 ENSMUST00000021412 3 1 1 82 12 56508484 56508503 TGGACTTACATCTGTTGCTG 59 56508548 56509004 AATCCAGTAGTTTGTCGGG 59 NA Mus musculus 50 Zmynd11 ENSMUSG00000021156 ENSMUST00000110636,ENSMUST00000110637,ENSMUST00000062658,ENSMUST00000110634,ENSMUST00000021584 2 5 5 60 13 9693544 9693562 TTCTATCTGTCAAACGCAC 57 9692782 9693521 CATGATTAGGTATGCAAGGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Nup153 ENSMUSG00000021374 ENSMUST00000021803 2 1 1 80 13 46782860 46784438 TGAGTTTAAAGGCTTCGGG 59 46782798 46782817 GAAGAGGACGATGGAATACC 59 NA Mus musculus 50 Nsd1 ENSMUSG00000021488 ENSMUST00000099490,ENSMUST00000021944 3 2 3 83 13 55400030 55401062 ATATAAAGGTGAACCGGCC 59 55401108 55401127 TAGCTTTACAATTGCAACGG 59 NA Mus musculus 50 Irx4 ENSMUSG00000021604 ENSMUST00000022095 1 1 1 155 13 73404147 73404960 CATATGACAGGTACGGGAC 59 73405079 73405097 TCATCTTGGTGATGATGGC 59 NA Mus musculus 50 Zcchc9 ENSMUSG00000021621 ENSMUST00000022121 2 1 2 158 13 91940598 91940616 TTTCCATTGTCGACAACCT 59 91940296 91940476 AAAGGAAATTCACCAAGCG 58 NA Mus musculus 50 Erbb2ip ENSMUSG00000021709 ENSMUST00000053927,ENSMUST00000091269,ENSMUST00000022222 3 3 3 81 13 104650192 104650213 GAACAACTAAGTGGATTGAGAG 58 104649582 104650153 GTCTCAAACTACCAATAAACCC 58 NA Mus musculus 50 Nudt13 ENSMUSG00000021809 ENSMUST00000022343 1 1 2 86 14 21129008 21129850 TATTATCCACAGATGGCGC 59 21129900 21129918 CTTGGGAAAGGAACTCTGG 59 NA Mus musculus 50 Bin3 ENSMUSG00000022089 ENSMUST00000111041,ENSMUST00000022680 2 2 2 124 14 70528680 70528699 ATATCCCAGGACCTACTGTC 59 70528786 70529335 ATCTGGTTCACCTTCTCCT 59 NA Mus musculus 50 Dok2 ENSMUSG00000022102 ENSMUST00000022698 3 1 1 103 14 71175855 71175873 AGTTGTATAGCAGCTCCAC 59 71176684 71176702 GAGAGTATAGGACCCTCGG 59 NA DesignNoJunction Mus musculus 50 Amacr ENSMUSG00000022244 ENSMUST00000070877 3 1 1 91 15 10918619 10918637 TACACAACCTACAAGACGG 58 10918692 10924604 AGTCCAAGTCCTTTAAGCA 58 NA Mus musculus 50 A1bg ENSMUSG00000022347 ENSMUST00000096418 3 1 1 84 15 60751480 60751690 AAGATGTATGCCTCACAGG 59 60751414 60751433 GGGTCTCATATGTCTTCTGG 59 NA Mus musculus 50 Atad2 ENSMUSG00000022360 ENSMUST00000038194,ENSMUST00000022988 3 2 2 80 15 57937208 57938288 TGTTCCCAAATGATTCGTG 58 57937146 57937165 TATTTCCCACCACAAATGGA 59 NA Mus musculus 50 Upk3a ENSMUSG00000022435 ENSMUST00000023070 3 1 1 112 15 84849916 84849935 CTGAACGCATACCTAGTCAG 59 84850007 84850979 TACTTGAATCTGTACTCAGTGG 59 NA Mus musculus 50 Nckap1l ENSMUSG00000022488 ENSMUST00000047405 2 1 1 80 15 103293237 103294803 AATTCAGACACAATGGCCT 59 103294938 103294956 ATGGCAAAGAAGAAACCCA 59 NA Mus musculus 50 Prm1 ENSMUSG00000022501 ENSMUST00000023144 2 1 1 96 16 10796591 10796609 CGCTCATACACCATAAGGT 59 10796513 10796531 GATGCTCTTGAAGTCTGGT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Apod ENSMUSG00000022548 ENSMUST00000023207,ENSMUST00000115230 2 2 2 89 16 31303550 31303569 AAAGGAAACTGCATTCAAGC 59 31300554 31303498 CATGGTTCCATCAGGACTC 59 NA Mus musculus 50 Ildr1 ENSMUSG00000022900 ENSMUST00000089618,ENSMUST00000023617 1 2 2 158 16 36708496 36709572 CTTCTCTGCCTCATACCAG 59 36709694 36709712 TTCTGGATGGTGATCTTGC 59 NA Mus musculus 50 Psmg1 ENSMUSG00000022913 ENSMUST00000023630 2 1 1 83 16 96201710 96203718 CTTGGTGAAGAACATTCCT 57 96201645 96201664 CATGTGTAAATGTTGCTCTG 57 NA Mus musculus 50 Aars2 ENSMUSG00000023938 ENSMUST00000024733 1 1 1 83 17 45651771 45651789 TATTCCACAGAGGTCTTGC 58 45651836 45652205 ATAAGCAGATCCCAGTGTC 58 NA Mus musculus 50 Wiz ENSMUSG00000024050 ENSMUST00000087699 3 1 6 248 17 32518098 32524532 GAAGTGGCATTTCTGATGG 58 32515283 32515301 CTGAGTCCTTGAACCTCTG 59 NA DesignRelaxed Mus musculus 50 Svil ENSMUSG00000024236 ENSMUST00000025079 2 1 3 80 18 5088744 5088762 CAGTATACCCAGAAGTCCT 57 5088806 5090796 GAAGATGTCAACTTGGGAG 57 NA Mus musculus 50 Dtna ENSMUSG00000024302 ENSMUST00000053770 2 1 7 112 18 23704259 23707623 AATGCAATTCAACAGTGGC 59 23707698 23707717 GTCTCTTGAGGTCTCTTGAG 59 NA Mus musculus 50 Apom ENSMUSG00000024391 ENSMUST00000025249 2 1 1 82 17 35267117 35267364 TTCTCCTCTACAATCGGTC 58 35267053 35267071 TTTGAAGTCCAAGCAAGAG 57 NA Mus musculus 50 Cidea ENSMUSG00000024526 ENSMUST00000025404 3 1 1 80 18 67519830 67519849 GTTCTTTCAGACCTTAAGGG 57 67519892 67526042 ACATACTTACTACCCGGTG 58 NA Mus musculus 50 Me2 ENSMUSG00000024556 ENSMUST00000025439 2 1 1 81 18 73956040 73957499 ATCTTTAGGAGACCTAAGGGA 59 73955979 73955997 TTTCTGGCCAGTTATCCAC 59 NA Mus musculus 50 Tm9sf3 ENSMUSG00000025016 ENSMUST00000067800,ENSMUST00000025989 1 2 2 80 19 41309217 41309236 TTGTCTATGCTGCTACATCG 59 41306949 41309175 TTATCCATCTCCTTCCTCCT 59 NA Mus musculus 50 Lrrc45 ENSMUSG00000025145 ENSMUST00000026139 1 1 1 80 11 120579969 120579987 TTGGATGTGGAGAAGAGGA 59 120580030 120580368 AGTCATATGATCCACCTCCT 59 NA Mus musculus 50 Fgd1 ENSMUSG00000025265 ENSMUST00000112685,ENSMUST00000026296 2 2 3 80 X 147503440 147503459 GTTCCATATTGCCAATGAGC 59 147503502 147504195 GCACAGAATACCTGATCCA 59 NA Mus musculus 50 Apex2 ENSMUSG00000025269 ENSMUST00000112725,ENSMUST00000112720 1 2 6 110 X 147021659 147022473 AGTGACCAGAGATGTACTG 57 147020570 147020588 TTACAGAAGGTAGCCACAC 58 NA Mus musculus 50 Abhd6 ENSMUSG00000025277 ENSMUST00000026313 1 1 1 80 14 8860893 8872271 ATCTATTATTGGTACTGGCGG 59 8872310 8872331 GGAGTAACAGAACTGATAGTCC 59 NA Mus musculus 50 Tm9sf2 ENSMUSG00000025544 ENSMUST00000026624,ENSMUST00000100295 3 2 2 82 14 122551287 122554557 TATGTGCAGAGGATTACCA 57 122554605 122554623 TGTATGGCGTATATCAGGA 57 NA Mus musculus 50 Ube2w ENSMUSG00000025939 ENSMUST00000097819 1 1 2 163 1 16588130 16592356 AATTCAATCACGCAGTGGA 59 16575387 16575405 AATGCTGAGACAGACTGAC 59 NA Mus musculus 50 Adam23 ENSMUSG00000025964 ENSMUST00000114103,ENSMUST00000114108,ENSMUST00000114107,ENSMUST00000087374,ENSMUST00000114101,ENSMUST00000097717 3 6 6 90 1 63562201 63575337 AGATGTACTCTAAGGGTGGA 58 63575390 63575408 CCATTGCAGGTCGATAGAG 59 NA Mus musculus 50 Ppil3 ENSMUSG00000026035 ENSMUST00000114348,ENSMUST00000081677,ENSMUST00000114345 1 3 3 82 1 58497738 58497758 GTAATTACTACAACGGCTGTG 59 58495245 58497694 TCTTCCAGTACCTGTTGGA 59 NA Mus musculus 50 Mrpl30 ENSMUSG00000026087 ENSMUST00000027256 3 1 1 81 1 37952247 37954543 CCAGATAAAGTGTTTCAGCC 58 37954587 37954605 CAATGTGCAGTTTGTGAGG 59 NA Nonspecific Mus musculus 50 Speg ENSMUSG00000026207 ENSMUST00000087122,ENSMUST00000113590,ENSMUST00000038230 1 3 3 218 1 75388488 75388506 TACCTGTGCTTCTTCACTG 59 75397798 75398048 ATGAGTGAGACCTTGAACG 59 NA DesignRelaxed Mus musculus 50 Klhl12 ENSMUSG00000026455 ENSMUST00000027725,ENSMUST00000112232,ENSMUST00000116528 2 3 3 80 1 136360490 136360509 AACAGTACATGTGACAGTGG 59 136360551 136364240 GCTTGTTTCACACCTTTCAG 59 NA Mus musculus 50 Xpr1 ENSMUSG00000026469 ENSMUST00000027741,ENSMUST00000111775,ENSMUST00000111774 2 3 4 80 1 157160352 157160371 CTGGAGTAAATCATGTCCTC 57 157160059 157160309 ATCCAGCAATCTCAAAGAG 57 NA Mus musculus 50 Rgs5 ENSMUSG00000026678 ENSMUST00000027997 1 1 1 115 1 171607024 171607044 CATTCCATACAATGAGAAGCC 59 171612937 171620555 CAAATCCATAGCTGTTCTGG 58 NA Mus musculus 50 Golga1 ENSMUSG00000026754 ENSMUST00000039165,ENSMUST00000112850 2 2 2 80 2 38890791 38890809 CTGAAGAACAGCTAAGCCA 59 38889715 38890749 CCTGGTTTGTAGTGATAAGCT 59 NA Mus musculus 50 Abca2 ENSMUSG00000026944 ENSMUST00000102919,ENSMUST00000114269,ENSMUST00000095124 1 3 3 80 2 25291945 25291963 AACATCTCCACAGAGATCC 58 25292006 25292117 AGCTACATACTGCTGTAACC 59 NA Mus musculus 50 Zfp385b ENSMUSG00000027016 ENSMUST00000099977,ENSMUST00000111829 3 2 5 153 2 77557626 77557644 CCATTATGACGGCAAATCC 58 77366697 77557510 TACAACTTGGGCTGTTACTG 59 NA Mus musculus 50 Ccdc34 ENSMUSG00000027160 ENSMUST00000028580 3 1 2 175 2 109858343 109858361 GAAGGAATAGAGTTCCAGC 57 109862166 109872502 TGCTGATTTAATTCCTCCAG 57 NA Mus musculus 50 Ndufaf1 ENSMUSG00000027305 ENSMUST00000110802,ENSMUST00000110801,ENSMUST00000028768 3 3 3 93 2 119484074 119484092 ACACGGAGTTTATCCAGAG 58 119482168 119484019 GAGAAAGGAATCTTGACTTCC 58 NA Mus musculus 50 Nphp1 ENSMUSG00000027378 ENSMUST00000110357,ENSMUST00000028857 2 2 3 80 2 127585359 127585378 CAGGTCCAATTCTTCAACTC 58 127583484 127585316 CTCTCACCAGTTGAATTGC 58 NA Mus musculus 50 Rbl1 ENSMUSG00000027641 ENSMUST00000029170 2 1 1 80 2 156985440 156985461 TTCTCTTGAAGAGTATTCCAGG 59 156978766 156985399 TGGCATCTTCTATGTCACC 59 NA Mus musculus 50 Sass6 ENSMUSG00000027959 ENSMUST00000029571 1 1 1 82 3 116324353 116324372 CATTGACATTCCAGAATGCT 58 116324417 116329999 AAAGTGAACCTTTGGTCCA 59 NA Mus musculus 50 Larp7 ENSMUSG00000027968 ENSMUST00000029588 3 1 1 136 3 127250032 127250050 GAAGCTAATAGCCAGAGCA 59 127249727 127249848 GGAGCAACTCCACATATACC 59 NA Mus musculus 50 Lef1 ENSMUSG00000027985 ENSMUST00000106341,ENSMUST00000029611,ENSMUST00000098611 1 3 3 80 3 130816833 130818341 TGATGAAGGAAAGCATCCA 58 130818385 130818403 GGCATCATTATGTAGCCAG 58 NA Nonspecific Mus musculus 50 Ecm1 ENSMUSG00000028108 ENSMUST00000029753,ENSMUST00000074315 1 2 2 80 3 95538827 95539135 GTCCTTAGCAAGCATAAACAG 59 95538767 95538786 CTGTTCTGGATATGGAAGCT 59 NA Mus musculus 50 Zranb2 ENSMUSG00000028180 ENSMUST00000106063 2 1 1 69 3 157203661 157204026 GGAATATGATGAGTTTGGACG 58 157204057 157204075 TAATATAGATGCAGGGCCA 57 NA Nonspecific, DesignRelaxed Mus musculus 50 5830415F09Rik ENSMUSG00000028331 ENSMUST00000086563 2 1 2 102 4 46393039 46393057 TTCTTCACTGTGGACACAG 59 46390111 46392974 GGAGTACAGTCTGAACAGAC 59 NA Mus musculus 50 Snx30 ENSMUSG00000028385 ENSMUST00000030080,ENSMUST00000058721 2 2 2 81 4 59899409 59899430 GACAGATGACATAACAGAAGAG 58 59899471 59905345 CTTCAATACACCCTTCATGG 58 NA Mus musculus 50 Tesk1 ENSMUSG00000028458 ENSMUST00000060864 1 1 1 97 4 43457986 43458164 CTGTGTATAGGGAAGGGAC 58 43458225 43458243 CTCATCATACAGCTCTCCC 58 NA Mus musculus 50 Pink1 ENSMUSG00000028756 ENSMUST00000030536,ENSMUST00000105817 1 2 3 126 4 137873983 137875914 GTTACTTACAGAAGATCCAGAG 57 137873878 137873896 TATCAGGATAGTCAGCCAG 57 NA Mus musculus 50 Zcchc17 ENSMUSG00000028772 ENSMUST00000105995,ENSMUST00000030555 1 2 2 158 4 130015762 130015783 CTTCTGAGATAGTAGATGTTGG 57 130006908 130014329 TCTCTTCTTGCTCAATGAC 57 NA Mus musculus 50 Hpca ENSMUSG00000028785 ENSMUST00000030572 2 1 2 81 4 128795655 128795673 TTCAGCATGTATGACCTGG 59 128790009 128795610 CCATCTTGTAAATGGCCTG 58 NA Mus musculus 50 2410081M15Rik ENSMUSG00000028807 ENSMUST00000030610 2 1 1 112 4 129031739 129034958 TTTCCGAACTATTCACCAGG 59 129031646 129031664 TACATAGTCTGTAGCGCCT 59 NA Mus musculus 50 Plch2 ENSMUSG00000029055 ENSMUST00000105631,ENSMUST00000030929,ENSMUST00000105630 1 3 3 80 4 154376913 154376931 CCTACAGCAACCATAAGGA 58 154374994 154376869 TCACACCGTTCATCTTCTG 59 NA Nonspecific Mus musculus 50 Lrpap1 ENSMUSG00000029103 ENSMUST00000030986 2 1 1 113 5 35440887 35440905 ATTCTCCAGTGAAGAGCTG 58 35440329 35440812 TCATAACCTTCTTCAGCTCTG 59 NA Mus musculus 50 Nsun7 ENSMUSG00000029206 ENSMUST00000031109,ENSMUST00000065530,ENSMUST00000113720 3 3 3 84 5 66655849 66667762 CCTTCTAAACGGCTTTAAGAC 58 66667806 66667826 AATATGGTAAATCGAGAGGGC 59 NA Mus musculus 50 Camkk2 ENSMUSG00000029471 ENSMUST00000111668,ENSMUST00000047365,ENSMUST00000086224,ENSMUST00000111667 3 4 4 102 5 123198201 123200036 CATCTGTACATGGTGTTTGAG 58 123197984 123198002 GATCCTGGAAGTAGAAGCG 59 NA Mus musculus 50 1700018F24Rik ENSMUSG00000029620 ENSMUST00000031624 1 1 1 261 5 145804015 145804033 ATGCTTCAGACAGGAATCC 59 145805003 145805596 AATATGGCACTCTTTGTGAG 57 NA DesignRelaxed Mus musculus 50 Pop7 ENSMUSG00000029715 ENSMUST00000111035,ENSMUST00000031728 3 2 2 85 5 137943156 137943174 AAGACTGACTTTAAGGCCC 59 137943089 137943107 TAGATTTCAGTGCATGCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trim24 ENSMUSG00000029833 ENSMUST00000031859 2 1 1 82 6 37910783 37910801 ATGTGAACGCCTACTTCTG 59 37910847 37914712 AATCAGGCACAGTTAGAGG 58 NA Mus musculus 50 1700074P13Rik ENSMUSG00000029883 ENSMUST00000031935 3 1 1 90 6 40876030 40876049 CATAGCTATGGAACCAATGG 58 40871835 40875978 GATGTCAGGATCACTAAGGT 58 NA Mus musculus 50 Creld1 ENSMUSG00000030284 ENSMUST00000032422 2 1 1 132 6 113441705 113441723 CACAGAAGGATCCTACGAG 58 113441976 113442128 CTCATCCACATCTAGGCAC 59 NA Mus musculus 50 Ercc2 ENSMUSG00000030400 ENSMUST00000062831,ENSMUST00000108460 2 2 2 85 7 19972172 19972291 CAACATCGACAATGTCTGC 59 19972340 19972358 GGGTGTCTAAGTTGCTCTG 59 NA Mus musculus 50 Klk7 ENSMUSG00000030713 ENSMUST00000032955 2 1 1 86 7 51067800 51067818 CAATCAGCTTCACTGTGGA 59 51067868 51068179 TGTACTTGGTACTGACCCA 59 NA Mus musculus 50 2400001E08Rik ENSMUSG00000030842 ENSMUST00000033131 3 1 1 80 7 109058253 109058271 TACCATAGCCTACCTTCAG 57 109058315 109058552 AATGATGTTGCTAGCTGTC 57 NA Nonspecific Mus musculus 50 Oraov1 ENSMUSG00000031072 ENSMUST00000033388 1 1 2 244 7 152102426 152103520 GATTGGGTCTGAGATTGGA 58 152105539 152105557 GAGTCACCTTGAAGTCTGG 59 NA DesignRelaxed Mus musculus 50 2610002M06Rik ENSMUSG00000031242 ENSMUST00000033594 1 1 1 80 X 104988337 104988442 ACCTTGAGAAGATTTCTGCC 59 104988276 104988294 CTTCCATTTGCTGTGTCTG 59 NA Mus musculus 50 Abcb7 ENSMUSG00000031333 ENSMUST00000033695 1 1 1 80 X 101499734 101500621 GTTCTGATTGGCTATGGTG 58 101499672 101499691 TGCTACTTTGCCAAATACTG 58 NA Nonspecific Mus musculus 50 Asb9 ENSMUSG00000031384 ENSMUST00000033756 2 1 1 89 X 160973479 160977475 TCTTGCAGAATGAAGGACC 59 160977527 160977546 AAATCTTATGATGCTGCCGA 59 NA Mus musculus 50 Mpp1 ENSMUSG00000031402 ENSMUST00000033775,ENSMUST00000064027,ENSMUST00000114091 2 3 3 89 X 72363281 72366781 CGCTACAGATGTTCATGAG 57 72363210 72363228 TAACAAACTTCAGTCCTGC 57 NA Mus musculus 50 Thex1 ENSMUSG00000031527 ENSMUST00000033927 1 1 1 80 8 36545774 36554266 GCTTGAAACAAGAGGAGTC 58 36545712 36545731 TCTTTCAGCATCAACTTCTG 58 NA Mus musculus 50 Pde4c ENSMUSG00000031842 ENSMUST00000110095,ENSMUST00000034307 3 2 2 92 8 73272407 73272813 ATGGTCATAGACATGGTGC 59 73272869 73272887 GGTCACTTTCTTCGTCTCC 59 NA Mus musculus 50 Stoml1 ENSMUSG00000032333 ENSMUST00000034883 1 1 1 105 9 58108811 58109461 CTTACTACAGGACAAGGCC 59 58109530 58109548 GTTCTTTGCTCAACAAGGC 59 NA Mus musculus 50 Snx14 ENSMUSG00000032422 ENSMUST00000034995 3 1 1 80 9 88317784 88317803 TCTACTGTTCATTAGGACCC 58 88315651 88317741 GAAGTCCTAATTGCTTGGG 58 NA Mus musculus 50 Nck1 ENSMUSG00000032475 ENSMUST00000116522,ENSMUST00000035050,ENSMUST00000112874 2 3 3 65 9 100397708 100397726 ATGAAAGAGGGCATGAAGG 59 100396075 100397679 CTGAGAAATCATTTGGCGA 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Mtap4 ENSMUSG00000032479 ENSMUST00000035055,ENSMUST00000072772,ENSMUST00000065171 1 3 3 92 9 109966945 109969998 AAGCCAAAGCCAATTACAG 58 109970054 109970072 TTTAGGTCCAGGTTTGAGG 58 NA Mus musculus 50 Dhx30 ENSMUSG00000032480 ENSMUST00000035056,ENSMUST00000111991,ENSMUST00000062368,ENSMUST00000084965 3 4 4 87 9 109989991 109990009 CAAGGAACACTACCTGGAG 59 109989688 109989940 TTCATCTTCCGACTCATGG 59 NA Mus musculus 50 Uba5 ENSMUSG00000032557 ENSMUST00000035166 2 1 1 81 9 103951616 103951635 CTGAAGAACTCTTCAGGTCC 59 103950007 103951572 AATCCTCCGTCTTCTTTGG 59 NA Mus musculus 50 Hemk1 ENSMUSG00000032579 ENSMUST00000035196 1 1 1 121 9 107238903 107238921 GTGGCCGTAGATTACAGAG 59 107233902 107238520 AACCAGTTCTTCTGTCTCTG 59 NA Mus musculus 50 Nckipsd ENSMUSG00000032598 ENSMUST00000035218 2 1 1 86 9 108717004 108717022 AGAAGCTCTGTTACTCTGC 58 108717072 108717270 TACCCAGGTGTTCATAGTG 58 NA Mus musculus 50 Crebl2 ENSMUSG00000032652 ENSMUST00000111938,ENSMUST00000046303 1 2 2 80 6 134799250 134799268 CAGTACTTGGAGGAGTTGG 59 134799312 134801109 CCACTGCTTGTACATTTCC 58 NA Mus musculus 50 Mansc1 ENSMUSG00000032718 ENSMUST00000047443 2 1 1 65 6 134571778 134571796 CAGGAAGACTGTATCGGTG 59 134567456 134567475 CAAATTACATGCCTTGTCCC 59 NA DesignNoJunction Mus musculus 50 Fshr ENSMUSG00000032937 ENSMUST00000035701 1 1 1 82 17 89444482 89445986 CCCAACTTGCATGAAATTAGG 59 89444420 89444438 AGACTGGGAAGATTCTGGA 59 NA Mus musculus 50 Guca2b ENSMUSG00000032978 ENSMUST00000106309 3 1 2 234 4 119330316 119331134 GAATGGATTCCCTGTACCA 58 119329422 119329441 ATACACAGTTCACATTCGTC 57 NA DesignNoJunction Mus musculus 50 Klra1 ENSMUSG00000033024 ENSMUST00000116521,ENSMUST00000071554,ENSMUST00000112032,ENSMUST00000014476,ENSMUST00000088019,ENSMUST00000112034 3 6 6 83 6 130072105 130072123 GTGGATGTAAAGCGAACTG 58 130069069 130072058 GGCGTTGAAGGAATTTCAG 59 NA Nonspecific Mus musculus 50 Atg9a ENSMUSG00000033124 ENSMUST00000040689 3 1 1 81 1 75184677 75186152 AGATGTTTGAACTCATGCAG 58 75184615 75184634 AAGAGGATGTCATAGTCCAC 58 NA Mus musculus 50 Phldb2 ENSMUSG00000033149 ENSMUST00000076333,ENSMUST00000036355,ENSMUST00000077934 1 3 3 80 16 45801650 45801671 GATTCTAGATCATCTAAACCGG 57 45789217 45801611 AGCTTTACCTTCTCCTTAGTC 58 NA Mus musculus 50 Rbm9 ENSMUSG00000033565 ENSMUST00000063150,ENSMUST00000048145,ENSMUST00000089470,ENSMUST00000109780,ENSMUST00000096360 1 5 5 88 15 76929754 76929878 TTATATGCAGCATCCAGCT 58 76929684 76929702 TAAGTGTTGATGCCTCCTC 58 NA Mus musculus 50 Myo5c ENSMUSG00000033590 ENSMUST00000036555,ENSMUST00000113474 2 2 2 80 9 75110034 75110053 AACAGCTTTGAACAGTTCTG 58 75110094 75110809 CTCAAGTTTAAAGACGTGCAG 59 NA Mus musculus 50 Ddx19b ENSMUSG00000033658 ENSMUST00000040241 1 1 2 97 8 113551515 113551533 CTAGCAGTAGACGAACAGG 59 113546342 113547871 TTAACAACAGCACCATTGG 58 NA Mus musculus 50 Lrrc24 ENSMUSG00000033707 ENSMUST00000049956 2 1 1 219 15 76548835 76548853 CTACCTGCACAACAATACC 58 76548504 76548652 ATGAAGTTCCTGTAGTCGC 59 NA DesignNoJunction Mus musculus 50 Nrxn2 ENSMUSG00000033768 ENSMUST00000113459 2 1 6 90 19 6517247 6519265 AGAACACAGATGACCTCCT 59 6519318 6542350 GTAACAGCACCAGTACTAGG 59 NA Mus musculus 50 Gria2 ENSMUSG00000033981 ENSMUST00000107746,ENSMUST00000107745,ENSMUST00000075316 2 3 3 80 3 80511176 80511637 GAGAACTTGTATATGGGAAAGC 58 80511117 80511137 AGAAGTCAATCACCTCTTCTC 59 NA Mus musculus 50 Mks1 ENSMUSG00000034121 ENSMUST00000038196 3 1 1 80 11 87670370 87670390 GAACAACCACGCTATTAACAC 59 87670429 87670700 TTATAGCCAAGCTTTCCATAGG 59 NA Mus musculus 50 Tbxa2r ENSMUSG00000034881 ENSMUST00000105325 2 1 1 74 10 80795937 80795955 GGAGATGATGGTTCAGCTC 59 80795993 80797214 ATGATGAAGACCAGCAAGG 59 NA DesignRelaxed Mus musculus 50 Hrh2 ENSMUSG00000034987 ENSMUST00000038101 2 1 1 151 13 54310321 54310339 CTGAGGTTGAACAACTCTC 57 54316594 54316612 CAACTTGAGTGACTCAGTC 57 NA DesignNoJunction Mus musculus 50 Map2k2 ENSMUSG00000035027 ENSMUST00000099460 2 1 3 140 10 80581891 80582006 AGATCATGCACAGAGATGTG 59 80586537 80586556 CAACAAACAGCATCACTGTC 59 NA Mus musculus 50 A930041I02Rik ENSMUSG00000035236 ENSMUST00000038874,ENSMUST00000090983 3 2 2 80 2 38935690 38935904 ACGTTCAATAGATCAGGCC 59 38935628 38935648 GAACAGAAGACAAACCTTGTG 59 NA Mus musculus 50 Crb2 ENSMUSG00000035403 ENSMUST00000050372 3 1 1 86 2 37650164 37650910 CAGATGTCAGAGTCTCGAC 59 37650959 37650978 CATTCAAATATGCCACTGGC 59 NA DesignNoJunction Mus musculus 50 Gc ENSMUSG00000035540 ENSMUST00000049209 1 1 1 82 5 89872474 89872493 TGGAACCAACAAATGATGAG 58 89870702 89872432 GGAATACTCATACAGAAACTGG 58 NA Mus musculus 50 Krt33a ENSMUSG00000035592 ENSMUST00000018399 1 1 1 100 11 99873425 99873662 GCATGAACTGAGAAACTCTC 58 99873344 99873362 ACTCCACATTGGTGATCAG 59 NA Mus musculus 50 Tbc1d9b ENSMUSG00000036644 ENSMUST00000101270,ENSMUST00000093138 3 2 2 90 11 49972037 49972172 GTATCCTACGAGAAGTTCAGC 59 49972224 49972242 CTTCCAAGGACTGGATCAC 59 NA Mus musculus 50 Man1b1 ENSMUSG00000036646 ENSMUST00000114304,ENSMUST00000042390 2 2 2 175 2 25198769 25198787 AGTGATTGAGGCCTTTCTC 59 25198925 25200502 TGGCTTGCTTAAATTCTTGC 59 NA InUTR Mus musculus 50 4933433C11Rik ENSMUSG00000036770 ENSMUST00000043774,ENSMUST00000114363 2 2 2 120 2 25069779 25069798 AATGAGTCCACACCTATCAG 58 25069585 25069603 GAGACATATTGGGCACCTC 59 NA DesignNoJunction Mus musculus 50 Islr ENSMUSG00000037206 ENSMUST00000041477 2 1 1 62 9 58004906 58004924 GCTATACGGTTGACAACGA 59 58004862 58004883 GGTAAATGATAACCACGTTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Atp11b ENSMUSG00000037400 ENSMUST00000108186,ENSMUST00000029257,ENSMUST00000108185 3 3 3 80 3 35687409 35687427 CCTCAGATCGACTTGATGG 59 35687469 35688492 CTGACACATGTGTCTTTAGGT 59 NA Mus musculus 50 Vgf ENSMUSG00000037428 ENSMUST00000041543 1 1 1 82 5 137506896 137506914 TCCTTCTACTGATCCAGGG 59 137506960 137506978 ATTATGCTCAGAGCTGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Aldh8a1 ENSMUSG00000037542 ENSMUST00000042699 3 1 1 93 10 21111456 21111475 CAGAAAGTGGAAAGTTGGTG 59 21111528 21115208 GACATAACTTCTGACTTTCTCC 58 NA Mus musculus 50 Kcnk2 ENSMUSG00000037624 ENSMUST00000079451,ENSMUST00000110920 2 2 2 80 1 191119582 191163675 GAACTCATCCAGCAAATAGTG 59 191119522 191119542 CCAGTGACTAACTTGATTGGA 59 NA Mus musculus 50 Jmjd1c ENSMUSG00000037876 ENSMUST00000051446,ENSMUST00000095573 1 2 2 80 10 66686861 66686880 TCGACCTCACAAGATTACAG 59 66686921 66687496 CTCTCCAATTCTTCTTTGTGG 58 NA Mus musculus 50 MGI:3646552 ENSMUSG00000037982 ENSMUST00000042585 3 1 1 60 8 83539105 83539123 GAGCTCTGAGGTTCTTGTC 59 83539146 83539165 CTGAGTTTCTAACCCTCACC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 F11r ENSMUSG00000038235 ENSMUST00000043839 1 1 1 84 1 173392734 173393025 GAACAAAGAAAGGGACTGC 58 173393191 173393209 GAGGTCTGTTTGAATTCCC 58 NA Mus musculus 50 Gdf5 ENSMUSG00000038259 ENSMUST00000109628 2 1 2 289 2 155770182 155770200 AGCTTTATTGACAAAGGGC 58 155767884 155767902 GGAAGAGCTTCCAGATGTC 59 NA DesignNoJunction Mus musculus 50 AI317395 ENSMUSG00000038522 ENSMUST00000045447 1 1 1 94 10 39725851 39725869 TTATCTCATCCCGTTCTGC 59 39723387 39725793 CATTTGCACCTGTATCCAC 58 NA Mus musculus 50 Zfp280d ENSMUSG00000038535 ENSMUST00000098576,ENSMUST00000043096,ENSMUST00000062088 3 3 3 82 9 72178907 72178926 ATGCAGAAGAAACAAAGCAC 59 72178970 72179108 CGACGTAACCTTAAGTTCCT 59 NA Mus musculus 50 Gm129 ENSMUSG00000038550 ENSMUST00000036418 3 1 1 286 3 95685207 95685225 ATACAGCACCTCATCTGGA 59 95684434 95684567 ATAACGTTCTCCCATCTGAG 58 NA DesignRelaxed Mus musculus 50 Prl3a1 ENSMUSG00000038883 ENSMUST00000049463 1 1 1 80 13 27364339 27366973 ACAGACACAATCAGATGTCC 59 27367016 27367034 CGCACAAGTTGTTTCAGAG 59 NA Mus musculus 50 Pogz ENSMUSG00000038902 ENSMUST00000107270,ENSMUST00000042402 2 2 2 218 3 94660096 94660114 CTTGTCACACTAATTGCCA 57 94664890 94666358 CCTTACAGGAAATCCCTGG 59 NA DesignRelaxed Mus musculus 50 Prc1 ENSMUSG00000038943 ENSMUST00000047558,ENSMUST00000047549 1 2 2 80 7 87455709 87455730 TGGAGTATGTTACAGAACAGTG 59 87455771 87455971 TCTTGTTCTTCAGTTGCCT 59 NA Mus musculus 50 Tsga13 ENSMUSG00000039032 ENSMUST00000048580 1 1 1 82 6 30858518 30858539 GTATGATACAACTGCACAATCG 59 30857592 30858478 CATAGTATTTGGCCATGTTTGG 59 NA Mus musculus 50 Lsm14b ENSMUSG00000039108 ENSMUST00000055485 3 1 3 151 2 179761491 179762610 TGCTATTGTTCAGTCCTCC 58 179762725 179766068 CTCCTAGACCTAAGGAAGC 58 NA Mus musculus 50 Tbcd ENSMUSG00000039230 ENSMUST00000103013,ENSMUST00000036990 2 2 3 80 11 121358383 121358403 TGTCTGATAGTTTGACCTCTG 59 121358445 121360361 CCAGTAGCTGCTCTATCAC 59 NA Mus musculus 50 Megf9 ENSMUSG00000039270 ENSMUST00000107359,ENSMUST00000037881 2 2 2 80 4 70096513 70109708 ATTGCACCATTGAATCTGGA 59 70096452 70096471 ATTTATTGCAGTTCTGGCCT 59 NA Mus musculus 50 Ralyl ENSMUSG00000039717 ENSMUST00000081617,ENSMUST00000108373 3 2 2 70 3 13776949 13776967 AAAGGTCGACATTGAAGCT 59 13777000 13777019 CATACCCTTTGTGAACAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 4833442J19Rik ENSMUSG00000039958 ENSMUST00000111548 3 1 4 131 6 149091226 149092563 CAGTTCAATCAGAGATCCAG 57 149092655 149092675 CCATTAGTACATCTCCAAACC 58 NA InUTR Mus musculus 50 Ptger3 ENSMUSG00000040016 ENSMUST00000071906 1 1 2 60 3 157268069 157268088 TCTGCTGCTAAGAAAGATCC 59 157304687 157304705 ATAGTTGGTGTGGTCTCTG 58 NA DesignNoJunction Mus musculus 50 Saa3 ENSMUSG00000040026 ENSMUST00000006956 3 1 1 80 7 53970428 53970446 CTTTGCATCTTGATCCTGG 58 53968084 53970385 CATGTCTCTAGACCCTTGAC 59 NA Mus musculus 50 Syt15 ENSMUSG00000041479 ENSMUST00000035351 1 1 1 109 14 35036317 35038103 ATCTTCCAGGTATCCAGCA 59 35038176 35038194 AATGGGAATAGCACCTGTC 59 NA Mus musculus 50 Svop ENSMUSG00000042078 ENSMUST00000058472 3 1 1 93 5 114481645 114482730 TCTGCATTGGAAGAAATGTG 58 114481571 114481589 TCAGGCGTGTAAACATAGG 59 NA Mus musculus 50 Pars2 ENSMUSG00000043572 ENSMUST00000106782,ENSMUST00000106781,ENSMUST00000058905 3 3 3 60 4 106326003 106326021 CTCATGCCCTATACAGTGC 59 106326045 106326063 GCATCTCCTGGTCTATCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Wfikkn2 ENSMUSG00000044177 ENSMUST00000061469 3 1 1 84 11 94100415 94103670 AGGAATGTGAGACCTATGAG 58 94100350 94100368 CCTTTCACATCCATGTAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfand3 ENSMUSG00000044477 ENSMUST00000052403 1 1 2 104 17 30272428 30272446 AACTTCACCGAGTACAGAG 58 30290311 30329523 TTCTCGGACTGTGAATCTG 59 NA Mus musculus 50 Shb ENSMUSG00000044813 ENSMUST00000107795,ENSMUST00000061986,ENSMUST00000098095 1 3 3 104 4 45502004 45502022 ATCCCTTTGATGCCAAGAG 59 45471206 45501938 TCTGGAATTCTGTCATGATCC 59 NA Mus musculus 50 B230219D22Rik ENSMUSG00000045767 ENSMUST00000057844,ENSMUST00000109900 3 2 2 63 13 55800533 55800551 GATCTGTATTCCTCCCAGC 59 55800578 55800596 GACAAACCATTGGTTTGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pnlip ENSMUSG00000046008 ENSMUST00000057270 3 1 1 81 19 58755328 58755346 TGATCAACCCAACTCTACC 58 58755389 58756168 CTACAGAAGTTGAACACTCTG 58 NA Mus musculus 50 D230037D09Rik ENSMUSG00000046675 ENSMUST00000057416 1 1 1 60 12 103982821 103982840 GGAGAATGATGAACTTCCGT 59 103982863 103982881 GCTAGCAAATACAGTCCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr914 ENSMUSG00000047050 ENSMUST00000057755 3 1 1 60 9 38414419 38414437 ATGTGGCCATTTGTAATCC 58 38414459 38414479 TAGGAACACATCTTTGGAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC107230 ENSMUSG00000047257 ENSMUST00000011391 3 1 1 87 9 110743043 110743355 GACTTGTGCTATGGAGACC 59 110743405 110743424 CCTTCTCCCATGAGAATACC 59 NA Mus musculus 50 Hdhd1a ENSMUSG00000048875 ENSMUST00000056460 3 1 1 60 18 50727927 50727946 TACCTTCCAAACAAAGACCA 59 50727886 50727905 AACGATGTGGTGAAATAGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr398 ENSMUSG00000049041 ENSMUST00000053874 2 1 1 96 11 73798071 73798089 CATACAAACCACAGTTCCA 57 73797993 73798012 GCATTGAGTAGGTAAATGCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Frmd3 ENSMUSG00000049122 ENSMUST00000056548,ENSMUST00000084474,ENSMUST00000098006 2 3 3 80 4 73807957 73807976 AAAGTTGCTAAAGAGGTGGT 59 73808016 73816557 CTGAGTAATGTTGACTCTATGC 58 NA Mus musculus 50 Ppm2c ENSMUSG00000049225 ENSMUST00000108297,ENSMUST00000108299,ENSMUST00000108302,ENSMUST00000095144,ENSMUST00000108301,ENSMUST00000056050 2 6 6 60 4 11888125 11888143 GCCAGAGGTAACTTATCAC 57 11888083 11888102 ATCAGTTGCTAACACTAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp2 ENSMUSG00000049321 ENSMUST00000116378,ENSMUST00000077686,ENSMUST00000109128 3 3 5 83 11 50724368 50725789 CAGCTCAGGAGTTACTGAC 59 50724303 50724322 TCCTCTGTGCAGAATATAGC 58 NA InUTR Mus musculus 50 4933407P14Rik ENSMUSG00000049506 ENSMUST00000059448 2 1 2 203 11 104049225 104049243 CTTAGTGTCCAGCACTCTG 59 104049410 104052048 AAATCTTCCTCAGGCATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rap2c ENSMUSG00000050029 ENSMUST00000053593 2 1 1 82 X 48368193 48368214 GATCAGTGTTGTACAACTTGTG 59 48359912 48368152 CCTCTGAGTTTGTAATCTGCT 59 NA InUTR Mus musculus 50 Mrgprg ENSMUSG00000050276 ENSMUST00000058092 1 1 1 60 7 150951069 150951087 AGTTGGCTTCTCTATTGCT 58 150951027 150951045 GACTGGGAAGTAGAGTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 C130071C03Rik ENSMUSG00000050334 ENSMUST00000052354 1 1 1 60 13 83879619 83879638 TTGGTAGCTGCTATGTACTG 59 83879660 83879679 ATCATGGCCAGATTAAACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Hoxd10 ENSMUSG00000050368 ENSMUST00000061745 1 1 1 113 2 74530669 74530687 TAAAGTCTCCCAAGTGGAG 58 74530764 74532148 TCTTTGCTTTCCTTCTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Prokr2 ENSMUSG00000050558 ENSMUST00000110156,ENSMUST00000049997 3 2 3 82 2 132206955 132206973 CAACTACCTTCGTACGGTC 59 132199810 132206910 GGACAATAGCGAGGTATCTG 59 NA Mus musculus 50 Olfr125 ENSMUSG00000050613 ENSMUST00000050255 1 1 1 60 17 37972741 37972760 GCAATGGACCTCATATTCTC 58 37972783 37972801 TGAGTGGATTGAGTGTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ntng1 ENSMUSG00000050836 ENSMUST00000051253 3 1 1 121 3 109946871 109946889 TTGTCCTAGTAGCTGGAGG 59 109946768 109946786 TACACTACCTCGAGACCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Eml5 ENSMUSG00000051166 ENSMUST00000065716 2 1 1 80 12 100098212 100098232 GTGCTACTTCTAAACGAAGAG 58 100097099 100098171 AGTCATAACCTCTGTAACCA 57 NA Mus musculus 50 EG208426 ENSMUSG00000051777 ENSMUST00000063263 3 1 1 90 3 67845169 67851166 TTTGCTTGAGAATCACCAG 57 67851219 67851238 TTTCACCTTTGATTCCAAGG 58 NA Mus musculus 50 Foxo6 ENSMUSG00000052135 ENSMUST00000102656,ENSMUST00000063846 3 2 2 158 4 119959501 119959519 GATCTACGACTGGATGGTC 58 119941705 119941723 ATCCACCATGAACTCTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Serpinb6c ENSMUSG00000052180 ENSMUST00000110273 1 1 2 80 13 33989358 33991141 AGATAACTCAGGCACTGTC 58 33989296 33989314 TGAGAAGTAACTGGAAGCC 58 NA Mus musculus 50 Zfp622 ENSMUSG00000052253 ENSMUST00000061875 1 1 1 95 15 25921307 25925865 GATACTTCCTTCTGGTGCC 59 25925924 25925942 TTCCTAGCAACTGTCACAG 59 NA Mus musculus 50 Mrgpra6 ENSMUSG00000052303 ENSMUST00000073793 1 1 1 60 7 54444631 54444649 GAAACGCCATTGTGTTCTG 59 54444589 54444607 TAGATTGAGAAGGCGTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 B630019K06Rik ENSMUSG00000052364 ENSMUST00000064196 3 1 1 129 X 8470683 8470701 GTTCCTTCATTGAAGCCAC 59 8470794 8470812 TCTCTAAGGAATTCGCAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Traf7 ENSMUSG00000052752 ENSMUST00000088464,ENSMUST00000070777 3 2 2 83 17 24649010 24649029 GTACTGGATGAGAACCAGAG 59 24648758 24648964 AGACAGCTCATCATTCAGC 59 NA Mus musculus 50 2310034G01Rik ENSMUSG00000053043 ENSMUST00000065266 1 1 1 153 19 46423203 46423221 GAGTTATTGCTGAACCGTG 58 46423068 46423086 CTCAGCTTTGTAAAGAGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cpsf3 ENSMUSG00000054309 ENSMUST00000067284 3 1 1 80 12 21318166 21318185 ACAGAAGGTCTCTAAGAAGC 58 21318226 21319645 TCTTCTCCAAATATGTCCTGG 59 NA Mus musculus 50 2610204G22Rik ENSMUSG00000054514 ENSMUST00000067628 2 1 1 61 4 155135879 155135899 TTACTTAGGTCAGAGACTTGG 58 155135922 155135940 CAATCGTAGCAGAATGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hmgb2 ENSMUSG00000054717 ENSMUST00000067925 1 1 1 82 8 59991537 59991868 AGATGGAAGACCATGTCTG 58 59991914 59991932 ATCTCCCTGTCATAACGAG 58 NA Nonspecific Mus musculus 50 Msra ENSMUSG00000054733 ENSMUST00000067927,ENSMUST00000089333 1 2 2 85 14 65072355 65072374 GTGGAAAGACAATTGTGGTC 59 65071303 65072307 TTCCTCGAAGAGTGTTCAG 58 NA InUTR Mus musculus 50 Mtnr1a ENSMUSG00000054764 ENSMUST00000067984 2 1 2 88 8 46154674 46154692 CATCTTTACCATCGTGGTG 58 46154744 46172556 TATTCCCTGAGTTCCTGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Vmn2r81 ENSMUSG00000055515 ENSMUST00000020547 3 1 1 91 10 78733397 78733415 GTACATTTGTTCCCAGTGC 59 78733467 78737353 GTGAGGAATCTCTGTAAATCCT 59 NA Mus musculus 50 Olfr307 ENSMUSG00000055610 ENSMUST00000069279 3 1 1 60 7 93484061 93484079 TATACTGTGTTGCCTCCAG 58 93484019 93484037 TCACATCAGTGTTCCTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cdca7 ENSMUSG00000055612 ENSMUST00000102691 2 1 2 272 2 72317074 72319754 TTTGCAAACACAAGACTGC 59 72319990 72320488 AAGCATTGCTTTGTTCTGC 59 NA DesignRelaxed Mus musculus 50 Ces6 ENSMUSG00000055730 ENSMUST00000034346 1 1 1 80 8 107264169 107264671 ACATGAATTTGGACCTCAC 57 107264715 107264733 CATTTCTTGCGAAATTGGC 58 NA Mus musculus 50 Pgpep1 ENSMUSG00000056204 ENSMUST00000070173 1 1 1 260 8 73181374 73183521 GTAGTGGTAACCGGATTCG 59 73175236 73175254 TTTGTAACCCTTGTTGTGC 58 NA DesignNoJunction Mus musculus 50 Pard6g ENSMUSG00000056214 ENSMUST00000070219 1 1 1 287 18 80243826 80243844 ATAAGTCTCAGACCCTACG 57 80276777 80313716 CTGCTTCTTCTCGTTTCTG 58 NA DesignRelaxed Mus musculus 50 Pign ENSMUSG00000056536 ENSMUST00000070699,ENSMUST00000073314,ENSMUST00000112808,ENSMUST00000112806 1 4 4 83 1 107454659 107462734 TAAGCACTGGGTATGAAGC 59 107454594 107454612 GAAGGGTCTCTTGTTCCAC 59 NA Mus musculus 50 Cspp1 ENSMUSG00000056763 ENSMUST00000071087,ENSMUST00000088641 3 2 2 81 1 10054427 10054445 CTACTGGTGAAACAGACCC 59 10054489 10055417 AGTTTCAATCTTTCCTTGGC 58 NA Mus musculus 50 Pcbp2 ENSMUSG00000056851 ENSMUST00000077037,ENSMUST00000078404,ENSMUST00000108838 3 3 3 81 15 102305052 102305070 TTATCACTTTGGCTGGACC 59 102305114 102309057 CTGCTTATGTCCTCTTCCAG 59 NA Mus musculus 50 Nxf3 ENSMUSG00000057000 ENSMUST00000080929 2 1 1 80 X 132609302 132609882 TCAAGGAAGTGGACAACAG 59 132609240 132609258 CTGAACTGTTGTCATGGGT 59 NA Mus musculus 50 1700007G11Rik ENSMUSG00000057816 ENSMUST00000080333 3 1 1 81 5 98927331 98927349 AGCTGCATGATGATTTCCT 59 98927393 99166601 ATGAAGATCACTGTGCTCAG 59 NA Mus musculus 50 Gda ENSMUSG00000058624 ENSMUST00000087600 2 1 1 80 19 21500097 21502977 AGAGTTGTTAGGAGAACACTG 59 21500037 21500055 GATCAGGGATGAGTCAGTG 59 NA Mus musculus 50 EG624681 ENSMUSG00000058762 ENSMUST00000114163,ENSMUST00000075483 2 2 2 112 17 34651004 34651022 TTCAGAAGGGAACGTTCTG 59 34650703 34650930 ATGAGTGCATCAATAGTCCTC 59 NA Mus musculus 50 Lilrb3 ENSMUSG00000058818 ENSMUST00000078451,ENSMUST00000049747 2 2 2 80 7 3665819 3665838 TAACCAGGAAAGGAGAACTC 58 3665460 3665703 CCTCCACTGAAGCATATAGG 59 NA Mus musculus 50 Olfr1413 ENSMUSG00000058904 ENSMUST00000074859 1 1 1 60 1 94470360 94470378 TTGTCATGTTTGGCATCTG 58 94470402 94470420 GAGATCAGGACCACAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2700086A05Rik ENSMUSG00000059723 ENSMUST00000071583 3 1 1 74 6 52150869 52150887 GTCCAAACCACAAGTTCTC 58 52150813 52150831 ATAAACTCAAGAGGCGAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rgs3 ENSMUSG00000059810 ENSMUST00000065870,ENSMUST00000098031,ENSMUST00000107424,ENSMUST00000084521,ENSMUST00000107428,ENSMUST00000107430 1 6 10 115 4 62287552 62292162 TACAATCCCTGAAGAACCG 58 62292241 62292259 CTTGGTAGTTACTGTGGCC 59 NA Mus musculus 50 Serpinb12 ENSMUSG00000059956 ENSMUST00000081277,ENSMUST00000112724,ENSMUST00000078313 3 3 3 80 1 108845767 108845786 GAAAGCAAAGCTTCTGACAG 59 108845828 108846153 ATTTGTAGATTCACCCTGCT 59 NA Mus musculus 50 Olfr372 ENSMUSG00000061561 ENSMUST00000074540 1 1 1 60 8 74624480 74624498 GTATCCCTCTTCTACAGCC 58 74624521 74624540 TTCTCAAGCTGTAGATGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG13909 ENSMUSG00000062181 ENSMUST00000074403,ENSMUST00000093221 1 2 2 82 8 107614672 107615416 CTTGGCCATTATGGAAGTG 58 107615462 107615480 TAGCTGATTGATCTGAGCC 58 NA Mus musculus 50 9430002A10Rik ENSMUSG00000062704 ENSMUST00000074808 2 1 1 60 8 90698590 90698609 TGTCCTTTAGAAATGTTGCC 58 90698632 90698650 TTCTTAGGGCTTCCATTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 9130023H24Rik ENSMUSG00000062944 ENSMUST00000078816 3 1 1 60 7 135380653 135380671 TCAAGTGTAGGGATTGTGG 58 135380611 135380632 CTTTGATGGTGAATGAGATCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr538 ENSMUSG00000066125 ENSMUST00000084457 2 1 1 104 7 147760553 147760571 CATTCTGTGGTCCAAAGGT 59 147760639 147760657 CCACAAGAGTCATAACGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Akap13 ENSMUSG00000066406 ENSMUST00000065516,ENSMUST00000098366,ENSMUST00000026851 3 3 4 80 7 82832180 82832199 ATGACAATCAGTCATCCTGG 59 82840542 82842197 TTCTGTTATACTCTCGGTCAG 58 NA Mus musculus 50 V1rg9 ENSMUSG00000066805 ENSMUST00000086232 2 1 1 60 7 12845356 12845375 TATCCATAGTGCTCAACACC 59 12845315 12845335 GATAGTTTGTGTAGCTCTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ssxb10 ENSMUSG00000068219 ENSMUST00000103003 1 1 1 81 X 7908707 7909337 GAATGAAGCTGACATCAGTG 58 7909380 7909399 GCCAAGTTGGAATCATTCTC 59 NA Nonspecific Mus musculus 50 Olfr1189 ENSMUSG00000068808 ENSMUST00000090700 1 1 1 60 2 88432171 88432191 CTTACTCTTCTGTCATTGCTC 58 88432211 88432231 ACAATAGTCCTCTCAGAAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Aurkc ENSMUSG00000070837 ENSMUST00000086248 3 1 1 80 7 6950301 6950320 GGAGGAGAGCTCTATAAGGA 59 6950360 6952707 TGACAACTCCTGTATTATCGTG 59 NA Nonspecific Mus musculus 50 Tgfbrap1 ENSMUSG00000070939 ENSMUST00000095014,ENSMUST00000114756 2 2 2 61 1 43132288 43132306 ATTGTCAAGGAAGTGTCCA 58 43132245 43132263 AAGAAATAGCCATCCACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Trim6 ENSMUSG00000072244 ENSMUST00000098180,ENSMUST00000097023 1 2 2 80 7 111376826 111376844 CACTGAAGGACCTCATCTC 59 111376888 111379257 TAACATCACCCACATCCTG 58 NA Mus musculus 50 C230055K05Rik ENSMUSG00000072774 ENSMUST00000071978 2 1 1 99 5 105242831 105244026 CCTTTGAGTGTAACCATTGTG 59 105242752 105242770 TGGGTACATGCATAGTGTC 59 NA Mus musculus 50 2610030H06Rik ENSMUSG00000073131 ENSMUST00000114577,ENSMUST00000114578,ENSMUST00000114576,ENSMUST00000114575 3 4 5 107 X 69065508 69066153 TATTTGAAGGTGCCCTTGG 59 69066224 69066242 AGGCCACATAGACAAACAG 59 NA Nonspecific Mus musculus 50 Vps13d ENSMUSG00000073719 ENSMUST00000097796 2 1 1 60 4 144563011 144563029 GACAAAGTCCAACGATCCA 59 144562969 144562987 AACTTAAGCGGAAACAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 5730409E04Rik ENSMUSG00000073755 ENSMUST00000097886 1 1 1 60 4 126289045 126289064 AAGGATGCCAATAAGAACTG 57 126289084 126289105 TCCTTATCAGAATAGGATCCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr689 ENSMUSG00000073907 ENSMUST00000098153 2 1 1 60 7 112462697 112462717 CTGCATCAGTCAATGTATCAG 58 112462739 112462757 TAGCCAAACCAATATCCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 2410076I21Rik ENSMUSG00000074269 ENSMUST00000098674 2 1 1 106 9 58500906 58505574 ATCGAGCTCAGTCTATCCT 59 58500818 58500836 ATCCATGAGACATAAGCGT 58 NA Mus musculus 50 ENSMUSG00000074373 ENSMUSG00000074373 ENSMUST00000098808 3 1 1 127 9 46051577 46051596 CTTGATTTCCTCCCTACGTC 59 46051469 46051487 CTTGAGGACACATGTCCTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 OTTMUSG00000001088 ENSMUSG00000074594 ENSMUST00000109335,ENSMUST00000099095 2 2 2 74 2 164477230 164477248 ATCGTCCTCACTGTATCTG 58 164476116 164477192 TTCAAGGTCATCCTTGAGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 5530400B04Rik ENSMUSG00000074647 ENSMUST00000029143 2 1 1 83 2 155656341 155656681 CAGTTACAGCTTCACTTGG 58 155656276 155656295 TCAAAGTCTTCCACAATGTG 58 NA Mus musculus 50 Ube2n ENSMUSG00000074781 ENSMUST00000099329 1 1 1 87 10 95004078 95004283 TTTGAAAGATAAGTGGTCCC 57 95004333 95004351 ATCATCTGGATTAGGAGCA 57 NA Nonspecific Mus musculus 50 Qser1 ENSMUSG00000074994 ENSMUST00000099655 3 1 1 85 2 104620150 104620168 TTGAAAGTGGAGGTGAAGG 59 104618402 104620103 TAAAGCCTCCTTAAAGGTCTC 59 NA InUTR Mus musculus 50 Olfr1243 ENSMUSG00000075084 ENSMUST00000099775 3 1 1 66 2 89368506 89368524 CCTTACTCAAGATCCTGCT 58 89368458 89368477 TGTCACAATGTAGGTAAGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1221 ENSMUSG00000075102 ENSMUST00000099795 1 1 1 60 2 88952296 88952314 CTATGACCGTTATGTGGCT 59 88952254 88952272 CCTCTTGCTCATAATGGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1220 ENSMUSG00000075103 ENSMUST00000099796 2 1 1 60 2 88937415 88937435 CTATGGTGTCATCTTGTTCTC 58 88937375 88937393 AAGAGCTTTAAGTCGTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG621954 ENSMUSG00000075278 ENSMUST00000100002 3 1 1 75 19 4712520 4712539 CTCTTCCAGACTCTTCTCTG 58 4712464 4712482 ATCGCTGTGAAGATTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Krt76 ENSMUSG00000075402 ENSMUST00000100179 3 1 1 91 15 101717786 101717804 AGCTCATGAATGTCAAGCT 59 101716165 101717731 AAACTCTCCAGACAACCTG 59 NA Mus musculus 50 EG654465 ENSMUSG00000075573 ENSMUST00000100492 3 1 1 63 14 63616984 63619727 ATGATGCTGAGAGGAAAGG 59 63619753 63619772 TTCCTTTCAACGAAATGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV17-127 ENSMUSG00000076508 ENSMUST00000103309 1 1 1 102 6 67811192 67811367 CTCCTCTATTCTAGGGCAG 57 67811433 67811451 TATCAGTGCTGGTTATGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-78 ENSMUSG00000076542 ENSMUST00000103343 2 1 1 106 6 69009976 69010172 CAGTCATAATGTCCAGAGGA 58 69009889 69009907 TACACTTGATCTGGCACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV2-7 ENSMUSG00000076647 ENSMUST00000103456 3 1 1 61 12 115045705 115045725 CTATGGTGTACATTGGTTTCG 59 115045664 115045683 ATATTCCTCCCAACCATTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-69 ENSMUSG00000076712 ENSMUST00000103521 3 1 1 61 12 116358023 116358041 CTGTAGACACATCCTCCAG 58 116357980 116357998 AGAGTCCTCAGATGTCAGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRAV6D-4 ENSMUSG00000076768 ENSMUST00000103577 2 1 1 65 14 53373403 53373421 AACAAGGGAATCAGCAGAG 59 53373450 53373468 CTGTAAGTGGAAGGAGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAJ18 ENSMUSG00000076911 ENSMUST00000103723 3 1 1 60 14 54820455 54820473 ATAGAGGTTCAGCCTTAGG 57 54820497 54820515 GGTATGACAATCAGCTGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Q8CAQ2_MOUSE ENSMUSG00000078102 ENSMUST00000104901 2 1 1 239 16 4869333 4869351 CTCTTAGGAAGCACCATCC 59 4869112 4869130 TTTACTCACTCCCTCACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 C730025P13Rik ENSMUSG00000078201 ENSMUST00000104998 2 1 1 80 2 25111395 25111413 TTCGACTCTTCCAAGATGG 58 25111457 25111475 CAAACTTGAGGCTAAGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 AU022252 ENSMUSG00000078584 ENSMUST00000046260 1 1 1 89 4 118899126 118899417 ATTTCTCCAGAGGAATGGG 58 118899055 118899073 TTCATATGGAGTCCACGAC 58 NA Mus musculus 50 NP_001074669.1 ENSMUSG00000078657 ENSMUST00000107300 1 1 1 73 3 92950853 92950871 GTTTGCTGACGTCATAGTG 58 92952005 92952023 TATCTTCATCCAACAGGCG 59 NA DesignNoJunction Mus musculus 50 Zfp59 ENSMUSG00000078779 ENSMUST00000108332,ENSMUST00000108331 2 2 2 75 7 28631461 28631479 CTAGAGCAGGAGAAAGAGC 59 28631518 28638417 AATCTGCCTCCAAATCTGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 MGI:1922798 ENSMUSG00000078782 ENSMUST00000053562 3 1 1 64 7 28231061 28231079 CCAAGTATCCTCCATTGGG 59 28231015 28231034 TGTGCTTTGATTTCCTTTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ube2v1 ENSMUSG00000078923 ENSMUST00000109207 3 1 2 112 2 167443414 167443432 AAGGACAGAAAGGAGTAGG 57 167435921 167443338 ATAGATTGTTCGTGGAGGT 57 NA Nonspecific Mus musculus 50 Nhlh1 ENSMUSG00000079182 ENSMUST00000111262 3 1 1 121 1 173987494 173987512 CAGACAGATGACCCTTGAG 59 173984573 173984591 TCCATGGTCAAGATTCCAG 58 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zfx ENSMUSG00000079509 ENSMUST00000088102,ENSMUST00000113927,ENSMUST00000113926 1 3 4 80 X 91327627 91343629 GATCTCTTTGGATGATGCTG 58 91327566 91327584 GGGTCAATTTCTGTTTCGT 58 NA Mus musculus 50 A230106D06Rik ENSMUSG00000079573 ENSMUST00000095946 3 1 1 169 6 47895673 47895691 TGCATGAAGAACCTCATGG 59 47895955 47898904 TCAGAGAAATACCCAGGGA 59 NA InUTR Mus musculus 50 NP_001098021.1 ENSMUSG00000080312 ENSMUST00000116660 2 1 1 68 17 19517143 19517162 TCAGCAGTTGTGTTTATCTG 58 19517193 19519480 ACAGACTGAGGGATCTCTG 59 NA DesignRelaxed Mus musculus 50 NP_001098013.1 ENSMUSG00000080314 ENSMUST00000116663 1 1 1 97 17 18390268 18390286 TTCAGAACAGTAACCCAGC 59 18381453 18390208 CACTGGTCTACATCTGTCTC 59 NA Mus musculus 50 Scml2 ENSMUSG00000000037 ENSMUST00000101113,ENSMUST00000087090,ENSMUST00000112348,ENSMUST00000074802,ENSMUST00000112345,ENSMUST00000112342,ENSMUST00000019101,ENSMUST00000077375 2 8 8 60 X 157615240 157615979 TTTCAGACAGTCTAAGACTCC 58 157616001 157616019 GGCTTCCAATTTCATACCA 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Th ENSMUSG00000000214 ENSMUST00000000219 1 1 2 89 7 150083931 150083949 AAATGCTGTTCTCAACCTG 58 150082997 150083879 GCTTCAAATGTCTCAAACAC 57 NA Mus musculus 50 Tpd52l2 ENSMUSG00000000827 ENSMUST00000108799,ENSMUST00000108801 2 2 6 80 2 181245226 181246288 AATCCTTTAGCAGCTACTCC 59 181247752 181247772 CTTCAAATGACTTGAAGGTGG 59 NA Mus musculus 50 Mapk7 ENSMUSG00000001034 ENSMUST00000079080,ENSMUST00000108714,ENSMUST00000101085,ENSMUST00000116369,ENSMUST00000094119,ENSMUST00000101086 3 6 6 83 11 61306457 61306476 AAACACGACAATATCATCGC 58 61305176 61306414 CAGTACCACATAGACAGATCTG 59 NA Mus musculus 50 Lsr ENSMUSG00000001247 ENSMUST00000098553 2 1 4 80 7 31744324 31750997 ATTGTCCTTGTTTATGCTGC 59 31744263 31744281 GAGGTGGGTATAGATGCTG 58 NA Mus musculus 50 Lsr ENSMUSG00000001247 ENSMUST00000098553 3 1 4 80 7 31744324 31750996 TTGTCCTTGTTTATGCTGC 58 31744262 31744280 AGAGGTGGGTATAGATGCT 59 NA Mus musculus 50 4933413G19Rik ENSMUSG00000001517 ENSMUST00000112148 2 1 2 110 6 128321003 128321022 ATGACATGTTTGTTCGAGAG 58 128321095 128322561 GTTTCTGCTGCTTAAACAC 57 NA Mus musculus 50 Top3a ENSMUSG00000002814 ENSMUST00000101115 1 1 3 93 11 60559332 60559350 GATATGGTCCTCAAGACCA 58 60555805 60557514 AACAACAAGGAAACCACAC 58 NA InUTR Mus musculus 50 Dgcr6 ENSMUSG00000003531 ENSMUST00000076757,ENSMUST00000066027 3 2 2 60 16 18070293 18070311 TAGCTGGTTTCTACGTGAC 59 18070981 18070999 TCCAATAGGTTCATCTGCA 58 NA DesignNoJunction Mus musculus 50 Apba3 ENSMUSG00000004931 ENSMUST00000057798,ENSMUST00000099453 3 2 2 80 10 80735688 80735797 TCACAGAGACAAGAGAAATCC 59 80735839 80735857 ATACTGGTTGTTCCTGTCC 58 NA Mus musculus 50 Slc1a2 ENSMUSG00000005089 ENSMUST00000080210,ENSMUST00000111206,ENSMUST00000111212,ENSMUST00000111211 1 4 7 94 2 102617728 102617746 TTACGACGACAAGAACCAC 59 102617804 102621629 CCAGAGTTACCTTGCACTC 59 NA Mus musculus 50 Sqrdl ENSMUSG00000005803 ENSMUST00000005953,ENSMUST00000110506 3 2 2 82 2 122613293 122613313 CAGTGGATTCAAGATAGAGTG 57 122613357 122618096 CTGTAGGAGATCTCCTTGC 58 NA Mus musculus 50 Spo11 ENSMUSG00000005883 ENSMUST00000050442 1 1 3 105 2 172807593 172809534 TGTTTGATGATTCTGTCGG 57 172809603 172810388 ACTTTCAGAATCAGAGCGA 58 NA Mus musculus 50 Nelf ENSMUSG00000006476 ENSMUST00000116574,ENSMUST00000114388,ENSMUST00000114386,ENSMUST00000114392,ENSMUST00000100334,ENSMUST00000006646,ENSMUST00000102931,ENSMUST00000074422,ENSMUST00000114381 3 9 9 82 2 24916585 24916603 CCTGGACACCTTTATTTGC 58 24916648 24916790 TTCCAGAAGTGGATCATGTC 59 NA Mus musculus 50 Met ENSMUSG00000009376 ENSMUST00000115443,ENSMUST00000115442,ENSMUST00000080469 1 3 3 80 6 17498826 17499038 GAGAAAGCATAAAGATCTGGG 58 17499077 17499098 CTTACAAGCCTATCCAAATGAG 58 NA Mus musculus 50 A730008L03Rik ENSMUSG00000013465 ENSMUST00000114367,ENSMUST00000095127,ENSMUST00000059849 3 3 3 80 2 25058708 25058728 ATACTACGTCCTACACATCAC 58 25056694 25058666 CCAAACGTTTCCACAAGTC 59 NA Mus musculus 50 Hmgb3 ENSMUSG00000015217 ENSMUST00000072699,ENSMUST00000015361,ENSMUST00000088874,ENSMUST00000114582 2 4 4 97 X 68812439 68812853 TATGAGAAGGATGTTGCTGAC 59 68812912 68812930 TCTTCCTCTTCTTCCACCT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Lama5 ENSMUSG00000015647 ENSMUST00000087542 2 1 2 91 2 179917123 179917141 CTTCATAATGTCTGGGCCA 59 179916134 179917069 TGAACTCCAATACTCGTGTC 59 NA Mus musculus 50 Nbr1 ENSMUSG00000017119 ENSMUST00000103099,ENSMUST00000103098,ENSMUST00000107208,ENSMUST00000107212,ENSMUST00000071537,ENSMUST00000107219,ENSMUST00000093932,ENSMUST00000107203 3 8 11 82 11 101433816 101433835 TTTAATAGAGAAGCCAGGCT 58 101433880 101434133 ATACAGTGGAATCAGGAGG 58 NA Mus musculus 50 Abr ENSMUSG00000017631 ENSMUST00000108408,ENSMUST00000072740,ENSMUST00000108407,ENSMUST00000094012,ENSMUST00000040910 2 5 7 81 11 76286040 76286059 TATAAAGTCGCTCTGGAGAC 58 76282266 76285997 TCACTTTGAGTTCCTCAGAG 58 NA Mus musculus 50 Eya2 ENSMUSG00000017897 ENSMUST00000103082 3 1 4 117 2 165513132 165513151 AGACAGTTTGAATCACTCCC 59 165513231 165550187 TGTGTTGTAGTCTCTGTGC 59 NA Mus musculus 50 Mapt ENSMUSG00000018411 ENSMUST00000018555,ENSMUST00000100347,ENSMUST00000106993,ENSMUST00000106992,ENSMUST00000106991,ENSMUST00000106987,ENSMUST00000078906,ENSMUST00000106989,ENSMUST00000106988 3 9 10 80 11 104171782 104171801 CCTAAAGAATGTCAGGTCGA 59 104171843 104179484 TTAATTATCTGCACCTTGCC 58 NA Mus musculus 50 Sp2 ENSMUSG00000018678 ENSMUST00000107626,ENSMUST00000107624,ENSMUST00000107623,ENSMUST00000062652 3 4 4 60 11 96822376 96822395 CTCAGAACTTTCAGATCCAG 57 96819034 96822354 GGTGTACGGATATAAACCTG 57 NA DesignRelaxed Mus musculus 50 Rad51l3 ENSMUSG00000018841 ENSMUST00000018985,ENSMUST00000092844,ENSMUST00000021033,ENSMUST00000100718 1 4 4 60 11 82692694 82692712 TATGTCTGACCAAGTCTCC 57 82692491 82692510 GTCCCAATGTCTATCATCTC 57 NA DesignNoJunction Mus musculus 50 Atp6v0a1 ENSMUSG00000019302 ENSMUST00000103110,ENSMUST00000092663 2 2 4 111 11 100909739 100909757 TCAACTTTGGTGGGATCAG 59 100909831 100916350 CCAAAGTCAAACTCTTCTGC 59 NA Mus musculus 50 Tlcd1 ENSMUSG00000019437 ENSMUST00000092880,ENSMUST00000092879,ENSMUST00000098545 3 3 4 81 11 77993112 77993455 TCATCATGTCATGGCTATGG 59 77993499 77993517 CAGTAGTGTTAAGACGCCA 59 NA Mus musculus 50 Slc17a8 ENSMUSG00000019935 ENSMUST00000020102,ENSMUST00000099372 2 2 2 164 10 89063062 89069335 AACCAGAAATTCAGACAGC 57 89061465 89061483 TTGATGTCAAGAAGATGGC 57 NA Mus musculus 50 Xbp1 ENSMUSG00000020484 ENSMUST00000109866,ENSMUST00000063084 3 2 2 95 11 5422014 5423347 GAAGAAGAGAACCACAAACTC 58 5423404 5423422 CAAGCGTGTTCTTAACTCC 58 NA Mus musculus 50 OTTMUSG00000001265 ENSMUSG00000020486 ENSMUST00000084575,ENSMUST00000107962,ENSMUST00000107960,ENSMUST00000018544,ENSMUST00000096206 3 5 9 80 11 87397104 87397428 TGATTCCTCTGAGGATGAC 58 87397472 87397490 CCTTTCTTCACAGACTTCC 57 NA Nonspecific Mus musculus 50 Tubd1 ENSMUSG00000020513 ENSMUST00000020821,ENSMUST00000108030 1 2 3 91 11 86368794 86370204 AGAAATCCACTAGACTCTGGA 59 86370257 86370275 AAAGATAGGTTGGTGGCAG 59 NA Mus musculus 50 Mboat2 ENSMUSG00000020646 ENSMUST00000078902 1 1 4 81 12 25567594 25567613 CTTTCTTGTACAAAGTGGGA 57 25567657 25619447 AATGATCATCATTGGGTGC 58 NA Mus musculus 50 Cbll1 ENSMUSG00000020659 ENSMUST00000064240 1 1 3 80 12 32172844 32172863 TATAATCAGCCACATGAGGA 57 32172318 32172801 TTCAGTAAACGAACGAGGT 58 NA Mus musculus 50 Cbll1 ENSMUSG00000020659 ENSMUST00000085487 1 1 3 84 12 32172379 32172433 CACCTTATCATGGTGGTCC 59 32172313 32172331 TGGTCTTCAGTAAACTGGG 58 NA Mus musculus 50 Rab37 ENSMUSG00000020732 ENSMUST00000067754 3 1 2 92 11 115007884 115007902 GGAAGACATCTCTACTGGT 57 115007957 115019274 CCACTTTATTTGTGAATCCG 57 NA Mus musculus 50 Acox1 ENSMUSG00000020777 ENSMUST00000072948,ENSMUST00000066587,ENSMUST00000021129 2 3 3 110 11 116040155 116040936 TGAAATCAAGAGAAGCGAG 57 116040063 116040081 TATCTTCCGAGAAAGTGGA 57 NA Mus musculus 50 Dvl2 ENSMUSG00000020888 ENSMUST00000102575,ENSMUST00000019362 3 2 2 81 11 69821891 69821912 CCGTCAACAAGATTACTTTCTC 59 69821951 69822288 TTAACTAGGTAACTCTCACAGC 59 NA Mus musculus 50 Usp43 ENSMUSG00000020905 ENSMUST00000108677,ENSMUST00000021288,ENSMUST00000108676 3 3 3 101 11 67712459 67712477 TCTTCCTTGACTTGTCCAC 59 67710849 67712394 ACTCAAGAATCTCGTCTGG 58 NA Mus musculus 50 Numb ENSMUSG00000021224 ENSMUST00000110298 3 1 3 83 12 85152306 85172886 AAGAGATTGAAAGCTACGGG 59 85152242 85152260 TTTCTCGTCCACAACTCTG 59 NA Mus musculus 50 Klc1 ENSMUSG00000021288 ENSMUST00000084941,ENSMUST00000069328,ENSMUST00000084942,ENSMUST00000021717 2 4 4 83 12 113015175 113015193 GATCTGGAGAAGACTTCCG 59 113015240 113016240 GTTCTGATCCCTGTACACC 59 NA Mus musculus 50 9330134C04Rik ENSMUSG00000021470 ENSMUST00000021926,ENSMUST00000095724,ENSMUST00000109778,ENSMUST00000067821 2 4 7 80 13 63945986 63948658 TGTTACAAGACCAACTCAC 57 63948701 63948720 GTTAGCTACTTTCTGAAGCA 57 NA Mus musculus 50 Map3k1 ENSMUSG00000021754 ENSMUST00000109267,ENSMUST00000022274 3 2 2 80 13 112547005 112547315 AATACTTAAAGCTGGGTCCA 58 112546944 112546963 TTTGATTCAGCTTGGTTTCC 58 NA Mus musculus 50 Ktn1 ENSMUSG00000021843 ENSMUST00000089901,ENSMUST00000022391,ENSMUST00000111745,ENSMUST00000111744,ENSMUST00000111743,ENSMUST00000070762 2 6 6 105 14 48323863 48323883 ATCCATGAGAAAGATGGACAG 59 48323950 48325453 GAGAAGTGACAGACAGCTG 59 NA Mus musculus 50 Ywhaz ENSMUSG00000022285 ENSMUST00000022894,ENSMUST00000110362,ENSMUST00000110361 3 3 4 99 15 36706071 36706089 GCAACCAGAAAGCAAAGTC 59 36705324 36706010 GTCCACAATTCCTTTCTTGTC 59 NA Nonspecific Mus musculus 50 Tnfrsf17 ENSMUSG00000022496 ENSMUST00000023140 3 1 1 159 16 11315363 11315381 TTGCTGAGGAAGATGAACC 59 11319844 11319863 CTTCCACTGTATACTCCAGG 58 NA DesignNoJunction Mus musculus 50 Kif21a ENSMUSG00000022629 ENSMUST00000088614 3 1 6 88 15 90781795 90783152 GAACATAAACACTCAGATTCGG 59 90781728 90781746 ACATTCAGTTCGTTACGGG 59 NA Mus musculus 50 Gcet2 ENSMUSG00000022659 ENSMUST00000023339 3 1 2 153 16 45610665 45616073 GACAACCAGATACTTCAGG 57 45618953 45619948 ATTAGCATTGTCCTGAACG 57 NA Mus musculus 50 Aifm3 ENSMUSG00000022763 ENSMUST00000115685,ENSMUST00000100128 1 2 3 80 16 17506356 17506374 CTACGATCCCATCGTATCC 58 17506418 17507000 ATAAACAACTCCACCTCCC 58 NA Mus musculus 50 Iqcb1 ENSMUSG00000022837 ENSMUST00000114819,ENSMUST00000023535 2 2 2 83 16 36847672 36847690 AAAGCTCCTGCTAGTACTG 58 36847734 36849722 CTTCTAAGTCCTTTATAGCAGG 57 NA Mus musculus 50 Robo1 ENSMUSG00000022883 ENSMUST00000114274 2 1 3 80 16 72936022 72956528 ACAGTTCAAGTTGGGTCTG 59 72956571 72956590 AAGAGAAGTTCCACTCACAG 59 NA Mus musculus 50 Gtf2ird1 ENSMUSG00000023079 ENSMUST00000111245,ENSMUST00000111244,ENSMUST00000100650 2 3 7 82 5 134839845 134851991 TTATCCCAAAGCCTGATGAG 59 134839782 134839800 ATTGAAGAGCTCCTTCACC 59 NA Mus musculus 50 Rps6ka2 ENSMUSG00000023809 ENSMUST00000024575,ENSMUST00000024619,ENSMUST00000097427 3 3 3 80 17 7451060 7451079 GGGTCAGATCTAAGATGGAG 58 7451122 7453649 TCTGAAAGGCATAATGCAG 57 NA Mus musculus 50 Brd4 ENSMUSG00000024002 ENSMUST00000003726 2 1 2 182 17 32359105 32361041 AAAGAAACAGGTAGGGCAG 59 32358941 32358959 CACCATTGTCATGACAGGA 59 NA Mus musculus 50 Epb4.1l3 ENSMUSG00000024044 ENSMUST00000112680 2 1 6 124 17 69611629 69611647 CAGAAGGAAGAAGGCTGAG 59 69619997 69623453 TAATCAGACTATTCTCCGTGG 58 NA Mus musculus 50 Brunol4 ENSMUSG00000024268 ENSMUST00000115816 1 1 3 86 18 25645459 25649592 TAAATGCTTTGGCTTCGTG 59 25645391 25645409 TTCATGCCTATCTGGAAGC 59 NA Mus musculus 50 Megf10 ENSMUSG00000024593 ENSMUST00000115370 3 1 2 83 18 57420869 57421649 ATGTATCTGTAAGGCAGGC 59 57421696 57421714 GTTAGGTTACAGCCAAAGC 58 NA Mus musculus 50 Cd6 ENSMUSG00000024670 ENSMUST00000113053 1 1 4 144 19 10865886 10865904 AGAACAGGTTTCAGATGCC 59 10864519 10865568 GCTTTGTCTTTGTTGTTCCT 59 NA Mus musculus 50 Esrra ENSMUSG00000024955 ENSMUST00000113432,ENSMUST00000025906 2 2 2 159 19 6986970 6986988 TGGTCCTAGATGAAGAGGG 59 6986485 6986847 TCAATGTGCACAGAGTCAG 59 NA Mus musculus 50 Sfxn3 ENSMUSG00000025212 ENSMUST00000062213,ENSMUST00000084493 2 2 3 84 19 45124396 45124727 CTTCTACAGGAAGACTCCG 58 45124773 45124793 GCTGCGATTAGAGTAATTCAC 59 NA Mus musculus 50 Bet1l ENSMUSG00000025484 ENSMUST00000026557 3 1 1 119 7 148041026 148041044 GAGGACATTCTGGACAGAG 59 148040673 148040691 TAAGTAACGGTTCTGGTCC 58 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Rhot2 ENSMUSG00000025733 ENSMUST00000043897,ENSMUST00000115063,ENSMUST00000026830 1 3 3 81 17 25977509 25977609 ACAGGCTATCACAGTTACC 58 25977446 25977464 CACCTTACACATGAGAACG 58 NA Mus musculus 50 D3Ertd751e ENSMUSG00000025766 ENSMUST00000108065,ENSMUST00000026867,ENSMUST00000026868 1 3 3 172 3 41550488 41550506 TACACTTGGGATGGTTTCC 59 41550639 41552604 GCTTCCACAACTTCATAATTCC 59 NA Mus musculus 50 Ube2w ENSMUSG00000025939 ENSMUST00000097819 3 1 2 83 1 16572063 16572081 ACGACCACCAGATAATTCC 59 16561354 16572018 CAAGTGTCATCATGATACCAC 58 NA Mus musculus 50 Ppil3 ENSMUSG00000026035 ENSMUST00000114348,ENSMUST00000081677,ENSMUST00000114345 1 3 3 82 1 58497738 58497758 GTAATTACTACAACGGCTGTG 59 58495245 58497694 TCTTCCAGTACCTGTTGGA 59 NA Mus musculus 50 Ppil3 ENSMUSG00000026035 ENSMUST00000114348,ENSMUST00000081677,ENSMUST00000114345 2 3 3 83 1 58491283 58495195 ATCTGAAGCACAATGTTCG 58 58491218 58491238 CATAGGTGATGAAGAACTGAG 57 NA Mus musculus 50 Plcd4 ENSMUSG00000026173 ENSMUST00000113749,ENSMUST00000113748,ENSMUST00000027362 1 3 7 80 1 74608504 74608640 CAAAGCAGTTTCTTCTCCTG 59 74608683 74608701 GGACAGTCCTCAAGTAGAC 58 NA Mus musculus 50 Speg ENSMUSG00000026207 ENSMUST00000087122,ENSMUST00000038230 3 2 3 81 1 75415626 75415644 AGGAGACTACGTTCCTGAG 59 75415689 75416812 GTAGGTCTCAGTCGATCCT 59 NA Mus musculus 50 Srgap2 ENSMUSG00000026425 ENSMUST00000032395 3 1 3 80 1 133191096 133191534 CTACAATCACAAGGAGCGA 59 133189338 133189356 GGAGTCAGTCAGAGAACTG 59 NA Mus musculus 50 Sdccag3 ENSMUSG00000026927 ENSMUST00000114102,ENSMUST00000114100,ENSMUST00000028293,ENSMUST00000077983,ENSMUST00000057204,ENSMUST00000114097 1 6 7 87 2 26240337 26240616 TAAATTTGCTTCAGGCCCA 59 26240268 26240286 TTCACTACAGAAAGGCTGG 59 NA Mus musculus 50 Lrp2 ENSMUSG00000027070 ENSMUST00000092551 2 1 3 112 2 69365653 69365671 GTGACCAGAAGTGTGAGAG 59 69365333 69365580 TTCAATACCTAGTAAGGAGTCG 58 NA Mus musculus 50 4930402H24Rik ENSMUSG00000027309 ENSMUST00000103190 2 1 6 167 2 130539231 130545586 ATTGTCACAAGGTATGAAGG 57 130538713 130538731 GTGGTAGATGTTTCCAGAG 57 NA Mus musculus 50 Stx16 ENSMUSG00000027522 ENSMUST00000044638,ENSMUST00000087908,ENSMUST00000094281 1 3 3 81 2 173919508 173919526 ATTGTGCAGTCCATTTCAG 58 173919571 173920576 TATCAAGGACTGTTCCCTG 58 NA Mus musculus 50 Epb4.1l1 ENSMUSG00000027624 ENSMUST00000103137,ENSMUST00000109577,ENSMUST00000109571,ENSMUST00000029155,ENSMUST00000103136,ENSMUST00000088565,ENSMUST00000103135 2 7 12 89 2 156350946 156350964 CCAAGAGGATGAATCTGGG 59 156351016 156352635 GCTTTCACAGACTCAAACTG 59 NA Mus musculus 50 Src ENSMUSG00000027646 ENSMUST00000109533,ENSMUST00000029175,ENSMUST00000109531 2 3 5 82 2 157284296 157284315 TATGACTATGAGTCACGGAC 58 157284359 157288454 TCTCCCTCTGTGTTATTGAC 58 NA Mus musculus 50 Rnpc3 ENSMUSG00000027981 ENSMUST00000092154,ENSMUST00000106536,ENSMUST00000106535 1 3 3 81 3 113322997 113323015 TACCAGATGAGGATGAGGA 58 113319783 113322952 CTGTTCATTCTCTGTCGGT 59 NA Mus musculus 50 F3 ENSMUSG00000028128 ENSMUST00000090417 2 1 2 96 3 121434534 121434552 AATGGTACATTCCTCACCC 58 121434612 121437033 ATGAGTGTTTCTTTCCCGT 59 NA Mus musculus 50 Gbp3 ENSMUSG00000028268 ENSMUST00000106222,ENSMUST00000029935,ENSMUST00000106221 1 3 3 80 3 142228336 142228354 TGGAGCTGAAGTTAAATGG 57 142228398 142229318 GATTGTCTCCTTGGATCAG 57 NA Mus musculus 50 1300002K09Rik ENSMUSG00000028327 ENSMUST00000107783,ENSMUST00000030011,ENSMUST00000095099 2 3 4 89 4 45870801 45871039 GAACCAGGCAGATAAATATCAC 58 45871088 45872820 AAATGATGCAGAGTGATGGA 59 NA Mus musculus 50 Elavl4 ENSMUSG00000028546 ENSMUST00000106598,ENSMUST00000106601,ENSMUST00000102722,ENSMUST00000106603,ENSMUST00000106600,ENSMUST00000106594,ENSMUST00000001387,ENSMUST00000102723,ENSMUST00000106597 2 9 9 255 4 109924108 109965240 GATAATTAGCACCATGGAGC 58 109899240 109923890 CCCTAAACTCTGTCCTGTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 2310009E04Rik ENSMUSG00000028573 ENSMUST00000107089 2 1 8 94 4 95264417 95266681 ACCATGAAGTTTCTCTGTG 57 95267706 95267724 CATTAATCCTGTGGACCTG 57 NA Mus musculus 50 Rad54l ENSMUSG00000028702 ENSMUST00000102705,ENSMUST00000102704 1 2 2 81 4 115772345 115772883 GCTGTGTAATCATCCAGCT 59 115772282 115772300 TGGGAAGATACCCAAAGTG 58 NA Mus musculus 50 Pla2g2e ENSMUSG00000028751 ENSMUST00000030531,ENSMUST00000105803,ENSMUST00000105804 2 3 3 102 4 138436672 138436691 TCGAGACAACATCTTCTGTG 59 138438394 138438412 GTAAGTGTTCAGGTTGTGG 58 NA DesignNoJunction Mus musculus 50 Tmem54 ENSMUSG00000028786 ENSMUST00000030577,ENSMUST00000106064 2 2 3 94 4 128785641 128787629 CCATTGTGGTCATTGTTGC 59 128787782 128787800 CACACTCAAGCTAAACACG 59 NA Mus musculus 50 Prkag2 ENSMUSG00000028944 ENSMUST00000114975,ENSMUST00000030784,ENSMUST00000076306,ENSMUST00000099290 1 4 4 196 5 24394987 24395324 AGAAGACTCAGAAAGTGGC 59 24384573 24386511 TGAGCATTCCTACAAAGCT 58 NA Mus musculus 50 Park7 ENSMUSG00000028964 ENSMUST00000105675,ENSMUST00000030805,ENSMUST00000105674,ENSMUST00000105676,ENSMUST00000105673,ENSMUST00000105677 1 6 6 98 4 150271571 150275125 TGAATGGCAGTCACTACAG 59 150271491 150271510 CTAGTGCAAACTCAAAGCTG 59 NA Mus musculus 50 Sdf4 ENSMUSG00000029076 ENSMUST00000105579,ENSMUST00000050078,ENSMUST00000105578 3 3 4 83 4 155382983 155383002 TTTCATTCCTTCACCCTGAG 59 155383048 155383264 CACCATCCTGATCCAAGTC 59 NA Mus musculus 50 Crmp1 ENSMUSG00000029121 ENSMUST00000087535 2 1 3 200 5 37669363 37669381 GTGATCTTAGTCCATGCAG 57 37670969 37677684 GACAATCTTGCTCATGACC 58 NA Mus musculus 50 Crmp1 ENSMUSG00000029121 ENSMUST00000114158,ENSMUST00000031004 1 2 3 91 5 37675426 37677614 AGCCATAAATCAACTGTGGA 59 37677668 37677686 AAGACAATCTTGCCCTGAC 59 NA Mus musculus 50 Aff1 ENSMUSG00000029313 ENSMUST00000100975,ENSMUST00000054979,ENSMUST00000031256 2 3 4 83 5 104263467 104270081 AAGAAGAGAAAGGGTGACC 58 104270128 104270146 AGATGAAGATGACGCAGTC 59 NA Mus musculus 50 Nos1 ENSMUSG00000029361 ENSMUST00000111939,ENSMUST00000102557 1 2 4 133 5 118364439 118365561 AAGAGGAGAGGAAGTACCC 59 118369405 118369423 GAATCGGACCTTGTAGCTC 59 NA Mus musculus 50 Recql ENSMUSG00000030243 ENSMUST00000111804 3 1 4 154 6 142312125 142312143 CCAGAGCTTGTCTTCTCAG 59 142308499 142311330 TGAAGAACCTGAAGCTGAG 59 NA Mus musculus 50 Itpr2 ENSMUSG00000030287 ENSMUST00000053273 2 1 3 104 6 146367008 146367027 AGATAAAGTCGTTCTGATGC 57 146366521 146366942 CAATTAACAGCATTCACCTC 57 NA Mus musculus 50 Fbxo17 ENSMUSG00000030598 ENSMUST00000108279 2 1 3 167 7 29520373 29520391 AGATCTGCATAGCTGACTG 58 29521217 29522696 ATCATGGTAGTCCTTGTCG 58 NA Mus musculus 50 Gp2 ENSMUSG00000030954 ENSMUST00000033255 1 1 2 80 7 126590708 126592502 AGTGTCAACCATCTTGCTC 59 126590646 126590664 GTCCTAAATCCAGAACCCG 59 NA Mus musculus 50 Gpm6b ENSMUSG00000031342 ENSMUST00000112235,ENSMUST00000112236,ENSMUST00000112233,ENSMUST00000060210,ENSMUST00000112228,ENSMUST00000112224,ENSMUST00000112223,ENSMUST00000112229,ENSMUST00000112227,ENSMUST00000112226,ENSMUST00000073975,ENSMUST00000112215 2 12 12 81 X 162813652 162813670 CACAAGTGCAGTGAAAGAG 58 162813715 162817931 GAGGAACACGAACATTCCA 59 NA InUTR Mus musculus 50 Rbbp7 ENSMUSG00000031353 ENSMUST00000033720,ENSMUST00000112326,ENSMUST00000112321 2 3 4 130 X 159206917 159207701 AGTGACAAGGGAGAATTCG 59 159207795 159207813 TTTGTGGCAATGATGTGAG 58 NA Mus musculus 50 L1cam ENSMUSG00000031391 ENSMUST00000114430,ENSMUST00000114433,ENSMUST00000066605,ENSMUST00000066576 2 4 7 123 X 71101505 71101523 TCCTCTGCTTCATCAAACG 59 71100597 71101107 TCATTGTCACTGTACTCGC 59 NA Mus musculus 50 Prame ENSMUSG00000031411 ENSMUST00000033786,ENSMUST00000113159 3 2 2 104 X 132149055 132149073 TTCCTCAACTATCTTGGGC 58 132148181 132148987 ATTAGGTGGTAAGGCTCTG 58 NA Mus musculus 50 Jak3 ENSMUSG00000031805 ENSMUST00000051995,ENSMUST00000110013,ENSMUST00000110012 2 3 3 79 8 74204626 74204644 TATTTCTGCAAGGAGGTGG 59 74204687 74204790 AAGTCTAACGTGATGGGTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Abcg4 ENSMUSG00000032131 ENSMUST00000034648,ENSMUST00000085979 1 2 2 80 9 44085631 44085748 GCTCACCTTTCCCTTAGAG 59 44085569 44085588 GCCAAGTAATAGGCTTTGAG 58 NA Mus musculus 50 Dyx1c1 ENSMUSG00000032210 ENSMUST00000034734 3 1 2 92 9 72809940 72811908 CACAAGAGGGAGGAATTGG 59 72811963 72811982 CTGATTTGAATACTGCCAGC 59 NA Mus musculus 50 Malt1 ENSMUSG00000032688 ENSMUST00000102868 1 1 2 82 18 65608600 65608618 GAAGGAACCTACTGGTGTC 59 65608663 65609238 TCTGTTCTTCCTATGGTGAC 58 NA Mus musculus 50 Nope ENSMUSG00000032816 ENSMUST00000035499 1 1 2 80 9 64969662 64969680 AGAGTGTAGTGATGGAGTG 57 64969724 64970472 AGATAGGCTTTCCATCCTG 58 NA Mus musculus 50 Tbc1d4 ENSMUSG00000033083 ENSMUST00000110796,ENSMUST00000110795 3 2 4 100 14 101858102 101862099 ACTGGAAGAAGCAAGAAGAG 59 101858021 101858042 TGTCCCATGCTATTAAGATCTC 59 NA Mus musculus 50 Hisppd2a ENSMUSG00000033526 ENSMUST00000110627,ENSMUST00000110628,ENSMUST00000052029,ENSMUST00000110629,ENSMUST00000110624,ENSMUST00000110626,ENSMUST00000110625,ENSMUST00000038906,ENSMUST00000110622 3 9 10 114 2 121163263 121163283 GTCAAGTATGATGTGCAACAC 59 121162931 121163188 TACTGATCCCATACTCCTGG 59 NA Mus musculus 50 Hisppd2a ENSMUSG00000033526 ENSMUST00000110628,ENSMUST00000052029,ENSMUST00000110624,ENSMUST00000089945,ENSMUST00000110626 1 5 10 80 2 121153432 121153450 CCGAATCTTCAGGACTACG 59 121152640 121153388 AAACAAGAGCTCATCTCGG 59 NA Mus musculus 50 Rbm9 ENSMUSG00000033565 ENSMUST00000063150,ENSMUST00000048145,ENSMUST00000089470 1 3 5 82 15 76936056 76936074 ATAGTGCTGATGCAGACAG 59 76933355 76936011 TGTTGCATTATTCACCTCGA 59 NA Mus musculus 50 6330503K22Rik ENSMUSG00000033904 ENSMUST00000106557,ENSMUST00000038650 2 2 2 90 7 125868899 125868917 GACAAAGAACCGATTCTGC 59 125868971 125869532 GCAGAAGTTATGAAGCCAG 58 NA Mus musculus 50 Eda2r ENSMUSG00000034457 ENSMUST00000037353,ENSMUST00000113832 2 2 2 87 X 94557159 94557177 CAAGAGAATGAGTACCGGG 59 94539404 94557108 AACCACAATCCTTCGAGAG 59 NA Mus musculus 50 Diap2 ENSMUSG00000034480 ENSMUST00000113320,ENSMUST00000037854,ENSMUST00000096329,ENSMUST00000031135 2 4 4 96 X 126824518 126862512 AAACAAAGAGGGTGATGAG 57 126862572 126862590 TCTTGGAATTCGCTTTCTG 58 NA Mus musculus 50 Ankrd12 ENSMUSG00000034647 ENSMUST00000038116 2 1 2 81 17 66399177 66399195 CCATCCATGAAACGAAAGC 59 66391930 66399132 CTGGGTCTGAATCTGTGTC 59 NA Mus musculus 50 Dgkh ENSMUSG00000034731 ENSMUST00000110850,ENSMUST00000074729 3 2 2 80 14 79018480 79019587 ACTCTGATGGTTTCTGTCG 59 79018418 79018439 TATCTCCACTCTTAGAGTTGAC 58 NA Mus musculus 50 Rcbtb1 ENSMUSG00000035469 ENSMUST00000043227,ENSMUST00000111255,ENSMUST00000022551,ENSMUST00000111258,ENSMUST00000095778 3 5 5 92 14 59828921 59829279 ACAATGATGAGGTCTTCGT 58 59829335 59829353 CTTCTAGTTTCTTGGGCAC 58 NA Mus musculus 50 Alg8 ENSMUSG00000035704 ENSMUST00000116289 1 1 2 97 7 104528376 104528394 TTTATTCTGTCCGTGCTCC 59 104528777 104528796 AACAGCAGTAACCAGACAG 59 NA Mus musculus 50 6330500D04Rik ENSMUSG00000036006 ENSMUST00000058009 1 1 5 116 13 24798136 24802007 GAAGAGTGGGTCAGTTCAC 59 24802087 24802105 TCATTTCCTGTGGTGAGTG 59 NA Mus musculus 50 Il5 ENSMUSG00000036117 ENSMUST00000048605 3 1 1 71 11 53537315 53537334 AAGAAATACATTGACCGCCA 59 53537447 53537465 GTAATCCAGGAACTGCCTC 59 NA DesignNoJunction Mus musculus 50 Cyld ENSMUSG00000036712 ENSMUST00000109626 3 1 4 81 8 91233893 91243204 CAGCTTTATCAGATAGCGTG 58 91243248 91243266 GAACCTTTGTCACCTACAC 57 NA Mus musculus 50 AY078069 ENSMUSG00000036931 ENSMUST00000108176,ENSMUST00000108175,ENSMUST00000046177 1 3 3 98 7 31211201 31211219 CAAGGATGCAGAATTCCCA 59 31211281 31212102 TGTTGCTCTTGATCTCCTG 59 NA Mus musculus 50 Slc39a12 ENSMUSG00000036949 ENSMUST00000114731 3 1 2 108 2 14355973 14365647 AAATACCAAGAAAGGCCCA 59 14371404 14371425 GATCATAATGGCCAATAAGCTG 59 NA Mus musculus 50 Bbs7 ENSMUSG00000037325 ENSMUST00000108156,ENSMUST00000040148,ENSMUST00000108155 3 3 3 80 3 36491331 36491352 CCAATAGATCTACTTGATGTGG 58 36489625 36491291 AAAGTTGTCGTTTGACTCTG 58 NA Mus musculus 50 Tulp1 ENSMUSG00000037446 ENSMUST00000041819 1 1 2 83 17 28490683 28490701 CTACACCCTCAACTTCCAG 59 28488938 28490637 ATATAGTCAGGGTCATCAGC 58 NA Mus musculus 50 Ubr5 ENSMUSG00000037487 ENSMUST00000110336 3 1 2 150 15 37970631 37970649 ATGTCTCTTCTTGACGCTG 59 37967774 37970518 GAAGGAGAACTCGTGATGAG 59 NA Mus musculus 50 Shank2 ENSMUSG00000037541 ENSMUST00000105900,ENSMUST00000084391,ENSMUST00000097929 2 3 3 141 7 151584158 151591244 AGAAGAAGGATAAACCGGA 57 151591349 151593027 GAATTCACATCAGAGGCAG 58 NA Mus musculus 50 Dzip1l ENSMUSG00000037784 ENSMUST00000078367,ENSMUST00000112885,ENSMUST00000112886,ENSMUST00000112884 1 4 4 80 9 99566208 99566228 GTCAATATGTTCTTAAGGCCC 58 99566269 99568072 CTCATCTTCTGAAAGCTGAG 57 NA Mus musculus 50 4921517L17Rik ENSMUSG00000038085 ENSMUST00000073942 1 1 4 80 2 156179036 156182271 CATGACAATGGGTTTCTCTG 58 156182313 156182332 TCTCCTCAGATTGATTGACC 58 NA Mus musculus 50 Fbxo8 ENSMUSG00000038206 ENSMUST00000040218 2 1 2 80 8 59068985 59069003 ACCAAGTTCTCACATAGGT 57 59069046 59070246 TACATAGACAGCATCAGGAC 58 NA Mus musculus 50 Plcl1 ENSMUSG00000038349 ENSMUST00000097735,ENSMUST00000042986 2 2 2 60 1 55752788 55752806 AACCTTCCAAGAAAGACCT 58 55752830 55752848 CTGATCTCTTTGATGGCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Lmx1b ENSMUSG00000038765 ENSMUST00000041730,ENSMUST00000113150 2 2 2 80 2 33424614 33424633 AAGGGTGACTATGAGAAGGA 59 33422833 33424572 TTCATCCTCACTCTTCACAG 59 NA Mus musculus 50 Sema6c ENSMUSG00000038777 ENSMUST00000090821,ENSMUST00000090823,ENSMUST00000079897 2 3 5 81 3 94972563 94972582 TTTACAGAAGTCTTGGACCT 58 94972626 94972746 TAGACAAAGTGTGGCTCTC 58 NA Mus musculus 50 Garnl4 ENSMUSG00000038807 ENSMUST00000102521,ENSMUST00000047488,ENSMUST00000108454 1 3 4 80 11 74249252 74249270 GGGAATTTGATCCTGTCCA 59 74239480 74249208 CTTCAGTTTGGACCTGAGG 59 NA Mus musculus 50 Picalm ENSMUSG00000039361 ENSMUST00000049537,ENSMUST00000107224 3 2 3 90 7 97330797 97330815 AGTAGTGGTGATGTTCACC 58 97330866 97337668 GACTGAATCCAACAAACATCTC 59 NA Mus musculus 50 Foxp3 ENSMUSG00000039521 ENSMUST00000115740,ENSMUST00000115739,ENSMUST00000115738,ENSMUST00000045566 2 4 4 129 X 7168645 7169295 CTTCCCAGAGTTCTTCCAC 59 7169800 7169820 GATTTCATTGAGTGTCCTCTG 58 NA Mus musculus 50 Nxph4 ENSMUSG00000040258 ENSMUST00000095266 1 1 2 62 10 126963256 126963274 AGCCCTTCAAAGTCATCTG 59 126963212 126963230 TCTGCACCAGTTTGTAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nlrp9c ENSMUSG00000040614 ENSMUST00000041845 3 1 2 83 7 27156474 27160279 CTCAAGGAGTTATGGTTAGAC 57 27156411 27156430 TGTGTTGCAAGTGATAAGAG 58 NA Mus musculus 50 Agbl2 ENSMUSG00000040812 ENSMUST00000111482 2 1 7 85 2 90629150 90629168 GGTACATGTTGAATGGCTC 58 90629216 90631627 CAGAAGTGAGTACAGAAGCA 59 NA Mus musculus 50 BC006965 ENSMUSG00000041674 ENSMUST00000028543 2 1 2 203 11 112572406 112572425 CTTCTTTGTCAAGTCTTGGG 58 112539143 112539161 AGATGTCTAAGTTGGTCCC 58 NA DesignNoJunction, InUTR Mus musculus 50 Acacb ENSMUSG00000042010 ENSMUST00000102582,ENSMUST00000031583 1 2 2 80 5 114638408 114638427 GATGTTCCGTAATGAACGTG 59 114638470 114640094 TTGATGTACTCTGCGTTGG 59 NA Mus musculus 50 Myo3b ENSMUSG00000042064 ENSMUST00000100044 3 1 5 96 2 70168911 70168932 GAAATACTGTCCAGATTCAGGA 59 70168989 70263640 TTCTTCGGAACCATCTGTG 59 NA Mus musculus 50 Hnrpf ENSMUSG00000042079 ENSMUST00000035493 1 1 1 120 6 117869147 117869165 CTACAGAAGGCATCTGTGG 59 117873797 117873815 TTGACCACATAGCCTTCAC 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Ppig ENSMUSG00000042133 ENSMUST00000090858,ENSMUST00000116494,ENSMUST00000040915 1 3 3 81 2 69571276 69572354 GAGGATTCTTTGAAGATGAGAG 58 69572396 69572414 GTATCCTTCCCTCTGTTGG 59 NA Mus musculus 50 2010015L04Rik ENSMUSG00000042233 ENSMUST00000105623,ENSMUST00000094408 2 2 4 93 4 154816164 154816182 AGTACCCATTACCTTCACC 58 154816237 154816955 TTAGTAAATCGGTGGACTCTG 59 NA Mus musculus 50 Frmpd3 ENSMUSG00000042425 ENSMUST00000050767,ENSMUST00000044702 2 2 2 81 X 136923128 136925871 CACTGTTAAGGATGTGATGG 58 136925915 136925933 ATACTCAAGCACAAGAGCA 58 NA Mus musculus 50 Prdm10 ENSMUSG00000042496 ENSMUST00000098915,ENSMUST00000074510 1 2 2 95 9 31123834 31123852 TGTATACAGCAGATGGTGC 59 31123911 31126106 TAAACAGAGTCTGTGCAGC 59 NA Mus musculus 50 Hecw2 ENSMUSG00000042807 ENSMUST00000097741 3 1 2 84 1 54097095 54097114 AACCTCATTATCTTCTGGGA 57 54007751 54097051 CTGGAGAATTCTCATCTATGTG 58 NA Mus musculus 50 Nup62 ENSMUSG00000043858 ENSMUST00000107891,ENSMUST00000057195 1 2 2 60 7 52084357 52084375 TCTTTGGCTCTTCTACCAC 58 52084399 52084417 CTGGTGAATGAGAACCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Klk14 ENSMUSG00000044737 ENSMUST00000056329 1 1 1 75 7 50947467 50947485 GATCAATGGGTCATCACTG 57 50949344 50949362 TTCTTATGTTGTGCTTGCC 58 NA DesignNoJunction Mus musculus 50 Zfp444 ENSMUSG00000044876 ENSMUST00000108567,ENSMUST00000108566 3 2 3 124 7 6125599 6125618 TTAGTCTTTGAAAGGAGCAG 57 6135465 6135483 TAGGTTTGAGTTACCAGCA 58 NA DesignNoJunction, InUTR Mus musculus 50 St7l ENSMUSG00000045576 ENSMUST00000106769,ENSMUST00000059271 2 2 3 80 3 104677848 104685716 CCTTCAGACACAGTTATGC 58 104685759 104685778 CTCTAAAGCTTGATAGGCTG 57 NA Mus musculus 50 Spred2 ENSMUSG00000045671 ENSMUST00000093298 3 1 3 117 11 19898293 19905795 ACAAACTGGTGGTATTGGA 58 19905875 19905894 GGACTTTGGAAAGTAAGTCC 58 NA Mus musculus 50 Zfp295 ENSMUSG00000046962 ENSMUST00000052089 1 1 3 124 16 98172028 98172646 GAGAGGAGTTTGAGCAAGG 59 98171922 98171940 TTTGTACTCACACCTGTCC 59 NA Mus musculus 50 Ccdc108 ENSMUSG00000047021 ENSMUST00000057511 2 1 2 88 1 74979703 74979723 GTGACTGTACAATGAACACTG 59 74975066 74979653 GTATTCCTTCTGGGTGGTG 59 NA Mus musculus 50 Tmem164 ENSMUSG00000047045 ENSMUST00000087333,ENSMUST00000112892,ENSMUST00000054263,ENSMUST00000112896 2 4 9 81 X 139117484 139186593 ATGATGCATATCTTCCTCCT 57 139205514 139205532 CATTCAACATGTGCATCTG 57 NA Mus musculus 50 Inhbe ENSMUSG00000047492 ENSMUST00000059718 1 1 1 60 10 126787370 126787389 TCTACCTTGACCATAATGGC 59 126787329 126787347 GCCTCTACTACCATGTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC055004 ENSMUSG00000047592 ENSMUST00000110930,ENSMUST00000110929,ENSMUST00000059879 2 3 3 60 5 138680708 138680726 GGAAGTAACCTAGAAGCCA 58 138680750 138680768 CGTGAACTTTAGCTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Nags ENSMUSG00000048217 ENSMUST00000055409 2 1 1 101 11 102009581 102010242 AATCCCTGGTACTTCAAGC 59 102010306 102010325 GACTAGTTCGTAGGAGTCTC 58 NA Mus musculus 50 Thnsl1 ENSMUSG00000048550 ENSMUST00000054591,ENSMUST00000114584 2 2 4 145 2 21131592 21131611 CTTCAGTGAGTTAAGCACAG 58 21133067 21133085 GACATCTGGTCAAGGTCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 E130114P18Rik ENSMUSG00000048747 ENSMUST00000107068 1 1 3 80 4 97235962 97241503 ACTTTGCATTTGGTTACCAG 58 97235901 97235919 TATCACAACTGGGTAGGAC 57 NA Mus musculus 50 2010005J08Rik ENSMUSG00000049680 ENSMUST00000053427,ENSMUST00000093362 1 2 2 82 11 5626353 5626371 AAACATCTGTGGCAATTGC 59 5622833 5623124 GTTTGTACCATCTCCATAATGG 58 NA InUTR Mus musculus 50 Arhgap23 ENSMUSG00000049807 ENSMUST00000107602,ENSMUST00000107601 3 2 3 80 11 97336712 97337366 CTCAGAGAAGAACAAGATGGA 59 97337407 97337426 ATGTTGTCTTCAGATGTCCT 58 NA Nonspecific Mus musculus 50 BC049635 ENSMUSG00000050141 ENSMUST00000055944,ENSMUST00000107978 1 2 2 80 4 42886898 42886917 GACCTATCAAGAGCTGTACC 59 42885960 42886374 TCCTCTTCTTAACTCTTAGCG 58 NA Mus musculus 50 Gprc5c ENSMUSG00000051043 ENSMUST00000053361,ENSMUST00000077652,ENSMUST00000021071 1 3 3 68 11 114725815 114725833 ATGTTTGTGGAGAACAAGG 57 114727943 114727961 GTAAGGTGACACTGGTCTC 59 NA DesignNoJunction Mus musculus 50 Mafg ENSMUSG00000051510 ENSMUST00000058162,ENSMUST00000106182,ENSMUST00000106181,ENSMUST00000106180 1 4 4 135 11 120491137 120491156 CAATAAAGGAAACAAGGCCT 58 120490940 120490958 GATCTCTTCCTTGGAGAGG 58 NA DesignNoJunction Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000011934,ENSMUST00000111865 1 2 14 113 2 76656871 76744326 ACACTAACTGTGACAGTGC 59 76655904 76656795 GGGTTTCTTTCTTAGAACGC 59 NA Mus musculus 50 Adarb2 ENSMUSG00000052551 ENSMUST00000110670,ENSMUST00000110669,ENSMUST00000064473 2 3 3 90 13 8700902 8700921 CTCTTCCATCTCTACGTGAG 58 8700974 8712860 GTTTGCTGCTGTTCAAGTC 59 NA Mus musculus 50 Prkg1 ENSMUSG00000052920 ENSMUST00000065067 1 1 2 176 19 31660204 31839047 GGTCGAAGGATCTCATAAAGG 59 31376881 31660066 CCTTCCCATCTTCCATGAC 59 NA Mus musculus 50 Gpr112 ENSMUSG00000053852 ENSMUST00000066533 3 1 3 90 X 54172201 54183184 CAAAGAGTCTACAGAGCCA 58 54183238 54183256 AGTAGGGTCAGTTAATGGC 58 NA Mus musculus 50 Jmjd2d ENSMUSG00000053914 ENSMUST00000115647 3 1 3 85 9 14269304 14289981 GGTTTGCAATGATTGTGTC 57 14269237 14269256 TTTCCTCTTGTAGGCTACTG 58 NA InUTR Mus musculus 50 Capg ENSMUSG00000056737 ENSMUST00000071044,ENSMUST00000114073,ENSMUST00000114072,ENSMUST00000114071 1 4 4 82 6 72508244 72508744 TGTATAAGGTCTCTGATGCC 58 72508789 72508807 AATTAGCAGTTCAGAGGCA 58 NA Mus musculus 50 Ryr3 ENSMUSG00000057378 ENSMUST00000091818 3 1 3 93 2 112590947 112590966 AAAGAGAAAGAAATGGTGGC 58 112573166 112573582 CCATTGTAGTTGAATCGTTACC 59 NA Mus musculus 50 Cacnb2 ENSMUSG00000057914 ENSMUST00000114723,ENSMUST00000065126,ENSMUST00000114719 3 3 6 80 2 14885539 14885557 AGGAGGGAATTCATCATCC 58 14885600 14889578 ATGTCTATAGCAGATGACGG 58 NA Mus musculus 50 Phf21a ENSMUSG00000058318 ENSMUST00000111297,ENSMUST00000068702,ENSMUST00000111294,ENSMUST00000111292 2 4 9 81 2 92189559 92189578 AGTCACTTACCTTAACAGCA 58 92191782 92197032 ATGGATATCACCCTTTGGC 59 NA Mus musculus 50 Pde1a ENSMUSG00000059173 ENSMUST00000102654,ENSMUST00000102655,ENSMUST00000102653,ENSMUST00000090756,ENSMUST00000102651,ENSMUST00000102652 2 6 7 81 2 79728093 79737235 ATACAGGTATCATGCACTGG 59 79728031 79728052 GTGTGCTCATAATCATGAATGG 59 NA Mus musculus 50 Taar2 ENSMUSG00000059763 ENSMUST00000079134 3 1 1 60 10 23661172 23661190 TCACCATCCTGTTAGATCC 58 23661214 23661232 AAGGCATCAAACAGAACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Arrb2 ENSMUSG00000060216 ENSMUST00000079056,ENSMUST00000108568,ENSMUST00000102564,ENSMUST00000084954,ENSMUST00000102563 1 5 5 80 11 70253400 70253676 GATACCAACTATGCCACAG 57 70253720 70253738 GTCATCATCCTTCATTCCC 57 NA Mus musculus 50 Sp7 ENSMUSG00000060284 ENSMUST00000078508 1 1 1 68 15 102188797 102188815 GGGAGAAGAAGTTCACCTG 59 102188747 102188765 GATGTTTGCTCAAGTGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hist4h4 ENSMUSG00000060639 ENSMUST00000102977 2 1 2 253 13 22132864 22132883 TAAGCTGCTCAGTTTCTTCC 59 22132630 22132649 GAAGGCTCTATTGGGATTCC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rrp1 ENSMUSG00000061032 ENSMUST00000092345 2 1 3 80 10 77867939 77867958 GACATCATGAATGAACTGGA 57 77867725 77867897 CTTGTTACTGTCACCTTCAC 58 NA Mus musculus 50 Ddhd2 ENSMUSG00000061313 ENSMUST00000033975 2 1 2 87 8 26848746 26848765 CAGAGATCTTCAGGAAATGG 57 26845575 26848697 AGGGTCAAATGAATTCTTCC 57 NA Mus musculus 50 Tnnt3 ENSMUSG00000061723 ENSMUST00000073821,ENSMUST00000105958,ENSMUST00000078497,ENSMUST00000105950,ENSMUST00000105954,ENSMUST00000105953 3 6 20 183 7 149691423 149693660 GAAGTCCAAGAAGATGCTG 58 149697210 149697228 CAAAGTGGCTGTCAATGAG 59 NA Mus musculus 50 Scgb3a1 ENSMUSG00000064057 ENSMUST00000076006,ENSMUST00000043873 2 2 2 96 11 49478036 49478054 CTCATAGAGGGATCCAGGA 59 49478476 49478494 CTCAACCGAACATTGTCAG 58 NA DesignNoJunction Mus musculus 50 Scn1a ENSMUSG00000064329 ENSMUST00000112366,ENSMUST00000112371 3 2 4 83 2 66161491 66162635 ATGACAATGGAACAACCAC 58 66161426 66161446 GATCTTCTAGAAAGTCCATGG 57 NA Mus musculus 50 Tacc1 ENSMUSG00000065954 ENSMUST00000084030 2 1 2 100 8 26288458 26292304 GTTTAATAACGAGCGGCTG 59 26285708 26285726 TGAGATCTTCGAGATCACG 58 NA Mus musculus 50 Olfr5 ENSMUSG00000066844 ENSMUST00000086319 1 1 1 60 7 6433626 6433645 AGATGTGCTATGTGTCAGTC 59 6433585 6433603 TAGAGTCCATTCCATAGCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 BC023744 ENSMUSG00000066894 ENSMUST00000111967,ENSMUST00000086464,ENSMUST00000111965 3 3 3 135 5 117801674 117801693 GAACAGGAGACAAATGAGAC 58 117801791 117802768 CACTGTCATCCTGAAACTC 57 NA Mus musculus 50 D430041D05Rik ENSMUSG00000068373 ENSMUST00000089726 1 1 2 83 2 104095718 104098329 ACATGTCAGTGGAAACCTC 59 104095653 104095671 TCAGAAACAATGTGGTGGT 59 NA Mus musculus 50 Clec16a ENSMUSG00000068663 ENSMUST00000115827,ENSMUST00000038145 3 2 6 80 16 10596061 10596079 ACGCTGAGAAGACTAAAGG 59 10596121 10611110 TCACCATCTCAATCTCTTCAC 59 NA Nonspecific Mus musculus 50 OTTMUSG00000010537 ENSMUSG00000070619 ENSMUST00000094526,ENSMUST00000105750 1 2 2 70 4 143952859 143952877 CTACTTTCTCACTGGCCAC 59 143953189 143953207 CCATTGACAGGAACTCCAG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Dtnb ENSMUSG00000071454 ENSMUST00000101637 2 1 3 161 12 3751897 3754104 AGTTGCTAAAGGAGGAAGAG 59 3772698 3772716 CAACTCCACTCAGTGAGTC 59 NA Mus musculus 50 1700066B19Rik ENSMUSG00000073598 ENSMUST00000097617 3 1 1 65 18 35888434 35888452 TTTATTCCTCACTCTGGCC 58 35888481 35888499 CAGATACGTGACTTCATCG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gabrr3 ENSMUSG00000074991 ENSMUST00000099653 2 1 2 155 16 59433235 59434402 GGATGCCTATAATGAAGAGGA 58 59434519 59440314 CTATAGTACCACCCTGTGC 58 NA Mus musculus 50 Gm1587 ENSMUSG00000075512 ENSMUST00000100372 2 1 1 88 14 78196802 78196821 TAAGGATGGAAACAGCAGAG 59 78194801 78194819 GAAGAGCTTCATTGACCAC 58 NA DesignNoJunction Mus musculus 50 ENSMUSG00000075546 ENSMUSG00000075546 ENSMUST00000100438 2 1 1 65 5 147707714 147707733 GAAACTGTAGAGGACCACTG 59 147707668 147707686 ATATGTCTGTGAGGCAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Klhl17 ENSMUSG00000078484 ENSMUST00000105569,ENSMUST00000105568 2 2 2 98 4 155605261 155605279 TGAACGATATGACCCACTG 59 155605071 155605199 TACAGGTTCCCATCAAGTG 58 NA InUTR Mus musculus 50 Sirpb1 ENSMUSG00000078781 ENSMUST00000108356 2 1 2 81 3 15542194 15542212 GCAGAAGTCATTGAAACCC 59 15541810 15542149 TAGGACACTCAGACTTGGT 59 NA Mus musculus 50 Eif5a ENSMUSG00000078812 ENSMUST00000071026,ENSMUST00000070996,ENSMUST00000043419,ENSMUST00000108612,ENSMUST00000108611,ENSMUST00000108610,ENSMUST00000108613,ENSMUST00000108609,ENSMUST00000108608,ENSMUST00000108607 1 10 10 161 11 69731420 69731438 TCAAACGGAATGACTTCCA 59 69730994 69731107 GCACTGTGATCAGGATCTC 59 NA Mus musculus 50 ENSMUSG00000068790 ENSMUSG00000079376 ENSMUST00000112760,ENSMUST00000112759,ENSMUST00000112758 3 3 3 81 14 5547485 5547505 CAATGACATGGAGGAAATGTG 59 5546475 5547445 GTTGAATTCAGTGTTCATCCTG 59 NA Nonspecific Mus musculus 50 Phyhd1 ENSMUSG00000079484 ENSMUST00000091132,ENSMUST00000113645,ENSMUST00000113648 1 3 7 118 2 30130197 30130215 AAATTTCTTGGTCCCTCCT 58 30132576 30132683 GACTTCTAACCAAAGCCTG 58 NA Mus musculus 50 Mtcp1 ENSMUSG00000079529 ENSMUST00000114084,ENSMUST00000033543,ENSMUST00000114083 3 3 3 60 X 72650543 72654889 ACAAGCCAACAACTATTTGG 58 72650502 72650521 ACACTTACGAAGTTCTTGGA 58 NA DesignNoJunction Mus musculus 50 Krtap2-4 ENSMUSG00000058725 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-450a-2 ENSMUSG00000076399 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 TRBJ1-3 ENSMUSG00000076485 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Drp2 ENSMUSG00000000223 ENSMUST00000113228,ENSMUST00000113226,ENSMUST00000000228,ENSMUST00000113224 3 4 4 81 X 130969573 130969591 TGAGAGGCTTAAGCAACTC 59 130969636 130971573 AACTTGGACAGAAGTGGAG 59 NA Mus musculus 50 Pcnt ENSMUSG00000001151 ENSMUST00000001179 1 1 1 80 10 75896398 75896418 CAGAAGGAATTGTCAGAACAG 58 75895872 75896357 GTTCTTCAGGGAAACTTCAG 58 NA Mus musculus 50 Irf9 ENSMUSG00000002325 ENSMUST00000002396,ENSMUST00000053473 1 2 2 80 14 56226683 56227530 TTCTGTAGAGATTTGGCCC 58 56227574 56227592 CTCCTCCCAGAAATGTAGG 58 NA Mus musculus 50 Homer3 ENSMUSG00000003573 ENSMUST00000110124,ENSMUST00000003669,ENSMUST00000110123 2 3 4 105 8 72809873 72809891 AAACCTCTCAGAAGTTCGG 59 72809959 72813309 TGAAACTTCTCAGCAAACTG 58 NA Mus musculus 50 Homer3 ENSMUSG00000003573 ENSMUST00000087467 1 1 4 93 8 72809873 72809891 AAACCTCTCAGAAGTTCGG 59 72809948 72810199 TATATCTGGGTCAGCTGCT 59 NA DesignNoJunction Mus musculus 50 Farsa ENSMUSG00000003808 ENSMUST00000003906,ENSMUST00000109754,ENSMUST00000095222 3 3 3 124 8 87385215 87385235 ACAGTATAGAGGATGAAGTGC 59 87385321 87387966 TTTCAGGATCACTTCCGTC 59 NA Mus musculus 50 Emg1 ENSMUSG00000004268 ENSMUST00000004379 2 1 1 66 6 124655106 124655194 CCCTCAGAAGCTATTGAAGG 59 124655059 124655077 TTTCATACAGCCAACTGGG 59 NA DesignNoJunction Mus musculus 50 Tbccd1 ENSMUSG00000004462 ENSMUST00000004576 1 1 1 80 16 22822826 22822845 CTCTAGTAGGAGCACATGTC 58 22822642 22822783 TTGTCATGGATCGTAAGGG 59 NA Mus musculus 50 Mcoln1 ENSMUSG00000004567 ENSMUST00000004683,ENSMUST00000111076 3 2 2 80 8 3508712 3508732 CTGAAGACAATTAACCTGCAG 59 3508771 3509147 GTCAAATGTGATCAGGATACTG 58 NA Mus musculus 50 Cd247 ENSMUSG00000005763 ENSMUST00000086002,ENSMUST00000111431,ENSMUST00000005907,ENSMUST00000027849 2 4 4 104 1 167787568 167787587 GAGGAATATGACGTCTTGGA 58 167788600 167789358 CTGCAGTGCATTGTATACG 58 NA Mus musculus 50 Tssk4 ENSMUSG00000007591 ENSMUST00000007735 3 1 1 65 14 56270686 56271117 CAAGAACCTGATCCTCCAG 59 56271146 56271164 CTGAGGACATCTAGGATGG 58 NA DesignNoJunction Mus musculus 50 Taf7l ENSMUSG00000009596 ENSMUST00000009740,ENSMUST00000113223 1 2 2 84 X 131000504 131000522 GAGTTAGAGAAGGAGCTGC 59 131000265 131000457 TTGCCATGGTTATTGAACTG 58 NA Mus musculus 50 Atp6v0d1 ENSMUSG00000013160 ENSMUST00000013304 3 1 1 82 8 108049590 108053081 TTTACAAGGCCTACTTGGAG 59 108049527 108049545 TAGGATAGGACACATGGCA 59 NA Mus musculus 50 4931406B18Rik ENSMUSG00000013353 ENSMUST00000013497 3 1 1 82 7 50754817 50756396 AACTCAGAAAGACCTGACC 58 50754753 50754771 TACAGCTCAAAGTCACAGG 59 NA Mus musculus 50 BC053440 ENSMUSG00000014907 ENSMUST00000015051 1 1 1 194 8 69407492 69409671 AAGCTCAAACAGGACAGAG 59 69412970 69412988 ATTCTCATGCACTTCACCA 59 NA Mus musculus 50 Sash1 ENSMUSG00000015305 ENSMUST00000015449 1 1 1 81 10 8459170 8459191 GAATTAAATATCAGGGACCCAG 58 8453499 8459131 CACTGTTACTGTCATATTCCTG 58 NA Mus musculus 50 Ppp2r5c ENSMUSG00000017843 ENSMUST00000065483,ENSMUST00000084985,ENSMUST00000109832,ENSMUST00000017987 2 4 4 80 12 111760831 111760850 GATGGTGGAGTATATCACCC 59 111760892 111782295 TTAACTGCAAACATGTGGAC 58 NA Mus musculus 50 Pcgf2 ENSMUSG00000018537 ENSMUST00000103148,ENSMUST00000018681 2 2 3 80 11 97554091 97554111 CTTGGAGACCAACAAATACTG 58 97553865 97554050 TTGTCTGATCTGATGCTCAG 59 NA Mus musculus 50 Sparc ENSMUSG00000018593 ENSMUST00000108858,ENSMUST00000018737 3 2 2 89 11 55209442 55212058 TATTGATGGGTACCTGTCC 58 55209371 55209389 GTCTCAAAGAAACGTGTGG 58 NA Mus musculus 50 Lhx1 ENSMUSG00000018698 ENSMUST00000018842,ENSMUST00000108082 2 2 3 148 11 84333901 84333920 GAAGGATGAAACAGCTAAGC 58 84333417 84333790 CTCACTCTGGTAATCTCCG 58 NA InUTR Mus musculus 50 P4ha2 ENSMUSG00000018906 ENSMUST00000019050 3 1 2 98 11 53939904 53942561 TCTAAACTACATGAGCGATGTC 59 53942969 53942987 TACCAGAATACAGCTGTGC 59 NA Mus musculus 50 2410017P07Rik ENSMUSG00000019813 ENSMUST00000105505,ENSMUST00000105504,ENSMUST00000019951 1 3 3 87 10 41439702 41441370 AAGACAGTGTCCGTAAACTG 59 41439634 41439653 TTAGATCCTTTAGGGTTGCC 59 NA Mus musculus 50 Ltv1 ENSMUSG00000019814 ENSMUST00000019950 2 1 1 80 10 12898976 12898994 CGTTCCAAAGATGAGACCA 59 12898788 12898933 TTCAACTCTTCGTTCCTTCC 59 NA Mus musculus 50 Gtf3c6 ENSMUSG00000019837 ENSMUST00000116248,ENSMUST00000019982 1 2 2 87 10 39974104 39974215 AGTATGAAGATACGCTTGGT 58 39971042 39971060 TTCAGCACCGTCTTATCAG 59 NA Mus musculus 50 Prep ENSMUSG00000019849 ENSMUST00000099858 1 1 1 80 10 44835045 44840453 GAGAAGGATGTCTTAGAATGG 57 44840495 44840513 AATGTTCTTCACGTCATGG 58 NA Mus musculus 50 Sar1a ENSMUSG00000020088 ENSMUST00000020285 1 1 1 97 10 61147845 61147863 CTTAGGATTGGACAATGCG 58 61147924 61148310 CTTCTGAAGTGGGATGGAG 59 NA Mus musculus 50 Rhbdf1 ENSMUSG00000020282 ENSMUST00000102828,ENSMUST00000109402 1 2 3 178 11 32114965 32114983 ACAATGTGTCCCTAACCAG 59 32114291 32114398 CTAATAGACCGACCCTTCAC 59 NA InUTR Mus musculus 50 2310033P09Rik ENSMUSG00000020441 ENSMUST00000020719 3 1 1 171 11 59022173 59022337 ACTTGGTTACAAGAACGTG 57 59022651 59022669 TTTGTCTTCTCGGGATAGC 59 NA DesignNoJunction Mus musculus 50 Pctp ENSMUSG00000020553 ENSMUST00000020864 1 1 1 80 11 89850060 89850079 AGAAGGAGAGTGATGAACAG 58 89848672 89850019 TGTAGACGTAATCTCTGTTGG 59 NA Mus musculus 50 Rffl ENSMUSG00000020696 ENSMUST00000074515,ENSMUST00000071152,ENSMUST00000108173,ENSMUST00000108172,ENSMUST00000108171,ENSMUST00000093975,ENSMUST00000021036,ENSMUST00000103218,ENSMUST00000108169 2 9 9 99 11 82623579 82623597 GTCAACTATAAGGGCTGCT 59 82622027 82623516 CATTACCAGACACCAGGTG 59 NA Mus musculus 50 Galr2 ENSMUSG00000020793 ENSMUST00000055872 3 1 1 61 11 116144691 116144711 CTAGTATCTTATGCCAACTCG 57 116144734 116144752 AAATGCTTGGAGACCAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Krt19 ENSMUSG00000020911 ENSMUST00000007317 1 1 1 80 11 100003786 100003804 GACAACTCCAAGATTGTCC 58 100003507 100003743 GTGTTCTGTCTCAAACTTGG 58 NA Mus musculus 50 Dhrs7 ENSMUSG00000021094 ENSMUST00000021512 2 1 1 108 12 73753430 73754103 CGAGGAAGTAACTAAGTCTATGAG 59 73753345 73753363 TTCCTTCAGATCATTGGCC 59 NA Mus musculus 50 Idi2 ENSMUSG00000021148 ENSMUST00000021573 3 1 1 93 13 8941256 8941818 CAGGATCAGATTTCCATAAAGG 58 8941184 8941202 AGCCAATCTCATGTTCTCC 59 NA Nonspecific Mus musculus 50 Rps6ka5 ENSMUSG00000021180 ENSMUST00000043599,ENSMUST00000110076 1 2 2 80 12 101892693 101916740 CTAGGAACTGGAGCTTATGG 59 101892632 101892652 CTTCATAGCATACAGCTTTCC 58 NA Mus musculus 50 Trip11 ENSMUSG00000021188 ENSMUST00000021605,ENSMUST00000110038 1 2 3 81 12 103140543 103143974 AAGATCAGAGAATGAAAGGC 57 103140481 103140500 CTGCTTAATTTGAAGTTCGG 57 NA Mus musculus 50 Xrcc4 ENSMUSG00000021615 ENSMUST00000022115 3 1 1 118 13 90140609 90140627 CATTTGTTACTGCCTGGAC 58 90132198 90140527 CACATTTCTCAAATCGGCC 59 NA Mus musculus 50 Polk ENSMUSG00000021668 ENSMUST00000022172,ENSMUST00000091387,ENSMUST00000091386,ENSMUST00000091385,ENSMUST00000109446 1 5 6 80 13 97271619 97274477 GTGAGTAAGGAGGTTAAGGAG 59 97271559 97271577 ATTCAAGTAGGCTTCGTCC 59 NA Mus musculus 50 Glud1 ENSMUSG00000021794 ENSMUST00000022322 2 1 1 80 14 35147467 35148495 TTGTTGTTCAGGGATTTGG 58 35148539 35148557 CAACACCAACACATTTAGC 57 NA Mus musculus 50 Atp12a ENSMUSG00000022229 ENSMUST00000007340 1 1 1 80 14 56998952 56999609 GGGATCAAGGTTATCATGG 57 56999652 56999671 GGCTGATATGATTCCTACAC 57 NA Mus musculus 50 Hrsp12 ENSMUSG00000022323 ENSMUST00000022946 2 1 1 103 15 34416379 34416397 CTTTGGCACTGTCAATGAG 59 34414275 34415358 TTTCAACTCGACTTCCTCTG 59 NA Mus musculus 50 Smcr7l ENSMUSG00000022412 ENSMUST00000023048 3 1 1 81 15 80078470 80078680 CCTTTGACACAGATACATTCTG 59 80078721 80078740 AGTCGTGACTTCTTCAAGTC 59 NA Mus musculus 50 Polr3h ENSMUSG00000022476 ENSMUST00000023113 1 1 1 81 15 81752887 81752907 GTCTGTTTGATATCACCAAGC 59 81749179 81752844 TAGCGGAAATGGACTTTGG 59 NA Mus musculus 50 Thap7 ENSMUSG00000022760 ENSMUST00000100125,ENSMUST00000023443 3 2 2 165 16 17530458 17530476 TTCCCAAGAAAGACAACCC 59 17529157 17530330 CTGTGATACCCACTGATTCC 59 NA Mus musculus 50 Umps ENSMUSG00000022814 ENSMUST00000023510 2 1 1 90 16 33960430 33961664 CAGTATGAAAGTGGCACCT 59 33960358 33960377 GTAAGCCTTTCACAACTCCT 59 NA Mus musculus 50 Parp9 ENSMUSG00000022906 ENSMUST00000114880,ENSMUST00000114877 1 2 3 80 16 35941211 35943464 CCTATTACATGGATACATGGG 57 35943503 35943524 CTTTCTTAAATGAGAGGGAGAG 57 NA Mus musculus 50 Psmg1 ENSMUSG00000022913 ENSMUST00000023630 1 1 1 82 16 96201709 96203717 TTGGTGAAGAACATTCCTG 57 96201645 96201664 CATGTGTAAATGTTGCTCTG 57 NA Mus musculus 50 Ela1 ENSMUSG00000023031 ENSMUST00000023775 1 1 1 80 15 100511712 100513328 AAGAACCAGAACCAATGGG 59 100511650 100511668 CTGGAGCAGATGCTATAGG 58 NA Mus musculus 50 Nus1 ENSMUSG00000023068 ENSMUST00000023830 1 1 1 98 10 52150013 52153161 AGCTTACTTAGTTCACATGGG 59 52153221 52153239 CAATCTGATTTGCCAGGGA 59 NA Mus musculus 50 Akap8 ENSMUSG00000024045 ENSMUST00000002699 2 1 1 80 17 32447944 32447963 TTTCACAAAGAGACTTTGCG 59 32447602 32447904 GTTTATGATGTACTCCTGGAGG 59 NA Mus musculus 50 Cul2 ENSMUSG00000024231 ENSMUST00000025073,ENSMUST00000080089,ENSMUST00000115872 3 3 3 80 18 3399914 3399935 CTCCTAACTACAATCAAAGCTG 58 3399974 3405692 ATAGATATCTGAGAAGCGGTC 58 NA Mus musculus 50 Pfdn1 ENSMUSG00000024346 ENSMUST00000025204 1 1 1 80 18 36592010 36592030 CCAAGGAAGTAATTCACAACC 59 36564105 36591968 ATTTCTTCTGCTCCAGCTC 59 NA Mus musculus 50 Dpf2 ENSMUSG00000024826 ENSMUST00000025746 1 1 1 80 19 5901268 5901287 TTTCTGTGATGACTGTGACC 59 5898622 5901225 CTCCAACTTCCTTCAGGAG 59 NA Mus musculus 50 Acsl5 ENSMUSG00000024981 ENSMUST00000043150 1 1 1 80 19 55355099 55355834 ATGATGCGGAGAATATAGGC 59 55355958 55355976 TGAAACAGATGACGCTCAG 59 NA Mus musculus 50 ENSMUSG00000025039 ENSMUSG00000025039 ENSMUST00000026015 1 1 1 91 19 46964411 46964429 CACATGTCCATGTCATGAG 58 46964606 46964740 TACAAGTAACTGGACAGCA 58 NA Mus musculus 50 Bnc1 ENSMUSG00000025105 ENSMUST00000026096 1 1 1 99 7 89123374 89123392 TACTCTGAACTGCAGTTGC 59 89122320 89123311 CTTACTCAGAGCATGAGCC 59 NA Mus musculus 50 Ints4 ENSMUSG00000025133 ENSMUST00000026126 3 1 1 80 7 104667652 104667670 GGGTGTATAGTGTTCAGCA 58 104667713 104675155 CAAGTCTTTGCAGATCTCTG 58 NA Mus musculus 50 Arih1 ENSMUSG00000025234 ENSMUST00000026264 1 1 1 80 9 59302258 59302276 AATCCAGCAACTATCACGA 58 59284710 59302215 TCCATCAAAGTACCTTTCCA 58 NA Mus musculus 50 Nptx1 ENSMUSG00000025582 ENSMUST00000026670 1 1 1 116 11 119406140 119407974 TGGAGAAAGGTCAGAAAGAC 59 119406043 119406061 TGAAGGCATACATCTCTGG 58 NA Mus musculus 50 Plk4 ENSMUSG00000025758 ENSMUST00000026858 1 1 1 82 3 40609775 40609793 GTAGAACGTTGTCACTCAG 57 40609838 40610423 CAATGATGATTGGAACTGTG 57 NA Mus musculus 50 Plcd4 ENSMUSG00000026173 ENSMUST00000067916,ENSMUST00000113749,ENSMUST00000113750,ENSMUST00000113747,ENSMUST00000113745,ENSMUST00000113748,ENSMUST00000027362 3 7 7 88 1 74602585 74602604 TTTATCATGGGCATACCCTG 59 74602654 74604305 GTAGTCTGATGACTGGAAGG 59 NA Mus musculus 50 Des ENSMUSG00000026208 ENSMUST00000027409 2 1 1 81 1 75360196 75360214 CTCAATGTGAAGATGGCCT 59 75360259 75361913 GAAGGTTGATCCTGCTCTC 59 NA Mus musculus 50 Mterfd2 ENSMUSG00000026273 ENSMUST00000027492 3 1 1 143 1 95199402 95199420 ATTGACCGAGTTGTGAAGG 59 95198355 95199298 CATCCTGAAATATGCATACTGG 58 NA Mus musculus 50 Cacna1s ENSMUSG00000026407 ENSMUST00000112068,ENSMUST00000074283,ENSMUST00000112064 2 3 3 80 1 138009577 138009868 CTCCAATAGGAGATGATGAGG 59 138009910 138009928 TCATGAACTTCCGGAAGTG 59 NA Mus musculus 50 Lrp2 ENSMUSG00000027070 ENSMUST00000080953,ENSMUST00000100051,ENSMUST00000092551 1 3 3 80 2 69371557 69371577 ATATGGAGGAGAATGCTTCTG 59 69365689 69371516 CAGTCATCGAAATCAATGCA 58 NA Mus musculus 50 Arhgap1 ENSMUSG00000027247 ENSMUST00000111329,ENSMUST00000111331,ENSMUST00000070873,ENSMUST00000090614,ENSMUST00000111330 1 5 5 122 2 91510715 91510875 TTCCTGGTGCAGATATCTG 58 91510961 91510979 ATTGATAGCCTTGAGGGTG 59 NA Mus musculus 50 Tpd52 ENSMUSG00000027506 ENSMUST00000091355,ENSMUST00000091354 3 2 4 136 3 8944701 8947488 ACCAATGCATACAAGAAGAC 58 8936454 8936474 CTAATCGAATGCTGAATGGAG 58 NA Mus musculus 50 Zfp64 ENSMUSG00000027551 ENSMUST00000109162,ENSMUST00000087971,ENSMUST00000045842,ENSMUST00000109161 3 4 5 60 2 168766392 168777058 TCAGACTATCACAGTTTCAGC 59 168766352 168766370 CAGGTAAGTTTGGTAGCCA 59 NA DesignRelaxed Mus musculus 50 Gstm4 ENSMUSG00000027890 ENSMUST00000116285,ENSMUST00000029489,ENSMUST00000106670 2 3 3 80 3 107845105 107845123 GCACCTTATATTCGAACCC 57 107844233 107845061 CTCTTCAGTACCTCAAAGC 57 NA Mus musculus 50 Tmem77 ENSMUSG00000027900 ENSMUST00000067630,ENSMUST00000029507 3 2 2 96 3 106358217 106364675 CTTATATCAGCGACACAGG 57 106368963 106368981 ACATACATGGTAGCAATGC 57 NA Mus musculus 50 Col11a1 ENSMUSG00000027966 ENSMUST00000029583,ENSMUST00000092155,ENSMUST00000029582,ENSMUST00000029586,ENSMUST00000029585 1 5 5 80 3 113769428 113769447 CGATAGTCGATACCAATGGA 58 113769490 113793065 ACTGCTGAATATCACCCTG 59 NA Mus musculus 50 Tmem68 ENSMUSG00000028232 ENSMUST00000029891,ENSMUST00000108388 2 2 2 81 4 3496564 3496583 TCTCATAACTTGTGGGATGG 59 3491396 3496522 CTTCATAACCATGCCAAACAG 59 NA Mus musculus 50 Glipr2 ENSMUSG00000028480 ENSMUST00000107855 2 1 2 105 4 43970639 43983383 AAATCAGGAAAGGATGTGG 57 43990337 43990355 ATACCATGGCTGTAAAGTG 57 NA DesignNoJunction Mus musculus 50 Pde4b ENSMUSG00000028525 ENSMUST00000106911,ENSMUST00000030251,ENSMUST00000106908,ENSMUST00000106904,ENSMUST00000097950,ENSMUST00000106901,ENSMUST00000097949 3 7 9 82 4 102268703 102270067 GATCATCTAGCCAAGGAGC 59 102270113 102270131 GGCCGATTATGTGAGTACC 59 NA Mus musculus 50 St3gal3 ENSMUSG00000028538 ENSMUST00000106414,ENSMUST00000106412,ENSMUST00000030263,ENSMUST00000106410,ENSMUST00000097912 1 5 5 83 4 117605732 117612623 ATCAAAGAGTCCTGGACAC 58 117605667 117605685 TAAGTCAGTGATGACACGT 58 NA Mus musculus 50 Lypla2 ENSMUSG00000028670 ENSMUST00000105852,ENSMUST00000067567 1 2 2 85 4 135526374 135526393 ATGTCAAGTACATCTGTCCC 59 135525776 135525879 CATCAGGTCAAACCAGGAG 59 NA Mus musculus 50 Pla2g2c ENSMUSG00000028750 ENSMUST00000105808,ENSMUST00000030530 1 2 2 92 4 138287532 138290187 CTTCTACTGGACAACCTCC 58 138290243 138290261 TAATAGGAGAAGAAGGCGC 58 NA Mus musculus 50 1700001C02Rik ENSMUSG00000029182 ENSMUST00000114743 3 1 2 83 5 30783021 30784415 TTTACAAGGTGGTACAGCA 58 30784461 30784480 TCTTGGTAATACTTCCGCTG 59 NA Mus musculus 50 Nos1 ENSMUSG00000029361 ENSMUST00000111939,ENSMUST00000086451,ENSMUST00000111935,ENSMUST00000102557 1 4 4 86 5 118397570 118399655 GGCCAAAGAAATATGTACAGG 59 118399703 118399721 AAATATGGCCTCCTTGCTC 59 NA Mus musculus 50 Aacs ENSMUSG00000029482 ENSMUST00000031445 2 1 1 80 5 125975363 125983560 TTTGGTGTAAATGGTGTCCT 59 125983603 125983621 ATTGTAGACAACAGCCTCC 59 NA Mus musculus 50 D5Ertd585e ENSMUSG00000029501 ENSMUST00000031474,ENSMUST00000086674 3 2 2 85 5 110667080 110667098 GATGACAACATGGACATGC 59 110667146 110670958 GTATCAAAGCCCACTTTGTC 59 NA Mus musculus 50 Ptcd1 ENSMUSG00000029624 ENSMUST00000085674 3 1 2 158 5 145916241 145925932 AAGACTCTTCAAGTGTGGC 59 145916101 145916119 GAGCAAGATGGTCTCTTCC 59 NA Mus musculus 50 Cpsf4 ENSMUSG00000029625 ENSMUST00000070487,ENSMUST00000110642 2 2 3 178 5 145937062 145938105 TAAATTCATGCACCCTCGA 58 145939777 145939795 TGTAGCAAGTGACTTGCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 2010007H12Rik ENSMUSG00000029725 ENSMUST00000031739 1 1 1 98 5 138221120 138221138 CAACCCAGATTCTCTGTGG 59 138221200 138221218 AAGGTATCTTCTGAAGGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gcs1 ENSMUSG00000030036 ENSMUST00000032114 2 1 1 87 6 83066745 83066763 AGTGAACTTGGTGACTTCC 59 83066814 83066984 AGAAGACATTGTAGCTGCC 59 NA Mus musculus 50 1190003M12Rik ENSMUSG00000030048 ENSMUST00000032127 3 1 1 93 6 87335561 87337055 ACTACAAGAACGACCTCCT 59 87335486 87335504 TCATCCAAACTTGGGAAGG 59 NA Mus musculus 50 AB041550 ENSMUSG00000030053 ENSMUST00000032132 2 1 1 111 6 87681346 87681364 CACATCGAGACACAGATCC 59 87681439 87681457 TTTCCTCCTCTAGATGTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ogg1 ENSMUSG00000030271 ENSMUST00000032406 2 1 1 144 6 113278598 113279233 AATTCCAAGGTGTGAGACTG 59 113279340 113279358 TCAAGCTGAATGAGTCGAG 59 NA Mus musculus 50 Ate1 ENSMUSG00000030850 ENSMUST00000094017,ENSMUST00000033139,ENSMUST00000035458 1 3 3 93 7 137654424 137657292 CCTCAGTATACAATAAGGTGTC 57 137654352 137654371 CTTTAGCCAGAAATTTCAGC 57 NA Mus musculus 50 Arhgap4 ENSMUSG00000031389 ENSMUST00000114405,ENSMUST00000114407,ENSMUST00000114406,ENSMUST00000114398,ENSMUST00000064376,ENSMUST00000114404 1 6 7 87 X 71145796 71145981 CAGAAGAGGTGAATAAGACAC 58 71145729 71145747 AAAGAGTCCAGTATGTCCC 58 NA Mus musculus 50 L1cam ENSMUSG00000031391 ENSMUST00000114430,ENSMUST00000102871,ENSMUST00000114433,ENSMUST00000066605,ENSMUST00000114417,ENSMUST00000066576,ENSMUST00000114424 2 7 7 60 X 71102122 71102249 CTTACCAGAAGGGAAAGTG 57 71102080 71102100 ATTGTAGCTGACATACTGAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Dusp4 ENSMUSG00000031530 ENSMUST00000033930 3 1 1 91 8 35880316 35880334 TACCAGTACAAGTGCATCC 58 35880388 35881461 TTTACTGCGTCGATGTACTC 59 NA Mus musculus 50 AI316807 ENSMUSG00000031534 ENSMUST00000033935 3 1 1 96 8 23581985 23582003 AGAAGGGATGTTGTCAGAG 58 23573834 23581927 CTCATACTTTCTTGAAACGGG 58 NA Mus musculus 50 Irx5 ENSMUSG00000031737 ENSMUST00000034184 2 1 1 67 8 94883706 94883724 GAGAACAAGATGACGTGGA 59 94883755 94883773 AGATCGATGTTCTCCTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pdgfd ENSMUSG00000032006 ENSMUST00000058692 2 1 2 77 9 6359857 6359875 AACTGTCAACTGGAAGTCC 59 6359915 6376911 GGCTCAAACTTCAATACCTC 58 NA DesignRelaxed Mus musculus 50 Pigb ENSMUSG00000032203 ENSMUST00000093819 2 1 1 61 9 72862852 72862870 GTTATCACTCCAGGAAGCA 58 72862809 72862827 CATTGAGGGATAAAGCCGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Chrna3 ENSMUSG00000032303 ENSMUST00000034851,ENSMUST00000114316 3 2 2 91 9 54872111 54872130 CAGTTTGAGGTGTCTATGTC 57 54870085 54871961 TCATTCCAGATTTGCTTCAG 58 NA Mus musculus 50 Pstpip1 ENSMUSG00000032322 ENSMUST00000059206 3 1 1 82 9 55974471 55975302 GATAAAGAGGTTCTCTGGGC 59 55975536 55975554 GAGTCAGAGTCTCTGTGGA 59 NA Mus musculus 50 Loxl1 ENSMUSG00000032334 ENSMUST00000064417 1 1 2 209 9 58160001 58160021 GTCATCTATCCCTTCCAGC 59 58159808 58159826 CTTCATTGTACAGGCTGTG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Rpl4 ENSMUSG00000032399 ENSMUST00000034966 1 1 1 83 9 64025541 64025559 AAGATGATGAACACCGACC 59 64025606 64025716 ATGAATCTTCTTGCGTGGT 59 NA Mus musculus 50 Gpr19 ENSMUSG00000032641 ENSMUST00000066107 1 1 4 128 6 134827334 134837649 AGAGGAGGTGATATTCATGTG 58 134820492 134827245 CACTTAGTTCTGAAAGCCTG 58 NA InUTR Mus musculus 50 Ddx17 ENSMUSG00000032657 ENSMUST00000041913 1 1 1 82 3 88992388 88992495 GATATAAGCAAGTGCGCAG 59 88992541 88992559 AGAGCTCAAATCACCACAG 59 NA Mus musculus 50 Inppl1 ENSMUSG00000032737 ENSMUST00000035836 2 1 1 80 7 108976798 108976931 CTGCAATTCCTATGGTTGC 59 108976736 108976756 GTAACTCCAACCTCAAATGTC 58 NA Mus musculus 50 Cyb5r4 ENSMUSG00000032872 ENSMUST00000050631 3 1 2 86 9 86933584 86935228 TTAAATGGCATGCTTCCCA 59 86935278 86935342 TGCAGAACTGCTATCACTG 59 NA Mus musculus 50 Ccdc85a ENSMUSG00000032878 ENSMUST00000042534,ENSMUST00000109502 2 2 4 111 11 28334150 28476401 CGGCATGAATGAATCAACC 59 28288925 28288943 ATCTCCAAGTTTCCTCCAC 58 NA Mus musculus 50 Spg11 ENSMUSG00000033396 ENSMUST00000036450 1 1 1 80 2 121933818 121933836 CTCAGCCAGAAGTGTACTC 59 121929773 121933775 CAGAGACAGACCATCATCTG 59 NA Mus musculus 50 Zbtb1 ENSMUSG00000033454 ENSMUST00000042779,ENSMUST00000070594 2 2 2 60 12 77487465 77487483 CCCATACAAGAGGATGCAG 59 77487506 77487525 CCTCAGTTATTGTGAGTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tubgcp5 ENSMUSG00000033790 ENSMUST00000032627,ENSMUST00000094359,ENSMUST00000068721,ENSMUST00000107577 2 4 4 98 7 63070412 63070430 AGCAGATCATAATGGCTGG 59 63070492 63071839 TTCTTTCTGCATCTCTGGC 59 NA Mus musculus 50 Ston1 ENSMUSG00000033855 ENSMUST00000064035,ENSMUST00000112216 3 2 2 60 17 89035928 89035948 GGATTGCTATTCTTGACTACC 58 89035969 89035988 GACTGTTCAAATTCTTCAGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp446 ENSMUSG00000033961 ENSMUST00000045810,ENSMUST00000108535,ENSMUST00000108536 2 3 5 80 7 13564988 13565245 GGAGATGGTATCTCCAAGTG 59 13565287 13565306 GATATGGAGACCGTTTCCTG 59 NA Mus musculus 50 4632417N05Rik ENSMUSG00000034308 ENSMUST00000037955 3 1 1 150 8 120188969 120195115 ATAACAGGTCCAGTTGTCC 58 120187683 120187701 TGTCAAACAGAATCACACG 58 NA DesignNoJunction, InUTR Mus musculus 50 Chrnb4 ENSMUSG00000035200 ENSMUST00000034854 3 1 1 112 9 54883435 54884212 GTGTTGTACAACAATGCCG 59 54883341 54883359 CAGGCACTCTTGTAGATGG 59 NA Mus musculus 50 Epn1 ENSMUSG00000035203 ENSMUST00000108570,ENSMUST00000098845,ENSMUST00000045277 3 3 3 122 7 5044976 5045506 GGAGCACGATAAGGAAGAG 59 5046562 5046581 ACATCAGCAAGATCCATGAG 59 NA Mus musculus 50 Mid1 ENSMUSG00000035299 ENSMUST00000112104,ENSMUST00000112107,ENSMUST00000112108,ENSMUST00000036753,ENSMUST00000112105,ENSMUST00000078947,ENSMUST00000079443 3 7 7 133 X 166422003 166422936 GATTACCTAACAGCTCCCA 58 166423032 166423051 AATATGGTGTACTGGAGCTC 58 NA Mus musculus 50 Ccl2 ENSMUSG00000035385 ENSMUST00000000193 1 1 1 75 11 81850029 81850049 AAGATGATCCCAATGAGTAGG 58 81850086 81850429 AAACTACAGCTTCTTTGGG 57 NA DesignNoJunction Mus musculus 50 Tnfsf9 ENSMUSG00000035678 ENSMUST00000039490 1 1 1 116 17 57245225 57245243 ATAATGCAGACCAGGTCAC 59 57246466 57246484 TTGTATTGCACAACGATGC 59 NA DesignNoJunction Mus musculus 50 Kcnc2 ENSMUSG00000035681 ENSMUST00000092175 2 1 1 81 10 111895699 111899027 GAATCAGGAAAGCAAGCAC 59 111899072 111899090 TTCCAATGAGCTTCTGGTC 59 NA Mus musculus 50 Usp35 ENSMUSG00000035713 ENSMUST00000094177 2 1 1 106 7 104470632 104470651 ATTGACAAGTGGATCATTGC 58 104470158 104470564 AGCTTAGAGAAGACCTTCTC 58 NA Mus musculus 50 Igfbp7 ENSMUSG00000036256 ENSMUST00000046746,ENSMUST00000072884 2 2 2 119 5 77781027 77781045 GATCACTCTGGAGTTCAGC 59 77780368 77780944 TAGAGGAGATACCAGCACC 59 NA Mus musculus 50 Rps27l ENSMUSG00000036781 ENSMUST00000040917 2 1 1 80 9 66794685 66794703 ACATAAGAAGAAACGGCTG 57 66794744 66795412 GTAGTAATCTTGTAGCAACCTG 58 NA Nonspecific Mus musculus 50 Trpv5 ENSMUSG00000036899 ENSMUST00000031901 1 1 1 80 6 41620985 41624236 TCCAAGAAGAAAGAGGCTC 58 41620923 41620944 TCCATATTTCTTCCACTTCAGG 59 NA Mus musculus 50 Azgp1 ENSMUSG00000037053 ENSMUST00000035390 3 1 1 102 5 138428930 138430789 CTGGACCGAATAGATCCTC 58 138430855 138430873 TTCTTTGTGGGTAGAAGCC 59 NA Mus musculus 50 Fgf2 ENSMUSG00000037225 ENSMUST00000108120 2 1 3 141 3 37279912 37295125 ATCAAACTACAACTCCAAGC 58 37303551 37303570 GTCGTTCAAAGAAGAAACAC 57 NA DesignNoJunction Mus musculus 50 Cisd1 ENSMUSG00000037710 ENSMUST00000045887 3 1 1 98 10 70799004 70799022 CTTCGACATGGAGGATCTG 59 70793837 70793855 TCGTTGTGCTTTATGTGAG 58 NA DesignNoJunction Mus musculus 50 2810002N01Rik ENSMUSG00000037787 ENSMUST00000040519 3 1 1 142 12 112962572 112962591 TCAAGACTACAAGCTAAGGG 58 112968314 112971886 TACCAGTCTCGGTTATAGC 57 NA Mus musculus 50 BC016495 ENSMUSG00000037847 ENSMUST00000042392 3 1 1 81 19 18714086 18714381 TGACTTCTTCAAGCCAGAG 59 18715614 18715633 CATATTTAGCGCTTCAAGCA 58 NA Mus musculus 50 Pcdh18 ENSMUSG00000037892 ENSMUST00000035931 1 1 1 86 3 49557259 49557277 ATTCTCCGATAGACAGGCT 59 49549182 49557209 TACATAGCCTCATTGCTGC 59 NA Mus musculus 50 Cep250 ENSMUSG00000038241 ENSMUST00000109619,ENSMUST00000039994,ENSMUST00000109618,ENSMUST00000094421 2 4 4 81 2 155790766 155790784 CAATCTATGGCGAGAGGTG 59 155790829 155791064 TAGCTCTGTCAGGTCTCTG 59 NA Mus musculus 50 Usp38 ENSMUSG00000038250 ENSMUST00000042724 3 1 1 80 8 83517280 83519590 GGCAGTAAAGGACTTTCCT 59 83517218 83517236 TTGGATTGAGAAGTCCAGG 58 NA Mus musculus 50 Scgb3a2 ENSMUSG00000038791 ENSMUST00000115525 2 1 2 154 18 43926475 43926494 TAGAACATCTGGTGACAGGA 59 43926611 43926893 AAGAGCCTCAAATGATGGG 59 NA Mus musculus 50 Zfp189 ENSMUSG00000039634 ENSMUST00000042964,ENSMUST00000107696 1 2 2 100 4 49535299 49535320 GAGAAGCCTGTATAAAGATGTC 58 49541915 49541933 CTTCTTTCACAGTTGGCTC 58 NA DesignNoJunction Mus musculus 50 Tbc1d13 ENSMUSG00000039678 ENSMUST00000044556 1 1 1 82 2 29992889 29996000 CTTTGAGGACCATCCTCTG 59 29996046 29996064 CAATCTGGAGTAGCACCTC 59 NA Mus musculus 50 Rbms2 ENSMUSG00000040043 ENSMUST00000076233 2 1 4 88 10 127572163 127574549 CTCCTGTGTTCCTATCAGG 58 127572093 127572111 GTAAGAGGTCCCATCATGG 59 NA Mus musculus 50 Pacsin1 ENSMUSG00000040276 ENSMUST00000114873,ENSMUST00000045896,ENSMUST00000114872,ENSMUST00000097360 3 4 4 82 17 27839732 27839750 AAGATCGAGAAGGCATACG 59 27839795 27841802 CCATACTGAGGACCTTTCTC 59 NA Mus musculus 50 C1qtnf4 ENSMUSG00000040794 ENSMUST00000111466,ENSMUST00000036860 1 2 2 61 2 90730391 90730409 CTACTTAGCCACGATCACG 59 90730434 90730452 AAAGTGATGTACTTGCCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Plekhh2 ENSMUSG00000040852 ENSMUST00000047206 2 1 1 80 17 84959443 84959464 CAGAATCTTCGTTTCATCAACC 59 84959504 84963171 CTTCTCTTGGAGTTCTTGCA 59 NA Mus musculus 50 Arhgef1 ENSMUSG00000040940 ENSMUST00000098683,ENSMUST00000047873,ENSMUST00000108423,ENSMUST00000108424 2 4 4 151 7 25707933 25708040 GAACACAGAGGAGTCTACAG 59 25708407 25708425 GTAGGTGAGTCAAGTCCAG 59 NA Mus musculus 50 Lrrc29 ENSMUSG00000041679 ENSMUST00000070508 3 1 1 122 8 107837038 107837056 TGACATTGAGTCACTGCAG 59 107836835 107836953 TATCCAGAGTTTGCTCTGTG 59 NA Mus musculus 50 Myo3b ENSMUSG00000042064 ENSMUST00000060208,ENSMUST00000100044,ENSMUST00000112240,ENSMUST00000112243,ENSMUST00000112241 2 5 5 123 2 69943799 69946685 TCGTTGACTTTGGTGTCTC 59 69964920 69964938 TAGGACGAGTCATACTGCT 59 NA Mus musculus 50 Olfr631 ENSMUSG00000042219 ENSMUST00000059011,ENSMUST00000106863 2 2 2 60 7 111077363 111077383 TTTAGCCCTATGTTCTACCTC 58 111077405 111077423 AGATCCAGTGTTCAAAGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mfap4 ENSMUSG00000042436 ENSMUST00000040522,ENSMUST00000064783 1 2 2 123 11 61298962 61298980 CTCTCAACTGAGCTGACAC 59 61299302 61299552 GACTTCTCCAGAGCATCTC 59 NA Nonspecific, InUTR Mus musculus 50 Rgs8 ENSMUSG00000042671 ENSMUST00000041776,ENSMUST00000111812,ENSMUST00000111810 2 3 3 60 1 155538149 155538167 CCACAGGATCTTTGAGGAG 59 155538190 155539869 GAAATCGATATTCACCTCCC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 4732471D19Rik ENSMUSG00000043183 ENSMUST00000068431,ENSMUST00000058174 2 2 2 93 13 54630576 54638452 GAGGAAGAGGGACAAACTC 59 54638509 54638527 GTCTCCTCAAGATCTGCTG 59 NA Mus musculus 50 Uevld ENSMUSG00000043262 ENSMUST00000094398 1 1 1 84 7 54203335 54203353 CTATTCCATACCGTCGTCC 59 54200706 54203287 TATGTCTGAGACACCTTCC 57 NA DesignRelaxed Mus musculus 50 Diras1 ENSMUSG00000043670 ENSMUST00000055125 2 1 1 69 10 80484899 80484917 TTTATCCTGGTGTTCTCGG 58 80484848 80484866 CGATCAACTTGTAGATGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pcdhb14 ENSMUSG00000044043 ENSMUST00000052387 2 1 1 60 18 37608662 37608681 TTCCTTTCCTCTTGAAACCT 58 37608704 37608722 AGTGCTCTTTCAGTTACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr794 ENSMUSG00000044293 ENSMUST00000059957 1 1 1 60 10 129008089 129008107 AGCCCTTGCACTATATGAC 59 129008131 129008149 CAACAGAGGACAAGGATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 AB041803 ENSMUSG00000044471 ENSMUST00000115107,ENSMUST00000050386 1 2 2 152 6 31131133 31147781 CTGCATCTCGTTGATTCCT 59 31116616 31116634 GAGTCAGGTATCTGTGCAG 59 NA DesignNoJunction Mus musculus 50 A330102K23Rik ENSMUSG00000044647 ENSMUST00000112397,ENSMUST00000112395,ENSMUST00000053910,ENSMUST00000112394 3 4 4 85 2 65857780 65860032 GCATTAAGTGTCAGGTGGA 59 65860078 65860099 GAATTCAATTCTACCTGCTGTG 59 NA Mus musculus 50 E230025N22Rik ENSMUSG00000044719 ENSMUST00000115682,ENSMUST00000052890 2 2 2 80 18 36854386 36854404 GCTGTTTGAAGAAGCTCTG 59 36852761 36854343 CCAATACGGTTAATCTGCAC 58 NA Mus musculus 50 D1Ertd622e ENSMUSG00000044768 ENSMUST00000053033 3 1 2 81 1 99542938 99551196 ATCATCTGGGATTTAGTCTGG 58 99542877 99542895 CAGGGTACTTCTGGAATCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Bola3 ENSMUSG00000045160 ENSMUST00000055875 3 1 1 195 6 83301285 83301303 GAATGTTTGCCTCTCAGAC 58 83303114 83308148 TTTAGTGCCTGATTGACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr123 ENSMUSG00000045202 ENSMUST00000054748 3 1 1 60 17 37932864 37932882 AACAATCACTCTTTGGCTC 57 37932906 37932924 TTCACAGAAGAAGTGGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rbm15b ENSMUSG00000045365 ENSMUST00000055843 2 1 1 60 9 106787083 106787101 CTATGCACATCCTTGAGGG 59 106787041 106787060 GAAGGATGGTCTTTGAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmprss12 ENSMUSG00000045631 ENSMUST00000096200,ENSMUST00000050474 2 2 2 81 15 100112850 100115566 AGAGGCTAGAGATCCTCTG 59 100115610 100115629 TATATTCCTGCTGTGGTAGG 58 NA Mus musculus 50 Iqub ENSMUSG00000046192 ENSMUST00000052277 2 1 1 80 6 24412024 24429153 TCTGGATAAGTGTTCAGCTC 59 24411963 24411983 CTTATCGTGAACTGTGTATCC 58 NA Mus musculus 50 Cyb561d1 ENSMUSG00000048796 ENSMUST00000106655,ENSMUST00000065664 2 2 3 84 3 108003079 108003694 CTATGCATTCCATGGAGGT 59 108002604 108002623 TAGAATAGCTTCAGCCATGC 59 NA DesignNoJunction, InUTR Mus musculus 50 Zfp689 ENSMUSG00000048921 ENSMUST00000053392 1 1 1 60 7 134591881 134591899 GAGATGGGTAACATTCCAG 57 134588614 134588632 TACGTCCTTCTCTTCAGTC 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Nr1h5 ENSMUSG00000048938 ENSMUST00000058899 1 1 1 80 3 102749214 102749234 GAGTGAACTTCATGTATCGGA 59 102745025 102749172 TTAAGGCATGGACGATCTG 59 NA Mus musculus 50 Sall2 ENSMUSG00000049532 ENSMUST00000058326 2 1 1 60 14 52932975 52932993 GAAGAAGTGGCAACATCAG 58 52932933 52932953 TCTCATTACTGTCCATCTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930474N05Rik ENSMUSG00000049546 ENSMUST00000055320 3 1 1 94 14 36908595 36908614 GGAGACCACTTCTTTGTCTC 59 36908669 36909591 TATGGATACCTCATGAACAGC 59 NA Mus musculus 50 Lrrc19 ENSMUSG00000049799 ENSMUST00000107101,ENSMUST00000053419 3 2 2 80 4 94307654 94310002 AGCTTCTGAAACAGAAGTC 57 94307592 94307612 GTAACATTGGTACTGATACCC 57 NA Mus musculus 50 Zbtb11 ENSMUSG00000050077 ENSMUST00000050248 2 1 2 114 16 56000736 56000755 TCAAAGTCTGCATCAATCAC 58 56000832 56002835 GTACTTGGACTCTCCTGTG 59 NA Mus musculus 50 Olfr622 ENSMUSG00000050085 ENSMUST00000058744 2 1 1 60 7 110788040 110788058 TATGGAATTTCAGTGGCCC 59 110787998 110788017 AAGATGTTGCTATGAGTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tcf19 ENSMUSG00000050410 ENSMUST00000095309 1 1 1 77 17 35652868 35652886 GAATTGCATGCTGAACTCC 59 35651952 35652827 ATTGACCAAAGTCCCTTGG 59 NA DesignRelaxed Mus musculus 50 Hamp ENSMUSG00000050440 ENSMUST00000062620 3 1 1 93 7 31727591 31727692 GACATTGCGATACCAATGC 59 31727516 31727535 CACACTGGGAATTGTTACAG 58 NA Mus musculus 50 BC022960 ENSMUSG00000050528 ENSMUST00000052299 1 1 1 60 X 165807235 165807254 CTCATTATGCAAGAGATCGG 58 165807276 165807295 GTTGATTCTCTGACGAAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr335 ENSMUSG00000051052 ENSMUST00000050332 1 1 1 60 2 36157801 36157819 GGTGTCTTTGTACTATGGG 57 36157843 36157861 GGAGTTCTGGAATGAAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Nat2 ENSMUSG00000051147 ENSMUST00000093470 3 1 1 60 8 70025705 70025725 CTATTCCTTTACTCTTGAGCC 57 70025745 70025765 AAGGTAGGTATTCATGGACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pcdh1 ENSMUSG00000051375 ENSMUST00000057185 2 1 3 102 18 38362471 38362489 TTGATACAAACGACAACGC 59 38359172 38362406 TTAGCTTTCACCTGGATGAC 59 NA Mus musculus 50 Nanos2 ENSMUSG00000051965 ENSMUST00000063563 3 1 1 63 7 19573220 19573238 CATCCTGAGGCACTATGTG 59 19573265 19573283 CTTGAGTGTATGAGCCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 F730043M19Rik ENSMUSG00000052125 ENSMUST00000101487 1 1 2 178 12 33832145 33832163 TCCATCCTTATCCCTCAGG 59 33825973 33827512 ACGTTCACTAATCCTGCTG 59 NA InUTR Mus musculus 50 Gan ENSMUSG00000052557 ENSMUST00000064488 3 1 1 82 8 119707449 119707470 GATTGAACTTGAAGGGATATCG 58 119707511 119711062 CTTCATTTAACCTGATCTGCC 59 NA Mus musculus 50 Nrk ENSMUSG00000052854 ENSMUST00000113052,ENSMUST00000064937 2 2 2 80 X 135538568 135538587 CTATTCTCGAGAATGAGCTG 57 135538629 135541631 CAAAGAACATCTTGTCACCA 58 NA Mus musculus 50 Ficd ENSMUSG00000053334 ENSMUST00000065698 2 1 1 184 5 114187154 114187172 CTGACAGTCAAGACTACGG 59 114188214 114188232 TCTTCTTCGGAGAAGATGC 59 NA DesignNoJunction Mus musculus 50 Tnfaip6 ENSMUSG00000053475 ENSMUST00000065927 1 1 1 80 2 51907853 51911335 TCATTAGCACAGGAAATGTC 57 51911377 51911396 CGTATTTAATCTGGAAGCCT 57 NA Mus musculus 50 Mast1 ENSMUSG00000053693 ENSMUST00000109741,ENSMUST00000074363 3 2 2 81 8 87445290 87445308 CAGAAACAGTTCTAGCCCT 58 87445120 87445246 GTAATGAGGAGGTTGTCTGG 59 NA Mus musculus 50 BC003885 ENSMUSG00000053740 ENSMUST00000066378 3 1 1 60 18 14729942 14729962 TGGAGACATGATCTCTTTGTG 59 14729983 14730002 AGACTGACCTACAGAGTGAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Chd8 ENSMUSG00000053754 ENSMUST00000089752 1 1 1 80 14 52835965 52835983 AAGTTCTGATCTTCTCCCA 57 52835740 52835924 GTTCATATAAGTACCTCCTCTG 57 NA Mus musculus 50 Dnajc13 ENSMUSG00000054574 ENSMUST00000060084 3 1 1 80 9 104123784 104123802 AAAGCACTCAAGAGAAGCA 59 104122297 104123742 ATCATGCATAGGACACATGAG 59 NA Mus musculus 50 Slc8a1 ENSMUSG00000054640 ENSMUST00000071424 3 1 4 170 17 81844933 82047167 TCCAGAACGATGAAATAGTC 57 81844268 81844286 TTCTCATATTCCTCACGGT 57 NA DesignNoJunction Mus musculus 50 Emcn ENSMUSG00000054690 ENSMUST00000067877,ENSMUST00000067858,ENSMUST00000098588,ENSMUST00000106260 2 4 4 95 3 137079689 137079707 TACTCAACTACTGGATGCC 58 137079765 137080019 TCCTCAGTATCTTGAAGCAG 58 NA Mus musculus 50 Cd47 ENSMUSG00000055447 ENSMUST00000084838 2 1 2 81 16 49869182 49884285 GTTGCAAATTAGTTTCGTGG 58 49884329 49884347 CAGAACAGGAGTATAGCCA 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Cdca7 ENSMUSG00000055612 ENSMUST00000102691,ENSMUST00000069280 1 2 2 174 2 72319992 72320490 AGAACAAAGCAATGCTTGC 59 72321470 72321488 GTAAGAGGTCGAGTTCTCC 58 NA DesignRelaxed Mus musculus 50 Mettl4 ENSMUSG00000055660 ENSMUST00000095180 2 1 1 80 17 95126724 95132437 CTCTTACCGAAGTTCTGAGAG 59 95126664 95126682 AACCTGGCTGTAAATTCCT 58 NA Mus musculus 50 1810010K12Rik ENSMUSG00000056329 ENSMUST00000070378 2 1 1 104 2 19374170 19374188 CTTTGCGCATGGAAATCTC 59 19374255 19374274 TTAGAAGAAGTCTTGGGCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Uts2d ENSMUSG00000056423 ENSMUST00000070531 1 1 1 86 16 27364804 27364823 GAAATCCTGGTTTACAGAGG 57 27361103 27363075 CTCTCAACTTCTTTACCTGTC 57 NA Mus musculus 50 Zfp558 ENSMUSG00000056712 ENSMUST00000034647 1 1 1 60 9 18261111 18261130 CATGAATGTTCTCAGTGTGG 58 18261070 18261089 TATTATGTCCAGTGAGCGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Q80WP8-2 ENSMUSG00000056880 ENSMUST00000084841 1 1 1 117 9 115930942 115939870 TGATGGAGCCTGAATATACC 58 115950021 115950040 CAGATAAACTGGACTGTCCT 58 NA Mus musculus 50 Cep110 ENSMUSG00000057110 ENSMUST00000113037,ENSMUST00000028237,ENSMUST00000113033,ENSMUST00000113034,ENSMUST00000045111 1 5 7 97 2 34993321 34996018 GTACTCAGTTAGAGCAATCG 57 34996078 34996096 TTTCTCTTCTGAGGACTGG 58 NA Mus musculus 50 Rpgrip1 ENSMUSG00000057132 ENSMUST00000111603,ENSMUST00000111600,ENSMUST00000111599 2 3 3 80 14 52769243 52769262 GGATGAGAACAAAGATGTCC 58 52769304 52769579 GTAGATGCTATCTGGTCCTG 59 NA Mus musculus 50 1700042B14Rik ENSMUSG00000057402 ENSMUST00000076671,ENSMUST00000112556 2 2 2 62 X 151559759 151559778 TAAACATAGACAAGACGCCC 59 151559716 151559736 GCATTTCAAGGCTATGTAACG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zfp371 ENSMUSG00000058028 ENSMUST00000072662 1 1 1 114 7 6182036 6182054 CTAATTTGCATGCCACCAG 59 6182131 6182948 AGATTATGGACCAGTTGTGG 59 NA Mus musculus 50 EG432555 ENSMUSG00000058163 ENSMUST00000109212 1 1 3 172 11 48715508 48715637 TAAGGACAAGGAAGAGCAC 58 48709061 48715374 TTGATGATACTGTTCCTGAGC 59 NA Nonspecific, InUTR Mus musculus 50 Rnf207 ENSMUSG00000058498 ENSMUST00000076183 1 1 1 91 4 151685603 151685891 GATCTATGAAGCCCAGCTC 59 151685530 151685548 GTATGTAGGGCGTGATCTG 59 NA Mus musculus 50 Csf2ra ENSMUSG00000059326 ENSMUST00000076046 1 1 1 232 19 61301837 61301855 CTTCCAGTTTGAGGTCCAG 59 61301276 61301294 CTGTCACTGCATACAGGAG 59 NA DesignNoJunction Mus musculus 50 Tas2r120 ENSMUSG00000059382 ENSMUST00000071707 1 1 1 60 6 132607181 132607199 GTTTACTCCAGACACAGAC 57 132607222 132607241 TATAGCCCAGGTAATTCCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG667823 ENSMUSG00000060441 ENSMUST00000098179 1 1 1 89 7 111423301 111425129 AATACTACAGGGTGTGGAG 57 111415024 111415042 AACTTTCTTTGTTCCCTGG 57 NA Nonspecific Mus musculus 50 Olfr823 ENSMUSG00000060564 ENSMUST00000081469 3 1 1 69 10 129549713 129549731 TCTGGTCATTGTATTGGGA 57 129549662 129549680 TGGTGTATGAAGTCTGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr503 ENSMUSG00000060759 ENSMUST00000078162 2 1 1 62 7 115688408 115688426 CTCTGGACCACTATGTAGC 58 115688452 115688470 TAGGATTGGTGAGAATGGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Etd ENSMUSG00000060967 ENSMUST00000074232 3 1 1 64 X 50796542 50796560 GAAGCCTGCCAATATTCTG 58 50796588 50796606 CCATATCATTTCTGGGCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lsamp ENSMUSG00000061080 ENSMUST00000099761,ENSMUST00000078873 3 2 2 80 16 42144132 42144150 CTTCCCTCAAATGTGAAGC 58 42144194 42144678 TTGCACTGTTTATCCTGGT 59 NA Mus musculus 50 Olfr320 ENSMUSG00000061344 ENSMUST00000082307 1 1 1 60 11 58498139 58498157 GGACTCTCCACATATACCC 58 58498181 58498199 CCACTACTTTGTCCCTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr301 ENSMUSG00000061549 ENSMUST00000073222 2 1 1 60 7 93560936 93560954 CAGGATCCTTCTCAGTGTG 59 93560978 93560996 AAGATTCCCTATCAGGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Defb39 ENSMUSG00000061847 ENSMUST00000075504 3 1 1 62 8 19064787 19064807 AAGATCTCCTACTTTCTGCTG 59 19053012 19064763 AGAAACTGGGTTGATCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC048679 ENSMUSG00000061877 ENSMUST00000073406 2 1 1 91 7 88640076 88640094 CTATGGACAACGATCCTCC 59 88639256 88640022 CATTGACATTGAGTCCATGC 59 NA InUTR Mus musculus 50 Lmnb2 ENSMUSG00000062075 ENSMUST00000057623,ENSMUST00000105332 1 2 2 75 10 80366776 80366870 CTTCAGACAAGGACCAGTC 59 80366719 80366737 TTGTAGGCAATGTCCTCAC 59 NA DesignRelaxed Mus musculus 50 Ppox ENSMUSG00000062729 ENSMUST00000073120 2 1 1 80 1 173210568 173210586 CGATCTTTGAACTTGGACC 58 173210374 173210524 CAAGTTCAGAAACCAGGAG 57 NA Mus musculus 50 Tmed5 ENSMUSG00000063406 ENSMUST00000061203 1 1 2 80 5 108559089 108559108 TGATTTCCACCTTACCTCTC 58 108548419 108559047 CAGTAAACCGTATGAACACC 58 NA Mus musculus 50 B9d2 ENSMUSG00000063439 ENSMUST00000108403 3 1 1 224 7 26468422 26471004 TAAAGGTCTCCAAGGTTGG 58 26471192 26471210 CTGTAGATGGTATCTGCGT 58 NA DesignRelaxed Mus musculus 50 Scgb3a1 ENSMUSG00000064057 ENSMUST00000076006,ENSMUST00000043873 2 2 2 92 11 49478040 49478058 TAGAGGGATCCAGGAAGTG 59 49478476 49478494 CTCAACCGAACATTGTCAG 58 NA DesignNoJunction Mus musculus 50 mmu-mir-224 ENSMUSG00000065542 ENSMUST00000083608 2 1 1 61 X 69506413 69506432 GGTTCCGTTTAGTAGATGGT 59 69506371 69506389 GGCTTTGTAGTCACTAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ipo7 ENSMUSG00000066232 ENSMUST00000084731 3 1 1 81 7 117191701 117191719 AAGCAGTTACTGCTATGGG 59 117191763 117192318 TGCTGGGTTATCTCTTTGTG 59 NA Mus musculus 50 EG330503 ENSMUSG00000066647 ENSMUST00000085668 1 1 1 80 7 30960897 30960916 TCTTCTTATTGGAGCAAGGG 59 30960959 30962674 TTGTCTTCAAGTCTGGGTG 59 NA InUTR Mus musculus 50 EG628991 ENSMUSG00000067679 ENSMUST00000088198 3 1 1 151 X 75436442 75436795 ACATGAAGATACCTGTCCAG 58 75437509 75437527 TATCATCACTGCACAGGAG 58 NA InUTR Mus musculus 50 EG408191 ENSMUSG00000067716 ENSMUST00000088296 3 1 1 120 1 32602505 32602523 GATTCCATCGGACAGACAG 59 32602403 32602421 CCATACTGTACTGCTTCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG629678 ENSMUSG00000067973 ENSMUST00000088880 3 1 1 81 14 77880981 77880999 AGCACCATTTGAAGTTCTG 58 77879965 77880937 TTGATCCTTACCTTCAACCA 58 NA Mus musculus 50 BC049702 ENSMUSG00000068149 ENSMUST00000089246 3 1 1 113 X 19057813 19057831 ACCAAGGCCTCTAATTGTG 59 19056694 19057737 TCTAGAACTGTTAGGGATGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1189 ENSMUSG00000068808 ENSMUST00000090700 2 1 1 60 2 88432172 88432192 TTACTCTTCTGTCATTGCTCC 59 88432211 88432232 GACAATAGTCCTCTCAGAAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1143 ENSMUSG00000068815 ENSMUST00000090708 2 1 1 60 2 87643127 87643147 TCAGATACACAGGTCAATGAG 59 87643169 87643187 TGCTCAATTCAATGAACCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hist1h2bc ENSMUSG00000069303 ENSMUST00000110467 1 1 3 279 13 21926008 21927180 CAGCTCCAAGTGATTTGTG 59 21927844 21927863 GGCACAAGTGTTAATTTACC 57 NA DesignNoJunction, InUTR Mus musculus 50 Ahnak ENSMUSG00000069833 ENSMUST00000088050 2 1 5 97 19 9090655 9090673 AACTTGAAAGGTCCCAAGG 59 9090733 9090753 AGAAACACTAAAGAGGGTGC 59 NA Mus musculus 50 Olfr143 ENSMUSG00000070310 ENSMUST00000093865 2 1 1 60 9 38061334 38061354 GTGAACTCTGAGAGTTATGTG 58 38061375 38061394 TACAAATAGCCACATAGCGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 9230110K08Rik ENSMUSG00000070569 ENSMUST00000094445 2 1 1 60 4 151237019 151237037 GAGGAAAGGATGGAAGGAG 59 151237061 151237079 TCTATGTGCGGAATTCCTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 EG574429 ENSMUSG00000070799 ENSMUST00000094798 1 1 1 81 7 19060679 19063644 CAACATCCACAAGCTTGTG 59 19060616 19060634 AGTGAAGACAACTGAGCTC 59 NA Nonspecific Mus musculus 50 6330408A02Rik ENSMUSG00000070814 ENSMUST00000108532 3 1 2 75 7 13846231 13846250 CCTCAGAGGGTGTTAATGG 59 13846174 13846193 TTCTCTTTCTCCATCCTTGC 59 NA DesignNoJunction Mus musculus 50 Gad1 ENSMUSG00000070880 ENSMUST00000094934 3 1 1 80 2 70410910 70412132 TGTTTGCTCAAGATCTGCT 59 70412175 70412194 GGAGTATGTCTACCACTTCC 58 NA Mus musculus 50 Trim75 ENSMUSG00000071089 ENSMUST00000095295 2 1 1 60 8 67506419 67506438 GGAGAGGTTTCTTTCTATGG 57 67506378 67506399 AAGTGTCCCTGAAAGTATAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 LOC634594 ENSMUSG00000071126 ENSMUST00000095364 1 1 1 94 12 115915350 115915368 TTCCTTCTGTCAGGAACTG 58 115915189 115915210 CAGGATATCTTCACTGACCC 59 NA Nonspecific Mus musculus 50 Fpr-rs6 ENSMUSG00000071275 ENSMUST00000095636 3 1 1 60 17 20319683 20319703 CCATGGATCGTTGTATTTGTG 59 20319643 20319662 TTCACAGTTCGATGATTCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Eml3 ENSMUSG00000071647 ENSMUST00000096241 2 1 1 81 19 9008029 9008271 GACTGGGTTTATGGGTACAG 59 9008313 9008333 CAATAAAGTAGACCACCTCCC 59 NA Mus musculus 50 Ing4 ENSMUSG00000072770 ENSMUST00000032481 2 1 3 76 6 125000948 125001385 TACTATGCCAAGGTGAGAC 58 125001425 125001443 GTTACAGACTTGCAAGCTG 59 NA DesignRelaxed Mus musculus 50 AW555464 ENSMUSG00000072825 ENSMUST00000101018,ENSMUST00000092279 2 2 2 80 12 113981689 113981708 GACCAGAACATGAATGACAG 58 113981750 113981892 ATCAAAGATCACCTCCTCAC 59 NA Mus musculus 50 EG546282 ENSMUSG00000073267 ENSMUST00000101667 2 1 1 60 X 24341747 24342080 ATTGGACCTTATGGAAGTACAG 59 24341708 24341726 TTCAGGATTTGCATTCCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Kcnh8 ENSMUSG00000073383 ENSMUST00000097306 3 1 1 80 17 53114796 53114815 AAGAGAAGAACCTGAAAGTG 57 53112250 53114753 TTCCATCAACAATCCTTGG 57 NA Mus musculus 50 Ttbk1 ENSMUSG00000073389 ENSMUST00000097313 1 1 1 114 17 46579547 46579565 CACAGAATGTAACAGCCCT 59 46579451 46579469 ATCTAGTTGTGACAGCGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:3034560 ENSMUSG00000073548 ENSMUST00000097550 1 1 1 60 18 65055571 65055591 GTTGCAGTAATACTCCAAGTG 58 65055613 65055631 ACAAGTCACATGTGATGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073610 ENSMUSG00000073610 ENSMUST00000097634 3 1 1 65 18 33630504 33630523 ACAAGACAAAGAGATGTCCA 58 33632084 33632102 CTATGGAAACTGGAGGTGG 59 NA DesignNoJunction Mus musculus 50 ENSMUSG00000073682 ENSMUSG00000073682 ENSMUST00000088499 2 1 1 60 4 154988440 154988459 CAGACAGAGTAGTGATGAGG 58 154988399 154988418 GATGCTCTTGATTCACACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 4933409K07Rik ENSMUSG00000073872 ENSMUST00000098117 1 1 1 117 4 42566062 42566344 GTTCTTGAATGACCTCAGAC 58 42596102 42596120 CTTTAGCCCTTTGTCTGAC 58 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Fbxw19 ENSMUSG00000074061 ENSMUST00000076617 2 1 1 87 9 109396116 109397139 CTGTGGCATTTGAATTTCG 57 109396047 109396065 ATACAGACAGCAGACTTCC 58 NA Mus musculus 50 6620401M08Rik ENSMUSG00000074093 ENSMUST00000098414 1 1 1 107 7 59258794 59258812 TTTGGACATCCAGTCAGTG 59 59255137 59258723 GACACCGTCCATCTAAGTC 59 NA InUTR Mus musculus 50 EG545952 ENSMUSG00000074169 ENSMUST00000098512 2 1 1 225 7 46517696 46517714 TGAACAATTCCACACCCTC 59 46514497 46517507 GTATCCAGTTCCACCACTG 59 NA DesignRelaxed Mus musculus 50 ENSMUSG00000074215 ENSMUSG00000074215 ENSMUST00000098592 1 1 1 60 8 86588130 86588151 GACTTGAGTTTCCAGATTACAG 58 86588091 86588109 CAACCAAGTCTTCTAGGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Amy2 ENSMUSG00000074267 ENSMUST00000098671 2 1 1 60 3 113091566 113092317 AATGATGCTTATCAGGTCAG 57 113091525 113091543 TCTCAAGTGCAAGATCCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000074847 ENSMUSG00000074847 ENSMUST00000099425 2 1 1 93 13 65361434 65361452 CTCCTCAGGAATGACATCC 59 65361509 65361527 AAGATTCAGAGAAGCTGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074853 ENSMUSG00000074853 ENSMUST00000099430 3 1 1 80 10 81641654 81641674 CCTACATTAGCTATGTTGCTG 58 81641715 81641734 TAAAGACTGTGCTGTTTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Spata5l1 ENSMUSG00000074876 ENSMUST00000099458 1 1 1 115 2 122458339 122458357 GATTTAGGTCTCCTGGCAG 59 122458435 122459473 CTCCATCCGTGATACTTCTC 59 NA Mus musculus 50 2900009I07Rik ENSMUSG00000074922 ENSMUST00000099556 1 1 1 85 19 24551073 24551091 TAACTCACCAGCGAAAGTC 59 24551006 24551027 GTTCATCTACTGGAATAAAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1239 ENSMUSG00000075088 ENSMUST00000099780 3 1 1 60 2 89257817 89257836 GTAGTCCTCTTCTTTGTTCC 57 89257776 89257794 TGGGTAAAGTAGATGGAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1214 ENSMUSG00000075110 ENSMUST00000099804 1 1 1 60 2 88828249 88828267 TTGGTTTACCTTGCAACTC 58 88828207 88828225 GACTGTAGACAATGGTCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1107 ENSMUSG00000075163 ENSMUST00000099865 2 1 1 60 2 86912053 86912071 CTCTACTGTCATTGCTCCT 58 86912011 86912030 TGTGCTAGACTTGTGTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fign ENSMUSG00000075324 ENSMUST00000102728 3 1 1 123 2 63818945 63934959 TGTTTATGGCTTGAAGATGC 58 63818841 63818862 CTGTAAATGACCTCTATAGGCT 58 NA Mus musculus 50 ENSMUSG00000075607 ENSMUSG00000075607 ENSMUST00000100552 3 1 1 61 14 56152035 56152054 GGTCTTTCAAAGAGTTCCAC 58 56151993 56152011 CTGAACAGGAAGTCTACGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Oxct2b ENSMUSG00000076438 ENSMUST00000102648 3 1 1 64 4 122794955 122794973 AAGTGAACCACTCAAAGGG 59 122795001 122795019 GATGTCATCTACCGACGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 IGLV1 ENSMUSG00000076934 ENSMUST00000103746 1 1 1 112 16 19085530 19085550 GCCTGGATTTCACTTATACTC 58 19085345 19085363 AGTGTGACTGTTTCACCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700094D03Rik ENSMUSG00000078667 ENSMUST00000029551 1 1 1 84 3 89868462 89869435 AAACAGCTACTAGTGGTCC 58 89869483 89869501 TCTGATTGAGTTCCTGCTG 59 NA Mus musculus 50 Ceacam15 ENSMUSG00000078795 ENSMUST00000108498 2 1 1 81 7 17258571 17258591 GGATTCTACACGTTACAAACC 58 17257544 17258531 TCACGATCTTGTATACTTGGAG 59 NA Mus musculus 50 Eif5a ENSMUSG00000078812 ENSMUST00000071026,ENSMUST00000070996,ENSMUST00000043419,ENSMUST00000108612,ENSMUST00000108611,ENSMUST00000108610,ENSMUST00000108613,ENSMUST00000108609,ENSMUST00000108608,ENSMUST00000108607 1 10 10 161 11 69731420 69731438 TCAAACGGAATGACTTCCA 59 69730994 69731107 GCACTGTGATCAGGATCTC 59 NA Mus musculus 50 NP_001096035.1 ENSMUSG00000079036 ENSMUST00000110154 2 1 1 82 12 88770207 88772354 TTCAGCTTTGGACAGTCTG 59 88770143 88770161 CCACTGTGCATAAACATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000068790 ENSMUSG00000079376 ENSMUST00000112760,ENSMUST00000112759,ENSMUST00000112758 3 3 3 81 14 5547485 5547505 CAATGACATGGAGGAAATGTG 59 5546475 5547445 GTTGAATTCAGTGTTCATCCTG 59 NA Nonspecific Mus musculus 50 Tmem179b ENSMUSG00000079437 ENSMUST00000010249 2 1 1 87 19 8847589 8847791 CCTTACAATTAGCTGCTCTG 58 8847521 8847539 AGCAGTATGTAGGTTGGAG 58 NA Mus musculus 50 AI661453 ENSMUSG00000079447 ENSMUST00000037701 3 1 1 110 17 47583607 47600908 CTTTCATTCCTCTGAATGCC 58 47602630 47602648 CATTCACTAGTGTGCTGGT 59 NA Mus musculus 50 Sssca1 ENSMUSG00000079478 ENSMUST00000025885 1 1 1 288 19 5730708 5731254 TAAAGATAACCCGGCACTG 59 5730438 5730456 ACTAGTCTCCAAGGAGGTG 59 NA DesignRelaxed Mus musculus 50 Cep192 ENSMUSG00000079613 ENSMUST00000059254 3 1 1 80 18 67976503 67978430 AATCAAAGCAGAGGATGTG 57 67978472 67978492 ATAAGTAGATCTGAGGGTCTC 57 NA Mus musculus 50 OTTMUSG00000017155 ENSMUSG00000079631 ENSMUST00000115171,ENSMUST00000115172 3 2 2 134 X 34996581 34996599 ACCATAGATTCACCCAGTG 58 34998568 34999777 GAAACCATCTCTTCACTATGG 58 NA Nonspecific Mus musculus 50 NP_001079002.1 ENSMUSG00000079859 ENSMUST00000094983 1 1 1 60 4 88440832 88440850 TATCTGAAGGCAAAGGCAC 59 88440874 88440892 CTTGCAATTGGACTCTGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Ubfd1 ENSMUSG00000079869 ENSMUST00000115985 1 1 1 60 7 129225260 129225278 CTTCTTGCTACCATTCAGG 57 129225301 129225320 AAGTTTAAAGACAGAGGGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Scoc ENSMUSG00000080138 ENSMUST00000116270 3 1 1 86 3 135626779 135626927 TTAAGAGTTGGTCGGAGAG 58 135626711 135626729 TAATGAACGGTCTTGTGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Itgb2l ENSMUSG00000000157 ENSMUST00000000161,ENSMUST00000113773,ENSMUST00000113772 2 3 3 80 16 96650709 96652184 AACGCCTACAGTAAACTCTC 59 96650648 96650668 GGAGTCGTAGGTAACTTTCAG 59 NA Mus musculus 50 Mgl1 ENSMUSG00000000318 ENSMUST00000000327,ENSMUST00000102571,ENSMUST00000100954 1 3 4 97 11 69983757 69983927 GAAAGGCTTTAAGAACTGGG 58 69983987 69984005 GACCACCTGTAGTGATGTG 59 NA Mus musculus 50 0610009O03Rik ENSMUSG00000001082 ENSMUST00000001109,ENSMUST00000114329,ENSMUST00000114331 2 3 3 124 5 34977120 34977138 TTCCTCTTAATTGGCTGGG 59 34976860 34976950 CCTGGAGAACCATAACTGG 59 NA Mus musculus 50 Csn3 ENSMUSG00000001622 ENSMUST00000001667,ENSMUST00000113267,ENSMUST00000113271 3 3 3 91 5 88356619 88356639 CGTAGTTGTGAATATTCTGGC 59 88358752 88358770 TGTCATTCTTCTCACCACG 59 NA DesignNoJunction Mus musculus 50 Uck1 ENSMUSG00000002550 ENSMUST00000002625,ENSMUST00000113405 3 2 2 192 2 32113860 32113878 TTCTACACCCAGGAGATCC 59 32112171 32113612 CAGCGTACTTCTTAGTCGG 59 NA Mus musculus 50 Pnkp ENSMUSG00000002963 ENSMUST00000107876,ENSMUST00000003044,ENSMUST00000098478 3 3 4 82 7 52115101 52115119 CTTTGACCTAGATGGGACC 59 52115165 52115268 GGTACAGAATCCTCCAGTC 58 NA Mus musculus 50 Crkrs ENSMUSG00000003119 ENSMUST00000107539,ENSMUST00000003203,ENSMUST00000107538,ENSMUST00000092733 3 4 4 81 11 98098089 98102104 CTTATCAGTCGTCTCTGTGG 59 98102146 98102166 GTTTCATGGTGTTGAAGTAGG 59 NA Mus musculus 50 Hlf ENSMUSG00000003949 ENSMUST00000004051,ENSMUST00000107883,ENSMUST00000043658,ENSMUST00000107881,ENSMUST00000107879 2 5 5 101 11 90202283 90207085 CCGATGATTTGAAGGATGAC 58 90202201 90202219 CGATCTGGTTCTCCTTCAG 59 NA Mus musculus 50 Rfx5 ENSMUSG00000005774 ENSMUST00000107260,ENSMUST00000107254,ENSMUST00000107253,ENSMUST00000107255,ENSMUST00000090837,ENSMUST00000029772 3 6 6 84 3 94760521 94760656 CAGTCCAAATATTGCTACAGTG 59 94760701 94760719 CAGATCCCTTCAAGTCGAG 59 NA Mus musculus 50 Spo11 ENSMUSG00000005883 ENSMUST00000109125,ENSMUST00000109126 1 2 3 105 2 172805525 172809534 GGTTTGATGATTCTGTCGG 58 172809603 172810388 ACTTTCAGAATCAGAGCGA 58 NA Mus musculus 50 Tek ENSMUSG00000006386 ENSMUST00000102798,ENSMUST00000071168 3 2 3 93 4 94465958 94470981 CTGATTGTTCGGAGATGTG 58 94471038 94471056 TATCTTCATGGCAGACTCC 58 NA Mus musculus 50 Elavl2 ENSMUSG00000008489 ENSMUST00000107120,ENSMUST00000107111,ENSMUST00000107109,ENSMUST00000107118,ENSMUST00000084426,ENSMUST00000107110,ENSMUST00000107116,ENSMUST00000102799,ENSMUST00000078179,ENSMUST00000008633,ENSMUST00000107124,ENSMUST00000107114,ENSMUST00000107113 2 13 13 122 4 90930777 90930795 AAACTTATACGTCAGCGGG 59 90927668 90930691 CTTGATATGCCAGTGACCT 59 NA Mus musculus 50 Nfib ENSMUSG00000008575 ENSMUST00000107246,ENSMUST00000107250 3 2 8 101 4 81973699 81973718 TCAGATATCCTCCTCACCTG 59 81956280 81973635 AGTCACAAATCCTCAGCTG 59 NA Mus musculus 50 Tnpo1 ENSMUSG00000009470 ENSMUST00000109401,ENSMUST00000040075,ENSMUST00000099273,ENSMUST00000109399 2 4 4 164 13 99623441 99625106 CTTGTATAGCTGATTTCATGCC 59 99622849 99622868 TAATGATCTCCACAAGCTGG 59 NA Mus musculus 50 Apol7a ENSMUSG00000010601 ENSMUST00000010745 1 1 2 81 15 77219517 77219535 GGTGCTAAGTCACAGACTG 59 77219452 77219472 ATGAACCTCTTTGCTCCTG 59 NA Mus musculus 50 Myl2 ENSMUSG00000013936 ENSMUST00000014080,ENSMUST00000111751 1 2 3 111 5 122554866 122554885 CATTCAAGGTGTTTGATCCC 59 122555041 122556693 AACATCTGGTCGATCTCCT 59 NA Mus musculus 50 Acsf3 ENSMUSG00000015016 ENSMUST00000015160 3 1 2 113 8 125307990 125309726 AGAAAGAATCAGGCTGATGG 59 125309802 125309820 ATCTCTGTCATGCCATAGC 59 NA Mus musculus 50 Rxrg ENSMUSG00000015843 ENSMUST00000015987,ENSMUST00000111386,ENSMUST00000111384 1 3 4 113 1 169543983 169544001 TGGCTCTCCGTATAGAGTC 59 169544078 169555072 TTGACCACATTTAGCTGGG 59 NA Mus musculus 50 Cdc6 ENSMUSG00000017499 ENSMUST00000092706,ENSMUST00000093937 3 2 2 100 11 98782039 98782057 ACCAGTCTGAGTGTTTGTC 59 98782121 98782441 CTTCAGAGACACCTTGGTG 59 NA Mus musculus 50 Wfdc2 ENSMUSG00000017723 ENSMUST00000017867,ENSMUST00000109345,ENSMUST00000109344,ENSMUST00000109343 2 4 4 139 2 164391429 164393843 AAATTCTGAGCTTCAGCCT 59 164393946 164393964 AAGGAGATGCTTTCATCGG 59 NA InUTR Mus musculus 50 Etv4 ENSMUSG00000017724 ENSMUST00000107176 2 1 2 121 11 101636719 101636737 CCAGGATCAAGAAGGAACC 59 101635526 101636634 CTTGATGGCGATTTGTCTG 59 NA Mus musculus 50 Myo1c ENSMUSG00000017774 ENSMUST00000102505,ENSMUST00000069057,ENSMUST00000102504,ENSMUST00000108431,ENSMUST00000057572 2 5 6 80 11 75482707 75482725 ATCTTCATCCGATTTCCCA 58 75482769 75483293 GATCTTGGTGGCTAGACTC 59 NA Mus musculus 50 Rhobtb1 ENSMUSG00000019944 ENSMUST00000020101 2 1 2 150 10 68742192 68742211 TTAATTGCCTTGGCAAACAG 59 68748515 68751707 CATTGTGAAACTGTGCCAG 59 NA Mus musculus 50 Epb4.1l2 ENSMUSG00000019978 ENSMUST00000092645,ENSMUST00000092644 1 2 8 83 10 25208892 25221641 AGGGAAAGAGTTCACATGAG 59 25221687 25221705 CTGTGATTACGCTTTCGTC 58 NA Mus musculus 50 Acsl6 ENSMUSG00000020333 ENSMUST00000108902,ENSMUST00000108904,ENSMUST00000101211,ENSMUST00000101213,ENSMUST00000108899 2 5 12 185 11 54143453 54143473 GTTTCACAAGTGGTACAACAG 59 54150645 54151926 AGTAGACAACAGACTGCAC 59 NA Mus musculus 50 Sgcd ENSMUSG00000020354 ENSMUST00000020613 1 1 4 224 11 46946177 47168694 TCACAATTGGTAATGCCCT 59 46896345 46939047 CTTCAGCTCCTAAGACTCTC 58 NA DesignRelaxed Mus musculus 50 Aebp1 ENSMUSG00000020473 ENSMUST00000020766,ENSMUST00000102923 3 2 3 170 11 5766504 5766931 GAAGAGATGAAGAAGCCCA 58 5767650 5767668 TGACTCCATCCCAATAGGT 59 NA Mus musculus 50 Prkar1a ENSMUSG00000020612 ENSMUST00000106677,ENSMUST00000020932,ENSMUST00000049527 2 3 4 83 11 109523625 109524271 GGAGAAATGGATGTCTATGTC 57 109524315 109524334 ATAAATCAAAGCCAGCTCTC 57 NA Mus musculus 50 Cacnb1 ENSMUSG00000020882 ENSMUST00000017552,ENSMUST00000107562 1 2 5 113 11 97871685 97871954 AGAAGCAGAAATCGACAGAG 59 97871212 97871230 TCTGCATCATGTCTGTCAC 59 NA Mus musculus 50 Ctage5 ENSMUSG00000021000 ENSMUST00000043421 3 1 2 104 12 60247335 60247838 TCACAAATATCAGAGGCCAC 59 60247905 60247923 TTTAGCTCGCTCTTCTTCC 59 NA Mus musculus 50 Vrk1 ENSMUSG00000021115 ENSMUST00000021539,ENSMUST00000085026,ENSMUST00000072040 1 3 3 82 12 107289206 107289980 CAGAGCAAATTCAGAAATGG 57 107290025 107290043 ATCATGTAGACCAGATCCC 57 NA Mus musculus 50 A530054K11Rik ENSMUSG00000021510 ENSMUST00000012314 3 1 1 63 13 67724989 67725007 TGATGCTCGAGAACTACAG 58 67724473 67724491 ATCAGATGTGGCTTACACG 59 NA DesignNoJunction Mus musculus 50 Ktn1 ENSMUSG00000021843 ENSMUST00000022391,ENSMUST00000111745,ENSMUST00000111744,ENSMUST00000111743 3 4 6 80 14 48336624 48339878 AAGACTTCCAAGGAAAGACG 59 48339919 48339939 CGTTGGAAATAACCTCTTCAG 58 NA Mus musculus 50 Dph3 ENSMUSG00000021905 ENSMUST00000022461 1 1 3 184 14 32898599 32898617 GGATAACTTTGCCATCACC 58 32894446 32896363 TAGCTTCATTCTGAGAGCC 58 NA InUTR Mus musculus 50 Atp8a2 ENSMUSG00000021983 ENSMUST00000080368 1 1 2 80 14 60390575 60392548 CTTGGACGAAATTCAGTCAC 59 60390514 60390533 AGATGGTTGAATAGACACCG 59 NA Mus musculus 50 Cbx6 ENSMUSG00000022421 ENSMUST00000023060 2 1 6 97 15 79624901 79663955 CTTTCCTCCTAAAGCAGGA 58 79624822 79624840 TAGTTCGTCCATCTTGGAG 58 NA Mus musculus 50 Fgf12 ENSMUSG00000022523 ENSMUST00000100024,ENSMUST00000069654 2 2 2 81 16 28398412 28398430 GGATATTTCCTGCAGATGC 58 28373088 28398370 TTAGATTGAAGAGGGTGTAGTC 58 NA Mus musculus 50 Fhl1 ENSMUSG00000023092 ENSMUST00000023854,ENSMUST00000116596,ENSMUST00000114773,ENSMUST00000114772,ENSMUST00000114770 3 5 8 89 X 54043748 54043766 GGAGGACCAGTATTACTGC 59 54043819 54045030 TTACCAAACCCAGTGATGG 59 NA Mus musculus 50 Fhl1 ENSMUSG00000023092 ENSMUST00000023854,ENSMUST00000116596,ENSMUST00000114773,ENSMUST00000114772,ENSMUST00000114770 1 5 8 80 X 54043757 54043775 GTATTACTGCGTGGATTGC 58 54043819 54045030 TTACCAAACCCAGTGATGG 59 NA Mus musculus 50 Gzma ENSMUSG00000023132 ENSMUST00000023897 2 1 2 167 13 113888587 113891102 CTTATTCCTGAAGGAGGCTG 59 113886540 113888457 TCTCTTTCCCACGTTACAG 58 NA Mus musculus 50 Il15ra ENSMUSG00000023206 ENSMUST00000091456,ENSMUST00000065131,ENSMUST00000114831,ENSMUST00000078834,ENSMUST00000114834,ENSMUST00000114833,ENSMUST00000114832 1 7 7 108 2 11652260 11654781 TACATCAAATCAAGGCAGC 58 11654853 11654871 CTCCTGTGTCTTCATCCTC 59 NA Mus musculus 50 Sfi1 ENSMUSG00000023764 ENSMUST00000081318,ENSMUST00000066391,ENSMUST00000093407,ENSMUST00000101649,ENSMUST00000101655,ENSMUST00000072704 2 6 7 141 11 3086135 3087256 GAACTTCGAATCAGGTGTG 58 3079455 3079473 ATTCTTCCCTCCATTCTCC 58 NA Mus musculus 50 Cuta ENSMUSG00000024194 ENSMUST00000114935,ENSMUST00000025027 3 2 3 107 17 27075553 27075683 GATCACATCCATCTATGAATGG 58 27075363 27075381 CGAACAAACTCTGTCAGAG 58 NA Mus musculus 50 Zdhhc6 ENSMUSG00000024982 ENSMUST00000111683,ENSMUST00000111682,ENSMUST00000111680,ENSMUST00000076891,ENSMUST00000111679 1 5 5 157 19 55379029 55379048 ATTACCAACTGGATGAAGTC 57 55378220 55378909 CTGTTCTATTGTGAGGCTG 57 NA Mus musculus 50 Vti1a ENSMUSG00000024983 ENSMUST00000070075,ENSMUST00000085023,ENSMUST00000111671,ENSMUST00000095950 2 4 4 97 19 55396478 55402844 CAGAGAACTGCTTGAACAG 58 55402904 55402923 TTTCTTGCTTGTAGCTTCTC 58 NA Mus musculus 50 Prdx4 ENSMUSG00000025289 ENSMUST00000112546 1 1 3 133 X 151769487 151774858 GTAATGATCTCCAAGCCAG 57 151767007 151769390 ACAAAGGTGAAATCCAGTG 57 NA Mus musculus 50 Ptprj ENSMUSG00000025314 ENSMUST00000111495,ENSMUST00000026352,ENSMUST00000111493 2 3 3 82 2 90298582 90299614 AATCTGTTCTGTACGGAACC 59 90298519 90298537 CACTTGAGAACCAATGCTG 59 NA Mus musculus 50 Usp33 ENSMUSG00000025437 ENSMUST00000026507 1 1 2 80 3 152036391 152036409 TACAGAAGTGTCATCTCCG 58 152036453 152037592 TATAGACACCCTATCGCAC 57 NA Mus musculus 50 Tmem47 ENSMUSG00000025666 ENSMUST00000026760 1 1 1 66 X 78329736 78329754 CTACAGACCTGTTGCTGTC 59 78339804 78339822 ATAAAGAACCAGGCTGCAG 59 NA DesignNoJunction Mus musculus 50 MGI:1918324 ENSMUSG00000025762 ENSMUST00000099121,ENSMUST00000065411 3 2 3 115 3 40839693 40839713 GGTTAGAATGTCTGTTCAGGT 59 40839790 40840622 ATATAGCTGGCCAGATTCG 58 NA Mus musculus 50 Atp5c1 ENSMUSG00000025781 ENSMUST00000026887,ENSMUST00000114896,ENSMUST00000114897 3 3 3 94 2 9985928 9990245 GTTCTTTGGCTCTGTATGAG 58 9985853 9985871 ACAAAGCCCTCTATCTGAG 58 NA Mus musculus 50 Orc2l ENSMUSG00000026037 ENSMUST00000027198,ENSMUST00000094930,ENSMUST00000114325 2 3 3 80 1 58529241 58531667 GTCAGTGTGAAATCAATCCT 57 58529180 58529198 CTGATCCAGAACACTTTGG 58 NA Mus musculus 50 Col9a1 ENSMUSG00000026147 ENSMUST00000054588,ENSMUST00000088349,ENSMUST00000115252 3 3 4 98 1 24246147 24246165 GAGAATGGTTTCCCTGGTC 59 24246227 24251207 TCCCAAGTCTCCTTTAGGT 59 NA Mus musculus 50 Plcd4 ENSMUSG00000026173 ENSMUST00000113749,ENSMUST00000113747,ENSMUST00000113748,ENSMUST00000027362 3 4 7 80 1 74611745 74611842 TATGAAACAAGGCTACCGAC 59 74611882 74611903 GTGTATACAAAGATGGAAGCTG 59 NA Mus musculus 50 Ccdc93 ENSMUSG00000026339 ENSMUST00000112620,ENSMUST00000036025,ENSMUST00000112621 2 3 4 80 1 123342250 123342268 GAGATGGGAGACTACATCC 58 123342311 123344815 TATGAAGTCATCATCCTCCG 58 NA Mus musculus 50 Ccdc19 ENSMUSG00000026546 ENSMUST00000085894,ENSMUST00000111226 3 2 2 81 1 174460071 174462218 TCAGAGAACTCATTGTTCCC 59 174462261 174462280 CATTTGATCCGCTCAAACTC 59 NA Mus musculus 50 Mcm10 ENSMUSG00000026669 ENSMUST00000102985,ENSMUST00000027980 3 2 2 81 2 4915722 4916778 TTTCTCCTGAAGAGGAGCT 59 4915659 4915678 TTCTGAAATTCCTCGGACTC 59 NA Mus musculus 50 9130404D14Rik ENSMUSG00000026796 ENSMUST00000113209 3 1 3 171 2 32777334 32777607 GATACATGGAGAAGCTATCCC 59 32777740 32778091 GCATTGTCCATTTGCTCTC 59 NA Mus musculus 50 Ptges2 ENSMUSG00000026820 ENSMUST00000028162 2 1 1 60 2 32255595 32255613 TCATTAGTGCCCTCAAGAC 58 32255931 32255949 TAAGTGATGACCTCTTCCA 57 NA DesignNoJunction Mus musculus 50 BC003993 ENSMUSG00000027014 ENSMUST00000111819,ENSMUST00000111818 2 2 5 234 2 77734629 77741882 GCTCTACCTCAGCTAAAGG 59 77734413 77734431 CTTCTGTCGTCTATGTGCT 59 NA DesignRelaxed Mus musculus 50 BC003993 ENSMUSG00000027014 ENSMUST00000065889,ENSMUST00000111821 3 2 5 120 2 77741946 77741964 GACTCAGAATCTGACAGCA 58 77734627 77741863 TACCTTTAGCTGAATGAGCC 59 NA Mus musculus 50 Eif3m ENSMUSG00000027170 ENSMUST00000028592,ENSMUST00000111110 1 2 3 81 2 104845132 104845150 TTGTGAGTGCTAAATTGGC 58 104841559 104845087 TCATGTAACAAGCCAAGTG 57 NA Nonspecific Mus musculus 50 Slc23a2 ENSMUSG00000027340 ENSMUST00000110165 1 1 2 115 2 131903221 131914842 TTTGGATGCAGAGATTACAG 57 131901377 131901395 CCACTTCTATCAGTGAGGA 57 NA Mus musculus 50 5730494N06Rik ENSMUSG00000027341 ENSMUST00000110163,ENSMUST00000110164,ENSMUST00000028816 3 3 3 235 2 132066221 132066240 TCCAGACTTTGATGACTAGC 59 132066005 132066023 TTGTCAAGTTTAGCCAGGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Mal ENSMUSG00000027375 ENSMUST00000028854,ENSMUST00000028853 3 2 2 72 2 127464345 127464366 GGCTTTACTTACAAGCATTACC 59 127460760 127460778 CGTAGATCAGAGTGACCAC 59 NA DesignNoJunction Mus musculus 50 Atp9a ENSMUSG00000027546 ENSMUST00000109177,ENSMUST00000109176,ENSMUST00000109171,ENSMUST00000029060,ENSMUST00000109175,ENSMUST00000109170 1 6 6 84 2 168463196 168464579 ATCTATCAAGGGAGCACCA 59 168463130 168463148 ATGTGAAGGAGATTGCCAC 59 NA Nonspecific Mus musculus 50 Epb4.1l1 ENSMUSG00000027624 ENSMUST00000069919,ENSMUST00000109574 2 2 12 118 2 156335033 156336479 CCTTGATGGAGAGTTCTCC 59 156336561 156336579 CTTCTTCAGCCTCTGATCG 59 NA Mus musculus 50 Polr3gl ENSMUSG00000028104 ENSMUST00000091924,ENSMUST00000029746 2 2 2 81 3 96383986 96384004 ATTATCCTTCCCAAGAGGC 58 96383819 96383941 CCTTCTTCTCTAGCGTCTC 58 NA Mus musculus 50 Astn2 ENSMUSG00000028373 ENSMUST00000030064,ENSMUST00000068214 1 2 3 85 4 65780241 65846171 ATTTGAGAAGAAAGCAGCAG 58 65780175 65780193 TGTTAGCACGGAAACTCTC 59 NA Mus musculus 50 Mpdz ENSMUSG00000028402 ENSMUST00000102830,ENSMUST00000070461 2 2 4 60 4 80959496 80963509 AACAGACCAAGGAAATCCC 59 80959454 80959473 AGCTGTACTTAGGGTAAAGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Ccdc107 ENSMUSG00000028461 ENSMUST00000030181,ENSMUST00000107922 2 2 2 148 4 43508109 43508127 AAGAAATCCTCGCAGTCAG 59 43508401 43508419 TCTAGAAGTTCCCTCTGGG 59 NA DesignNoJunction Mus musculus 50 Usp24 ENSMUSG00000028514 ENSMUST00000094933 1 1 2 80 4 106032835 106033034 ACTAGAAGGCAACATAGACC 58 106033077 106033095 AGTGACAATTTACTGCCCA 59 NA Mus musculus 50 Dnajc6 ENSMUSG00000028528 ENSMUST00000106930,ENSMUST00000038207,ENSMUST00000106933,ENSMUST00000094953 3 4 4 80 4 101296330 101296348 TCTAAACACATCCAGTGCT 58 101296392 101298307 GTACTAGAAGCATGCACTG 57 NA Mus musculus 50 Calr4 ENSMUSG00000028558 ENSMUST00000106629,ENSMUST00000106631,ENSMUST00000106628,ENSMUST00000030285 1 4 4 80 4 108918888 108923941 CTTTGGCAGGTGAAATCAG 59 108923985 108924003 ATTTCCAACCTCTTCAGCA 59 NA Mus musculus 50 2310009E04Rik ENSMUSG00000028573 ENSMUST00000107085 3 1 8 183 4 95363721 95363741 ATGATTGGACTGGAAGATCTC 59 95405598 95467256 TTTGCTGATCTAGTCCTCCT 59 NA InUTR Mus musculus 50 Pla2g2c ENSMUSG00000028750 ENSMUST00000105808,ENSMUST00000030530 2 2 2 93 4 138287531 138290186 TCTTCTACTGGACAACCTC 57 138290243 138290261 TAATAGGAGAAGAAGGCGC 58 NA Mus musculus 50 Dnajc2 ENSMUSG00000029014 ENSMUST00000115193,ENSMUST00000115195,ENSMUST00000030771,ENSMUST00000115192 3 4 4 80 5 21287188 21287207 ATCATTATGCGGTTCTTGGA 59 21282622 21287145 CCATTGCTTTATGAGCTGC 59 NA Mus musculus 50 Sorcs2 ENSMUSG00000029093 ENSMUST00000037370,ENSMUST00000070720 1 2 2 60 5 36571796 36571815 TTCTGGAAAGTTCTCTGTGG 59 36496533 36496551 AGAGTAAGCTTGGTGTAGG 58 NA DesignNoJunction Mus musculus 50 Acox3 ENSMUSG00000029098 ENSMUST00000114237,ENSMUST00000068947,ENSMUST00000114235,ENSMUST00000068563,ENSMUST00000114238 2 5 5 81 5 35932370 35932390 CTGAGTCATGGGAGTAATACC 59 35932430 35934743 GGGAATGTAAGATGAATTCCTG 58 NA Mus musculus 50 B930006L02Rik ENSMUSG00000029461 ENSMUST00000084914 2 1 3 86 7 107961501 107967257 TAGTTATGCTCCAGAGTTTCAG 59 107972673 107972691 CAGGAAGACGAGTTCTGTG 59 NA Mus musculus 50 Pxn ENSMUSG00000029528 ENSMUST00000067268 1 1 3 176 5 115995783 115995801 GATGAACTGGAGAGTTCCG 59 115996947 116001868 GGCCATGAACTTGAAATCTG 59 NA Mus musculus 50 Osbpl3 ENSMUSG00000029822 ENSMUST00000114470,ENSMUST00000114469,ENSMUST00000071728,ENSMUST00000114468 1 4 4 80 6 50301891 50301910 TGATGTCTGTGAAGAAGTCG 59 50298125 50301849 CTTCTGACTTCACCTTCAGG 59 NA Nonspecific Mus musculus 50 Ercc2 ENSMUSG00000030400 ENSMUST00000062831 2 1 2 100 7 19969349 19969367 CCTGATTGTGGCCTATCAG 59 19969505 19969666 GAAGCTCTTCTATGACCTTCTC 59 NA Mus musculus 50 Sez6l2 ENSMUSG00000030683 ENSMUST00000106335,ENSMUST00000032921,ENSMUST00000106333,ENSMUST00000106332 3 4 4 104 7 134101873 134101891 ACTGTGACTCAGGATACCA 59 134101959 134102569 CACAAGATGCTGTACAGCT 59 NA Mus musculus 50 Myh14 ENSMUSG00000030739 ENSMUST00000048102,ENSMUST00000107900 2 2 3 184 7 51911053 51912803 TCAGCACCATGTCTTATGG 59 51909414 51910599 CTCCAACAGATAGGTCTCG 58 NA Mus musculus 50 9030624J02Rik ENSMUSG00000030982 ENSMUST00000059390,ENSMUST00000033287 1 2 4 82 7 125903690 125903710 TCAGACACGAGTGTTATTCAG 59 125903754 125909891 TAGACCAGCTTTCCAAACG 59 NA Nonspecific Mus musculus 50 Rbm10 ENSMUSG00000031060 ENSMUST00000115375,ENSMUST00000115374,ENSMUST00000115376,ENSMUST00000084383 3 4 4 80 X 20227328 20227346 AAGTATGGTATCCCTGAGC 58 20227390 20227485 TTGTTCAAAGTCCACAGAG 57 NA Nonspecific Mus musculus 50 Igsf1 ENSMUSG00000031111 ENSMUST00000114893,ENSMUST00000088847,ENSMUST00000033442 2 3 5 86 X 47139223 47139242 GAGGAAACTATAGCTGTCGT 58 47138428 47139175 GGTAGAATTCTGTCACAACG 58 NA Mus musculus 50 Cacna1f ENSMUSG00000031142 ENSMUST00000070906 3 1 4 124 X 7195888 7196105 CAAAGTATTGGACCTGAATTGG 59 7196189 7196208 TATGTGAATGCAGGTGACTC 59 NA Mus musculus 50 Otud5 ENSMUSG00000031154 ENSMUST00000115667 2 1 5 81 X 7444900 7444919 TATGGCAGAGATGTACAACC 59 7444961 7445065 GAATGTGTTGATAGGTTCCAC 58 NA Mus musculus 50 F8 ENSMUSG00000031196 ENSMUST00000033539 1 1 2 80 X 72456761 72456779 TGTTTGCTACTTGGTCTCC 59 72455870 72456717 GATCATTCACCTGAGGTCG 59 NA Mus musculus 50 Brcc3 ENSMUSG00000031201 ENSMUST00000033544,ENSMUST00000114075,ENSMUST00000114074,ENSMUST00000116565 2 4 4 84 X 72668168 72668187 TTCTGACAAGAGAAAGGACC 59 72668233 72680818 TAGTTCAGCCAACCTTTCTG 59 NA Mus musculus 50 2610029G23Rik ENSMUSG00000031226 ENSMUST00000033577 2 1 1 76 X 102276713 102276732 GATATTGAAATGGCTTGGGC 59 102277277 102277296 GGGTCAACTGATGAAATCAG 58 NA DesignNoJunction Mus musculus 50 Nsbp1 ENSMUSG00000031245 ENSMUST00000033597 3 1 1 288 X 106203501 106203520 GAGAAGCCAAGATTATGGAG 57 106201142 106201160 TCATCTTTGGACACCTCTG 58 NA DesignNoJunction Mus musculus 50 Cstf2 ENSMUSG00000031256 ENSMUST00000113287,ENSMUST00000113286,ENSMUST00000033609,ENSMUST00000113283,ENSMUST00000113281 2 5 6 89 X 130595190 130595209 CATCCCTTATGAAGCTACTG 57 130595259 130595501 TCCCTATCGTATACCAATCTG 58 NA Mus musculus 50 Lrch2 ENSMUSG00000031290 ENSMUST00000035921 1 1 3 94 X 143916205 143922784 ATGAGGAGGAATATGACCG 58 143915411 143915430 GTATTCTTGACGAGATGCAC 58 NA Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112408,ENSMUST00000112406 3 2 10 120 X 156876222 156876241 TCATTCTCGTTACATCCCTG 59 156896812 156899290 ACTTCTGAAGCAGCATCTG 59 NA Mus musculus 50 Arhgap4 ENSMUSG00000031389 ENSMUST00000114408,ENSMUST00000114398,ENSMUST00000064376,ENSMUST00000114404 1 4 7 97 X 71151774 71151792 AGATGTGGGACGTATTGTC 59 71151193 71151504 TCTTCTTGGTTGTCTGGAG 58 NA Mus musculus 50 Arhgef7 ENSMUSG00000031511 ENSMUST00000033908,ENSMUST00000110909,ENSMUST00000110914,ENSMUST00000110911,ENSMUST00000110910 3 5 7 194 8 11728405 11758437 ACCATCGAGAAAGTCTACC 58 11781232 11782535 TAGTCCAATGTCTGCTGTC 58 NA Mus musculus 50 Slc7a2 ENSMUSG00000031596 ENSMUST00000057784 1 1 2 80 8 41991070 41993760 CTTATCAACAAGTCTTCTGGG 58 41993802 41993820 CTAAACAGTAAGCCATCCC 57 NA Mus musculus 50 Ap1g1 ENSMUSG00000031731 ENSMUST00000034171 3 1 2 84 8 112353563 112356623 ACATTTCAGAAAGCTTGTGC 59 112356670 112356688 AGAGACATCATGTTCTGGG 58 NA Mus musculus 50 Cntnap4 ENSMUSG00000031772 ENSMUST00000034225,ENSMUST00000079307 1 2 2 80 8 115382182 115383015 TCTTCGTGGAGATTGATGAG 59 115383057 115383076 CCAAAGATTTGACTGCACTG 59 NA Mus musculus 50 Cog8 ENSMUSG00000031916 ENSMUST00000034391,ENSMUST00000095517 3 2 2 92 8 109573021 109574051 CAGACTTTAGGCATTTCACC 58 109572948 109572966 AATAAAGGCGAGAGGTTCC 59 NA Mus musculus 50 Birc3 ENSMUSG00000032000 ENSMUST00000013949,ENSMUST00000115674,ENSMUST00000115673,ENSMUST00000115672 2 4 4 83 9 7860511 7860530 CTCTAACTGGCCTTCTAGTG 59 7860347 7860465 ACATCATCACTGTGTCCTG 59 NA Mus musculus 50 Mcam ENSMUSG00000032135 ENSMUST00000034650,ENSMUST00000098852 2 2 2 96 9 43945381 43946929 GGAGAACCGAGTTCATATCC 59 43946988 43947006 GTCTTCCTTAACTAGGCGT 58 NA Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113685,ENSMUST00000050905,ENSMUST00000113684,ENSMUST00000030185 2 4 16 83 9 66877542 66878847 ATGACTTAGAAGACGAGCTG 59 66877478 66877496 TCATATCGTTGAGAGCGTG 59 NA Mus musculus 50 Eml4 ENSMUSG00000032624 ENSMUST00000096766,ENSMUST00000086525 2 2 4 183 17 83827349 83827557 TGTCATCGTCAATCAAGCA 59 83839485 83840645 ATAACCGTATACCCACTCCA 59 NA Mus musculus 50 Gab3 ENSMUSG00000032750 ENSMUST00000114110,ENSMUST00000037374,ENSMUST00000114104 3 3 4 80 X 72271539 72278522 GAAGATGGTGCAGATTCCA 59 72271477 72271496 AGTATGAAGTGAACTGGCAG 59 NA Mus musculus 50 Gmppa ENSMUSG00000033021 ENSMUST00000037796,ENSMUST00000113584,ENSMUST00000094822,ENSMUST00000116580 3 4 4 82 1 75438339 75438357 CGATACCAGATCACTCACC 59 75438400 75438578 GGATGGATGTAAACATTTCCTC 59 NA Mus musculus 50 Snap91 ENSMUSG00000033419 ENSMUST00000074468,ENSMUST00000036347 2 2 4 80 9 86704373 86710266 AATGAAGGATCTGGTGCTC 59 86701369 86701388 AGCTGGTGTAGAATTAGGAG 58 NA Mus musculus 50 Rbm9 ENSMUSG00000033565 ENSMUST00000109780 3 1 5 89 15 76933359 76944042 GCTCCAAGGTGAATAATGC 58 76929902 76929921 CTACTGGGCTTAACTTCCAG 59 NA Mus musculus 50 Bai3 ENSMUSG00000033569 ENSMUST00000115223,ENSMUST00000115225,ENSMUST00000041838 1 3 4 88 1 25477461 25477479 TCATCGTGGTCACAATCAG 59 25453313 25477409 ATTCAAAGTGCCATTTGCC 59 NA Mus musculus 50 Egr3 ENSMUSG00000033730 ENSMUST00000035908 1 1 1 60 14 70478754 70478773 CTTATTCGAGCTCTTTCCAG 58 70478795 70478814 AACTTTCCCAAGTAGGTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem87a ENSMUSG00000033808 ENSMUST00000090046,ENSMUST00000090042,ENSMUST00000043847,ENSMUST00000110729 1 4 4 80 2 120197304 120197324 GAGGAACATTGTAAAGCTCTC 58 120196222 120197262 ATGAACACAATAGACGCTG 57 NA Mus musculus 50 BC030867 ENSMUSG00000034773 ENSMUST00000100392,ENSMUST00000036548 1 2 2 80 11 102119220 102119238 AGGAGATCATGGTTTCCAC 58 102119282 102120649 GGGAACTGGTAGCAATCTC 59 NA Mus musculus 50 C8a ENSMUSG00000035031 ENSMUST00000048947,ENSMUST00000064873,ENSMUST00000106808 2 3 3 80 4 104499318 104499338 GTGCCATTACATATCAGTCCT 59 104494801 104499276 GGTAGATAGGCTGCATCTC 58 NA Mus musculus 50 Plekhh3 ENSMUSG00000035172 ENSMUST00000043397 3 1 2 82 11 101026100 101026378 ACCAGGTTTGAGAATTTGAC 58 101026037 101026055 TGAAGACGAAGACACAGTC 59 NA Mus musculus 50 1500031L02Rik ENSMUSG00000035790 ENSMUST00000115168,ENSMUST00000042869 1 2 2 148 16 32104125 32107001 AGTTCTCAGATTGCACCAG 59 32107113 32107131 CATTGTTTCTGCCAAGCTC 59 NA Mus musculus 50 Palm ENSMUSG00000035863 ENSMUST00000105379 1 1 2 90 10 79277974 79281791 ATGATGAAAGCAGTGGTCC 59 79281845 79281863 TGTGAATGAGTTCGTCCAC 59 NA Mus musculus 50 6330500D04Rik ENSMUSG00000036006 ENSMUST00000110383,ENSMUST00000110384 2 2 5 80 13 24798131 24801997 ACTGAGAAGAGTGGTTACAG 58 24802040 24802058 TACACCTGTGTCTTCAGTC 58 NA Mus musculus 50 Fmnl2 ENSMUSG00000036053 ENSMUST00000050719 2 1 3 87 2 52986000 52987760 CATTATCACAGTGCTGAAGAC 59 52987809 52987827 TTCAGTGAGAACAGGTTCG 59 NA Mus musculus 50 Qsox2 ENSMUSG00000036327 ENSMUST00000091263,ENSMUST00000116561,ENSMUST00000036187 1 3 3 80 2 26077793 26077812 GACACTTGGCATTACTTCAG 58 26076555 26077750 GGCTTTGCAACATTAACCA 59 NA Mus musculus 50 Zfp280c ENSMUSG00000036916 ENSMUST00000072292,ENSMUST00000088898,ENSMUST00000076635 3 3 4 92 X 45896822 45896841 CGATACTTCTGGCTTAGACC 59 45896606 45896768 GCTCTTTCGGTAACATTCTC 58 NA Mus musculus 50 Depdc5 ENSMUSG00000037426 ENSMUST00000046788,ENSMUST00000087897,ENSMUST00000114460,ENSMUST00000049780 3 4 4 80 5 33285934 33285952 GGCAGAACTTTCCATAAGG 58 33285994 33286635 AGATTCATAAGGGTACTTGGG 58 NA Mus musculus 50 Bclaf1 ENSMUSG00000037608 ENSMUST00000100045 3 1 3 83 10 20041914 20042784 GAGATACAGGTCTCGTTCC 58 20042828 20042849 CTGTAATCTCGACGATAATCTC 57 NA Mus musculus 50 Fgd3 ENSMUSG00000037946 ENSMUST00000110087,ENSMUST00000048716 3 2 3 82 13 49363653 49363671 GTGTAAGAGCTGTGGTGAG 59 49362088 49363607 TCCTACAGATGACCTCTCC 59 NA Mus musculus 50 Parp11 ENSMUSG00000037997 ENSMUST00000112195,ENSMUST00000112193,ENSMUST00000039680 2 3 4 108 6 127421588 127421609 CAGTTAGCAGTGAAGATATCGA 59 127421677 127424263 TGCTTCATTTCTGCAAAGTC 59 NA Mus musculus 50 Atp13a4 ENSMUSG00000038094 ENSMUST00000039090 1 1 2 166 16 29422686 29422704 AAGAGAAGAAACCTGGTCC 58 29421025 29421753 GTTCATAACTAGCTTTGGCA 58 NA Mus musculus 50 Gabpb2 ENSMUSG00000038766 ENSMUST00000107209,ENSMUST00000098873,ENSMUST00000070774 3 3 5 80 3 94994526 94994544 ATCCAAACATCACTCCCTG 59 94993196 94994483 CACAGTTAGAACTTGCTGTC 58 NA Mus musculus 50 AW146299 ENSMUSG00000038770 ENSMUST00000110672,ENSMUST00000116454,ENSMUST00000085681 2 3 5 115 5 145762085 145765810 AATATCGCTGGAGACTGTG 59 145758098 145758118 GAGATGTTCCGAAGAAATGTG 59 NA Mus musculus 50 Tasp1 ENSMUSG00000039033 ENSMUST00000110079,ENSMUST00000046656 1 2 3 80 2 139736374 139772905 GTGAGTACCTCAGGATGTG 59 139736312 139736330 ATCTTCAGCTTGTAAAGCG 58 NA Mus musculus 50 Tasp1 ENSMUSG00000039033 ENSMUST00000110079,ENSMUST00000046656 3 2 3 81 2 139736374 139772905 GTGAGTACCTCAGGATGTG 59 139736311 139736330 CATCTTCAGCTTGTAAAGCG 59 NA Mus musculus 50 BC017643 ENSMUSG00000039294 ENSMUST00000106115,ENSMUST00000038709 2 2 2 80 11 121088151 121088572 GCCTATTACAGTGGAGATAGTC 59 121088092 121088110 TTCCAAGTTCTGTACAGCC 59 NA Mus musculus 50 Ypel5 ENSMUSG00000039770 ENSMUST00000045174 3 1 1 80 17 73195733 73195751 ATCTCTACTCGGTTCACAG 58 73197930 73197949 TTGAACTTCACTGTACTGCA 59 NA DesignNoJunction Mus musculus 50 Bach2 ENSMUSG00000040270 ENSMUST00000108179 2 1 4 196 4 32649583 32649601 ATCTCAGCAACCCTTAGTC 58 32649761 32650148 AAGAGGAGAACTCACAGAG 57 NA Mus musculus 50 Apobec1 ENSMUSG00000040613 ENSMUST00000112586,ENSMUST00000112587,ENSMUST00000112585 2 3 3 86 6 122531756 122538170 ACTCTGAGGAGAAGAATTGAG 58 122531690 122531708 CTCATACAGCAGACAGGTC 59 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000111376,ENSMUST00000111383 2 2 17 81 2 90998621 90998639 GATCAAGACTCTGTCATCG 57 90998285 90998578 CGGAACTATTACTCACTTCAG 57 NA Mus musculus 50 Slc25a34 ENSMUSG00000040740 ENSMUST00000038661 3 1 1 125 4 141178169 141178187 GTCACAGTAGGTTCAGCTG 59 141177371 141177390 TATACTGCTGATCATGCCAC 59 NA DesignNoJunction Mus musculus 50 S100pbp ENSMUSG00000040928 ENSMUST00000106059,ENSMUST00000072431,ENSMUST00000106061 3 3 4 80 4 128857510 128858999 GTTCATCAAACAGACATGCC 59 128857449 128857467 GAACAGGAATGACTTTGCC 59 NA Mus musculus 50 Mbp ENSMUSG00000041607 ENSMUST00000062446,ENSMUST00000114674,ENSMUST00000114673,ENSMUST00000080658 2 4 10 102 18 82731238 82742225 CATGTACAAGGACTCACAC 57 82742291 82742309 GAAGAAATGGACTACTGGG 57 NA Mus musculus 50 2700046A07Rik ENSMUSG00000041789 ENSMUST00000067450,ENSMUST00000048109 2 2 2 70 18 62915611 62915629 TTCAAAGAACTACGCTCCA 58 62914810 62914828 GTCTTCTGTGAGCCTAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Abca8a ENSMUSG00000041828 ENSMUST00000100287,ENSMUST00000046223,ENSMUST00000106662,ENSMUST00000106664 2 4 4 99 11 109947845 109947865 CATATTCACCAACGCTTACTC 59 109945566 109947784 GGAATGACAATGAGCTGTG 58 NA Mus musculus 50 Gprasp1 ENSMUSG00000043384 ENSMUST00000113147,ENSMUST00000113145 2 2 5 106 X 132286539 132332092 GTTCAACCATTTGAACAGC 57 132332162 132332338 CTTAAAGCAGGGCAATCTC 58 NA InUTR Mus musculus 50 Usp48 ENSMUSG00000043411 ENSMUST00000105840,ENSMUST00000105841,ENSMUST00000105839 2 3 10 81 4 137169704 137169723 TACAAGTTCAATGACGAGGA 58 137169766 137171636 AAGGTTCTGCTAGATCTTCC 58 NA Mus musculus 50 4933402P03Rik ENSMUSG00000044084 ENSMUST00000056941 1 1 1 104 11 69631770 69631788 AACATCAGCATCAATGTGG 58 69631424 69631443 GGTAACCTGGACTACTTCTG 59 NA DesignNoJunction Mus musculus 50 Uqcrq ENSMUSG00000044894 ENSMUST00000109019 2 1 3 96 11 53242651 53243648 TGGTGAAGATTATGTTAGCG 57 53242574 53242592 TACATGGCTGGATTCTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lcn6 ENSMUSG00000045684 ENSMUST00000114199,ENSMUST00000114198,ENSMUST00000114197 2 3 4 139 2 25536308 25536326 TGAGGTCTTCAACACAGTG 59 25536548 25536779 CACAAGTGAGGTCCTTCTG 59 NA Mus musculus 50 Serinc4 ENSMUSG00000046110 ENSMUST00000056312,ENSMUST00000067823 1 2 3 80 2 121279332 121279453 CAGAGACAATAACCTTTCAAGG 58 121279273 121279292 TATCCGGTATTTGTGGTTCC 59 NA Mus musculus 50 C2cd3 ENSMUSG00000047248 ENSMUST00000051777,ENSMUST00000098259 3 2 2 80 7 107523030 107528484 CTCGTATCTGACAGATATGGC 59 107528526 107528544 ATCTGAACTCTGCCAACAG 59 NA Mus musculus 50 Dynlrb1 ENSMUSG00000047459 ENSMUST00000109682,ENSMUST00000054912 1 2 2 80 2 155068475 155068493 GGAGGAAACACTCAAGAGG 59 155068537 155073519 TTGATGGGAATGCCTTCTG 59 NA Mus musculus 50 9130023D20Rik ENSMUSG00000047789 ENSMUST00000052514 2 1 1 80 13 113491849 113493753 TAATATCCTGGGAACGGTG 58 113493797 113493815 TCCAGATGGAATCCTAAGC 58 NA Mus musculus 50 EG434280 ENSMUSG00000047935 ENSMUST00000080795 1 1 1 87 8 12432411 12434745 TAAACATCCAAGAGGGTGC 59 12434794 12434814 AGCAACTCTACATCTAGTGTG 59 NA InUTR Mus musculus 50 Efcab4a ENSMUSG00000048200 ENSMUST00000053670 1 1 1 104 7 148651575 148651673 AAACCCAAAGAGATGTGGT 59 148651949 148651967 CTCGAAGCCTCAGATTCAG 59 NA Mus musculus 50 Sp8 ENSMUSG00000048562 ENSMUST00000095338,ENSMUST00000063918 1 2 2 62 12 120086900 120086918 TGTAATAAGATCGGCAGCC 59 120086944 120086962 GAAGGAAGAAGAGCTGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4933407P14Rik ENSMUSG00000049506 ENSMUST00000107000,ENSMUST00000059448 3 2 2 61 11 104048877 104048898 CTTCTTTGTCTTTATCACTCCC 58 104048919 104048938 CCACTTCTACCATAATGCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 4921525H12Rik ENSMUSG00000049565 ENSMUST00000062935,ENSMUST00000094007,ENSMUST00000106606 3 3 3 80 3 108555536 108555555 GGAAATTTCCTGAACCTTCG 59 108559404 108559667 GTTCAAGTCCTGTGAGAGG 59 NA Mus musculus 50 D130029J02Rik ENSMUSG00000050357 ENSMUST00000093200,ENSMUST00000062574 2 2 2 92 8 108219667 108220771 GGAAGCAAAGTAAAGACGG 58 108220953 108220971 ACTTGATTGAGATGGGAGG 58 NA Mus musculus 50 Amigo1 ENSMUSG00000050947 ENSMUST00000106661,ENSMUST00000050909,ENSMUST00000106656 1 3 4 60 3 107991211 107991229 CAACACAGCCTACACTACC 59 107991252 107991271 GTATATGAGGACCAGAACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 A630018P17Rik ENSMUSG00000051224 ENSMUST00000112188,ENSMUST00000055455,ENSMUST00000112187 2 3 3 73 X 162943662 162943681 GACATTGCGTAACAGAAGAG 58 162941308 162941327 TGATTTGGTTCTTGTCAGAC 58 NA DesignNoJunction, InUTR Mus musculus 50 Pard3b ENSMUSG00000052062 ENSMUST00000075374,ENSMUST00000094906,ENSMUST00000046673 1 3 5 83 1 61814550 61814571 ACTTAGAATACACAGATGGAGG 59 61814612 62056890 CAGCAATCAGCTTATCTTTGTC 59 NA Mus musculus 50 Atf7 ENSMUSG00000052414 ENSMUST00000064254,ENSMUST00000108828 1 2 2 80 15 102384266 102384284 AGTGGAAGTAGACTCATCG 58 102381982 102384222 GTGGTAACTTCCTTCTCCT 58 NA Mus musculus 50 Ptprt ENSMUSG00000053141 ENSMUST00000109445,ENSMUST00000109442,ENSMUST00000109441,ENSMUST00000073084 3 4 6 141 2 161523814 161523835 TCAGAATTCTAACACTGTGGAG 59 161482011 161523712 CTTCTTAGCCAGCTTCCTC 59 NA Mus musculus 50 Tmem39b ENSMUSG00000053730 ENSMUST00000066336,ENSMUST00000102588 1 2 2 111 4 129370388 129370406 CTTCTGTCAGCTCATAGCC 59 129369746 129370313 GATCAGGTGGAAGTTCAGG 59 NA Mus musculus 50 Spock3 ENSMUSG00000054162 ENSMUST00000110270 1 1 2 179 8 65430784 65592356 ACGATGATTATTTCCGCAC 58 65622806 65699453 CTCCTACTTCTTTCATACTGTG 57 NA Mus musculus 50 Tprkb ENSMUSG00000054226 ENSMUST00000113753,ENSMUST00000113752,ENSMUST00000067137,ENSMUST00000089570 3 4 4 156 6 85874509 85877245 CCAATGTGATTGTCGATCC 58 85877808 85877827 CCAAATTTCTTCAAGGCCTC 59 NA Mus musculus 50 Cadps ENSMUSG00000054423 ENSMUST00000067491,ENSMUST00000112658,ENSMUST00000112657 3 3 3 84 14 13298430 13298448 ATGTGGATCTGATGGAGTC 58 13290335 13298383 GTTAAACTCTTGACTGGCTC 58 NA Mus musculus 50 Smyd1 ENSMUSG00000055027 ENSMUST00000114190,ENSMUST00000074301,ENSMUST00000114188 3 3 6 86 6 71185369 71187363 TCAACAATGGCAATCATGAG 58 71175481 71175499 CTTCTGAGATCTTGCCCAG 59 NA Mus musculus 50 Tmem69 ENSMUSG00000055900 ENSMUST00000106477,ENSMUST00000106478,ENSMUST00000069674 3 3 3 88 4 116226330 116227386 GAGCATCTTCAAAGATGCT 57 116226260 116226279 CAGTAGACATGTCTTGAGAG 57 NA Mus musculus 50 H2-T9 ENSMUSG00000056116 ENSMUST00000077960,ENSMUST00000058801,ENSMUST00000080015 2 3 3 104 17 36176122 36176140 GACTGTTGTGGATGATGAG 57 36175706 36175932 AGTAAAGACTCGCCAACTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Chst3 ENSMUSG00000057337 ENSMUST00000068690 1 1 1 60 10 59650899 59650918 GTACACAGCCTAAAGATTCG 58 59650858 59650877 AAACTATGACCACAAATGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1446 ENSMUSG00000057817 ENSMUST00000112929,ENSMUST00000081236 3 2 2 61 19 12964544 12964562 CTTCTGCAAGTCCAATGTG 59 12964501 12964519 TGAGAGCCATTATTGCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr111 ENSMUSG00000057899 ENSMUST00000113614,ENSMUST00000077782 1 2 2 80 17 42848360 42850025 AGATGCAGAGTTACAGTGC 59 42848298 42848317 TTCTGTCTTGGATGAAGGTC 59 NA Mus musculus 50 Lin9 ENSMUSG00000058729 ENSMUST00000085803,ENSMUST00000085804 1 2 2 82 1 182582090 182589204 TCCCACAGAAATTTACAGC 57 182589250 182589268 GAGTAGGTTCCGTAATCGA 58 NA Mus musculus 50 Ifitm6 ENSMUSG00000059108 ENSMUST00000081924 3 1 1 60 7 148202650 148202671 CTGGTCTACATTTAACACAGTG 59 148202611 148202629 GATGTAGGCAATGAAACCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr105 ENSMUSG00000060137 ENSMUST00000113642,ENSMUST00000073218 3 2 2 60 17 37519971 37519991 TTCACTCCATAATGACGTCTC 59 37520013 37520031 AAGAAATGATGGATGCGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sphk1 ENSMUSG00000061878 ENSMUST00000106388,ENSMUST00000106387,ENSMUST00000100201,ENSMUST00000106386,ENSMUST00000063396,ENSMUST00000063446,ENSMUST00000100200 1 7 8 108 11 116396301 116396397 AACTGATACTCACCGAACG 59 116396469 116396487 TCATGCATCAGACCATCAC 59 NA Mus musculus 50 Dnahc12 ENSMUSG00000064221 ENSMUST00000073309 2 1 1 75 14 27585847 27585867 GCTAGACTATCTAGCAATGGG 59 27586144 27586162 GAACTCATCAAAGCAAGCC 59 NA DesignNoJunction Mus musculus 50 Akap13 ENSMUSG00000066406 ENSMUST00000098366,ENSMUST00000026851 3 2 4 99 7 82822280 82822298 TCCATGCGTTCTCTTTCTC 59 82822361 82830016 CTTCCAGACTGAAACTCCG 59 NA Mus musculus 50 Wfdc13 ENSMUSG00000067704 ENSMUST00000088260 3 1 1 81 2 164510786 164510805 GTCCCAAGCAATACTTTCTG 58 164512375 164512393 GTACAGAACATGTTGCACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tnfrsf13c ENSMUSG00000068105 ENSMUST00000089161,ENSMUST00000109534 3 2 3 248 15 82054346 82054609 ACACTGGACATACAAGCAG 59 82053674 82053692 CTGAGGAGGGTACAAAGAC 58 NA DesignNoJunction Mus musculus 50 Ptprz1 ENSMUSG00000068748 ENSMUST00000090568 1 1 2 80 6 22975032 22977843 ATCGTAGCCTATGATCATAGC 59 22977883 22977903 GGCATTGATGTAATCAGTCAG 59 NA Mus musculus 50 OTTMUSG00000009332 ENSMUSG00000070737 ENSMUST00000106097,ENSMUST00000094712 2 2 2 61 4 126805213 126805231 AGTAACGTGCTCTTGATCC 59 126806110 126806128 TCTTTCAGAACCACCAGAG 58 NA DesignNoJunction Mus musculus 50 Armc2 ENSMUSG00000071324 ENSMUST00000105503,ENSMUST00000095729 1 2 2 80 10 41644265 41644286 ATCAACAATCTGTCCTTCTACC 59 41643657 41644224 CCTTAAGAGCAGTTCAGCA 59 NA Mus musculus 50 MGI:1919424 ENSMUSG00000073126 ENSMUST00000110824,ENSMUST00000035694 2 2 3 68 12 33833334 33833352 AAAGCAGGGAGGTTATGAG 58 33902593 33902612 CATCATGTGCTGGATAATGG 58 NA DesignNoJunction Mus musculus 50 Pramel4 ENSMUSG00000073724 ENSMUST00000105759,ENSMUST00000084191 1 2 6 88 4 143656669 143656688 TATTATTGGGCCAAGCAGAG 59 143656738 143656802 AATTCCTGGATTGAGGAGTG 59 NA Nonspecific Mus musculus 50 Ggh ENSMUSG00000073987 ENSMUST00000029904,ENSMUST00000098242 2 2 2 84 4 19973389 19973408 TGGGAAACTACTACATTGCT 58 19973455 19976950 CTAAGATCGGGCCTTATGG 59 NA Mus musculus 50 Foxl2os ENSMUSG00000074122 ENSMUST00000098459 3 1 1 63 9 98853244 98853262 AGAGCTAAGAAGACTGGGA 59 98853199 98853217 CTCTATCCACCTACTGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cpne1 ENSMUSG00000074643 ENSMUST00000109608,ENSMUST00000109607 3 2 2 81 2 155899394 155899549 CGACGATTTCAGAATGCTC 58 155899331 155899351 TGAAGTAGGAAACCATCTGAG 59 NA Mus musculus 50 1700041B20Rik ENSMUSG00000074825 ENSMUST00000099409 3 1 2 271 2 126967462 126967727 GGATACATCCAGTGACCAG 59 126967209 126967227 ATAAACATAGTGCCCTGGG 59 NA DesignNoJunction, InUTR Mus musculus 50 IGKV13-84 ENSMUSG00000076538 ENSMUST00000103339 1 1 1 60 6 68889619 68889637 GCTCTTACTGCTGTTTGGA 59 68889779 68889798 TGAAGATTGTGTCATCTGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 NM_001010930.1 ENSMUSG00000078525 ENSMUST00000105882 1 1 1 60 7 61667759 61667778 GGTCTACTGACTCAAAGTCC 59 61667602 61667621 GTTGCTCATCCTTAAAGTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Vps25 ENSMUSG00000078656 ENSMUST00000107280,ENSMUST00000042477 2 2 4 83 11 101118260 101120234 GGATGAAGAGTTCCATGGG 59 101120280 101120299 ATAATCTCAGCCTTGTGCTC 59 NA Mus musculus 50 Etohi1 ENSMUSG00000078882 ENSMUST00000108996 3 1 4 80 2 176222972 176224143 CATGGAAGGCATGAAAGAC 58 176222910 176222928 ACTCTGATATGCAAAGGCT 58 NA Nonspecific Mus musculus 50 Etohi1 ENSMUSG00000078898 ENSMUST00000109047 1 1 3 80 2 175206334 175207505 CATGGAAGGCATGAAAGAC 58 175207549 175207567 ACTCTGATATGCAAAGGCT 58 NA Nonspecific Mus musculus 50 A2APR4_MOUSE ENSMUSG00000079326 ENSMUST00000112339 1 1 1 60 X 157738854 157738874 TGGTTCTGATATTGAGGACAC 59 157738895 157738914 TTCAAGTTCAGAGTCTACGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-486 ENSMUSG00000070084 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 IGHD4-1 ENSMUSG00000076622 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 A2A4S0_MOUSE ENSMUSG00000078279 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Wnt9a ENSMUSG00000000126 ENSMUST00000000128,ENSMUST00000108783 1 2 2 90 11 59142210 59142228 TCTAGCAAGGATTTGCGAG 59 59144410 59144428 ATTTGCAAGTGGTTTCCAC 59 NA DesignNoJunction Mus musculus 50 Snapin ENSMUSG00000001018 ENSMUST00000107352 3 1 2 155 3 90294190 90294208 TTTCCTCTTCCCAGAACTG 58 90293493 90293511 TGGTTTAACCGCCTTAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Col6a1 ENSMUSG00000001119 ENSMUST00000001147 1 1 1 80 10 76173873 76174036 GACATTCAGGTAGTTTCTGTG 58 76173813 76173831 GCAGGAAATGACATTGAGC 59 NA Nonspecific Mus musculus 50 Tcirg1 ENSMUSG00000001750 ENSMUST00000001801 1 1 1 85 19 3896847 3896865 CATCCACCTTGGAGAACAG 59 3896707 3896799 CTCAGAAGGGACAAACTCAG 59 NA Mus musculus 50 Grik3 ENSMUSG00000001985 ENSMUST00000030676 1 1 1 80 4 125347989 125363244 CTCATTGACCACAAAGCAG 59 125363287 125363306 TTTAGAGAAGTCAATGGCCT 58 NA Mus musculus 50 Rhoc ENSMUSG00000002233 ENSMUST00000106787,ENSMUST00000002303 3 2 2 115 3 104594901 104594919 GTTTCCAGAGGTCTACGTG 59 104595510 104595528 GATCGTAGTCTTCTTGCCC 59 NA DesignNoJunction Mus musculus 50 Irf3 ENSMUSG00000003184 ENSMUST00000107835,ENSMUST00000003284,ENSMUST00000107834 2 3 3 87 7 52257083 52257101 CTACACTCTGTGGTTCTGC 59 52257152 52257545 TGTAGGAACAACCTTGACC 59 NA Mus musculus 50 Hnrnpa2b1 ENSMUSG00000004980 ENSMUST00000114459,ENSMUST00000069949,ENSMUST00000116609,ENSMUST00000090002 3 4 4 180 6 51416368 51416388 CCATAAATGGTCACAATGCAG 59 51415228 51416147 CTTCCGTATCCATCAGATCC 59 NA Mus musculus 50 Polr2a ENSMUSG00000005198 ENSMUST00000058470,ENSMUST00000071213 2 2 2 81 11 69557138 69557158 GCAGATTCAAAGACTTACCAG 58 69556944 69557095 GAGCCTTCTCAATGACCTC 59 NA Mus musculus 50 Slc1a6 ENSMUSG00000005357 ENSMUST00000005490 3 1 1 103 10 78254020 78254038 ATCATACATCCTGGGAAGG 58 78254104 78256043 AACATATTTCTGACCAGGTC 57 NA Mus musculus 50 Fcer2a ENSMUSG00000005540 ENSMUST00000005678,ENSMUST00000111036,ENSMUST00000074396,ENSMUST00000044741,ENSMUST00000111034 2 5 5 84 8 3683436 3683575 AAAGGAACAGGACTTCCTG 59 3683370 3683390 AAACTCTCCCTCCATATTGAG 58 NA Mus musculus 50 Fnbp4 ENSMUSG00000008200 ENSMUST00000013759 1 1 1 80 2 90591705 90591723 CGCATCAAATGGATCAGAC 58 90591767 90592985 TCAATTTCAACTCCTGCCA 59 NA Mus musculus 50 Relt ENSMUSG00000008318 ENSMUST00000008462 1 1 1 80 7 107997009 107997324 CAGAGAAGAAAGAGAATGCAG 58 107996949 107996967 TGTGACTTGTCTGTACCAG 58 NA Mus musculus 50 6330409D20Rik ENSMUSG00000009551 ENSMUST00000009695 3 1 1 81 2 32593066 32593084 GCCTACCTTCACATAGTCC 59 32588543 32593022 TTCCTGAAGGTGAAGTTCTC 59 NA Mus musculus 50 1110031B06Rik ENSMUSG00000009894 ENSMUST00000116373,ENSMUST00000010038,ENSMUST00000068575 2 3 3 141 11 59251590 59251609 TAGGACTGATGGCAAATTCC 59 59242304 59251486 TCTGTCAGCAATCTGTCAG 59 NA Mus musculus 50 Cd48 ENSMUSG00000015355 ENSMUST00000068584 1 1 2 80 1 173626082 173629518 ACCCTGGAAGTATTTGATCC 59 173629561 173629579 CAGGTGACAGGAATCAGTC 59 NA Mus musculus 50 Gzmb ENSMUSG00000015437 ENSMUST00000015581 3 1 1 96 14 56879481 56879499 CAGCAAGTCATCCCTATGG 59 56879267 56879423 CCTTACTCTTCAGCTTTAGCA 59 NA Mus musculus 50 Rnf5 ENSMUSG00000015478 ENSMUST00000015622 2 1 1 155 17 34740469 34740489 CCCTGTGTTAGTGTATATGTG 57 34740334 34740352 TATTACATTCGAAGGTCGC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Gata5 ENSMUSG00000015627 ENSMUST00000108890 3 1 2 107 2 180067159 180068531 GTACCTGACTTCTTGGAGG 58 180067070 180067088 GCATAGATAGTGTCCGGTG 59 NA DesignNoJunction Mus musculus 50 Cd46 ENSMUSG00000016493 ENSMUST00000016637,ENSMUST00000110814 1 2 2 100 1 196911593 196911612 TTACAAGACCCTTCATTTGG 57 196909816 196911532 CCAACTACGTAATAACCTTCC 58 NA Mus musculus 50 Lnx2 ENSMUSG00000016520 ENSMUST00000016664 2 1 1 86 5 147844506 147844524 TCATTCAGGAAGTCTACCG 58 147841019 147844456 CATAGTTGTTGACCTGGAG 57 NA Mus musculus 50 Rbpjl ENSMUSG00000017007 ENSMUST00000017151,ENSMUST00000109356 1 2 2 173 2 164231370 164233240 ATGAGAAGCGGTTCTTCTG 59 164233559 164233577 AGTTCAACTTCTGGGTCTC 58 NA Mus musculus 50 Zc3h18 ENSMUSG00000017478 ENSMUST00000017622,ENSMUST00000093073,ENSMUST00000043855 1 3 3 98 8 124936967 124936985 ATGACATGTATGCAGACCT 58 124937046 124937177 CTTTCTTGGATTTCCCTCTC 57 NA Nonspecific, InUTR Mus musculus 50 Mapt ENSMUSG00000018411 ENSMUST00000106995,ENSMUST00000018555,ENSMUST00000100347,ENSMUST00000106993,ENSMUST00000106992,ENSMUST00000106991,ENSMUST00000106987,ENSMUST00000078906,ENSMUST00000106989,ENSMUST00000106988 2 10 10 96 11 104183843 104189295 GGGAATAAGAAGATTGAAACCC 59 104189352 104189370 CCACGGGTGACTTATACAC 59 NA Mus musculus 50 C1qbp ENSMUSG00000018446 ENSMUST00000078528 1 1 1 90 11 70793568 70793586 ATCAACAACAGCATCCCTC 59 70792271 70793514 TTGATGTCAGTTCTGGCTC 59 NA Mus musculus 50 Dusp14 ENSMUSG00000018648 ENSMUST00000018792,ENSMUST00000100705,ENSMUST00000108101 1 3 3 190 11 83862806 83864345 AATCCTTAGCACGAAGGAG 59 83862634 83862652 CAATGCCTCCTATGTCTCC 59 NA InUTR Mus musculus 50 Pnpo ENSMUSG00000018659 ENSMUST00000018803,ENSMUST00000107630 3 2 3 121 11 96801051 96801069 AAGAAACTCCCAGAGAAGG 58 96800626 96800966 TTCTTTCTCAGGTACTCCC 57 NA Mus musculus 50 P4ha2 ENSMUSG00000018906 ENSMUST00000093107 3 1 2 101 11 53939791 53942562 CTTAACTATATGAGCGATGTCG 58 53942972 53942991 GTTGTACCAGAATACAGCTG 58 NA Mus musculus 50 Scrn1 ENSMUSG00000019124 ENSMUST00000019268 3 1 1 82 6 54470850 54472763 AAGCAAGAAGAAAGCATCAC 59 54470787 54470808 GACTCAGAATCTATGCAAACAC 59 NA Mus musculus 50 H13 ENSMUSG00000019188 ENSMUST00000079247,ENSMUST00000089059,ENSMUST00000109826,ENSMUST00000109825 3 4 5 108 2 152506822 152506841 CATGTATTTCTTCGTGCTGG 59 152511876 152511894 GAAGAGCAGCTGATACTGG 59 NA DesignNoJunction Mus musculus 50 Socs2 ENSMUSG00000020027 ENSMUST00000020215 1 1 2 81 10 94875734 94877472 TCAAACAGGATGGTACTGG 58 94875671 94875690 CAAGAAAGTTCCTTCTGGAG 58 NA Nonspecific Mus musculus 50 Yeats4 ENSMUSG00000020171 ENSMUST00000020382 1 1 1 83 10 116657442 116657460 ATCACAGAAACAGGATGGG 59 116654566 116657395 GTACAGAGTCACAGGTCTC 58 NA Mus musculus 50 Jsrp1 ENSMUSG00000020216 ENSMUST00000020435 1 1 1 173 10 80274690 80274710 CCTCAAATTCAAACCTCAAGG 59 80273254 80273272 TTTCCATCTTCTTGAGCCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Dohh ENSMUSG00000020236 ENSMUST00000072751 1 1 1 199 10 80848631 80848649 ATGCTATCTCGTGGATCAG 58 80849177 80849195 TAGAACTTCCGGGTTACCA 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Dohh ENSMUSG00000020236 ENSMUST00000072751 3 1 1 134 10 80850722 80850740 ATTTCCAGTATGCAGACGG 59 80850838 80850856 TAAATCTGGATGTGAGGCA 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Myo1g ENSMUSG00000020437 ENSMUST00000003459,ENSMUST00000092902 3 2 2 80 11 6415141 6415161 TTATCCAGCTTATCCTGAAGC 59 6414910 6415100 TGTTGAAGTACTCGATGGTC 59 NA Mus musculus 50 1810073G14Rik ENSMUSG00000020523 ENSMUST00000020831,ENSMUST00000108850 2 2 2 91 11 57297632 57301077 TTTCTAGAGGCCTCAAACAG 59 57297560 57297578 GTCTTGCTCTCGATGAGAG 59 NA Mus musculus 50 Abca8b ENSMUSG00000020620 ENSMUST00000020948,ENSMUST00000106669 2 2 2 80 11 109799072 109799091 GGGAACCCATCTATATTGCT 58 109798121 109799030 GATTGCTTGCCATATTTGCT 59 NA Mus musculus 50 Ddx5 ENSMUSG00000020719 ENSMUST00000106779 2 1 3 132 11 106648280 106648298 GTGGAATCTTGATGAGCTG 58 106644704 106647821 AGAAGTTGGTCCTCTAACTG 58 NA Mus musculus 50 Unk ENSMUSG00000020770 ENSMUST00000106452,ENSMUST00000021116 1 2 2 106 11 115910663 115910681 AGACTACAGTAGAGGGCAG 59 115910751 115911361 ATAAGCAGTCTCTTGCCAC 59 NA Mus musculus 50 Aspa ENSMUSG00000020774 ENSMUST00000021119 1 1 1 81 11 73122256 73122277 GGAGAAAGTTGATTATCCAAGG 58 73119121 73122214 TTTCCAGTCTTGATCCTGC 59 NA Mus musculus 50 Tekt1 ENSMUSG00000020799 ENSMUST00000108502,ENSMUST00000108503,ENSMUST00000021155,ENSMUST00000050911 2 4 4 80 11 72165380 72165398 GAGGCATTCATAAATGGGC 58 72159273 72165336 TTCTTCCATAACCTTGGCC 59 NA Mus musculus 50 Numb ENSMUSG00000021224 ENSMUST00000085215,ENSMUST00000110298,ENSMUST00000021647 3 3 3 94 12 85144796 85144814 AGAGAAGGATCATTCCGTG 58 85142247 85144738 TCTGTCTCAGCTTTCTTGG 59 NA Mus musculus 50 Fbp2 ENSMUSG00000021456 ENSMUST00000021907 1 1 1 90 13 62950869 62955343 TTACAGAAAGACCACGGAG 58 62950797 62950815 ACCATACAGTGCATAACCC 59 NA Mus musculus 50 Habp4 ENSMUSG00000021476 ENSMUST00000021929 1 1 1 80 13 64283571 64285886 CAGATACAGAGACGATATGGTG 59 64285927 64285945 GATGTGATGTCATTGGCAG 58 NA Mus musculus 50 Btd ENSMUSG00000021900 ENSMUST00000090147 2 1 1 261 14 32475264 32475282 TCTGCATTATGTCTGGAGC 59 32475506 32479081 ATAATCTGCACACCCTTCTG 59 NA DesignRelaxed Mus musculus 50 Zmym2 ENSMUSG00000021945 ENSMUST00000022511 2 1 2 80 14 57569096 57569114 GATCAGACGACCAAATGGA 59 57569154 57575027 CCACATAAGTACTCCTGTATACC 59 NA Mus musculus 50 Tnfsf11 ENSMUSG00000022015 ENSMUST00000022592,ENSMUST00000110858 1 2 2 91 14 78699659 78699677 ATGAAACAAGCCTTTCAGG 58 78684132 78684232 CCTTCCATCATAGCTGGAG 59 NA Mus musculus 50 Dct ENSMUSG00000022129 ENSMUST00000022725 3 1 1 88 14 118439773 118442237 ATTATTAGGTCCAGGACGC 58 118439703 118439721 ACAACAGATGGTACCTGTG 59 NA Mus musculus 50 Cideb ENSMUSG00000022219 ENSMUST00000001497,ENSMUST00000100533 3 2 2 153 14 56376804 56376822 TCAGTATCCACTGTGAGCT 59 56374099 56376688 TCTCCAGGACCTTATCTAGC 59 NA Mus musculus 50 9130401M01Rik ENSMUSG00000022362 ENSMUST00000100655 1 1 2 60 15 57862651 57863552 GACAGGAATACGAGAAAGC 57 57862609 57862627 GTAGATGGTAACTGTTCGG 57 NA DesignRelaxed Mus musculus 50 Ly6g ENSMUSG00000022582 ENSMUST00000023246 2 1 1 76 15 74987230 74988961 AGTTATTGTGGACTCTCACAG 59 74988999 74989017 TATTGTCCAGAGTAGTGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr128 ENSMUSG00000022755 ENSMUST00000023437 1 1 1 80 16 56762225 56762244 CCAATATAGCAATCCAGTCC 57 56762052 56762184 TACTAGATCCTTTCTGTACGG 58 NA Mus musculus 50 Ccdc14 ENSMUSG00000022833 ENSMUST00000023532 2 1 1 80 16 34721891 34721911 CAGATACTGGGAATAACACTG 57 34721953 34723111 GCTGCTCTGTAAAGTTCTG 58 NA Mus musculus 50 D16Ertd472e ENSMUSG00000022864 ENSMUST00000023571,ENSMUST00000114220,ENSMUST00000114219,ENSMUST00000114218 3 4 4 108 16 78548332 78576179 GCTAAATCTCGAGGGAGTG 59 78548242 78548260 AGAACAATCCTGGTTTGCT 59 NA Mus musculus 50 Pcdhgc5 ENSMUSG00000023036 ENSMUST00000073447 3 1 9 141 18 37836530 37836548 TTGAAACGAAAGAAGACCC 57 37992950 37992969 GTATCAAACTGGTTGTTGGG 59 NA DesignNoJunction Mus musculus 50 Mmp25 ENSMUSG00000023903 ENSMUST00000024696 2 1 1 99 17 23769867 23776728 GGTCAACAGATGATAACGGA 59 23769787 23769805 ATAATGGAGTTGGGTGCAG 59 NA Mus musculus 50 Guca1a ENSMUSG00000023982 ENSMUST00000059348 3 1 1 176 17 47532632 47537171 CAAGGATGGCTACATTGAC 58 47532128 47532146 CAGGGATTAATGGTTCGGA 59 NA DesignNoJunction Mus musculus 50 Brd4 ENSMUSG00000024002 ENSMUST00000003726,ENSMUST00000114475 2 2 2 80 17 32366414 32366432 AGACACTATGGAAACACCA 58 32362649 32366373 TATAGTAATCAGGGAGGTTCAG 58 NA Mus musculus 50 Wiz ENSMUSG00000024050 ENSMUST00000064694,ENSMUST00000114463,ENSMUST00000114462,ENSMUST00000087703,ENSMUST00000003725 3 5 6 138 17 32493472 32493490 ACAGAAGCTGGAAGAAGTG 59 32492113 32493370 TTCCACTTCACAGAACCTG 59 NA Nonspecific Mus musculus 50 Epas1 ENSMUSG00000024140 ENSMUST00000024954,ENSMUST00000112273 3 2 2 87 17 87227330 87228040 AAGATGAGGTCTGCAAAGG 59 87228091 87228109 TTAGCTTCAGCTTGTTGGA 59 NA Mus musculus 50 M6prbp1 ENSMUSG00000024197 ENSMUST00000019726 3 1 1 108 17 56420905 56420923 CAATCACGCCTATGAACAC 58 56420276 56420833 TTTCACGGATTCCATCAGG 59 NA Mus musculus 50 Wdr46 ENSMUSG00000024312 ENSMUST00000025170 1 1 1 104 17 34080873 34081436 ACAGTAATGGCACAGTGTC 59 34081502 34081522 CTGTAGAATCTACTGCCACAG 59 NA Mus musculus 50 Jakmip2 ENSMUSG00000024502 ENSMUST00000097589 3 1 1 88 18 43741545 43741564 CTTAGGAGTGAGCATCAGTC 59 43737153 43741494 ATTTCATCCATCAGCCTCC 59 NA Nonspecific Mus musculus 50 Napg ENSMUSG00000024581 ENSMUST00000025474 3 1 1 81 18 63153980 63154000 GGTCTTAGTTCATCTACACAG 57 63154043 63154632 GTTAAAGCCTGGTATGCTG 58 NA Mus musculus 50 Cd63 ENSMUSG00000025351 ENSMUST00000105229,ENSMUST00000026407 2 2 2 60 10 128348915 128349031 TTAGAGACCAGGTGAAGTC 57 128349055 128349073 AGGTAATTCTGCATCTGCT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Mbd6 ENSMUSG00000025409 ENSMUST00000026476 3 1 1 103 10 126724218 126724462 TACTATATCAGCCCAAGTGG 58 126724134 126724152 TTAAGTGGACACTCCAGAC 58 NA Mus musculus 50 Tmc6 ENSMUSG00000025572 ENSMUST00000026659,ENSMUST00000106338 1 2 3 80 11 117634406 117634691 GAGGTAATGATTCAGAGACCTG 59 117634347 117634365 GTTAAGGACACTGACCACC 59 NA Mus musculus 50 Hspa4l ENSMUSG00000025757 ENSMUST00000077083,ENSMUST00000108086 1 2 2 82 3 40564769 40564787 GTGTTTATCGACATGGGAC 58 40564832 40570747 GTAGTAGCCAACACTTTCAG 58 NA Mus musculus 50 Heatr2 ENSMUSG00000025857 ENSMUST00000026975 1 1 1 80 5 139657456 139657474 GCATCATCAACATGTTCCT 58 139657518 139660490 TCAAGAGCTCAGGATAGAC 57 NA Mus musculus 50 Rp1h ENSMUSG00000025900 ENSMUST00000027032,ENSMUST00000115540 3 2 2 72 1 4342147 4342285 AAAGTTCCTAGTCTCCAGG 57 4342093 4342111 GTTTAAATGGCTCCCTTCC 58 NA DesignNoJunction Mus musculus 50 Crygf ENSMUSG00000025945 ENSMUST00000027082 2 1 1 272 1 65973139 65973239 AGATCACCTTCTATGAGGAC 57 65974554 65974572 CGTAGATCCTGATCCTGTG 58 NA DesignNoJunction Mus musculus 50 Boll ENSMUSG00000025977 ENSMUST00000087585,ENSMUST00000114423 2 2 2 80 1 55397436 55403230 GGGATTCCTCGTTCTAGTC 58 55397374 55397395 ATGGTAAGTATAAGGGTACCCA 59 NA Mus musculus 50 Icos ENSMUSG00000026009 ENSMUST00000102827,ENSMUST00000027162 2 2 2 92 1 61050803 61050822 TATTACTTCTGCAGCCTGTC 59 61050874 61051464 GAGCTGGGATTCATAAATATGC 59 NA Mus musculus 50 Vil1 ENSMUSG00000026175 ENSMUST00000027366 1 1 1 81 1 74466244 74466379 CTGGAGAGGTGGAAATGTC 59 74466422 74466442 CACTGGATAATAAGCTTCCCA 59 NA Mus musculus 50 Trp53bp2 ENSMUSG00000026510 ENSMUST00000027791 1 1 1 84 1 184389017 184389035 ATGAAGAGGAGATCGAGTG 58 184389083 184391828 CTTGGGTATAGTCCTAGCA 57 NA Mus musculus 50 Fh1 ENSMUSG00000026526 ENSMUST00000027810 3 1 1 80 1 177531685 177534077 CACATATAGGGTATGACAAAGC 58 177531626 177531646 CAATAGCCGTTTCCTTTAAGG 59 NA Mus musculus 50 Tbx19 ENSMUSG00000026572 ENSMUST00000027859 1 1 1 80 1 167083639 167083657 GGATGAAAGCTCCCATCTC 59 167082252 167083597 GAGAATTCAGCATTATCTGCC 59 NA Mus musculus 50 Acbd7 ENSMUSG00000026644 ENSMUST00000115089 3 1 1 120 2 3257709 3257831 AGACATCAACATTGCATGC 59 3257992 3258013 CGCTTTAGAAATATAGGCACAC 59 NA Nonspecific Mus musculus 50 E430002G05Rik ENSMUSG00000027188 ENSMUST00000028612 2 1 1 210 2 102390403 102390421 ATCTCATCGTTGCCAAGAG 59 102421063 102426766 CAAAGATGGTACAACCTGG 58 NA DesignRelaxed Mus musculus 50 Adal ENSMUSG00000027259 ENSMUST00000028702,ENSMUST00000066155,ENSMUST00000110662 3 3 3 80 2 120976017 120976036 GCTAAAGAGTTCTTCCTCTC 57 120976077 120976881 GTTAGCTTGTCCTATAGTTGG 57 NA Nonspecific Mus musculus 50 Chgb ENSMUSG00000027350 ENSMUST00000028826 3 1 1 131 2 132611758 132612198 GAAGAAATGGTGACTCGCT 59 132618074 132618094 TTTCTCTTCACCTTTGACCTC 59 NA Mus musculus 50 Cst12 ENSMUSG00000027443 ENSMUST00000028932 2 1 1 143 2 148615322 148618127 CTTCGTCAGAAATATACGCT 57 148618978 148618996 CTCCACAATGTAAGTGCAG 58 NA DesignNoJunction Mus musculus 50 Pdrg1 ENSMUSG00000027472 ENSMUST00000028972 3 1 1 80 2 152836066 152838128 TGATCCAGAAAGATCAAGAGC 59 152836006 152836024 AGAGGCGGTTAACTTTCAC 59 NA Mus musculus 50 1700008G05Rik ENSMUSG00000027530 ENSMUST00000029043 2 1 1 80 3 10250087 10250106 CAAGGAGATTTCCTTCAAGC 58 10247701 10250045 AAGATCACTGTACTCTTGCT 58 NA Mus musculus 50 Ncoa3 ENSMUSG00000027678 ENSMUST00000109252,ENSMUST00000088095,ENSMUST00000099082 2 3 3 80 2 165876989 165877123 AAGGAGAAGACTTGCAGTG 59 165877167 165877185 TAAAGCTCTCAGGACTGGA 59 NA Mus musculus 50 Ect2 ENSMUSG00000027699 ENSMUST00000108300,ENSMUST00000108298,ENSMUST00000029248,ENSMUST00000075155,ENSMUST00000108296 2 5 5 80 3 27044925 27044944 GCTGTATTGTACGAGTATGC 58 27043968 27044882 GTCACCAATTTGACAAGCT 58 NA Mus musculus 50 Casq2 ENSMUSG00000027861 ENSMUST00000029454 1 1 1 83 3 101930590 101931869 AGGAACATCAAAGACCCAC 59 101937306 101937324 TGTGGATCCCATTCAAGTC 59 NA Mus musculus 50 Tars2 ENSMUSG00000028107 ENSMUST00000029752,ENSMUST00000074339,ENSMUST00000098857 3 3 3 87 3 95558301 95558320 AGATATCACTTCCTGAAGGC 58 95557045 95558253 AGTGTTACACTGATCTGATGG 59 NA Mus musculus 50 Invs ENSMUSG00000028344 ENSMUST00000030029,ENSMUST00000107715,ENSMUST00000107713,ENSMUST00000107710,ENSMUST00000107707 1 5 5 80 4 48405553 48409113 GAGTAACTTTGCTGAAACGG 59 48409156 48409174 GATGTTCTTCCTTCCAGGT 58 NA Mus musculus 50 Wdr40a ENSMUSG00000028436 ENSMUST00000030145 1 1 1 80 4 41249694 41249712 GGAGACAACCCTAACAGTC 59 41248413 41249651 ATCCTTGTGTCCATCATCAC 59 NA Mus musculus 50 Ubap1 ENSMUSG00000028437 ENSMUST00000072866,ENSMUST00000108060,ENSMUST00000108059 1 3 3 121 4 41313954 41318767 GATGTTCATGGGACTTTCAG 58 41318851 41318869 ACAACCTGTAAGCAGTCAG 59 NA Mus musculus 50 Tmem48 ENSMUSG00000028614 ENSMUST00000030357 1 1 1 88 4 107046918 107047693 AACTGAGAGCTTAGATAGCC 58 107047744 107047762 TATAGCCCATGAATGCTCC 58 NA Mus musculus 50 Hpca ENSMUSG00000028785 ENSMUST00000030572 3 1 2 81 4 128795657 128795675 CCTTCAGCATGTATGACCT 59 128790011 128795612 ATCTTGTAAATGGCCTGCA 59 NA Mus musculus 50 Ptpru ENSMUSG00000028909 ENSMUST00000105987,ENSMUST00000030741,ENSMUST00000105986,ENSMUST00000105985,ENSMUST00000105984 1 5 6 91 4 131379798 131379816 TATGACGACTTCCAATGGG 59 131325779 131376891 GCATTGACCATCAAGTAGG 58 NA DesignNoJunction Mus musculus 50 Gltpd1 ENSMUSG00000029073 ENSMUST00000105586 2 1 2 147 4 155240787 155241252 ACTATATTGCCGGACTGTG 59 155240658 155240676 GGAGTGATAGTTAGCCAGC 59 NA Mus musculus 50 Hgfac ENSMUSG00000029102 ENSMUST00000030985 3 1 1 114 5 35386899 35387016 GTAACATTGTTCCCACAGAG 58 35387093 35387111 TAGAGCAGGTCAGAATTCC 58 NA Mus musculus 50 Zfp509 ENSMUSG00000029127 ENSMUST00000094833,ENSMUST00000114114,ENSMUST00000075525,ENSMUST00000114113 2 4 4 81 5 38605616 38607697 CCAGTATTTCAGGAGCCTC 59 38605553 38605571 GCCACTGACATTTGTAACG 59 NA Mus musculus 50 Diablo ENSMUSG00000029433 ENSMUST00000111587 3 1 1 143 5 123967838 123967977 GAGCCAGAGTTGAGATGAC 59 123962684 123962702 GATTCCTGGCAGTTATGGA 59 NA Mus musculus 50 4921520G13Rik ENSMUSG00000029607 ENSMUST00000079624 1 1 2 140 5 144654493 144655390 TCATGTAAGCAGACACAGC 59 144652680 144652698 CATCAGGTGAAGGGTAGTG 59 NA DesignNoJunction Mus musculus 50 Nfe2l3 ENSMUSG00000029832 ENSMUST00000061507 1 1 2 70 6 51386698 51386716 TTCCAGGCGAATCTAACAC 59 51386750 51386768 ATCCTCTTTAAGGGCATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmcc1 ENSMUSG00000030126 ENSMUST00000088896,ENSMUST00000032222 1 2 3 80 6 115974951 115992903 GGAAGAGCGGTATAGATGTG 59 115974890 115974910 AAGTTCAGGATCTCATTCTGG 59 NA Mus musculus 50 Lmo3 ENSMUSG00000030226 ENSMUST00000067437 1 1 1 95 6 138325836 138364943 TATCTGAGGCTGTTTGGTG 59 138325759 138325778 GTACACATTATCCTTGGCAC 58 NA Mus musculus 50 Kras ENSMUSG00000030265 ENSMUST00000032399,ENSMUST00000111710,ENSMUST00000111709,ENSMUST00000032397 1 4 4 91 6 145182936 145195223 ACGATAGAGGACTCCTACAG 59 145182864 145182882 CTGTACTCCTCTTGACCTG 58 NA Mus musculus 50 Klrb1c ENSMUSG00000030325 ENSMUST00000032474 1 1 1 80 6 128733791 128734135 CCAAGAAGAACTGAGATTCC 57 128733730 128733748 GGCAATGTGAACCTTAGTC 58 NA Mus musculus 50 Qpctl ENSMUSG00000030407 ENSMUST00000032566 3 1 1 99 7 19730303 19730321 CAAAGGACTCCCTCTATGG 58 19730098 19730240 ACAAAGAGCTCAATAGCCT 58 NA Mus musculus 50 Dmwd ENSMUSG00000030410 ENSMUST00000108478,ENSMUST00000032570,ENSMUST00000108479 3 3 3 85 7 19663573 19665395 TATTCAATGAAGAGCGGCT 59 19665444 19665462 AGAAGCAAGGAACAGACTC 59 NA Mus musculus 50 Gas2 ENSMUSG00000030498 ENSMUST00000107592,ENSMUST00000051912,ENSMUST00000107591 3 3 3 175 7 59208659 59248666 CCTCTTCATCAGGATGCTG 59 59248805 59248823 GATTCATGTCCTTCAGGGT 58 NA Mus musculus 50 Crtc3 ENSMUSG00000030527 ENSMUST00000032741 1 1 1 81 7 87735294 87735312 CTCATTCCACTTGAGACCA 58 87734821 87735252 GTTGCTGTTTGTATCTTCTGTC 59 NA Mus musculus 50 Nucb2 ENSMUSG00000030659 ENSMUST00000032895 3 1 1 80 7 123665483 123667819 ATAGAGCCACCAGATACTG 57 123667862 123667881 GAAATGTGGATCTGTTTCCA 58 NA Mus musculus 50 Klk10 ENSMUSG00000030693 ENSMUST00000014058 2 1 1 140 7 51038971 51038989 CATGATGCTGAAACTGAGC 59 51039093 51039695 TTGTACTTCACTCTTCGGC 59 NA Mus musculus 50 Chrdl2 ENSMUSG00000030732 ENSMUST00000032977 2 1 1 60 7 107177853 107182163 TGGTGAAAGGAATCTACCA 57 107182186 107182205 TTCTGGAAATCTTGCTTCCT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Cox6a2 ENSMUSG00000030785 ENSMUST00000033049 3 1 1 125 7 135349435 135349454 CAGAGTTCATCCCGTATCAC 59 135349242 135349260 ATCAAGGGTGCTCATAACC 59 NA DesignNoJunction Mus musculus 50 Cd37 ENSMUSG00000030798 ENSMUST00000033063,ENSMUST00000098461,ENSMUST00000107797 1 3 3 270 7 52493932 52494037 TCTTCTTTGTACTAGGCGG 58 52492382 52492400 TGAGTGGAAATGAGGATGC 59 NA DesignNoJunction Mus musculus 50 Amelx ENSMUSG00000031354 ENSMUST00000112119,ENSMUST00000062820 3 2 5 82 X 165620562 165620582 TATCAATACTGACAGGACTGC 59 165620135 165620422 CATAGGAAGGATACGGCTG 59 NA Mus musculus 50 Dctn6 ENSMUSG00000031516 ENSMUST00000033913 3 1 1 81 8 35158021 35160257 CCTCATCATAAATGCTCATCC 58 35157960 35157980 GTTGGTGCCAATAATCATAGG 59 NA Mus musculus 50 Coq9 ENSMUSG00000031782 ENSMUST00000034234 3 1 1 83 8 97375846 97377024 GTCCACTGACTTTAACTGGT 59 97377070 97377088 GAATCCTGCATCATCACCA 59 NA Mus musculus 50 Dcun1d5 ENSMUSG00000032002 ENSMUST00000034499 2 1 1 80 9 7203489 7203507 GTCTATGTTAGCTCTGCTG 57 7203551 7205311 CGATACTTTGATTGCTCCA 57 NA Mus musculus 50 Smarca4 ENSMUSG00000032187 ENSMUST00000098948,ENSMUST00000034707,ENSMUST00000098946 3 3 3 80 9 21469345 21470211 AAGGTTTCTTACAAGGGCT 58 21470254 21470273 CAGTAAGACGTTGAACTTCC 58 NA Mus musculus 50 Sh3bgrl2 ENSMUSG00000032261 ENSMUST00000085286 1 1 3 72 9 83471193 83471213 CCACCTCAGATATTTAATGGG 57 83529716 83529734 CTTTGCTCTGTGTAAGCTG 58 NA DesignNoJunction Mus musculus 50 Punc ENSMUSG00000032394 ENSMUST00000034961 3 1 1 90 9 64992292 64992311 TGAGGGTGACTATGAATGTG 59 64992364 65025215 GAAGTCGGACATAGTTGCA 59 NA Mus musculus 50 Atr ENSMUSG00000032409 ENSMUST00000034980,ENSMUST00000098471 2 2 2 80 9 95799498 95799517 GAGCTAACAAGAGCTTACCT 59 95799560 95804090 AAGCAACTCCTGAATAGCA 58 NA Mus musculus 50 2410012M07Rik ENSMUSG00000032460 ENSMUST00000035035 1 1 1 60 9 98765814 98765833 AGGAGGAAACTTTCTGTGAG 59 98765856 98765874 AAGTCTGCATCCTCATCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dclk3 ENSMUSG00000032500 ENSMUST00000111879,ENSMUST00000035081 3 2 2 98 9 111371737 111371757 TGATCACAGACTTGTGTAAGG 59 111371817 111385137 CTTCATTTCGCTGAACCAG 59 NA Mus musculus 50 Ablim3 ENSMUSG00000032735 ENSMUST00000049378 3 1 1 81 18 61981672 61983529 GTCATCTGTGCTAAAGTGGA 59 61981610 61981629 CCTCGTAGATGGACTTAACC 59 NA Mus musculus 50 Ank2 ENSMUSG00000032826 ENSMUST00000043741,ENSMUST00000090335,ENSMUST00000043779 3 3 5 80 3 126751145 126751164 ATGGGAATGTAAATGTGGCA 59 126749726 126751103 GAGGAGTGATTCCATTCCTG 59 NA Mus musculus 50 Slc7a6os ENSMUSG00000033106 ENSMUST00000035925 1 1 1 80 8 108725044 108726143 GAAGATTCCAGAGGCTCTG 59 108724982 108725001 GTATTTGCTCCACATCAGTC 58 NA Mus musculus 50 Abhd10 ENSMUSG00000033157 ENSMUST00000036411,ENSMUST00000066983 1 2 2 92 16 45737696 45737714 AACTTAGCAGAGTGCACAG 59 45737129 45737640 GGATCCAACCAGTATCTGC 59 NA Mus musculus 50 P2ry5 ENSMUSG00000033446 ENSMUST00000044405 3 1 1 60 14 73639220 73639238 CATGTACCCGATCACTCTC 59 73639259 73639280 GTAAACAATAGGGTCAAAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tpsb2 ENSMUSG00000033825 ENSMUST00000115129,ENSMUST00000069616 2 2 2 115 17 25504246 25504397 TGATAATGACGAGCCTCTC 58 25504476 25504494 AATCATCTCCCGTGTAGAG 58 NA Mus musculus 50 BC050789 ENSMUSG00000034151 ENSMUST00000107778 3 1 1 80 3 74875604 74875622 AAAGACTCGATGTCTTCCC 58 74865566 74875560 TGTCTTCTGAAACTGTGGA 58 NA Nonspecific Mus musculus 50 Agpat1 ENSMUSG00000034254 ENSMUST00000037489,ENSMUST00000114140 1 2 2 100 17 34747498 34747516 AAGATGGCCTTCTACAACG 59 34747579 34747825 CGCAAGATCTTCATGTTCTC 59 NA Mus musculus 50 4933407C03Rik ENSMUSG00000034390 ENSMUST00000039866,ENSMUST00000095172 2 2 2 84 8 119946794 119950394 AATTCTTCTGCAAGCACTG 58 119950441 119950460 TTAAGGATCCTCTGAACCAC 58 NA Mus musculus 50 Polr3b ENSMUSG00000034453 ENSMUST00000077175 2 1 1 80 10 84159740 84159758 CACAGTGACACAGATTCCT 59 84159802 84162152 CCTTTGTACGTGATAGGCA 59 NA Mus musculus 50 Rsrc1 ENSMUSG00000034544 ENSMUST00000065074,ENSMUST00000046542,ENSMUST00000065047,ENSMUST00000065115 3 4 4 160 3 66984774 67010353 GATTAGAACATCTGCCTCCA 59 67153838 67153856 GACTTGTTCTACCAGGGTG 59 NA Mus musculus 50 Pof1b ENSMUSG00000034607 ENSMUST00000039887,ENSMUST00000113391 2 2 2 81 X 109760430 109760736 AGAATACAGGTGTCTGAGAC 58 109760368 109760389 CCATCTCCATATAATGATTGCC 58 NA Mus musculus 50 Dhx8 ENSMUSG00000034931 ENSMUST00000039152,ENSMUST00000107181 1 2 2 80 11 101616172 101618910 ACACCTATTTCTCAGGCTC 58 101618952 101618972 GTACAGTCTGTAACACTTTCC 58 NA Mus musculus 50 Plekhh3 ENSMUSG00000035172 ENSMUST00000043397,ENSMUST00000107291 1 2 2 85 11 101029602 101029967 CATCTCAGACAGACTGCAG 59 101029535 101029553 CAATGATGTCAGGGTCCTC 59 NA Mus musculus 50 Slfn8 ENSMUSG00000035208 ENSMUST00000038141,ENSMUST00000092838 1 2 3 80 11 82818272 82826874 ATTTCAAGTGTCACCAGAC 57 82818210 82818229 TTTAGTCTCTTATGCTGGGA 57 NA Mus musculus 50 Lcat ENSMUSG00000035237 ENSMUST00000038896 1 1 1 88 8 108466287 108466305 GGACTTCTTCACCATCTGG 59 108466140 108466235 GGTTGTAGACAATCCTGGT 58 NA Mus musculus 50 Rsf1 ENSMUSG00000035623 ENSMUST00000042399,ENSMUST00000107153 2 2 2 81 7 104827587 104827606 TGATCTTGACAGTGATAGCA 58 104827650 104829144 AAACTCATCCTGAGATCCG 58 NA Mus musculus 50 Ptprq ENSMUSG00000035916 ENSMUST00000050702,ENSMUST00000043930 1 2 2 80 10 107123316 107123334 TCTATGCAATGGAACTGGA 58 107122689 107123272 TCTTCAACCCTGTGATGAG 58 NA Mus musculus 50 Mbnl3 ENSMUSG00000036109 ENSMUST00000114876,ENSMUST00000114875,ENSMUST00000041495 3 3 3 81 X 48484794 48492395 CAGATGTCATCTCTTGCGT 59 48484731 48484752 GAGTCATGTAAGGATTGAAAGC 59 NA Mus musculus 50 B230317C12Rik ENSMUSG00000036186 ENSMUST00000074240 3 1 1 84 2 26490675 26491069 TTCCTCAAGGCTAACTTAGG 58 26491116 26491134 TATCCTTGTTGAAGTCCGC 59 NA Mus musculus 50 Srp72 ENSMUSG00000036323 ENSMUST00000101087 3 1 1 81 5 77405533 77407615 GTGTTAGCCAATAACTCCC 57 77407660 77407678 TTGTCTTCAAGGCATTCTC 57 NA Mus musculus 50 Xtrp3s1 ENSMUSG00000036814 ENSMUST00000040960 2 1 1 82 9 123566572 123566591 ATTATCTACTTGGTCCGTGG 58 123565570 123566527 AGCTGTTCCATCTTAGGTG 58 NA Mus musculus 50 Wdr62 ENSMUSG00000037020 ENSMUST00000108190,ENSMUST00000047189,ENSMUST00000085760 3 3 3 80 7 31056672 31056691 AATATGAAGCACATCGTGTC 58 31055821 31056630 CACCACAATGTCTTTCTTCC 59 NA Mus musculus 50 Clca4 ENSMUSG00000037033 ENSMUST00000029931 1 1 1 85 3 144488230 144488248 GGAGGCTGAGTTTATAGGT 58 144486487 144488183 CGTATCTATATGCTCTTCCCT 58 NA Mus musculus 50 Socs5 ENSMUSG00000037104 ENSMUST00000041369 3 1 1 73 17 87520144 87532977 TGGAGCTCTTCTAATCAATGG 59 87533012 87533030 GAAGAGATTCTGGCATCTG 57 NA DesignNoJunction, InUTR Mus musculus 50 Hgsnat ENSMUSG00000037260 ENSMUST00000037609 3 1 1 80 8 27056816 27056933 AAACAAGAATCTCTGGTCCA 58 27056755 27056773 ACTGGGTAGAGAATGAGGA 58 NA Mus musculus 50 Taf2 ENSMUSG00000037343 ENSMUST00000041733 3 1 1 80 15 54891637 54893621 CATACATGCATGAGGTTACC 58 54891576 54891594 CTTCGTGAATGTATGACGT 57 NA Mus musculus 50 Rcor3 ENSMUSG00000037395 ENSMUST00000073279,ENSMUST00000110849 1 2 2 83 1 193949801 193949819 AGTGGAAGACAAAGTCCTG 59 193948238 193949755 TTATCTGGAAGCATTTGCTG 58 NA Mus musculus 50 Serpine1 ENSMUSG00000037411 ENSMUST00000041388,ENSMUST00000077523 2 2 2 81 5 137545409 137546913 CAAAGTCAATGAGAAGGGC 58 137545346 137545365 GATCTCATTCTTGTTCCACG 58 NA Mus musculus 50 Erv3 ENSMUSG00000037482 ENSMUST00000040941 2 1 1 60 2 131681732 131681751 GGTTGATTGGCATACTAAGG 58 131681691 131681709 TCTCCATCTGTCATTCCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nme1 ENSMUSG00000037601 ENSMUST00000021220,ENSMUST00000107844 2 2 2 61 11 93827123 93827141 TTGGTCTGAAGTTTCTGCA 59 93824601 93824619 CTTCAGGTCAGTGTAGTGC 59 NA DesignNoJunction Mus musculus 50 Tnfrsf23 ENSMUSG00000037613 ENSMUST00000035742,ENSMUST00000097931 1 2 2 80 7 150867415 150867434 TCATACTCCTTCAACTGTCC 58 150865968 150867372 GACAAATGTACCTGAGGGA 58 NA Mus musculus 50 Gm462 ENSMUSG00000037976 ENSMUST00000039475 1 1 1 84 6 127607678 127607696 GAAGACAGTCACTGTGGAC 59 127607741 127607846 CTGACTGATACAGCGATATCTC 59 NA Mus musculus 50 Phf20 ENSMUSG00000038116 ENSMUST00000088600,ENSMUST00000037401 3 2 2 92 2 156079968 156079986 CAAATAAACCAGCAAGTGC 57 156080042 156090030 CACAGTGTAAGTACCATCC 57 NA Mus musculus 50 4933403F05Rik ENSMUSG00000038121 ENSMUST00000042852 1 1 1 80 18 68428597 68432225 ATGTTTAAGATCGCAACGC 59 68428535 68428555 GTGACTTCGCAAATACTTCAC 59 NA Mus musculus 50 Nos1ap ENSMUSG00000038473 ENSMUST00000082106 2 1 1 85 1 172279622 172305389 CCTATCTACAGGATCTTCTATGTC 59 172279560 172279578 ATATTGCTGGCACCATCTC 59 NA Mus musculus 50 BC021785 ENSMUSG00000038528 ENSMUST00000045524 2 1 2 92 10 39693466 39693486 TCTTTACCTCACTCCTTTCTG 59 39689776 39693412 TTGGCTGTATCCAGAACAC 59 NA DesignNoJunction Mus musculus 50 Hace1 ENSMUSG00000038822 ENSMUST00000037044,ENSMUST00000059925 1 2 2 80 10 45372474 45372492 CCTCATCTCCCAGTAATGG 58 45372536 45390161 ATTCCAAAGGCTTGAACAC 58 NA Mus musculus 50 Pi4kb ENSMUSG00000038861 ENSMUST00000107251,ENSMUST00000072287 3 2 2 109 3 94808287 94808566 TTGTGGATGTAATGGGTGG 59 94808639 94808657 AATCTGTACCACCTTGTCC 58 NA Mus musculus 50 Zzz3 ENSMUSG00000039068 ENSMUST00000106106 1 1 5 233 3 152083096 152109775 CTTCAACAGTTATCAGAGACTG 58 152111810 152111828 AAGTTCCCAAGGCTATTGG 59 NA DesignRelaxed Mus musculus 50 Camk1d ENSMUSG00000039145 ENSMUST00000044009,ENSMUST00000114987 3 2 3 113 2 5283166 5366126 GTCATGCAACTTGTGTCTG 59 5283071 5283090 ATAGTATACGGCATCCAGGA 59 NA Mus musculus 50 Ankrd13c ENSMUSG00000039988 ENSMUST00000040787 1 1 1 80 3 157638246 157651610 GTATCAACATCAGGCTTGAC 58 157651651 157651671 TGAAGATGAAGCTTAGATCCC 59 NA Mus musculus 50 Wdr47 ENSMUSG00000040389 ENSMUST00000051145 1 1 1 80 3 108417328 108421419 CCCAGCATTTGGAATTTACC 59 108421462 108421480 AATCGTCTTTAGAAGGGCA 58 NA Mus musculus 50 Ggt6 ENSMUSG00000040471 ENSMUST00000076443 2 1 3 60 11 72250311 72250329 TACATCCTCATGCAACAGG 59 72250656 72250677 GAAGAGCTATTGTAGAAGAGAC 57 NA DesignNoJunction Mus musculus 50 Erg ENSMUSG00000040732 ENSMUST00000113848,ENSMUST00000113846,ENSMUST00000113845,ENSMUST00000077773 3 4 4 117 16 95631425 95631443 CAAGATGAGTCCCAGAGTC 59 95611637 95631344 CTCATCAGGTGAGTTCCTG 59 NA Mus musculus 50 Wwp1 ENSMUSG00000041058 ENSMUST00000108246,ENSMUST00000035982 1 2 2 80 4 19567221 19567353 AAGAACTCAAGGCTTACCA 58 19567159 19567177 AAGTACCTAACACCTTCCC 58 NA Mus musculus 50 Nacad ENSMUSG00000041073 ENSMUST00000045713 2 1 1 105 11 6498085 6498103 GACATTGAACTGGTGATGG 58 6497903 6498017 TTGTCAGTTCCATGATAGCA 59 NA Mus musculus 50 Bdkrb1 ENSMUSG00000041347 ENSMUST00000041229 3 1 1 61 12 106842768 106842787 CTGTTCATCAGCATCTTCCT 59 106842811 106842829 TATACCAGCAACCTGTAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ptpre ENSMUSG00000041836 ENSMUST00000073961,ENSMUST00000097980,ENSMUST00000054880 1 3 3 82 7 142850759 142850777 AGGAACCTTTGAACTAGCA 58 142850823 142854941 CTCTGCAATGATCATTGGG 58 NA Mus musculus 50 8430432A02Rik ENSMUSG00000041878 ENSMUST00000039080 2 1 1 60 1 43149822 43149841 TTCCACTCACTTCTTTGAGG 59 43149863 43149882 CTTTATGGCTTGACACAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Znrf3 ENSMUSG00000041961 ENSMUST00000109867,ENSMUST00000049538 3 2 2 111 11 5187460 5187478 CGAGTACTTTGACATGGGA 58 5186256 5187386 CATGGAATTCTGACTACGAC 58 NA Mus musculus 50 Sgsm3 ENSMUSG00000042303 ENSMUST00000042506 3 1 2 175 15 80833868 80834247 ACTCACAGAAAGAAGAATCCTC 59 80836919 80836937 ATGGTTATGGGTGAACTCC 58 NA Mus musculus 50 Hps4 ENSMUSG00000042328 ENSMUST00000112359,ENSMUST00000035279,ENSMUST00000112360 1 3 3 80 5 112793571 112793589 CTCATCTTACAGACCTGCC 59 112793632 112795934 CTGGGAATTCACAATCAGTC 58 NA Mus musculus 50 Psp ENSMUSG00000042459 ENSMUST00000048103 3 1 1 115 2 153837229 153839425 TGTTGGGAAGACGATTACC 59 153840158 153840176 GACGTACTGAAGCAATGGA 59 NA Mus musculus 50 Kcnj12 ENSMUSG00000042529 ENSMUST00000041944,ENSMUST00000108717 2 2 3 113 11 60880438 60882634 CTAAACAAGCCCATGAAGTG 59 60882710 60882728 ATGATACGATGCTGTAGGG 58 NA InUTR Mus musculus 50 Zp3r ENSMUSG00000042554 ENSMUST00000039862 3 1 1 82 1 132495571 132495748 CAGAATGTGTAATTGCCACG 59 132495508 132495527 CGTGTACAGGTCATCATCTC 59 NA Mus musculus 50 EG384639 ENSMUSG00000042668 ENSMUST00000048113 3 1 1 60 7 75764323 75764344 TCTGATGGTAGGTTTCTTAGAG 58 75764365 75764383 GACTGTAAACAGCACTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700015E13Rik ENSMUSG00000042800 ENSMUST00000056991 3 1 1 62 1 172241875 172241893 CCCAAGAGAACACATACCC 59 172241918 172241937 TGATAGAATCCAAACCATGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000042857 ENSMUSG00000042857 ENSMUST00000059598 1 1 1 83 13 95128501 95128519 CTAGACGTGAAAGCTCCTC 59 95128436 95128454 AAACTTAGGCAAAGCTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 NM_025817.3 ENSMUSG00000043496 ENSMUST00000059421 2 1 1 68 6 53769656 53769674 CTGGAATCTAACCGGATCC 59 53769606 53769624 GAGGAATCGAAGCTTACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700048O20Rik ENSMUSG00000043773 ENSMUST00000063103 2 1 1 82 9 121849860 121849878 TGACACTTGATCAGAAGGC 59 121849923 121854742 CATATCATAGCAACCCAGCA 59 NA Mus musculus 50 Cep164 ENSMUSG00000043987 ENSMUST00000114628,ENSMUST00000084234,ENSMUST00000040263 3 3 4 80 9 45587689 45587787 TGAGAACCAAATTAGAACCG 57 45587628 45587646 CTTTCAGCTTTCTGGAGAG 57 NA Mus musculus 50 1700007I06Rik ENSMUSG00000044056 ENSMUST00000054327,ENSMUST00000109377 3 2 2 61 11 32424401 32424420 TGTTGATTTGCATACTGCTG 59 32423670 32423688 ATGGCGGTACATAAAGTGG 59 NA DesignNoJunction Mus musculus 50 1110018H23Rik ENSMUSG00000044172 ENSMUST00000054930 1 1 1 81 17 25260223 25260241 GATGCAGAAGTTCCAAACC 59 25260286 25261529 CGTGTTGCAAATGTTTCCT 59 NA Mus musculus 50 Zbtb7c ENSMUSG00000044646 ENSMUST00000058997 1 1 1 98 18 76060406 76171293 GTAATGACAGGAAATGAGCAG 59 76296489 76296507 TCATTGGCCATGTTCTCAG 59 NA InUTR Mus musculus 50 Hnrph2 ENSMUSG00000045427 ENSMUST00000113202 2 1 5 130 X 131137290 131137464 CAGGGTCAAAGGATAATTCC 57 131137556 131137575 CACAAACTAGAGTTCACCAG 58 NA InUTR Mus musculus 50 Olfr459 ENSMUSG00000045479 ENSMUST00000050412 3 1 1 60 6 41722056 41722074 ACAATTGTTCCCTTGATGC 58 41722014 41722035 TCAGAGATATTGTCTGCTTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 F730047E07Rik ENSMUSG00000045751 ENSMUST00000108222,ENSMUST00000050446 1 2 2 82 4 24456242 24456260 CTTTGTGATTTCTGGGAGC 58 24456306 24460063 CTGAAGGAGCTATTCAGGT 58 NA Mus musculus 50 Il17c ENSMUSG00000046108 ENSMUST00000050963 2 1 1 93 8 124946215 124946233 CTCTAGCTGGAACACAGTG 59 124946290 124947209 ATGCGATATCTCCATGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2410166I05Rik ENSMUSG00000046671 ENSMUST00000102550,ENSMUST00000116279,ENSMUST00000097848 2 3 3 149 4 134088157 134088553 GAAGCCAATGTGACTATCC 57 134086672 134086690 TTTCAAACACAGGTCAGAG 57 NA Mus musculus 50 Prl7a2 ENSMUSG00000046899 ENSMUST00000006660 2 1 1 83 13 27757802 27757820 ATGGGCTGTTTCATAATGC 58 27756954 27757758 GATTGACTGTATATGTCTTGCG 59 NA Mus musculus 50 Cyp4x1 ENSMUSG00000047155 ENSMUST00000106545,ENSMUST00000051400 2 2 2 80 4 114794373 114794469 ATAAACGGCACCTATGAGTC 59 114794312 114794331 CCAGAAATTGTACAAGCGAG 59 NA Mus musculus 50 Helt ENSMUSG00000047171 ENSMUST00000058636 3 1 1 88 8 47378565 47378583 GATGACAGTGCAGTACCTC 59 47378057 47378075 AGTAGTTGGCAAATTCTGC 58 NA DesignNoJunction Mus musculus 50 Gap43 ENSMUSG00000047261 ENSMUST00000102817 1 1 1 198 16 42292083 42292101 GCTACCACTGATAACTCCC 59 42249219 42291921 CTACAGCGTCTTTCTCCTC 59 NA Mus musculus 50 5730446C15Rik ENSMUSG00000047368 ENSMUST00000052556 2 1 1 99 19 21755447 21755468 CTGCTGTTATTCTTCATTCTCC 59 21755527 21758596 TTGTCAATGTTTGGGAATGC 59 NA Mus musculus 50 Apof ENSMUSG00000047631 ENSMUST00000050901 3 1 1 60 10 127706581 127706599 GTGGTTGACCTACTACCAG 58 127706623 127706641 CGTAATACAAAGCTGTGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp454 ENSMUSG00000048728 ENSMUST00000078418 2 1 3 141 11 50696741 50696761 CAACCAGATATGTTCTTTCCC 58 50691431 50691560 TTTCTGTAACCGGAACCTG 59 NA DesignNoJunction Mus musculus 50 C5ar1 ENSMUSG00000049130 ENSMUST00000050770 3 1 1 60 7 16834124 16834142 TACTGGTACTTTGATGCCA 58 16834082 16834100 ACATGTTGAGCAGGATGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rarres1 ENSMUSG00000049404 ENSMUST00000054825 3 1 1 81 3 67294899 67294918 CAAGAGAAGGATTATCGGCT 59 67289189 67294855 CATGACTGTCAGGTATGCT 59 NA Mus musculus 50 1810009O10Rik ENSMUSG00000049489 ENSMUST00000059468 3 1 1 64 11 78564969 78564987 TTCTTCTGCGAGATCAACC 59 78564923 78564942 AAGTAAATGGAAGACATGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tsku ENSMUSG00000049580 ENSMUST00000094161 1 1 1 135 7 105501634 105501998 AACAGATTTCACGTGTCAC 58 105501517 105501535 CTGAAACTGTCAAAGAGGC 58 NA InUTR Mus musculus 50 A230107C01Rik ENSMUSG00000049676 ENSMUST00000085819,ENSMUST00000047846 2 2 3 80 7 29975038 29975243 CTGCTCACCAAGATTAAAGTC 58 29974978 29974998 GGAAGTCTTCTTGATGTTACG 58 NA Mus musculus 50 Gal3st1 ENSMUSG00000049721 ENSMUST00000078757,ENSMUST00000063004,ENSMUST00000109981 3 3 3 85 11 3897016 3897034 CTATGTGGTACCTCCACTG 58 3897957 3897975 CTGGCTCATTGGGAATAGG 59 NA DesignNoJunction Mus musculus 50 Ch25h ENSMUSG00000050370 ENSMUST00000050562 3 1 1 89 19 34549083 34549101 ATACATGAGCTTCTGGGAG 58 34549012 34549030 GTAAAGATGGTGAGTGGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Il31ra ENSMUSG00000050377 ENSMUST00000051756,ENSMUST00000099168,ENSMUST00000091226 1 3 3 81 13 113331490 113334108 GATTGTTGTGGAAGAAGGC 59 113331427 113331446 CTGTTCTCTGCAAAGTACTG 58 NA Mus musculus 50 Amigo1 ENSMUSG00000050947 ENSMUST00000106659 3 1 4 115 3 107990919 107990937 AGTACAAGGAAAGTGCCTG 59 107994636 107994655 CTAGTTATAGAGCCCATGGG 58 NA DesignNoJunction Mus musculus 50 Rgs13 ENSMUSG00000051079 ENSMUST00000052375,ENSMUST00000111941 3 2 2 95 1 146014468 146018555 CCCTTCAAACCTTACTTTGG 58 145987982 145988002 TATGCTGTGTACACTATTGGG 59 NA Mus musculus 50 Bhlhb8 ENSMUSG00000052271 ENSMUST00000060747 1 1 1 65 5 144952141 144952159 GGAGAACAGTGTTCAGAGG 59 144952188 144952206 TTGAGTTTATGCATCCGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rnaseh2a ENSMUSG00000052926 ENSMUST00000109736,ENSMUST00000065049,ENSMUST00000109738 1 3 3 80 8 87489333 87489479 AAAGTGGCAGACTCTAAGAC 59 87489272 87489290 CACAAAGTCTCCATCCTCC 59 NA Mus musculus 50 9430076C15Rik ENSMUSG00000053007 ENSMUST00000114409,ENSMUST00000047450 2 2 3 113 6 53554572 53560423 TCTTGATGCCTATGGAGAG 58 53560500 53560518 CTTCTGAATGCATTGGCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000054032 ENSMUSG00000054032 ENSMUST00000066813 2 1 1 85 5 100628880 100628898 ACTCACTTTGTAGACCAGG 58 100628947 100628965 CGCTTACGAGCTATTTCAC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ceacam10 ENSMUSG00000054169 ENSMUST00000038069 1 1 1 137 7 25563471 25563489 ATTACTCCGATTTCTGTGC 57 25565973 25565992 GTGAACAAGTAGAAGAACGT 57 NA DesignNoJunction Mus musculus 50 Aes ENSMUSG00000054452 ENSMUST00000002518,ENSMUST00000105318 1 2 2 107 10 81026896 81027431 ACGTCATGTACTATGAGATGTC 59 81027629 81027647 ACAAATAGGGCAGAACCTG 59 NA Mus musculus 50 E130309D02Rik ENSMUSG00000054615 ENSMUST00000067765 3 1 1 61 5 144077358 144077376 ACCCTCTTAACTGCTATGC 59 144077400 144077419 ACCTTGTACTAAGATTCCCA 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Gja6 ENSMUSG00000055691 ENSMUST00000069417 2 1 1 60 X 157341473 157341491 CACTTGGAGACAATTGCAG 59 157341431 157341451 TCACCTTACTCTGTTCTTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000055855 ENSMUSG00000055855 ENSMUST00000069605 2 1 1 61 17 67366364 67366383 AATATGTCTGGAGAAAGGCA 58 67366401 67366425 CTGATAGGTATCTTACTGTATGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A230051N06Rik ENSMUSG00000056230 ENSMUST00000070225 3 1 1 107 17 56381670 56381688 CGAAGAGACTAGGCTTCAG 59 56381759 56381777 TCCTTCCCTGTACACTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cep70 ENSMUSG00000056267 ENSMUST00000093795 3 1 1 81 9 99177854 99178366 CATATACAAAGGCAGTTTGAGG 59 99178405 99178426 CTTTATAATTTGGTGAGGCACC 59 NA Mus musculus 50 Krtap7-1 ENSMUSG00000056706 ENSMUST00000056118 2 1 1 61 16 89508488 89508506 TGACTCGCTATTTCTGCTG 59 89508445 89508463 GAAGTTGGTTCCATAGCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mab21l2 ENSMUSG00000057777 ENSMUST00000077524 2 1 1 62 3 86351345 86351363 GAGTCTTCAACTTCGTGGA 59 86351301 86351319 CATCGCTTAGTTTGAGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mdn1 ENSMUSG00000058006 ENSMUST00000071642,ENSMUST00000108170 3 2 2 80 4 32857904 32857925 TTCTTCAGGGACTCATATTCTG 59 32857963 32858828 GCTACAGTTTCTAGAAACTGAG 58 NA Mus musculus 50 Snhg8 ENSMUSG00000058351 ENSMUST00000064032,ENSMUST00000049732,ENSMUST00000090205 3 3 3 61 14 31941889 31941907 CATCTACAGATTCCTGCCC 59 31941846 31941866 TAATCATGATCCACTCCATCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lep ENSMUSG00000059201 ENSMUST00000069789 1 1 1 99 6 29019073 29019092 GGATCAATGACATTTCACAC 57 29020881 29020899 TTGGACAAACTCAGAATGG 57 NA DesignNoJunction Mus musculus 50 Vpreb2 ENSMUSG00000059280 ENSMUST00000075371 1 1 1 202 16 17981148 17981167 AGTCGTATACAGATTTGGGA 57 17981332 17981350 AATTCTACGATCCAGCCTC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Olfr156 ENSMUSG00000059448 ENSMUST00000079465 1 1 1 60 4 43834041 43834059 CCATGTACTTCTTCCTGGG 59 43833999 43834018 ATCGAGGAGGTAGTATAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Prh1 ENSMUSG00000059934 ENSMUST00000074042 2 1 1 95 6 132519863 132519881 CTGGTGGTCCTGTTTACAG 59 132521629 132521648 CCTTTGATTTGGGATCTGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr105 ENSMUSG00000060137 ENSMUST00000113642,ENSMUST00000073218 1 2 2 60 17 37519610 37519628 AATGTGTTTGGGAATGGAG 57 37519650 37519670 GTGAGTAGAGTCTTGAATCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Maml3 ENSMUSG00000061143 ENSMUST00000082294 1 1 1 92 3 51494771 51496130 AACCAGTTTCAAGGTTCAC 58 51494697 51494715 ATTCTGTGCAATCAACCTC 58 NA Nonspecific Mus musculus 50 Olfr854 ENSMUSG00000061163 ENSMUST00000072419 3 1 1 60 9 19371433 19371452 ATATGTGGCTATTTGTCACC 57 19371392 19371411 GATACAGAAACAGGGTTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1148 ENSMUSG00000061875 ENSMUST00000077580 2 1 1 60 2 87674018 87674036 CTGGAACTGACAAACTCCT 59 87674060 87674078 AAGGGATTGAACATGGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700113O17Rik ENSMUSG00000062651 ENSMUST00000105001 2 1 1 76 2 17918459 17918477 AAGAAGACGGAAAGTGACC 59 17918401 17918419 CTCGTAGGAAACGATCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1110001A16Rik ENSMUSG00000062691 ENSMUST00000063817 2 1 1 87 17 79317735 79317753 TTAAAGGAGTGCTAGCAGC 59 79317804 79318405 TGTCTGAAATCTTGGCTGG 59 NA Mus musculus 50 Zfp512 ENSMUSG00000062761 ENSMUST00000076264 2 1 1 81 5 31779189 31779209 GTGTGAGAAAGAGTTTGTGTC 59 31779250 31782360 GTTCACAACAAACCAATCCTC 59 NA Mus musculus 50 Cyp26b1 ENSMUSG00000063415 ENSMUST00000077705 2 1 1 85 6 84525057 84525075 CAAGGAGGTCATGAGACTC 59 84524641 84525008 GGATCTGGAAACCATCCAG 59 NA Mus musculus 50 Jazf1 ENSMUSG00000063568 ENSMUST00000074541 1 1 1 82 6 52720363 52727538 GAGATACAAGAATGTGAATGGC 59 52720302 52720320 ATTTGAATGGTTTGCGGAC 59 NA Mus musculus 50 Gng8 ENSMUSG00000063594 ENSMUST00000078182 2 1 1 119 7 17477813 17477831 ACTGTGTATGGCATTGGAC 59 17480344 17480362 TGTTCACTTCCAGCTTCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Chchd1 ENSMUSG00000063787 ENSMUST00000071215 3 1 1 144 14 21522417 21522527 GAGAGGCAACCTGTATCAC 59 21523346 21523365 ATTGATCTCATCTTCCTGGC 59 NA DesignNoJunction Mus musculus 50 Chd4 ENSMUSG00000063870 ENSMUST00000112392,ENSMUST00000112390,ENSMUST00000056889 1 3 3 80 6 125071632 125071650 AAAGACTCCTACACCTTCC 58 125071694 125071962 TTTATCCCATCCTCAGCAG 58 NA Mus musculus 50 Hvcn1 ENSMUSG00000064267 ENSMUST00000072602,ENSMUST00000100747 1 2 2 86 5 122690258 122690278 CAGATCTTAAGGCTAAAGCAG 58 122690326 122690624 TTCTTGTTCCTTCTCGGAG 58 NA Mus musculus 50 Scn1a ENSMUSG00000064329 ENSMUST00000112366,ENSMUST00000112371,ENSMUST00000077489,ENSMUST00000094951 2 4 4 83 2 66165906 66166471 ATACCAACTGACATTGCGT 59 66165841 66165859 ATCAGGTAGAATGAGCCCA 59 NA Mus musculus 50 ENSMUSG00000064363 ENSMUSG00000064363 ENSMUST00000082414 3 1 1 60 MT 11183 11202 CCGTACTATAATCATGGCCC 59 11223 11243 TCATCATGTGGCTATAAGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1453 ENSMUSG00000067484 ENSMUST00000087773 1 1 1 60 19 13102711 13102734 GTTCCTCCTCATCTATATCATCAC 59 13102674 13102693 GAGAATCATCAAGATCAGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 I730030J21Rik ENSMUSG00000068153 ENSMUST00000089252 3 1 1 87 15 100561312 100562810 TCGATTCTCTTACCATCCAC 58 100561244 100561262 CAAGTTCGGATGCTTTCTG 59 NA InUTR Mus musculus 50 Macrod2 ENSMUSG00000068205 ENSMUST00000110067,ENSMUST00000110064,ENSMUST00000110063,ENSMUST00000078027 3 4 10 160 2 140221449 140226607 AGGAGAAAGAACGTTTGCT 59 140278331 140278349 TTTCTTCATCTGTGGTGCT 59 NA DesignNoJunction Mus musculus 50 V1ra6 ENSMUSG00000068232 ENSMUST00000089419 2 1 1 60 6 89794759 89794779 CATCTATGACACCATAGTCTC 57 89794719 89794740 GTAAGATGTTGGATCATTCAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Efcab1 ENSMUSG00000068617 ENSMUST00000090277,ENSMUST00000115779,ENSMUST00000115778 1 3 3 88 16 14917070 14917746 GGACAGAGTATTTCGAGGC 59 14917795 14917816 CTCGAAGAAACAGTGATAATCC 58 NA Mus musculus 50 Rap1a ENSMUSG00000068798 ENSMUST00000090678 1 1 1 95 3 105544312 105548831 CTACAGAAAGCAAGTCGAG 57 105542544 105542562 TACAAATCCCTCATTGCTG 57 NA Mus musculus 50 Ahnak ENSMUSG00000069833 ENSMUST00000092955,ENSMUST00000079602,ENSMUST00000043246,ENSMUST00000092956 3 4 5 110 19 9074255 9074600 CTGCAAAGATGGAGAAGGA 59 9074673 9074692 CAAAGACTCCATCATCCCTC 59 NA InUTR Mus musculus 50 Olfr658 ENSMUSG00000070421 ENSMUST00000106817,ENSMUST00000089296 2 2 2 67 7 111793380 111793398 TTCACATTTCTCACCAAGC 58 111793331 111793349 TGGTCACAGTAGGTATGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Art5 ENSMUSG00000070424 ENSMUST00000106940,ENSMUST00000106934,ENSMUST00000106935 2 3 7 134 7 109246755 109246773 CAACACCTTGTACTGGGAG 59 109245677 109245695 GTCTTTCCTGATTGCAGAG 58 NA DesignNoJunction Mus musculus 50 Fv1 ENSMUSG00000070583 ENSMUST00000094481 2 1 1 60 4 147244135 147244155 TGGTATTCTATTGAGGATGGG 58 147244176 147244195 AAAGCCACTCTATCATTCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Grid2 ENSMUSG00000071424 ENSMUST00000095852 2 1 1 80 6 63859074 63859095 TGAAGTCATCCTAAGAGTAGTC 58 63859134 63880910 CCACGGATATCATATTCACTG 58 NA Mus musculus 50 Stfa3 ENSMUSG00000071561 ENSMUST00000096089 1 1 1 284 16 36367665 36367684 GGAGGAGTTTACAGATACCT 57 36359652 36359670 CAACCATGACCTACATCCA 58 NA DesignNoJunction, InUTR Mus musculus 50 1810009A15Rik ENSMUSG00000071653 ENSMUST00000096251 2 1 1 221 19 8963646 8963664 GGTATTAAGCAGGGATCGG 59 8964913 8964931 CTAGTCCTGGTTGACTTGG 59 NA DesignNoJunction Mus musculus 50 OTTMUSG00000017637 ENSMUSG00000071708 ENSMUST00000112529,ENSMUST00000096351 3 2 2 83 X 153899252 153899901 GGGATGTTAATTTGGCAGAG 58 153899188 153899206 CATCTTTGCCAGTGTAGTC 58 NA Nonspecific Mus musculus 50 Rhox7 ENSMUSG00000071767 ENSMUST00000096454 2 1 1 84 X 35186262 35186280 GACTCAGTACCCAGATGTG 59 35187447 35188865 GTTAAACCTTATCTGCACCT 57 NA Nonspecific, DesignRelaxed Mus musculus 50 OTTMUSG00000018964 ENSMUSG00000072931 ENSMUST00000112804,ENSMUST00000101189 2 2 2 60 X 144450187 144459376 CCAGAAATTGACAGATCGT 57 144459397 144459418 GTTCCTGTACCCATAAATAGTC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000072980 ENSMUSG00000072980 ENSMUST00000110805 3 1 1 98 2 119437583 119438757 GATTGCAGAGCTGAAAGAG 58 119437503 119437522 TCTTGCTTAAACTGATGAGG 57 NA Mus musculus 50 EG331493 ENSMUSG00000073010 ENSMUST00000101296 2 1 2 81 X 103904165 103904425 GATTAAAGGAATCCTGCCC 57 103904469 103904488 ATTTGAACATCAGGTACCTG 57 NA InUTR Mus musculus 50 9530048O09Rik ENSMUSG00000073771 ENSMUST00000097915 1 1 2 133 4 116793449 116794824 GGTTGAACAGATTGTGGAG 58 116793334 116793352 ATTTGAAACGAAGGTCCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mc1r ENSMUSG00000074037 ENSMUST00000098324 2 1 1 60 8 125931940 125931960 TATCACCTACTACAAGCACAC 59 125931980 125932000 CATGGCTAGAAAGAAAGTGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 1700101G07Rik ENSMUSG00000074571 ENSMUST00000077067 2 1 1 60 2 169408408 169408426 TGCAGACATCAACAGTCTC 59 169408450 169408468 TGTAAATATGCAGGGTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 5530400B04Rik ENSMUSG00000074647 ENSMUST00000029143 1 1 1 81 2 155656341 155656681 CAGTTACAGCTTCACTTGG 58 155656278 155656296 AAAGTCTTCCACAATGTGG 57 NA Mus musculus 50 Ctla2b ENSMUSG00000074874 ENSMUST00000021884 2 1 1 119 13 60997689 60997707 CAGAAGACTCATGTGGGAG 59 60997494 60997606 TCTTCTGGAGTCAAGTCAC 58 NA Mus musculus 50 Olfr1213 ENSMUSG00000075111 ENSMUST00000099806 2 1 1 60 2 88813933 88813951 CTACATTGCAACAGTTGGG 59 88813891 88813910 TGCACGACTACATATGATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc58 ENSMUSG00000075229 ENSMUST00000099937 3 1 1 177 16 36085142 36085160 AACTGTATAGCCCAGACCT 59 36090037 36091929 CATTAAACACCTTCCAGCTC 58 NA Mus musculus 50 TRBV12-2 ENSMUSG00000076468 ENSMUST00000103269 1 1 1 135 6 41068929 41069076 CTCCTGGGAACAAGTTCAG 59 41069175 41069193 GAGTCTGTTGATACCAGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRBV31 ENSMUSG00000076499 ENSMUST00000103300 2 1 1 113 6 41507973 41508335 GTTCTTGGGTGTTAGTGCT 59 41507878 41507896 AGGTTAGGGCTTGATTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKC ENSMUSG00000076609 ENSMUST00000103410 1 1 1 60 6 70676653 70676671 AAGGACGAGTATGAACGAC 59 70676694 70676713 AAGTTGATGTCTTGTGAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV6D-7 ENSMUSG00000076792 ENSMUST00000103602 1 1 1 75 14 53627341 53627488 TCCTCATATTCACAAGGGC 59 53627527 53627545 AAGTCCTCTTCTGAGAGGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRAV15-1/DV6-1 ENSMUSG00000076841 ENSMUST00000103653 2 1 1 174 14 54179394 54179632 TCTCTGGATCTAATGTGGC 58 54179770 54179788 GGCATTTGTCGAATAAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 A2A899_MOUSE ENSMUSG00000078491 ENSMUST00000105667 3 1 1 109 4 150464292 150464310 ACAGCTCCATTCAGAACAC 59 150464383 150464703 CTCTTGTGTACAGTCTGGG 59 NA Mus musculus 50 1810010H24Rik ENSMUSG00000078607 ENSMUST00000106767 1 1 1 60 11 106889812 106889830 TGCATATACTAGCCCTGGA 59 106889854 106890899 CCGGGTTTAAATTCTGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mup1 ENSMUSG00000078674 ENSMUST00000098040 3 1 1 81 4 61333707 61334497 CCATACTGTAAGAGATGAAGAG 57 61333647 61333665 CGTCACAGAATATTCACCA 57 NA Nonspecific Mus musculus 50 Rad54b ENSMUSG00000078773 ENSMUST00000108306,ENSMUST00000043375,ENSMUST00000070755 2 3 3 86 4 11490581 11490602 GTAAGGAGATCACAAAGATGAG 58 11496992 11497010 TTGAACTGCATACACCTGG 59 NA DesignNoJunction Mus musculus 50 MGI:1889810 ENSMUSG00000078810 ENSMUST00000108590 3 1 1 83 7 4336458 4336477 TCTAGTGCTTGTGGTTACTG 59 4323246 4324820 CTGGAGGATTCTGTCACAG 59 NA Mus musculus 50 A2BG91_MOUSE ENSMUSG00000078877 ENSMUST00000108979 2 1 1 60 2 176592413 176592432 AGAACATACGATTGAAGACC 57 176592455 176593627 ACTTCTTTCATGCCTTCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 3100002L24Rik ENSMUSG00000078887 ENSMUST00000099026,ENSMUST00000109012,ENSMUST00000109011 1 3 3 80 2 175877422 175877441 ATCCTTCTCAGAAGAGTCTC 57 175877481 175877703 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 Ifi47 ENSMUSG00000078920 ENSMUST00000109202,ENSMUST00000046704 2 2 2 60 11 48909001 48909019 TAATCAGTAAGGCAGGAGG 58 48909043 48909061 AGGGCTTTGTGAATACCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Insl3 ENSMUSG00000079019 ENSMUST00000034261 1 1 1 236 8 74214089 74214107 TAGAGCAGAGACATCTCCT 58 74214307 74214325 CAATGACATAGCCAGGAGG 59 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Mus musculus 50 MGI:3034635 ENSMUSG00000079031 ENSMUST00000110149 3 1 1 194 12 89055037 89055055 CATCTCGCTGTCTTTACCT 59 89055212 89057480 GCAGTTAATGCATTGACCTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Eif1a ENSMUSG00000079034 ENSMUST00000110152 2 1 1 60 12 88858501 88858519 AATTGAACTTTGGGCACAG 58 88858543 88858561 AAGGTCACAAATGGAATGG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Gzmc ENSMUSG00000079186 ENSMUST00000015585 3 1 1 83 14 56852770 56852788 TGGGAAGAAGATGTTCTGC 59 56851661 56852723 GTCATTGAGCTTCCTTTGC 59 NA Mus musculus 50 A2AK42_MOUSE ENSMUSG00000079247 ENSMUST00000111730 3 1 2 101 2 83824865 83830677 CTGACCATTGAATGAACCTG 58 83830741 83830759 CTTCTGTTGTGACCAGAGG 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Tom1l2 ENSMUSG00000000538 ENSMUST00000000550 2 1 8 106 11 60052564 60055327 CAGAAATGAGAGGGAGAGG 58 60046424 60046442 AATGTCGTCCATGACAGAG 59 NA Mus musculus 50 Krit1 ENSMUSG00000000600 ENSMUST00000080085 3 1 2 83 5 3832152 3832171 AGCAATCATAAAGTCATCCC 57 3832216 3836786 GAGTAATGCCTTAGTTTCCA 57 NA Mus musculus 50 Gnb1l ENSMUSG00000000884 ENSMUST00000000904,ENSMUST00000100091,ENSMUST00000090086 3 3 5 113 16 18548187 18548205 TTCAGATTCTGGAGATGCC 59 18548282 18552475 GGAGACTGGAGTTAGTCTG 58 NA Mus musculus 50 Nr1h3 ENSMUSG00000002108 ENSMUST00000111356,ENSMUST00000111354,ENSMUST00000111355,ENSMUST00000002177,ENSMUST00000111358 2 5 5 129 2 91032889 91033781 TTCTCCTGATTCTGCAACG 59 91032778 91032796 CCCTATCCCTAAAGCAACC 59 NA Mus musculus 50 Homer3 ENSMUSG00000003573 ENSMUST00000087467 2 1 4 164 8 72809836 72809854 ATCAACAGCACTGTCACTC 59 72810215 72810233 CAAATGCATGCAAATGCAC 59 NA DesignNoJunction Mus musculus 50 Pkn2 ENSMUSG00000004591 ENSMUST00000043812,ENSMUST00000090108 2 2 2 81 3 142466691 142472451 AGATGAAGTAGACAGCCTG 58 142466628 142466646 AAGGTTCACTAGAAACGGG 59 NA Mus musculus 50 Nkg7 ENSMUSG00000004612 ENSMUST00000070518,ENSMUST00000004731 3 2 2 87 7 50693023 50693041 CTGGTCTCAACTGTCATGG 59 50693446 50693465 ACAAGGTTTCATACTCAGCC 59 NA DesignNoJunction Mus musculus 50 Arid3b ENSMUSG00000004661 ENSMUST00000004780,ENSMUST00000114165 2 2 4 130 9 57643916 57643934 AGATCAGAATCAACGGCAG 59 57640482 57642751 AAACAGCACACCTGTATAGG 59 NA Mus musculus 50 Prdx2 ENSMUSG00000005161 ENSMUST00000109734,ENSMUST00000005292,ENSMUST00000109733 3 3 3 111 8 87494234 87494343 GACTACAGAGGGAAGTACG 58 87494418 87494436 CTAGCTTTCGGAAGTCCTC 59 NA Mus musculus 50 Zfp287 ENSMUSG00000005267 ENSMUST00000101061 1 1 4 81 11 62536425 62538306 TAATCCAGGACGACAAACC 59 62536362 62536380 GGAACAACTCATGACTCCA 59 NA Mus musculus 50 Fcer2a ENSMUSG00000005540 ENSMUST00000005678 2 1 5 151 8 3690132 3691129 TGAATACTCAGGATACTGGGA 59 3689810 3689828 GATTCTTCTCCGTTTCCCA 59 NA Mus musculus 50 Fbln1 ENSMUSG00000006369 ENSMUST00000057410,ENSMUST00000109432 2 2 2 80 15 85071105 85071123 CTCCTACCAGTGCTATTGC 59 85071165 85072456 GCACACTCATCAATATCTTCG 59 NA Mus musculus 50 Ezh1 ENSMUSG00000006920 ENSMUST00000107285,ENSMUST00000092648,ENSMUST00000107284 1 3 4 85 11 101055856 101056210 ATTGTGGTGAGCTCATCTC 59 101055789 101055807 GAGGTTGAAGAGGAAGCTG 59 NA Mus musculus 50 Tle1 ENSMUSG00000008305 ENSMUST00000098010 3 1 10 108 4 71787449 71787468 ATACTCCTTCCACGTTACTG 58 71781313 71787378 CAAAGAGAAGATCTGCCGA 59 NA Mus musculus 50 Cd163 ENSMUSG00000008845 ENSMUST00000112541,ENSMUST00000032234 2 2 2 80 6 124276562 124276580 ATTGGTCCTCCTCATTGTC 58 124276624 124277931 TCTCCTCTTGAGGAAACTG 58 NA Mus musculus 50 Fpgs ENSMUSG00000009566 ENSMUST00000113253,ENSMUST00000028148 3 2 2 102 2 32547980 32547999 TTATTCATGTCACTGGGACC 59 32543546 32546719 TGAGGAGAGCTAAAGAAGC 58 NA Mus musculus 50 Spnb4 ENSMUSG00000011751 ENSMUST00000011895 1 1 4 81 7 28203025 28203043 AAGATTTGACCACAAGGTG 57 28202012 28202980 ATATCCGAAGTTGTCCTGG 58 NA Mus musculus 50 Dhdds ENSMUSG00000012117 ENSMUST00000012262,ENSMUST00000105887,ENSMUST00000105889,ENSMUST00000105885 3 4 5 91 4 133548486 133550085 GGAAGAACAGGAGAAGCTG 59 133548413 133548431 CAATCTTCTCCTGGAGGTC 59 NA Mus musculus 50 Pax5 ENSMUSG00000014030 ENSMUST00000014174,ENSMUST00000102932,ENSMUST00000107825 3 3 5 187 4 44658576 44658595 GTATTCAGGAGTCTCCAGTG 59 44622705 44658427 ATACTCTGTGGTCTGTTCTG 58 NA Mus musculus 50 Anapc1 ENSMUSG00000014355 ENSMUST00000014499,ENSMUST00000110333 3 2 3 80 2 128510391 128511569 GAAACAGAAGGAAAGCTGG 58 128510329 128510347 ACATAGAGCTCTTCATCGT 57 NA Mus musculus 50 Lage3 ENSMUSG00000015289 ENSMUST00000114152,ENSMUST00000015433 3 2 3 158 X 71598267 71598285 TAGTTCCAGATGTCGAACC 58 71597752 71597771 GTATGGTGTTCACCACTAGG 59 NA DesignNoJunction Mus musculus 50 2700038C09Rik ENSMUSG00000016344 ENSMUST00000016488 3 1 3 226 2 180923004 180923022 ACCTATCAGAATCTGCAGC 59 180923212 180923230 TGTTTCAAACATACCAGGG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Eya2 ENSMUSG00000017897 ENSMUST00000063422,ENSMUST00000103082,ENSMUST00000063433 3 3 4 159 2 165557082 165557103 AATCATTATCTTCCACTCCCTG 59 165580027 165587418 GATTTGGTCACAGTCCTCC 59 NA Mus musculus 50 Hnf4a ENSMUSG00000017950 ENSMUST00000109411,ENSMUST00000018094,ENSMUST00000051130 2 3 3 147 2 163378378 163383926 ATGAAGAAGGAAGCTGTCC 59 163384700 163384718 CATTGATCCCAGAGATGGG 59 NA Mus musculus 50 Tnfsf12 ENSMUSG00000018752 ENSMUST00000094070,ENSMUST00000018896 3 2 5 91 11 69497828 69497997 TACCTCCAAGGACTCTGAC 59 69497755 69497773 CTCGTACAATGTCTCCCTG 59 NA Nonspecific Mus musculus 50 Atp6v0a1 ENSMUSG00000019302 ENSMUST00000100436 3 1 4 118 11 100909732 100909750 GGAACTCTCAACTTTGGTG 58 100909832 100910330 TTCCTCTCAGTCTCTTCTG 57 NA Mus musculus 50 Tmem189 ENSMUSG00000019755 ENSMUST00000006587 3 1 1 245 2 167480177 167480195 CTCTGTTTCAGTCTCATCG 57 167471611 167471629 GATGAAGTCATGCCTTGTG 58 NA DesignNoJunction Mus musculus 50 Zbtb24 ENSMUSG00000019826 ENSMUST00000105508 3 1 2 144 10 41175569 41176346 TACCAATAAGGCCACTCAC 58 41184115 41184133 GAGTCAGAGAAGCATTTGC 58 NA Mus musculus 50 Rfx4 ENSMUSG00000020037 ENSMUST00000060397 3 1 3 81 10 84277432 84277450 CCTCTACATGCACTACCTG 59 84277494 84298046 CCTTATGATCTTCCCAAAGC 58 NA Mus musculus 50 Rab1 ENSMUSG00000020149 ENSMUST00000109601 1 1 4 88 11 20118839 20118857 CATCAGCACAATTGGTGTG 59 20118906 20124666 GGGAATCTGCAAATTCTATCTG 59 NA Nonspecific Mus musculus 50 Tcfe2a ENSMUSG00000020167 ENSMUST00000105344,ENSMUST00000105343,ENSMUST00000105342,ENSMUST00000105346,ENSMUST00000105345,ENSMUST00000020377,ENSMUST00000105341,ENSMUST00000020379,ENSMUST00000105340,ENSMUST00000105339 2 10 10 80 10 79876077 79877919 GACTCCTATAGTGGACTCG 57 79876015 79876033 TTCCTCATCCTCTTTCTCC 57 NA Mus musculus 50 Fbxw11 ENSMUSG00000020271 ENSMUST00000109366,ENSMUST00000082313,ENSMUST00000076383,ENSMUST00000093205 1 4 4 80 11 32620594 32620612 AAGCTGATTGAGAGGATGG 59 32620656 32622070 AAACAGGTACTGATCCCAG 58 NA Mus musculus 50 Fbxw11 ENSMUSG00000020271 ENSMUST00000093205 3 1 4 98 11 32580295 32611783 GTCTCCAGATCAGTAATGGA 58 32611843 32611862 AGTACTTAATGCACAAGTCC 57 NA Mus musculus 50 Ahsa2 ENSMUSG00000020288 ENSMUST00000020529,ENSMUST00000109539 1 2 2 80 11 23392294 23393286 CAAGACGGAATTTACAACAGG 59 23392234 23392254 TTCAGTTTCCTCTGAAGAGTC 59 NA Mus musculus 50 Mgat1 ENSMUSG00000020346 ENSMUST00000081794 3 1 3 215 11 49059079 49059098 TTGATGATCTTCAGGGAAGC 59 49074229 49074247 CACAAAGATGATAGCACCC 58 NA DesignNoJunction, InUTR Mus musculus 50 Butr1 ENSMUSG00000020490 ENSMUST00000108818 3 1 3 126 11 58733935 58733953 ACTTCTCAGTTTCAGCCAG 59 58734043 58740284 AATCCAGTGTCCTGTTCTG 59 NA Nonspecific Mus musculus 50 Elac2 ENSMUSG00000020549 ENSMUST00000108697 1 1 3 117 11 64805852 64805954 CTATAGTAAGGAAGGGTCCAC 58 64807744 64807762 AGTATTGCAGTCGAGTGTG 59 NA Mus musculus 50 Sh3yl1 ENSMUSG00000020669 ENSMUST00000110880 1 1 3 116 12 31607200 31611683 GATCATTCCTGAATGGTCTG 58 31624460 31624479 ACTGCTCTGTCATAATTCAG 57 NA Mus musculus 50 Rffl ENSMUSG00000020696 ENSMUST00000074515,ENSMUST00000071152,ENSMUST00000108173,ENSMUST00000108172,ENSMUST00000108171,ENSMUST00000093975,ENSMUST00000021036,ENSMUST00000103218,ENSMUST00000108169 1 9 9 98 11 82623578 82623596 TCAACTATAAGGGCTGCTG 59 82622027 82623516 CATTACCAGACACCAGGTG 59 NA Mus musculus 50 Stx8 ENSMUSG00000020903 ENSMUST00000021286,ENSMUST00000108675,ENSMUST00000021285 3 3 3 87 11 67783301 67783319 GATAGCCCAAGAAATCGCT 59 67783369 67786749 GATTGTCAAGGTAAGCTTCG 58 NA Mus musculus 50 Usp43 ENSMUSG00000020905 ENSMUST00000021288,ENSMUST00000108676 1 2 3 94 11 67690025 67693307 CATTACACAGCCTATTGCC 58 67689949 67689967 GTGTTGACCTCATCCTCTC 59 NA Mus musculus 50 Acly ENSMUSG00000020917 ENSMUST00000107389,ENSMUST00000007131,ENSMUST00000107385 3 3 5 87 11 100380476 100380941 AGGACAAGAAAGAAGTCCTG 59 100380408 100380426 GGGTTGATCTCAAGGTAGG 59 NA Mus musculus 50 Scfd1 ENSMUSG00000020952 ENSMUST00000110734 1 1 4 103 12 52485104 52485125 GGATGTTGAATTTCAATGCC 57 52488082 52488100 TCAGTTCCTTCACAGACAG 58 NA Mus musculus 50 Esr2 ENSMUSG00000021055 ENSMUST00000110421,ENSMUST00000101291,ENSMUST00000076634,ENSMUST00000110419 1 4 6 84 12 77224305 77234806 CTCAACTCCAGTATGTACCC 59 77224240 77224258 TCACTGCGTTCAATAGGTG 59 NA Mus musculus 50 Zfp36l1 ENSMUSG00000021127 ENSMUST00000021552 2 1 1 128 12 81211508 81211526 ATGCTCAACTACAGCACTC 59 81211398 81211416 GTTCTGATGGAACTTGGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Sfrs5 ENSMUSG00000021134 ENSMUST00000110354,ENSMUST00000110351,ENSMUST00000110352,ENSMUST00000110356 2 4 5 126 12 82048573 82048792 TGATAGACGAAATGCTCCA 58 82050111 82050129 ATCCGCAAAGGTTACTTCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Net1 ENSMUSG00000021215 ENSMUST00000091853 2 1 2 95 13 3888219 3907055 CCTTGATTTGAAGGAGCCA 59 3888142 3888160 ACTGCTCCATTTCTTACGG 59 NA Mus musculus 50 Arhgef3 ENSMUSG00000021895 ENSMUST00000049206 2 1 2 98 14 28078758 28175981 GTCTTGACATAAGTGAACCT 57 28176042 28176060 TTAATGGTGTGGTCTTCAC 57 NA Mus musculus 50 Wnt5a ENSMUSG00000021994 ENSMUST00000112274,ENSMUST00000063465,ENSMUST00000112272 1 3 3 149 14 29319300 29325029 GAAGCCCATTGGAATATTAAGC 59 29325138 29326341 TTCATACCTAGAGACCACCA 59 NA Mus musculus 50 Dpys ENSMUSG00000022304 ENSMUST00000022915,ENSMUST00000110306 3 2 2 81 15 39673515 39673533 TTTATACGTCGTGCATGTG 58 39659661 39673471 TCCATAGACCACATTTCCTG 59 NA Mus musculus 50 5730410E15Rik ENSMUSG00000022340 ENSMUST00000090057,ENSMUST00000110267 2 2 4 113 15 44550523 44577801 TTCTGCTCAGATGACACAG 59 44550428 44550446 AAAGTCTTCATCGCTTCCA 59 NA Mus musculus 50 Sept3 ENSMUSG00000022456 ENSMUST00000023095,ENSMUST00000116423 3 2 2 83 15 82113608 82114115 ATTGGGCATGTGATAGAGG 59 82114162 82114180 ATTGTTGATCTGGTCTCCA 58 NA Nonspecific Mus musculus 50 Kif21a ENSMUSG00000022629 ENSMUST00000109289 2 1 6 129 15 90774328 90783156 GAAGGAACATAAACAAGGCA 58 90774218 90774237 ATCATCCGTAGAATCCACAC 59 NA Mus musculus 50 Ncam2 ENSMUSG00000022762 ENSMUST00000067602 3 1 3 83 16 81616143 81621595 CAGCTTACCTGAAAGATGGA 59 81621640 81621659 TCCCATCTTCATGGTTAGTG 59 NA Mus musculus 50 Tulp2 ENSMUSG00000023467 ENSMUST00000085331 2 1 5 104 7 52771701 52771895 GATGGGAGTGTATACACTCG 59 52771962 52771980 GTCTTCCATGGTCACTTCC 59 NA Mus musculus 50 Sfi1 ENSMUSG00000023764 ENSMUST00000093406 1 1 7 80 11 3086109 3086130 CAGAAAGTTCCTGTATTTGTGG 59 3077507 3086071 AGGTTGTACAAGTAGTATCTGG 58 NA Mus musculus 50 Slc29a1 ENSMUSG00000023942 ENSMUST00000051574 1 1 3 84 17 45725325 45725952 AAGTAAAGGAGAGGAGCCA 59 45725259 45725277 AGACTGGTTTCTGTTGGTG 59 NA Mus musculus 50 Lpin2 ENSMUSG00000024052 ENSMUST00000112646,ENSMUST00000112649,ENSMUST00000053173,ENSMUST00000112647,ENSMUST00000024848 1 5 5 83 17 71578681 71578699 CTACAAGGAGCCTTCACTC 59 71578745 71579620 GGGTAGGTGGTTTCTAATGG 59 NA Mus musculus 50 Epas1 ENSMUSG00000024140 ENSMUST00000024954,ENSMUST00000112273 1 2 2 80 17 87209119 87217702 TGTGACGACAGAATCTTGG 59 87217745 87217764 GGCATGGTAGAACTCATAGG 59 NA Mus musculus 50 Fkbp5 ENSMUSG00000024222 ENSMUST00000079413,ENSMUST00000114792,ENSMUST00000062167 3 3 3 82 17 28566213 28566231 GAATATGCTTATGGCTCGG 58 28565395 28566168 AAATCAAGGAGCTCAATCTC 57 NA Mus musculus 50 4921528I01Rik ENSMUSG00000024306 ENSMUST00000025160 2 1 2 83 18 21970077 22003403 TATTAGCTGTGCAGGAGGA 59 21970012 21970032 CTCCACATGAACTATTTGGGA 59 NA Mus musculus 50 Rcor2 ENSMUSG00000024968 ENSMUST00000025920,ENSMUST00000113369,ENSMUST00000066646 2 3 3 80 19 7345084 7345193 TAACATTGAGCAGGCACTC 59 7345237 7345255 GTGAAGTTGGCTAGGTCAG 59 NA Mus musculus 50 Wdr45l ENSMUSG00000025173 ENSMUST00000026173,ENSMUST00000106109 3 2 3 104 11 121189772 121190120 CAATGCAGTCATTGCTATCTG 59 121189688 121189706 GTCATCTCCAGGAACTGTG 59 NA Mus musculus 50 1810014F10Rik ENSMUSG00000025466 ENSMUST00000026539 3 1 1 64 7 147287013 147287031 ATGGAAGCGTTATGAATCC 57 147285830 147285848 TCTCTAGCTTCATCAGGGT 59 NA DesignNoJunction Mus musculus 50 Mupcdh ENSMUSG00000025497 ENSMUST00000106021,ENSMUST00000080654 2 2 2 80 7 148460389 148460409 CCTGGATATCAATGACAATGC 59 148460150 148460348 GTATTCACTTTGGTGTCCTC 58 NA Mus musculus 50 2010106E10Rik ENSMUSG00000025528 ENSMUST00000026602 3 1 2 86 X 109628823 109628842 CGACCTCAACATAATTCTGC 58 109628889 109669876 TGATAAGCTCCATGGATTCTC 59 NA Mus musculus 50 Sntg1 ENSMUSG00000025909 ENSMUST00000115488,ENSMUST00000027042 2 2 3 91 1 8668057 8669167 TAAGGAGCAAAGAGCAGAG 58 8667896 8667914 CATGTCTGCATTTCCTCAC 58 NA Mus musculus 50 Als2cr2 ENSMUSG00000026027 ENSMUST00000114296,ENSMUST00000027185 1 2 2 80 1 59042222 59045357 AGTGGAGATAGGAAGAGGG 59 59045401 59045419 ACAGTTACCAGTGTTCCTG 59 NA Mus musculus 50 Prkcq ENSMUSG00000026778 ENSMUST00000114853,ENSMUST00000102970,ENSMUST00000028118 3 3 3 85 2 11154280 11154298 TCATCTCAGAAACAACCGT 58 11154344 11157653 CAGCTCTAACCATATTTCTGTC 58 NA Mus musculus 50 Dnm1 ENSMUSG00000026825 ENSMUST00000113350,ENSMUST00000113352,ENSMUST00000091089,ENSMUST00000113365,ENSMUST00000035664,ENSMUST00000002626 3 6 9 81 2 32190337 32191310 TATCCATGGCATCAGAACG 59 32190274 32190292 TCGAATCTTCTTCACCTGC 59 NA Mus musculus 50 Itgb6 ENSMUSG00000026971 ENSMUST00000035298 2 1 4 85 2 60507355 60511468 CACGTCCAAGAATTTCACC 59 60507288 60507306 GTAGTTGACATCCTTTGGC 58 NA Mus musculus 50 March7 ENSMUSG00000026977 ENSMUST00000102748,ENSMUST00000102747 2 2 3 88 2 60081700 60081719 TACAATTGAACCAAGCACTC 58 60083311 60085958 CATCCTCTGAAGTTTCGAG 57 NA Mus musculus 50 Cybrd1 ENSMUSG00000027015 ENSMUST00000028403,ENSMUST00000112154 3 2 2 86 2 70975691 70976407 TCTTTGTCCTGAAACACCC 59 70976456 70976475 CAAACACCAGAATCAGAAGG 58 NA Mus musculus 50 P2rx3 ENSMUSG00000027071 ENSMUST00000111616 1 1 3 97 2 84865077 84865096 TCCTCAGTAGTAACAAAGGT 57 84864317 84865017 TACTTCTCCTCATTCTGGG 57 NA Mus musculus 50 Caprin1 ENSMUSG00000027184 ENSMUST00000028607,ENSMUST00000111147 3 2 3 82 2 103609056 103609606 CCAATGGATTTAGAGGAGGA 58 103608993 103609013 GAACTGAGACTGTGAATAACC 58 NA Mus musculus 50 Necab3 ENSMUSG00000027489 ENSMUST00000000895,ENSMUST00000109716 1 2 3 92 2 154381379 154381398 AGAATTACTTTGCTGATGGG 57 154380648 154381327 CTGTCTCTAAATTGTCAGTGAG 58 NA Mus musculus 50 Pitx2 ENSMUSG00000028023 ENSMUST00000029657 2 1 3 103 3 128907488 128918568 CGCCAATGAGAAAGATAAGG 58 128918633 128918652 TAGTGAAATGAGTCCTCTGC 59 NA Mus musculus 50 Sdcbp ENSMUSG00000028249 ENSMUST00000029912,ENSMUST00000103008,ENSMUST00000108371,ENSMUST00000108374 3 4 4 85 4 6306120 6306138 CTGCTTATTCTGCCAATCC 58 6306185 6308147 AGGATACAGATTTCCATCTGG 58 NA Mus musculus 50 Mpdz ENSMUSG00000028402 ENSMUST00000102830,ENSMUST00000070461 3 2 4 86 4 80959496 80963509 AACAGACCAAGGAAATCCC 59 80959428 80959446 GTCTGCAAATGGGTTAGTG 58 NA Nonspecific Mus musculus 50 Cyp2j13 ENSMUSG00000028571 ENSMUST00000030305,ENSMUST00000097973,ENSMUST00000097972 1 3 4 85 4 95734932 95734951 ATGACAGTCAGTTTCAGGAG 59 95728758 95734887 GTTGTAGAGATGGACCATTAGG 59 NA Mus musculus 50 Scp2 ENSMUSG00000028603 ENSMUST00000106699,ENSMUST00000030340 2 2 4 111 4 107784842 107784862 AGAGACTATCCTGATATGGCA 59 107777772 107780233 TGGAATCACCATACACATAGC 59 NA Mus musculus 50 Bai2 ENSMUSG00000028782 ENSMUST00000106017,ENSMUST00000106015,ENSMUST00000106012,ENSMUST00000030571,ENSMUST00000097868,ENSMUST00000106018 2 6 6 81 4 129698485 129698811 ACTTGGACTTTGAGAAGGT 58 129698856 129698874 AAAGTGTGGAACTTCTGGT 58 NA Mus musculus 50 Eya3 ENSMUSG00000028886 ENSMUST00000081726,ENSMUST00000105928,ENSMUST00000105927,ENSMUST00000105926,ENSMUST00000079157 1 5 6 96 4 132217851 132223086 AAGTCAAGTAAACAACCCAG 57 132223144 132226117 GGTGCATGTCATAATTTCCT 58 NA Mus musculus 50 Acox3 ENSMUSG00000029098 ENSMUST00000114237,ENSMUST00000068947,ENSMUST00000114235,ENSMUST00000068563,ENSMUST00000114238 3 5 5 81 5 35937037 35940971 CTGGATAATGGATTCGCCA 59 35941015 35941034 CAGAGGTGATATTCCCAGTC 59 NA Mus musculus 50 Add1 ENSMUSG00000029106 ENSMUST00000001108,ENSMUST00000052836 2 2 5 81 5 34959542 34962002 ATTACCAACTGCTTGTGGA 59 34962046 34962065 TGTTCAATGGAACAAACAGG 58 NA Mus musculus 50 Nos1 ENSMUSG00000029361 ENSMUST00000111939,ENSMUST00000102557 2 2 4 135 5 118364439 118365561 AAGAGGAGAGGAAGTACCC 59 118369407 118369425 TTGAATCGGACCTTGTAGC 59 NA Mus musculus 50 Cxcl9 ENSMUSG00000029417 ENSMUST00000113093,ENSMUST00000031365 3 2 2 76 5 92755809 92755827 AAGACCTCAAACAGTTTGC 58 92754150 92754169 TTGATCTCCGTTCTTCAGTG 59 NA DesignNoJunction Mus musculus 50 Ncor2 ENSMUSG00000029478 ENSMUST00000111398,ENSMUST00000111402,ENSMUST00000111401,ENSMUST00000111393,ENSMUST00000086083,ENSMUST00000055256 3 6 8 153 5 125583062 125586579 ATGAGAACCGGAAGAAAGC 59 125572058 125572077 TACAAGATCAGCTTCTTCCG 59 NA Mus musculus 50 Pus1 ENSMUSG00000029507 ENSMUST00000031481,ENSMUST00000112426,ENSMUST00000086643,ENSMUST00000031483,ENSMUST00000100906 3 5 5 88 5 111204616 111204634 GGTATCCCTAAAGGTGTGG 59 111204224 111204564 TCTTCAATCCCAGAATCCG 59 NA Mus musculus 50 Limk1 ENSMUSG00000029674 ENSMUST00000015137,ENSMUST00000111233 1 2 3 92 5 135138027 135140067 CATCAAGAACATGGACAGC 58 135137709 135137727 TTCATCGAATGGAGGTAGG 58 NA Mus musculus 50 Zkscan1 ENSMUSG00000029729 ENSMUST00000066617,ENSMUST00000019660,ENSMUST00000110963,ENSMUST00000110962 3 4 4 60 5 138535331 138535349 AAGCATTCATCTAGGAAGC 57 138541823 138541841 CATTCCCATTCCTGTTCTC 57 NA DesignNoJunction Mus musculus 50 1700034O15Rik ENSMUSG00000029867 ENSMUST00000031900 1 1 1 60 6 41635228 41635249 GAGTATGAAGAACACTTTGAGG 58 41635270 41635288 CCATATCTATCTCCTGCCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tbxas1 ENSMUSG00000029925 ENSMUST00000003017 2 1 2 80 6 38951304 38951322 CAGAAGATGGGAGGAAGTC 59 38951365 38967907 CTGATGAGAGGTGTCATCTC 59 NA Mus musculus 50 Gsg1 ENSMUSG00000030206 ENSMUST00000111911,ENSMUST00000111910,ENSMUST00000087729 3 3 3 96 6 135194112 135194130 GCTATCCTGTGAGGAAACC 59 135192175 135192193 CAGTAGTCCTTTCTCACCT 57 NA DesignNoJunction Mus musculus 50 Me3 ENSMUSG00000030621 ENSMUST00000032856,ENSMUST00000032853 1 2 2 94 7 96996454 96996472 TGAGAAGGAGATGTTTGCC 59 96996530 96997126 CAGCGACACCTATAATTGC 58 NA Nonspecific Mus musculus 50 Plekhb1 ENSMUSG00000030701 ENSMUST00000107046,ENSMUST00000079176,ENSMUST00000107047,ENSMUST00000107045,ENSMUST00000116288,ENSMUST00000116287,ENSMUST00000107044 3 7 7 190 7 107802200 107803126 GATGATGCCATAGCATGGA 59 107794149 107794169 TCATAGTAGTCCTGATACGGG 59 NA Mus musculus 50 Plekhb1 ENSMUSG00000030701 ENSMUST00000107046,ENSMUST00000079176,ENSMUST00000107047,ENSMUST00000107045,ENSMUST00000116288,ENSMUST00000116287,ENSMUST00000107044 1 7 7 151 7 107803214 107803776 CCAAGAGTGTCAGGATGTG 59 107802173 107802191 TGGAATTTGCCTCCATCAG 59 NA Mus musculus 50 Morc4 ENSMUSG00000031434 ENSMUST00000087401,ENSMUST00000033811 1 2 4 87 X 136370523 136371038 CAAGGCTAAGCAACAAGTC 59 136369101 136369121 CTTTGGTGGATTACTGAAGAC 58 NA Mus musculus 50 Ank1 ENSMUSG00000031543 ENSMUST00000110688,ENSMUST00000084037,ENSMUST00000110685 1 3 6 175 8 24220190 24221838 CTGAAGATGAAGGTGACGA 59 24222330 24222348 TTCAGATCGGATCACAACG 59 NA Mus musculus 50 Adam5 ENSMUSG00000031554 ENSMUST00000050300 2 1 2 82 8 25854587 25854606 GAAAGAAGTGAAAGCGACAG 59 25837894 25852579 GTAGATGAGCTTCCTCCAC 59 NA Mus musculus 50 Wrn ENSMUSG00000031583 ENSMUST00000033991 1 1 2 133 8 34416186 34435008 CTGTGGTCCTACAAAGTGG 59 34405509 34405527 TAATGTCTTCCCGGATGGA 59 NA Mus musculus 50 Usp28 ENSMUSG00000032267 ENSMUST00000047349 3 1 2 81 9 48843996 48844014 TATCATGAAGGTGGCTCAG 58 48844057 48845293 TTCATGCCACCTCTTATACTC 59 NA Mus musculus 50 Rcn2 ENSMUSG00000032320 ENSMUST00000114276,ENSMUST00000034871 2 2 2 87 9 55900749 55900767 TAACCAGGATTCAGGTCCT 59 55900816 55903974 GACGAACTCCGTCATATAGTC 59 NA Mus musculus 50 Abhd10 ENSMUSG00000033157 ENSMUST00000036411,ENSMUST00000066983 1 2 2 92 16 45737696 45737714 AACTTAGCAGAGTGCACAG 59 45737129 45737640 GGATCCAACCAGTATCTGC 59 NA Mus musculus 50 Jmjd2a ENSMUSG00000033326 ENSMUST00000097911,ENSMUST00000106406,ENSMUST00000106403,ENSMUST00000050288 1 4 4 84 4 117842633 117848168 ATAGCGACAAGTACTGCAC 59 117842567 117842585 GGAGGATTGAATGTGAGGT 58 NA Mus musculus 50 Myo6 ENSMUSG00000033577 ENSMUST00000098514 3 1 6 87 9 80099603 80099621 CGCTAACAAAGAAACGGAC 59 80102702 80102724 TCTAATAGAGGATCCTTCGGA 58 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111698,ENSMUST00000111690,ENSMUST00000099941,ENSMUST00000111693,ENSMUST00000111692,ENSMUST00000111688,ENSMUST00000111686,ENSMUST00000111691,ENSMUST00000111697,ENSMUST00000067232,ENSMUST00000066177,ENSMUST00000036811 1 12 23 81 2 84443860 84443878 AGACCACAACAGAACACTG 59 84443052 84443815 AATCTTCTGCATCAAGGGT 58 NA Nonspecific Mus musculus 50 Chst11 ENSMUSG00000034612 ENSMUST00000040110 1 1 1 123 10 82448709 82448727 CAAAGTATGTTGCACCCAG 59 82653690 82653708 CAGTGTTGGATAGCTCCAG 59 NA DesignNoJunction Mus musculus 50 Ssh3 ENSMUSG00000034616 ENSMUST00000113852 1 1 2 115 19 4265893 4265913 ACTTACTACCAGGAGAAACTC 58 4265704 4265816 CTGGTAGTGATCTGTCCAG 58 NA Mus musculus 50 Mid1 ENSMUSG00000035299 ENSMUST00000112104,ENSMUST00000112107,ENSMUST00000112108,ENSMUST00000036753,ENSMUST00000112105,ENSMUST00000078947 3 6 7 159 X 166404083 166414865 ATGTTGAAGTCAATGCATCC 58 166419841 166419860 TTACAGTTTGCAATCTGCTG 59 NA Mus musculus 50 Shq1 ENSMUSG00000035378 ENSMUST00000113312 2 1 2 99 6 100561839 100580883 CAACTAGGTAAGAGTGCAG 57 100561758 100561779 CTGAGATGTAGAGATCATTCAG 57 NA Mus musculus 50 Abca17 ENSMUSG00000035435 ENSMUST00000039324,ENSMUST00000115381 1 2 2 80 17 24472595 24483093 CTTTGAAGTTCTAGGCTTTCC 58 24472535 24472556 ACCAGTATGTAGAAAGACTTGG 59 NA Mus musculus 50 D4Wsu132e ENSMUSG00000035649 ENSMUST00000107824,ENSMUST00000067521 3 2 4 81 4 44921344 44938850 CAGTATCACCTAACGACCA 58 44938894 44938913 TGTAGCAATACACTAACGCT 59 NA Mus musculus 50 Rnf38 ENSMUSG00000035696 ENSMUST00000045793,ENSMUST00000102934,ENSMUST00000098098,ENSMUST00000107836 2 4 4 84 4 44150479 44150497 CGTAGTAGATACCGATCCC 58 44147833 44150431 CTGGAAGCATTGATAGCAC 58 NA Mus musculus 50 Pim3 ENSMUSG00000035828 ENSMUST00000042818 2 1 1 79 15 88694868 88694886 CAGGATGAGGAGATCTTGC 59 88695011 88695029 CACCACTCAATAAGCTGCT 59 NA DesignNoJunction Mus musculus 50 Qsox2 ENSMUSG00000036327 ENSMUST00000116561,ENSMUST00000036187 1 2 3 120 2 26080762 26081763 TTAAAGGACCTGACAGGGA 59 26080443 26080678 TCACTGGACTGAATAGGGT 59 NA Mus musculus 50 Cab39 ENSMUSG00000036707 ENSMUST00000113360,ENSMUST00000113363,ENSMUST00000097666,ENSMUST00000082149 2 4 4 81 1 87744924 87744944 CTCAAGCTAATGATGAACCTC 58 87744987 87745617 CCACAAACACCTTGAACAC 59 NA Mus musculus 50 Tmem149 ENSMUSG00000036826 ENSMUST00000108161,ENSMUST00000043850 1 2 2 115 7 31351942 31352166 AGCAGTGTAGAAAGAAGCC 59 31352245 31352263 CTCATTCTTGGTTGTCTGC 58 NA Mus musculus 50 Zscan21 ENSMUSG00000037017 ENSMUST00000110961,ENSMUST00000110960,ENSMUST00000080732,ENSMUST00000062350,ENSMUST00000110959 1 5 5 76 5 138567850 138567868 ACTCAGGATCCAAGAAAGC 59 138574300 138574318 GAACTTCTGTGCTCATCTG 58 NA DesignNoJunction Mus musculus 50 1810054D07Rik ENSMUSG00000038172 ENSMUST00000102823,ENSMUST00000048274 1 2 3 93 4 82887616 82887634 ATGTGTTCTTGAAAGCTGC 58 82886090 82887559 TCCACCTGTCTAAACAGAG 58 NA Mus musculus 50 Smurf1 ENSMUSG00000038780 ENSMUST00000085684,ENSMUST00000100461 2 2 3 184 5 145657424 145657442 GAAATCCTGAGGTTCGAGG 59 145654161 145655346 CACACTGTTAAGGTCTCTGG 59 NA Mus musculus 50 Ttc16 ENSMUSG00000039021 ENSMUST00000066478 3 1 2 89 2 32618513 32620420 CTTTAGCATTGTGAGCATCAG 59 32618444 32618463 GAGGATTCTATAGCCGTGTG 59 NA Mus musculus 50 Tbcd ENSMUSG00000039230 ENSMUST00000103013,ENSMUST00000036990 3 2 3 100 11 121358363 121358381 TAAGAGTGACCAGAAGCTG 58 121358445 121360361 CCAGTAGCTGCTCTATCAC 59 NA InUTR Mus musculus 50 Cacna2d1 ENSMUSG00000040118 ENSMUST00000039370 2 1 3 112 5 15825105 15825123 TCAAGAGATTGACACCACG 59 15825970 15828368 TACACCAATAGGCTTTGGC 59 NA Mus musculus 50 Btnl9 ENSMUSG00000040283 ENSMUST00000066531 1 1 2 80 11 48989308 48989326 TGAAGATGTAACTGGCCAC 59 48989189 48989264 AGGAACACATCACTGAAGC 59 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000075269,ENSMUST00000111371 2 2 17 129 2 91007762 91007780 GACAGTGAGAACTCTCAGG 59 91007234 91007669 TAGATTTGCAAATGCCTGC 59 NA Mus musculus 50 Lat2 ENSMUSG00000040751 ENSMUST00000036362 2 1 2 115 5 135081820 135081923 CTACAAAGGAAGTAACCAGGA 59 135079330 135079348 CGTAGGAGTTGGAATCGTC 59 NA Mus musculus 50 Yeats2 ENSMUSG00000041215 ENSMUST00000090052,ENSMUST00000115560 3 2 3 82 16 20228829 20229574 GGACATGATCTTAAAGGCCA 59 20229619 20229637 GAGATGCTGTCTGGTATCC 59 NA Mus musculus 50 Ssh1 ENSMUSG00000042121 ENSMUST00000077689,ENSMUST00000112298 3 2 2 80 5 114407440 114407459 CCTCATTAAAGCCAAACTCC 58 114405842 114407397 AGCTCATTTCGGATTTCCT 58 NA Nonspecific Mus musculus 50 Osbpl6 ENSMUSG00000042359 ENSMUST00000111929,ENSMUST00000077972,ENSMUST00000090784,ENSMUST00000111930 1 4 5 80 2 76398309 76402851 GCTACAACAGTTCCTTTCAG 58 76402894 76402912 CTCAATGTCTGCACAAAGG 59 NA Mus musculus 50 Synpo ENSMUSG00000043079 ENSMUST00000097566,ENSMUST00000031639,ENSMUST00000115318 3 3 3 60 18 60762271 60762290 CTTCATCCTGGAAGTACACC 59 60762230 60762248 GGACTTAAGGATGCCACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 3110050N22Rik ENSMUSG00000043542 ENSMUST00000051064,ENSMUST00000108389,ENSMUST00000099249 3 3 3 81 3 7528118 7528591 AAACAATTGTAGGTGTGCC 58 7528635 7528654 GAAGGAGATAAGGTCTGAGG 58 NA Mus musculus 50 Bclp2 ENSMUSG00000043873 ENSMUST00000106751 1 1 3 80 3 105831682 105831700 AAGGTTACCATGAGAAGCA 58 105827848 105831638 TTTCAGCTGTACGTTTCTG 57 NA Mus musculus 50 BC037703 ENSMUSG00000044313 ENSMUST00000061831 3 1 1 62 3 101638926 101638944 AGACTTAGACCATTGCCTG 58 101630760 101630779 ATGGTCTGAGAAATCTGCTG 59 NA DesignNoJunction Mus musculus 50 Sh2d5 ENSMUSG00000045349 ENSMUST00000105824,ENSMUST00000062126,ENSMUST00000105823,ENSMUST00000105822,ENSMUST00000116271 2 5 5 80 4 137812808 137812827 CTGTCACAGAATGTTCATGC 59 137812870 137813038 CAGCTCCTTCCCATTACTG 59 NA Mus musculus 50 BC107364 ENSMUSG00000046317 ENSMUST00000093126,ENSMUST00000098841,ENSMUST00000059728 1 3 3 82 3 96244776 96245974 TACTCGCCTGTCTAAACAG 58 96244712 96244730 CTTTGTTTGGGTCAAGGAC 58 NA Mus musculus 50 Q9CXK9-2 ENSMUSG00000048271 ENSMUST00000114884,ENSMUST00000030920 3 2 2 83 5 28657659 28657677 TTTGACCAGTTTGACAAGC 58 28657724 28662374 ATCTTCCAGTTCACTGTCC 58 NA Nonspecific Mus musculus 50 Q9CXK9-2 ENSMUSG00000048271 ENSMUST00000114884 3 1 2 86 5 28679171 28684822 CCAGAAACTTTGGAACTTTCTG 59 28684869 28684887 ATAGCGTCCCTGTTTATGC 59 NA Mus musculus 50 Scrt1 ENSMUSG00000048385 ENSMUST00000096365 2 1 1 82 15 76352084 76352103 ACTTGACACATTCTCTTCGG 59 76352021 76352039 CTTTATCTTGCAGTCGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tprg ENSMUSG00000048399 ENSMUST00000056087 3 1 1 80 16 25328433 25357038 CTGACAGAGATTGATCACTG 57 25357080 25357099 GTATTTGCAGATCAAGAGGG 58 NA Mus musculus 50 Sp8 ENSMUSG00000048562 ENSMUST00000095338,ENSMUST00000063918 1 2 2 62 12 120086900 120086918 TGTAATAAGATCGGCAGCC 59 120086944 120086962 GAAGGAAGAAGAGCTGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 5930416I19Rik ENSMUSG00000048668 ENSMUST00000112152,ENSMUST00000057421,ENSMUST00000112151 1 3 3 104 6 128309165 128309183 ATTACCCACACTGTTCAGG 59 128308167 128308185 TATCAGAAACCGGCTTTCC 59 NA DesignNoJunction Mus musculus 50 Zfp219 ENSMUSG00000049295 ENSMUST00000067549,ENSMUST00000111621 1 2 2 247 14 52629656 52629674 AACCAAAGAATGTGAAGGG 57 52629120 52629138 ATGGAATTGAATCGGAAGC 58 NA DesignNoJunction, InUTR Mus musculus 50 Clip1 ENSMUSG00000049550 ENSMUST00000111552 1 1 5 135 5 124091882 124096101 GACAGGACTACATGTCCTG 59 124090542 124090560 GAACTGAAGGTCCTCAACC 59 NA Mus musculus 50 Sept6 ENSMUSG00000050379 ENSMUST00000115241,ENSMUST00000060474,ENSMUST00000053456,ENSMUST00000115239,ENSMUST00000115232 1 5 5 80 X 34466901 34470103 AACCATTCAGTTTGCAGGA 59 34466839 34466860 TCATCTCCTCTTCTTTCTTCTG 59 NA Nonspecific Mus musculus 50 Samd7 ENSMUSG00000051860 ENSMUST00000108262,ENSMUST00000063395 1 2 2 80 3 30661106 30661124 ACAGAACAGCATCTTCGAG 59 30661167 30664183 CACATGCTGAGATACCTGAG 59 NA Mus musculus 50 MGI:96020 ENSMUSG00000052305 ENSMUST00000023934 2 1 1 180 7 110975963 110975981 TGGATCCTGAGAACTTCAG 58 110975147 110975165 CATTGTTCACAGGCAAGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Bmpr1b ENSMUSG00000052430 ENSMUST00000029948,ENSMUST00000106232,ENSMUST00000098568,ENSMUST00000106230 1 4 4 80 3 141505972 141508053 TGTGTTTCTGGAGGTATAGTG 59 141505912 141505932 CATGTCCTCATAAGAAGGGTC 59 NA Mus musculus 50 Pcdh15 ENSMUSG00000052613 ENSMUST00000105430,ENSMUST00000105428,ENSMUST00000105427,ENSMUST00000105426,ENSMUST00000105425 3 5 10 145 10 74087167 74089439 CAGTTTAAAGTACGCCAGG 58 74089548 74089566 TCATAGAGATGTGCTCCTG 58 NA Mus musculus 50 Senp7 ENSMUSG00000052917 ENSMUST00000089360 1 1 4 92 16 56082514 56097464 TACAGAAGTGGACAAGAAGC 59 56097518 56097537 GTAATCCCTTAGGAGGACAC 58 NA Mus musculus 50 Mapk14 ENSMUSG00000053436 ENSMUST00000114758,ENSMUST00000114757 2 2 6 110 17 28865899 28865917 ACGTTGTTTCCTGGTACAG 59 28874026 28877697 CTTGGCATCAGACTCTGAG 59 NA Mus musculus 50 Tgm5 ENSMUSG00000053675 ENSMUST00000102489,ENSMUST00000028721 2 2 2 80 2 120900886 120900905 CGATTATGGCTTCATCTACC 57 120897339 120900844 ATATTCTCTTCAAACTGCCC 57 NA Mus musculus 50 Gpr112 ENSMUSG00000053852 ENSMUST00000114762 3 1 3 87 X 54172200 54174607 CCAAAGAGTCTACAGTTTCCT 59 54174655 54174674 ATAACAGTGGTAACGAGGAC 59 NA Mus musculus 50 Pkp3 ENSMUSG00000054065 ENSMUST00000106039,ENSMUST00000066873 2 2 2 153 7 148273684 148273702 TTCTACAATGCTACTGGCT 58 148274292 148274389 TTTCCACACTCTTGTCCTC 59 NA Mus musculus 50 Ceacam2 ENSMUSG00000054385 ENSMUST00000044547 3 1 3 108 7 26323665 26323683 GTCACCATGAAGGATACGG 59 26315757 26323596 TGGACTTTAGTAATAGGGTGTG 59 NA Mus musculus 50 Set ENSMUSG00000054766 ENSMUST00000102866,ENSMUST00000067996 3 2 2 80 2 29924610 29924852 AACCATCCACAAGTGTCTG 59 29924895 29924914 TTCTGTCACTTCAACTCTGG 59 NA Nonspecific Mus musculus 50 Mpz ENSMUSG00000056569 ENSMUST00000070758,ENSMUST00000111334 3 2 2 118 1 173088648 173088891 ATGCCATTTCGATCTTCCA 59 173088973 173088991 TATGACAATGGAGCCATCC 59 NA Mus musculus 50 Npm1 ENSMUSG00000057113 ENSMUST00000075641,ENSMUST00000093201 2 2 4 80 11 33054038 33054056 GTTCTCTTCCCAAAGTGGA 59 33052843 33053994 CTTGAATAGCCTCCTGGTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Mpp7 ENSMUSG00000057440 ENSMUST00000115869 2 1 2 80 18 7355065 7355083 CAAGTATAGACTCGGTTCG 57 7353283 7355021 AATGCTTCACTGTATGAGG 57 NA Mus musculus 50 Zbtb8os ENSMUSG00000057572 ENSMUST00000048467,ENSMUST00000106047 1 2 2 128 4 129019044 129019064 GCTGATGAGTACTTCATACCC 59 129021488 129024062 CTTGACTTCTGTTCCCTGAG 59 NA Nonspecific Mus musculus 50 Map2k5 ENSMUSG00000058444 ENSMUST00000034920,ENSMUST00000113945,ENSMUST00000113944,ENSMUST00000113943 1 4 4 80 9 63191253 63205810 TGCTGTCCTACTATTATTCCAC 59 63191194 63191213 CTCTTGGAAATATCTGCAGC 58 NA Mus musculus 50 Chpt1 ENSMUSG00000060002 ENSMUST00000047619 2 1 3 110 10 87948744 87951134 TTTGGAAGATGGAGAACTCTC 59 87948654 87948674 GAGCTGATTTAAAGTTCCGAG 59 NA Mus musculus 50 Nrg2 ENSMUSG00000060275 ENSMUST00000115705,ENSMUST00000115704 1 2 6 86 18 36191585 36191997 TAAGCAAAGTGTCCTGTGG 59 36187051 36187070 CAATTCAAATCCAAGGTGCT 59 NA Mus musculus 50 Ctnna3 ENSMUSG00000060843 ENSMUST00000105441,ENSMUST00000105440,ENSMUST00000075099 1 3 3 80 10 63871963 63871981 TCAACGAATGAAGATGGGA 58 63872024 63950221 AGCATTTATGATCTGTGGAC 57 NA Mus musculus 50 Sfmbt2 ENSMUSG00000061186 ENSMUST00000114868,ENSMUST00000114867,ENSMUST00000041105,ENSMUST00000116594 1 4 8 80 2 10367397 10378539 GGAAGTATTTAAGGACCATGC 58 10378580 10378599 TCGCTTATATGCAATGTCTC 57 NA Mus musculus 50 Cxcl12 ENSMUSG00000061353 ENSMUST00000112866,ENSMUST00000073043,ENSMUST00000112871 2 3 3 73 6 117121584 117121602 TCCTCAACACTCCAAACTG 59 117123531 117123549 GTCAATGCACACTTGTCTG 59 NA DesignNoJunction Mus musculus 50 Lilrb4 ENSMUSG00000062593 ENSMUST00000105482,ENSMUST00000105479 2 2 7 127 10 51211887 51211906 AACATTCAGATGCTATGGCT 59 51213001 51214607 CAGAAGCATCATCTTCAGTG 58 NA Mus musculus 50 Tcp11 ENSMUSG00000062859 ENSMUST00000042692,ENSMUST00000114836,ENSMUST00000043925 2 3 4 80 17 28206305 28206417 GAAGAGTTTCCTGAAACCCT 59 28206244 28206262 AAGGATGGTTAGCTGACTC 58 NA Mus musculus 50 Lin28b ENSMUSG00000063804 ENSMUST00000099849 2 1 4 83 10 45139007 45140340 AAGGGAGATAGGTGGAGAC 59 45138942 45138960 CCTTGGAATCATCCTGGAC 59 NA Mus musculus 50 Lin28b ENSMUSG00000063804 ENSMUST00000079390 3 1 4 84 10 45101226 45138951 GATTCCAAGATGCTACAACTG 59 45101162 45101180 GTAATGGCACTTCTTTGGC 59 NA Mus musculus 50 Vrk2 ENSMUSG00000064090 ENSMUST00000109504,ENSMUST00000078362,ENSMUST00000109505 1 3 3 80 11 26383314 26386967 CAGTTGCAGTGAACTTGTC 59 26383252 26383271 TTGAGCTTCTGATAGTCTGG 58 NA Mus musculus 50 MGI:2682933 ENSMUSG00000066113 ENSMUST00000107178,ENSMUST00000107177,ENSMUST00000084438 2 3 4 80 4 86059691 86061381 TTGGTGATCCAAGATTACTG 57 86061422 86061442 CTGATGAATGCCTCTATTACC 57 NA Mus musculus 50 4921513D11Rik ENSMUSG00000066944 ENSMUST00000086570 2 1 1 60 17 80026964 80026983 CTCCTCAAGTTCAACTACAC 57 80027005 80027024 TCTCCGCAGTAAACTATGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Xlr4b ENSMUSG00000067768 ENSMUST00000069077,ENSMUST00000069103,ENSMUST00000081827 2 3 4 60 X 70467287 70467425 GTTACTGAAGAAACTGTTCACG 59 70467445 70467464 GTGATGATTGAACACCATCC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Zfp760 ENSMUSG00000067928 ENSMUST00000073312 2 1 2 135 17 21858030 21858965 CTCTGTTGAGAAGCATCAC 58 21859064 21859082 TGGAGAGGATTCATGAACC 58 NA Mus musculus 50 Dazap1 ENSMUSG00000069565 ENSMUST00000105362,ENSMUST00000092305,ENSMUST00000105361 3 3 3 109 10 79736785 79737203 CACTCAAGAGACTCTACGC 59 79737276 79737294 ACTTGACAAATCCAAAGCC 58 NA Mus musculus 50 Tia1 ENSMUSG00000071337 ENSMUST00000113713,ENSMUST00000113712,ENSMUST00000095752 1 3 4 97 6 86368917 86370327 GATACGAGCAATCATTTCCA 58 86370386 86370405 GAAATTCTTCCAAATGGTGC 57 NA Mus musculus 50 ENSMUSG00000072573 ENSMUSG00000072573 ENSMUST00000100641 2 1 1 71 5 135155258 135155276 GATTTCCTCCAGACCAGAG 59 135155311 135155329 ATCTTTCCTGAGTCCTCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 D2hgdh ENSMUSG00000073609 ENSMUST00000097633,ENSMUST00000112881 2 2 2 116 1 95735532 95744689 AAAGTCCAGATGCTATGGG 59 95744769 95744787 GATCACAAGGTCGTAGAGC 59 NA Mus musculus 50 2610002J02Rik ENSMUSG00000073684 ENSMUST00000105627,ENSMUST00000097747,ENSMUST00000105628,ENSMUST00000105626 3 4 4 122 4 154625047 154625065 AAATTCTGGTCGAACTCCC 59 154630249 154630267 CTATCCACATCTAGCTGGG 58 NA DesignNoJunction Mus musculus 50 Ccl27 ENSMUSG00000073888 ENSMUST00000108035 2 1 6 62 4 41718288 41718306 TTTCCACATTGATTCCACC 57 41718244 41718262 CTACGCTTCCTTCCATCAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ggh ENSMUSG00000073987 ENSMUST00000029904,ENSMUST00000098242 3 2 2 86 4 19973387 19973407 GTTGGGAAACTACTACATTGC 59 19973455 19976950 CTAAGATCGGGCCTTATGG 59 NA Mus musculus 50 Gramd2 ENSMUSG00000074259 ENSMUST00000098661,ENSMUST00000114056 3 2 2 89 9 59562069 59563737 CATCTTTGTGATGATCTGCT 57 59563788 59563807 CTCAGGGAACATAATTGCTG 58 NA Mus musculus 50 S100a16 ENSMUSG00000074457 ENSMUST00000107335,ENSMUST00000098911,ENSMUST00000107334,ENSMUST00000107333,ENSMUST00000107331,ENSMUST00000098910 2 6 6 103 3 90346032 90346050 AACAAGATCAGCAAGTCCA 59 90346309 90346327 TTCTGGATGAGCTTGTCAG 59 NA DesignNoJunction Mus musculus 50 Tspyl3 ENSMUSG00000074671 ENSMUST00000103153,ENSMUST00000099194 1 2 2 96 2 153050441 153050460 GCTACCTGATGAATTTGGAG 58 153050364 153050382 TCATTTCGGAAGTAAGGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-72 ENSMUSG00000076545 ENSMUST00000103346 1 1 1 74 6 69177035 69177054 CAAGTGTAAGTTACATGCAC 57 69176980 69176998 TGGATGTGGCATAAATCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV3-6 ENSMUSG00000076672 ENSMUST00000103481 2 1 1 60 12 115526643 115526661 TCTGATGTACAGCTTCAGG 58 115526601 115526619 GAGACAGAGACTGAGAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGLV3 ENSMUSG00000076939 ENSMUST00000103751 1 1 1 60 16 19241496 19241515 TTGAATGGTATCAGCAACAG 58 19241455 19241474 TCTTTCTTAAGCTCCATCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001093145.1 ENSMUSG00000078713 ENSMUST00000107810,ENSMUST00000107809,ENSMUST00000107808,ENSMUST00000107807 1 4 4 72 4 45120800 45120818 AACTTCCTCATCTACGTGG 58 45118478 45118496 GTCCTCAGATGCTATCCAG 58 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Mus musculus 50 TRAJ42 ENSMUSG00000076888 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Spg7 ENSMUSG00000000738 ENSMUST00000108871,ENSMUST00000108868 3 2 2 88 8 125590398 125590418 CTAGCTTTGAAGGTATTAGCG 58 125590468 125594286 CAAAGTGCTACCTGAAAGC 59 NA Mus musculus 50 Clpb ENSMUSG00000001829 ENSMUST00000106998,ENSMUST00000106999,ENSMUST00000001884 3 3 3 90 7 108899764 108899782 GAGGAATGAGATGGGACAC 59 108899835 108912103 CTCCATGTACTTGGTCTCAG 59 NA Mus musculus 50 Ccdc44 ENSMUSG00000001983 ENSMUST00000002048 2 1 1 67 11 105930862 105930880 TCTTAGAGTTGTGTCGCAG 59 105930911 105933183 TTTCTCTGTCTTCAGTGCT 58 NA DesignNoJunction Mus musculus 50 Tiam1 ENSMUSG00000002489 ENSMUST00000114124,ENSMUST00000114122,ENSMUST00000002588 1 3 4 80 16 89812179 89812198 GACTTAAACTGCCTCATGGA 59 89811829 89812138 AAGTACATCAAGCTCATCCTG 59 NA Mus musculus 50 Hbp1 ENSMUSG00000002996 ENSMUST00000081639,ENSMUST00000019163 1 2 2 115 12 32625220 32625240 AATACTCACCGTGAAGATGAG 59 32622607 32625145 ATGTGTACAGGAGATGATCTG 59 NA Mus musculus 50 Eif2b5 ENSMUSG00000003235 ENSMUST00000003320 1 1 1 80 16 20505342 20505361 AAGATGAAGATGATGGCCAG 59 20505401 20505543 GATTGTAACCTTTCAGCTTCAC 59 NA Mus musculus 50 Etv3 ENSMUSG00000003382 ENSMUST00000061033 3 1 1 96 3 87331947 87331965 GATCCAGATGAAGTGGCTC 59 87332022 87333159 TGTTGTAATAGTATCTGAGGGC 59 NA Mus musculus 50 Ap1s1 ENSMUSG00000004849 ENSMUST00000111080 1 1 1 90 5 137517735 137518941 TATAAGAGATACGCCAGTCTC 58 137517665 137517683 CTACGTATCGGTGGATCAG 59 NA Nonspecific Mus musculus 50 Map2k1 ENSMUSG00000004936 ENSMUST00000005066 2 1 1 91 9 64035499 64035517 TCAGTCTGGAGTTTCAGGA 59 64034594 64035104 GAAAGCATGTACCATGAGC 58 NA Mus musculus 50 Wdr1 ENSMUSG00000005103 ENSMUST00000005234 3 1 1 80 5 38926556 38928389 ATGGACATATCAAGACAGGAG 58 38926496 38926514 CATTCACAGTCATCCTGGA 58 NA Mus musculus 50 Wbscr22 ENSMUSG00000005378 ENSMUST00000085984,ENSMUST00000071677,ENSMUST00000005512 2 3 3 81 5 135532245 135532723 CAAAGCAAAGAAGTTCTACCTC 59 135531933 135531951 TGCATCCTGACTTTCAGTC 59 NA Mus musculus 50 Psmd4 ENSMUSG00000005625 ENSMUST00000107237,ENSMUST00000071664 3 2 2 81 3 94839206 94839224 GCAAGAATCACAAGATGCG 59 94838916 94839163 TTAGCTAGTTTCACCAGATCC 59 NA Mus musculus 50 Eps8l1 ENSMUSG00000006154 ENSMUST00000086372 2 1 1 94 7 4429288 4429501 AAGACACCTAGAGACTAGCA 59 4429558 4429576 TTAGACTGTCGCAACTGTC 59 NA Mus musculus 50 Pgrmc1 ENSMUSG00000006373 ENSMUST00000073339 2 1 1 88 X 34142200 34142219 AGTATGACGACCTTTCTGAC 59 34142267 34144799 CACGTGATGATACTTGAAAGTG 59 NA Mus musculus 50 Slc5a6 ENSMUSG00000006641 ENSMUST00000080431,ENSMUST00000114668,ENSMUST00000114665,ENSMUST00000006817 2 4 4 130 5 31345425 31345443 GATCTTCCGATTTGGAACC 58 31345008 31345331 GCTCTAGGTACTCATAGGC 58 NA Mus musculus 50 Pcdha1 ENSMUSG00000007440 ENSMUST00000070797 3 1 9 236 18 37092310 37315811 CAGATCTTTCTGGTAATCCC 57 37344653 37344671 CGTATTTAAAGGTCCAGCT 57 NA DesignNoJunction Mus musculus 50 Podnl1 ENSMUSG00000012889 ENSMUST00000093380 2 1 1 82 8 86655872 86655890 CAGGCTAACCGTATCAGTC 59 86655935 86656029 CTGTTAGCCCTGAGAAAGAG 59 NA Mus musculus 50 Tmem190 ENSMUSG00000013091 ENSMUST00000013235 2 1 1 95 7 4735605 4735709 GTATCTGTCTCTTCTGGTGG 59 4735767 4735785 AGGAGACTGTCTTTGACAG 58 NA Mus musculus 50 4933405L10Rik ENSMUSG00000013158 ENSMUST00000013302 1 1 1 85 8 108232905 108233312 CAAGAGAAAGTCAGAAGTTGAG 58 108233358 108233376 ACAGTGAGGATTCACTGTG 59 NA Mus musculus 50 Tmem87b ENSMUSG00000014353 ENSMUST00000110325 3 1 1 80 2 128668420 128671202 CAGCAAATAATCAGAGGTATGC 59 128671240 128671261 CAGATGTTACCATGAATTCCTC 58 NA Nonspecific Mus musculus 50 Anapc1 ENSMUSG00000014355 ENSMUST00000014499,ENSMUST00000110333 1 2 3 80 2 128505304 128505322 CCACTAAATATGGCTTGCT 57 128504007 128505260 TAGGCAAAGGTTCTCTAGG 57 NA Mus musculus 50 Plekhg4 ENSMUSG00000014782 ENSMUST00000014927 3 1 1 88 8 107904103 107904203 CTTCTTTAAGGAGAAGCAGC 58 107904254 107904272 CATACTTGCTCATGTGCTG 58 NA Mus musculus 50 Adamts13 ENSMUSG00000014852 ENSMUST00000102891,ENSMUST00000014996 3 2 2 85 2 26844932 26845840 AGATTCAGGTGTACAGACG 58 26845888 26845907 CTGCTTCAGTTGAAAGTAGG 58 NA Mus musculus 50 Unkl ENSMUSG00000015127 ENSMUST00000015271 1 1 3 126 17 25365598 25367156 CCTTGGATTGACAGGTCTG 59 25367246 25367264 GTTTGGACTTGCACTTGAG 59 NA Nonspecific Mus musculus 50 1700054F22Rik ENSMUSG00000015242 ENSMUST00000107666 2 1 1 60 4 53008803 53008823 TACCTATTTGGTACCATGGTG 59 53008844 53010045 CAGTTCATAGACTCCTTCCT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Golga7 ENSMUSG00000015341 ENSMUST00000051094 2 1 1 83 8 24367201 24367220 TTCATTCAGCGAGACTACAG 59 24360865 24367155 TCTGTCAATCCTGTTCTCC 58 NA Mus musculus 50 Matn4 ENSMUSG00000016995 ENSMUST00000103104,ENSMUST00000109359,ENSMUST00000109358,ENSMUST00000103103,ENSMUST00000059332,ENSMUST00000109362,ENSMUST00000109361,ENSMUST00000109360 2 8 8 60 2 164218859 164218878 CTCTCAGGATGACATTTCAG 57 164218717 164218836 ATACATGACGATGCCTTCC 59 NA DesignRelaxed Mus musculus 50 Zpbp2 ENSMUSG00000017195 ENSMUST00000107511,ENSMUST00000107509,ENSMUST00000107513,ENSMUST00000017339 1 4 5 80 11 98416070 98416807 CATAGCCTTTCAAGTGAATCC 59 98416848 98416867 TTCGTGATGTCTTCACAGTC 59 NA Mus musculus 50 Sgk2 ENSMUSG00000017868 ENSMUST00000018012,ENSMUST00000109433 2 2 2 80 2 162823667 162823970 TCAACATCATCTACAGAGACC 58 162829017 162829035 CTTTACGAAGCACTTCTGG 58 NA Mus musculus 50 Hdac2 ENSMUSG00000019777 ENSMUST00000019911,ENSMUST00000105510 3 2 2 85 10 36711629 36711647 TTATACAACAGATCGCGTG 57 36711696 36713423 CACCAATATCCCTCAAGTC 57 NA Mus musculus 50 Fyn ENSMUSG00000019843 ENSMUST00000099967,ENSMUST00000063091 3 2 2 100 10 39251913 39251931 GAAGAAGCTGAAGCATGAC 58 39251995 39253451 CAAGCAAACTTCCTTTGCT 59 NA Mus musculus 50 Slc1a4 ENSMUSG00000020142 ENSMUST00000109594,ENSMUST00000004634 2 2 2 82 11 20206595 20207904 TCACCATTCTAGTGACTGC 58 20206531 20206549 GATGATGGCAATTGTGAGG 58 NA Mus musculus 50 2810021J22Rik ENSMUSG00000020491 ENSMUST00000063164 3 1 4 91 11 58690263 58690281 GTCAGAGGAAGCTCTACAG 58 58691458 58691476 AAACTTTGAAACCGTGCTG 59 NA DesignNoJunction Mus musculus 50 Arsg ENSMUSG00000020604 ENSMUST00000106697,ENSMUST00000020928,ENSMUST00000106696 1 3 3 98 11 109424574 109433538 TTCTACATCACTGGTGGAG 58 109433600 109433618 ATCAGCAGCATCTTCTAGG 58 NA Mus musculus 50 1500010J02Rik ENSMUSG00000020898 ENSMUST00000021278,ENSMUST00000108667,ENSMUST00000116359 2 3 3 80 11 68836048 68836068 GATTCGGAACAAGAATGTAGG 58 68836108 68836222 TAGATCAATGAGCTCACAGTC 59 NA Mus musculus 50 Zc3h14 ENSMUSG00000021012 ENSMUST00000110105,ENSMUST00000110104,ENSMUST00000066979,ENSMUST00000047981,ENSMUST00000057000,ENSMUST00000021399 2 6 6 104 12 100023856 100023875 TAACACTCAGTGTACGAGAC 58 100023942 100024793 CATCACTCACTGCTCTGAG 59 NA InUTR Mus musculus 50 Wdr21 ENSMUSG00000021222 ENSMUST00000021645 1 1 1 80 12 84878755 84878903 TTCAGTACAGGTTTGTCTCG 59 84878943 84878964 ATCACTGTTGATCCTGTATGAC 59 NA Mus musculus 50 0610007P14Rik ENSMUSG00000021252 ENSMUST00000021676 3 1 1 82 12 87157137 87157278 CTGATGGTAGCAAGTTTCTC 58 87157074 87157093 TTCTTCTGTCTGGATACTGG 58 NA Mus musculus 50 Ube2e1 ENSMUSG00000021774 ENSMUST00000022296 1 1 1 114 14 19116924 19117657 CTCCAAAGGTTACATTTCGT 58 19116829 19116847 ACTTTCGAGATGGTTAGGG 58 NA Mus musculus 50 Peli2 ENSMUSG00000021846 ENSMUST00000111739 2 1 2 153 14 48787536 48787889 GGTACAATGGTGCTTTACC 58 48798820 48798838 TAGTAATGCTTTGCTGCTG 58 NA DesignNoJunction Mus musculus 50 1700129C05Rik ENSMUSG00000021977 ENSMUST00000022548 2 1 1 80 14 59758892 59758912 GAGACTGGAAATCATGAAGTG 58 59758504 59758850 CATTCTGTCCAGTGTTTCC 58 NA Mus musculus 50 Tgds ENSMUSG00000022130 ENSMUST00000022727 1 1 1 80 14 118516964 118516982 GGACCACATCAGTATCCAG 59 118515454 118516198 TCCATGAATACAGCACTTCC 59 NA Mus musculus 50 EG433634 ENSMUSG00000022187 ENSMUST00000056145 1 1 1 115 3 104157168 104170388 GCTTTCAGGATTCTGTGGA 59 104157071 104157089 ATACAGGAAGCATGGAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cmbl ENSMUSG00000022235 ENSMUST00000070918 2 1 1 96 15 31515183 31517934 TCTGTCTATGGTATCATCAGAG 58 31517991 31518009 CAAGTGGAATCACAGTGTC 58 NA Mus musculus 50 Laptm4b ENSMUSG00000022257 ENSMUST00000022867 2 1 1 159 15 34203055 34203074 ATCACTGTGCTTGTCTATCC 59 34205980 34207196 TCAAGTAGCCCTTAAGTGTC 59 NA Mus musculus 50 Dlg1 ENSMUSG00000022770 ENSMUST00000115205,ENSMUST00000115197,ENSMUST00000115201,ENSMUST00000064477,ENSMUST00000100001,ENSMUST00000115207,ENSMUST00000023454 1 7 8 80 16 31684368 31743198 CCCTCCAGTAGAGAAATACC 58 31743241 31743259 ACCTCATTTGTGACTTGTG 57 NA Mus musculus 50 Sult1c2 ENSMUSG00000023122 ENSMUST00000023886 1 1 1 80 17 53971456 53971474 AAGGATGGTGGGAAATTCG 59 53971260 53971412 TTTCATGCTTTGGGTTCCT 59 NA Mus musculus 50 March5 ENSMUSG00000023307 ENSMUST00000024078 1 1 1 139 19 37295166 37295184 TAACCCTTTAGCAGACCAC 58 37295286 37295889 CAATTCCACCCAAGATTGTC 59 NA Mus musculus 50 Crip3 ENSMUSG00000023968 ENSMUST00000113465 3 1 2 226 17 46567800 46567953 TTGCTGAGAAAGTGATGTC 57 46568235 46568339 CAATGTTCACACCACAAGG 59 NA DesignRelaxed, InUTR Mus musculus 50 2010001M09Rik ENSMUSG00000024353 ENSMUST00000025211 1 1 1 117 18 35807999 35808017 AGCAGAGGCTAAATCTCAC 59 35807576 35807918 ATGAACTCCATAGGACTGC 58 NA Mus musculus 50 Atp6v1g2 ENSMUSG00000024403 ENSMUST00000068261 3 1 1 200 17 35374133 35374151 GAACAGGAGTTTCAGAGCA 59 35374721 35374740 GACAGTAACCCGATAGTTGG 59 NA DesignNoJunction Mus musculus 50 Tm7sf2 ENSMUSG00000024799 ENSMUST00000025713,ENSMUST00000113544,ENSMUST00000113543 2 3 3 80 19 6063982 6064088 CTGGTATGAGGAGTCTGTC 58 6063920 6063938 GCTAGATCTCCAAAGACCA 58 NA Mus musculus 50 4932417H02Rik ENSMUSG00000025583 ENSMUST00000026671 3 1 1 85 11 119719233 119719251 GAGTACATCCTGTCCTTCG 59 119719298 119726875 AAAGAAACTCCTATGAGGGAG 58 NA Mus musculus 50 Pfkfb4 ENSMUSG00000025648 ENSMUST00000051873,ENSMUST00000098369 2 2 3 80 9 108909333 108909351 TTGATGCAACCAATACGAC 58 108909395 108909746 CAAAGAAGGTCTTGTAGCC 58 NA Mus musculus 50 F430201B04Rik ENSMUSG00000025727 ENSMUST00000085027,ENSMUST00000088234 2 2 2 62 17 26080532 26080550 TGACTGGGCATAACTTTGG 59 26080488 26080506 CAATAATGCTACCCTCTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 F430201B04Rik ENSMUSG00000025727 ENSMUST00000085027,ENSMUST00000088234 3 2 2 62 17 26080532 26080550 TGACTGGGCATAACTTTGG 59 26080488 26080507 CAATAATGCTACCCTCTGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem14a ENSMUSG00000025933 ENSMUST00000027065 2 1 1 97 1 21216673 21216691 TTACAGCTTTCTTCCTGGC 59 21216752 21219681 CATCATGAGGCTTAAGCCT 59 NA Mus musculus 50 Cps1 ENSMUSG00000025991 ENSMUST00000027144 1 1 1 80 1 67226692 67226710 CATCGACAAGTGGTTTCTG 58 67226754 67241725 ACAGAGTCACTGTTAAGCC 59 NA Mus musculus 50 Npas2 ENSMUSG00000026077 ENSMUST00000056815 2 1 1 80 1 39385233 39385251 ACTACATCACCTACCACCA 59 39385295 39387795 GAACATCTGCGTAACTGAC 58 NA Mus musculus 50 Cyp27a1 ENSMUSG00000026170 ENSMUST00000027356 1 1 1 99 1 74778673 74781858 ATCTTCATCGCACAAGGAG 59 74781921 74781939 TTAAGGCATCCGTGTAGAG 58 NA Mus musculus 50 Slc35f5 ENSMUSG00000026342 ENSMUST00000027580 2 1 1 80 1 127465176 127467133 GTAGTTCTTTGAGTGAACCTC 58 127467175 127467193 CAATGTTTGTGCTCTCGAG 59 NA Mus musculus 50 Lgtn ENSMUSG00000026427 ENSMUST00000086578,ENSMUST00000068791,ENSMUST00000068805,ENSMUST00000112446 3 4 4 147 1 133061774 133062910 CAGACAACAGAAATCTGGTG 58 133064716 133064735 AATGTTACTTGGTAGGCAGG 59 NA Mus musculus 50 Rsu1 ENSMUSG00000026727 ENSMUST00000028059,ENSMUST00000114791 3 2 2 80 2 13138895 13140651 AACTTCTTCTACCTCACCAC 58 13138834 13138852 CTTCCCAATATCTGGAGGC 59 NA Mus musculus 50 Col5a1 ENSMUSG00000026837 ENSMUST00000028280 2 1 1 89 2 27881152 27881171 ACTCCTTCAAAGTCTACTGC 59 27881223 27884502 AAGAAGTGATTCTGGCTCC 59 NA Mus musculus 50 Zfp385b ENSMUSG00000027016 ENSMUST00000111830,ENSMUST00000111831,ENSMUST00000090766 3 3 5 81 2 77253833 77253852 TACTCTACTGCTCACTATGC 58 77252793 77253791 GTCTTGTGTTTAGATCCTGTG 58 NA Mus musculus 50 Mrps5 ENSMUSG00000027374 ENSMUST00000028852 3 1 1 122 2 127417673 127420183 GCTTCTTCACCAAACTGAC 58 127420269 127420287 CCCTGTTCAAATCCTTCCT 59 NA Mus musculus 50 Cst8 ENSMUSG00000027442 ENSMUST00000109947,ENSMUST00000028931 1 2 2 117 2 148625843 148625861 TAATGCCAATGTGAAGCAG 58 148625941 148630327 GTCTGTGATCTGAAGTTTGG 58 NA Mus musculus 50 Zfp64 ENSMUSG00000027551 ENSMUST00000109162,ENSMUST00000029064 2 2 5 60 2 168732340 168732358 TTTAACTGCCGCTATCCAG 59 168731605 168731623 GGTCCAAATCTTTCATGCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Tloc1 ENSMUSG00000027706 ENSMUST00000029256 2 1 1 60 3 30713261 30717425 TTCTCCTTGCTATTGCTCG 59 30717449 30717467 CTTCCTCCAGTTATCAGCC 59 NA DesignRelaxed Mus musculus 50 Alpk1 ENSMUSG00000028028 ENSMUST00000029662 2 1 1 81 3 127389224 127389242 TGAGAGTGACAAAGTCCTG 58 127388219 127389179 TTCATACCACATGCCTAGC 59 NA Mus musculus 50 Thbs3 ENSMUSG00000028047 ENSMUST00000029682 1 1 1 83 3 89028319 89028337 ATCAGACTGTGATCCTGGA 59 89028384 89028514 GAACAATTTCCATGCCCTG 59 NA Mus musculus 50 Nudt17 ENSMUSG00000028100 ENSMUST00000029742 3 1 1 153 3 96511964 96511982 CCAGACTGTACTGTTGACC 59 96511565 96511742 CTCCAGTATCTGCAAGAGG 59 NA Mus musculus 50 Spata1 ENSMUSG00000028188 ENSMUST00000029839,ENSMUST00000093951 1 2 2 141 3 146152874 146156646 CTTCATCAGAGTTGGTGGA 58 146151705 146151723 TGTAAGGTAAGCTGAGGAG 57 NA Mus musculus 50 Spaca1 ENSMUSG00000028264 ENSMUST00000084734,ENSMUST00000029927 2 2 3 92 4 34127842 34127863 GATAGTGCTAGACTATCATGTG 57 34126345 34127790 TATAACAGGTTGTTGGTCTG 57 NA Mus musculus 50 Mfsd2 ENSMUSG00000028655 ENSMUST00000030408 1 1 1 80 4 122626091 122626112 CTCCTTCTATGTCTTCTTCACC 59 122625940 122626050 TAGTTGGCAAAGTCGAGAC 59 NA Mus musculus 50 Pnrc2 ENSMUSG00000028675 ENSMUST00000030436 2 1 1 101 4 135428365 135428824 AAAGCAAACTGAAAGGTGAC 59 135428283 135428303 CTGTTCTTGGTTCTTACTAGC 58 NA InUTR Mus musculus 50 Cyp4a31 ENSMUSG00000028712 ENSMUST00000030480,ENSMUST00000106538 1 2 2 119 4 115239102 115239120 TTAAACGGACAGTCATGGT 58 115239201 115242322 CCATTTGTCTAGCATCAATCG 59 NA Mus musculus 50 4931403E03Rik ENSMUSG00000028753 ENSMUST00000030533,ENSMUST00000105812 2 2 2 82 4 138168776 138168794 CTATGTCAGTGGCTATGCC 59 138166775 138168730 CGAAGAGACCTTGAAAGGG 59 NA Mus musculus 50 A3galt2 ENSMUSG00000028794 ENSMUST00000030585 1 1 1 83 4 128438739 128438907 ATTATCAGGCTCATAGAAGGC 59 128438952 128438970 TCCTGTGAAATTGTCCCTC 59 NA Nonspecific Mus musculus 50 Atpbd1b ENSMUSG00000028848 ENSMUST00000030661,ENSMUST00000105899 2 2 2 60 4 133144564 133145688 CTGAACATCCAGGACAAGG 59 133145711 133145730 CATTAGCTTTATCCACAGCC 58 NA DesignRelaxed Mus musculus 50 Paics ENSMUSG00000029247 ENSMUST00000031160 2 1 1 60 5 77390522 77391460 GGACAAACAGTCTTACCGT 59 77391484 77391502 CTTTACCATCTGGAGTCCT 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Glmn ENSMUSG00000029276 ENSMUST00000082121,ENSMUST00000078021,ENSMUST00000100949 3 3 3 80 5 107978461 107978479 TAAAGGTGTTTGTTCCGTG 58 107978184 107978419 GAATGTAAGACCTTAAGCTGC 59 NA Mus musculus 50 Kntc1 ENSMUSG00000029414 ENSMUST00000031366 1 1 1 80 5 124259111 124260828 TCAGCTACAAGTACACTGG 58 124260872 124260890 AGCCAAATAGAGGAGACAC 58 NA Mus musculus 50 Rab35 ENSMUSG00000029518 ENSMUST00000031492 2 1 1 82 5 116090201 116093386 CATCACCTCTACGTATTATCGG 59 116093429 116093447 TGACGTTGACAAAGGACTC 59 NA Mus musculus 50 Nobox ENSMUSG00000029736 ENSMUST00000031749 2 1 1 82 6 43256402 43256725 CAAAGAATCATGGTGTGGT 57 43256338 43256358 CCATTCTTAGTTTCCTTCTCG 58 NA Mus musculus 50 2410127E18Rik ENSMUSG00000029775 ENSMUST00000068259,ENSMUST00000068240 1 2 2 80 6 30394506 30394524 TAGATCTCAACACCATGGT 57 30394568 30396628 CATGTCTGTACCTCTCCTC 58 NA Mus musculus 50 Rasgef1a ENSMUSG00000030134 ENSMUST00000032230 1 1 1 80 6 118037078 118037097 GAGTTCTTCATTGATGTGGC 59 118037139 118037235 GTTCATGCCAGATATGATGG 58 NA Mus musculus 50 Clec2d ENSMUSG00000030157 ENSMUST00000032260 1 1 1 80 6 129133164 129133184 AGCTTTACTGCTACTATGGAG 59 129133226 129134161 TCTTTGTTGCTGACAAAGC 59 NA Mus musculus 50 St8sia1 ENSMUSG00000030283 ENSMUST00000032421 3 1 1 70 6 142816424 142816442 TGAGTACACCAGAGATGTC 57 142777789 142816390 ATCTCTGGCGAATTATGCT 58 NA DesignNoJunction Mus musculus 50 Pex11a ENSMUSG00000030545 ENSMUST00000032761,ENSMUST00000098352 2 2 2 82 7 86885104 86885123 TCTAAAGCTGACAAAGAGGC 59 86882787 86885059 AGTCTGAACCATTTACGGC 59 NA Mus musculus 50 Rps3 ENSMUSG00000030744 ENSMUST00000032998 1 1 1 80 7 106630292 106630779 AGCGTAGAGCTTTATGCAG 59 106630230 106630250 GAGTTTGTAGCGTAGAGACTC 59 NA Nonspecific Mus musculus 50 Fus ENSMUSG00000030795 ENSMUST00000077609,ENSMUST00000106249,ENSMUST00000106251 1 3 3 147 7 135113087 135113235 CAAGCAACTCAAAGCTACG 59 135113346 135113364 AAGAACCATAGCTGCTCTG 59 NA Mus musculus 50 Abcc6 ENSMUSG00000030834 ENSMUST00000002850 1 1 1 80 7 53232659 53232677 GGTTTACACAGTGTACCGT 59 53232298 53232616 CATCCATGACTAGGACTCTG 58 NA Mus musculus 50 Dgat2l4 ENSMUSG00000031220 ENSMUST00000033567 1 1 1 92 X 97598269 97598486 CACTGTTGTTGGAGAACCT 59 97598195 97598215 AGGGCATCAATATAGAGTGTG 59 NA Mus musculus 50 Erlin2 ENSMUSG00000031483 ENSMUST00000033873 2 1 1 80 8 28137708 28139377 TATAAGTCTGTACAGACCACTC 58 28139811 28139829 GTAGATCATCACACCACCA 58 NA Mus musculus 50 Txnl4b ENSMUSG00000031723 ENSMUST00000034159 1 1 1 136 8 112095409 112096598 AAGGTGGATTATGGGTCTC 58 112096697 112096716 GGATCAATAGGACTCTGGAC 58 NA Nonspecific Mus musculus 50 Nudt21 ENSMUSG00000031754 ENSMUST00000034204 3 1 1 80 8 96548504 96552742 CTCCTCAGTATCCGTATATTCC 59 96548445 96548463 TCTCTTGAAGCTGAACCAG 59 NA Nonspecific Mus musculus 50 Rrad ENSMUSG00000031880 ENSMUST00000034351 2 1 1 76 8 107153621 107153739 ACATTTGGGAACAGGATGG 59 107153563 107153581 GTACACGATGACGTATGCA 59 NA DesignRelaxed Mus musculus 50 Pigb ENSMUSG00000032203 ENSMUST00000093819 3 1 1 62 9 72862852 72862870 GTTATCACTCCAGGAAGCA 58 72862808 72862826 TCATTGAGGGATAAAGCCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2310046O06Rik ENSMUSG00000032305 ENSMUST00000093833,ENSMUST00000114200 3 2 2 128 9 57385622 57385640 TTCCATTCAGGCTAAGCTG 59 57386618 57386638 CCCTTGTTAAACTTCACTGAC 59 NA DesignNoJunction Mus musculus 50 Mto1 ENSMUSG00000032342 ENSMUST00000034896 1 1 1 80 9 78297578 78297596 TCTAGTTCTTGCAGAACCA 58 78297640 78300586 ATTGTACTTCCATCTGCCA 58 NA Mus musculus 50 Dpp8 ENSMUSG00000032393 ENSMUST00000034960 1 1 1 80 9 64899300 64900863 GGAAAGAACTCCTAGTGGTG 59 64900903 64900924 ACATGAATAATCTCCACCTCAG 59 NA Mus musculus 50 Syncrip ENSMUSG00000032423 ENSMUST00000069221 1 1 1 80 9 88357123 88357142 CTGGAACGAGTAAAGAAGCT 59 88356618 88357081 TTCTTCCATAGCCTTGACAG 59 NA Mus musculus 50 1700036D21Rik ENSMUSG00000032493 ENSMUST00000011392,ENSMUST00000098345 1 2 2 81 9 110718040 110718925 CAAAGTACTTGAACAAGGTAGG 58 110718965 110718985 CTGGTTACATTTCTCATGACG 59 NA Mus musculus 50 Ogfod1 ENSMUSG00000033009 ENSMUST00000109556,ENSMUST00000093301 3 2 2 80 8 96576059 96578507 GAAATACGAGTTCACTGATGC 59 96578548 96578567 ACCAGGTACAGAATGAAAGC 59 NA Nonspecific Mus musculus 50 Dis3 ENSMUSG00000033166 ENSMUST00000042471,ENSMUST00000068042 2 2 2 81 14 99496038 99496811 CTTCACGTGTGAAGAATACG 58 99495976 99495996 CATTTCATCGGACAAGTAAGC 59 NA Mus musculus 50 Shf ENSMUSG00000033256 ENSMUST00000110532,ENSMUST00000110531,ENSMUST00000048635 2 3 4 204 2 122183020 122185197 AAAGATGATGGCTGAGATCC 59 122182835 122182853 AATCCGTTCCTTCTTCCAC 59 NA DesignRelaxed Mus musculus 50 Casp4 ENSMUSG00000033538 ENSMUST00000027012 1 1 1 80 9 5328475 5328494 TCACTAGACTCATTTCCTGC 59 5328537 5336008 ATGATTGTTGCACCTTCAG 58 NA Mus musculus 50 Vps8 ENSMUSG00000033653 ENSMUST00000115397,ENSMUST00000096192,ENSMUST00000042520,ENSMUST00000096191 3 4 4 80 16 21463762 21466494 TTCACTTTCTCCTGGTTAAGAG 59 21466534 21466553 GGTCATAGTACAGGTGAAGG 59 NA Mus musculus 50 Ucp2 ENSMUSG00000033685 ENSMUST00000032957 2 1 1 87 7 107646880 107646898 AATGCCATTGTCAACTGTG 58 107646949 107647253 GGAGGTCATCTGTCATGAG 59 NA Mus musculus 50 Gal3st2 ENSMUSG00000034005 ENSMUST00000094663 2 1 1 60 1 95769102 95770170 TTCAGACTACTTAAACCGGAC 59 95770191 95770210 TGAGGAACATGATGTTTGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Nup54 ENSMUSG00000034826 ENSMUST00000038514 2 1 1 81 5 92848597 92848615 TCAAACTACGACTATGGCC 59 92846918 92848553 GATTAGGACCTGTAAGGTCC 58 NA Mus musculus 50 F630110N24Rik ENSMUSG00000034854 ENSMUST00000044844 3 1 1 80 10 80824971 80824989 CTGGTGATGTACTTGAGTG 57 80825033 80825441 GTAGGTCATATTCCTCCCT 57 NA Mus musculus 50 Cobll1 ENSMUSG00000034903 ENSMUST00000090894 3 1 9 81 2 64989035 64989053 TACTACTGTTCATGGCAGG 58 64988972 64988990 TCACAGTGGTTTCAATGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Stab2 ENSMUSG00000035459 ENSMUST00000035288,ENSMUST00000099391,ENSMUST00000099390 3 3 3 82 10 86459659 86465718 TCGAGATTGCAGGTATTCG 59 86459595 86459617 GGTAATCCTTCCTACAGATATGG 59 NA Mus musculus 50 BC067068 ENSMUSG00000036009 ENSMUST00000046638 1 1 1 80 10 105260362 105263070 TTATTGAAGATCTGGAGGACTG 59 105260303 105260323 TAAATATCCGCAGAGTACTGG 59 NA Mus musculus 50 Gm98 ENSMUSG00000036098 ENSMUST00000096230,ENSMUST00000088013 3 2 2 81 19 10291265 10291924 CTTGTAGTGAACAAGGAGC 58 10291202 10291220 TCTCTAGGTTGTCTGTCAG 57 NA Mus musculus 50 Znrd1 ENSMUSG00000036315 ENSMUST00000057564 3 1 2 132 17 37095191 37095210 GCTCCAACTTTCAATCAGAC 59 37094862 37095096 ACCTTCCCTTCACAATCTC 58 NA Mus musculus 50 Thap11 ENSMUSG00000036442 ENSMUST00000040445 2 1 1 109 8 108380059 108380077 AAGGAGATGAAGGGTAGCA 59 108380150 108380168 TGCTTCTTACGGATGACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lgi4 ENSMUSG00000036560 ENSMUST00000039775,ENSMUST00000088438 3 2 2 84 7 31852821 31852839 GAGGAGATGTGTTCCTGTG 59 31853915 31853933 TGTAACAGTCGGAACATGG 59 NA DesignNoJunction Mus musculus 50 Olfr11 ENSMUSG00000036658 ENSMUST00000043081 1 1 1 60 13 21730891 21730909 TTCTAACTCTCCAGTTGCC 58 21730849 21730868 ACTTCACAAAGAAAGTGGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Trim17 ENSMUSG00000036964 ENSMUST00000047697,ENSMUST00000075141 3 2 2 95 11 58779041 58780287 GAGTATAAGCTCAAGTTGGAG 57 58780344 58780362 AGTTAAGGTCTGTTCCTCC 58 NA Mus musculus 50 2410018C17Rik ENSMUSG00000037339 ENSMUST00000045329,ENSMUST00000065119,ENSMUST00000065162 1 3 4 60 5 33957279 33957297 CCAGAGTTTGGATGACCTC 59 33953121 33957255 CTTCTCAGCAGAATACGGG 59 NA DesignRelaxed Mus musculus 50 Atp11b ENSMUSG00000037400 ENSMUST00000108186,ENSMUST00000029257,ENSMUST00000108185 2 3 3 80 3 35687469 35688492 ACCTAAAGACACATGTGTCAG 59 35688530 35688552 CTATTACAGCTATGAGACTGTCC 59 NA Mus musculus 50 D430028G21Rik ENSMUSG00000037523 ENSMUST00000041362,ENSMUST00000110199 1 2 2 80 2 131067776 131068864 CCCAGTAGAGAATTCAGAGC 59 131068907 131068925 GAGGGTATCAAAGAGCCAC 59 NA Mus musculus 50 Scarf1 ENSMUSG00000038188 ENSMUST00000071964 3 1 2 121 11 75335691 75335709 TAAGAACGCCCTCATTGTG 59 75335794 75338885 CATAGGGACCATCTCTGTC 58 NA DesignRelaxed Mus musculus 50 Perld1 ENSMUSG00000038208 ENSMUST00000090827 2 1 2 104 11 98259221 98259239 ATGTACCATACCTGCATGG 59 98252444 98253017 GTAGTCCATCTTCTCTGTGAG 59 NA Mus musculus 50 Otud7b ENSMUSG00000038495 ENSMUST00000035519,ENSMUST00000090785,ENSMUST00000098849 2 3 3 90 3 95956543 95957342 TTGGCCAGTATAATTCTGTC 57 95957395 95957413 GTGAATCAGAAGACAGTGG 57 NA Mus musculus 50 Tbc1d17 ENSMUSG00000038520 ENSMUST00000047085 1 1 1 80 7 52097662 52098001 TGATTTCCTGGATTCTCAGG 59 52097601 52097619 GGGAATTCCCTCTTGAACC 59 NA Mus musculus 50 Pcid2 ENSMUSG00000038542 ENSMUST00000046904 1 1 1 80 8 13095862 13097612 TGATAGTCCAATCATTCCTCC 58 13094169 13094187 GTGCTACTGCATACATGAC 58 NA Mus musculus 50 Ppp1r3f ENSMUSG00000039556 ENSMUST00000115742,ENSMUST00000045924,ENSMUST00000115741 1 3 3 112 X 7141060 7141372 TACCCTAGCAGAACATCCT 59 7137988 7138006 TGGTCAACATAACTTCGGG 59 NA Mus musculus 50 2810432L12Rik ENSMUSG00000039611 ENSMUST00000042750 2 1 1 60 4 49599416 49599434 ACAATCCAGACTATGTCCT 57 49599374 49599392 GGGAAGATCTGTTCTTCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 BC048651 ENSMUSG00000039742 ENSMUST00000090487 1 1 2 80 6 29273901 29273919 TACCATCCTTGTCACTCAC 58 29273960 29276589 GATTTCTTCTGCACTAACTCAG 59 NA Mus musculus 50 2410089E03Rik ENSMUSG00000039801 ENSMUST00000110617,ENSMUST00000053264 3 2 3 80 15 8137570 8138396 AGGTCACAGATTGATTGCT 58 8138439 8138458 GGAGTTCTTTGGCTTAACTG 58 NA Mus musculus 50 Xkr5 ENSMUSG00000039814 ENSMUST00000095438,ENSMUST00000055503 3 2 2 90 8 18934599 18937238 GATTTCTGATTGGGTGTGC 59 18934527 18934546 CATTTCCTCATGAAGCTCTG 58 NA Mus musculus 50 Wfdc5 ENSMUSG00000040154 ENSMUST00000045127 1 1 1 80 2 164004369 164004481 CGTGTCTTTGTAAAGTCGG 58 164004307 164004326 GTCTTTGTTACACATGTGCT 58 NA Mus musculus 50 Tax1bp3 ENSMUSG00000040158 ENSMUST00000108477 1 1 2 210 11 72994000 72994597 AAACAGACAAGGTGAATGG 57 72994771 72994789 CATGGATGTGTTCTCACTG 58 NA DesignRelaxed, InUTR Mus musculus 50 Daam2 ENSMUSG00000040260 ENSMUST00000057610,ENSMUST00000086917 3 2 2 80 17 49629365 49629383 ACAAGAAGGTTCTACAGGC 59 49628365 49629322 GTTCATTCAGCAAAGTCTGG 59 NA Mus musculus 50 Tlr8 ENSMUSG00000040522 ENSMUST00000112170,ENSMUST00000112169 1 2 3 111 X 163701744 163701762 AGAGCACATCTTCTTCCAG 58 163683752 163683770 CAGAATCCATGACTGAGGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Tbl3 ENSMUSG00000040688 ENSMUST00000046534 1 1 1 90 17 24838689 24838707 TCCCGAATCATTCTCTGGA 59 24838318 24838555 GTTCTTGCTGCTTGATCAC 59 NA Mus musculus 50 Il25 ENSMUSG00000040770 ENSMUST00000037863 1 1 1 142 14 55552054 55553950 GAGCTATGAGTTGGACAGG 59 55554056 55554074 TCTGGTTGTGGTAAAGTGG 59 NA Mus musculus 50 Gpr161 ENSMUSG00000040836 ENSMUST00000043164,ENSMUST00000111450 3 2 2 139 1 167241117 167247381 GATCACAGACTTGGGTCTG 59 167248888 167248906 CATCTTCCAACAGCATCAC 58 NA Mus musculus 50 Pnmal1 ENSMUSG00000041141 ENSMUST00000038163 3 1 1 126 7 17546733 17546751 TTCTGAAGAAAGGGCTTGG 59 17546841 17547381 AGCTTCCTGGAATCTTTGG 59 NA Mus musculus 50 Rpusd1 ENSMUSG00000041199 ENSMUST00000047273 1 1 1 81 17 25865803 25865821 GATCAACTATGCCATTGGC 58 25865866 25866023 GTTCTCACAACCATGAGTG 58 NA Mus musculus 50 Nfrkb ENSMUSG00000042185 ENSMUST00000086167 3 1 1 80 9 31196564 31196583 GTACAGGAATCATGGAGGAC 59 31196626 31199557 ATATCTCGGGATCCTCCAG 59 NA Mus musculus 50 Setd1a ENSMUSG00000042308 ENSMUST00000047075,ENSMUST00000047157 2 2 2 81 7 134922103 134923907 TCCTAAGTTTAAGCTGGATGAG 59 134923949 134923967 CACATTGTCATTGAGCCTC 58 NA Mus musculus 50 Dlgap3 ENSMUSG00000042388 ENSMUST00000046659,ENSMUST00000106094,ENSMUST00000106092 3 3 3 106 4 126911166 126911184 GTGGTTCATCAAGATGCTG 58 126911254 126912220 TCTCTAAGATCTCCTCGGG 59 NA Mus musculus 50 Olfr855 ENSMUSG00000043087 ENSMUST00000061693 1 1 1 60 9 19389036 19389054 AGATGATGCAGAACTTCAG 57 19389075 19389096 GGTGACTAAGTATATGAACAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 3222402P14Rik ENSMUSG00000043154 ENSMUST00000066773,ENSMUST00000075941 3 2 3 80 9 101046692 101046710 AGGGAAGAATGAGCTATGC 59 101029392 101046648 AGTACTCAATGCTGGTAGG 58 NA Mus musculus 50 Aqp5 ENSMUSG00000044217 ENSMUST00000042340,ENSMUST00000088200 3 2 2 88 15 99423729 99423747 TGGTCATGAATCGGTTCAG 59 99424603 99424623 AGTAGAAGTAGAGGATTGCAG 58 NA DesignNoJunction Mus musculus 50 Cxxc4 ENSMUSG00000044365 ENSMUST00000053048 3 1 1 249 3 133903563 133903581 AAGAGGCTCATCAACTGTG 59 133921131 133921149 TTCAATGGTGGACTAAGCG 59 NA DesignNoJunction, InUTR Mus musculus 50 Hjurp ENSMUSG00000044783 ENSMUST00000065420 1 1 3 145 1 90173851 90173957 ATAGCGAAGTACAACCAGC 59 90164588 90171621 CTCTTCTCTGCGTTCTGAG 59 NA Mus musculus 50 Olfr610 ENSMUSG00000045584 ENSMUST00000063109 3 1 1 60 7 110654803 110654821 CGGTGCTAATTCTCCTCTC 59 110654761 110654779 TTAGAAGCAATGCTCAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ifit2 ENSMUSG00000045932 ENSMUST00000102826 2 1 1 87 19 34644850 34647564 GCAGTCATGAGTACAACGA 59 34647614 34647633 CTTCTGCTATCAGGTTCCAG 59 NA InUTR Mus musculus 50 Zfp62 ENSMUSG00000046311 ENSMUST00000109198,ENSMUST00000109195,ENSMUST00000109197,ENSMUST00000061757 1 4 4 60 11 49029867 49029888 GGAGAAAGACCTTATGTATGTG 58 49029908 49029927 TGAGACCTGAATTGTTCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Defb14 ENSMUSG00000046354 ENSMUST00000052601 2 1 1 60 8 19195126 19195144 TGTGCTGTACTTAACTGCC 59 19195167 19195186 GACCGCTATTAGAACATCGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lcn10 ENSMUSG00000047356 ENSMUST00000058912 3 1 1 108 2 25540568 25540588 CAGAACATCTCTAGCTTCCTG 59 25540658 25541090 TATGTGCACAGGAATCGTC 59 NA Mus musculus 50 Cltb ENSMUSG00000047547 ENSMUST00000049575 2 1 2 107 13 54698436 54700097 CAAGATCAACAACAGGATCG 58 54695365 54695384 TCCTCCTTGGATTCTTTCAC 59 NA Mus musculus 50 Zfp454 ENSMUSG00000048728 ENSMUST00000109131 3 1 3 118 11 50699920 50699938 CTACTCAATGCTCCTCAGC 59 50687739 50687757 CAGGGATATCTGCCTTGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Rgag4 ENSMUSG00000049191 ENSMUST00000056556,ENSMUST00000113631 2 2 2 60 X 99265312 99265331 CGAAAGGAACTCTTATGGTC 57 99265271 99265289 CACACTCAAGAATCAGCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sall2 ENSMUSG00000049532 ENSMUST00000058326 3 1 1 60 14 52933717 52933735 GGCACTGCTTACTAATCAC 58 52933675 52933694 TTCTAGCACATAAGGGAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 4932442E05Rik ENSMUSG00000050709 ENSMUST00000059966 2 1 1 60 10 118298287 118298305 GTCCCTGTTAACCCATTCC 59 118298328 118298347 AGATGTGACTTTGTTCACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cdr2l ENSMUSG00000050910 ENSMUST00000053288 1 1 1 135 11 115251929 115252186 GAGATCGAGTACTTGACCA 58 115252285 115252303 CCTTACTCTCCATCACCAG 58 NA Mus musculus 50 Zfp438 ENSMUSG00000050945 ENSMUST00000063989 1 1 1 150 18 5213235 5213253 TATTTCGGCCATCTGAAGG 59 5211183 5213121 TTGACTTGGTTTCCCTCTC 59 NA Mus musculus 50 Foxd4 ENSMUSG00000051490 ENSMUST00000058600 1 1 1 65 19 24975262 24975280 CAGTCCTCTAAGTTCCGAC 59 24975215 24975233 TCTCCATCTTCCTCCTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pcdhb1 ENSMUSG00000051663 ENSMUST00000052366 1 1 1 60 18 37426892 37426911 TTCCTTATCTCAGCCTTGTC 59 37426934 37426952 CTCACTATTCCCAGTTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pld4 ENSMUSG00000052160 ENSMUST00000063888 3 1 1 80 12 114006063 114006081 CCATGTTCGCTTATCTGAG 57 114006124 114006248 CGATGAAGACTTTCACATCC 58 NA Mus musculus 50 EG207157 ENSMUSG00000052236 ENSMUST00000064002 2 1 1 117 6 101746704 101746723 TGCTTGTATAAAGTCCACAC 57 101746802 101751572 CCCTGTGTATCCAAATTACC 57 NA Mus musculus 50 Zdhhc19 ENSMUSG00000052363 ENSMUST00000064192 1 1 1 80 16 32497307 32497667 CTTCGGATTCCCTTGTAGG 59 32497711 32497729 GTGAGGATGAAGAGTGGTC 59 NA Mus musculus 50 Mogat2 ENSMUSG00000052396 ENSMUST00000064231 2 1 1 135 7 106381076 106381094 CTTCTCTGTCCTGTATGCC 59 106372207 106380977 CTTGACCAAAGAGACAGGG 59 NA Mus musculus 50 Arl13a ENSMUSG00000052549 ENSMUST00000064476 3 1 1 81 X 130738208 130738228 CCAATATGAGCATCTCAACCT 59 130738269 130739937 CTGACTCTGTTAGGTAAGCTG 59 NA Mus musculus 50 Cyp2j6 ENSMUSG00000052914 ENSMUST00000030303 3 1 1 93 4 96192591 96192609 GGATGGGCAATATCATCCC 59 96190519 96192535 AGAACCATTGTACCCTTTGG 59 NA Mus musculus 50 Bcl3 ENSMUSG00000053175 ENSMUST00000065454 1 1 1 115 7 20396472 20396676 ATGCAGTGGATATCAAGAGC 59 20394983 20395001 ATACATCTGAGCGTTCACG 59 NA Mus musculus 50 Nrd1 ENSMUSG00000053510 ENSMUST00000102736,ENSMUST00000106644,ENSMUST00000065977 3 3 3 87 4 108731597 108731615 GTCTACCCAACCTGTAGGA 59 108731664 108732387 CAGTTTCGGAGTTGTATTTGG 59 NA Mus musculus 50 ENSMUSG00000053739 ENSMUSG00000053739 ENSMUST00000066340 2 1 1 60 10 57716867 57716885 TCTGATCCTTCAGGAACAG 58 57716825 57716843 CAGAAGGAATTTGGTCCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000054453 ENSMUSG00000054453 ENSMUST00000067529,ENSMUST00000086165 2 2 2 82 X 9570153 9570171 CACCATCTGGGACAAAGAG 59 9570217 9571538 CGTAGCTCATACCACTTCC 59 NA Mus musculus 50 2610204G22Rik ENSMUSG00000054514 ENSMUST00000067628 3 1 1 62 4 155135878 155135899 GTTACTTAGGTCAGAGACTTGG 59 155135922 155135940 CAATCGTAGCAGAATGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Dnajc13 ENSMUSG00000054574 ENSMUST00000060084 2 1 1 80 9 104133020 104133039 ACAGAAACATGCTTAGTGGA 59 104132420 104132979 CAATGCAAATACTTCTCCCAG 59 NA Mus musculus 50 Fsd1l ENSMUSG00000054752 ENSMUST00000059942,ENSMUST00000107643 1 2 2 80 4 53660603 53660622 TGGATGATGTAAAGGAAAGC 57 53660665 53662673 TGAGCTGACTCTGTAACTC 58 NA Nonspecific Mus musculus 50 Nfic ENSMUSG00000055053 ENSMUST00000105319 3 1 5 247 10 80871083 80871101 GAGCTGATCCAAGTGTCTC 59 80866124 80866142 TAATCCCACAAAGGGACTG 58 NA DesignNoJunction Mus musculus 50 ENSMUSG00000055099 ENSMUSG00000055099 ENSMUST00000068485 2 1 1 60 7 103106992 103107013 GATTTGTGCTATTGCTATTCCC 59 103107033 103107052 GAAACAAGATTCAGGGTGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 C1r ENSMUSG00000055172 ENSMUST00000068593,ENSMUST00000074590 2 2 2 136 6 124469440 124469748 GGTGCAAGATCAAGAACTG 58 124469846 124469866 GGTCAGCATCTTGTAATATGG 58 NA DesignRelaxed Mus musculus 50 Magea3 ENSMUSG00000055816 ENSMUST00000067254,ENSMUST00000079867 3 2 2 74 X 151383211 151383229 TTACAGTTCTTTGCCAGCA 59 151383155 151383173 ATCTTGTAAAGCCTCTGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG194588 ENSMUSG00000055942 ENSMUST00000069740 2 1 1 139 7 15249798 15249816 AAGAACGCATTGTGTACTC 58 15249918 15250625 GAACCATTTCTTGATCTCCA 57 NA Mus musculus 50 Car10 ENSMUSG00000056158 ENSMUST00000042943,ENSMUST00000107861,ENSMUST00000107859,ENSMUST00000107863 1 4 5 99 11 92961590 93046403 CTGCATATCAGCTCAACAG 58 93046466 93165832 CCAGAAAGAAGGAACTGGA 58 NA Mus musculus 50 Spock1 ENSMUSG00000056222 ENSMUST00000070209 2 1 1 93 13 58008817 58008835 CCTAGACAATGACCAGTGG 59 57797505 58008763 GAAATAGTCATCCTGAATCCCA 59 NA Mus musculus 50 Olfr315 ENSMUSG00000056959 ENSMUST00000081533 3 1 1 60 11 58592395 58592415 CATCTTCATCTACATGAGACC 57 58592437 58592455 AGACACCACTTTGTCACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr948 ENSMUSG00000057349 ENSMUST00000076516 1 1 1 60 9 39127047 39127066 GATGATTGCATTGATTGGGA 58 39127006 39127025 GCTGAGGAAATAGTACATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr695 ENSMUSG00000057832 ENSMUST00000080925 2 1 1 60 7 113858172 113858190 GAAGTCTTCAACTCCACCT 58 113858130 113858149 CACTGTCATTCAGAATTCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 V1rg12 ENSMUSG00000058132 ENSMUST00000072801 1 1 1 60 7 12890311 12890332 CCAACTCCTTGTCTATTATCTC 57 12890353 12890371 TTCATCCCAAATTCTGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Syt17 ENSMUSG00000058420 ENSMUST00000081574 2 1 1 60 7 125553547 125577354 GTTCTCAGAATGAAGTGGAG 57 125553506 125553527 GCACTTGGGAGATAATTTAGAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000058570 ENSMUSG00000058570 ENSMUST00000081331 3 1 1 82 14 8589612 8597306 CTCAGATGACTTTGCAGGA 59 8589548 8589567 CAGATGTTCCATTCTTGCAG 59 NA Mus musculus 50 Cep350 ENSMUSG00000058942 ENSMUST00000094446,ENSMUST00000078888 1 2 2 80 1 157800336 157800355 TTAATGTTGACAACTCGGTG 58 157791334 157800294 GGTTGAAACCTTTGTATGCT 58 NA Mus musculus 50 OTTMUSG00000010328 ENSMUSG00000059218 ENSMUST00000105769,ENSMUST00000075045 3 2 2 80 4 143400756 143401416 TTATAGAATGTCTCAGGTGCC 59 143400696 143400714 CCAAGTCTGACTGTGAGAG 59 NA Nonspecific Mus musculus 50 EG546038 ENSMUSG00000059463 ENSMUST00000039075,ENSMUST00000110767 3 2 2 60 8 19141401 19141419 ACTTAGTCACTGAACCTCC 58 19141443 19141461 CCATTTACTCCTCGAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hydin ENSMUSG00000059854 ENSMUST00000043141,ENSMUST00000051865 1 2 2 80 8 112858706 112878861 TTATGACACAGGTGAAATGG 57 112878904 112878922 AACGAATTCTTGTCCAGTC 57 NA Mus musculus 50 Olfr60 ENSMUSG00000060112 ENSMUST00000075470 3 1 1 60 7 147531804 147531823 CCTAGTCTAAGACTGTTCCT 57 147531763 147531784 CCATTAGAGCCATTACATAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr151 ENSMUSG00000061165 ENSMUST00000072430 1 1 1 60 9 37537812 37537832 AGCTGTGTTGTTCTATGGA 58 37537770 37537788 GGAACTAGCTGTAGAAGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr50 ENSMUSG00000061900 ENSMUST00000112948 2 1 2 101 2 36649588 36649606 GTACACTGTGGTTACACCC 59 36649670 36649881 AAATACAGTCTCCTGCTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pvrl2 ENSMUSG00000062300 ENSMUST00000075447,ENSMUST00000108450 3 2 2 139 7 20318368 20318387 ACTATCATCAGCCGATACTC 58 20316063 20318266 GATACTTCTGGAGGGTAGC 58 NA Mus musculus 50 Krtap16-8 ENSMUSG00000062400 ENSMUST00000074637 1 1 1 96 16 89047974 89047992 TATGGCTCCTACTATGGCT 59 89047896 89047914 CATAGCCACAGCCATAGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000062561 ENSMUSG00000062561 ENSMUST00000079279 2 1 1 60 10 63389686 63389705 CATAAGTCGAGACTCATCCA 58 63389645 63389664 AAAGCAGTTCAAACCATCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr114 ENSMUSG00000062629 ENSMUST00000076914 3 1 1 60 17 37726875 37726894 ATCATGTGTCCCAGAAAGTG 59 37726834 37726852 GAATACTGCTGCTTAGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 9430002A10Rik ENSMUSG00000062704 ENSMUST00000074808 3 1 1 61 8 90698625 90698643 CTTCATAGCAATGGAAGCC 58 90698668 90698686 CCTATCAACAGCAATACCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ppox ENSMUSG00000062729 ENSMUST00000073120 3 1 1 81 1 173210567 173210586 CGATCTTTGAACTTGGACCT 59 173210373 173210523 CCAAGTTCAGAAACCAGGA 59 NA Mus musculus 50 1810041L15Rik ENSMUSG00000062760 ENSMUST00000080751,ENSMUST00000089026 2 2 2 87 15 84237185 84247540 TACATGCACAACAACTACAC 58 84237117 84237135 AATAGAGCAGATCCAGGAC 58 NA Mus musculus 50 Olfr1355 ENSMUSG00000062873 ENSMUST00000078414 3 1 1 60 10 78342487 78342506 GTTCAGACAGCTTATCAAGC 58 78342529 78342547 ATGGCTCCCAATAGAACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ica1 ENSMUSG00000062995 ENSMUST00000115521 2 1 3 175 6 8608302 8620701 CGTTAAAGAGCTTACAAGACC 58 8603510 8603532 CCCGTCTAATAGTTCATCTATGG 59 NA Mus musculus 50 Lrrc43 ENSMUSG00000063409 ENSMUST00000094327 2 1 1 86 5 123950372 123950390 GTGGAAGATGAGGACATGG 59 123950440 123951037 ATGCTTGTCGATCTCATCC 59 NA Mus musculus 50 Lin28b ENSMUSG00000063804 ENSMUST00000099847 3 1 4 94 10 45178699 45188850 TACACCAACTGTTTCCTCC 59 45178623 45178641 TGATTCAATGAAGTGGCCT 59 NA InUTR Mus musculus 50 4430402I18Rik ENSMUSG00000064202 ENSMUST00000025872,ENSMUST00000112602 3 2 2 80 19 29012901 29013635 CGAACATAAAGGTTATCCGA 57 29012840 29012859 ACTCACTTGAATCTACAGGT 57 NA Mus musculus 50 mmu-mir-9-3 ENSMUSG00000065545 ENSMUST00000083611 2 1 1 62 7 86650176 86650194 CTAGCTGTATGAGTGCCAC 59 86650218 86650238 GAGAGTCATTTCTACTTTCGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000010694 ENSMUSG00000066007 ENSMUST00000092750,ENSMUST00000116264,ENSMUST00000105727 2 3 3 60 4 146157697 146160728 GTGTCTATTAACCTTCAAGGAC 58 146160749 146160767 GAGACATTCCCATTCCTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Gm854 ENSMUSG00000066964 ENSMUST00000086615 3 1 1 199 5 113663544 113663562 CTTTGGGTCATTGAAGGAC 58 113667051 113667069 GACCTACAAGCATGGAGAC 59 NA DesignNoJunction Mus musculus 50 Mrgpra4 ENSMUSG00000067173 ENSMUST00000087092 2 1 1 60 7 55236732 55236750 TGTCATTTCTTTGGTCCCA 59 55236690 55236708 TAAAGAAGTTCGTTGCCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000016571 ENSMUSG00000067480 ENSMUST00000108947 3 1 3 80 2 177291675 177291694 ATCCTTCTCAGAAGAGTCTC 57 177291734 177291962 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 Aup1 ENSMUSG00000068328 ENSMUST00000092618 3 1 1 144 6 83006122 83006367 TGTATCAAGTAAGGTGGCT 57 83006582 83006600 ATGTGTTCTGCTTTGTCTG 58 NA Mus musculus 50 Reg3d ENSMUSG00000068341 ENSMUST00000089667 3 1 1 80 6 78326443 78326461 ATAACTGGGAGATACCACC 57 78326121 78326399 ACTTCTGATAACCTGAGGC 58 NA Mus musculus 50 Cep152 ENSMUSG00000068394 ENSMUST00000089776 3 1 1 82 2 125412121 125412139 AACTCTGAAGACGGAAAGG 59 125409791 125412075 TTTGTCTGCTCTCCTTCTC 58 NA Mus musculus 50 Zfp748 ENSMUSG00000069204 ENSMUST00000053289 2 1 2 67 13 67647595 67647613 GAATCTGTACAGGGACGTG 59 67646341 67647564 TAGAGAAAGCAAGACCCAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000069765 ENSMUSG00000069765 ENSMUST00000092790 3 1 1 73 11 89862015 89862033 AGGAAATGAGTTGGTTGGT 59 89861960 89861978 TAAGAAACAAGTGTGGGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Es31 ENSMUSG00000069922 ENSMUST00000093223,ENSMUST00000093222 2 2 2 83 8 107579547 107580289 ATTAGCCCATATGCAACTG 57 107580336 107580354 GTAGCTGATTCATCTGAGC 57 NA Mus musculus 50 Capza1 ENSMUSG00000070372 ENSMUST00000094028 3 1 1 80 3 104643787 104643807 CATTTGCCCAGTATAACATGG 59 104642888 104643748 CATGCTCTGTAATTAAGACCTG 58 NA Nonspecific Mus musculus 50 6330408A02Rik ENSMUSG00000070814 ENSMUST00000108532 2 1 2 74 7 13846231 13846250 CCTCAGAGGGTGTTAATGG 59 13846175 13846193 TCTCTTTCTCCATCCTTGC 58 NA DesignNoJunction Mus musculus 50 Olfr1116 ENSMUSG00000070854 ENSMUST00000090717 1 1 1 60 2 87149339 87149357 TGTGTTTACAGCTGGTAGC 59 87149381 87149399 GTCTGCCCAATTTGTACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ccin ENSMUSG00000070999 ENSMUST00000095107 1 1 1 60 4 43996525 43996544 AACAGAGGAAGCGTAAAGAG 59 43996566 43996585 AAGAAGACATGATGGTCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zhx2 ENSMUSG00000071757 ENSMUST00000096430 1 1 1 80 15 57594261 57652591 CACAGCAGACACTGATAGG 59 57652634 57652653 TCAGAAGGATTTCAGCACAG 59 NA InUTR Mus musculus 50 ENSMUSG00000072936 ENSMUSG00000072936 ENSMUST00000101200 2 1 1 169 5 54741294 54741312 TTTCAGCCTTGAAGAGTGG 59 54743784 54746325 ATTCTTGTAGCTCCTTCACC 59 NA InUTR Mus musculus 50 ENSMUSG00000073129 ENSMUSG00000073129 ENSMUST00000101490 2 1 1 60 5 23957126 23957144 GTTTCACTCAAGAGACCCT 58 23957084 23957103 CACTGGGAGATAAGAATTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 2410018L13Rik ENSMUSG00000073164 ENSMUST00000101544 1 1 1 106 12 23007792 23007810 GAACTTCACTCGGGAAGAG 59 23007877 23008100 AAGTGTAGCCTATAACAGTGAG 59 NA Mus musculus 50 ENSMUSG00000073778 ENSMUSG00000073778 ENSMUST00000097928 3 1 1 60 7 151766845 151766864 CACTTCGAAGACAACATCAC 59 151766887 151766905 TGTGCTACTTAGTGTCAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr594 ENSMUSG00000073954 ENSMUST00000098205 2 1 1 60 7 110368338 110368357 AGTGTATCTGATTGCTCTCC 58 110368379 110368398 GCTCTCAGTCTTAATCACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cox7a1 ENSMUSG00000074218 ENSMUST00000098594 2 1 1 79 7 30970133 30970151 CTCATCTACCAGAAGCCAC 59 30970297 30970315 GTACTGGGAGGTCATTGTC 59 NA DesignNoJunction Mus musculus 50 EG433632 ENSMUSG00000074388 ENSMUST00000098828 1 1 1 60 3 97770450 97770470 ACTCGATAGTTAAGCTTCAGG 59 97770492 97770510 TCAGAAGCTCTGAAAGGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074477 ENSMUSG00000074477 ENSMUST00000098943 3 1 1 75 8 10006890 10006910 ATATCTTCTCCTTTCTCGGAG 58 10006835 10006853 CTCGTGGAATGGATGAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hspa12b ENSMUSG00000074793 ENSMUST00000099349,ENSMUST00000100763 3 2 2 179 2 130959848 130961539 GCTGTATATCAGCTCTAGCC 59 130962728 130962746 GATGTGGTTCCAAAGTCGA 59 NA Mus musculus 50 Fjx1 ENSMUSG00000075012 ENSMUST00000099678 2 1 1 60 2 102290850 102290869 ATCCTCTTCGATTACCTGAC 58 102290809 102290827 GTAAGCTGAAGAGGTTGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1080 ENSMUSG00000075178 ENSMUST00000111580,ENSMUST00000099881 1 2 2 80 2 86393598 86393616 CTCATAGCTGTTCTCAGGA 58 86393536 86393554 AACTACTGTCAGGTGTGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000013301 ENSMUSG00000075279 ENSMUST00000100003 1 1 1 60 2 74429865 74429885 CTAACTTCTTCATTCAGCTGG 58 74429825 74429843 AACTGCACGGTATCTTCAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRBV21 ENSMUSG00000076477 ENSMUST00000103278 2 1 1 60 6 41152623 41152755 CTGGACATCAATCCATGGA 59 41152779 41152797 TTTCCTTTGACCAGATGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV1 ENSMUSG00000076758 ENSMUST00000103567 1 1 1 60 14 53048431 53048449 ATGGTTTGAAGGACAGTGG 59 53048473 53048491 TAACTGTACCCATTCGAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV2 ENSMUSG00000076759 ENSMUST00000103568 1 1 1 71 14 53187000 53187449 GATCTTGGTCTCATGGAGC 59 53187484 53187502 ACTTCTTGCCCTTCATAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-582 ENSMUSG00000076946 ENSMUST00000103758 1 1 1 60 13 110114945 110114963 GGATACAGTTGTTCAACCA 57 110114987 110115005 GGTTCAGTTGTTCAACAGG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Ccl27 ENSMUSG00000078734 ENSMUST00000108004,ENSMUST00000108003 2 2 3 60 4 42349474 42349495 CTGTACTCAGCTCTATAGACAG 58 42349435 42349453 CATGTGGACAATCCTCCTC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Zfp456 ENSMUSG00000078995 ENSMUST00000057070 2 1 1 60 13 67467630 67467648 CATCAAACCCTTCACTCTG 58 67467588 67467606 AGAAACATCTGCCACAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 AY761185 ENSMUSG00000079120 ENSMUST00000110758 2 1 1 147 8 22083642 22084229 TTCAAGTTTCAGGCCTAGG 59 22083513 22083531 GACCTTTGGTGACAATTGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Klrb1b ENSMUSG00000079298 ENSMUST00000032472 2 1 1 80 6 128769076 128770291 ATACAACAGGTTGTTCAGC 57 128769014 128769032 CTTGAGAAACGTGAAAGCA 58 NA Mus musculus 50 Neu2 ENSMUSG00000079434 ENSMUST00000070898 1 1 1 103 1 89491627 89491645 GAAGAGGAAGCTACAACGA 59 89493160 89493178 GGGACATGGATTCATGGAG 59 NA DesignNoJunction Mus musculus 50 Cflar ENSMUSG00000079551 ENSMUST00000097723 3 1 1 213 1 58768388 58768406 GAAGTCTCTGAGACCTGAG 58 58770286 58770304 TTCAGGAATGAGATGCGAC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 6330578E17Rik ENSMUSG00000080025 ENSMUST00000116141 1 1 1 60 1 37474921 37474939 AACCACCATTCTCTTTCCT 58 37474879 37474897 GTCCACATATACCAGGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tom1l2 ENSMUSG00000000538 ENSMUST00000102683,ENSMUST00000093048,ENSMUST00000093046 3 3 8 130 11 60046453 60055331 AACTCAGAAATGATTCCCG 57 60043722 60043740 TCTTCCAGGAACTTATCGA 57 NA Mus musculus 50 Col18a1 ENSMUSG00000001435 ENSMUST00000081654,ENSMUST00000072755,ENSMUST00000105409 2 3 3 105 10 76548013 76548031 CGCGGTAGATTCTATAGGA 57 76543601 76543904 CATACCTCCCTTTATCAAGC 57 NA Mus musculus 50 Klhl10 ENSMUSG00000001558 ENSMUST00000001599,ENSMUST00000107395 2 2 2 85 11 100309045 100317610 ATGGGAAGGTCTACATATGTG 58 100317657 100317675 CCATTGATTGCTCTCAGTG 58 NA Mus musculus 50 Folr1 ENSMUSG00000001827 ENSMUST00000106983,ENSMUST00000001882,ENSMUST00000106985,ENSMUST00000106982,ENSMUST00000106986 1 5 6 80 7 109008065 109012453 AATTTACACGACCAGTGCA 59 109008003 109008022 AATGTCCTTATGTGCTTCCT 59 NA Mus musculus 50 Nr1h3 ENSMUSG00000002108 ENSMUST00000111356,ENSMUST00000111354,ENSMUST00000111355,ENSMUST00000002177,ENSMUST00000111358 3 5 5 131 2 91032892 91033784 TGTTTCTCCTGATTCTGCA 58 91032779 91032797 CCTATCCCTAAAGCAACCC 59 NA Mus musculus 50 Slc9a3r2 ENSMUSG00000002504 ENSMUST00000002572,ENSMUST00000019684 1 2 3 170 17 24778799 24778817 CTGATGAACACTTCAAGCG 59 24777325 24777548 TACTGCCATCCTCATTGTC 59 NA Mus musculus 50 Slc9a3r2 ENSMUSG00000002504 ENSMUST00000002572,ENSMUST00000019684 2 2 3 171 17 24777330 24777553 AGAAGGACAATGAGGATGG 58 24777177 24777196 CAGAAGTTGCTGAAGATCTC 58 NA Mus musculus 50 Gtf2f1 ENSMUSG00000002658 ENSMUST00000002733,ENSMUST00000066446 1 2 2 82 17 57147186 57147204 TGTCCTAAAGGAGTTTCGG 58 57146566 57147141 TAATGCCTTTGAACTTCCGT 59 NA Mus musculus 50 Lipe ENSMUSG00000003123 ENSMUST00000003207,ENSMUST00000108406,ENSMUST00000054301 3 3 3 105 7 26169867 26169885 ACAGTTACCATCTCACCTC 58 26169665 26169683 TGTTGAGTACCTTGCTGTC 59 NA DesignNoJunction Mus musculus 50 Ikbkg ENSMUSG00000004221 ENSMUST00000114128,ENSMUST00000004330,ENSMUST00000114129,ENSMUST00000114133,ENSMUST00000114130,ENSMUST00000114127,ENSMUST00000064407 3 7 7 82 X 71688760 71688778 ATAAGCTGAAAGAGGAGGC 59 71688824 71689125 CTTGTAGATATCCGCCTGG 59 NA Mus musculus 50 Ly9 ENSMUSG00000004707 ENSMUST00000068878,ENSMUST00000004827,ENSMUST00000111277 1 3 3 127 1 173530037 173531120 TGTCTACAAGAGACTGGAG 57 173529928 173529946 GCATCCATGTGTATGTCAC 58 NA Mus musculus 50 Eif2ak4 ENSMUSG00000005102 ENSMUST00000005233,ENSMUST00000102527,ENSMUST00000110874,ENSMUST00000110872,ENSMUST00000110875,ENSMUST00000110870 3 6 8 80 2 118283563 118283581 CAGAGAAGCTGACTAGGAG 58 118283625 118287478 TGTAGAGTCTACACAGGCT 59 NA Mus musculus 50 AA536749 ENSMUSG00000005417 ENSMUST00000066330,ENSMUST00000072031,ENSMUST00000108750 1 3 8 80 11 59585192 59589023 CATCAGGTCCAAGAGTCTG 59 59589067 59589085 TCTTTCTTCAAGTCCCTGG 58 NA Mus musculus 50 Psmd4 ENSMUSG00000005625 ENSMUST00000107237 2 1 2 159 3 94838508 94838527 GTTTGGAGTAGATCCCAGTG 59 94837676 94837847 GTCATCCGAGTCTTCAGTC 59 NA Mus musculus 50 BC003331 ENSMUSG00000006010 ENSMUST00000111913,ENSMUST00000006167,ENSMUST00000094477 1 3 4 92 1 152229459 152229477 TAGACTGTACTGTTCACGT 57 152228712 152229404 GTGTAAGTCCACTCTTTGTG 58 NA Nonspecific Mus musculus 50 Prg4 ENSMUSG00000006014 ENSMUST00000111902 1 1 3 82 1 152307892 152312636 CATCTCAAGAGCTCTCCTG 59 152307828 152307846 TTTACACTGGGAGTCACAG 58 NA Mus musculus 50 Ndor1 ENSMUSG00000006471 ENSMUST00000114349,ENSMUST00000100329,ENSMUST00000114342,ENSMUST00000006640 2 4 4 84 2 25110441 25110459 GAATCTCATTAGGGAGCCC 59 25107330 25110395 CCAGAAGTTCTTCATGTTGTC 59 NA Mus musculus 50 Hfe ENSMUSG00000006611 ENSMUST00000091706,ENSMUST00000091707,ENSMUST00000095678,ENSMUST00000006787 1 4 4 84 13 23797519 23797537 TGGTTGGAATTCTGTTCCT 58 23796256 23796275 CACTCACAGTCTGTTAAGAC 57 NA DesignNoJunction Mus musculus 50 Elavl2 ENSMUSG00000008489 ENSMUST00000107120,ENSMUST00000107111,ENSMUST00000107109,ENSMUST00000107118,ENSMUST00000084426,ENSMUST00000107110,ENSMUST00000107116,ENSMUST00000102799,ENSMUST00000078179,ENSMUST00000008633,ENSMUST00000107124,ENSMUST00000107114,ENSMUST00000107113 2 13 13 122 4 90930777 90930795 AAACTTATACGTCAGCGGG 59 90927668 90930691 CTTGATATGCCAGTGACCT 59 NA Mus musculus 50 Elavl2 ENSMUSG00000008489 ENSMUST00000107116,ENSMUST00000008633,ENSMUST00000107124,ENSMUST00000107114 2 4 13 108 4 90920257 90920847 CTTATGGAGTGAAGAGTAGGT 58 90920169 90920187 TACACAAATATGCACCAGC 58 NA Mus musculus 50 Nfib ENSMUSG00000008575 ENSMUST00000107246,ENSMUST00000107250 1 2 8 84 4 81973681 81973701 CTGAATCCTCAGGATACTCTG 59 81956280 81973635 AGTCACAAATCCTCAGCTG 59 NA Mus musculus 50 Zfp715 ENSMUSG00000012640 ENSMUST00000012796,ENSMUST00000107986,ENSMUST00000048015,ENSMUST00000086011 1 4 4 66 7 50556997 50557015 GATGCTGGAGATCTACAGC 59 50556604 50556622 AAAGATGACTCCAGGACTG 58 NA DesignNoJunction Mus musculus 50 Adam28 ENSMUSG00000014725 ENSMUST00000089195 1 1 3 60 14 69272255 69272274 CAACAAACTGTTCCTACTCC 58 69272214 69272232 TTTACATCTCTTGCTGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gorasp2 ENSMUSG00000014959 ENSMUST00000112209 1 1 4 90 2 70526449 70526467 CAACTGTACCATTGTTGCC 59 70526518 70549106 CAGTATAACCTTGGTAATGTGG 58 NA Mus musculus 50 Oc90 ENSMUSG00000015001 ENSMUST00000110101 1 1 4 132 15 65719190 65720986 AACACTGTTGCCTAGAGTG 59 65714187 65715387 AATCTCTGCAGATCCTGGA 59 NA Mus musculus 50 Col20a1 ENSMUSG00000016356 ENSMUST00000108856,ENSMUST00000108855,ENSMUST00000080705,ENSMUST00000076420,ENSMUST00000108854,ENSMUST00000108852,ENSMUST00000094213 2 7 7 98 2 180735739 180735931 AGAAATCGATCTCTGTACCAG 59 180735991 180736009 CTCTGTAGACAGCTGAGAC 58 NA Mus musculus 50 Zfp207 ENSMUSG00000017421 ENSMUST00000053740,ENSMUST00000017567 3 2 3 101 11 80208671 80208689 GTAATCCACCAGTTGGACC 59 80208754 80208900 CATACTGACCATGAGGTGG 59 NA Mus musculus 50 Crhr1 ENSMUSG00000018634 ENSMUST00000093925,ENSMUST00000093924 2 2 3 81 11 104020672 104025124 CTACAACACCACAAACAATGG 59 104025165 104025185 CTGGCACTCAGAATAATTCAC 59 NA Mus musculus 50 Ush1g ENSMUSG00000018862 ENSMUST00000019006 2 1 2 104 11 115202277 115202295 CCACAAACTTGCTGATGTG 59 115202360 115205557 ACTGAAGAACTGAGAACTTCTC 59 NA Mus musculus 50 Trdn ENSMUSG00000019787 ENSMUST00000050626 3 1 2 112 10 32915829 32915847 AAAGTGAAACCAACAGCTG 58 32915922 32919978 GCATACTGATCTTTCTGCTC 58 NA Mus musculus 50 Aig1 ENSMUSG00000019806 ENSMUST00000105534 1 1 2 93 10 13373458 13373476 TTCTTTGGGTCAACAACCA 59 13367504 13373406 CTTCTATACTTCTCTGTGTATCCC 59 NA Mus musculus 50 Rtn4 ENSMUSG00000020458 ENSMUST00000102843,ENSMUST00000102841 1 2 5 80 11 29608706 29608726 TGATACAGAGAAAGAGGACAG 58 29608768 29633648 TACAGGAGGTCAACAACTG 58 NA Mus musculus 50 Ntsr2 ENSMUSG00000020591 ENSMUST00000111064,ENSMUST00000020910 2 2 2 124 12 16665247 16666518 TGATGGATGGACTGATGAG 58 16666606 16666624 TTCTGAAGGAGGAAGACAC 58 NA Mus musculus 50 Ncoa1 ENSMUSG00000020647 ENSMUST00000085814 2 1 2 132 12 4259226 4259244 ATGCCAGGGATGAATACTG 59 4249881 4253665 TCTTCTTGTCCTGGTTTCC 59 NA Mus musculus 50 Tlk2 ENSMUSG00000020694 ENSMUST00000106939,ENSMUST00000106936,ENSMUST00000106941,ENSMUST00000015107 2 4 6 108 11 105140532 105142410 AAGCAAAGGCATTTATCAGG 58 105142481 105142499 ACTGACTTTCGGATGTGAG 59 NA Mus musculus 50 Ccdc46 ENSMUSG00000020728 ENSMUST00000061287,ENSMUST00000106724,ENSMUST00000100297,ENSMUST00000106718,ENSMUST00000106715,ENSMUST00000106717,ENSMUST00000106714,ENSMUST00000106716 1 8 8 87 11 108669976 108669994 GAACTAGAAACCCGCTCTC 59 108670044 108717106 TGTACATTATCTGCTCCTGC 59 NA Mus musculus 50 Unk ENSMUSG00000020770 ENSMUST00000106452 2 1 2 112 11 115914336 115914355 CCTTAAGTGATGATGTGCAG 58 115914430 115914818 ATTCCTACAGAGGAGAGGG 59 NA Mus musculus 50 Srp68 ENSMUSG00000020780 ENSMUST00000106425 1 1 2 118 11 116135261 116135279 AAGGCAAACAAAGAGTTCG 58 116126855 116133233 AGCAGCAAGTATCTGTACC 59 NA Mus musculus 50 Slc46a1 ENSMUSG00000020829 ENSMUST00000001126,ENSMUST00000116356 1 2 2 61 11 78280674 78280692 GTTTGCTACCATTACACCC 58 78282138 78282156 TGACCAATGACAGGAAGAG 58 NA DesignNoJunction Mus musculus 50 Cacna1g ENSMUSG00000020866 ENSMUST00000107786 2 1 14 82 11 94321132 94323219 TCTTCTCATCATCTTCTCTGAG 58 94321071 94321089 TAGCATTGGACAGGAATCG 59 NA Mus musculus 50 Dlg4 ENSMUSG00000020886 ENSMUST00000108586 2 1 5 141 11 69837602 69840431 TGTCTCTGCGTGAAATACC 59 69843946 69844106 CCTGCAACTCATATCCTGG 59 NA Mus musculus 50 Acly ENSMUSG00000020917 ENSMUST00000100457,ENSMUST00000107387 3 2 5 85 11 100380476 100380940 GGACAAGAAAGAGGTCCTG 59 100380409 100380428 GGTTGATCTCAAGGTAGGTG 59 NA Mus musculus 50 Ubtf ENSMUSG00000020923 ENSMUST00000107121,ENSMUST00000107119,ENSMUST00000006754,ENSMUST00000107117,ENSMUST00000107115 2 5 7 117 11 102172776 102172796 TATCCAGAATGCCAAGAAGTC 59 102171876 102172697 GTCCCGCATAATCTCATCC 59 NA Mus musculus 50 Ubtf ENSMUSG00000020923 ENSMUST00000107121,ENSMUST00000107119,ENSMUST00000006754,ENSMUST00000107117,ENSMUST00000107115 3 5 7 122 11 102172783 102172801 GACCTTATCCAGAATGCCA 59 102171876 102172697 GTCCCGCATAATCTCATCC 59 NA Mus musculus 50 Map3k14 ENSMUSG00000020941 ENSMUST00000021324,ENSMUST00000100354 2 2 2 85 11 103102398 103102416 GAATAGCCAAGAGTTCAGC 58 103101137 103101155 GATCGAGACTCTCAGACTG 58 NA DesignNoJunction Mus musculus 50 Sgpp1 ENSMUSG00000021054 ENSMUST00000021450,ENSMUST00000110428 3 2 2 84 12 76817641 76823647 TCTATCCTGGATGTCATTGC 59 76817576 76817594 AGTTGTCAATCAGGTCCAC 59 NA Mus musculus 50 Wars ENSMUSG00000021266 ENSMUST00000109848,ENSMUST00000078788 3 2 2 84 12 110101069 110101088 CTGTGAAGTGGATGTATCCT 58 110099628 110101024 GGTGTAATCCTTTCTGATCTG 58 NA Mus musculus 50 Nsd1 ENSMUSG00000021488 ENSMUST00000099490 3 1 3 80 13 55340208 55346883 AGGATATAGGCATAAGGTTCC 58 55346925 55346943 GGAACATCATATTGCTCGG 58 NA Mus musculus 50 Slc34a1 ENSMUSG00000021490 ENSMUST00000057167 1 1 2 84 13 55510511 55513402 CATCAACACAGACTTTCCTG 58 55513449 55513467 GACAACAAAGGTCATGCTG 59 NA Mus musculus 50 Cast ENSMUSG00000021585 ENSMUST00000109613 2 1 5 81 13 74875677 74875699 GACTATTCCTCCAGAGTATAGGA 59 74874274 74875049 AGTAGACTTAGGAGAGTCTGG 59 NA Mus musculus 50 Prkcd ENSMUSG00000021948 ENSMUST00000022521,ENSMUST00000112211,ENSMUST00000112210,ENSMUST00000112208,ENSMUST00000112207,ENSMUST00000112206 1 6 9 93 14 31409206 31411917 TTAAGCCCAAAGTGAAATCC 58 31409132 31409150 AGGTTCTTGTCACTGAAGG 59 NA Mus musculus 50 Lcp1 ENSMUSG00000021998 ENSMUST00000110915,ENSMUST00000022575,ENSMUST00000110916,ENSMUST00000110913 2 4 4 95 14 75608362 75610256 ACATCAAGGACTCCAAAGC 59 75610314 75610333 CTGACATGTCAATCACAACC 59 NA Mus musculus 50 Rad1 ENSMUSG00000022248 ENSMUST00000100775 2 1 2 80 15 10422548 10422566 TCCCATCTTGACTATCCCA 59 10422609 10425670 ATCCGAAATTCTGTTGACCT 59 NA Mus musculus 50 Rabl2a ENSMUSG00000022621 ENSMUST00000094056 3 1 3 99 15 89414428 89414782 GGTACCTGCAGACATACAG 59 89414347 89414365 AACATTGGTACCATCAGCA 59 NA Mus musculus 50 Cblb ENSMUSG00000022637 ENSMUST00000114471 3 1 2 82 16 52186334 52189133 TCTATTTGAAGGGTGAGGAC 58 52189178 52189196 GATGAGACTGTGTCTTGCA 59 NA Mus musculus 50 Nat13 ENSMUSG00000022698 ENSMUST00000063520,ENSMUST00000063542,ENSMUST00000023382,ENSMUST00000114661 2 4 5 81 16 44158046 44159583 GACAATATCTATCTGCATGTCC 58 44159624 44159643 TCTCGATAATCTCAAAGCCA 58 NA Mus musculus 50 Cxadr ENSMUSG00000022865 ENSMUST00000114229 3 1 2 85 16 78336544 78336562 GACGCAGTATAACCAAGTC 57 78336611 78359468 AAGCGTACTTGAACTTAGC 57 NA Mus musculus 50 Rps6ka2 ENSMUSG00000023809 ENSMUST00000024575,ENSMUST00000024619,ENSMUST00000097427 1 3 3 80 17 7451061 7451081 GGTCAGATCTAAGATGGAGAG 58 7451123 7453650 GTCTGAAAGGCATAATGCA 58 NA Mus musculus 50 Myom1 ENSMUSG00000024049 ENSMUST00000073211,ENSMUST00000024847 3 2 2 80 17 71466726 71466745 AAGGGAAATACGTGATGGAG 59 71466787 71469994 CATCAAATGCTTGTCCAGAG 59 NA Mus musculus 50 Strn ENSMUSG00000024077 ENSMUST00000024881,ENSMUST00000112483 2 2 2 90 17 79055164 79056255 CAATACAGGCAAACTGATCC 58 79055093 79055111 AGACATCAAGTAGAGGCCA 59 NA Mus musculus 50 Sfrs7 ENSMUSG00000024097 ENSMUST00000063417,ENSMUST00000112421,ENSMUST00000063403 1 3 3 83 17 80603703 80603721 ATCTAGATCCCATTCCCGA 59 80603558 80603656 GATGCTGATCTTGACCTCC 59 NA Mus musculus 50 Zfp523 ENSMUSG00000024220 ENSMUST00000116628,ENSMUST00000073534,ENSMUST00000002318 2 3 3 85 17 28340126 28340145 TGAAGAACTAGCCACATCTG 59 28340193 28341415 AGGTAATGATTGTGACGGG 59 NA Mus musculus 50 Bin1 ENSMUSG00000024381 ENSMUST00000025239,ENSMUST00000091967,ENSMUST00000115796 1 3 3 80 18 32579727 32579747 GTAGGTTTCTATGTCAACACG 58 32579787 32581540 CTGATTGAGCTTACTCATCTC 57 NA Mus musculus 50 Tcerg1 ENSMUSG00000024498 ENSMUST00000025375 3 1 2 198 18 42690356 42690375 CAGTTAGTGTTTCAGCTCCT 59 42690536 42694748 ATTGCTACACCTGGAAGTG 59 NA Mus musculus 50 Sorbs1 ENSMUSG00000025006 ENSMUST00000025973 1 1 5 80 19 40414625 40418853 GGAGACCGACTAATCTAGAG 58 40414564 40414582 TAACGGTCTCCACTTTCTC 58 NA Mus musculus 50 Aasdhppt ENSMUSG00000025894 ENSMUST00000115732 1 1 2 91 9 4308793 4308811 TCGTTGAATCCATATCCCA 58 4302618 4308738 CTTTCTTTCAGTGCCTCAG 58 NA Mus musculus 50 Als2cr2 ENSMUSG00000026027 ENSMUST00000114296,ENSMUST00000027185 3 2 2 80 1 59042219 59045355 GCAAGTGGAGATAGGAAGAG 59 59045397 59045416 GTTACCAGTGTTCCTGTAGG 59 NA Mus musculus 50 Ccnt2 ENSMUSG00000026349 ENSMUST00000112570,ENSMUST00000027587 2 2 2 80 1 129696064 129696082 GTGTCAACAGATGGAAAGC 59 129696123 129698196 CTCATGTGTTAGTTCATCTAGC 58 NA Mus musculus 50 Srgap2 ENSMUSG00000026425 ENSMUST00000027683 3 1 3 80 1 133192108 133192906 ACATCAACAAAGGGATTCC 57 133192045 133192065 GATTAGTTCTCCAATAGCCTG 57 NA Mus musculus 50 Srgap2 ENSMUSG00000026425 ENSMUST00000097588 2 1 3 92 1 133189412 133192904 ATCAACAAGCAAAGGAAGC 58 133189338 133189356 GGAGTCAGTCAGAGAACTG 59 NA Mus musculus 50 Acvr1 ENSMUSG00000026836 ENSMUST00000112599,ENSMUST00000090935,ENSMUST00000112601,ENSMUST00000056376 1 4 5 80 2 58311344 58311365 TATAAGAGGGTCGATATTTGGG 58 58300845 58311305 TTCCACTATACCATTGCTCAC 59 NA Mus musculus 50 Abl1 ENSMUSG00000026842 ENSMUST00000075759,ENSMUST00000113455,ENSMUST00000028190,ENSMUST00000113454 1 4 4 81 2 31640287 31645796 GAAGACCTTGAAGGAGGAC 59 31645840 31645859 GTTAGGGTGTTTGATCTCCT 59 NA Mus musculus 50 Il1rn ENSMUSG00000026981 ENSMUST00000028358,ENSMUST00000114487,ENSMUST00000114486,ENSMUST00000114482,ENSMUST00000114485 1 5 5 106 2 24204053 24204073 CCTATTGACCTTCATAGTGTG 57 24204141 24204945 ATGTTAACTTCCTCCAGCT 58 NA Mus musculus 50 Dync1i2 ENSMUSG00000027012 ENSMUST00000112139,ENSMUST00000112138,ENSMUST00000081710 3 3 8 130 2 71057447 71057465 CATGGGACTAACTACGGAC 59 71066740 71073982 TAGGTCCTCGTCTAGATCC 58 NA Mus musculus 50 Itga6 ENSMUSG00000027111 ENSMUST00000112101,ENSMUST00000036783 2 2 3 95 2 71687478 71687496 ATTCAGGAGTAGCTTGGTG 58 71687555 71693920 AGAATCCACACTTCCACAG 59 NA Mus musculus 50 4933406J08Rik ENSMUSG00000027229 ENSMUST00000028661 1 1 1 60 2 122019002 122019021 TTAGACCAACACCAGAACAC 59 122024124 122024142 CTTGTGAGATGATGCTCTG 57 NA DesignNoJunction Mus musculus 50 Cdc25b ENSMUSG00000027330 ENSMUST00000079857 1 1 2 104 2 131017495 131018303 AGAGAAGGTGTCTTACCAC 58 131018371 131018389 CATCTTCTTCAGAAGCCCT 58 NA Mus musculus 50 Arfgap1 ENSMUSG00000027575 ENSMUST00000108862,ENSMUST00000108863,ENSMUST00000029092,ENSMUST00000098981,ENSMUST00000108861,ENSMUST00000108860,ENSMUST00000108859 1 7 7 88 2 180706782 180706800 GACACAGGACGACTATGAG 59 180706852 180707409 AAGTAGCCACCTTATCCCT 59 NA Mus musculus 50 Hps3 ENSMUSG00000027615 ENSMUST00000012580,ENSMUST00000108321 1 2 2 80 3 19908912 19910809 GGAGGATTTGATAAATGCCTG 59 19908852 19908871 GCTAAGGAATCAGATGTCGT 59 NA Mus musculus 50 Ttc14 ENSMUSG00000027677 ENSMUST00000108210,ENSMUST00000108208,ENSMUST00000099153,ENSMUST00000076916 3 4 5 91 3 33703380 33703398 CATGTGGATGCTATGAACG 58 33703452 33703570 GTTGCATATAATGCTCCTCG 58 NA Mus musculus 50 Spaca1 ENSMUSG00000028264 ENSMUST00000108148,ENSMUST00000084734 2 2 3 143 4 34116081 34116101 ACCATAGGAGTCATTATCTGC 59 34112112 34115466 TTGTTCGCACCTCATAGAG 59 NA Mus musculus 50 Slc44a1 ENSMUSG00000028412 ENSMUST00000102911,ENSMUST00000107651,ENSMUST00000107647,ENSMUST00000107645 2 4 5 65 4 53573971 53573989 AATACAATGATGGGAGCCC 59 53574018 53576025 TTTCCACAAACTCCATCAG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Tm2d1 ENSMUSG00000028563 ENSMUST00000030292,ENSMUST00000102793 3 2 3 81 4 98037237 98037255 GTGGCAGTTGCATTATCTC 58 98032319 98037192 TTAACAAGCCTAAGGCAGG 59 NA Nonspecific Mus musculus 50 Hspg2 ENSMUSG00000028763 ENSMUST00000030547 1 1 2 80 4 137063976 137064230 TTCATCAAGGAACTGGATGG 59 137064273 137064291 TTGAATCTGAGATCCGTCC 58 NA Mus musculus 50 Abcb8 ENSMUSG00000028973 ENSMUST00000115077,ENSMUST00000073076 1 2 3 87 5 23908987 23911641 CAGTACAGAGGTCTATGGC 58 23911961 23911979 ATGTATTCGAAGACTCGGG 58 NA Mus musculus 50 Ablim2 ENSMUSG00000029095 ENSMUST00000114205,ENSMUST00000114206,ENSMUST00000101280,ENSMUST00000114204 1 4 7 103 5 36200519 36200537 TAACTCTCCAGACCTGGAC 59 36200601 36217482 TCTTATACTGTGAGTAGAGGCT 59 NA Mus musculus 50 Brdt ENSMUSG00000029279 ENSMUST00000112677,ENSMUST00000031215 3 2 2 80 5 107777650 107779105 TGGTCCAAATTACAAAGGG 57 107779149 107779167 ATTCGCTACTTGCTTTAGC 58 NA Mus musculus 50 Cdk8 ENSMUSG00000029635 ENSMUST00000031640 1 1 3 155 5 147097815 147104218 GATATTTGGGCTATAGGGTG 57 147104336 147106749 CCAATCTTTATCTGCAGGG 57 NA Mus musculus 50 Cdk8 ENSMUSG00000029635 ENSMUST00000110605 1 1 3 80 5 147097748 147097767 GGTTGTAACATTCTGGTACC 58 147097809 147104227 GCAAATATACACCCAATTGC 57 NA Mus musculus 50 Zc3hav1 ENSMUSG00000029826 ENSMUST00000114900,ENSMUST00000039710,ENSMUST00000031850 2 3 4 92 6 38281851 38282149 TGCTGAGTATTCCCTATGC 58 38281777 38281797 CTGTACAGATGATCCAGACAG 59 NA Mus musculus 50 Trpv6 ENSMUSG00000029868 ENSMUST00000101476 3 1 2 88 6 41576524 41576544 GTAGTGAGGAGATTGTTAGAC 57 41576210 41576474 TATGTGTAGTACCCAGCTC 57 NA Mus musculus 50 Klrk1 ENSMUSG00000030149 ENSMUST00000095412,ENSMUST00000032252 1 2 2 80 6 129566728 129566749 CAATTCGATTCACCCTTAACAC 59 129566333 129566689 CTTCCTTGTTGCACAATACTG 59 NA Mus musculus 50 Rab38 ENSMUSG00000030559 ENSMUST00000032778,ENSMUST00000107256 2 2 2 73 7 95599249 95599268 GATGGTTTGAAACATCAGCC 59 95639150 95639168 AAGTATGTGCTTGACCAGG 59 NA DesignNoJunction Mus musculus 50 Coq7 ENSMUSG00000030652 ENSMUST00000098090 2 1 2 169 7 125670857 125670875 TGAGAAGTATGAGGAGCTG 58 125653686 125660858 TTTCATGATCATTGTCCCTG 57 NA Mus musculus 50 Cttn ENSMUSG00000031078 ENSMUST00000103079 3 1 2 99 7 151636952 151636970 AAATTTGGTGTTCAGTCCG 58 151635509 151636889 CTTTGGCATAGTCTTGCTG 58 NA Mus musculus 50 Enox2 ENSMUSG00000031109 ENSMUST00000114912,ENSMUST00000114916 2 2 6 90 X 46366737 46366755 CATCTCCACATTCCTTCAC 57 46364803 46366685 GGTGCTGATCTTATTATCGAG 58 NA Mus musculus 50 Chrdl1 ENSMUSG00000031283 ENSMUST00000063029,ENSMUST00000112878,ENSMUST00000074660 2 3 3 80 X 139745671 139745689 ATGCAGAATTATCGTGGGA 58 139738045 139745628 GGAGGTAAGAATGTCTTGCT 59 NA Mus musculus 50 Renbp ENSMUSG00000031387 ENSMUST00000114379 2 1 4 84 X 71175764 71175782 TTTCTGGATGGAGCATTCC 59 71175405 71175573 ACAATACATCCATACCTTCCC 59 NA Mus musculus 50 Nr3c2 ENSMUSG00000031618 ENSMUST00000109915 2 1 4 108 8 79609464 79609482 CTTCCAAGATCTGCTTGGT 59 79609554 79679113 TAGTTGTGTTGTACGGCTC 59 NA Mus musculus 50 6430548M08Rik ENSMUSG00000031824 ENSMUST00000034281,ENSMUST00000108948,ENSMUST00000108951,ENSMUST00000108950 3 4 4 82 8 122674044 122675215 GTAGTGCTGTTTGAATGCC 59 122675259 122675279 AGATGGTAGTAAGTGAAGCAC 59 NA Mus musculus 50 Slc37a2 ENSMUSG00000032122 ENSMUST00000115068 3 1 2 114 9 37041223 37041241 CTACATGCTCATCTCTGCC 59 37039229 37040901 AATTTGTTTGTACCCACTGC 59 NA Mus musculus 50 Abcg4 ENSMUSG00000032131 ENSMUST00000034648 3 1 2 81 9 44082934 44083112 CTCTCCTATGTTAGGTATGGC 59 44082873 44082891 CATCTAAGCAGGTCAGGTG 59 NA Mus musculus 50 Nphp3 ENSMUSG00000032558 ENSMUST00000116516,ENSMUST00000035167 1 2 4 80 9 103925124 103925756 GATCAAGTTCAGCAAGTGG 58 103925798 103925818 CACAGAAACAATGACTCTGAC 59 NA Mus musculus 50 Ccdc88a ENSMUSG00000032740 ENSMUST00000040182,ENSMUST00000101427 1 2 2 149 11 29377451 29380501 AAAGAAACAATGCTACGCTG 59 29380613 29380631 TCTGAAGCGTGGTATTCTG 59 NA Mus musculus 50 Nlrp4f ENSMUSG00000032999 ENSMUST00000081507 3 1 2 80 13 65284374 65284393 TGTCTCTTGAAGTTGAGCT 58 65284312 65284330 GTTCTGGTTGTTCTTCAGG 58 NA Mus musculus 50 Lpp ENSMUSG00000033306 ENSMUST00000038053,ENSMUST00000115314 1 2 2 84 16 24889970 24889988 TGTCTGTGATGTCAAGCTC 59 24890034 24971925 CAGGGTATTAATGTAGCAGGG 59 NA Mus musculus 50 Map2k4 ENSMUSG00000033352 ENSMUST00000046963,ENSMUST00000108694 3 2 2 81 11 65509844 65509862 AAGAATAGACCCAAGTGCA 58 65507064 65509800 CAACTCGTACAATGTGATCC 58 NA Nonspecific Mus musculus 50 Stard9 ENSMUSG00000033705 ENSMUST00000094652,ENSMUST00000099504,ENSMUST00000070420 1 3 3 80 2 120531589 120532005 GTGGACACCACTAGAATCC 59 120532048 120532067 ATACTCTTGAAGCATGAGCT 58 NA Mus musculus 50 Gria2 ENSMUSG00000033981 ENSMUST00000107745 2 1 3 177 3 80494436 80496221 AGGATCCTCATTAAGAACCC 58 80493226 80493244 GTAGAATACTCCAGCAACG 57 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111696,ENSMUST00000111695,ENSMUST00000111694,ENSMUST00000111678,ENSMUST00000111677,ENSMUST00000111676,ENSMUST00000111687,ENSMUST00000111685,ENSMUST00000111684,ENSMUST00000111672 2 10 23 71 2 84443385 84443403 AAGAGTTGGATGTGTTGGT 59 84443048 84443350 GCTAAATCTTCTGCATGGG 58 NA DesignRelaxed Mus musculus 50 Ccdc128 ENSMUSG00000034709 ENSMUST00000038551,ENSMUST00000112218 3 2 2 120 17 88942244 88944669 TGCTCTGAAGGAACAACTG 59 88944752 88944771 CTCATCTTGAAGGAGTTCCA 59 NA Mus musculus 50 Gng12 ENSMUSG00000036402 ENSMUST00000043148,ENSMUST00000114228,ENSMUST00000114227,ENSMUST00000114226,ENSMUST00000114225,ENSMUST00000114224,ENSMUST00000114222 1 7 7 123 6 66965821 66967462 CCATCGAAAGAATAAAGGTCTC 58 66967546 66967564 TTCTTATCCTTGAACGGGT 58 NA Mus musculus 50 Cdh8 ENSMUSG00000036510 ENSMUST00000109461 3 1 5 81 8 101554787 101554806 AACCCAGATGGAATTAATGG 57 101548844 101554743 GCCTCTTTGGTAATCTTGG 58 NA Mus musculus 50 Zcchc12 ENSMUSG00000036699 ENSMUST00000048067,ENSMUST00000115256,ENSMUST00000115258 3 3 4 160 X 33736551 33736780 TTGTAGAGCTGGTCTTGAG 58 33737318 33737336 GTCTCCAATCTCAGTAGGG 58 NA InUTR Mus musculus 50 2310002J15Rik ENSMUSG00000036731 ENSMUST00000043379,ENSMUST00000114356 1 2 2 60 2 25094902 25094920 TCCTTCTTCATCTTCCTCC 57 25094860 25094878 CTCTGGGATACATGTTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Plch1 ENSMUSG00000036834 ENSMUST00000048134 1 1 3 94 3 63506050 63508063 TTGGAAAGAACAGACAGCT 59 63505974 63505992 CTTCCGAACATAATGCGAG 58 NA Mus musculus 50 Zdhhc9 ENSMUSG00000036985 ENSMUST00000088935,ENSMUST00000037960 1 2 2 82 X 45547791 45547809 ACAAGTTTCAGTGACCCTG 59 45544547 45547745 TTGGTGGCTTCTATTTCCA 58 NA Mus musculus 50 D4Wsu53e ENSMUSG00000037266 ENSMUST00000078084,ENSMUST00000037403 3 2 2 149 4 134480258 134480277 GTACTACGCGATCACTAGAG 59 134480387 134481217 TCCATTCGATCTTTCTCACTC 59 NA Mus musculus 50 Wdhd1 ENSMUSG00000037572 ENSMUST00000111791,ENSMUST00000111792,ENSMUST00000095945 3 3 4 80 14 47875930 47878209 CTTCTCTGCTGAAGGTACTC 59 47875869 47875887 CATGTATTCCCGAGTCCTC 59 NA Mus musculus 50 Fbxo8 ENSMUSG00000038206 ENSMUST00000110322 2 1 2 159 8 59043670 59043688 ATGATGAACTTCTCTGGCA 58 59048200 59070243 ATAGACAGCATCTCCTCTG 57 NA Mus musculus 50 Arl5c ENSMUSG00000038352 ENSMUST00000042971 2 1 2 80 11 97854812 97855659 ATGCTGAGTTTGTCATCCT 58 97854750 97854769 GCATCTTATACAGCTCCTCC 59 NA Mus musculus 50 Nepn ENSMUSG00000038624 ENSMUST00000067085 3 1 1 152 10 52121046 52121064 GCTGTTGTCTATCCCTCTG 59 52123824 52123842 AAATCTAAGGCCGAGATCC 58 NA DesignNoJunction Mus musculus 50 Myst2 ENSMUSG00000038909 ENSMUST00000072621,ENSMUST00000107734,ENSMUST00000107733,ENSMUST00000103159,ENSMUST00000092766 3 5 5 81 11 95142945 95143160 AGAACAAGATCTACTGCCA 57 95142882 95142903 GGTTCTACATCATAGTATAGCG 57 NA Mus musculus 50 Prc1 ENSMUSG00000038943 ENSMUST00000047549 2 1 2 82 7 87456055 87457110 AAAGTACGCAAGATGAACAC 58 87457154 87457173 TACACTGATCCACCAAAGAC 59 NA Mus musculus 50 Mycbpap ENSMUSG00000039110 ENSMUST00000093945 3 1 2 80 11 94371319 94371337 TGTTTCTGATCTACCGACG 59 94371171 94371275 CCAGGCCATCAATATCCTG 59 NA Mus musculus 50 Stim2 ENSMUSG00000039156 ENSMUST00000071083,ENSMUST00000087347 3 2 3 81 5 54493862 54493881 TTGAACTGCCACAATATGAG 58 54493923 54494829 GTTTCATGAACTGCTATCCTG 59 NA Mus musculus 50 Nt5dc1 ENSMUSG00000039480 ENSMUST00000099973 3 1 3 158 10 34119587 34119607 TGATAACTACTTTGACCTGCC 59 34117038 34117928 ATGCCAGGTTCCTTAAAGG 59 NA Mus musculus 50 Kmo ENSMUSG00000039783 ENSMUST00000111170 2 1 3 88 1 177579376 177579394 CCGCTTTGATTACACTCAG 58 177579444 177580749 CATCATATAGGCATTTCTCCC 58 NA Mus musculus 50 Zmym5 ENSMUSG00000040123 ENSMUST00000111285 2 1 2 124 14 57423689 57429584 TGGAGAAGATTCATCAGTGG 59 57423584 57423602 TGTTTCTAGATGTACCGGC 59 NA InUTR Mus musculus 50 Limd2 ENSMUSG00000040699 ENSMUST00000045923,ENSMUST00000064545,ENSMUST00000106875 1 3 3 121 11 106020379 106020484 CGGTCTAAGTCCTTTAGCT 58 106020276 106020294 CAGAAACAAGAGTTGTGGA 57 NA Mus musculus 50 Camta2 ENSMUSG00000040712 ENSMUST00000108544,ENSMUST00000036299 2 2 5 80 11 70484234 70484407 TGGATTGCACTTAAGTTTGC 59 70484173 70484192 ATAGTAGCTTCGGAACTTGC 59 NA Mus musculus 50 Slc25a34 ENSMUSG00000040740 ENSMUST00000038661 2 1 1 125 4 141178169 141178187 GTCACAGTAGGTTCAGCTG 59 141177371 141177389 TATACTGCTGATCATGCCA 58 NA DesignNoJunction Mus musculus 50 Reps2 ENSMUSG00000040855 ENSMUST00000112334,ENSMUST00000101102 2 2 3 80 X 158952279 158956274 TGAATCGGATGGAGAAGAC 58 158952217 158952235 TGTCATCAGCAGTAGTCAC 59 NA Mus musculus 50 Tmco4 ENSMUSG00000041143 ENSMUST00000084208 3 1 3 148 4 138566457 138566475 TGACATTCTGGAAGAGGTG 58 138575558 138576788 TCTTCATCTTGTATCCGGC 59 NA Mus musculus 50 0610009K11Rik ENSMUSG00000041241 ENSMUST00000105813,ENSMUST00000044058,ENSMUST00000105814 1 3 4 111 4 137994175 137994193 AAGAAACACTCAACAGCCA 59 137994268 137994874 TAGTCATTCCAAAGGTGGG 58 NA Mus musculus 50 4833418A01Rik ENSMUSG00000041966 ENSMUST00000038143,ENSMUST00000112159 1 2 6 91 2 70916210 70919974 ATCATCGAACAGACTCACC 59 70920029 70920047 GATGATGTAGTGCCAAGGA 59 NA Mus musculus 50 Tmcc2 ENSMUSG00000042066 ENSMUST00000045473 2 1 1 94 1 134256876 134256894 ACTACACCTACATGACCCA 59 134255564 134255582 ATTCTGGTGAAGCTCAGTC 59 NA DesignNoJunction Mus musculus 50 2010015L04Rik ENSMUSG00000042233 ENSMUST00000105622,ENSMUST00000050128 1 2 4 80 4 154816185 154816203 AGTTATCCCAGGAGAAGTC 57 154816246 154820763 GTGGCTCTGAAATATAACGG 58 NA Mus musculus 50 Gjb3 ENSMUSG00000042367 ENSMUST00000046532,ENSMUST00000106091 1 2 2 60 4 127003817 127003836 AAGACTTTGACTGTAACACC 57 127003776 127003795 AAGAAGTTGTCATAGCACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ubap2l ENSMUSG00000042520 ENSMUST00000029553 1 1 5 91 3 89806257 89806277 CCTTTATGCATATTCTGACCC 58 89805776 89806204 CTGCAAATATGGTAGCTGG 58 NA Mus musculus 50 Myo15 ENSMUSG00000042678 ENSMUST00000071880,ENSMUST00000094135,ENSMUST00000094136,ENSMUST00000108720 1 4 5 110 11 60293378 60293396 GAATTCGCACCTACTCCTC 59 60293470 60295167 TGGAGTGCATCTTGTTCTG 59 NA Mus musculus 50 4833436C18Rik ENSMUSG00000042788 ENSMUST00000052829,ENSMUST00000107931,ENSMUST00000107928,ENSMUST00000107929 3 4 4 93 4 43441115 43441135 GCATAATCCCTGGGTATACAG 59 43440969 43440988 AATTCACTCATAGCTTCAGC 57 NA DesignNoJunction Mus musculus 50 Il17re ENSMUSG00000043088 ENSMUST00000058548,ENSMUST00000062146,ENSMUST00000101065,ENSMUST00000053569 2 4 5 83 6 113418937 113419027 TCTTGTGTCCTGATGTCTC 58 113419074 113419092 GAACTACACCCACTAGAGC 59 NA Mus musculus 50 Clrn1 ENSMUSG00000043850 ENSMUST00000055636 3 1 3 111 3 58688733 58688751 TAAGGCAATGTGGGTTAGG 59 58669058 58676625 ACCAAATCTGGGAAGACTG 59 NA Mus musculus 50 9930022D16Rik ENSMUSG00000045065 ENSMUST00000055404 2 1 1 66 11 109279238 109279256 TTAATGTCCTCGTTTGGGA 58 109279286 109279304 GGCTCATCTCAAATGAGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mtus1 ENSMUSG00000045636 ENSMUST00000059115,ENSMUST00000093534,ENSMUST00000051379 2 3 5 91 8 42087723 42087741 ACTTATACACCGCAGAGTG 59 42086212 42087668 GTTGTCAAACTGCTCTTGC 59 NA Mus musculus 50 Mbtps2 ENSMUSG00000046873 ENSMUST00000065806,ENSMUST00000112522 1 2 4 81 X 154010841 154010859 TTGTTGATCTGTTCACCAC 57 154007018 154010796 AAACGTCACTAAACTGCAC 58 NA InUTR Mus musculus 50 Zfp295 ENSMUSG00000046962 ENSMUST00000113734,ENSMUST00000052089 1 2 3 151 16 98174248 98177930 CTTGCCAGATAAAGTGCAG 58 98174115 98174133 ATGAGCTCGGAATTTCTGG 59 NA Mus musculus 50 Tmem93 ENSMUSG00000047260 ENSMUST00000054952,ENSMUST00000108480 3 2 2 61 11 72990040 72990059 CTACGGCTTCATCTTCTACC 59 72989998 72990016 CTTTGAGAATGAGGAGCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr82 ENSMUSG00000047678 ENSMUST00000053659 2 1 1 148 X 13239534 13242150 TACTCAGACAGACGAAGGA 59 13242354 13242372 GATGGTTGAATGCATGTCG 59 NA InUTR Mus musculus 50 Cd300lf ENSMUSG00000047798 ENSMUST00000106561,ENSMUST00000092455 3 2 4 128 11 114987519 114987537 CTTCACAGTGACCATGGAG 59 114985676 114987427 ATGGGTACTTGGATTGCTG 59 NA Mus musculus 50 Zbtb8 ENSMUSG00000048485 ENSMUST00000106046,ENSMUST00000053042 3 2 2 111 4 129109564 129109585 GTTCAGAACGACTGGTATAGAG 59 129105770 129105788 GTTTGAGGATGCCTTTCTG 58 NA DesignNoJunction Mus musculus 50 4930542C16Rik ENSMUSG00000048628 ENSMUST00000062438 2 1 1 60 14 25434587 25434608 CCAGAGTCATTTAGAGTCAGAC 59 25434548 25434566 CCTATTGCCCAACCTTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Atp13a5 ENSMUSG00000048939 ENSMUST00000075806 3 1 2 82 16 29328819 29334046 TGATTTGAGACAGCAATCAG 58 29328756 29328774 TGTCTCTTACTGTGATCGT 57 NA Mus musculus 50 Zadh2 ENSMUSG00000049090 ENSMUST00000060223 2 1 1 60 18 84263825 84263843 ACATCAACTATTCGGCTGG 59 84263866 84263885 AAACCTATGTCAAAGGGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr630 ENSMUSG00000050281 ENSMUST00000052826,ENSMUST00000106880 2 2 2 60 7 110903606 110903627 GATAATTCCACTTATAGCCCGT 59 110903567 110903586 AGAAAGAACATGAGAGCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lgals3 ENSMUSG00000050335 ENSMUST00000022388 3 1 1 77 14 48001316 48001334 ATGCTGATCACAATCATGG 57 48004292 48004310 AACATCATTCCCTCTCCTG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Cited1 ENSMUSG00000051159 ENSMUST00000050551,ENSMUST00000113622,ENSMUST00000101336 1 3 3 83 X 99443944 99443962 AATGCCAACTATGTCGAGG 59 99443325 99443343 GAGTTCATCTCCTGGTTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Il1rapl1 ENSMUSG00000052372 ENSMUST00000113966,ENSMUST00000078875 3 2 4 88 X 83993740 83993759 TGAAATCCTCCCTGATATGC 59 83993291 83993690 CAATGTATGTTCCAGTTGGG 58 NA Mus musculus 50 C730048C13Rik ENSMUSG00000052562 ENSMUST00000078808 3 1 3 99 19 8419068 8419086 TCTTAATCACATGGGACGT 58 8411332 8419005 AGAGTATGTTGCTTGAGGT 58 NA Mus musculus 50 Senp7 ENSMUSG00000052917 ENSMUST00000089360 3 1 4 96 16 56082514 56097464 TACAGAAGTGGACAAGAAGC 59 56097521 56097541 TTTGGTAATCCCTTAGGAGGA 59 NA Mus musculus 50 Mapk14 ENSMUSG00000053436 ENSMUST00000004990 3 1 6 80 17 28865909 28877634 CTGGTACAGACCATATTAACCA 59 28877672 28877693 GCATCCTGTTAATGAGATAAGC 59 NA Mus musculus 50 Camk2d ENSMUSG00000053819 ENSMUST00000106402,ENSMUST00000106404,ENSMUST00000106397,ENSMUST00000106396,ENSMUST00000106401 3 5 9 99 3 126511159 126513566 GGAAACAAGGAGTCAACTG 58 126537515 126537533 CAATCAGTTGCTCAGTGAC 58 NA Mus musculus 50 Lgals4 ENSMUSG00000053964 ENSMUST00000015291 3 1 2 93 7 29622768 29625610 CATATCCGGTCATGACAGG 59 29625920 29625938 ATGATGGTTCTTCGGACTG 59 NA Mus musculus 50 Ugt1a1 ENSMUSG00000054545 ENSMUST00000097659,ENSMUST00000049289 2 2 11 262 1 90098045 90098064 AAACTGTGTTACCAAGAAGC 58 90112451 90112724 TCTTTGGATGACCAAGCAG 59 NA DesignRelaxed Mus musculus 50 Fut9 ENSMUSG00000055373 ENSMUST00000084770 1 1 2 65 4 25636193 25636211 CACTCATCTCTGCTTTCCA 59 25547939 25547957 GCCTTTGGATGTTGATGTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Fbxo6 ENSMUSG00000055401 ENSMUST00000105706,ENSMUST00000056965,ENSMUST00000030858 1 3 3 93 4 147520286 147520439 ATGGCAAGAGATTTCCCAC 59 147520211 147520229 TTTCCAGAACTGAGTGTCC 59 NA Mus musculus 50 Pgm3 ENSMUSG00000056131 ENSMUST00000070064 2 1 2 95 9 86449968 86451123 AACTCAAAGTTAAGGTCGC 57 86449891 86449909 CATTGATTGCCTCTTGGAG 58 NA Mus musculus 50 Lrrc48 ENSMUSG00000056598 ENSMUST00000108723 1 1 4 81 11 60189343 60189361 GTATTCCGAGGATGTGGAG 59 60189406 60191327 AAACTTGTCCTTGTAGGCT 58 NA Mus musculus 50 Skap1 ENSMUSG00000057058 ENSMUST00000049000 2 1 7 156 11 96402783 96569880 CAGATTATCAGGACGAGGG 58 96569997 96572187 CTAGAAGCTGTAAACTCATAGC 58 NA Mus musculus 50 Slc44a2 ENSMUSG00000057193 ENSMUST00000030045,ENSMUST00000034697 2 2 2 81 9 21156988 21158136 CTGTTTCTTGGAGGATCTG 57 21158180 21158199 CAAGAGTTTCTTGAGAGTGG 58 NA Mus musculus 50 Arhgap24 ENSMUSG00000057315 ENSMUST00000094559,ENSMUST00000112855,ENSMUST00000112854,ENSMUST00000073302,ENSMUST00000112853,ENSMUST00000112852,ENSMUST00000070000,ENSMUST00000112849 2 8 8 80 5 103304838 103307469 GAAGAAGCAGGTGTTAAGG 58 103307512 103307531 GCAAATGTACTTCAGAAGGT 58 NA Mus musculus 50 Saa2 ENSMUSG00000057465 ENSMUST00000075982,ENSMUST00000094404 2 2 2 219 7 54008850 54008868 AAATACTTCCATGCTCGGG 59 54009465 54009483 ACTCTCAGTATTTGGCAGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Mmel1 ENSMUSG00000058183 ENSMUST00000080559,ENSMUST00000105634 1 2 4 185 4 154261786 154261804 GAAAGACCAGAACCTGTCC 59 154262028 154263314 GAAACCCTGTCCTTCAGAC 59 NA Mus musculus 50 Zfp82 ENSMUSG00000058447 ENSMUST00000080834,ENSMUST00000072617 3 2 3 80 7 30847295 30847313 TGATTTCCTTACTGGAGCA 58 30842524 30847252 CCTTAGTTTCCGAATCTGGA 59 NA Mus musculus 50 Kcnt1 ENSMUSG00000058740 ENSMUST00000037580,ENSMUST00000038506,ENSMUST00000114172 1 3 5 119 2 25766833 25766851 CAAGAACCGAATGAAGCAC 59 25768232 25771311 TCGTTCATCTCATCTTGCA 58 NA Mus musculus 50 Rgs3 ENSMUSG00000059810 ENSMUST00000107418 2 1 10 177 4 62361755 62362086 AATGGCTTAGAAGTGTTCCA 59 62362226 62363103 CCAGGTTTACCTCTTTGCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Rnf14 ENSMUSG00000060450 ENSMUST00000115589 3 1 2 82 18 38457164 38457182 TGACGAAGTGGTTACTGAC 59 38457227 38459424 TACAGAAAGTCTGCCATCTG 59 NA InUTR Mus musculus 50 Slc9a6 ENSMUSG00000060681 ENSMUST00000114784 2 1 3 181 X 53873589 53875788 AGTCCAACTACCTTGTTGG 59 53876232 53876545 ATGATGGACCCAATAACGA 58 NA Mus musculus 50 Ppm1b ENSMUSG00000061130 ENSMUST00000080217 2 1 5 231 17 85402715 85404261 GGGTTGAAGAAATCATGCA 58 85412940 85412958 AGAGCTTCCACCAATTTCC 59 NA DesignRelaxed Mus musculus 50 Olfr1289 ENSMUSG00000061195 ENSMUST00000078041,ENSMUST00000102551 3 2 2 60 2 111323738 111323759 CAACCTCTCATTCATAGATCTG 58 111323779 111323798 ATCAGCAATAGTCTTTGGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tnnt3 ENSMUSG00000061723 ENSMUST00000105955,ENSMUST00000105952,ENSMUST00000105949,ENSMUST00000105948,ENSMUST00000105947,ENSMUST00000105944 1 6 20 148 7 149691428 149694250 CCAAGAAGAGGAGAAACCA 58 149697219 149697237 TTCTAGCTTCAAAGTGGCT 58 NA Mus musculus 50 Zscan20 ENSMUSG00000061894 ENSMUST00000084276,ENSMUST00000097877,ENSMUST00000106082 2 3 3 192 4 128265423 128265441 GATGGACTCACTGATGAGG 59 128264078 128265268 CAACTCAAATCCTGCATCTG 59 NA Mus musculus 50 Zfp27 ENSMUSG00000062040 ENSMUST00000085788 2 1 2 185 7 30680700 30680720 CAGAAGATCCATACAGGAGAG 59 30680451 30680553 TCTTGAGTGAATTCGTCGG 59 NA Mus musculus 50 Actg1 ENSMUSG00000062825 ENSMUST00000106216 2 1 5 60 11 120207735 120207754 CAGGAGTATGATGAGCAGG 59 120207693 120207711 GCTCAGTCCATCTAGAAGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Olfr800 ENSMUSG00000063452 ENSMUST00000104903,ENSMUST00000076631 2 2 2 61 10 129097266 129097284 AGCAGGATCTGTACAAGAC 58 129097309 129097327 GGCAGGATTACAAACAAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nup98 ENSMUSG00000063550 ENSMUST00000096648 2 1 2 80 7 109276328 109276346 CTTTGGTATTTGCTTCCGC 59 109275095 109276287 CTCAGGAGTATTCTGAAATGCT 59 NA Mus musculus 50 2410003J06Rik ENSMUSG00000064018 ENSMUST00000071597 1 1 1 60 6 60720703 60720721 AGTCATTCCACCAGATCAG 58 60720661 60720681 TTTCCCATCTACAGTCATCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Krt2 ENSMUSG00000064201 ENSMUST00000023712,ENSMUST00000052664 1 2 2 80 15 101644416 101644434 GAAATCAGCGAGTTGAACC 59 101643710 101644372 TTGTACACCCTTACACTGC 59 NA Mus musculus 50 Cntn4 ENSMUSG00000064293 ENSMUST00000089208,ENSMUST00000113264,ENSMUST00000113261,ENSMUST00000113260,ENSMUST00000079416 1 5 6 80 6 106568389 106605500 ATGTGATTGTGAAAGACCC 57 106605543 106605562 GAAGAACAATGCTTTCTCCT 58 NA Mus musculus 50 Mup3 ENSMUSG00000066154 ENSMUST00000107472,ENSMUST00000084531 3 2 2 136 4 61745621 61745804 TAACCAATGTCAATCGCTG 58 61744714 61744732 ATAGGAAGGGATGATGCTG 58 NA InUTR Mus musculus 50 Epc2 ENSMUSG00000069495 ENSMUST00000102770 1 1 2 121 2 49385656 49390785 AAACTAAGGTGCTGTCTCC 59 49392099 49392119 GTTATTAGCTTGGTCCAAACG 59 NA Mus musculus 50 Sat2 ENSMUSG00000069835 ENSMUST00000092969,ENSMUST00000108656 3 2 2 82 11 69436034 69436214 ATCAGTGAAGAAGCTCTGC 59 69436260 69436278 GGTGCTGGGATAATCTCTG 59 NA Mus musculus 50 Rnf121 ENSMUSG00000070426 ENSMUST00000106954,ENSMUST00000096639,ENSMUST00000106953 3 3 3 189 7 109191159 109207607 GGTTGATATGTCAGACCTCTC 59 109183967 109188075 GGTCACCATATTGTAAGAACG 58 NA Nonspecific Mus musculus 50 Wfdc8 ENSMUSG00000070533 ENSMUST00000109339,ENSMUST00000094351,ENSMUST00000094350 1 3 4 91 2 164425510 164425529 GTAAGAACGACATGGATTGC 59 164423268 164425456 AAAGCAGGAAACTAGCCAG 59 NA Mus musculus 50 6330545A04Rik ENSMUSG00000073733 ENSMUST00000105793,ENSMUST00000097813 3 2 2 84 4 140774522 140774540 CTTCCTGGACAGTTGACTC 59 140774586 140775768 GCATGTACTGATCAAACTTGG 59 NA Mus musculus 50 Gm826 ENSMUSG00000074623 ENSMUST00000109474,ENSMUST00000099127 1 2 3 90 2 160152854 160152872 TGGTCAAGAAACGACAGAG 59 160137785 160137803 TCCAGAAATTCCTCAGGAC 58 NA DesignNoJunction, InUTR Mus musculus 50 IGKV4-90 ENSMUSG00000076533 ENSMUST00000103334 1 1 1 63 6 68757225 68757243 CACAATCAACAGCATGGAG 59 68757180 68757199 GTAACTACTCCTTTGCTGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV7D-3 ENSMUSG00000076767 ENSMUST00000103576 1 1 1 60 14 53364413 53364431 GGCAGATTCACAATTCACC 59 53364455 53364473 AGTCTCTGATGTGTAGCGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV7D-3 ENSMUSG00000076767 ENSMUST00000103576 3 1 1 90 14 53364383 53364401 TCCATCTTCTCCAATGGTG 58 53364455 53364473 AGTCTCTGATGTGTAGCGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 0610010B08Rik ENSMUSG00000078899 ENSMUST00000109050 3 1 3 131 2 175149713 175151409 ACTTTAGAACATGCAGTGG 57 175149600 175149619 AAACCTCATGTTCCTTACAG 57 NA Nonspecific Mus musculus 50 Ifi27 ENSMUSG00000079017 ENSMUST00000055071 1 1 1 171 12 104681110 104681128 TAGCAGCCAAGATGATGTC 59 104680509 104680527 ATCTCCTAAGCTCAGAGCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Ccdc13 ENSMUSG00000079235 ENSMUST00000070702,ENSMUST00000035109 3 2 2 115 9 121718242 121718260 ACACTTGTGGAATCTGCTC 59 121717339 121717357 TTCATTTCTGCAGCTTGTG 58 NA DesignNoJunction Mus musculus 50 ENSMUSG00000072493 ENSMUSG00000072493 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 ENSMUSG00000074668 ENSMUSG00000074668 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 1500005I02Rik ENSMUSG00000000202 ENSMUST00000000206 3 1 1 79 11 114655208 114655226 CCAGAGTGAGGTTATGCTG 59 114653820 114655166 CACCACAGTACAAATACCTG 58 NA DesignRelaxed Mus musculus 50 Rem1 ENSMUSG00000000359 ENSMUST00000000369 2 1 1 82 2 152454983 152459201 TGAGAAACTGGATGAAAGCT 59 152459246 152459264 GATCCGCTATGGAGTACAC 59 NA Mus musculus 50 Itga5 ENSMUSG00000000555 ENSMUST00000023128 1 1 1 80 15 103186754 103186772 CTCCGTCTATGATGACAGC 59 103186391 103186517 GCAACAAAGTCTTCTGTGTC 59 NA Mus musculus 50 Dbh ENSMUSG00000000889 ENSMUST00000000910 2 1 1 91 2 27036615 27036999 TGGTAAACAGGTTCAGCAG 59 27037054 27037072 ATTGAAAGAGTTCCAGGGC 59 NA Mus musculus 50 Ltbp1 ENSMUSG00000001870 ENSMUST00000112518,ENSMUST00000001927 3 2 5 80 17 75578478 75578496 ACCACCACTCTCATTAGTG 58 75578539 75624509 AAGATGGCAAATAACCACTC 58 NA Mus musculus 50 Ncan ENSMUSG00000002341 ENSMUST00000002412 1 1 1 83 8 72624187 72624205 ATGAGAATTCGTGGATCGG 59 72622084 72624141 TCTCATATTGCAGTCCTGTG 59 NA Mus musculus 50 Akap8l ENSMUSG00000002625 ENSMUST00000050214 1 1 1 80 17 32469851 32469956 TTCCTGCAGGAATATGTCAC 59 32469790 32469808 GATCAGACCATCAAGGTCC 59 NA Mus musculus 50 Gnmt ENSMUSG00000002769 ENSMUST00000002846 2 1 1 160 17 46863120 46863225 ACTATAAGAGTGACCTGACC 57 46862890 46862908 ACAGTGTGGGTAGTAAGAG 57 NA Mus musculus 50 Ap1m2 ENSMUSG00000003309 ENSMUST00000115433,ENSMUST00000003397 2 2 2 82 9 21100931 21100950 CCGTTACATGAAGATCATCG 58 21100290 21100887 GTTGATAATCACCACTCTGC 58 NA Mus musculus 50 Taf6l ENSMUSG00000003680 ENSMUST00000003777,ENSMUST00000113244 2 2 2 102 19 8856889 8857044 AGCTGTCAGAGTTCATGTC 59 8856545 8856563 TTTGAGCAGGTCATCTGTC 59 NA Mus musculus 50 Ly9 ENSMUSG00000004707 ENSMUST00000068878,ENSMUST00000004827,ENSMUST00000111277 1 3 3 127 1 173530037 173531120 TGTCTACAAGAGACTGGAG 57 173529928 173529946 GCATCCATGTGTATGTCAC 58 NA Mus musculus 50 Hmox1 ENSMUSG00000005413 ENSMUST00000005548,ENSMUST00000098626 1 2 2 113 8 77619863 77620754 AGAAGGCTTTAAGCTGGTG 59 77620831 77620849 TCCTCAGGGAAGTAGAGTG 59 NA Mus musculus 50 Saal1 ENSMUSG00000006763 ENSMUST00000006948 1 1 1 94 7 53964297 53964315 AGCTGATGAGGAAGAACAG 58 53962434 53964239 ATAAAGCCACATCCTCGTC 59 NA Mus musculus 50 Phyhd1 ENSMUSG00000007476 ENSMUST00000095078,ENSMUST00000007620,ENSMUST00000113654 1 3 3 82 2 30112847 30117380 AATAGGATTGAAGCGCTCC 59 30117426 30117444 GACTGCAGTACATTGTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tinf2 ENSMUSG00000007589 ENSMUST00000111342 3 1 3 97 14 56298553 56298928 GCTAAGACTCCATCTCTGG 58 56298474 56298492 TTCTTAGCCTAGCTTGGTG 58 NA InUTR Mus musculus 50 Gabrb2 ENSMUSG00000007653 ENSMUST00000007797 2 1 1 80 11 42405432 42405450 TTGAGCTTCCTCAGTTCTC 58 42405493 42407313 ATCTGGGATAAGAACCTGTG 58 NA Mus musculus 50 Mkl2 ENSMUSG00000009569 ENSMUST00000009713 3 1 1 86 16 13384441 13385711 GATTATAGGTGTGGTGAAGGA 58 13385759 13385777 TCTGGAGACAAAGCATCAC 59 NA Mus musculus 50 Tnfrsf13b ENSMUSG00000010142 ENSMUST00000010286 3 1 3 85 11 60954381 60954399 AAGGAAATCCTGTGTCTCC 58 60954447 60954777 GGCAATTGATGAATTTGCAG 58 NA Mus musculus 50 Raver1 ENSMUSG00000010205 ENSMUST00000115486 1 1 3 223 9 20890885 20890903 TGAAGAAAGACTCAGCAGC 59 20890083 20890699 TACACATGTCTGACAGAAGG 59 NA DesignRelaxed Mus musculus 50 Nanog ENSMUSG00000012396 ENSMUST00000112581,ENSMUST00000112580,ENSMUST00000012540,ENSMUST00000112582 3 4 4 81 6 122661749 122661767 TCAGAAGCAGAAGTACCTC 58 122661810 122662655 GGTCTTAACCTGCTTATAGCT 59 NA Mus musculus 50 Tnfaip8l2 ENSMUSG00000013707 ENSMUST00000013851 3 1 1 60 3 94944323 94944341 CGTGTCCAAAGAATACACG 58 94944281 94944299 GATGAGGTCTTTGATCACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 C4a ENSMUSG00000015451 ENSMUST00000015595 3 1 1 83 17 34952508 34953013 CAAATTGAGAAGGAAGGAGC 58 34952359 34952377 CTCCAACATCTGACCTAGG 58 NA Mus musculus 50 Rabl4 ENSMUSG00000016637 ENSMUST00000016781 3 1 1 82 15 77994675 77994693 GACAAACAGTGGATTCAGC 59 77990130 77994631 CATCTCCTTCACAGATGTCTC 59 NA Mus musculus 50 Vtn ENSMUSG00000017344 ENSMUST00000017488 1 1 1 80 11 78315365 78315383 TATGGACTGGCTTGTACCT 59 78315424 78315658 TTGACTCGGTAGTATTTGTCTC 59 NA Mus musculus 50 Nlk ENSMUSG00000017376 ENSMUST00000017520 1 1 1 80 11 78396877 78396895 CATCACTGGAAGCAATGAG 58 78388420 78396835 GAAGAGATGGCTGTTTATGAG 58 NA Mus musculus 50 BC034902 ENSMUSG00000017914 ENSMUST00000061569 1 1 1 60 2 136327779 136327799 CTTTGTGGATCTCATTCTTGC 59 136327818 136327839 TATCAAGTAGACGGCATATAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Prl8a2 ENSMUSG00000018259 ENSMUST00000018403,ENSMUST00000110363 3 2 2 81 13 27442010 27442867 TGAAACACTTGTTTCACGC 59 27442911 27442930 GTTTGTGACATTAGAGTGGC 59 NA Mus musculus 50 Cyb561 ENSMUSG00000019590 ENSMUST00000106922,ENSMUST00000019734 2 2 2 142 11 105797963 105798956 CCTTCAAGGAGATGCTCTG 59 105797570 105797588 TCTTGTGGTAGTCGAACAC 59 NA Mus musculus 50 Ascl1 ENSMUSG00000020052 ENSMUST00000020243 1 1 1 71 10 86955235 86955253 ACGACTTGAACTCTATGGC 59 86955182 86955200 TAAGAGGGTCGTAGGATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700021K02Rik ENSMUSG00000020096 ENSMUST00000092494,ENSMUST00000092488 3 2 6 82 10 60638718 60642105 ATATCCAAGATATCGCTGGG 58 60642150 60642168 TAAGAATGTGGGCTGAGTC 58 NA Mus musculus 50 Mdm1 ENSMUSG00000020212 ENSMUST00000020437 1 1 1 82 10 117587939 117587957 CAGTGAAGGAACCAAAGTC 58 117588002 117589066 CTCATCTGCCTTCTTTACTG 57 NA Mus musculus 50 Glipr1l1 ENSMUSG00000020213 ENSMUST00000073617 2 1 1 83 10 111509327 111509345 GTGCAGTTTCAAATTGTCC 57 111509391 111513174 CTATAAAGTTTCCTGCTGGC 58 NA Mus musculus 50 Hnrpab ENSMUSG00000020358 ENSMUST00000109103,ENSMUST00000074669,ENSMUST00000101249 1 3 3 128 11 51418003 51418021 GAGCTTCCAATAGATCCCA 58 51416189 51417911 GATTTCACACTTGCTTCCA 58 NA Mus musculus 50 Guk1 ENSMUSG00000020444 ENSMUST00000102702 2 1 2 80 11 58997983 58998002 ACCTGGTGATCATCAATGAC 59 58997674 58997942 GTGCTTTCTTGATTTCCTCAG 59 NA Mus musculus 50 Cdc27 ENSMUSG00000020687 ENSMUST00000106962,ENSMUST00000093923,ENSMUST00000106961 2 3 3 60 11 104397939 104397957 TATGCTTACCGAGATGCAG 59 104396188 104397916 CTTCTGAATGTACTTCTGCA 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Aspa ENSMUSG00000020774 ENSMUST00000021119 3 1 1 82 11 73133344 73133365 CTGTTTATCTCATTGAGCATCC 59 73127106 73133303 ACCAACTTCTATACCAACAGG 59 NA Mus musculus 50 Eral1 ENSMUSG00000020832 ENSMUST00000021183,ENSMUST00000080426 3 2 2 81 11 77891370 77891388 TGTTTCAAAGAAGGTGCAC 58 77889770 77891325 GTCAAGCAGAATCACTTGG 58 NA Mus musculus 50 Slc35b1 ENSMUSG00000020873 ENSMUST00000021243 2 1 1 81 11 95249234 95250405 TTCTTCTGCTCATGTCTCTG 59 95250448 95250467 GAACCTGTTTGGTAATGAGC 59 NA Mus musculus 50 Cacnb1 ENSMUSG00000020882 ENSMUST00000103144,ENSMUST00000017552,ENSMUST00000092736,ENSMUST00000107562,ENSMUST00000107561 2 5 5 83 11 97867047 97867066 AGTCTCAATCCAAACACCTC 59 97866610 97867004 GGATTATGTCAAACATTTCGGG 59 NA Mus musculus 50 Ccnk ENSMUSG00000021258 ENSMUST00000101055,ENSMUST00000021683 3 2 2 80 12 109432598 109433284 TGTAAATGACAGTCTCTGCA 58 109433327 109433345 CCCGCAAGATACATTACTG 57 NA Mus musculus 50 F12 ENSMUSG00000021492 ENSMUST00000021948 1 1 1 85 13 55523386 55523404 AGGGACATGTATCAACACC 58 55523237 55523337 AGCATTTCTCTTTCTGGCA 59 NA Mus musculus 50 Smn1 ENSMUSG00000021645 ENSMUST00000022147,ENSMUST00000091321 2 2 3 120 13 100905662 100905680 AAAGAAGGAAAGTGCTCAC 57 100907405 100907423 CTTAGCCAAGAGTCCACTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Irg1 ENSMUSG00000022126 ENSMUST00000022722 2 1 1 96 14 103448902 103450542 TTAATGGTGTTGCTGTTCAC 58 103450601 103450619 GATAGAGCTGTGAGGACAG 58 NA Mus musculus 50 1500005A01Rik ENSMUSG00000022217 ENSMUST00000022828 2 1 1 94 14 56200569 56200726 CAAGAACTTAGTGATGTGGAG 58 56200495 56200513 CAAAGTCCACAAGATGCTG 59 NA Mus musculus 50 Trio ENSMUSG00000022263 ENSMUST00000090247,ENSMUST00000100733 3 2 2 81 15 27761210 27761780 GAGTGTATGGATACCTACCTG 58 27761149 27761167 TGATGAGCTCCTTGTTGAC 59 NA Mus musculus 50 Enpp2 ENSMUSG00000022425 ENSMUST00000041591 3 1 1 80 15 54713732 54713751 AGTTTATGCCTTCTACTCCG 59 54707302 54713690 AGAGGATTTGTCATCTCAGG 58 NA Mus musculus 50 Cyp2d26 ENSMUSG00000022445 ENSMUST00000006094 3 1 1 75 15 82623042 82623138 GAACATCCCTTCAATCCCA 59 82622985 82623003 GACGAGCATAAATGAGGGA 59 NA DesignNoJunction Mus musculus 50 Pmm1 ENSMUSG00000022474 ENSMUST00000023112,ENSMUST00000071462 3 2 2 103 15 81786152 81786170 TCATTGAGTTCCGGAATGG 59 81783219 81786087 GATCTTCTCCTTCTTGTCCAG 59 NA Mus musculus 50 Calcr ENSMUSG00000023964 ENSMUST00000075644,ENSMUST00000115622 1 2 2 98 6 3641562 3642549 ATTTCCAGGGATTCTTTGTG 58 3637595 3637613 TCCACTGGATCTTGAACTG 58 NA Mus musculus 50 Slc37a1 ENSMUSG00000024036 ENSMUST00000114536 3 1 1 82 17 31459196 31462614 TCTTTCTCATCGAACACCC 59 31465104 31465123 GTTTATGCCATTCTCAGAGG 58 NA Mus musculus 50 4930583I09Rik ENSMUSG00000024088 ENSMUST00000024896 1 1 1 62 17 65183792 65183810 TCTATCTCCAGAGCCAGAG 59 65183667 65183766 TAAATCTGAGCCAAAGCCC 59 NA DesignNoJunction Mus musculus 50 ORF19 ENSMUSG00000024101 ENSMUST00000072383,ENSMUST00000116556 1 2 2 103 17 66467539 66467557 GAAACAGAAGGAGCAGGAG 59 66468213 66468348 TTCCAGAGATACCTTTGCG 59 NA Mus musculus 50 Prss21 ENSMUSG00000024116 ENSMUST00000024928 3 1 1 85 17 24006598 24009344 GAGAAGATGAGAGTCTGCC 59 24009390 24009411 GTACATATGGTTACACATGCTG 59 NA Mus musculus 50 Srbd1 ENSMUSG00000024135 ENSMUST00000043323,ENSMUST00000095187 3 2 3 82 17 86498599 86498617 ATGTGGTTTACTTGCACTG 58 86497950 86498553 TGTTCTGCAGTTGAAATGC 59 NA Mus musculus 50 Zfp521 ENSMUSG00000024420 ENSMUST00000025288 2 1 1 80 18 13876172 13876190 GTCACCTGATAGAGCACAG 59 13873751 13876129 TAGCTTGAACAAACACTGTG 58 NA Mus musculus 50 Dcp2 ENSMUSG00000024472 ENSMUST00000025350 3 1 1 81 18 44565400 44569840 CGTGGAGAAATTGAGTCGA 59 44569885 44569903 CTTAACCCACTGGTCACTC 59 NA Mus musculus 50 Slc4a9 ENSMUSG00000024485 ENSMUST00000115694,ENSMUST00000074298,ENSMUST00000097616,ENSMUST00000115693 2 4 4 111 18 36693646 36694944 CAGAATTCAAGCCTACACTC 58 36695018 36695036 AGGATTGACAGCAGTAGAG 58 NA Mus musculus 50 Ppp2r2b ENSMUSG00000024500 ENSMUST00000069341,ENSMUST00000025377,ENSMUST00000091918 1 3 3 80 18 42822815 42822833 GACCAGAGACTATCTGACC 58 42808409 42822773 TAGTCATGAACCTGGTATGTC 58 NA Mus musculus 50 Slc25a45 ENSMUSG00000024818 ENSMUST00000025732 1 1 1 91 19 5879888 5880098 TAAAGGTGCGGTTACAGAC 59 5880153 5880454 GAAGAAACCCAGGACTGAC 59 NA Mus musculus 50 1700021P04Rik ENSMUSG00000024819 ENSMUST00000025731 3 1 1 60 19 24140528 24140546 CAGCTTCATAGAGCCTGAC 59 24140570 24140588 AGTGTCTCTTTCATCTGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Smarca2 ENSMUSG00000024921 ENSMUST00000025862,ENSMUST00000099537,ENSMUST00000112637 1 3 3 95 19 26846013 26846031 CATAAGTATCGGAGCCTGG 59 26846090 26848671 TTCGTAGATCTGGGATCCT 59 NA Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000041717,ENSMUST00000111662,ENSMUST00000086848,ENSMUST00000061496,ENSMUST00000078917,ENSMUST00000111659,ENSMUST00000111651,ENSMUST00000111649,ENSMUST00000111653,ENSMUST00000111656,ENSMUST00000111646 2 11 15 91 19 55985161 55987056 TTAGTACCACAGCAAGGTC 58 55987110 55987129 ATAGATGCGTTGACTGTCAG 59 NA Mus musculus 50 Limd1 ENSMUSG00000025239 ENSMUST00000026269 3 1 1 80 9 123420382 123425897 CTGATCATGGACATGATCCT 58 123425939 123425958 ACATTCATTACAGATGACGC 58 NA Mus musculus 50 Rplp2 ENSMUSG00000025508 ENSMUST00000084434,ENSMUST00000106004,ENSMUST00000106003 1 3 3 136 7 148634652 148634670 ATTGAGGATGTCATCGCTC 59 148636999 148637146 TCTTTCTTCTCCTCTGCTG 58 NA Nonspecific Mus musculus 50 Rps6ka6 ENSMUSG00000025665 ENSMUST00000096348,ENSMUST00000065976,ENSMUST00000082034,ENSMUST00000113428,ENSMUST00000113427 3 5 6 83 X 108518444 108521079 CTTCATTCTCAAGGAGTCGT 59 108518380 108518398 GATTGAATCTGGATGGGCT 59 NA Mus musculus 50 Orc2l ENSMUSG00000026037 ENSMUST00000027198,ENSMUST00000094930,ENSMUST00000114325 1 3 3 80 1 58529241 58531667 GTCAGTGTGAAATCAATCCT 57 58529180 58529198 CTGATCCAGAACACTTTGG 58 NA Mus musculus 50 Ptp4a1 ENSMUSG00000026064 ENSMUST00000027232,ENSMUST00000076587 3 2 2 80 1 31001505 31001794 ATTCATGTTCTTGACTGGC 58 31001443 31001461 CTTCACAAGACTTAGCCAG 57 NA Nonspecific Mus musculus 50 Xrcc5 ENSMUSG00000026187 ENSMUST00000027379 2 1 1 85 1 72385595 72385614 TCGTCCGATATGCTTATGAC 59 72385661 72386571 AACTAAACACTCATAGGCGT 59 NA Mus musculus 50 Mterfd2 ENSMUSG00000026273 ENSMUST00000027492 2 1 1 137 1 95199395 95199413 GAGTTGTGAAGGTCCTCAG 59 95198354 95199297 CCATCCTGAAATATGCATACTG 58 NA Mus musculus 50 Fcamr ENSMUSG00000026415 ENSMUST00000112477,ENSMUST00000027670 3 2 2 81 1 132701253 132707958 CCTTTCAGGTACAAATGCA 57 132708003 132708021 GTAATGGCAATGGATGGTG 58 NA Mus musculus 50 Rassf5 ENSMUSG00000026430 ENSMUST00000027688,ENSMUST00000068564 1 2 2 80 1 133077780 133077798 GAAGTTCATGGTTGTGGAC 58 133077233 133077736 TTCTGGAAGAGCACTTGTC 59 NA Mus musculus 50 Gfi1b ENSMUSG00000026815 ENSMUST00000028156 1 1 1 81 2 28470858 28470876 GAAGAGTAAGAAGGCACAC 57 28470411 28470813 CACAGGAATTACAGCAGGA 59 NA DesignNoJunction Mus musculus 50 Gtf3c5 ENSMUSG00000026816 ENSMUST00000028157,ENSMUST00000113889 3 2 2 82 2 28427770 28427788 TGCTGTCAAGTCTAACGTC 59 28426738 28427727 GGCCTGTTATCATGTAATAAGC 59 NA Mus musculus 50 4930568D16Rik ENSMUSG00000026882 ENSMUST00000028243 3 1 1 80 2 35221765 35221783 GAAGCACTGTTGCTAATGC 59 35220294 35221722 TAGGTGATCCTTTGTTCTGG 59 NA Mus musculus 50 Ltk ENSMUSG00000027297 ENSMUST00000028759,ENSMUST00000082130 2 2 2 85 2 119578020 119578038 CAACCAGGAGGTTCTAGAC 58 119577879 119577971 TCATGATTCGGTACACTGG 59 NA Mus musculus 50 Bcl2l11 ENSMUSG00000027381 ENSMUST00000110341,ENSMUST00000019281,ENSMUST00000103211,ENSMUST00000103210,ENSMUST00000050696 1 5 6 105 2 127972840 127972858 GGAGGAACCTGAAGATCTG 59 127972927 127983981 ATCATTTGCAAACACCCTC 58 NA Mus musculus 50 Tpx2 ENSMUSG00000027469 ENSMUST00000109816,ENSMUST00000028969 1 2 2 92 2 152693083 152695397 CTCATGGTTTGATGAGAAGG 58 152695451 152695470 TTTCTCAAGGAATTCTTCCC 57 NA Mus musculus 50 Zmat3 ENSMUSG00000027663 ENSMUST00000029199 1 1 1 95 3 32242351 32242486 GTCACTCATTCTCGGACTC 59 32242274 32242294 GATACATATTCCTCCTGGTGG 59 NA Mus musculus 50 Gpsm2 ENSMUSG00000027883 ENSMUST00000029482 2 1 1 80 3 108501984 108503594 CCGAATACTACAAGAAGACAC 58 108501924 108501942 CAAGACTGTAGCAAGACTG 57 NA Mus musculus 50 Ampd2 ENSMUSG00000027889 ENSMUST00000102638,ENSMUST00000102637,ENSMUST00000106668,ENSMUST00000078912,ENSMUST00000106667 1 5 5 121 3 107877876 107877894 AAAGTGAGATGCTGGAGAC 59 107877773 107877791 TCTAATCACGGTCACAGTC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 2510027J23Rik ENSMUSG00000028133 ENSMUST00000106465 3 1 5 276 3 120862669 120862687 GTGAGTGGATCGGAATCAG 59 120861920 120861938 AAGTCTGAGATTCTGCTGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Asph ENSMUSG00000028207 ENSMUST00000108339,ENSMUST00000078139,ENSMUST00000108340,ENSMUST00000029860,ENSMUST00000108337,ENSMUST00000084915,ENSMUST00000108335,ENSMUST00000108334,ENSMUST00000108333,ENSMUST00000076014,ENSMUST00000029858,ENSMUST00000098276 1 12 17 80 4 9525429 9525447 GGAAGTAAGACACCAAGAC 57 9521836 9522533 ATGGTGTTATCTGAAATCGC 58 NA Mus musculus 50 2410005O16Rik ENSMUSG00000028229 ENSMUST00000029888 3 1 2 127 4 19515825 19522230 CTCATAAGTGGTATGCAATCTG 58 19526772 19526790 AGCATCTTTAGGGTTCAGC 59 NA Mus musculus 50 Aptx ENSMUSG00000028411 ENSMUST00000108104,ENSMUST00000108103,ENSMUST00000068125,ENSMUST00000030119 2 4 4 81 4 40644298 40644316 GAAGCTGTTGTGATTGGTC 59 40642442 40644254 CTGCTTTCAACTGTACTTGC 59 NA Mus musculus 50 Epb4.1l4b ENSMUSG00000028434 ENSMUST00000044022 3 1 3 154 4 57032689 57032707 AATCCAGAAAGTCAGCTCG 59 57012587 57029731 CTCTAAAGTCTGCCAGAGG 59 NA Mus musculus 50 Col9a2 ENSMUSG00000028626 ENSMUST00000030372 1 1 1 91 4 120714915 120714933 CAGGTAAAGTTGGTCCTCC 59 120715072 120716309 CATTAAACCATCAATGCCAGG 59 NA Mus musculus 50 Trit1 ENSMUSG00000028653 ENSMUST00000102649,ENSMUST00000082012 1 2 2 80 4 122716760 122716778 GATCAGCTTTGTGGATCCA 59 122716822 122720966 ATATCTTCAATCAGGGCCG 59 NA Mus musculus 50 Zbtb48 ENSMUSG00000028952 ENSMUST00000066715 1 1 1 83 4 151396861 151396879 TGTGGGAAGTGTTACTTCC 59 151396220 151396814 TGTGAAGACCTGTTCTGAG 58 NA Mus musculus 50 Ube4b ENSMUSG00000028960 ENSMUST00000103212,ENSMUST00000084123 2 2 2 80 4 148739636 148742418 TTCAAGCAGATCTTTATCCC 57 148739575 148739594 CTTAAAGTAGTCGCTTTCCA 57 NA Mus musculus 50 Cdc2l1 ENSMUSG00000029062 ENSMUST00000067081,ENSMUST00000105600,ENSMUST00000105598,ENSMUST00000105599 2 4 4 80 4 155023198 155023218 GTATCCCTATAACAACCTCCG 59 155023259 155023539 GTCAGGAACTTGTTCATGAG 58 NA Mus musculus 50 Ablim2 ENSMUSG00000029095 ENSMUST00000114205,ENSMUST00000114210,ENSMUST00000114207,ENSMUST00000114206,ENSMUST00000054598,ENSMUST00000101280,ENSMUST00000114204 3 7 7 162 5 36191511 36191529 TTCCTCTACCTACCAGCAG 59 36199823 36200486 CCAGGTTGTCTTCTTCCTG 59 NA Mus musculus 50 Gtf3c2 ENSMUSG00000029144 ENSMUST00000067186,ENSMUST00000114632,ENSMUST00000114631 3 3 5 99 5 31447116 31447628 CAACTACTATCTCTGGCCTG 59 31444187 31444206 GTTCCAGACAATAGCAACAC 59 NA Mus musculus 50 Slc10a4 ENSMUSG00000029219 ENSMUST00000031127 3 1 1 169 5 73399798 73403080 TACATCGTGAAGGTTTCCC 59 73403213 73403231 GTAGCTAAGCCATAACCCG 59 NA Nonspecific Mus musculus 50 Rsrc2 ENSMUSG00000029422 ENSMUST00000050827,ENSMUST00000057795,ENSMUST00000111515 1 3 3 89 5 124189563 124189581 AAGGATCAGAACTCGTTCC 58 124186682 124189512 TTTCTATCTCGACTTCGACTC 59 NA Mus musculus 50 Tmem116 ENSMUSG00000029452 ENSMUST00000111795,ENSMUST00000094357,ENSMUST00000111794,ENSMUST00000060004,ENSMUST00000078094,ENSMUST00000031405 1 6 6 91 5 121941141 121941159 ATACATCTGTCTGCAGCAC 59 121941212 121943648 GAGTAAGACCATGATGGTGAG 59 NA Mus musculus 50 Psmg3 ENSMUSG00000029551 ENSMUST00000031531 3 1 1 142 5 140302188 140302206 ACATCCTAGTTGTGGTGAC 58 140300010 140302082 AAAGACATGGATGAGAGGC 59 NA DesignNoJunction Mus musculus 50 Ephb6 ENSMUSG00000029869 ENSMUST00000031903,ENSMUST00000114733 2 2 3 101 6 41563403 41563754 TTCTAGCTCTGGAAGAGGT 59 41564080 41564099 CTAGAACACTCACCTCATCC 59 NA Mus musculus 50 Strn4 ENSMUSG00000030374 ENSMUST00000108495,ENSMUST00000019220 2 2 2 80 7 17407884 17407904 GAGAATCTAAAGACGGACCTG 59 17407943 17408370 TTTATGATATTTGGCCCTCTCC 59 NA Mus musculus 50 Tgfb1i1 ENSMUSG00000030782 ENSMUST00000070656,ENSMUST00000033046,ENSMUST00000092080,ENSMUST00000098011 3 4 4 97 7 135392697 135392820 TGTTCAGAACCATCTTCCAG 59 135392880 135392898 CTTTGCTAGTCTGTCCTGG 59 NA Mus musculus 50 Dctn5 ENSMUSG00000030868 ENSMUST00000033156 3 1 1 110 7 129278586 129278604 TATCATCCGAGGAGACCTG 59 129278678 129281773 AAGAATGCAACACCTTTGC 59 NA Mus musculus 50 2310008H09Rik ENSMUSG00000030980 ENSMUST00000063607,ENSMUST00000106549 3 2 5 225 7 125996592 125996610 CTGTAGCACTCACTTGGAG 59 125994186 125996404 TAAGTCTGTGTCTGACTCCT 59 NA DesignNoJunction Mus musculus 50 Wdr13 ENSMUSG00000031166 ENSMUST00000033506,ENSMUST00000115623 3 2 2 92 X 7703317 7704946 TACTCTACAGAGTGGTGGA 58 7703243 7703261 AGAAGATACTGCGTACAGG 58 NA Mus musculus 50 Atrx ENSMUSG00000031229 ENSMUST00000113573,ENSMUST00000113574,ENSMUST00000033580,ENSMUST00000087810,ENSMUST00000101305 3 5 5 81 X 103083173 103084345 TCAAGGTCAAAGAGGAAACC 59 103083111 103083131 CATTTACATTCTCATCCGTGG 59 NA Mus musculus 50 Il2rg ENSMUSG00000031304 ENSMUST00000033664 3 1 1 80 X 98461567 98461585 GTGGAAGTTCTCAACAGTG 58 98461051 98461523 ACAAGGAAGGATTCTCCTC 58 NA Mus musculus 50 Atp2b3 ENSMUSG00000031376 ENSMUST00000088429,ENSMUST00000114480,ENSMUST00000114479,ENSMUST00000033744 3 4 4 83 X 70790572 70790712 GAAAGGCGAGATTGAACAG 58 70790757 70790777 TGTTTATCAGTGGGAGATGAC 59 NA Mus musculus 50 Figf ENSMUSG00000031380 ENSMUST00000033751 3 1 1 87 X 160833958 160838606 GACAGAAGACCACTCTTACC 59 160838656 160838674 TTTACAGACGCACTCACAG 59 NA Mus musculus 50 Tnfsf13b ENSMUSG00000031497 ENSMUST00000033892 1 1 1 87 8 10031347 10031365 AAGAGGAAATGCCTTGGAG 59 10031416 10031517 CGTGTATAGAACCTGGCTG 59 NA Mus musculus 50 Rbpms ENSMUSG00000031586 ENSMUST00000033994,ENSMUST00000053251,ENSMUST00000033995 3 3 3 89 8 34944835 34944853 AGAACAAACTCGTAGGGAC 58 34917311 34944782 CTGTGAGCTCATATGGCTC 59 NA Mus musculus 50 Rfx1 ENSMUSG00000031706 ENSMUST00000005600 2 1 1 122 8 86619382 86619400 GTACTACCTGATCGAGCAC 59 86619562 86619705 TCTTCTTCATCTTTGTCAGGG 59 NA Mus musculus 50 Dhodh ENSMUSG00000031730 ENSMUST00000069058,ENSMUST00000034166 1 2 2 101 8 112127393 112130116 AACATGCTGGAAGTGAGAG 59 112127310 112127329 CTTATAGAGTCCGTCCACAG 58 NA Mus musculus 50 Adamts8 ENSMUSG00000031994 ENSMUST00000068135 3 1 1 91 9 30766882 30766901 TAAGAAGCTGGACAAATGTG 58 30766955 30769243 TGTAGCCATAACTGAAGGG 58 NA Mus musculus 50 Kif23 ENSMUSG00000032254 ENSMUST00000034815,ENSMUST00000055275 3 2 2 80 9 61792061 61792080 TCAATAGTACAACCCTGCAG 59 61785333 61792022 AGTACTGAGTCTCCTTATAGTCC 59 NA Mus musculus 50 Nrg4 ENSMUSG00000032311 ENSMUST00000034861 3 1 2 151 9 55128786 55130371 TAAGATGCCAACAGATCAC 57 55107244 55107262 CGAATGGTTTAAGTAGGCA 57 NA InUTR Mus musculus 50 Pstpip1 ENSMUSG00000032322 ENSMUST00000059206 2 1 1 82 9 55974406 55974424 AACTACTATGACAGGGAGG 57 55974469 55975300 CCAGAGAACCTCTTTATCAC 57 NA Mus musculus 50 Tinag ENSMUSG00000032357 ENSMUST00000034911 3 1 1 83 9 76849558 76853444 AAACGTGGACTGGTATCTC 58 76849493 76849511 TCTACTTGCCATAGCACAG 59 NA Mus musculus 50 Nt5e ENSMUSG00000032420 ENSMUST00000034992 2 1 1 83 9 88250546 88250565 TATCGCTCAGAAAGTTCGAG 59 88250611 88258289 TTGGAAGGTGGATTTCCTG 59 NA Mus musculus 50 Mrps22 ENSMUSG00000032459 ENSMUST00000035034 2 1 1 83 9 98497394 98498563 GTTGGAAGAGGCTACTAGAC 59 98497330 98497348 ATTGGCTTTCGTTCTTCCA 59 NA Mus musculus 50 MGI:1330303 ENSMUSG00000032534 ENSMUST00000093791,ENSMUST00000016523 2 2 2 80 9 102505400 102509668 GGAGATAATCCAGGCTCAG 58 102505338 102505356 TGTTGAATTTCTGACTGGC 58 NA Mus musculus 50 Rspo4 ENSMUSG00000032852 ENSMUST00000042217 3 1 1 91 2 151693668 151694312 AACAGGTGCAAGAAATGTG 58 151694366 151694385 CCTTTGTATAGGTGAAACCG 58 NA Mus musculus 50 Rag2 ENSMUSG00000032864 ENSMUST00000111227,ENSMUST00000044031 3 2 2 60 2 101470560 101470580 GAGGATTTGAGTGAAGATCAG 58 101470601 101470620 CAGGATCTTCTGTTGATGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Slc22a15 ENSMUSG00000033147 ENSMUST00000106928 3 1 1 89 3 101681927 101683945 CTGATGTTCATCTGGTTTGTG 59 101681858 101681876 CAGGTTGGCATAAATGCTG 59 NA InUTR Mus musculus 50 Mnd1 ENSMUSG00000033752 ENSMUST00000047368 3 1 1 150 3 83897514 83908867 GGAAGAGATACGTGAAGCA 59 83892002 83892022 GTCAAAGTCTTCTGGAATTCC 58 NA Mus musculus 50 Calm4 ENSMUSG00000033765 ENSMUST00000042219 1 1 1 60 13 3837317 3837335 ATGGTGATGGCAAGATCAG 59 3837356 3837377 CCTTTCTTGTACTTCTCTATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Exoc6b ENSMUSG00000033769 ENSMUST00000046334,ENSMUST00000051531,ENSMUST00000101224 1 3 4 85 6 84953269 84954990 GCAAGGAACTGGTAATAGC 58 84953202 84953221 CATTAGCTTATCGACAGTGG 58 NA Mus musculus 50 Rnf43 ENSMUSG00000034177 ENSMUST00000092800,ENSMUST00000040089 3 2 2 88 11 87543723 87544534 GTTCAACATCGTAGAGGGAG 59 87544584 87544603 GAATGAGGTGGAGTCTTCTG 59 NA Mus musculus 50 Zfyve9 ENSMUSG00000034557 ENSMUST00000106657,ENSMUST00000106658,ENSMUST00000106660,ENSMUST00000042185 1 4 4 80 4 108361801 108361820 AGTGCAATGAACCTTATTCC 58 108357623 108361758 TTCCACAGCATAATCTCCT 57 NA Mus musculus 50 Scn7a ENSMUSG00000034810 ENSMUST00000042792 2 1 1 80 2 66530610 66530629 GATAGTAGAGAACAGCTGGT 58 66527749 66530567 ATGTCTTCAAGAGCCAGAG 58 NA Mus musculus 50 Acot11 ENSMUSG00000034853 ENSMUST00000065253,ENSMUST00000102762 1 2 2 80 4 106426723 106426742 ATACCTTGTGTCCTGTAAGC 59 106426386 106426682 TAGTAGCTCAGGTATACCTGG 59 NA Mus musculus 50 AK129302 ENSMUSG00000035062 ENSMUST00000044382 2 1 1 95 X 92838816 92840663 CATGCTGATATCAATGTGATGG 59 92838742 92838761 ATACTCATCATGAAGCCTCC 58 NA Mus musculus 50 Heg1 ENSMUSG00000035500 ENSMUST00000052624 3 1 1 99 16 33710698 33710717 CAGAAGAGAAATTCATCCGG 58 33710779 33719604 TACTTCCAGAAGACGATGG 58 NA Mus musculus 50 Dync1li2 ENSMUSG00000035770 ENSMUST00000041769 3 1 1 115 8 106952077 106953328 ATTCTGCCTCCAGTATGGA 59 106951980 106951999 GTATGGTAAAGTGGAAGCCA 59 NA Mus musculus 50 Krt222 ENSMUSG00000035849 ENSMUST00000103132,ENSMUST00000038214 2 2 2 162 11 99099902 99099920 TTCTCAACACGAAGATGAG 57 99097571 99097785 TCATTTATAATGGCTGAGGG 57 NA Mus musculus 50 Smug1 ENSMUSG00000036061 ENSMUST00000064067,ENSMUST00000108816 3 2 2 268 15 102988114 102988132 CTATGTGACTCGCTACTGC 59 102986449 102986467 GGAAGAAGACTTGAGGCTG 59 NA DesignNoJunction Mus musculus 50 Prr5 ENSMUSG00000036106 ENSMUST00000065499 2 1 1 92 15 84531846 84531864 TGATTCAGAAGGTGGTGTC 59 84531919 84533156 ATCGTTTCTCGAGGATACAG 58 NA Mus musculus 50 Eepd1 ENSMUSG00000036611 ENSMUST00000040677 1 1 1 95 9 25402329 25411000 AAGTGTTCACAGGTCACTG 59 25411059 25411077 AATGTTCAGAAGCGACTCC 59 NA Mus musculus 50 Acaa2 ENSMUSG00000036880 ENSMUST00000041053 1 1 1 80 18 74958811 74960954 CTACTATCATGGGTATTGGTCC 59 74960992 74961013 AATCCATGTCCTTAAGACTCAG 59 NA Mus musculus 50 C1ql2 ENSMUSG00000036907 ENSMUST00000037286 2 1 1 60 1 122239056 122239074 GATGAAGTCTACGTGAAGC 57 122239097 122239116 TGTACTTGTTATTGTTGCCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zic4 ENSMUSG00000036972 ENSMUST00000066384,ENSMUST00000085242 3 2 2 114 9 91279063 91279081 GGCTATAACGTCTGCTCTC 59 91279159 91281382 CAAGCAACATCATTCGCTC 59 NA InUTR Mus musculus 50 Phf16 ENSMUSG00000037315 ENSMUST00000115384,ENSMUST00000043693 1 2 2 80 X 20039305 20056646 GAAGTCTGCTGAGGTATTCC 59 20056687 20056707 TAGCTGTCAGGATTAACATGG 59 NA Mus musculus 50 2810485I05Rik ENSMUSG00000037808 ENSMUST00000059579 1 1 1 80 9 13637548 13637566 CAGCACCATTCTAAACACC 58 13637610 13640341 TAGACTGCTGACTTTGTGG 59 NA Mus musculus 50 Bicd2 ENSMUSG00000037933 ENSMUST00000048544,ENSMUST00000110085 1 2 2 97 13 49476009 49476027 ATGATGAAGCTACGGAACG 59 49476088 49478426 ATGTATTCGTCACACCTGG 59 NA Nonspecific Mus musculus 50 Wdr20a ENSMUSG00000037957 ENSMUST00000095410,ENSMUST00000109807 1 2 3 189 12 112017517 112017538 GAGTAAACCCATAGATAAGAGG 57 112017685 112031341 GGACTTGTCTATTAGTCTTTCC 57 NA Mus musculus 50 Rbm12 ENSMUSG00000038171 ENSMUST00000109604,ENSMUST00000059647 2 2 2 60 2 155922623 155922642 CTGACTATAAGGCTGCTCTC 59 155922582 155922601 ACTTGAATAAAGCGATTGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Asb10 ENSMUSG00000038204 ENSMUST00000048302 3 1 1 82 5 24039978 24039997 CCTGATGAATACATACCGTG 57 24039648 24039936 CATGGTACTTCTGTAGAATCTC 57 NA Mus musculus 50 Pcp4l1 ENSMUSG00000038370 ENSMUST00000111332,ENSMUST00000045704 3 2 2 271 1 173126286 173126304 CAGCATTAAGCAACAGCTC 59 173104603 173104624 GGTCAATGTCAATTTCTTCCTC 59 NA DesignNoJunction Mus musculus 50 BC018465 ENSMUSG00000038572 ENSMUST00000045959 3 1 1 80 2 154052922 154053808 CATTCCTAGAGATCCTCTGG 58 154053851 154053869 GGGTCTTGTTCCCTATCTG 59 NA Mus musculus 50 2310066E14Rik ENSMUSG00000038604 ENSMUST00000109346,ENSMUST00000043531 3 2 2 80 8 108144845 108144864 AGTTATGTAGAAGCCTTGGA 58 108144905 108145030 GTTCTGTACTAGTAACACCTC 57 NA Mus musculus 50 Lefty1 ENSMUSG00000038793 ENSMUST00000037361 1 1 1 127 1 182867372 182867747 CTCAAGGACTATGGAGCTC 58 182867838 182867856 TCTAGGATCCAGTTCTCGG 59 NA Nonspecific Mus musculus 50 Isg20 ENSMUSG00000039236 ENSMUST00000038142 3 1 2 132 7 86061610 86064940 GAACATCCAGAACAACTGG 58 86065036 86065054 TGAAGTTCAGTCTGACGTC 59 NA InUTR Mus musculus 50 Fndc3b ENSMUSG00000039286 ENSMUST00000046157 2 1 1 80 3 27369261 27387170 GAATGGGATGAGGGAAAGAG 59 27369200 27369218 GAGCTTTGTCAGTTTGCAG 59 NA Mus musculus 50 1810049H13Rik ENSMUSG00000039670 ENSMUST00000044007 1 1 1 92 11 120318475 120319143 CTGAGAGCTTTCTTCAGGG 59 120318401 120318419 TATCAGTGACTTGCACTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rnf213 ENSMUSG00000039895 ENSMUST00000052282 1 1 1 60 11 119255215 119255233 GGAGAGTCCATTCAGTGTG 59 119255257 119255275 ACATTCTGTGTAACTCGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ythdf2 ENSMUSG00000040025 ENSMUST00000102570,ENSMUST00000040654 2 2 2 219 4 131761614 131766670 GCCGAATAATGCATATACTGC 59 131761415 131761433 AAATGGAGTGCTACCTAGG 58 NA DesignNoJunction Mus musculus 50 2210010C17Rik ENSMUSG00000040498 ENSMUST00000043440 1 1 1 122 7 20524614 20524632 GACTACATGTCGGTCTCAG 59 20523588 20524531 CGTTCCTTATTTCTTAAGTGCC 59 NA InUTR Mus musculus 50 Clcf1 ENSMUSG00000040663 ENSMUST00000046506 1 1 1 109 19 4220244 4220262 TTAATCGCACAGGAGATCC 59 4220335 4222082 GTAGTTCAGGTAGGTCCCA 59 NA Mus musculus 50 Col16a1 ENSMUSG00000040690 ENSMUST00000044565,ENSMUST00000097866 3 2 5 208 4 129774176 129775049 GTTTGATGAGAGGATGGCT 59 129775415 129775433 TTTCACCTTTGGTACCAGG 59 NA DesignRelaxed, InUTR Mus musculus 50 S100g ENSMUSG00000040808 ENSMUST00000038769 1 1 2 128 X 159402094 159402112 CTCCTGCAGAAATGAAGAG 57 159400163 159402002 TACTTGAAGCCTTCAGGAG 58 NA Mus musculus 50 B4galnt3 ENSMUSG00000041372 ENSMUST00000057283 1 1 1 80 6 120159295 120159315 ATCACAGACTATAGCAGTGAG 58 120158981 120159253 CTTCAGGTACTGGTAGCTC 58 NA Mus musculus 50 Jarid1b ENSMUSG00000042207 ENSMUST00000112198,ENSMUST00000047714,ENSMUST00000112197 3 3 3 80 1 136484551 136484570 AGCTACAAGGAAGTACTCTG 58 136484610 136485363 CTGCGACTAACTTATTTAGCTG 59 NA Mus musculus 50 C330023M02Rik ENSMUSG00000042719 ENSMUST00000042163 1 1 1 80 5 121887649 121887669 GAAGTTACAGATGGCAATGTG 59 121887708 121888751 GATGACAGAAATAGTCTCAACG 58 NA Mus musculus 50 Trpv3 ENSMUSG00000043029 ENSMUST00000049676 3 1 1 81 11 73099528 73100859 CACCAACATTGATAACCGAC 59 73100902 73100921 GGCAAATTTCTTCCATTTCG 58 NA Mus musculus 50 Fem1a ENSMUSG00000043683 ENSMUST00000060253 3 1 1 122 17 56398072 56398090 ATCATGGATGCTCTCATCG 59 56398176 56398194 ATAATTGAAAGGCTGCACG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Dmrta1 ENSMUSG00000043753 ENSMUST00000052478 2 1 1 60 4 89358138 89358156 AGAAACTGTGAGTCATGCC 59 89358179 89358198 AATGGTGATGAGTGTTGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC024139 ENSMUSG00000044361 ENSMUST00000054022,ENSMUST00000089654,ENSMUST00000068344 1 3 3 67 15 75951893 75951911 AGAGAAGTTGGTCTTGTGC 59 75951584 75951862 CTTGTACCACCTTGATCCC 59 NA DesignRelaxed, InUTR Mus musculus 50 Cage1 ENSMUSG00000044566 ENSMUST00000110233,ENSMUST00000074969,ENSMUST00000089840 3 3 3 80 13 38115334 38117166 TATAAAGCAGAGGAGCCTG 58 38115272 38115291 CTGGTGACTAACTGATAGCT 58 NA Mus musculus 50 Ly6k ENSMUSG00000044678 ENSMUST00000060301 3 1 1 115 15 74628972 74628990 GAAATTCTGTTTGTTGGCC 57 74627612 74627630 ATGGTGGATTAGTGCTAGG 58 NA DesignNoJunction Mus musculus 50 2410002F23Rik ENSMUSG00000045411 ENSMUST00000055858,ENSMUST00000107950,ENSMUST00000107949,ENSMUST00000107948,ENSMUST00000084937,ENSMUST00000071296 3 6 6 86 7 51504935 51504954 AGTTAACATCCAGACTGGAC 59 51505424 51505691 TTGTAGAAACCACCTGGAG 58 NA Nonspecific, InUTR Mus musculus 50 Fpr1 ENSMUSG00000045551 ENSMUST00000061516 3 1 1 60 17 18013871 18013889 ATTTCAAGTAGTGGCCCTC 59 18013829 18013847 AGTCATGTTCTTCAACCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Spin2 ENSMUSG00000046550 ENSMUST00000049999 1 1 1 60 X 150268018 150268038 GAACTTCACAGAGATGAAAGG 58 150268060 150268078 AGAACGACACCTTATCAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Fat4 ENSMUSG00000046743 ENSMUST00000061260 3 1 1 82 3 38901829 38901847 AAATTCAGGACTCGGAGTG 59 38901890 38906024 CCATTCTTAATCTTCACTGTGG 59 NA Mus musculus 50 Mipol1 ENSMUSG00000047022 ENSMUST00000056019 3 1 3 166 12 58433436 58465121 CTTTGTCTCAGTGCAAACG 59 58515331 58515350 CTGTTCAACTGCAGTTTCTC 59 NA Mus musculus 50 Irs3 ENSMUSG00000047182 ENSMUST00000057314 1 1 1 125 5 138086422 138086440 CATCTATACCAGCGACAGC 59 138085969 138086333 AAACCCATAGCAGTAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cdh19 ENSMUSG00000047216 ENSMUST00000094626 3 1 1 80 1 112845751 112845770 ATCAATGACAATGAACCCAG 58 112828832 112845708 GACAAATGTTCCTTCTGGA 57 NA Mus musculus 50 Pcdhb13 ENSMUSG00000047307 ENSMUST00000056915 1 1 1 60 18 37603260 37603279 ATCCTATCCTCACTCAACAG 58 37603301 37603320 ATACTGCCACTATGATACCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:2177522 ENSMUSG00000047444 ENSMUST00000050678 2 1 1 60 11 73858221 73858239 ACTTCTACTGTGACCTTCC 58 73858179 73858197 CCATTGAGGTAGATGCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Baiap3 ENSMUSG00000047507 ENSMUST00000056357 2 1 1 80 17 25382492 25382598 CACCTGACTTCCAAGATGG 59 25382430 25382449 ATCGTTCTGAATCGAGTCAG 59 NA Mus musculus 50 BC029214 ENSMUSG00000047617 ENSMUST00000114261 2 1 2 87 2 25315368 25315537 TCTTACCAGAACTTGATCACC 59 25315301 25315319 AAGCCAGGGTTAATGAGAG 58 NA Mus musculus 50 Gal3st3 ENSMUSG00000047658 ENSMUST00000061169 3 1 1 188 19 5302576 5302594 ATCCACCAAGATGATGAGC 59 5306798 5306816 TTGTGAGTCTTCAGGAAGG 58 NA DesignNoJunction Mus musculus 50 Cyb561d1 ENSMUSG00000048796 ENSMUST00000106655,ENSMUST00000065664,ENSMUST00000106654 1 3 3 64 3 108002191 108002209 GACTACCATTGTACCCAGC 59 108002145 108002163 CTTCCTTGGCAAGTAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm962 ENSMUSG00000049562 ENSMUST00000096318 2 1 1 82 19 5568539 5568557 GAAGGTGAGGATTTGGGTC 59 5568602 5568717 GTCAGTAAGGAAACCTTGGT 59 NA Mus musculus 50 V1ri8 ENSMUSG00000049669 ENSMUST00000054679 2 1 1 110 13 22237309 22237329 GTGCACTTACACAATACACTG 59 22237219 22237239 GCTAAAGCTAGGAATAACCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Arhgap23 ENSMUSG00000049807 ENSMUST00000107602,ENSMUST00000107601,ENSMUST00000093940 1 3 3 157 11 97352483 97352501 CAACATCGAGTACCTCCTG 59 97361468 97361486 CAGAGATGAAGGAGATCGC 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 2610019F03Rik ENSMUSG00000050052 ENSMUST00000062613 2 1 1 123 8 13954127 13955729 AGTCCAAAGGAACTAACCA 58 13954022 13954040 CAACCTTCGATCTGATCTG 57 NA Mus musculus 50 Nudt6 ENSMUSG00000050174 ENSMUST00000108117 2 1 5 263 3 37318444 37318463 GTTCTCCACATTGCTTTACG 59 37304408 37308441 CTGTGTCTGCAATATCTTCTC 58 NA DesignRelaxed Mus musculus 50 3110021A11Rik ENSMUSG00000050604 ENSMUST00000062454 1 1 1 181 6 119798465 119798483 ATATTGAGCGAGGAAGGTG 59 119798628 119798646 TTATTTCCTAAGGTGGCGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rtn4rl2 ENSMUSG00000050896 ENSMUST00000054514 1 1 1 117 2 84720635 84720653 ACTACACCTGTATCGTTGC 59 84712844 84720556 CAAGTCATCCTGTAGATGGAG 59 NA Mus musculus 50 Olfr335 ENSMUSG00000051052 ENSMUST00000050332 2 1 1 60 2 36157646 36157666 AAGCTAGTCATCTTCACTGAG 59 36157688 36157706 CCATGATGCTACTCAGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tas2r105 ENSMUSG00000051153 ENSMUST00000053652 1 1 1 60 6 131637051 131637072 TGCTAACTTCATGGGTAATCTC 59 131637012 131637031 ACTTTACCGTCCTTCATCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2900026A02Rik ENSMUSG00000051339 ENSMUST00000050125 1 1 1 172 5 113526763 113526781 CATATACCGAGTCCACGTC 59 113524776 113526628 TGAGGTTTGATGGATGAAGG 59 NA Mus musculus 50 Olfr272 ENSMUSG00000051593 ENSMUST00000107667,ENSMUST00000051600 2 2 2 60 4 52924129 52924147 TCATTCACCACTTCGTCTG 59 52924087 52924105 GAAATATCTGCACAAGCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 4930473A06Rik ENSMUSG00000052407 ENSMUST00000053414,ENSMUST00000055626 3 2 3 81 4 83342326 83388835 GGAGAAGCTGTTAAGAGTC 57 83388880 83388898 GATGTCTATTGAGCTGACG 57 NA Mus musculus 50 Bmpr1b ENSMUSG00000052430 ENSMUST00000029948,ENSMUST00000106232,ENSMUST00000098568,ENSMUST00000106230 3 4 4 80 3 141505970 141508050 GTTTCTGGAGGTATAGTGGA 58 141505909 141505929 TCTCATGTCCTCATAAGAAGG 58 NA Mus musculus 50 EG215472 ENSMUSG00000053420 ENSMUST00000065826 2 1 1 80 10 93757973 93757993 CTATATCCCAAGAATTGAGCC 57 93756706 93757932 ATATCAAAGGTACACCTCGT 58 NA Mus musculus 50 Ech1 ENSMUSG00000053898 ENSMUST00000066264 1 1 1 80 7 29611225 29611246 AAAGATATCCAAAGACTCGGAC 59 29611285 29614831 ATGAGGTCAATACCTGAAGTG 59 NA Mus musculus 50 Tdrd9 ENSMUSG00000054003 ENSMUST00000079009,ENSMUST00000109765 1 2 2 80 12 113279899 113279920 GTCTCATGTAGACCTAGATCTC 58 113279960 113280913 ATCTTGAATTCCAAAGCCTG 58 NA Mus musculus 50 Adam12 ENSMUSG00000054555 ENSMUST00000067680 3 1 1 82 7 141101640 141104511 ATCAGGCAAGCAGATAACC 59 141101576 141101594 TACACCACAAATCCAGCAG 59 NA Mus musculus 50 Mgmt ENSMUSG00000054612 ENSMUST00000081510 2 1 1 80 7 144277782 144313181 GTTCCAGCAAGATTCATTCAC 59 144313222 144313241 TGGTAAGAAACCGTTTCTCC 59 NA Mus musculus 50 Zscan22 ENSMUSG00000054715 ENSMUST00000055528 2 1 1 80 7 13489409 13489427 TATGACTCAACTGCTGGAC 58 13491619 13491637 TCTGTATTGCTCTGTTTGC 58 NA DesignNoJunction Mus musculus 50 Msra ENSMUSG00000054733 ENSMUST00000067927 2 1 2 120 14 64904014 64932535 TGGCTGTATTTGGAATGGG 59 64903912 64903930 TCTTTGTAGGTGGGATTGC 59 NA Mus musculus 50 C1r ENSMUSG00000055172 ENSMUST00000074590 2 1 2 131 6 124525335 124525353 TTACTTCACTGTCACCTGC 59 124527095 124527403 CAGTTCTTGATCTTGCACC 58 NA Mus musculus 50 Fev ENSMUSG00000055197 ENSMUST00000068631 1 1 1 218 1 74931017 74931035 TTTAAGGAAGGGAAGAGCC 58 74929073 74929091 GTTCATGTTAGGCTTGCTC 58 NA DesignNoJunction Mus musculus 50 Gucy2g ENSMUSG00000055523 ENSMUST00000069183 1 1 1 80 19 55302721 55304212 TCAGAAAGTAATCAGACCCT 57 55302660 55302678 CAGCCAGGTTTATACTCAG 57 NA Mus musculus 50 ENSMUSG00000055790 ENSMUSG00000055790 ENSMUST00000069526 2 1 1 60 11 120240528 120240546 GTGATTCTACAGCAGAGGA 58 120240569 120240588 AATGTGGTTTCCCTTAGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 H2-T9 ENSMUSG00000056116 ENSMUST00000077960,ENSMUST00000058801,ENSMUST00000080015 3 3 3 104 17 36175993 36176133 GTGGATGATGAGGAGATGG 59 36175699 36175717 AGGTGACAGTAAAGACTCG 58 NA Nonspecific Mus musculus 50 B4galt6 ENSMUSG00000056124 ENSMUST00000070080 3 1 1 81 18 20847838 20850907 CAAGTACATGTACATTCTTCCC 58 20847778 20847798 GTTGATCTTCCTGAATTGCTC 59 NA Mus musculus 50 Actr3b ENSMUSG00000056367 ENSMUST00000070431,ENSMUST00000088244 2 2 2 86 5 25338219 25338237 TTTATGGAGTCCATCTCGG 58 25338287 25354188 AACGACGTTCTTATACAGC 57 NA Mus musculus 50 Apol8 ENSMUSG00000056656 ENSMUST00000070911 1 1 1 132 15 77585651 77585669 ATCAAGAGGTCTACCATGC 58 77583340 77583676 ATGAAGGTTCTGTCTCCTG 58 NA InUTR Mus musculus 50 Mab21l1 ENSMUSG00000056947 ENSMUST00000075422 3 1 1 60 3 55587351 55587372 AGAGATGTAGTAAAGATGGTGG 59 55587393 55587411 ACCTATCTCGGATTCTCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr397 ENSMUSG00000057050 ENSMUST00000074250,ENSMUST00000108465 3 2 2 60 11 73778726 73778745 TGTCATTATTGTCCCATTCC 57 73778768 73778786 AATGGAGGACACTATTCGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cyp2d13 ENSMUSG00000057088 ENSMUST00000014525 1 1 1 81 15 82469549 82469706 GAAATGGAGAAGGCAAAGG 58 82469486 82469504 CACCAAACAGGTCAAAGAC 58 NA Mus musculus 50 Olfr792 ENSMUSG00000057300 ENSMUST00000076575 1 1 1 60 10 128977968 128977986 GTAAGCCCTTGCATTACAC 58 128978010 128978028 CTCACAATAAGCTGCATGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ugt2b37 ENSMUSG00000057425 ENSMUST00000075858 3 1 1 64 5 87679721 87680813 AACCTTTGCCTAAGGATATGG 59 87679677 87679695 AAAGACCACTACACCATGG 59 NA DesignRelaxed Mus musculus 50 Bak1 ENSMUSG00000057789 ENSMUST00000025034 1 1 2 96 17 27159429 27159447 TACTAGAACAGCTTCAGCC 58 27158280 27158614 ACTCTTAAATAGGCTGTGCA 59 NA Mus musculus 50 V1rf3 ENSMUSG00000058030 ENSMUST00000077301 1 1 1 60 17 21451046 21451066 CAACTCCTTCTTAGTCTACCA 58 21451088 21451106 GAACTTTAGTCTGCACCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp708 ENSMUSG00000058883 ENSMUST00000109743,ENSMUST00000109742 1 2 3 91 13 67175826 67175844 GAATGTCTGGACTCTGCTC 59 67175102 67175772 TTAGAGAAAGCAAGACCCAG 59 NA Nonspecific Mus musculus 50 1700018C11Rik ENSMUSG00000058935 ENSMUST00000102861,ENSMUST00000073768,ENSMUST00000102862 1 3 3 81 4 63268441 63269502 GTGATTATGAAGAGCTGACTG 58 63268380 63268398 CAGTGTTCCTGGTAGTAGC 59 NA Mus musculus 50 Olfr539 ENSMUSG00000059136 ENSMUST00000078967 3 1 1 60 7 147853793 147853812 TGTGAATAGCATTCTGACTC 57 147853835 147853853 TAGCATGAAGTTGATGCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr171 ENSMUSG00000060480 ENSMUST00000079891 1 1 1 62 16 19625172 19625190 TGGAACGTGAGAACTACAC 59 19625128 19625146 TTGAAGAGGAGAACAGTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 V1rc12 ENSMUSG00000060699 ENSMUST00000071414 3 1 1 60 6 66629238 66629258 AGGATCATCTATACTGGTGCT 59 66629198 66629217 TAATCACCTTCAACTGGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr325 ENSMUSG00000060765 ENSMUST00000076902 2 1 1 60 11 58395236 58395257 AGGAATAAGAATGTCACAGAGG 59 58395276 58395296 CTTGAAAGAAGGGTTTCACAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr566 ENSMUSG00000060888 ENSMUST00000071393 3 1 1 60 7 110004974 110004994 GTCTCTGGTACATCGATATGG 59 110004934 110004952 ATTGGCCATCATTGTATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Slc4a4 ENSMUSG00000060961 ENSMUST00000113216 2 1 5 179 5 89457451 89467494 GAGGTGGATTAAGTTTGAAGAG 58 89467634 89469398 GATTCTCCCAACAACTCCA 59 NA Mus musculus 50 EG622282 ENSMUSG00000060975 ENSMUST00000079069 3 1 1 77 2 104551865 104551883 CAGAAAGGGTCTTTCAAGC 58 104551922 104551942 GTTTACGACGAAATCTGAACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC003940 ENSMUSG00000061111 ENSMUST00000034913,ENSMUST00000075027 3 2 2 177 11 120405313 120406006 TCATTTATGAAGCCTGGCA 59 120404999 120405017 TAGGACTTCTTGGCATCCT 59 NA Mus musculus 50 Kalrn ENSMUSG00000061751 ENSMUST00000114973,ENSMUST00000076810,ENSMUST00000074924,ENSMUST00000023522,ENSMUST00000114968,ENSMUST00000099959,ENSMUST00000114961 2 7 13 218 16 34055107 34055125 GAACTCCATCCACAGTTCC 59 34053740 34054925 TTCTTGCTCTTCTCGTCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Es22 ENSMUSG00000061959 ENSMUST00000034173 3 1 1 80 8 95725469 95725752 TTGCTAGGAATGGGAATCC 59 95725407 95725426 CAATCTGCAGATAACCTTCC 58 NA Mus musculus 50 4930431F12Rik ENSMUSG00000062496 ENSMUST00000079389 1 1 1 176 5 45358215 45358233 CTCTGTATTCCACACCGTC 59 45358373 45359037 TACAAGTTTCACTGGGCAG 59 NA Nonspecific Mus musculus 50 Btnl1 ENSMUSG00000062638 ENSMUST00000080254,ENSMUST00000114181 2 2 2 106 17 34514914 34516449 CTCTGGAGAAGTGTCTTGG 59 34516519 34516537 CACTCTGTTCAGGAGACAG 59 NA Mus musculus 50 2900042B11Rik ENSMUSG00000063172 ENSMUST00000054209 1 1 3 165 4 106935173 106936100 CATCATTGATGGTCCTGCT 59 106936229 106936247 ACTGAACATATCCGCACAG 59 NA Mus musculus 50 1700112E06Rik ENSMUSG00000063458 ENSMUST00000075639 1 1 1 80 14 23403751 23415651 GACTATAAGAGATACAGGTGCT 58 23415692 23415710 TTGTCTGGTGACTTTCTGG 59 NA Mus musculus 50 Eno1 ENSMUSG00000063524 ENSMUST00000080926,ENSMUST00000051986,ENSMUST00000080149 1 3 3 106 4 149619435 149620685 AGAACAAAGAAGCACTGGA 59 149620755 149620773 AGACCTGTAGAACTCGGAG 59 NA Nonspecific Mus musculus 50 Glyat ENSMUSG00000063683 ENSMUST00000044976 2 1 1 80 19 12724851 12724869 AAGAAACTGTTCCCTTCCC 59 12724913 12725731 CTTGTCTTGATCAATGGCC 58 NA Mus musculus 50 Dhrs3 ENSMUSG00000066026 ENSMUST00000105744,ENSMUST00000084184,ENSMUST00000105745 1 3 3 120 4 144509971 144513815 CATGAGAGTCAGGTTTCCC 59 144513899 144513917 GATATTCATGGTCCACGGG 59 NA Mus musculus 50 Mthfs ENSMUSG00000066442 ENSMUST00000085256 1 1 1 240 9 89110087 89110105 CCATCTTTCTAAGCATGCA 57 89134680 89134698 AAGATGAGGTCAAGTCCAC 58 NA DesignNoJunction Mus musculus 50 Wdr35 ENSMUSG00000066643 ENSMUST00000085745,ENSMUST00000111113 1 2 2 80 12 8992855 8992873 CCAGAAGGTAGTCACTCAG 58 8992916 8994100 TTCAAAGTACCCAGATGCTC 59 NA Mus musculus 50 Asb18 ENSMUSG00000067081 ENSMUST00000086882,ENSMUST00000097656,ENSMUST00000113098 1 3 3 60 1 91911085 91911105 AGTGAGGAGATTAAAGTCTGC 59 91911045 91911063 GATCAGCTTCTGTACAGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Spnb3 ENSMUSG00000067889 ENSMUST00000008991 2 1 1 80 19 4726684 4729066 CCTGGATCCTGAAGATGTG 59 4729109 4729128 AAGTAGTGGTAGTAAGTGGC 58 NA Mus musculus 50 Krtap6-1 ENSMUSG00000068075 ENSMUST00000089106 2 1 1 67 16 89015772 89015790 GGTTCTGGCTATGGATCTG 59 89015819 89015839 ATTGGAGAAGATGAGAGTCTC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 4930525M21Rik ENSMUSG00000068173 ENSMUST00000089286 1 1 1 60 X 35367191 35367209 GAGGTAGCTCTCACAACAG 59 35367149 35367167 TCCTTAAAGCTGATTCTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tcl1b3 ENSMUSG00000068940 ENSMUST00000090991,ENSMUST00000090990 1 2 2 60 12 106431782 106432660 CTGGATCATTCCCAGATGG 59 106432682 106432702 CCTCGCATATTACTATGTCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 OTTMUSG00000002191 ENSMUSG00000069717 ENSMUST00000107434 1 1 2 149 11 99719775 99719793 CTTTCTGCCTCAATCTGTG 58 99719906 99719924 TTAATCAACAGCCACAGGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 ENSMUSG00000070900 ENSMUSG00000070900 ENSMUST00000094969 2 1 1 69 4 94223513 94223532 TTTACTACGCGTAGCTTCTG 59 94223564 94223582 AAACTCCAGACAACCTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm136 ENSMUSG00000071015 ENSMUST00000095129 1 1 1 93 4 34698232 34698250 GATCAAGCAGTTGAAGACG 58 34693895 34698178 TGTCTTCTAGAGCCTTTAAGTC 59 NA Mus musculus 50 D630040G17Rik ENSMUSG00000071064 ENSMUST00000098614,ENSMUST00000087927,ENSMUST00000095242 3 3 3 81 8 81585150 81585168 CCAGTTTCCAAGGGAAGAG 59 81594292 81594311 ATATTGGACATTGGAATGGC 58 NA DesignNoJunction Mus musculus 50 3830408C21Rik ENSMUSG00000071181 ENSMUST00000095459 2 1 1 60 13 107822580 107822599 TTTCTTTCCTGGTCTGTCAG 59 107822621 107822640 CTGTCATTCAGGACTCTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 V1rh9 ENSMUSG00000071493 ENSMUST00000095967 2 1 1 76 13 22864614 22864632 GAGATGCATTGTTTCAGGT 58 22864556 22864574 ATGATGGTGGTGCTTATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 D330050I16Rik ENSMUSG00000071688 ENSMUST00000093445 3 1 1 225 19 5388510 5388529 GCTTGTGTTTCTTATGCTCG 59 5388717 5388735 TCTTAGTTTCCGGCAACAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Gspt2 ENSMUSG00000071723 ENSMUST00000113891 2 1 2 97 X 91883631 91883649 GAGACTTCAGTCGTGTCAC 59 91883707 91884440 CCGTAAACCAAAGCTATTACTG 59 NA InUTR Mus musculus 50 2900055J20Rik ENSMUSG00000071860 ENSMUST00000096572 1 1 1 60 18 40416853 40416872 CTCTGAATGCCTCTAAGTCC 59 40416894 40416913 AGATAAATCCTTTGCACCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Fndc1 ENSMUSG00000071984 ENSMUST00000097425 1 1 1 80 17 7973093 7975251 GAGTTGTTGCATCAAGACAG 59 7973032 7973052 TAGAGACTTGCTTGTAATCCC 59 NA Mus musculus 50 EG667719 ENSMUSG00000072479 ENSMUST00000114518,ENSMUST00000097221 3 2 2 80 X 70398481 70399534 GGATTTCAAAGGTGATGATGG 59 70399574 70399594 CTGAAAGAGGCATTTACATCC 59 NA Nonspecific Mus musculus 50 Zadh1 ENSMUSG00000072946 ENSMUST00000101216,ENSMUST00000110290 2 2 2 84 12 85636210 85636228 GTTCAGTTTACCGGATGCT 59 85636276 85638969 CTTACAGCGCATGTAAGGA 59 NA Mus musculus 50 Rmcs2 ENSMUSG00000073421 ENSMUST00000114196 2 1 2 119 17 34404549 34404686 CACTGTGGAGTGGATACTG 59 34404960 34404978 CTTTCTGACTCCTGTGACG 59 NA Mus musculus 50 Mup1 ENSMUSG00000073834 ENSMUST00000098046,ENSMUST00000084544,ENSMUST00000107493 1 3 3 83 4 60673135 60673770 TTCTGTGACGTATGATGGA 57 60673070 60673088 TCGTTAATGAGATGAGCCA 58 NA Nonspecific Mus musculus 50 Iqck ENSMUSG00000073856 ENSMUST00000106547,ENSMUST00000106546 3 2 2 86 7 126021142 126021160 CATCTTTCCAGTTCTGCTC 58 126021209 126043160 AATTTGGTTCTCTTCCTCTC 57 NA Nonspecific Mus musculus 50 ENSMUSG00000074023 ENSMUSG00000074023 ENSMUST00000098304 3 1 1 62 7 100088751 100088769 ACAATCTACAGAACCCGAG 58 100088795 100088813 GAACACATTTCCATGGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 9330120H11Rik ENSMUSG00000074040 ENSMUST00000098326 2 1 1 60 7 88747315 88747334 ATGCCATACACATTCTTTCC 58 88747274 88747293 TAGATTGATCGATGCTTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074574 ENSMUSG00000074574 ENSMUST00000099065 1 1 1 61 2 168456382 168456400 GAAGGCGCTTTATAGACAC 58 168456339 168456357 GAAGACATGGATGCAAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074603 ENSMUSG00000074603 ENSMUST00000099104 3 1 1 60 3 51498465 51498483 TTTAACCATCGTGGCTCTG 59 51498507 51498525 TGAGATCCTGCCTATCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ifit3 ENSMUSG00000074896 ENSMUST00000102825 1 1 1 60 19 34662693 34662711 GTTTGTTGCAATTTCCCAG 57 34662733 34662753 GTTTGCTCTTTAACCTCTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1303 ENSMUSG00000074956 ENSMUST00000099609 3 1 1 60 2 111654552 111654573 TATCCATTTAGTTGGTGGAGTG 59 111654513 111654532 ATATCTGTCAAATGCCATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1270 ENSMUSG00000075065 ENSMUST00000099754 1 1 1 60 2 89989667 89989687 CTTATCTCTATTCAGTTGCCC 57 89989627 89989645 GGTCACAGAAGTAGTGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1104 ENSMUSG00000075166 ENSMUST00000099869 3 1 1 60 2 86861943 86861961 GTCACTGTCTTCTATGGCT 58 86861901 86861919 GGGATGATGTGTTATCAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1066 ENSMUSG00000075181 ENSMUST00000099885 3 1 1 61 2 86295718 86295736 ACTGAGGGTAAATGGAAGG 58 86295675 86295694 AAGACGATGACAACTGTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:3031351 ENSMUSG00000075204 ENSMUST00000099910 1 1 1 60 2 85970941 85970961 TCCGCTGATCTATAGTTTGAG 59 85970901 85970919 TTCAGTAAATCGCTTCAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000012844 ENSMUSG00000075325 ENSMUST00000100075 3 1 1 60 2 60806086 60806105 CTTGGTCTCTTCAAGGAGTC 59 60806045 60806063 AGAGCTTGAGAAGACTTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zc3h3 ENSMUSG00000075600 ENSMUST00000100538 1 1 1 110 15 75640034 75640052 CGCATTGTTAAGAAGACCC 58 75616052 75639960 GTTTAGCACTAGGGACCTG 59 NA Nonspecific Mus musculus 50 2300005B03Rik ENSMUSG00000075605 ENSMUST00000057932 1 1 1 87 15 74573866 74573884 GGATTTGGAGGATGCTCTC 59 74573546 74573815 TAAAGCTGATGGGAGAACG 59 NA DesignNoJunction Mus musculus 50 IGHV1S3 ENSMUSG00000076723 ENSMUST00000103532 1 1 1 60 12 116699318 116699338 GGTGGTACTAAGTACAATGAG 57 116699278 116699296 AGGGTTTGTCTACAGTCAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 IGHV1S53 ENSMUSG00000076737 ENSMUST00000103546 2 1 1 119 12 117107279 117107377 GTAACTACAGGTGTCCACTC 59 117107179 117107197 AGTATGGTCAGTGAAGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 A2BFQ5_MOUSE ENSMUSG00000078344 ENSMUST00000096504 1 1 1 60 X 10879860 10879878 GGTACAGAACAACGAACAG 58 10879902 10879920 CTCATTCACTGATGTGCCA 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A2A521_MOUSE ENSMUSG00000078581 ENSMUST00000106308 2 1 1 82 11 117985415 117985433 GGAATTCCCTTCATCCCTC 59 117983257 117985369 CCGTCTTGTAAAGGTCCTC 59 NA Mus musculus 50 Ccdc47 ENSMUSG00000078622 ENSMUST00000002043,ENSMUST00000106865 1 2 2 80 11 106063800 106064053 TTACATTTAATGTGCCTGGC 58 106063739 106063758 AAATCACCATGTTCATCAGG 58 NA Mus musculus 50 MGI:3650082 ENSMUSG00000078862 ENSMUST00000108932,ENSMUST00000108930,ENSMUST00000099000,ENSMUST00000108928 3 4 5 80 2 177683188 177683207 ATCCTTCTCAGAAGAGTCTC 57 177682921 177683148 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 Spdya ENSMUSG00000079356 ENSMUST00000024852 1 1 1 83 17 71885835 71885854 CAGAGTTATGTGAGATGGCA 59 71885897 71886566 TCTTACTACCTCCAATCAACTG 59 NA Mus musculus 50 Seh1l ENSMUSG00000079614 ENSMUST00000116622,ENSMUST00000025421 2 2 2 80 18 67949085 67949104 AGTTGGAACATAACAGGGAC 59 67949144 67951531 GTCCATGTAATTAGCTTTCCAC 59 NA Mus musculus 50 Ssxb6 ENSMUSG00000079702 ENSMUST00000101691 3 1 1 163 X 8125323 8125342 TGGAAGTGCTTTATGAACCA 59 8124426 8124743 GTTCACAGTGACACCTAGG 59 NA Mus musculus 50 Tcte3 ENSMUSG00000079707 ENSMUST00000097398 1 1 2 67 17 15164276 15170326 CCAGCAGATATTAAAGATTGCC 59 15164230 15164248 TAGCTTCTACCCAGTTGTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Eif4e1b ENSMUSG00000079904 ENSMUST00000116020 2 1 1 62 1 164558897 164558916 GACTTCTGGGTGATGTACAG 59 164558854 164558872 ATAGTCACAGCAGGAAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 4930546H06Rik ENSMUSG00000080316 ENSMUST00000052338 3 1 1 254 17 17975196 17975286 TTTATCTGAACGTGACGGG 59 17975962 17975980 AGTTGCCACTTAAGTACCA 58 NA DesignRelaxed Mus musculus 50 Oprm1 ENSMUSG00000000766 ENSMUST00000105614,ENSMUST00000105601,ENSMUST00000105611,ENSMUST00000052751,ENSMUST00000105609,ENSMUST00000105607,ENSMUST00000056385,ENSMUST00000092734,ENSMUST00000105605,ENSMUST00000092729,ENSMUST00000105604,ENSMUST00000092731,ENSMUST00000000783,ENSMUST0 1 18 21 60 10 3557435 3557454 CATGGCCCTCTATTCTATCG 59 3557394 3557414 ATACATGACCAGGAAGTTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ltbp1 ENSMUSG00000001870 ENSMUST00000001927,ENSMUST00000112516,ENSMUST00000112514 3 3 5 153 17 75626567 75648237 ACCATTGGATCACAGTGTG 59 75651699 75651719 GTAGGCATTCCATCATTTGAG 59 NA Mus musculus 50 Mll1 ENSMUSG00000002028 ENSMUST00000002095 3 1 3 176 9 44643914 44643932 CTCACGATTTCTCACTGTG 58 44641114 44641996 TCTCATACATCTCATCTGAGAG 58 NA Mus musculus 50 Axl ENSMUSG00000002602 ENSMUST00000108398,ENSMUST00000002677,ENSMUST00000085948 1 3 3 80 7 26551864 26551882 GCTGAAGGAGAAACTACGA 59 26551605 26551820 CCAAATTCTCCTTCTCCCA 58 NA Mus musculus 50 Relb ENSMUSG00000002983 ENSMUST00000094762,ENSMUST00000049912,ENSMUST00000098754 1 3 4 103 7 20199227 20200918 CTACGACAAGAAGTCCACC 59 20199142 20199160 TGTCACAGAGCAAGTACAG 59 NA Mus musculus 50 Dgcr2 ENSMUSG00000003166 ENSMUST00000100114,ENSMUST00000066127,ENSMUST00000012152 3 3 3 102 16 17844297 17845089 GATTGGAGCAAACTTGCAC 59 17844213 17844231 AGAAAGATGTAGTGGCGTG 59 NA Mus musculus 50 Dlgap1 ENSMUSG00000003279 ENSMUST00000003366,ENSMUST00000060072 1 2 3 101 17 70866324 70942512 CCAGTACTTACAGGTTCCC 58 70942577 70942595 TTGATGTAGCTACCACTGC 59 NA Mus musculus 50 Dlgap1 ENSMUSG00000003279 ENSMUST00000003366,ENSMUST00000060072 2 2 3 102 17 70866323 70942511 GCCAGTACTTACAGGTTCC 59 70942577 70942595 TTGATGTAGCTACCACTGC 59 NA Mus musculus 50 Stat3 ENSMUSG00000004040 ENSMUST00000103114,ENSMUST00000103113 1 2 3 105 11 100754423 100754441 TTGGAAAGTACTGTAGGCC 58 100750846 100751209 TCAATGAATGGTGTCACAC 57 NA Mus musculus 50 Cd44 ENSMUSG00000005087 ENSMUST00000111193 2 1 15 97 2 102664488 102677986 TCAAACAGAAAGCAAGGGA 59 102662435 102664427 TGAGCCATTCTGGAATCTG 59 NA Mus musculus 50 Plekha8 ENSMUSG00000005225 ENSMUST00000005357,ENSMUST00000101385 2 2 2 81 6 54574560 54574578 GAACTTCTGGAGGACAGTG 59 54574622 54578848 CAAGTTTGTCTAGGACTGGA 58 NA Mus musculus 50 Hmox1 ENSMUSG00000005413 ENSMUST00000098626 1 1 2 100 8 77620785 77620803 CTGGAAGAGGAGATAGAGC 58 77620867 77624273 ATATCAAAGTGCTCCAGGG 59 NA Mus musculus 50 Ergic3 ENSMUSG00000005881 ENSMUST00000006035 2 1 2 96 2 155837089 155837107 CTGGAAACTTCCACTTTGC 59 155841746 155842452 GTCATGTTGATATTGTCAAGGC 59 NA Mus musculus 50 Ubp1 ENSMUSG00000009741 ENSMUST00000116492 3 1 2 80 9 113867987 113868005 AGATGGAGAAGAGAACAGC 58 113868049 113873679 ATGGAGAACACTCTGTGAG 58 NA Nonspecific Mus musculus 50 1700021C14Rik ENSMUSG00000010538 ENSMUST00000107556,ENSMUST00000010682 2 2 2 93 3 88099318 88099339 ACACTAGTAACCCTACTAAGGA 59 88091073 88091092 GGAAGATCAATGTAACTGGG 57 NA DesignNoJunction Mus musculus 50 Zfp296 ENSMUSG00000011267 ENSMUST00000108453,ENSMUST00000011411 1 2 3 168 7 20162962 20163168 AGTTCTAAGTCTTCCGACC 58 20163300 20164970 CTTTGGATTCTGAGATGGG 57 NA Mus musculus 50 Spnb4 ENSMUSG00000011751 ENSMUST00000011895,ENSMUST00000108363,ENSMUST00000108364,ENSMUST00000108362 1 4 4 101 7 28142465 28144775 AGGCTAAAGATGAGGAGGA 59 28142382 28142400 TGGTAGGTAGTGTCTGACC 59 NA Mus musculus 50 Evi5 ENSMUSG00000011831 ENSMUST00000011975 3 1 3 85 5 108238745 108239316 TGATACAGGGACAAGTGAC 58 108238678 108238696 AGTCTGTTGTTTGATGGTG 57 NA Mus musculus 50 Nanog ENSMUSG00000012396 ENSMUST00000112581,ENSMUST00000112580,ENSMUST00000012540,ENSMUST00000112582 2 4 4 80 6 122661751 122661769 AGAAGCAGAAGTACCTCAG 58 122661811 122662656 AGGTCTTAACCTGCTTATAGC 59 NA Mus musculus 50 Phox2b ENSMUSG00000012520 ENSMUST00000012664 1 1 1 141 5 67488931 67488949 CACTGAAGATCGACCTCAC 59 67487755 67487773 GAGGAGTCAGACTTCTTCC 58 NA DesignNoJunction Mus musculus 50 Elmo3 ENSMUSG00000014791 ENSMUST00000109375 1 1 2 99 8 107830080 107830288 CAGAGAATAACCGCTTGGA 59 107830517 107830536 GTATTCTGCAGTCTACCCAG 59 NA Mus musculus 50 Lrrk1 ENSMUSG00000015133 ENSMUST00000089025,ENSMUST00000015277 2 2 3 142 7 73417972 73419672 GAATGCCAAAGATTCTTCCT 58 73417849 73417867 ACCACACTAGGATGTTGTC 58 NA Mus musculus 50 Kcnq2 ENSMUSG00000016346 ENSMUST00000049792,ENSMUST00000103048,ENSMUST00000103051,ENSMUST00000103050,ENSMUST00000103049 1 5 10 80 2 180821720 180821738 GTCATCGAACAGTACTCGG 59 180817146 180821676 CACAATCTGGTCCACTCTG 59 NA Mus musculus 50 Nbr1 ENSMUSG00000017119 ENSMUST00000103099,ENSMUST00000103098,ENSMUST00000107208,ENSMUST00000107212,ENSMUST00000071537,ENSMUST00000107219,ENSMUST00000093932,ENSMUST00000107203 3 8 11 82 11 101433816 101433835 TTTAATAGAGAAGCCAGGCT 58 101433880 101434133 ATACAGTGGAATCAGGAGG 58 NA Mus musculus 50 Eya2 ENSMUSG00000017897 ENSMUST00000063422,ENSMUST00000103082,ENSMUST00000063433 1 3 4 154 2 165557087 165557105 TTATCTTCCACTCCCTGCT 59 165580027 165587418 GATTTGGTCACAGTCCTCC 59 NA Mus musculus 50 Phf23 ENSMUSG00000018572 ENSMUST00000018716 2 1 2 115 11 69811330 69811810 CTAGCAAAGAGGAAAGCGA 59 69811889 69811907 CTGGATAGTTCGAAGGTCC 59 NA Mus musculus 50 Pnpo ENSMUSG00000018659 ENSMUST00000107630,ENSMUST00000107629 2 2 3 98 11 96803795 96803813 CATGAAGCAGTTTGCTTCC 59 96801375 96803733 ATTAGAATCCTGGTGCAGG 59 NA Mus musculus 50 Rwdd1 ENSMUSG00000019782 ENSMUST00000019917 3 1 2 199 10 33728823 33728844 AGAAGACAATGATGTCTCAGAC 59 33721587 33722239 GGAACAGTTTCTTCTCTGCT 59 NA Mus musculus 50 Atp2b1 ENSMUSG00000019943 ENSMUST00000020107,ENSMUST00000105284 1 2 2 80 10 98449986 98453701 CCTTACTTCTTTCAGGTACTC 57 98453742 98453761 CTGTTTGAGAATTCACACCT 58 NA Mus musculus 50 Usp15 ENSMUSG00000020124 ENSMUST00000105259 1 1 3 92 10 122583991 122600663 TCCCTCTACTCCTAATGTG 57 122583917 122583935 TTGTTTCTTCCAGGTTCTG 57 NA Mus musculus 50 Acsl6 ENSMUSG00000020333 ENSMUST00000108902,ENSMUST00000108904,ENSMUST00000101211,ENSMUST00000101213,ENSMUST00000108899 3 5 12 185 11 54143454 54143473 TTTCACAAGTGGTACAACAG 58 54150646 54151927 CAGTAGACAACAGACTGCA 59 NA Mus musculus 50 Clk4 ENSMUSG00000020385 ENSMUST00000093132 1 1 6 80 11 51080816 51085305 GTTTAAAGACTCGGATTGTCAC 59 51085345 51085364 TCATCAATGTATCTCCGGTC 58 NA Mus musculus 50 Tubd1 ENSMUSG00000020513 ENSMUST00000020821,ENSMUST00000108030 1 2 3 91 11 86368794 86370204 AGAAATCCACTAGACTCTGGA 59 86370257 86370275 AAAGATAGGTTGGTGGCAG 59 NA Mus musculus 50 Rgs9 ENSMUSG00000020599 ENSMUST00000020920,ENSMUST00000106706,ENSMUST00000106704 3 3 4 80 11 109137186 109137205 GGCTACATCTATCCTTTGCA 59 109136936 109137143 ATATGGCGTCTGAAATCGG 59 NA Mus musculus 50 Ern1 ENSMUSG00000020715 ENSMUST00000001059,ENSMUST00000106801,ENSMUST00000106800 1 3 4 110 11 106320251 106320269 ATGCTGTTAGCAAGAGGAC 59 106296273 106296291 CATCATTGGGATCTGGGAG 59 NA DesignNoJunction Mus musculus 50 Mif4gd ENSMUSG00000020743 ENSMUST00000106507,ENSMUST00000021087 2 2 3 62 11 115470594 115470614 AACATCTTTGACTACCTGAGG 59 115470426 115470444 ATAGACAGGGTTAACCAGG 57 NA DesignNoJunction Mus musculus 50 Mif4gd ENSMUSG00000020743 ENSMUST00000106507,ENSMUST00000021087,ENSMUST00000106506 1 3 3 115 11 115470878 115470896 TATTCAGCAAGGAAGCAGG 59 115470678 115470696 ATCATACTCCTTCTGCAGC 59 NA DesignNoJunction Mus musculus 50 Mink1 ENSMUSG00000020827 ENSMUST00000072237,ENSMUST00000072873,ENSMUST00000102559,ENSMUST00000102558 2 4 5 148 11 70417307 70417325 ATCAAGACTTACCTGAGCC 58 70417437 70417695 TCTGTCTCCTCTTTCTCAC 57 NA Mus musculus 50 Ppp2r5e ENSMUSG00000021051 ENSMUST00000021447 1 1 2 81 12 76594451 76594471 CTAGTGACAGCAATGAATTCG 59 76586201 76594411 TCATATACAAGCTGTAAGTGGG 59 NA Mus musculus 50 Esr2 ENSMUSG00000021055 ENSMUST00000110420 2 1 6 85 12 77224305 77242332 GTTCTGGACAGTATGTACCC 59 77224239 77224257 GTCACTGCGTTCAATAGGT 59 NA Mus musculus 50 Esrrb ENSMUSG00000021255 ENSMUST00000021680,ENSMUST00000110204,ENSMUST00000116402,ENSMUST00000110207 1 4 4 80 12 87855437 87855458 AAGAAACTCAAGGTAGAGAAGG 59 87855496 87859787 CTCAATGTACATCGAATCTGAG 58 NA Mus musculus 50 Gcnt2 ENSMUSG00000021360 ENSMUST00000069958 3 1 3 140 13 40983635 40983653 GACGCTCAATAGGATTCCA 59 41053527 41053545 ATACAAATGCCATGGACGT 59 NA DesignNoJunction Mus musculus 50 Ddx46 ENSMUSG00000021500 ENSMUST00000099479 1 1 2 186 13 55760516 55764586 TTTGTTGAAGCAGATCTGC 58 55764736 55765149 CAATCACAATCACCTGCTG 59 NA Mus musculus 50 Slc4a7 ENSMUSG00000021733 ENSMUST00000090583 1 1 3 95 14 15607485 15607506 AGCTCTCCTTTGTACTATTCTC 59 15607561 15611353 GGCATTGGGATAAACTTGAG 58 NA Mus musculus 50 Dlg5 ENSMUSG00000021782 ENSMUST00000090398,ENSMUST00000073687,ENSMUST00000042009 1 3 3 81 14 24957882 24957900 ACCTTTACTGGATGTGGTG 59 24957576 24957837 CTTCATCACCTCAAGTGGG 59 NA Mus musculus 50 Zc3h13 ENSMUSG00000022000 ENSMUST00000022577,ENSMUST00000100381 3 2 2 114 14 75727846 75727865 GGGAAGATAAAGACAAGGGA 58 75727942 75729489 TAGCGTTTCTTGGACTTCC 59 NA Mus musculus 50 Pdzd2 ENSMUSG00000022197 ENSMUST00000075317,ENSMUST00000096893 2 2 3 103 15 12337127 12340773 GGACATCACAGGAATACCA 58 12337042 12337060 GATGGAAATAACGGATGGC 58 NA Mus musculus 50 Kif21a ENSMUSG00000022629 ENSMUST00000109287 2 1 6 80 15 90786776 90786794 AAGTGGTACTTCTGCTAGG 58 90774321 90786732 TTGATTATGCCTATGCTGC 57 NA Mus musculus 50 Osbpl11 ENSMUSG00000022807 ENSMUST00000115064,ENSMUST00000039733 3 2 2 82 16 33227371 33227390 TGTAAATGCACATGTCTGGA 59 33227435 33229059 GACAAAGGACACCTTCTCC 59 NA Mus musculus 50 Stxbp5l ENSMUSG00000022829 ENSMUST00000114787,ENSMUST00000096074 2 2 10 112 16 37174437 37186745 CCTATCAGAGCTTAACAGAGC 59 37142495 37142513 CTGAGAGGTTGGACTTGTG 59 NA Mus musculus 50 Ece2 ENSMUSG00000022842 ENSMUST00000051465 3 1 4 167 16 20617830 20617848 GAGACCATGGATGTTCGAG 59 20617978 20630439 TTTGTACTCCACCATCTCAC 59 NA Mus musculus 50 Atp5j ENSMUSG00000022890 ENSMUST00000114193,ENSMUST00000114191,ENSMUST00000023608 1 3 3 62 16 84831593 84831612 CTTCGTGGACAAGATAAGAG 57 84828771 84828789 ATATCAACAGGTCCTCCAG 58 NA DesignNoJunction Mus musculus 50 Lmbr1l ENSMUSG00000022999 ENSMUST00000023736 2 1 2 103 15 98745638 98748287 GTGCATCATCTCAATACTTCTG 59 98744010 98745574 CTTCATCATCCACTGTGGT 59 NA Mus musculus 50 Pde10a ENSMUSG00000023868 ENSMUST00000115715,ENSMUST00000115724,ENSMUST00000089085,ENSMUST00000115720,ENSMUST00000024647,ENSMUST00000115718,ENSMUST00000115717 2 7 7 132 17 9123411 9134011 GAGAGTGCAATAATAGCCTG 58 9134106 9134124 AACGTCTTCCTAGACTTGG 58 NA Mus musculus 50 Cpne5 ENSMUSG00000024008 ENSMUST00000024805 1 1 2 98 17 29296179 29296908 GACATTGTCCAGTTTGTGC 59 29296099 29296117 AATCTCAGCCAGAACATCC 59 NA Mus musculus 50 1110021J02Rik ENSMUSG00000024018 ENSMUST00000024815 3 1 2 89 17 29841372 29841390 ATGAGAACCGGAAGAACAC 59 29837184 29841320 AGGAGGTGTATCGGATAGTC 59 NA Mus musculus 50 Yipf4 ENSMUSG00000024072 ENSMUST00000024873,ENSMUST00000024874 1 2 2 83 17 74893429 74895937 GACAGTTTAGGGTGGTCTC 59 74895984 74896002 CACCAAGAACTCTAGCCAG 59 NA Mus musculus 50 Spsb3 ENSMUSG00000024160 ENSMUST00000068508,ENSMUST00000024976 2 2 2 156 17 25027686 25027781 TATGGCACAGACATGATGG 59 25027976 25027994 AAGAGAAGCTCGTCTTGTC 59 NA Mus musculus 50 Thada ENSMUSG00000024251 ENSMUST00000047524 3 1 2 80 17 84628527 84628545 GAAATCCAGGGAGTAGCTC 59 84625370 84628484 TGAATCTTTGTTCTTCTCGC 58 NA Mus musculus 50 Dync2li1 ENSMUSG00000024253 ENSMUST00000025101,ENSMUST00000112328 1 2 2 81 17 85044067 85044085 TCCTGAGAAGAGAAAGGTG 58 85044130 85046596 CTTGCTGGTAAACATCAGC 59 NA Mus musculus 50 Dsc2 ENSMUSG00000024331 ENSMUST00000075214 2 1 2 82 18 20190896 20191573 GACTTGGTGATAAGGTACAG 57 20190833 20190853 CTCATAGTTGTATGTGAGGAC 57 NA Mus musculus 50 Cabyr ENSMUSG00000024430 ENSMUST00000080415,ENSMUST00000115857 1 2 2 80 18 12903107 12903126 ACCAATCCAACAAACATCAC 58 12903168 12903278 TAGAGACGAATTCCCTTCTC 58 NA Mus musculus 50 Cd74 ENSMUSG00000024610 ENSMUST00000050487 1 1 2 103 18 60963655 60967567 AGCCAGAAAGTAAGTGCAG 59 60967633 60967652 CTGGTACAGGAAGTAAGCAG 59 NA Mus musculus 50 Men1 ENSMUSG00000024947 ENSMUST00000113504,ENSMUST00000056391,ENSMUST00000113502,ENSMUST00000079327,ENSMUST00000113503,ENSMUST00000113500,ENSMUST00000078137 3 7 7 96 19 6337506 6337606 GGACATCTGGAAAGATACCC 59 6337665 6337683 GATAAAGGGTGAGTGGGTC 59 NA Nonspecific Mus musculus 50 Pde6c ENSMUSG00000024992 ENSMUST00000112329 1 1 2 113 19 38252605 38252623 AAATACGTAACCTCCGACC 59 38252802 38254669 CATCATAGGCTGACTCTGC 59 NA Mus musculus 50 Aspscr1 ENSMUSG00000025142 ENSMUST00000026135,ENSMUST00000106159,ENSMUST00000103016,ENSMUST00000106160 1 4 5 106 11 120564972 120565396 TTACCTATTCATCGCTCCA 57 120569999 120570017 GTTCTTCAGCTCCAAAGTG 58 NA Mus musculus 50 Inpp5a ENSMUSG00000025477 ENSMUST00000106098,ENSMUST00000026550,ENSMUST00000097975 1 3 3 81 7 146702566 146702584 ATTCGGACACTTTGGAGAG 59 146702629 146709749 CTTGACCATTTGCACTCAG 59 NA Mus musculus 50 Pnpla2 ENSMUSG00000025509 ENSMUST00000026583,ENSMUST00000064151 1 2 2 60 7 148643369 148643387 ATATCCCACTTTAGCTCCA 57 148643497 148643515 GGATAAATGTGCTGCAGAC 58 NA DesignNoJunction Mus musculus 50 MGI:1918324 ENSMUSG00000025762 ENSMUST00000026862 1 1 3 94 3 40838004 40840624 AATTACAGGCCAGCTATATGG 59 40840680 40840698 ATTCCTGAAGTTTCGGGTC 59 NA Mus musculus 50 Stag2 ENSMUSG00000025862 ENSMUST00000115072,ENSMUST00000069619 1 2 3 88 X 39619444 39622567 GGATTATAATCGGCGTGGT 59 39622618 39622637 CAATCCTTCCTTCTGAGGAC 59 NA Mus musculus 50 Pik3c2b ENSMUSG00000026447 ENSMUST00000077730,ENSMUST00000112310 1 2 2 99 1 134976328 134976346 GATTTGGTTCAAGAGGCCT 59 134976408 134977548 AATCTTCATAGCTGGTAGCC 59 NA Mus musculus 50 Mpzl1 ENSMUSG00000026566 ENSMUST00000111435,ENSMUST00000068705 3 2 2 131 1 167534866 167535751 TGGTGGAAATAGACAACCTG 59 167534754 167534773 GCTTCGAATGTTTCCTTCTG 59 NA Mus musculus 50 Hsd17b7 ENSMUSG00000026675 ENSMUST00000027989,ENSMUST00000111353 3 2 2 88 1 171891318 171894529 TTATTCTGATTCGGGAACTGG 59 171891250 171891268 CTTCTTTGCATTGCGAGAG 59 NA Mus musculus 50 Kynu ENSMUSG00000026866 ENSMUST00000028223,ENSMUST00000112826 1 2 4 97 2 43528268 43535282 AGTTTAGAGGTCTTTCAGCA 58 43535342 43535360 CTGTGGTAATGTTTGAGCA 57 NA Mus musculus 50 Gapvd1 ENSMUSG00000026867 ENSMUST00000102800,ENSMUST00000028224,ENSMUST00000113103,ENSMUST00000113099 1 4 7 80 2 34576242 34580577 ATCGATTACCTATAGCAACTCG 59 34576183 34576203 GAGATGATCCTTCATGATCCA 59 NA Mus musculus 50 Sec16a ENSMUSG00000026924 ENSMUST00000114082,ENSMUST00000091252,ENSMUST00000114078 3 3 4 81 2 26293960 26293979 GTATGATGCCTACCAGTCTC 59 26291560 26293919 ATACATATCCTGGTAGTACAGC 58 NA Mus musculus 50 Gpsm1 ENSMUSG00000026930 ENSMUST00000066936,ENSMUST00000078616,ENSMUST00000066889 3 3 6 107 2 26180423 26180866 GAACATTACAAGAAGACGCTG 59 26180935 26180953 GTAGTCCTGTAGCAGTGTG 59 NA Mus musculus 50 Lcn12 ENSMUSG00000026943 ENSMUST00000028312,ENSMUST00000114245 3 2 2 81 2 25347581 25347600 ATAGACAAGTTCATCTGCCT 58 25346464 25347539 GTAACCAGTCACTCAAATCAG 58 NA Mus musculus 50 2010317E24Rik ENSMUSG00000026955 ENSMUST00000114293,ENSMUST00000100323 1 2 3 230 2 25228416 25228434 AACCCTGAGCTGTTATGTG 59 25230581 25231219 CTTCATCTGCTTCAACAGG 58 NA DesignRelaxed Mus musculus 50 Itgb6 ENSMUSG00000026971 ENSMUST00000059888,ENSMUST00000028348,ENSMUST00000112517 2 3 4 80 2 60466438 60466457 CTCTGTAACAATGGTGTCCT 59 60466208 60466395 CACATTGAAGGATGCTGTG 59 NA Mus musculus 50 Slc28a2 ENSMUSG00000027219 ENSMUST00000110525,ENSMUST00000028652,ENSMUST00000110524,ENSMUST00000110526 1 4 4 103 2 122272709 122273516 GTGTTTAGCTTATGCTGCC 59 122273583 122273601 AAGCCAGGATGAAGATCAC 59 NA Mus musculus 50 Mfap1b ENSMUSG00000027242 ENSMUST00000110602,ENSMUST00000028676,ENSMUST00000110603 1 3 4 97 2 121357169 121359853 TTTGAGGAGGTGTACAGGA 59 121359914 121359932 AAATGTCCATCCCAGTGTC 59 NA Mus musculus 50 1700037H04Rik ENSMUSG00000027327 ENSMUST00000103188,ENSMUST00000028800 2 2 3 116 2 130973980 130973998 GATTACCTTCACTCTGCCT 58 130973010 130973900 ATGCTGTAACCTTCAGAGG 58 NA Mus musculus 50 Necab3 ENSMUSG00000027489 ENSMUST00000000895,ENSMUST00000109716 3 2 3 94 2 154381379 154381398 AGAATTACTTTGCTGATGGG 57 154380646 154381325 CTCTGTCTCTAAATTGTCAGTG 58 NA Mus musculus 50 Nkain4 ENSMUSG00000027574 ENSMUST00000108873,ENSMUST00000103053,ENSMUST00000029091 2 3 5 125 2 180678877 180678895 TTTGACTTCCTGGGTTACC 59 180678515 180678789 CCATACAACATACACCACGA 59 NA Mus musculus 50 Trpc4 ENSMUSG00000027748 ENSMUST00000108005,ENSMUST00000029311 2 2 2 83 3 54103172 54106025 TACCAACTAATTGCCGACC 59 54106071 54106090 ACCTCCTTCTTCAAAGTAGC 59 NA Mus musculus 50 Stxbp3a ENSMUSG00000027882 ENSMUST00000102621,ENSMUST00000029481 3 2 4 80 3 108608202 108608220 GTTCTTGAAGAAGACGACG 58 108608018 108608158 AAGCTTTGGAATTTCCTCC 57 NA Mus musculus 50 Hax1 ENSMUSG00000027944 ENSMUST00000094296 2 1 2 60 3 89800217 89801739 TGGCTTTGATGATCTATTGG 57 89800176 89800194 CTCTTTGGCTCTAGAATGG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Hsdl2 ENSMUSG00000028383 ENSMUST00000107529 1 1 3 178 4 59604960 59605039 GAATATGAAGCTAGCGGGA 58 59605180 59606117 CTGCTTCAATTTCTTCAGCA 59 NA Mus musculus 50 Itgb3bp ENSMUSG00000028549 ENSMUST00000102786,ENSMUST00000097960 1 2 2 197 4 99448652 99456300 AGTATACAGGCTTTGGAGG 58 99436198 99436217 GGCTTTAAGGAATTCAAAGC 57 NA Nonspecific Mus musculus 50 Cyp2j13 ENSMUSG00000028571 ENSMUST00000030305,ENSMUST00000097973,ENSMUST00000097972 3 3 4 186 4 95725812 95728603 ATGAAATGGCAAAGTACCC 57 95723621 95723639 ATCACTCGGTCAATTTCAG 57 NA Mus musculus 50 Macf1 ENSMUSG00000028649 ENSMUST00000097898 2 1 12 125 4 123122165 123122184 TGACTGGGAAAGTAAAGGAG 58 123118016 123122080 CACTGAATCTCTGTAAGATCTG 58 NA Mus musculus 50 AU040320 ENSMUSG00000028830 ENSMUST00000102608,ENSMUST00000047431,ENSMUST00000102607 2 3 3 80 4 126509396 126509416 GAAGAGAAGATCTCTGAAGAC 57 126509458 126512724 AACAGTTAAGCTGAAGGTG 57 NA Mus musculus 50 Nol9 ENSMUSG00000028948 ENSMUST00000084116,ENSMUST00000103197 2 2 3 121 4 151430323 151431906 GTTTGGGCTTTGGTATCTG 58 151431991 151432009 GATGGAAATGGAACCAACC 58 NA Mus musculus 50 Clcn6 ENSMUSG00000029016 ENSMUST00000105711,ENSMUST00000030879 3 2 3 81 4 147391656 147391677 CATTCAACTGTCTGAACAAGAG 59 147391079 147391614 TCTAAGACTCTGACGAGCT 59 NA Mus musculus 50 Cdc2l1 ENSMUSG00000029062 ENSMUST00000067081,ENSMUST00000105600,ENSMUST00000105598,ENSMUST00000105599 3 4 4 80 4 155023259 155023539 CTCATGAACAAGTTCCTGAC 58 155023582 155023600 CTCTCGGAAATATTCGTGC 58 NA Mus musculus 50 Apbb2 ENSMUSG00000029207 ENSMUST00000113715,ENSMUST00000087256 2 2 3 90 5 66783087 66791323 GAGAATGAGGATTTGCACG 58 66783015 66783033 GTTTCAAGGATGCATAGCG 59 NA Mus musculus 50 Hyal5 ENSMUSG00000029678 ENSMUST00000031689 2 1 1 110 6 24827906 24827924 TCTGGAATGGTAATGTGGG 58 24841277 24841298 GGTGACGTTGATGATATAAGGA 59 NA DesignNoJunction Mus musculus 50 Ephb4 ENSMUSG00000029710 ENSMUST00000111055,ENSMUST00000061244,ENSMUST00000111054 3 3 3 83 5 137812019 137812037 CTATGGGATCGTCATGTGG 59 137812084 137813265 ATGGCATTGATCACATCCT 59 NA Mus musculus 50 Copg ENSMUSG00000030058 ENSMUST00000049966,ENSMUST00000113607 2 2 2 73 6 87839701 87839722 CCTCACCAAGATCCTTTATCTC 59 87839974 87839992 CAAAGAAAGCCTCAGTTGC 59 NA DesignNoJunction Mus musculus 50 Tmtc1 ENSMUSG00000030306 ENSMUST00000060095 1 1 2 148 6 148243158 148243176 GGACTGAGTAAGCTCTGTG 59 148233484 148243047 ACTCCAGACCTGAATAAGGA 59 NA Mus musculus 50 Strn4 ENSMUSG00000030374 ENSMUST00000108495 1 1 2 107 7 17416389 17416407 AACTCCAGGGAATTCTTGC 59 17416478 17416843 TGAAGACGTCTTCATGAGG 59 NA Mus musculus 50 Acsm3 ENSMUSG00000030935 ENSMUST00000098081,ENSMUST00000106527,ENSMUST00000106528,ENSMUST00000063770,ENSMUST00000106529,ENSMUST00000106526 2 6 6 80 7 126924515 126924534 CCTCATAGAACATCCTTCCA 58 126924576 126927377 AAAGCCTTTACTACCTCTCC 58 NA Mus musculus 50 St5 ENSMUSG00000031024 ENSMUST00000079282,ENSMUST00000077909,ENSMUST00000084738 3 3 3 82 7 116668822 116668843 GAACAGTATCTAGAAGAGCTCC 59 116668179 116668779 AACTTCATCTTGTTGCCCA 59 NA Mus musculus 50 Cul4b ENSMUSG00000031095 ENSMUST00000016681 2 1 3 81 X 35897977 35897995 AAACGCCTATTAGTTGGCA 59 35895323 35897935 GGTTCTGCATATAGTGTTTCAG 59 NA Mus musculus 50 Uchl5ip ENSMUSG00000031371 ENSMUST00000033737 3 1 2 104 X 70694238 70698352 CAGGATCTTCTAATGGGCC 59 70694152 70694170 AGAACTACTGGAGCATCCA 59 NA Mus musculus 50 Bmx ENSMUSG00000031377 ENSMUST00000112265,ENSMUST00000015547,ENSMUST00000112263 1 3 3 80 X 160641183 160643115 CATACATCGAGATTTGGCTG 58 160641122 160641140 CTCGTCATTCCAAAGTCTG 58 NA Mus musculus 50 Prosc ENSMUSG00000031485 ENSMUST00000033875 2 1 2 171 8 28155898 28156408 ACCCTAAGATTCTGTCTTCCT 59 28159715 28159733 GTAGGACCTTTCTTCTGCC 59 NA Mus musculus 50 Cnot7 ENSMUSG00000031601 ENSMUST00000110472,ENSMUST00000034012,ENSMUST00000110471,ENSMUST00000110474 1 4 4 80 8 41586149 41586170 GCAGAACTTCTTATGACTTCAG 59 41584778 41586108 GCCAAAGTCATAACCACTG 58 NA Mus musculus 50 Mthfsd ENSMUSG00000031816 ENSMUST00000116415,ENSMUST00000116414 2 2 3 231 8 123621819 123622620 GATATGTGACCTGGACTCAG 59 123621607 123621625 AGATAAGAAGGCAAGGGTG 58 NA DesignRelaxed, InUTR Mus musculus 50 Irak1bp1 ENSMUSG00000032251 ENSMUST00000113245,ENSMUST00000034783 1 2 2 94 9 82739974 82739992 TAGCTCTGTTGTCATCAGC 59 82740147 82740165 CATTCTCAACAGCAACCAG 59 NA DesignNoJunction Mus musculus 50 Lca5 ENSMUSG00000032258 ENSMUST00000034793,ENSMUST00000113217 2 2 3 98 9 83292190 83292208 TGCTAAGTTCAGTGTTGGG 59 83285472 83292129 AAAGATTACCACTCTCAGGC 59 NA Mus musculus 50 Lactb ENSMUSG00000032370 ENSMUST00000034929,ENSMUST00000116554 2 2 2 177 9 66819167 66822537 GTCTGGTCAGAAGGTTTAGG 59 66819009 66819027 GGAACTCGGGAACATAGTG 59 NA Mus musculus 50 Pon2 ENSMUSG00000032667 ENSMUST00000057792,ENSMUST00000047700 1 2 2 118 6 5227918 5239021 AAGGAATCGAAACTGGAGC 59 5223113 5223131 TATCCCTCCAGGCTTATCC 59 NA Mus musculus 50 Gtf3c1 ENSMUSG00000032777 ENSMUST00000106423 2 1 2 151 7 132790242 132791924 CAGTCATACTACAACTTGGG 57 132790110 132790129 TAGTAACCTCTCATCAGCAG 58 NA Mus musculus 50 Slc10a3 ENSMUSG00000032806 ENSMUST00000114146,ENSMUST00000037967 3 2 4 64 X 71617972 71617990 TCATCAGCGAGATTCAAGG 59 71616324 71616343 TTTCTTCCTTGATAGCAGGA 58 NA DesignNoJunction, InUTR Mus musculus 50 Guca2b ENSMUSG00000032978 ENSMUST00000044426,ENSMUST00000106309 3 2 2 165 4 119330247 119330265 AGAAGGAGATGTCCAATCC 58 119329422 119329441 ATACACAGTTCACATTCGTC 57 NA DesignNoJunction Mus musculus 50 Ptprf ENSMUSG00000033295 ENSMUST00000049074,ENSMUST00000106394 1 2 2 80 4 117897330 117897348 CGCCTTTATAGAGGATGGC 59 117897183 117897287 ACAATGTAGAACCACCTGAC 59 NA Mus musculus 50 Tnxb ENSMUSG00000033327 ENSMUST00000055067,ENSMUST00000087399 1 2 2 80 17 34847273 34847293 AAGATGAACCTGTATGGACTC 59 34847335 34847662 CAGAGCTTCCTTCTCAGTC 59 NA Mus musculus 50 Acbd6 ENSMUSG00000033701 ENSMUST00000035560 3 1 3 86 1 157448656 157463006 GAAACAATCAGGGAAGAAGAC 58 157463053 157463072 TTTCGATTTGATGGCTTTGG 59 NA Mus musculus 50 Rpap2 ENSMUSG00000033773 ENSMUST00000112650,ENSMUST00000112654,ENSMUST00000065422,ENSMUST00000112653,ENSMUST00000112655 1 5 6 129 5 108030848 108032546 AATTCCTGAAGGAGTGTGG 59 108032639 108032853 TTCTGTTTCGGGATAACCC 59 NA Mus musculus 50 Mga ENSMUSG00000033943 ENSMUST00000110774,ENSMUST00000110773,ENSMUST00000046717 1 3 4 81 2 119757604 119757622 TACGAAGGGCAAACTAACC 59 119757666 119758254 GTCCTCTTCTCGTATCACAG 59 NA Mus musculus 50 Zfp446 ENSMUSG00000033961 ENSMUST00000045810,ENSMUST00000108535,ENSMUST00000108536 3 3 5 80 7 13564926 13564945 GGGATAGATCGATCTACCCA 59 13564987 13565244 ACTTGGAGATACCATCTCCT 59 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111696,ENSMUST00000111695,ENSMUST00000111694,ENSMUST00000111678,ENSMUST00000111677,ENSMUST00000111676,ENSMUST00000111687,ENSMUST00000111685,ENSMUST00000111684,ENSMUST00000111672 2 10 23 71 2 84443385 84443403 AAGAGTTGGATGTGTTGGT 59 84443048 84443350 GCTAAATCTTCTGCATGGG 58 NA DesignRelaxed Mus musculus 50 Grip1 ENSMUSG00000034813 ENSMUST00000077871,ENSMUST00000041962,ENSMUST00000105262 2 3 5 92 10 119368369 119368387 CGATGAGATCATCAGCCTG 59 119368442 119375315 CTGGATCCTTGTACAGAGAC 59 NA Mus musculus 50 Sec31a ENSMUSG00000035325 ENSMUST00000094578,ENSMUST00000112922,ENSMUST00000112918 2 3 4 82 5 100808009 100810186 CCAACCAGCCAAATATTGTG 59 100807946 100807964 CTGAGAAGATTCCTGTCCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ankrd11 ENSMUSG00000035569 ENSMUST00000098334 1 1 2 107 8 125423703 125423892 TGCAAATAGTCCGGTAGAC 59 125423614 125423635 CTCTTGTTCACCTTATCTTTGG 58 NA Mus musculus 50 Cd200r3 ENSMUSG00000036172 ENSMUST00000114612,ENSMUST00000114613 2 2 6 82 16 44957882 44957900 GTGAAACTGGCTGTAACTG 58 44957944 44964776 GTTGGTTCCTCATTTGATCTG 59 NA Mus musculus 50 2610024G14Rik ENSMUSG00000036285 ENSMUST00000047860,ENSMUST00000065065 1 2 2 80 5 77733261 77733279 AGAACCTTTGTCCTCAAGC 59 77728788 77733218 TGACTGATTTCCCTGTAGGA 59 NA Mus musculus 50 C330002I19Rik ENSMUSG00000036333 ENSMUST00000085537 2 1 4 92 12 25723403 25735965 TTTCTACAACAGGGCATCC 59 25736019 25736039 ATCTGTCTCAGTTTCTCACAC 59 NA Mus musculus 50 Hspb6 ENSMUSG00000036854 ENSMUST00000098573,ENSMUST00000044048 2 2 2 90 7 31339341 31339359 GAAATCTCTGTCAAGGTGG 57 31339497 31339515 ACTCTCGAGCAATGAATCC 59 NA DesignNoJunction Mus musculus 50 Anapc10 ENSMUSG00000036977 ENSMUST00000048147 1 1 1 90 8 82243622 82243640 CCTCACTTAGTGAACATCC 57 82253074 82253093 GAGTGTAGCTTTCATCAGAC 57 NA DesignNoJunction Mus musculus 50 Trim3 ENSMUSG00000036989 ENSMUST00000106789,ENSMUST00000057525 3 2 4 129 7 112759943 112759961 TCCTCTTCAAATTTGGCTC 57 112759714 112759850 CTGTCGAATACCTGTATGC 57 NA Mus musculus 50 Paip2 ENSMUSG00000037058 ENSMUST00000115737,ENSMUST00000115736,ENSMUST00000041314,ENSMUST00000115735,ENSMUST00000115734 3 5 5 87 18 35773085 35773105 ACTATGGACCAAATCCAAGAC 59 35773154 35775868 TCAGATTGCTCTTGACCAC 59 NA Mus musculus 50 Rab11fip3 ENSMUSG00000037098 ENSMUST00000075024,ENSMUST00000069854 1 2 2 107 17 26128055 26128214 AGACTCAAACAGGACAACC 59 26127966 26127984 GAAAGACGTGGAGAAGAGG 59 NA Mus musculus 50 Inf2 ENSMUSG00000037679 ENSMUST00000101029 1 1 2 114 12 113850143 113850161 CAGTGACAGATTCCTCAGG 59 113850239 113850768 GGGACAAACTCTTCTTGGT 59 NA Mus musculus 50 Parp11 ENSMUSG00000037997 ENSMUST00000112195,ENSMUST00000112193,ENSMUST00000039680 2 3 4 108 6 127421588 127421609 CAGTTAGCAGTGAAGATATCGA 59 127421677 127424263 TGCTTCATTTCTGCAAAGTC 59 NA Mus musculus 50 Armc10 ENSMUSG00000038525 ENSMUST00000073956 1 1 2 85 5 21151983 21152001 CTACTGTATCTACCGGCTG 58 21152050 21154494 GTTTCTTAAGCTGCTCTGC 59 NA Nonspecific Mus musculus 50 Akap2 ENSMUSG00000038729 ENSMUST00000102905,ENSMUST00000102904,ENSMUST00000098066,ENSMUST00000030049 3 4 14 82 4 57660979 57701293 GATAACATTCAGAGGCTGGA 59 57701338 57701356 AGGATGATCTGCTCTTTGG 59 NA Mus musculus 50 Akap2 ENSMUSG00000038729 ENSMUST00000098065,ENSMUST00000107600,ENSMUST00000071723,ENSMUST00000107599,ENSMUST00000098064,ENSMUST00000107598 2 6 14 87 4 57896065 57905750 TGATAGTAGTGTCCTGGAGG 59 57905800 57905818 CTGGTTAGCGTAAATCCCT 59 NA Mus musculus 50 Akap2 ENSMUSG00000038729 ENSMUST00000098066,ENSMUST00000030049,ENSMUST00000095073,ENSMUST00000043456 1 4 14 87 4 57896061 57899168 TGGATGATAGTAGTTACACCTC 58 57905757 57905775 CTCTTCCTCCGATTAACCC 59 NA Mus musculus 50 Stim2 ENSMUSG00000039156 ENSMUST00000071083,ENSMUST00000087347,ENSMUST00000113841 1 3 3 96 5 54507421 54509518 GAGAAACAATGGGAAGTGC 59 54509578 54509596 ACATCTCAAGGCTTGAAGG 59 NA Mus musculus 50 Polg ENSMUSG00000039176 ENSMUST00000036427 1 1 2 152 7 86605524 86605543 TACTATGAGCATGCACATGG 59 86605285 86605407 CAAGATGAGATCTCGCTGG 59 NA Mus musculus 50 Rpl22l1 ENSMUSG00000039221 ENSMUST00000043867 2 1 1 262 3 28705662 28705680 CAGTTTCTACGGGAGAAGG 59 28706233 28706252 TAGTCCTCAGACTCTGAACC 59 NA DesignNoJunction Mus musculus 50 Megf9 ENSMUSG00000039270 ENSMUST00000107359,ENSMUST00000037881 3 2 2 80 4 70096512 70109706 TGCACCATTGAATCTGGAG 59 70096450 70096469 ACATTTATTGCAGTTCTGGC 59 NA Mus musculus 50 Foxk2 ENSMUSG00000039275 ENSMUST00000106114,ENSMUST00000106113 3 2 3 107 11 121160162 121160910 AGTCAGAGTGAAAGTAGAACC 59 121160979 121160997 ATGGTCACTGTCTGAACAG 59 NA Mus musculus 50 Spdyb ENSMUSG00000039296 ENSMUST00000110742 2 1 2 93 5 143983079 143983098 TCCTGTCTATGGTCATAGCT 59 143980438 143983021 ATTGTAAGCCTCACAGAGC 59 NA Mus musculus 50 Sec24c ENSMUSG00000039367 ENSMUST00000048657 3 1 2 114 14 21503141 21503159 TTATGAGAGCCCATACCCT 59 21503236 21505742 AATAACCTGAATAGGGCTGG 59 NA Mus musculus 50 Icmt ENSMUSG00000039662 ENSMUST00000048892,ENSMUST00000087301 2 2 2 62 4 151672798 151672816 CCATCAGAGCTTGTTTCCT 59 151672842 151672860 ACTGGCTGAAACTTAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dnajc11 ENSMUSG00000039768 ENSMUST00000062904 2 1 3 89 4 151348342 151348360 TGAGAGGAAGATTTCCCGA 59 151348412 151351067 CTGTTCAGCTTGACTTTGAG 59 NA Mus musculus 50 1810074P20Rik ENSMUSG00000040359 ENSMUST00000038705 1 1 2 96 4 25205837 25207778 TCCGAGGTGGTTATTAATGTG 59 25205761 25205779 GTTGTCCCAGTACCATCTG 59 NA Mus musculus 50 Atp1b2 ENSMUSG00000041329 ENSMUST00000047889,ENSMUST00000094075 3 2 2 81 11 69415073 69415091 TCATGTTCCCTGCTAATGG 59 69414898 69415031 GGCTGAGTATAGTTTACATGGA 59 NA Mus musculus 50 Stx3 ENSMUSG00000041488 ENSMUST00000069285,ENSMUST00000112965,ENSMUST00000112964 3 3 5 98 19 11857586 11857604 AGTTGAATGTCATGCACAC 58 11856161 11857525 TTATCAATTTCTTCCGAGCC 57 NA Mus musculus 50 Ccdc64 ENSMUSG00000041609 ENSMUST00000061383 1 1 3 65 5 116112724 116112742 GATACAGAGCATCGTGGAC 59 116111496 116111514 TCTAAGGAGTCATCGTCCA 59 NA DesignNoJunction Mus musculus 50 OTTMUSG00000010750 ENSMUSG00000041735 ENSMUST00000036876 3 1 1 99 4 144295098 144295116 CATGAGACAGACTCAGTGG 59 144293801 144293819 AGTGGATGGAAGCATTCAG 59 NA DesignNoJunction Mus musculus 50 Dmtf1 ENSMUSG00000042508 ENSMUST00000040604 3 1 5 107 5 9130642 9131283 CTCAAGGAACAACTGTGGA 59 9130553 9130572 CTTCTTCTCCCTTCTGACTG 59 NA Mus musculus 50 Safb2 ENSMUSG00000042625 ENSMUST00000075510,ENSMUST00000049279 1 2 2 90 17 56714833 56714851 TTTGACGCTTGTAATGACG 58 56714359 56714780 GTTCTTCCTTAACAGAGCTC 57 NA Mus musculus 50 Obfc1 ENSMUSG00000042694 ENSMUST00000086929 3 1 3 94 19 47582359 47583224 CACTAATCTTGTAACCACCA 57 47576196 47582302 CCTTCTCCATATGGTTTGG 57 NA Mus musculus 50 Egflam ENSMUSG00000042961 ENSMUST00000058593 1 1 2 80 15 7172814 7181596 GCCAGAAAGCTATTATAGAAGC 58 7172755 7172775 GGATATTTGGGTTGTCATACG 58 NA Mus musculus 50 Zfp691 ENSMUSG00000045268 ENSMUST00000052715,ENSMUST00000106355 3 2 2 63 4 118843395 118843413 CCAGAGACAGATGAGAAGC 59 118843350 118843368 TGGAGGTATTGTTGAAGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lca5l ENSMUSG00000045275 ENSMUST00000113806,ENSMUST00000054855 2 2 2 61 16 96384259 96385530 TCCGAAAGTTTCTTCAACG 58 96384216 96384234 TATTTACAGATGGCAGGCT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Hcrt ENSMUSG00000045471 ENSMUST00000107360 3 1 2 277 11 100623471 100624144 TTCTACAAAGGTTCCCTGG 58 100622516 100622534 CCCTTGTATTGGACCTCTC 59 NA DesignNoJunction Mus musculus 50 Gpr158 ENSMUSG00000045967 ENSMUST00000055946,ENSMUST00000102949 2 2 2 80 2 21321044 21474934 CAACTCAGAGTGTATGCCA 59 21474978 21474996 TGATAGAACCCTGCTTTGC 59 NA Mus musculus 50 Pofut1 ENSMUSG00000046020 ENSMUST00000049863,ENSMUST00000099192,ENSMUST00000109794 3 3 4 106 2 153075517 153085341 AATGGACCCAGAGATTTCC 58 153085411 153085429 CATGTACTTCTGGAGCTCC 59 NA Mus musculus 50 NM_029294.2 ENSMUSG00000046292 ENSMUST00000056845 1 1 1 60 12 35669988 35670007 CAATTTGTATGCAGAGCCAG 59 35670027 35670048 CCTCCAGTCAGAAATATTCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Csnk2a2 ENSMUSG00000046707 ENSMUST00000093266 1 1 2 80 8 97981381 97984588 TGGACTATCAGCTTGTTCG 59 97981319 97981340 GGTCTATGTGGTACTTCTTCAG 59 NA Mus musculus 50 Tmem164 ENSMUSG00000047045 ENSMUST00000087333,ENSMUST00000112892,ENSMUST00000054263,ENSMUST00000112896 3 4 9 81 X 139117485 139186594 TGATGCATATCTTCCTCCTG 58 139205514 139205533 CCATTCAACATGTGCATCTG 59 NA Mus musculus 50 Foxi1 ENSMUSG00000047861 ENSMUST00000060271 1 1 1 60 11 34105574 34105592 TCTTCAACCAGTTCAGTCC 59 34105532 34105552 GGGAATAGGATACCGTTAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Odz4 ENSMUSG00000048078 ENSMUST00000107162,ENSMUST00000084996 3 2 6 115 7 104001078 104011963 CATCCTGGAGATGAGTCAC 59 104012042 104012060 TGGACTTGACCTTGAAGAC 59 NA Mus musculus 50 Thnsl1 ENSMUSG00000048550 ENSMUST00000102952,ENSMUST00000102951 3 2 4 99 2 21131660 21134598 AGCTTGCTTGAAACTTTGG 59 21134661 21134679 ACGTGGTTCTGATTAGAGG 58 NA InUTR Mus musculus 50 4732456N10Rik ENSMUSG00000048699 ENSMUST00000023714 2 1 1 85 15 101386781 101387613 CAGACCAAGTATGAGGAGC 59 101386714 101386732 TTCAGCTCAGAGATCTCCA 59 NA Mus musculus 50 Slc35e4 ENSMUSG00000048807 ENSMUST00000109995,ENSMUST00000051207 2 2 2 187 11 3813147 3813165 ATGAAGGCATGATGACCTC 59 3812978 3812996 GAAGATCCACTTGTTGAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tmc8 ENSMUSG00000050106 ENSMUST00000050874 2 1 2 112 11 117645225 117645436 CTGAAACTGAGACTCCAGTG 59 117646119 117646138 AGATAGGTGTTGTTGAAGGC 59 NA Mus musculus 50 Tmc8 ENSMUSG00000050106 ENSMUST00000050874 3 1 2 112 11 117645226 117645436 TGAAACTGAGACTCCAGTG 58 117646120 117646139 GAGATAGGTGTTGTTGAAGG 57 NA Mus musculus 50 Rgs13 ENSMUSG00000051079 ENSMUST00000052375,ENSMUST00000111941 1 2 2 93 1 146014467 146018554 CCTTCAAACCTTACTTTGGA 57 145987983 145988001 ATGCTGTGTACACTATTGG 57 NA Mus musculus 50 Cacna1c ENSMUSG00000051331 ENSMUST00000112790 3 1 5 160 6 118602689 118602707 TTCTCATCCTGCTCAACAC 59 118587820 118601972 ACAGAAATAGTGCTTGGGT 58 NA Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000099981,ENSMUST00000011934,ENSMUST00000111882,ENSMUST00000111865,ENSMUST00000099980,ENSMUST00000045194 1 6 14 152 2 76807338 76807685 CTAAGGAGGTGAAACAAGAG 57 76807205 76807223 GAGCAGGTTGTATATGCAC 58 NA Mus musculus 50 Senp7 ENSMUSG00000052917 ENSMUST00000089362,ENSMUST00000089360 3 2 4 84 16 56180683 56184269 GATTCCCAAAGTACCGAGG 59 56184884 56184905 CTTTCAGGGAGTCTAGTATGAG 59 NA Mus musculus 50 Jam2 ENSMUSG00000053062 ENSMUST00000098407 2 1 2 269 16 84807180 84809602 TCTCCAAGGTGACTTTAAAGAC 59 84809831 84809850 ATGTAATACCATCCAGGCTG 59 NA DesignRelaxed Mus musculus 50 Nrd1 ENSMUSG00000053510 ENSMUST00000102736 3 1 3 88 4 108701401 108701419 ATACACATGCCAGACTGAG 59 108701469 108707296 GATTGGAACAACTTTGGACTG 59 NA Mus musculus 50 Kcnip1 ENSMUSG00000053519 ENSMUST00000101368,ENSMUST00000109340,ENSMUST00000065970,ENSMUST00000109341,ENSMUST00000093194 2 5 5 93 11 33534579 33534598 ATGTGGATGTCTTCTTCCAG 59 33530588 33533155 ATGTTGTCATCCTCCTGAC 58 NA Mus musculus 50 Sgol2 ENSMUSG00000054770 ENSMUST00000114410,ENSMUST00000068000 3 2 2 61 1 58024359 58024377 TTTAGTGGTCGTTTCCCTC 59 58022360 58022380 CCATCACGGTTAATAATGCAC 59 NA DesignNoJunction Mus musculus 50 A630091E08Rik ENSMUSG00000055446 ENSMUST00000069035 3 1 1 60 7 105692189 105692207 TCTACCTTCCCAGACAGAG 59 105692147 105692166 AGTGGGAAGAGATTTAGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sftpb ENSMUSG00000056370 ENSMUST00000114105,ENSMUST00000070437 1 2 2 71 6 72256961 72257157 CACACTCAGGACTTCTCTG 59 72257192 72257210 GATCAGAGTTCTGCAAAGC 58 NA DesignRelaxed Mus musculus 50 Mex3b ENSMUSG00000057706 ENSMUST00000082237 3 1 1 72 7 90017432 90017450 TAACAAGAACACGGCTCTC 59 90017485 90017504 CACTTGGATAGTGGTCTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Spna2 ENSMUSG00000057738 ENSMUST00000113719,ENSMUST00000113717,ENSMUST00000046257 3 3 6 110 2 29855485 29855503 TATGTGAAGAAGCTGGACC 58 29855575 29857763 CAGAGACTGATATTGGTTGTC 58 NA Mus musculus 50 Sept9 ENSMUSG00000059248 ENSMUST00000093907,ENSMUST00000106351,ENSMUST00000106354,ENSMUST00000019038,ENSMUST00000106352,ENSMUST00000100193,ENSMUST00000106349 3 7 7 82 11 117213584 117213931 CACCCACGATATTGAAGAG 57 117213977 117213995 CATTGTTGATGTGGTCTCC 58 NA Mus musculus 50 Sfmbt2 ENSMUSG00000061186 ENSMUST00000070103 3 1 8 88 2 10359583 10359601 ACAAGTACTCAGACTGGAC 58 10359650 10359673 GCAATACATACATTCCAGAAGG 59 NA Mus musculus 50 BC023744 ENSMUSG00000066894 ENSMUST00000111967,ENSMUST00000086464,ENSMUST00000111965 2 3 3 134 5 117801676 117801695 ACAGGAGACAAATGAGACAG 59 117801791 117802769 TCACTGTCATCCTGAAACTC 59 NA Mus musculus 50 Zfp160 ENSMUSG00000067942 ENSMUST00000115551,ENSMUST00000088811 3 2 2 68 17 21157137 21157155 GAATTACAGCAACCTGCTC 58 21157693 21157712 TGTTCCAACTTAGACATAGC 57 NA DesignNoJunction Mus musculus 50 Zfp213 ENSMUSG00000071256 ENSMUST00000095606 1 1 1 105 17 23696361 23696379 AGAGAAAGAACTCGAGGGA 59 23695204 23695222 ATAGGCACTTCAGTCTGTC 58 NA DesignNoJunction Mus musculus 50 2610030H06Rik ENSMUSG00000073131 ENSMUST00000101496 3 1 5 75 X 69065460 69065480 TAATGATCACGGTTCCTATCG 59 69081354 69081372 GAAGCCTTTGTCCTCAGAG 59 NA DesignNoJunction Mus musculus 50 2610002J02Rik ENSMUSG00000073684 ENSMUST00000105627,ENSMUST00000097747,ENSMUST00000105628,ENSMUST00000105626 2 4 4 122 4 154625046 154625065 TAAATTCTGGTCGAACTCCC 59 154630248 154630266 TATCCACATCTAGCTGGGT 59 NA DesignNoJunction Mus musculus 50 Il4i1 ENSMUSG00000074141 ENSMUST00000107890,ENSMUST00000033015 2 2 2 107 7 52093534 52093552 GACATCTACCAGATGGCAC 59 52094583 52094705 GAGGAGGTATTCCAGAAGC 59 NA Mus musculus 50 Ceacam1 ENSMUSG00000074272 ENSMUST00000098672 2 1 4 80 7 26256867 26256887 CGAGTATCAGTGTGAAATCTC 58 26250530 26256827 GTCACTTCCCATATTATGTCC 57 NA Mus musculus 50 BC089597 ENSMUSG00000074639 ENSMUST00000092058,ENSMUST00000026464 3 2 2 201 10 127313456 127313934 AATACCTGGCATCCTATCTG 58 127314097 127314116 CAGTATAGAAGAGCATCCAC 57 NA DesignRelaxed Mus musculus 50 BC089597 ENSMUSG00000074639 ENSMUST00000026464 2 1 2 140 10 127303871 127303889 CAGAGAATATTGTGGCAGC 58 127311953 127311972 AGTACACTTGCAAGTCCTG 59 NA Mus musculus 50 Gabrr3 ENSMUSG00000074991 ENSMUST00000099653 3 1 2 155 16 59433236 59434403 GATGCCTATAATGAAGAGGAC 57 59434520 59440315 TCTATAGTACCACCCTGTG 57 NA Mus musculus 50 Olfr1006 ENSMUSG00000075211 ENSMUST00000099919,ENSMUST00000099917 3 2 2 60 2 85515183 85515201 TTGTTGACATTGTCAGGGA 59 85515141 85515160 GCAGTCTAGAATCAATTCGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-69 ENSMUSG00000076548 ENSMUST00000103349 2 1 1 60 6 69233967 69233986 TGTAAGTTACATGCACTGGT 59 69233926 69233944 ATAAATCCAGGGTTTGGGC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A2AGY4_MOUSE ENSMUSG00000078503 ENSMUST00000066794,ENSMUST00000105742,ENSMUST00000105741 2 3 3 98 4 145120806 145124724 AAATACACCACAGGGTCTG 59 145124786 145124804 ATGTACAGTCTCCTCTGAG 57 NA DesignRelaxed Mus musculus 50 NP_001078989.1 ENSMUSG00000078625 ENSMUST00000106914,ENSMUST00000106915 1 2 2 80 4 101661517 101661536 CTCAGCAGAGACTAAGAGTG 59 101661578 101662573 ACATAGTACTCCTTCACACC 58 NA Mus musculus 50 Etohi1 ENSMUSG00000078889 ENSMUST00000109028,ENSMUST00000109026,ENSMUST00000109025,ENSMUST00000109017 2 4 9 136 2 175694825 175800091 GGATTTAGTCACCTATGATGAC 58 175694504 175694731 AACTGTAACCTATAGCTGTGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Etohi1 ENSMUSG00000078889 ENSMUST00000109022,ENSMUST00000109023,ENSMUST00000109020 2 3 9 136 2 175791976 175930121 GGATTTACTCACCTATGATGAC 58 175791656 175791882 AACTGTAACCTATAGCTGTGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 0610010B08Rik ENSMUSG00000078890 ENSMUST00000109031,ENSMUST00000109030,ENSMUST00000109029 2 3 3 63 2 175650211 175650229 GAGTCTCTACAAGGGTGTG 59 175650253 175650479 CCAAATGTAACCTATAGCTGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Hoxd3 ENSMUSG00000079277 ENSMUST00000111983,ENSMUST00000053932,ENSMUST00000111982,ENSMUST00000047830 3 4 4 69 2 74582565 74582583 AAGAATCCCGACAGAACTC 58 74584381 74584400 CTCTTGTCCTCACAGTTCTC 59 NA DesignNoJunction Mus musculus 50 NP_001092772.1 ENSMUSG00000079534 ENSMUST00000114119 3 1 1 226 X 71889258 71889276 GTGCTATTGCATCATCCAG 58 71886798 71886816 ACATATTCTGACGAGTCCA 57 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 2610524H06Rik ENSMUSG00000079849 ENSMUST00000100850 2 1 1 60 5 115272641 115272659 AGAAGCTTAATCGAACCAG 57 115272599 115272617 GTAAGCCAAGAGGTAAAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hist1h2ao ENSMUSG00000069272 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 ENSMUSG00000074087 ENSMUSG00000074087 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-1196 ENSMUSG00000080654 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-1-2-as ENSMUSG00000080662 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Dgke ENSMUSG00000000276 ENSMUST00000107894,ENSMUST00000000285 2 2 2 80 11 88913788 88913806 CGTAGTGGAACTAACATGG 57 88912112 88913744 AGTTACATCAAACACCTGG 57 NA Mus musculus 50 Sp1 ENSMUSG00000001280 ENSMUST00000001326 2 1 1 85 15 102260574 102261160 ACGTACACATACAGGAGAG 58 102261209 102261227 TGATATGCTTTGACAGGTG 57 NA Mus musculus 50 Tbx21 ENSMUSG00000001444 ENSMUST00000001484 2 1 1 81 11 96961393 96962804 AATGTGACCCAGATGATCG 59 96961330 96961348 GCTCTCCATCATTCACCTC 59 NA Mus musculus 50 Tulp3 ENSMUSG00000001521 ENSMUST00000001562 1 1 1 80 6 128277610 128277628 ATAAGAAAGGCATGGACCG 59 128276893 128277569 GAAGAAATATCTTGCGGTTCTC 59 NA Mus musculus 50 Mnx1 ENSMUSG00000001566 ENSMUST00000001608 3 1 1 80 5 29801345 29801363 TCAACAAGTACCTGTCTCG 58 29800759 29801302 ACCAAATCTTCACCTGAGTC 59 NA Mus musculus 50 Brpf1 ENSMUSG00000001632 ENSMUST00000113122,ENSMUST00000113121,ENSMUST00000113119,ENSMUST00000001677,ENSMUST00000113117 1 5 5 80 6 113265480 113265499 AAGATCTTGGCAGAGAAGAG 59 113265542 113266537 GGTGATCTTACTGAGCCTG 59 NA Mus musculus 50 Btbd14b ENSMUSG00000001910 ENSMUST00000001975 1 1 1 187 8 87197193 87198671 TGTCAAGTACTACTGCCAG 58 87197024 87197043 GTTCTATCTTGCAAGTGTCG 58 NA Mus musculus 50 Nr1h3 ENSMUSG00000002108 ENSMUST00000111356,ENSMUST00000111354,ENSMUST00000111355,ENSMUST00000002177,ENSMUST00000111358 2 5 5 129 2 91032889 91033781 TTCTCCTGATTCTGCAACG 59 91032778 91032796 CCCTATCCCTAAAGCAACC 59 NA Mus musculus 50 Dhrs1 ENSMUSG00000002332 ENSMUST00000002403 2 1 1 80 14 56362339 56362357 CCACCAACAAGTCTTTCTG 58 56360139 56362295 ATAAGTAGTGGCCTCTGAG 57 NA Mus musculus 50 Tmem161a ENSMUSG00000002342 ENSMUST00000002413,ENSMUST00000116462 1 2 2 112 8 72701410 72701428 GTGTACCTCTTCACAGAGG 59 72701504 72702780 ATGAGGAACACCTTCAGAG 58 NA Mus musculus 50 Pex6 ENSMUSG00000002763 ENSMUST00000002840,ENSMUST00000066348 3 2 2 227 17 46849331 46850872 CAGAGGTATTTGGAAGGCT 58 46851452 46851470 TTCCAGGATCTCAACTTGC 59 NA DesignNoJunction Mus musculus 50 Atg4d ENSMUSG00000002820 ENSMUST00000065005 2 1 1 162 9 21075220 21075238 AAATCTGTGGTCATCCTGG 59 21076980 21077088 GAAAGTCATCCTGATAGCCA 59 NA Mus musculus 50 Phb2 ENSMUSG00000004264 ENSMUST00000004375,ENSMUST00000100958 1 2 2 77 6 124663103 124663121 TCATCTATGACATTCGGGC 59 124664004 124664022 AGATGTTCACCATCTGCAG 59 NA DesignNoJunction Mus musculus 50 Eif4g2 ENSMUSG00000005610 ENSMUST00000005750,ENSMUST00000106666 2 2 2 80 7 118218048 118218201 GCTGCCAGAAATTGATCAG 59 118217986 118218006 AGGAGTGGGAATAAGAAACTC 59 NA Mus musculus 50 Tnfsf14 ENSMUSG00000005824 ENSMUST00000005976 3 1 1 80 17 57332010 57332333 GATACAAGATCAACGATCTCAC 58 57330331 57330350 CCACCAATACCTATCAAGCT 59 NA Mus musculus 50 Kptn ENSMUSG00000006021 ENSMUST00000006178 1 1 1 80 7 16708555 16708574 GGACTACATCAGTTTGAGGA 58 16708617 16709133 AAGCCAAAGGACACTACTG 59 NA Mus musculus 50 Arpp19 ENSMUSG00000007656 ENSMUST00000007800 3 1 1 125 9 74900095 74900113 CAAGGTATCCTCACTTGGG 59 74904480 74904499 GCTTGTTCTTCATCTTTGCT 59 NA DesignNoJunction Mus musculus 50 Tmem87b ENSMUSG00000014353 ENSMUST00000110325 2 1 1 62 2 128674771 128674789 ATTCCCTCTTCGTTCACAG 59 128676058 128677028 CATAATTTCCTCATCTGAGTCC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Birc5 ENSMUSG00000017716 ENSMUST00000106322 3 1 3 241 11 117710698 117710717 CTGTACCTCAAGAACTACCG 59 117716566 117716584 TTGCAGTCTCTTCAAACTC 57 NA DesignNoJunction, InUTR Mus musculus 50 Crk ENSMUSG00000017776 ENSMUST00000017920,ENSMUST00000108425 2 2 4 66 11 75506020 75506038 AGAAGTATAGACCTGCCTC 57 75516871 75516889 TAACCTTTACCAGCTCACC 58 NA DesignNoJunction, InUTR Mus musculus 50 Gpx3 ENSMUSG00000018339 ENSMUST00000082430 3 1 1 84 11 54722632 54722947 TTTCCTGAAGAACTCCTGC 59 54722995 54723013 GTCATGGATCTTCATGGGT 59 NA Mus musculus 50 Tbx3 ENSMUSG00000018604 ENSMUST00000018748,ENSMUST00000079719 1 2 2 103 5 120128834 120130414 CCTCAAAGATCTGTGTCCC 59 120130481 120130499 TAGTGGTGGAAATCTTGGC 59 NA Mus musculus 50 Atp5g3 ENSMUSG00000018770 ENSMUST00000111996,ENSMUST00000018914 1 2 2 80 2 73746754 73747248 TATGCCAGAAACCCTTCAC 59 73746692 73746710 GAGACCCATAGCTTCAGAC 59 NA Mus musculus 50 Amac1 ENSMUSG00000018776 ENSMUST00000102586 3 1 1 283 11 69574655 69575134 AAGTCCAAGAAGAGATGGC 59 69574390 69574410 CTTAAGTAACAAGGCAATGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tm4sf5 ENSMUSG00000018919 ENSMUST00000019063 3 1 1 97 11 70323839 70324074 CTTCCAAGAAACAGAAGGC 58 70324135 70324153 AGAAGAGTGTCACATTCCA 58 NA Mus musculus 50 Ccl9 ENSMUSG00000019122 ENSMUST00000019266,ENSMUST00000108129 3 2 2 87 11 83389402 83389422 CTATAACTCACGGATTCAGTG 57 83388988 83389353 GCTGATAAAGATGATGCCC 58 NA Mus musculus 50 Ahr ENSMUSG00000019256 ENSMUST00000116436,ENSMUST00000110811,ENSMUST00000019400 1 3 3 80 12 36199793 36211367 AGAGCTTCTTTGATGTTGC 58 36199731 36199750 CTCTGATTTGTGCTCTACAC 58 NA Mus musculus 50 Grb7 ENSMUSG00000019312 ENSMUST00000019456 1 1 1 99 11 98313224 98313441 CCTCATCCAGAACTTCCTG 59 98313504 98313522 TTTCCAAAGCTTTCGACCT 59 NA Mus musculus 50 Grm1 ENSMUSG00000019828 ENSMUST00000044306,ENSMUST00000105561,ENSMUST00000105560 2 3 3 81 10 10453075 10461244 GTCAGATTAAGGTCATACGG 57 10453013 10453032 TCTTGCACAAACTCATTCTC 58 NA Mus musculus 50 Echdc1 ENSMUSG00000019883 ENSMUST00000020034 2 1 1 83 10 29037459 29037477 CTCCTAAAGAAGCAGAACG 57 29037524 29042094 TAGCATCATGACACCTGAG 58 NA Mus musculus 50 Slu7 ENSMUSG00000020409 ENSMUST00000020681 3 1 1 81 11 43258263 43258283 GGGATACAAATGTTGTCACTC 58 43258326 43258697 CTCCTCTGAGTTAACGCTC 59 NA Mus musculus 50 Adcy1 ENSMUSG00000020431 ENSMUST00000020706 3 1 1 80 11 7038363 7038382 GAGAGGAACACCTTTCTGAG 59 7038425 7039048 GCCTGGGAATATCTTCCTC 59 NA Mus musculus 50 Dnmt3a ENSMUSG00000020661 ENSMUST00000020991,ENSMUST00000085826,ENSMUST00000111186 3 3 3 87 12 3897421 3897439 AGGAGATCATTGATGAGCG 59 3897605 3899208 CATGAGATACAAATGTCCTCG 58 NA Mus musculus 50 Pafah1b1 ENSMUSG00000020745 ENSMUST00000102520,ENSMUST00000021091 1 2 2 80 11 74493007 74493026 TGGGATTATAAGAACAAGCG 57 74491231 74492965 CGTCTTATGGAAATCCAAGG 58 NA Mus musculus 50 Spata20 ENSMUSG00000020867 ENSMUST00000041705 3 1 1 87 11 94340823 94341737 TGAAGCAGATTGTGATCTG 57 94340754 94340772 TTGTTAGGGACGTAGATGG 58 NA Mus musculus 50 Tmem101 ENSMUSG00000020921 ENSMUST00000021296 1 1 1 130 11 102017141 102017159 CTAGCTTCATGTCCTTCGG 59 102016009 102017047 CATACGGACCTTTAGCCAG 59 NA Mus musculus 50 Ap4s1 ENSMUSG00000020955 ENSMUST00000021338 2 1 1 80 12 52821648 52821666 TTAAACTGATCTACCGGCA 58 52821707 52823985 CATAGATAGCCATCTCATTCTC 57 NA Mus musculus 50 Otub2 ENSMUSG00000021203 ENSMUST00000021620 1 1 1 80 12 104639269 104641037 GATCCTCAAGTTCAAAGAGC 58 104641079 104641098 TTTCTGAACTTGTGTTCCTC 57 NA Nonspecific Mus musculus 50 Prpf4b ENSMUSG00000021413 ENSMUST00000021850,ENSMUST00000077853 2 2 2 81 13 34982505 34982525 GAGAATGTTGACACCTTTGAG 59 34982565 34983970 TCTGAGATGAGCCATTATTCTG 59 NA Mus musculus 50 1700026J04Rik ENSMUSG00000021414 ENSMUST00000021851 1 1 1 82 13 35005543 35006317 CTAACAAGAGCCATCTGGA 58 35005479 35005497 CTGTGATCTACTGTGAGCA 58 NA Mus musculus 50 Lpcat1 ENSMUSG00000021608 ENSMUST00000022099 3 1 1 80 13 73651394 73651806 GGAAGAATCACCTTTGATGAC 58 73651846 73651866 CTGATCAGGGTACAAGTAGTC 59 NA Mus musculus 50 Ptprg ENSMUSG00000021745 ENSMUST00000022264 1 1 1 80 14 13042798 13042819 GAAGTTAAGACCTTTACCAGGA 59 13042859 13043067 GCTTTGTTGTAACCATCGAC 59 NA Mus musculus 50 Fgf9 ENSMUSG00000021974 ENSMUST00000022545,ENSMUST00000074654 3 2 2 94 14 58702051 58702069 TATCAGTATAGCAGTGGGC 58 58702126 58728173 TTTCTGATCCATACAGCTCC 59 NA DesignNoJunction Mus musculus 50 2600011E07Rik ENSMUSG00000021986 ENSMUST00000022561 1 1 1 60 14 60998571 60998589 AATTCCCATTGAGTCCCAG 59 60998613 60998631 TTCTTGATGCTCCTTCTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp263 ENSMUSG00000022529 ENSMUST00000023176 2 1 1 84 16 3746821 3746841 CCATCAGGATCCTAGTAAGAG 58 3746887 3748159 AATGCTGGACTCTAGAGTC 58 NA Mus musculus 50 D330001F17Rik ENSMUSG00000022558 ENSMUST00000096385 1 1 1 80 15 76258061 76258080 TTTCCTCATCCAGTACAACG 59 76258368 76258687 TTAGAAGACACAACCAGCA 58 NA Nonspecific Mus musculus 50 Eaf2 ENSMUSG00000022838 ENSMUST00000075946,ENSMUST00000114829,ENSMUST00000114825 3 3 3 93 16 36808159 36808178 GGACTTCCAATCTTGTACAG 57 36800915 36808103 GCTTCTGCTTTCAGTTCTC 58 NA Mus musculus 50 Usp25 ENSMUSG00000022867 ENSMUST00000023580,ENSMUST00000060704 2 2 2 95 16 77114023 77114042 CAAAGAGCTCTTGTCTAAGG 57 77114099 77115145 GCTTGCTCGTTTAATTTCAG 58 NA Mus musculus 50 Masp1 ENSMUSG00000022887 ENSMUST00000023605,ENSMUST00000089883 1 2 2 80 16 23494821 23496166 CTACATGGCTGTAGATGTGG 59 23494760 23494780 ATGTAGTTGTGACAGTAGTGG 59 NA Mus musculus 50 Lalba ENSMUSG00000022991 ENSMUST00000023726 3 1 1 80 15 98312028 98312514 CTCCTGTGACAAGTTATTGG 58 98311967 98311985 TCGATTCCTTTGATAGCCA 58 NA Mus musculus 50 Slc11a2 ENSMUSG00000023030 ENSMUST00000023774,ENSMUST00000074905 3 2 2 202 15 100242646 100242664 GTATCTACCATGGTGTTGG 57 100239746 100240521 AAACAAGAGTACTCCTCCT 57 NA DesignRelaxed Mus musculus 50 Pcdhgc5 ENSMUSG00000023036 ENSMUST00000073447 1 1 9 140 18 37836530 37836548 TTGAAACGAAAGAAGACCC 57 37992950 37992968 TATCAAACTGGTTGTTGGG 57 NA DesignNoJunction Mus musculus 50 Gpr115 ENSMUSG00000023918 ENSMUST00000024711 2 1 1 84 17 42803465 42803484 ATATAATCTTCGCCTTGCTC 57 42800377 42800837 GCATCTCTTATCTTGTGATCC 58 NA Mus musculus 50 Slc23a1 ENSMUSG00000024354 ENSMUST00000025212 3 1 1 91 18 35781509 35781952 CTATCAACACAGGCATTCCT 59 35781437 35781455 CAGTATGAAAGCAAGGCAC 59 NA Mus musculus 50 Lipa ENSMUSG00000024781 ENSMUST00000049572 2 1 1 81 19 34598024 34599240 CAACATGAATGTGACCGAG 58 34597961 34597981 AATATAGCCATCTCCTGTCAG 58 NA Mus musculus 50 Kcnk4 ENSMUSG00000024957 ENSMUST00000025908 3 1 2 99 19 7002289 7002498 GAAGCAATCTTCTTGAAGTGG 59 7002210 7002228 GAGTGAGGACAAAGAGCAG 59 NA Mus musculus 50 Smndc1 ENSMUSG00000025024 ENSMUST00000025997 2 1 1 67 19 53455083 53455740 GAAAGGCCAGGTAAAGAGG 59 53455034 53455052 TTCCTACTCCAACTTTGCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Dusp21 ENSMUSG00000025043 ENSMUST00000026018 1 1 1 60 X 17723530 17723551 GATTCATTACGAGTTCAAGCTG 59 17723569 17723590 TATAGGAGAGTAGATCATGCGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ablim1 ENSMUSG00000025085 ENSMUST00000099294,ENSMUST00000111559,ENSMUST00000111550,ENSMUST00000111558,ENSMUST00000111555,ENSMUST00000079360,ENSMUST00000111546,ENSMUST00000111541,ENSMUST00000036802,ENSMUST00000111538,ENSMUST00000111544,ENSMUST00000111524 2 12 15 88 19 57207440 57209084 AGTACATCAGCAAGGATGG 59 57207370 57207388 GATAAACTGGTGACAGGCT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Arih1 ENSMUSG00000025234 ENSMUST00000026264 2 1 1 80 9 59242730 59242749 CTTGAACGAGATATTTCCCA 57 59241170 59242687 TCGACTCTCACAGTATCTG 57 NA Mus musculus 50 Atp5b ENSMUSG00000025393 ENSMUST00000026459 1 1 1 84 10 127522612 127522632 GTGAGGGCAATGATTTATACC 58 127522678 127523107 TATACCAACGCTACCTTGG 58 NA Mus musculus 50 R3hdm2 ENSMUSG00000025404 ENSMUST00000077046,ENSMUST00000105251,ENSMUST00000105250,ENSMUST00000105249,ENSMUST00000064793 1 5 5 83 10 126921201 126921219 ATTCCACTTCTAGCCATGC 59 126921266 126921571 AAACCTGGATCTGTTGAGG 59 NA Mus musculus 50 Phkg1 ENSMUSG00000025537 ENSMUST00000026617 1 1 1 86 5 130340968 130341802 GAAAGACTTGGTGTCTCGA 59 130340900 130340918 TCCTGAAAGAAAGGGTGTG 59 NA Mus musculus 50 Gsta3 ENSMUSG00000025934 ENSMUST00000027067 2 1 1 80 1 21239868 21239888 GTCCTTCATTACTTTGATGGC 59 21239930 21247420 TTCTTCAAACTCCACACCA 58 NA Mus musculus 50 4930511H11Rik ENSMUSG00000025983 ENSMUST00000027128 1 1 1 80 1 54316868 54316886 TAGTTGAGGAACAGACCAG 58 54316929 54320304 GAGTTTCTAATTGACCTCGT 57 NA Mus musculus 50 Bard1 ENSMUSG00000026196 ENSMUST00000027393 3 1 1 88 1 71134822 71136059 GCACATCTTCTGTAGTGGT 59 71134752 71134770 TCTTGAGGTCTAGGATCCA 58 NA Mus musculus 50 Lct ENSMUSG00000026354 ENSMUST00000073490 3 1 1 81 1 130190752 130190771 TCTGGATCACACTGAATGAG 59 130190394 130190708 CTGAAAGAGATCCCTGGAG 58 NA Mus musculus 50 Nucks1 ENSMUSG00000026434 ENSMUST00000062264 1 1 1 101 1 133824704 133824722 AAGCAGCTTCTAAGCAGAG 59 133824787 133826201 TGCCAGAATCTTTCTCCTG 59 NA Mus musculus 50 Ppfia4 ENSMUSG00000026458 ENSMUST00000027729 2 1 1 88 1 136200351 136200875 ATGAGATCAAGGATGTGCT 58 136200281 136200299 TAGGTTTCCTGCATAGTCC 58 NA Mus musculus 50 Bpnt1 ENSMUSG00000026617 ENSMUST00000027916,ENSMUST00000116478 1 2 2 259 1 187162075 187162093 TGTCATTGCTGAAGGAGAC 59 187169293 187170563 AAACCACAAGGTCTTCCTC 59 NA DesignRelaxed Mus musculus 50 Atf3 ENSMUSG00000026628 ENSMUST00000027941 1 1 1 81 1 192995550 192996263 CCTGCAGAAAGAGTCAGAG 59 192995487 192995507 CTGTTTCTCATTCTTCAGCTC 58 NA Mus musculus 50 Prkcq ENSMUSG00000026778 ENSMUST00000114853,ENSMUST00000102970,ENSMUST00000028118 2 3 3 84 2 11154281 11154299 CATCTCAGAAACAACCGTG 58 11154344 11157653 CAGCTCTAACCATATTTCTGTC 58 NA Mus musculus 50 Galnt5 ENSMUSG00000026828 ENSMUST00000028171,ENSMUST00000112616 1 2 2 80 2 57878558 57880252 GAGCTATCATTCAAGGTCTG 57 57880295 57880313 GTTTCTGAATATGTGGCCC 58 NA Mus musculus 50 Tor1b ENSMUSG00000026848 ENSMUST00000102851,ENSMUST00000028199 2 2 2 80 2 30809522 30811301 GATAAAGGTGTACCAGGACC 59 30811344 30811362 TCAAAGATGAAGACGGAGC 59 NA Mus musculus 50 Zdbf2 ENSMUSG00000027520 ENSMUST00000114132,ENSMUST00000029025,ENSMUST00000114131 3 3 3 92 1 63341544 63341565 GCTACTAATAACACTCTGATGG 58 63341618 63349229 CTCATTTGGTGCAGATCTG 58 NA Mus musculus 50 4833422F24Rik ENSMUSG00000027670 ENSMUST00000029213 1 1 1 139 2 165222825 165222843 CTCTTAGTAGCCACAGCTG 59 165221782 165222723 AGAACCTTATATGAGGCGTC 58 NA Mus musculus 50 Tm4sf1 ENSMUSG00000027800 ENSMUST00000029376 3 1 1 82 3 57096983 57097001 CATTGGGATGGATGAAGAG 57 57096832 57096938 GTACAGAAGAAAGCATCGAG 58 NA Mus musculus 50 S100a11 ENSMUSG00000027907 ENSMUST00000029515 1 1 1 80 3 93328050 93328069 GGAAACAACACTCAACTCTC 58 93328111 93329922 CTTCTGGTTCTTTGTGAAGG 58 NA Nonspecific Mus musculus 50 Col11a1 ENSMUSG00000027966 ENSMUST00000029583,ENSMUST00000092155,ENSMUST00000029582,ENSMUST00000029586,ENSMUST00000029585 3 5 5 81 3 113827139 113827236 GAGTAAAGGGAGCAGATGG 59 113832302 113832320 CCTTTGAATCCTGGAAAGC 58 NA Mus musculus 50 Pla2g12a ENSMUSG00000027999 ENSMUST00000061165 3 1 2 107 3 129584194 129584212 AAGAAGGTCTCAGGATTGG 58 129591867 129593195 CTATGTTCAGATGAACGCC 58 NA Mus musculus 50 A630047E20Rik ENSMUSG00000028030 ENSMUST00000029664 2 1 1 80 3 132368523 132368542 CATTACTTGAACAAGCATGG 57 132368585 132370760 TTTAATATGGCCCTTCCGA 58 NA Mus musculus 50 Acp6 ENSMUSG00000028093 ENSMUST00000090759 1 1 1 80 3 96970059 96970080 GAAACTGAGGAAGAATTACGTG 59 96970121 96970474 GTGGAGCGAATAAAGACCT 59 NA Mus musculus 50 Svep1 ENSMUSG00000028369 ENSMUST00000042850 1 1 1 80 4 58128796 58129371 TTAACATCACAGCTAGCGT 58 58128734 58128752 TCTTAATGAGTCGCTGCTG 59 NA Mus musculus 50 Gpx7 ENSMUSG00000028597 ENSMUST00000030332 2 1 2 139 4 108073594 108075816 GTACCTAACCCAGACTTCTG 59 108073474 108073492 TCACCTGCTCTGTAATACG 58 NA Mus musculus 50 Ndufs5 ENSMUSG00000028648 ENSMUST00000106206,ENSMUST00000030401 3 2 3 205 4 123393234 123393252 AACAGCCCTATAAGAACGC 59 123390110 123390131 GTATTTGCCCTCTTTCATTAGC 59 NA DesignNoJunction Mus musculus 50 Pnrc2 ENSMUSG00000028675 ENSMUST00000030436 1 1 1 100 4 135428365 135428823 AAGCAAACTGAAAGGTGAC 58 135428283 135428303 CTGTTCTTGGTTCTTACTAGC 58 NA InUTR Mus musculus 50 Mll5 ENSMUSG00000029004 ENSMUST00000094962,ENSMUST00000056291,ENSMUST00000115128,ENSMUST00000088401 2 4 4 81 5 22977616 22979311 ATATGTCAGATGGTGATACCAG 59 22979353 22979371 GGAGTATGCTGAAATGCAG 58 NA Mus musculus 50 Atad3a ENSMUSG00000029036 ENSMUST00000030903,ENSMUST00000105594 2 2 2 138 4 155127738 155128001 GAGTCTATCAGGACAGCTG 58 155125644 155125663 CAGAAGTAGCATTCTTTGCA 58 NA Mus musculus 50 Cd38 ENSMUSG00000029084 ENSMUST00000030964 2 1 1 81 5 44298777 44298796 AGTTTGGACCCAAATAAGGT 59 44298840 44299175 TTGAACATGCGTTACTGGA 59 NA Mus musculus 50 Pi4k2b ENSMUSG00000029186 ENSMUST00000031081,ENSMUST00000031082 1 2 2 80 5 53148190 53152116 ATGAATGGCGAGCATATCC 59 53152158 53152178 TCAAGTTTCGAGTCTCTTCAG 59 NA Mus musculus 50 Commd8 ENSMUSG00000029213 ENSMUST00000013693,ENSMUST00000101142 3 2 2 87 5 72552206 72552225 CAAAGTGAAACCGTACACTG 59 72551124 72552156 CAGGACCACCTTATTAGCG 59 NA Mus musculus 50 Mtf2 ENSMUSG00000029267 ENSMUST00000112623,ENSMUST00000112628,ENSMUST00000081567,ENSMUST00000112626 3 4 4 84 5 108533540 108535616 GGCATTGTGGATTATCAGAC 58 108535663 108535681 CTTCTTCTCCGCAAATGTG 59 NA Mus musculus 50 Bmp3 ENSMUSG00000029335 ENSMUST00000031278 1 1 1 86 5 99301876 99301895 TGGAGCGAATGGATTATCTC 59 99301943 99308765 TTTCAAAGACTTTGGCATGG 59 NA Mus musculus 50 Bcl7b ENSMUSG00000029681 ENSMUST00000031692 1 1 2 60 5 135653086 135655829 GAATTCCAGGATGAGAACAG 57 135655852 135655870 CCACCTTGAGTTGATAGAC 57 NA DesignRelaxed Mus musculus 50 Tsga14 ENSMUSG00000029790 ENSMUST00000115130 1 1 2 92 6 30630181 30643641 CTGAGTATCTGACCAGACG 58 30629421 30629439 AAACTCTGAGTTGTGAGGC 59 NA DesignNoJunction Mus musculus 50 Cand2 ENSMUSG00000030319 ENSMUST00000075995 3 1 1 120 6 115736987 115737153 CCTTCCTAAGAAAGTGCCC 59 115737237 115737255 ATCTGCTCTTCGTCATCAC 59 NA Mus musculus 50 Ercc2 ENSMUSG00000030400 ENSMUST00000062831,ENSMUST00000108460 1 2 2 84 7 19972172 19972291 CAACATCGACAATGTCTGC 59 19972339 19972357 GGTGTCTAAGTTGCTCTGG 59 NA Mus musculus 50 Zfp273 ENSMUSG00000030446 ENSMUST00000012725 3 1 1 110 13 67923217 67923235 GCAGATGAGTGTGAATGTC 58 67924041 67924059 GTATGGCTTGGAGAAAGCA 59 NA DesignNoJunction Mus musculus 50 Spns1 ENSMUSG00000030741 ENSMUST00000032994 3 1 1 80 7 133518707 133520195 CCAGACTGTGTTCATCTCC 59 133518645 133518665 AGGTACTTTCGATTGTACCTG 59 NA Mus musculus 50 Nomo1 ENSMUSG00000030835 ENSMUST00000033121 2 1 1 80 7 53300773 53301226 TGAACAAAGAGGATGTCCT 58 53301270 53301288 ACAGATAAACCAGGCTCTC 58 NA Mus musculus 50 Dctn5 ENSMUSG00000030868 ENSMUST00000033156 1 1 1 94 7 129278602 129278621 CTGGCAAATGTAAGAGTTGG 59 129278678 129281773 AAGAATGCAACACCTTTGC 59 NA Mus musculus 50 1500003O22Rik ENSMUSG00000030888 ENSMUST00000098148,ENSMUST00000033179 3 2 2 80 7 112882956 112883211 CCAAACAGTTCACAATTCCA 58 112882895 112882916 GAGTTAGGTGACATAGACTCAG 59 NA Mus musculus 50 Trim21 ENSMUSG00000030966 ENSMUST00000033264,ENSMUST00000106913 2 2 2 89 7 109708543 109708561 CACGTTAGATATTGACGCC 58 109708168 109708493 GTAATATGAACCCAACATGTCC 59 NA Mus musculus 50 Rbmx ENSMUSG00000031134 ENSMUST00000098470,ENSMUST00000033470,ENSMUST00000114730,ENSMUST00000114726 3 4 4 91 X 54644509 54644527 TAAGTCAAGAGGATTCGCT 57 54643400 54644454 TCCCATCTAAGGACTTTCC 57 NA Mus musculus 50 Zcchc18 ENSMUSG00000031428 ENSMUST00000033804,ENSMUST00000101227,ENSMUST00000113067 1 3 3 60 X 133529812 133529832 GTTGATCAGGATGATAAGGGA 58 133529851 133529872 CCGCTTATTTCTAAGGAATGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700128E19Rik ENSMUSG00000031510 ENSMUST00000033907 3 1 1 61 8 11721739 11721757 GTTACCGATGTGGAAGGAG 59 11721782 11721800 ATAGCACAAAGCAGAAGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Itfg1 ENSMUSG00000031703 ENSMUST00000034140 1 1 1 80 8 88355129 88355150 TGGTGATCTAATTCCTGATGTG 59 88334527 88355091 CATGATAAATCTCCTCCTAGCA 59 NA Mus musculus 50 Htr3a ENSMUSG00000032269 ENSMUST00000003826 2 1 1 80 9 48712844 48714398 ATCAATGAGTTTGTGGACG 58 48712782 48712801 GTAGTTCTGAACTTCACCTC 57 NA Mus musculus 50 Ttc21a ENSMUSG00000032514 ENSMUST00000035100 1 1 1 80 9 119853023 119853043 CTTTAGTCCTGAAGATGAAGC 58 119853084 119854073 TTTCAAGGATTCTTTGTCCG 58 NA Mus musculus 50 Deb1 ENSMUSG00000032526 ENSMUST00000035113 3 1 2 84 9 121619766 121619784 GAGAATGACCAGCTGATCC 59 121619830 121621699 GTAACACATGCTGATACTGGA 59 NA Mus musculus 50 Pccb ENSMUSG00000032527 ENSMUST00000035116 1 1 1 80 9 100899688 100913137 CATTCATGGTGAAGGACAC 58 100899626 100899644 GAGTGACATCCTCATTGGT 58 NA Mus musculus 50 Oas3 ENSMUSG00000032661 ENSMUST00000044833 1 1 1 81 5 121214300 121214318 TTCATAAACACTTGCCCTC 57 121211825 121214256 TATATCGAGTGACAACCTGG 58 NA Mus musculus 50 Acsl3 ENSMUSG00000032883 ENSMUST00000113521,ENSMUST00000035779,ENSMUST00000012393 2 3 3 84 1 78698021 78700065 GTCTGAAGATCATTGACCGT 59 78700112 78700130 AAAGCTGCCTCTACTTTCC 59 NA Mus musculus 50 Fbxo21 ENSMUSG00000032898 ENSMUST00000035579 1 1 1 86 5 118450525 118452029 TGAAGCATAAGAGGTACGG 58 118452079 118452097 TCATGTTTCGGATCCACTC 59 NA Mus musculus 50 Egr3 ENSMUSG00000033730 ENSMUST00000035908 1 1 1 69 14 70477405 70478720 GAGAATGTGATGGACATCG 57 70478752 70478771 GGAAAGAGCTCGAATAAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tcea1 ENSMUSG00000033813 ENSMUST00000081551 1 1 1 192 1 4879676 4880833 GACAGGAGATGATTATGTTGC 58 4882105 4882123 AGGAGGAATATTCCCACAC 58 NA Mus musculus 50 4732418C07Rik ENSMUSG00000034210 ENSMUST00000106525,ENSMUST00000106524,ENSMUST00000106522,ENSMUST00000074425 2 4 4 80 4 115425613 115429044 GGACTTCAGAAGAGTGTGG 59 115429086 115429106 CACAGTCTTCTGTATCACCTC 59 NA Mus musculus 50 Myo1d ENSMUSG00000035441 ENSMUST00000041065,ENSMUST00000070997 3 2 2 80 11 80493609 80495894 CTTTCTATCAGCTCCTCCAG 59 80493548 80493567 AGTTGTAGGATGAGAGTGAC 58 NA Mus musculus 50 Gdpd4 ENSMUSG00000035582 ENSMUST00000041860 3 1 1 81 7 105121473 105121492 ATACAGGATGGCAGATTACG 59 105121535 105122422 AGCAGCTATTTGTAGAGCTC 59 NA Mus musculus 50 1810020D17Rik ENSMUSG00000035642 ENSMUST00000072725,ENSMUST00000042627 1 2 3 108 7 104724145 104724163 ATGTATGTGAGGTTCCCTG 58 104699209 104699227 CAATGCCTTGTTTCTCCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Dok3 ENSMUSG00000035711 ENSMUST00000047877 3 1 1 114 13 55628764 55628782 TTCCTGATTACCACCACTG 58 55625917 55625935 ATCCTGACGAACATTCTCC 59 NA DesignNoJunction Mus musculus 50 Prickle1 ENSMUSG00000036158 ENSMUST00000048982,ENSMUST00000109255 2 2 2 60 15 93342908 93342926 ACTTGAAGAGTATGCATGG 57 93341201 93342884 GAAATAGAGCTGGATCTGC 57 NA DesignRelaxed Mus musculus 50 Edc4 ENSMUSG00000036270 ENSMUST00000040254 1 1 1 80 8 108416266 108416285 GTTCTCCTTTCCCTAATCCA 58 108416328 108416585 AGCTTCTTCCAAGTAGCTG 59 NA Mus musculus 50 2610024G14Rik ENSMUSG00000036285 ENSMUST00000047860,ENSMUST00000065065 2 2 2 81 5 77733261 77733279 AGAACCTTTGTCCTCAAGC 59 77728787 77733217 CTGACTGATTTCCCTGTAGG 59 NA Mus musculus 50 Tubb2c ENSMUSG00000036752 ENSMUST00000043584 1 1 1 101 2 25078880 25079463 TTCGTCTTTGGTCAGAGTG 59 25078797 25078815 TTCCTTTCTCACAACGTCC 59 NA Nonspecific Mus musculus 50 Snf1lk2 ENSMUSG00000037112 ENSMUST00000041375,ENSMUST00000068484 1 2 2 97 9 50806671 50806690 TGGATGCAGTAAACCTTGAG 59 50803765 50806613 GGTCTCCATTACCTGATACAG 59 NA Mus musculus 50 Pacrg ENSMUSG00000037196 ENSMUST00000041463 1 1 1 80 17 10970052 10970070 ATGTTATGAGCGAGGAGAC 58 10790137 10970008 TCAATCTCAACCTTCCAGG 58 NA Mus musculus 50 D430028G21Rik ENSMUSG00000037523 ENSMUST00000041362,ENSMUST00000110199 3 2 2 81 2 131067777 131068865 CCAGTAGAGAATTCAGAGCA 58 131068909 131068927 GAGAGGGTATCAAAGAGCC 59 NA Mus musculus 50 Fbxo34 ENSMUSG00000037536 ENSMUST00000095941 2 1 2 148 14 48127934 48145891 TATTCTGAGAACTGCTGAGTG 59 48148861 48148879 CAGTACAGCTTAAGGTGCA 59 NA InUTR Mus musculus 50 D630003M21Rik ENSMUSG00000037813 ENSMUST00000103121,ENSMUST00000046944 2 2 2 80 2 158031528 158034160 CAGTTCTTCCAGAAACTGGA 59 158031467 158031485 AAACTCTTGGATGGAAGCC 59 NA Mus musculus 50 Cpe ENSMUSG00000037852 ENSMUST00000048967 2 1 1 86 8 67087896 67087914 AAGAATGACGATGACAGCA 59 67085523 67087847 ATTGAAGTCTTGCATTCCAC 58 NA Mus musculus 50 Wdr20a ENSMUSG00000037957 ENSMUST00000109809 2 1 3 133 12 112017569 112017587 GACTTCAACCTCCTCACAG 59 112017684 112041628 GATGACAACAAGCCTTCCT 59 NA Mus musculus 50 Gcc2 ENSMUSG00000038039 ENSMUST00000057659 2 1 1 80 10 57734386 57734406 CTAAGGCTACTGCTTAAACAG 58 57734446 57735092 CTCTAAGGAATCCTTTAGCAG 57 NA Mus musculus 50 Spon1 ENSMUSG00000038156 ENSMUST00000046687,ENSMUST00000084696 3 2 2 81 7 120931996 120932014 GTTTCACGTTAATTGCCCT 58 120932057 120980347 TCATCTATGATCTGGAAGGTG 58 NA Mus musculus 50 Sbf2 ENSMUSG00000038371 ENSMUST00000106698,ENSMUST00000033058 2 2 3 81 7 117453724 117453744 AGTAGAAATGGTTATCCCTGC 59 117453002 117453683 GGTCTTGAGATCAAAGAAAGC 59 NA Mus musculus 50 Slc35f1 ENSMUSG00000038602 ENSMUST00000105473 2 1 1 143 10 52652939 52652957 TTCTCGTTTGTGGAATTGG 58 52653064 52741658 TTTCTTCTCCTTGTCGGAC 59 NA Mus musculus 50 Nudcd1 ENSMUSG00000038736 ENSMUST00000066292 1 1 2 60 15 44246329 44252280 CTTAACAGTGATGCTGATGAG 58 44246289 44246309 CTACAAGAGAAAGCTTCTCTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Zdhhc1 ENSMUSG00000039199 ENSMUST00000044286 3 1 1 83 8 108000973 108000991 CTGCAATAAGTGCGTATGC 59 108000630 108000926 AGAAAGAGCCGATAGTTCC 58 NA Mus musculus 50 Cdk5rap2 ENSMUSG00000039298 ENSMUST00000076541,ENSMUST00000084491 2 2 3 81 4 69925753 69927522 CTCTCGCCATCAAGATACG 59 69925690 69925710 GGCTATCCTTAATTTGCTGTC 59 NA Mus musculus 50 Ankar ENSMUSG00000039342 ENSMUST00000053499 2 1 1 80 1 72745042 72745061 ATGGACATTGATCTAGACGG 58 72736944 72744999 AATATCAACCAAACCTGCC 57 NA Mus musculus 50 Bahcc1 ENSMUSG00000039741 ENSMUST00000044985 3 1 1 151 11 120147722 120147915 AAGATCCAGTGTACAGAGC 58 120148030 120148048 GTCTTAGAAGTTTCAGGGC 57 NA Mus musculus 50 Tbc1d2 ENSMUSG00000039813 ENSMUST00000084621,ENSMUST00000107750 3 2 4 133 4 46650599 46658997 TCAAACTAGAGCAAGAGGA 57 46650484 46650502 TAGGGAGATGTTCTGAAGG 57 NA Mus musculus 50 Flywch1 ENSMUSG00000040097 ENSMUST00000045517,ENSMUST00000115465,ENSMUST00000086325 1 3 3 83 17 23897214 23897232 AGGATTGGAGACTCTGAGG 59 23893756 23893774 GTCTTTAGGAACTCAGGCC 59 NA DesignNoJunction Mus musculus 50 Fgfr1op2 ENSMUSG00000040242 ENSMUST00000067404 1 1 2 115 6 146538548 146543705 AACACTCAAAGGAGTTGCA 59 146543784 146543802 AAATATCCGCTCCTGTTCC 59 NA Mus musculus 50 Cbln3 ENSMUSG00000040380 ENSMUST00000063871 3 1 1 143 14 56502408 56502751 CAGGTACTGGTCAATGAGG 59 56501994 56502012 TGTGTTCAGCATCAGACTC 59 NA DesignNoJunction Mus musculus 50 Cdh12 ENSMUSG00000040452 ENSMUST00000075132 1 1 1 80 15 21508289 21513470 CCATGACTTCAGAAACAACAC 59 21513511 21513530 AGGAAATACAACTCCTGCTG 59 NA Mus musculus 50 Tex2 ENSMUSG00000040548 ENSMUST00000042780,ENSMUST00000103070 2 2 2 81 11 106428333 106428351 CCACAAATCACTCAAAGCT 58 106410220 106428291 CATCCATCCCTTTAGTATTTCG 58 NA Mus musculus 50 Nup88 ENSMUSG00000040667 ENSMUST00000108531,ENSMUST00000035283,ENSMUST00000108530 1 3 3 87 11 70779326 70781359 TGAATTGTAGCACCATCCC 59 70779257 70779275 TCACTTGGATACCATGCAG 59 NA Mus musculus 50 Cmtm5 ENSMUSG00000040759 ENSMUST00000111465 2 1 2 190 14 55555572 55555590 CAAGACCTTCCTGTCTTCC 59 55557710 55557728 CATCATAGGCAAAGACGGA 59 NA DesignNoJunction Mus musculus 50 Foxa3 ENSMUSG00000040891 ENSMUST00000036018 2 1 1 61 7 19600465 19608701 CGAGGTGTATTCTCCAGTG 59 19600422 19600440 AGGTCATGTAGGAGTTGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Abhd4 ENSMUSG00000040997 ENSMUST00000041197 1 1 1 127 14 54878970 54878989 CTATGGCTGATGATCTGGAG 59 54881385 54882339 CTTGTTCTGGAGACACTGG 59 NA Mus musculus 50 Grid1 ENSMUSG00000041078 ENSMUST00000043349 3 1 1 81 14 36265578 36333885 CCCATAAGGACATTTCAGG 57 36333929 36333948 AGTACTCATAGACAGCAGAG 57 NA Mus musculus 50 Rwdd2b ENSMUSG00000041079 ENSMUST00000039101 2 1 1 80 16 87437176 87437324 CCGAAATTACAGTGAGATCAG 58 87437116 87437134 TCTGCAGGTATGCTATCAG 58 NA Mus musculus 50 Stx3 ENSMUSG00000041488 ENSMUST00000047698,ENSMUST00000075304,ENSMUST00000069285,ENSMUST00000112965,ENSMUST00000112964 2 5 5 98 19 11861086 11861104 AGTTTGTGGAGGTGATGAC 59 11860240 11861025 TCTTGCCAGTAATTTCAAGC 58 NA Mus musculus 50 BC099381 ENSMUSG00000041722 ENSMUST00000070223 2 1 1 143 1 21359154 21359607 AGGCAAGATGATGCTACTG 59 21359714 21359732 GGAAACCTCGAGAAGTGAG 59 NA DesignNoJunction Mus musculus 50 Ccdc5 ENSMUSG00000041840 ENSMUST00000048192 2 1 1 81 18 77997247 77998185 TTTAATGCCGAGTCCATCTC 59 77996469 77996488 GGTAAGTTCAGCCTCTATGG 59 NA Mus musculus 50 Mvk ENSMUSG00000041939 ENSMUST00000112239,ENSMUST00000043760 3 2 2 85 5 114905940 114905958 AATATCCCTGGAGTGTGAG 58 114906004 114908913 CTATCAGCTCTTCTAGTACGAG 59 NA Mus musculus 50 Tnfrsf18 ENSMUSG00000041954 ENSMUST00000040274 1 1 2 201 4 155402145 155402608 AGACTTTGGACCAAAGACC 59 155402773 155402791 CTCACCAAGGGTATAGCTG 59 NA DesignRelaxed, InUTR Mus musculus 50 Pglyrp4 ENSMUSG00000042250 ENSMUST00000047745 2 1 1 81 3 90536984 90539374 ACAGAAGAAAGCTTGTCCC 59 90539419 90539437 AGGGAGAGTCATTCTGGAG 59 NA Mus musculus 50 Arl15 ENSMUSG00000042348 ENSMUST00000091201 2 1 1 108 13 114724319 114757795 AAAGAACTTGGAGGAGCTG 59 114757865 114757885 CTAAGTCATCCTCTGAAGAGG 59 NA Mus musculus 50 Aqp11 ENSMUSG00000042797 ENSMUST00000084986,ENSMUST00000055379 1 2 2 60 7 104886031 104886050 GAAAGGATCTTAGCTTGCAG 58 104885990 104886009 CTATGATGATCGCTTTGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Foxf1a ENSMUSG00000042812 ENSMUST00000050684 3 1 1 60 8 123610674 123610693 CTTCTCTTTCAATGCCATGG 59 123610716 123610734 ATAGTAAGATCCTCCGCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trp53rk ENSMUSG00000042854 ENSMUST00000065753 2 1 2 61 2 166618191 166618695 AATAAGAAGGGCAGAGTAAGTC 59 166618717 166618735 CTGATTACAAGATGCCGGT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 A430060F13Rik ENSMUSG00000043522 ENSMUST00000058450 2 1 1 190 11 94723041 94723060 AGAAAGAAAGTTCTGGCTCC 59 94722506 94722692 CTGAACAACCTGACTGTAGG 59 NA Mus musculus 50 Kcns3 ENSMUSG00000043673 ENSMUST00000055673 2 1 1 296 12 11126736 11156991 GGTGAACTTGACTTTACAGC 59 11099456 11099474 AGTTCCTCATCTTGTCCAG 58 NA DesignNoJunction, InUTR Mus musculus 50 Pcdhb14 ENSMUSG00000044043 ENSMUST00000052387 1 1 1 60 18 37608662 37608680 TTCCTTTCCTCTTGAAACC 57 37608704 37608722 AGTGCTCTTTCAGTTACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 A830010M20Rik ENSMUSG00000044060 ENSMUST00000100951,ENSMUST00000060553,ENSMUST00000112672 2 3 4 133 5 107933025 107933532 CAACTGCAGCAGTAAAGTC 59 107934025 107934043 ACTAAGTCCTTTGCCATCC 59 NA Mus musculus 50 EG329541 ENSMUSG00000044083 ENSMUST00000055893 1 1 1 110 2 153613388 153613406 TCATCAGGATCATGAAGGG 58 153613480 153614901 CATACTTCTGCCAAGTGAC 58 NA Mus musculus 50 Gm1123 ENSMUSG00000044860 ENSMUST00000076730 2 1 1 83 9 98914501 98914519 CACTTATCAGTGCAAGGTG 58 98911534 98914454 ACACTCCCAATGTGATCAG 59 NA Mus musculus 50 Sh2d5 ENSMUSG00000045349 ENSMUST00000105824,ENSMUST00000062126,ENSMUST00000105823,ENSMUST00000116271 2 4 5 186 4 137810659 137810678 GTCTCAAGATCTACAGTGGG 59 137811606 137812638 AGGATATGGACCTCTCCAG 59 NA Mus musculus 50 ENSMUSG00000045520 ENSMUSG00000045520 ENSMUST00000062127 3 1 1 63 3 135390604 135390625 GGACCCATGTATCTTACTAGTG 59 135390649 135390667 TTCTCTAAGGTACCTGGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ing1 ENSMUSG00000045969 ENSMUST00000116493,ENSMUST00000054399 2 2 2 60 8 11561740 11561758 GCGAAACAATGAGAATCGA 58 11561782 11561800 TGAGGTGATGTCATCATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Serinc4 ENSMUSG00000046110 ENSMUST00000110613,ENSMUST00000056312,ENSMUST00000067823 3 3 3 82 2 121277902 121278100 ACTGGTTCAGCTATGAGGA 59 121277838 121277856 TGAGGCAACTTTAACCCAG 59 NA Mus musculus 50 B230396O12Rik ENSMUSG00000046637 ENSMUST00000050220 2 1 1 124 4 154232180 154232198 ATGATGCTCACAAATCCCT 58 154232286 154233427 CTTTACTAGCTGGTTGGCA 59 NA Mus musculus 50 2310005G13Rik ENSMUSG00000046748 ENSMUST00000067173 3 1 1 144 16 57047204 57049465 ATTAGTAGCAATGGTTGGC 57 57047078 57047096 TAAGATCTTGGTCACACCC 58 NA Mus musculus 50 8030474K03Rik ENSMUSG00000046774 ENSMUST00000050654 3 1 1 81 X 98992712 98992732 ACTTATGGATCCCATATTCCC 58 98992775 98993066 TAACATCTCACACTGTGCA 58 NA Mus musculus 50 Ddit4l ENSMUSG00000046818 ENSMUST00000053855 3 1 1 83 3 137287164 137287182 TTTGAGCAGTAAGAACCCG 59 137287226 137288939 TAGTCGAAATCACTTAGCAGAC 59 NA Mus musculus 50 A530098C11Rik ENSMUSG00000047343 ENSMUST00000061421 2 1 1 97 1 44070608 44074038 CTCAGTAGAGTTCGACAGG 58 44070529 44070549 CGAACTGATAATGCTCTTGTG 59 NA Mus musculus 50 Zbtb44 ENSMUSG00000047412 ENSMUST00000115222 1 1 3 147 9 30869684 30869702 CAATGCTCATGCAGATGAC 59 30871919 30874254 TGGTTTAATTCCTGAGTGGA 58 NA Mus musculus 50 8030462N17Rik ENSMUSG00000047466 ENSMUST00000074653 2 1 2 80 18 77892029 77912650 CAGAGATACCAGATGGACC 58 77891967 77891986 CCACATTTATCACTTCTGGG 58 NA Mus musculus 50 Foxo3 ENSMUSG00000048756 ENSMUST00000105502,ENSMUST00000056974 1 2 2 162 10 41994679 41994697 GATCTACGAGTGGATGGTG 59 41917621 41917639 GATGATCCACCAAGAGCTC 59 NA DesignNoJunction Mus musculus 50 Gpr3 ENSMUSG00000049649 ENSMUST00000105911,ENSMUST00000052090 1 2 2 60 4 132766851 132766869 CTTTCCCTGTACAATGCTC 58 132766809 132766828 TCACATAAGTCCGAGTTACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Crh ENSMUSG00000049796 ENSMUST00000061294 2 1 1 72 3 19594341 19594359 CCCTTGAATTTCTTGCAGC 59 19594287 19594305 AGTATTCTTCACCCATGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr622 ENSMUSG00000050085 ENSMUST00000058744 1 1 1 60 7 110787939 110787957 GAATGCTCGTTCTAAAGCC 58 110787897 110787915 GGAGACAAGGATAGTGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxo46 ENSMUSG00000050428 ENSMUST00000053109 1 1 1 60 7 19721585 19721605 GTATAGCTTTCCGAATCTCCA 59 19721627 19721645 TTGGGTAAGTTGCCATCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr161 ENSMUSG00000051003 ENSMUST00000061541 1 1 1 60 16 3593252 3593271 GAAACCTTTCATCTACAGCC 58 3593294 3593312 AAGCACTTTCCTTAAAGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gfod1 ENSMUSG00000051335 ENSMUST00000055341 1 1 1 130 13 43398712 43398730 TGAGCGTTCCTTTCTACAC 59 43296600 43398618 ATTCTTGCCTATTCCCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr829 ENSMUSG00000051414 ENSMUST00000058411 1 1 1 60 9 18661143 18661161 GGACTCACAGATGATACCA 58 18661183 18661203 GGTACATGGAAAGAAAGACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 4930562D19Rik ENSMUSG00000051427 ENSMUST00000093381,ENSMUST00000101626 1 2 2 90 11 4044644 4046246 CAGATCCAAAGCTCTAGCA 59 4044572 4044590 TGTTCTCCTCCTGTAGGAC 59 NA Mus musculus 50 C230029F24Rik ENSMUSG00000051616 ENSMUST00000056879 1 1 1 81 1 49367799 49392218 CGAGCATGAAGTTAGTAATGC 59 49392261 49392279 TCTTCCCATGAAGTCACAC 59 NA Mus musculus 50 D930048N14Rik ENSMUSG00000052563 ENSMUST00000064493 1 1 1 92 11 51467364 51467505 CCATCTCTAATGTTCTTTCCCT 59 51467558 51467576 CTCTAACCCAGTCCTTCCT 59 NA Mus musculus 50 Yap1 ENSMUSG00000053110 ENSMUST00000086580,ENSMUST00000065353 1 2 2 103 9 7936620 7938418 TTTCTTAACAGTGGCACCT 59 7936535 7936553 CTGTTGAGGAAGTCGTCTG 59 NA Mus musculus 50 Dspp ENSMUSG00000053268 ENSMUST00000112771,ENSMUST00000065590 2 2 2 85 5 104603926 104603944 AGTACCACTGGAAAGAGAC 58 104603993 104604165 ATAACTCATTCTGTGCTGC 57 NA Mus musculus 50 AI854703 ENSMUSG00000053297 ENSMUST00000059908 1 1 2 266 6 48579221 48579239 GATCAAGGCCTGGTTATCC 59 48579473 48579491 TGAGCAGATTCTGCTTGAG 59 NA DesignNoJunction Mus musculus 50 2310001K24Rik ENSMUSG00000053353 ENSMUST00000065731 2 1 1 85 2 163298528 163298546 CTACTGGCTGAGATCACTG 59 163298594 163298613 TAAAGAAAGCGAGAATCCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 B430305J03Rik ENSMUSG00000053706 ENSMUST00000066298 3 1 1 61 3 61168172 61168193 TTAAAGGATAGACACTTGTCCC 59 61168132 61168150 AAGTGTACGATCCTGAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr744 ENSMUSG00000053815 ENSMUST00000066457 2 1 1 60 14 51238296 51238315 CTCTACATTACCCTGCTCTC 58 51238338 51238356 CAGCAACTGATCACAAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr112 ENSMUSG00000053852 ENSMUST00000114762,ENSMUST00000066533,ENSMUST00000096431 2 3 3 90 X 54226586 54226604 GATGAAGGAAAGTGTTCGG 58 54226656 54230780 CCTAACATTTATCCAACCTGC 59 NA Mus musculus 50 Pla2r1 ENSMUSG00000054580 ENSMUST00000112525,ENSMUST00000067708 2 2 2 80 2 60271496 60279151 AACTATAAGTGCTTCCTGGTG 59 60271436 60271454 GACACAGAATTCCTGAGCA 59 NA Mus musculus 50 Sgol2 ENSMUSG00000054770 ENSMUST00000114410,ENSMUST00000068000 1 2 2 68 1 58020087 58022173 GGCTTTAACAGACTTCTGTG 58 58020038 58020056 TAGTGGAGAACCCAAACTG 58 NA DesignNoJunction Mus musculus 50 Klk15 ENSMUSG00000055193 ENSMUST00000068625 3 1 1 72 7 51193984 51194122 GAAGTCACACGTGAGACTC 59 51194158 51194176 GTTGCAAGATGCTTCAGAG 59 NA DesignRelaxed Mus musculus 50 Zfp811 ENSMUSG00000055202 ENSMUST00000080905 2 1 1 62 17 32935805 32937337 ACTAAGATGTCAACTTGTGG 57 32935762 32935780 ATCTCTGCACACTCATGAC 59 NA DesignNoJunction Mus musculus 50 1810011O10Rik ENSMUSG00000056313 ENSMUST00000052622 2 1 1 86 8 25549312 25549330 CTCGTCTCTTCGAGTAAGC 59 25549244 25549262 TTCTCAAAGATGTTGCCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000010878 ENSMUSG00000056718 ENSMUST00000071016 2 1 1 76 2 5783651 5783669 CTGATATGGCGAGTCTCAC 59 5783497 5783612 ATCATCTGTCCAATGAGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000056742 ENSMUSG00000056742 ENSMUST00000071086 1 1 1 60 18 39665559 39665577 TGGTCATCTCCTCAATGTC 58 39665517 39665535 CGGCTATGATAGAAACCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Bcl2 ENSMUSG00000057329 ENSMUST00000080103 2 1 2 75 1 108608920 108608939 GATGACTGAGTACCTGAACC 59 108439958 108608882 TAGTTCCACAAAGGCATCC 59 NA DesignNoJunction Mus musculus 50 4922502B01Rik ENSMUSG00000057387 ENSMUST00000079189 2 1 1 61 8 111774956 111774974 CAAACAACAGATACAGCGA 58 111774913 111774931 CAACGGACAAACAGTTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Krtap6-3 ENSMUSG00000057855 ENSMUST00000079151 3 1 1 119 16 89084342 89084360 AGGATACTACGGAGGTCTG 59 89084443 89084461 CAACAGCCATAACCATAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC021614 ENSMUSG00000058216 ENSMUST00000076451 2 1 1 80 19 4057992 4058101 GTATCGCCATATCCTGAAGG 59 4057931 4057949 AGGAGAGTTTCAAATGGCT 58 NA Mus musculus 50 Krt6a ENSMUSG00000058354 ENSMUST00000023788 1 1 1 237 15 101521126 101521248 AGTCAACATCTCTGTGGTG 59 101520907 101520925 GTAGCTCTTCTTGCTGGAG 59 NA DesignRelaxed Mus musculus 50 Olfr875 ENSMUSG00000058628 ENSMUST00000080634 1 1 1 63 9 37580758 37580778 CCTCATCAATCACTTCATGTG 59 37580803 37580821 GAAGGTGTTGCTACAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr58 ENSMUSG00000058659 ENSMUST00000079660 3 1 1 73 9 19587906 19587924 ATGGACAGCTTTCTACTGG 58 19587961 19587979 ACTTGGTAGTGTAGAGGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tomm20 ENSMUSG00000058779 ENSMUST00000078812 3 1 1 83 8 129460989 129461007 TGTTACAGCAGACTCTTCC 58 129458944 129460944 GAGCACTTACAATTCTCTGAC 58 NA Nonspecific Mus musculus 50 Olfr952 ENSMUSG00000058856 ENSMUST00000073895 3 1 1 61 9 39233834 39233852 TGGACCAATGGAAAGTGTC 59 39233791 39233809 CATGAGATTCAACACAGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ctf2 ENSMUSG00000060034 ENSMUST00000076091 1 1 1 102 7 134863173 134866657 AGACCTATCTCCAACACCA 59 134863089 134863107 GTCTTGAAGGAGACAGCTG 59 NA Mus musculus 50 4931433A01Rik ENSMUSG00000061298 ENSMUST00000106592,ENSMUST00000106591,ENSMUST00000097920,ENSMUST00000080744 3 4 6 94 4 110252767 110628176 TGAAAGAATTGCAGAGGGT 59 110628233 110628252 GGTAGATTTCACCATTGGTG 58 NA Mus musculus 50 Nol10 ENSMUSG00000061458 ENSMUST00000046011 3 1 1 80 12 17411791 17411809 ATTGGATCACCTTTCCTCC 58 17411851 17412053 GACCATCAATTTCACCTTGTG 59 NA Mus musculus 50 Olfr1036 ENSMUSG00000061704 ENSMUST00000081317 1 1 1 73 2 85915734 85915752 TGATTCCTATGCTGAACCC 59 85915789 85915807 AACTATCTTGCAGACTGCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tmhs ENSMUSG00000062252 ENSMUST00000080780 2 1 1 104 17 28717019 28717037 ATTGGAGATGCACTCATCC 59 28717105 28719935 TCAGACTTCCTCATTCCCA 59 NA DesignRelaxed Mus musculus 50 Dub1a ENSMUSG00000062369 ENSMUST00000076501 1 1 1 60 7 111989579 111989597 TACAGAGAAGGCAGAAGAG 57 111989537 111989555 TTGTCTACACCTACCACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Otof ENSMUSG00000062372 ENSMUST00000114747,ENSMUST00000074171 2 2 2 80 5 30697058 30697076 ACTTTGTCTTCGACTTCCA 58 30696560 30697017 GGTTCTTAGAATGGATAACCGA 59 NA Mus musculus 50 2310039H08Rik ENSMUSG00000062619 ENSMUST00000071430 3 1 1 60 17 46909635 46909653 CAGCTTCTGCACAAATAGC 59 46909676 46909695 GAGCTTAGTAACTTAGCCCA 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Hist1h2bk ENSMUSG00000062727 ENSMUST00000110455 2 1 2 208 13 22127938 22127956 CATCATGAACTCGTTCGTG 58 22128127 22128146 ATTGAGAAGTTTACTTGGCG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Hist2h3c2 ENSMUSG00000062808 ENSMUST00000105105 2 1 1 90 13 23668076 23668095 GCGTAAATTAGGGTAGTGAG 57 23668147 23668166 AGCTTATCGATATACAGCCT 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Speer2 ENSMUSG00000063163 ENSMUST00000076500 1 1 1 102 16 69859141 69860709 CAATGAACAAGAGGACCAG 58 69859057 69859075 ATCTGTAACTTGTGCAGAG 57 NA Mus musculus 50 Rpl27 ENSMUSG00000063316 ENSMUST00000077856,ENSMUST00000085947,ENSMUST00000107249 3 3 3 84 11 101306571 101306589 AACAAGGATGTGTTCAGGG 59 101306637 101306763 CTGTCTTGTATCGCTCCTC 59 NA Nonspecific Mus musculus 50 S100a7a ENSMUSG00000063767 ENSMUST00000079286 3 1 1 64 3 90459544 90459562 CTCTTGGATAGTGTGCCTC 59 90461581 90461600 TCTGTGATGTAGTATGGCTG 58 NA DesignNoJunction Mus musculus 50 Olfr319 ENSMUSG00000064044 ENSMUST00000076965 2 1 1 60 11 58515448 58515468 GGAGCTAACTTCATCTCAGAC 59 58515489 58515508 AGACTTGGATCTCACATCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-9-3 ENSMUSG00000065545 ENSMUST00000083611 3 1 1 62 7 86650176 86650194 CTAGCTGTATGAGTGCCAC 59 86650217 86650238 GAGAGTCATTTCTACTTTCGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-92a-2 ENSMUSG00000065613 ENSMUST00000083679 2 1 1 68 X 50095064 50095083 GATTGGTGGCATTACTTGTG 59 50095015 50095033 AACCCTCTTTCTTCCTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 2610044O15Rik ENSMUSG00000066057 ENSMUST00000084298 2 1 1 81 17 95160912 95163835 CCTGGTCTACAAATCTTGC 58 95160849 95160867 AAGGTAGATGAGTCCAAGC 58 NA Mus musculus 50 Mup3 ENSMUSG00000066154 ENSMUST00000107472,ENSMUST00000084531 3 2 2 106 4 61745621 61745805 CTAACCAATGTCAATCGCTG 59 61744714 61744732 ATAGGAAGGGATGATGCTG 58 NA InUTR Mus musculus 50 Lefty2 ENSMUSG00000066652 ENSMUST00000085797 1 1 1 110 1 182827704 182827723 GTTCCTGACGTATGAATGTG 58 182827796 182827814 AAGGAGGTCATCTCTGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zbtb16 ENSMUSG00000066687 ENSMUST00000093852 1 1 1 206 9 48467938 48473270 CTCACATACAGGTGACCAC 59 48465449 48465467 CAGAGTTTGCACTCAAAGG 58 NA DesignRelaxed Mus musculus 50 Olfr132 ENSMUSG00000067186 ENSMUST00000087128 1 1 1 60 17 38267650 38267668 TCTGATCCAATCTACTGCT 57 38267608 38267627 GTTATCTACTACCCGCTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr130 ENSMUSG00000067187 ENSMUST00000087129 3 1 1 78 17 38204140 38204158 GTGGTGATTTCATCCTGGT 59 38204200 38204218 TAGGAGATTAGCACCAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lce1a2 ENSMUSG00000068890 ENSMUST00000029530 2 1 1 201 3 92472869 92472887 TCTGGATGTTGTAGCAGTG 59 92472686 92472705 CTTCCTCCTGAATGGAAGTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zfp72 ENSMUSG00000069184 ENSMUST00000091481 3 1 1 81 13 74512472 74512491 TATCTGGTCACATTTCTGGA 58 74510270 74512428 TTGTTCCTGGGTATGTAGC 58 NA DesignNoJunction Mus musculus 50 Tmem100 ENSMUSG00000069763 ENSMUST00000092788 2 1 1 163 11 89895020 89895039 TAATGGACTGCCTTTCTGTG 59 89896713 89896731 TTTCTCCATTGTCACAGGT 58 NA DesignNoJunction, InUTR Mus musculus 50 Hmgb1-rs17 ENSMUSG00000070058 ENSMUST00000084171 1 1 1 72 8 34594968 34594986 CTCATATGCGCTCTTTGTG 58 34595022 34595040 GAAGTTGACAGAAGCATCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG622319 ENSMUSG00000070995 ENSMUST00000024796 1 1 1 60 6 148557133 148557151 CCAGTCATTTGCTCTTCTC 58 148557091 148557111 GTCACAATTTCAGGACATAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 NP_996891.1 ENSMUSG00000071066 ENSMUST00000072976 3 1 1 75 10 128623652 128623670 AGGGTGTGATGATTCTCAC 58 128623595 128623615 ACTTGCCTATTCCTAAGTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp817 ENSMUSG00000071291 ENSMUST00000076123 1 1 1 174 13 67595036 67595554 CATCTGGATTTCCTGGGTC 59 67593024 67593042 GAGTAAGCAGTGACTTGCA 59 NA DesignNoJunction Mus musculus 50 Gm889 ENSMUSG00000071342 ENSMUST00000095760 1 1 2 164 12 40911900 40911918 AACAAACTCAGTCTCTGCC 59 40907240 40907258 AAAGATGGCGAAGAAGACC 59 NA DesignNoJunction Mus musculus 50 Hnrpul2 ENSMUSG00000071659 ENSMUST00000096753 1 1 1 82 19 8905753 8905772 TGAACGATTCTACAGTCGAG 59 8905817 8905957 AGTAATTCTGCCAATCCCG 59 NA Mus musculus 50 1700024G13Rik ENSMUSG00000072473 ENSMUST00000100723 2 1 1 87 14 33191042 33191061 GTGATATCCAAGAGCTGGAG 59 33189784 33189802 CAGAAGGCATTTAGCACAG 58 NA DesignNoJunction Mus musculus 50 Atoh1 ENSMUSG00000073043 ENSMUST00000101351 2 1 1 90 6 64679546 64679564 AGTATCTGCTGCATTCTCC 59 64679618 64679636 CTTCTCCTTACCAGCTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG547347 ENSMUSG00000073407 ENSMUST00000097331 3 1 1 84 17 36193394 36194331 ATATGAAGAGAACAAGGGAGC 59 36194377 36194395 ATTGTTGGAGGAAGCTCAG 59 NA Nonspecific Mus musculus 50 NP_996858.1 ENSMUSG00000073812 ENSMUST00000107146,ENSMUST00000102808 2 2 3 61 4 88217357 88217375 AATGACCTCAACACTCAGC 59 88217314 88217332 TGTATCTCTACCTGCTGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073850 ENSMUSG00000073850 ENSMUST00000098069 1 1 1 60 4 55057228 55057248 ACCTACACATCTACAGTTCTC 58 55057188 55057209 AGAGGGCTTAATGTAATACAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm767 ENSMUSG00000074378 ENSMUST00000098811 1 1 1 80 7 14057545 14057564 TCAATCTGAAACACAAGTGG 58 14057607 14058314 GAGCATAGTCTGAAAGAGC 57 NA Mus musculus 50 BC029722 ENSMUSG00000074649 ENSMUST00000099160 3 1 1 83 2 155644181 155644199 AACTGCAGAAGTACACTCC 59 155644116 155644134 TATGGGAACAAAGACCAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ranbp6 ENSMUSG00000074909 ENSMUST00000099525 3 1 1 60 19 29886725 29886743 TGAATGATTCCTGCTACCA 58 29886683 29886701 TCTGCAATCTCAACAAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1313 ENSMUSG00000074946 ENSMUST00000099599 1 1 1 60 2 111912196 111912214 CTTCTACTGTGACCTTCCT 57 111912154 111912173 TTCCAGTCTATATGTGTCCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1211 ENSMUSG00000075112 ENSMUST00000099808 1 1 1 60 2 88769887 88769908 GCACTGATACTCATATCTTTGG 58 88769848 88769866 ATGATGCAGATAGACCCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1135 ENSMUSG00000075153 ENSMUST00000099853 3 1 1 60 2 87512110 87512128 ATGTAGTCGGTATGTCCAG 58 87512068 87512087 CCTACTAGGTAAACTCCAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Aldh3b2 ENSMUSG00000075296 ENSMUST00000100032 2 1 1 81 19 3980107 3980125 GCCATTGAGTTCATCAACC 59 3980170 3980707 ACATCTGATTCACCACCTG 59 NA Mus musculus 50 Nrbp2 ENSMUSG00000075590 ENSMUST00000019516 3 1 1 196 15 75918827 75918847 CTATCCACTGATGAACTTTGC 59 75917851 75917953 CCAAGAGCAGAGTAAGGTG 59 NA Mus musculus 50 IGKV17-121 ENSMUSG00000076514 ENSMUST00000103315 2 1 1 60 6 67986818 67986838 ATGTTCTCACTAGCTCTTCTC 58 67986860 67987026 CTGCCCTAGAATCAGAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-71 ENSMUSG00000076546 ENSMUST00000103347 2 1 1 128 6 69193271 69193289 TTCAACTTGGCTTCTGGAG 59 69193161 69193179 GTTACTACTCCACTGCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV4-1 ENSMUSG00000076655 ENSMUST00000103464 2 1 1 60 12 115186679 115186699 TAGATACTGGATGAGTTGGGT 59 115186639 115186659 TTCTCCAATCCATTCTAGTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV7-3 ENSMUSG00000076665 ENSMUST00000103474 3 1 1 88 12 115391503 115391521 CACAACAGAGTACAGTGCA 59 115391433 115391454 GGGCATTCATTTGAAGATAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV14-2 ENSMUSG00000076847 ENSMUST00000103659 3 1 1 68 14 54260720 54260738 CCATGGTACCATCAGTTCC 59 54260770 54260788 TTTATTGGACACTGGACGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000053270 ENSMUSG00000078251 ENSMUST00000105048 2 1 1 62 11 113331809 113331827 CAATACACAAGACGGAAGC 58 113331853 113331871 AAAGTGCCATTCCTCTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930504E06Rik ENSMUSG00000078645 ENSMUST00000015856 1 1 1 297 3 95087259 95087277 AATCCTGAAGACTCTGGGA 59 95087537 95088515 TCAAAGTTCCTCAAAGAGGT 58 NA DesignRelaxed, InUTR Mus musculus 50 Rad23b ENSMUSG00000078699 ENSMUST00000107621 2 1 1 72 4 55363917 55363935 AGTATTTGAAGGGAGGGAG 57 55363971 55363989 GTTAAGTGTAGTAGTCGGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 EG381852 ENSMUSG00000078793 ENSMUST00000108490 2 1 1 71 7 18458952 18458971 CGAGTCATGAATAGACATGG 57 18459005 18487783 CCAAAGAGATGAGTACACG 57 NA DesignRelaxed Mus musculus 50 Zfp672 ENSMUSG00000078852 ENSMUST00000064786 2 1 1 61 11 58136102 58136120 TTCTGGATCCTCTAAGCAG 58 58133445 58136077 CAACTCGTTTACCTTTGGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Ifi27 ENSMUSG00000079017 ENSMUST00000055071 1 1 1 131 12 104681714 104681847 CAACATGTTGGGAACACTG 59 104681113 104681131 ATCATCTTGGCTGCTATGG 59 NA DesignNoJunction, InUTR Mus musculus 50 A2AP89_MOUSE ENSMUSG00000079051 ENSMUST00000110318 2 1 1 164 2 128866572 128866590 CTTAGGGAGGAAATGAAGC 57 128865336 128866444 GAGCAAGACCTTCTTAGTG 57 NA Mus musculus 50 A2AP59_MOUSE ENSMUSG00000079119 ENSMUST00000110757 1 1 1 236 2 119885388 119885406 CTCAGGAGCAGATCTTGAC 59 119884868 119885097 TCACCATCCTCTCCTTCTC 59 NA DesignRelaxed Mus musculus 50 Reg3a ENSMUSG00000079516 ENSMUST00000101272 3 1 1 81 6 78332331 78333169 CATGATCCAACAATGGGTC 58 78333211 78333232 CCCAGTTAAGATAATTCAGCAC 59 NA Mus musculus 50 Sox1 ENSMUSG00000079994 ENSMUST00000116111 2 1 1 61 8 12396703 12396721 CACCCGGATTACAAGTACC 59 12396745 12396764 TACTTGTCCTTCTTGAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mapk7 ENSMUSG00000001034 ENSMUST00000079080,ENSMUST00000108714,ENSMUST00000101085,ENSMUST00000116369,ENSMUST00000094119,ENSMUST00000101086 2 6 6 82 11 61306457 61306476 AAACACGACAATATCATCGC 58 61305177 61306414 AGTACCACATAGACAGATCTG 58 NA Mus musculus 50 Ugp2 ENSMUSG00000001891 ENSMUST00000060895,ENSMUST00000102875,ENSMUST00000109575 3 3 3 82 11 21233806 21253363 CCAGAAGATTCGATTCAACC 58 21233743 21233761 ACCAACTTGTTCAACACAG 58 NA Mus musculus 50 Cugbp2 ENSMUSG00000002107 ENSMUST00000002176,ENSMUST00000114934 1 2 5 108 2 6475005 6481729 AATGCACTAGCAGGTATGG 59 6474915 6474933 GAATTCCTGAGTAGGCCTG 59 NA Nonspecific Mus musculus 50 Tiam1 ENSMUSG00000002489 ENSMUST00000114124,ENSMUST00000002588 1 2 4 105 16 89858909 89860458 ATCAACCAGGTGTTTGGAG 59 89856239 89856258 GTAAGACCACTTCCTTCTCC 59 NA Mus musculus 50 Prkar2b ENSMUSG00000002997 ENSMUST00000003079,ENSMUST00000036497 1 2 2 80 12 32657065 32660798 TTACGTCATTGACAGAGGA 57 32657003 32657022 CGGTTATCATAGTTACCGAC 57 NA Mus musculus 50 Psap ENSMUSG00000004207 ENSMUST00000105465,ENSMUST00000004316 1 2 2 159 10 59758733 59761846 CAGATGTTGATGCACATGC 59 59761969 59762221 CCAGATTCTGCTCATAGGG 59 NA Mus musculus 50 Cd44 ENSMUSG00000005087 ENSMUST00000111195 3 1 15 81 2 102693217 102693235 CCTACTGAACAGCCTACTG 59 102679611 102693173 CTGCTTCTGCTGTAATACTG 58 NA Mus musculus 50 Eif2ak4 ENSMUSG00000005102 ENSMUST00000110874,ENSMUST00000110875 3 2 8 118 2 118227071 118230798 TCTTCTAGTTCCCGAAATAGAC 59 118230876 118234097 ATATCATCACCTCTCCACAC 58 NA Mus musculus 50 Pard6a ENSMUSG00000005699 ENSMUST00000098444,ENSMUST00000093195,ENSMUST00000116431 3 3 3 187 8 108226226 108226244 CAACGATGACAGTTTGCAC 59 108226609 108226627 GCAAGCTGATTAACAAGGG 59 NA DesignNoJunction Mus musculus 50 Ndor1 ENSMUSG00000006471 ENSMUST00000114349,ENSMUST00000006640 1 2 4 96 2 25107306 25107324 CATATTCCGGAAGAGCCTG 59 25105886 25107246 CACAAAGTTGAACTTGGCA 59 NA Mus musculus 50 Ap2s1 ENSMUSG00000008036 ENSMUST00000108497 1 1 2 121 7 17328582 17328630 TATCCAGTGGTACATGCAG 58 17328715 17332625 TCTTGAAGTTCCGGAACTC 59 NA Mus musculus 50 4631426E05Rik ENSMUSG00000013611 ENSMUST00000110365 3 1 2 106 15 36447371 36447389 AGGATGACAAAGCTCACTG 59 36435215 36437459 AAATAGACTTTCTGCTGGCT 59 NA Mus musculus 50 0610007C21Rik ENSMUSG00000013622 ENSMUST00000114660 1 1 2 84 5 31351855 31354587 AGGCTAGATCTTCAGAACTG 58 31354631 31354845 CCTGAAGGTCTATGATAATAGC 57 NA Nonspecific Mus musculus 50 Rnf170 ENSMUSG00000013878 ENSMUST00000110580,ENSMUST00000014022,ENSMUST00000110577,ENSMUST00000110575 2 4 5 60 8 27234452 27236388 CTTCTCAGAAATGTACAGCAG 58 27236410 27236428 GAAGCACTCTGACTAGCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Th1l ENSMUSG00000016253 ENSMUST00000016397 1 1 2 136 2 174248161 174248508 AACTTCACTGTGAAGGTGG 59 174248608 174248626 GAGAACACTTCCAACTGCT 59 NA Mus musculus 50 Col20a1 ENSMUSG00000016356 ENSMUST00000108856,ENSMUST00000108855,ENSMUST00000080705,ENSMUST00000108854,ENSMUST00000108852,ENSMUST00000094213 1 6 7 148 2 180735953 180735971 TTCGTGATCTGATGTCTGC 59 180737068 180738063 CATCAGGTCAAACCCTGAG 59 NA InUTR Mus musculus 50 Tox4 ENSMUSG00000016831 ENSMUST00000022766,ENSMUST00000071842 1 2 2 124 14 52911883 52912202 TAGTTCCTGAGGTGGAGTC 59 52912290 52912308 CTTACTGACAACAGGAGGG 59 NA Mus musculus 50 Rbpjl ENSMUSG00000017007 ENSMUST00000109356 2 1 2 96 2 164233907 164233925 GATAAGAGGAAGCACTTCC 57 164233984 164235769 GAGATGCATACTTGATGAGG 57 NA Mus musculus 50 Pltp ENSMUSG00000017754 ENSMUST00000109317 2 1 3 119 2 164680515 164680533 CTGATATCCTCGGAACTCC 58 164678168 164680435 GTTATACATCCTCAAGAACCAG 58 NA Mus musculus 50 Ksr1 ENSMUSG00000018334 ENSMUST00000103237 2 1 5 92 11 78854427 78858349 GAAGTAAGAACTCCCTCATGG 59 78851714 78851732 GACAACCATGACTTTGTGG 58 NA InUTR Mus musculus 50 Mtmr4 ENSMUSG00000018401 ENSMUST00000103179,ENSMUST00000092802,ENSMUST00000018545 1 3 3 109 11 87410780 87411127 ATCTTCAGGTACCCTTCAC 58 87411200 87411218 TTTGAACTTGATGTGCAGC 59 NA Mus musculus 50 Cd68 ENSMUSG00000018774 ENSMUST00000018918,ENSMUST00000108654 3 2 2 119 11 69478604 69478756 TCAAACAGGACCTACATCAG 59 69478391 69478409 GAAGAGATGAATTCTGCGC 58 NA Mus musculus 50 Esr1 ENSMUSG00000019768 ENSMUST00000105590,ENSMUST00000067086,ENSMUST00000105589 1 3 4 86 10 5407248 5407266 TGATGATTGGTCTCGTCTG 59 5377372 5407198 TACCTTGATTCCTGTCCAG 58 NA Mus musculus 50 Syne1 ENSMUSG00000019769 ENSMUST00000056571,ENSMUST00000095899,ENSMUST00000092721 1 3 5 80 10 5305072 5305576 AGACAGCTGGTGTAATTGAC 59 5305619 5305637 GAAGGTTCTGCTTCATCCT 59 NA Mus musculus 50 Rgs17 ENSMUSG00000019775 ENSMUST00000064225,ENSMUST00000019909 2 2 2 61 10 4505249 4505269 TCTATACTGTCACCGAAAGAG 58 4513422 4513440 CTCCTGTTGATCACCTCTC 59 NA DesignNoJunction Mus musculus 50 Mknk2 ENSMUSG00000020190 ENSMUST00000003433,ENSMUST00000072616,ENSMUST00000105337 1 3 4 80 10 80134389 80134488 GTTCGAAGATGTCTATCAGCT 59 80134329 80134348 ATGAGATTGACACAGGTCTG 59 NA Mus musculus 50 Mpg ENSMUSG00000020287 ENSMUST00000020528 1 1 1 60 11 32130026 32130045 TACTTCTGCTTGAATGTCTC 57 32131588 32131606 CTAGTGCTCTTAGCAAGAC 57 NA DesignNoJunction Mus musculus 50 Theg ENSMUSG00000020317 ENSMUST00000077433 2 1 2 171 10 79049545 79049563 TCTTCAACAAGACCTGGAG 58 79048187 79048982 GTATACAGAAGGCCTGTCTC 59 NA Mus musculus 50 Med7 ENSMUSG00000020397 ENSMUST00000020665,ENSMUST00000109232 2 2 2 180 11 46250511 46253325 GGATCATCTGTCCCTATCG 58 46253466 46254074 AATCAAGAACCTAAGACCAGAG 59 NA InUTR Mus musculus 50 Helz ENSMUSG00000020721 ENSMUST00000100305,ENSMUST00000106746 1 2 3 91 11 107487946 107487964 CTCATCATTGGACCCTACG 59 107488019 107488675 ATGAGAATCCTGGTCTCCT 59 NA Mus musculus 50 0610010K14Rik ENSMUSG00000020831 ENSMUST00000021180,ENSMUST00000108578,ENSMUST00000100950,ENSMUST00000021181 1 4 9 94 11 70050443 70050461 GAGATAGAGATGCTGAGGG 58 70049702 70050385 TTTATCTGAGCCACTGTCC 58 NA Nonspecific Mus musculus 50 Coro6 ENSMUSG00000020836 ENSMUST00000102493,ENSMUST00000108390,ENSMUST00000052515,ENSMUST00000108391 1 4 6 80 11 77281304 77281322 GGCTGGGTCATATCTTCAC 59 77281366 77281780 CTTCGAAATTGTTCGGGTC 59 NA Mus musculus 50 Pitrm1 ENSMUSG00000021193 ENSMUST00000021611 3 1 2 82 13 6558719 6559285 CCTGATGTTGGATATAATGGC 58 6559328 6559347 GTCTTGACATCTTTCTCTGC 58 NA Mus musculus 50 Ylpm1 ENSMUSG00000021244 ENSMUST00000101202 1 1 2 100 12 86356453 86356471 TCATTGCAGCTAAGGACAC 59 86356534 86374876 TTTCTGTTCTCTTGGACCTC 59 NA Mus musculus 50 Myst4 ENSMUSG00000021767 ENSMUST00000069648,ENSMUST00000096222,ENSMUST00000112458 2 3 3 60 14 22336254 22336272 TTAGTGTTCAGGATGGCTC 58 22336295 22336314 TCCTTATATGAAGCAAGGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slmap ENSMUSG00000021870 ENSMUST00000112331,ENSMUST00000090359 3 2 7 115 14 27262115 27273036 CTAGAGTGCCAGAAGAAGC 59 27258472 27258491 AGAGTGTCTGATAAGTCGGA 59 NA Mus musculus 50 Nek4 ENSMUSG00000021918 ENSMUST00000050171 2 1 2 81 14 31787531 31788413 GTACAAAGAGCCAGTTCCA 59 31788455 31788476 GTTGCTATGATATCCACTTTCC 58 NA Mus musculus 50 Uchl3 ENSMUSG00000022111 ENSMUST00000002289,ENSMUST00000066470 1 2 2 90 14 102065874 102066215 AGATGCACTTCGAATCAGG 59 102066269 102066287 TTCTCCAGGAATTTGGCTC 59 NA Mus musculus 50 Brd1 ENSMUSG00000022387 ENSMUST00000109381,ENSMUST00000023022 3 2 4 123 15 88537556 88537574 TTCTCCGAAACAAGCTGAG 59 88531688 88537469 GGAGAGTTAGCTCCTTCCT 59 NA Mus musculus 50 Ccdc80 ENSMUSG00000022665 ENSMUST00000099498,ENSMUST00000061050 3 2 2 81 16 45116426 45116446 GAGGAAGGAGTATGGAATGAC 59 45116486 45118225 TTCGTAGTATTGCTTGACTCTC 59 NA Mus musculus 50 Htf9c ENSMUSG00000022721 ENSMUST00000115640,ENSMUST00000100099,ENSMUST00000014843 3 3 4 118 16 18252819 18252838 CAATGTTGAGTTCCACTGTG 59 18252919 18253025 CCTTAGAATGTAGGCCAGC 59 NA Mus musculus 50 Ccdc116 ENSMUSG00000022768 ENSMUST00000023452,ENSMUST00000115709 1 2 3 122 16 17144137 17144155 CTCAGGATATCTGGCTGAC 58 17142902 17142920 GATGGTAGGTGTGGTACAC 59 NA DesignNoJunction Mus musculus 50 Eif4a2 ENSMUSG00000022884 ENSMUST00000115341,ENSMUST00000023599 3 2 3 87 16 23111962 23113250 ATTCACAGAATTGGCAGAG 57 23113301 23113319 CACGAAGAATCCTCTTGTC 57 NA Mus musculus 50 Masp1 ENSMUSG00000022887 ENSMUST00000023605,ENSMUST00000089883 3 2 2 80 16 23494822 23496167 ACTACATGGCTGTAGATGTG 59 23494761 23494780 TGTAGTTGTGACAGTAGTGG 58 NA Mus musculus 50 Ifnar2 ENSMUSG00000022971 ENSMUST00000023693,ENSMUST00000089042 1 2 2 86 16 91386301 91388197 CAGTCATGAGCAAAGACGA 59 91388247 91388265 ACCACTTATCTGTCACGTC 59 NA Mus musculus 50 Cenpq ENSMUSG00000023919 ENSMUST00000087114,ENSMUST00000087113 3 2 2 85 17 41070030 41070048 GGATTTGCCAGAGAATGAG 58 41068714 41069753 CTTGTCCTGTTACTTTAGAGG 57 NA Mus musculus 50 Brd2 ENSMUSG00000024335 ENSMUST00000095347,ENSMUST00000025193,ENSMUST00000114242,ENSMUST00000114241 2 4 4 106 17 34250420 34250526 AAGTAGCAACAAGCTACCT 58 34250332 34250350 CATCATAACTCATGGGCCT 59 NA Mus musculus 50 Zdhhc6 ENSMUSG00000024982 ENSMUST00000111683,ENSMUST00000111682,ENSMUST00000111680,ENSMUST00000076891,ENSMUST00000111679 1 5 5 157 19 55379029 55379048 ATTACCAACTGGATGAAGTC 57 55378220 55378909 CTGTTCTATTGTGAGGCTG 57 NA Mus musculus 50 Hdgfrp3 ENSMUSG00000025104 ENSMUST00000107305,ENSMUST00000107306,ENSMUST00000026094 3 3 3 82 7 89038827 89044574 TCCTACACGTCAAAGAAGTC 59 89038764 89038783 TTCTCCTCTTCTTTGCAGTC 59 NA Mus musculus 50 Aatk ENSMUSG00000025375 ENSMUST00000064307,ENSMUST00000103020,ENSMUST00000103019 3 3 3 80 11 119873734 119874049 TATCTGATCGATGGTACGAG 58 119873673 119873691 GTAGATGAACCTCTTCAGC 57 NA Mus musculus 50 Irf7 ENSMUSG00000025498 ENSMUST00000026571,ENSMUST00000097952 3 2 2 68 7 148450646 148450664 ATAGGGAAGAAGTGAGCCT 59 148450527 148450545 TTGCCAGAAATGATCCTGG 59 NA DesignNoJunction Mus musculus 50 Dock9 ENSMUSG00000025558 ENSMUST00000100298,ENSMUST00000040700 1 2 3 135 14 121976643 121977391 ATCTCACACGGAAAGAAGC 59 121975199 121975217 GGTGTGATAACCCTGAAGG 59 NA Mus musculus 50 5230400G24Rik ENSMUSG00000026150 ENSMUST00000078332 2 1 3 80 1 82732071 82738400 AAACGATTCCATTGTGACAC 59 82738442 82738461 AGATTAGCTCCATCTTCAGG 58 NA Mus musculus 50 Epha4 ENSMUSG00000026235 ENSMUST00000113540 2 1 2 96 1 77379513 77379531 GGTAAACAGCAACTTGGTC 58 77374174 77379453 TTTGATCACCCTGGTAGTG 58 NA Mus musculus 50 Ccdc93 ENSMUSG00000026339 ENSMUST00000112620,ENSMUST00000036025,ENSMUST00000112621 3 3 4 82 1 123342249 123342268 AGAGATGGGAGACTACATCC 59 123342311 123344816 TTATGAAGTCATCATCCTCCG 59 NA Mus musculus 50 Niban ENSMUSG00000026483 ENSMUST00000097541 2 1 2 101 1 153561708 153561726 CATCTCTGCACAGGATGAG 59 153561789 153562806 TCATATTTCTGAAGCTCCTCC 59 NA Mus musculus 50 4921504E06Rik ENSMUSG00000026734 ENSMUST00000062060 1 1 2 87 2 19397323 19397341 CAAATGTTCCTCATCCACC 58 19384798 19397188 CTAGAATCCGAGGTGACTC 58 NA Mus musculus 50 Acbd5 ENSMUSG00000026781 ENSMUST00000028121,ENSMUST00000114526 3 2 3 144 2 22950030 22955097 AGGGAGAGGGAATAGAATACC 59 22955201 22955221 CAATCTAATGAGCACAAGAGC 59 NA Mus musculus 50 Ralgds ENSMUSG00000026821 ENSMUST00000113894,ENSMUST00000028170,ENSMUST00000113893,ENSMUST00000100241,ENSMUST00000113892 2 5 5 80 2 28403130 28403641 ACTATCTCTATGGGAGACTG 57 28403922 28403940 ACTGTAGCAACTTGATCTG 57 NA Mus musculus 50 Rab14 ENSMUSG00000026878 ENSMUST00000113025,ENSMUST00000028238 2 2 2 106 2 35045499 35045517 CAGATTTGGGATACAGCAG 57 35042252 35045430 GTACTTCTTCTGGTGATGTC 57 NA Mus musculus 50 Arrdc1 ENSMUSG00000026972 ENSMUST00000028349,ENSMUST00000114414 1 2 4 161 2 24782192 24782210 ATAAGCTGGTGAAGACTGG 58 24781953 24782071 CCTTATAGGATACCTTCTGTAGC 59 NA Mus musculus 50 Baz2b ENSMUSG00000026987 ENSMUST00000112548 2 1 4 102 2 59770218 59771477 CTAGATATGGAACGGGAGC 59 59764190 59764209 GTTTCTCTTGCTTCAATCGT 58 NA Mus musculus 50 Dync1i2 ENSMUSG00000027012 ENSMUST00000112142,ENSMUST00000112140,ENSMUST00000112144,ENSMUST00000100028,ENSMUST00000112136 1 5 8 157 2 71066665 71066683 CCTATGTCTCCATCCTCCA 59 71071762 71073986 TTAATAGGTCCTCGTCCCA 59 NA Mus musculus 50 Clp1 ENSMUSG00000027079 ENSMUST00000028475 3 1 1 123 2 84565756 84565776 AGATGTGGAAGAAGGTTTCTC 59 84564342 84564360 TTGGTTGAACACATCTGCT 59 NA DesignNoJunction Mus musculus 50 Tfpi ENSMUSG00000027082 ENSMUST00000111722,ENSMUST00000111711 3 2 8 87 2 84284270 84284909 TGTGAGAATCCAGTGAATGAG 59 84284203 84284224 CGATGTTATTTACAGTACTGCG 59 NA Mus musculus 50 2700007P21Rik ENSMUSG00000027122 ENSMUST00000028536,ENSMUST00000093883 3 2 3 80 2 106809274 106809294 CAGATCATCAATGGAAGTGTG 59 106807370 106809233 TTTAGCAGTCCTTCCATCTG 59 NA Mus musculus 50 Slc12a6 ENSMUSG00000027130 ENSMUST00000028549,ENSMUST00000110991,ENSMUST00000053666 2 3 4 90 2 112198094 112198666 TACTTAATATGCGTCCGGAC 59 112198718 112198737 GCTTCATGAGACTTGTTGAC 59 NA Mus musculus 50 Ltk ENSMUSG00000027297 ENSMUST00000028759,ENSMUST00000082130 3 2 2 92 2 119578490 119578508 TAACTGTCTGCTTAGCTGC 59 119578320 119578434 CGATAATAACTGGCCTGGT 59 NA Mus musculus 50 Prnd ENSMUSG00000027338 ENSMUST00000110169,ENSMUST00000110171,ENSMUST00000110170 1 3 6 87 2 131779266 131779285 GTTTCGTTTGGTTCATTGTG 58 131780573 131780591 TTATTTCCAGATCCCGCTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Spred1 ENSMUSG00000027351 ENSMUST00000028829,ENSMUST00000110901 2 2 2 80 2 116989392 116990690 TATATCTCTAGGGTGCCCAG 59 116997664 116997683 GAAGTGTCTTCTTCAGTCGT 59 NA Mus musculus 50 Usp50 ENSMUSG00000027364 ENSMUST00000028842 1 1 2 80 2 126595651 126595672 GACCTCACTCCTTATATCTGTC 59 126587413 126595610 ATCTCCAAAGTGGTTCACC 59 NA Mus musculus 50 Sec23b ENSMUSG00000027429 ENSMUST00000028916,ENSMUST00000099288 2 2 2 80 2 144385111 144385131 CTCCTGTACAGTATGAACCTG 59 144385171 144387881 GGTAATCCACTTGACAAAGTG 59 NA Mus musculus 50 Necab3 ENSMUSG00000027489 ENSMUST00000080908 1 1 3 176 2 154380650 154382793 GGTGAGTGCAATTTAGAGAC 58 154373253 154373271 AAATCGTGTGACAAACTGG 58 NA Mus musculus 50 Zbp1 ENSMUSG00000027514 ENSMUST00000029018 1 1 2 80 2 173034577 173034595 CACCTTAGGTCAAAGGGTG 59 173033407 173034533 TTCAGAGCTTGTACCTGTG 59 NA Mus musculus 50 Dapp1 ENSMUSG00000028159 ENSMUST00000029806,ENSMUST00000098582 3 2 2 90 3 137600780 137602112 AAAGACCAGATGTCACCAG 59 137600708 137600727 AGTTTACTCGTTCCTGTGAG 59 NA Mus musculus 50 Invs ENSMUSG00000028344 ENSMUST00000030029,ENSMUST00000107715,ENSMUST00000107713,ENSMUST00000107710 3 4 5 105 4 48415798 48420475 AACAATGAGGAGAGGTACAC 59 48420543 48420561 GTATAGCTGCGATGGACAG 59 NA Mus musculus 50 Aptx ENSMUSG00000028411 ENSMUST00000108104,ENSMUST00000068125,ENSMUST00000030119 1 3 4 106 4 40642165 40642423 TCAAAGTACAGCAGATGGG 59 40642077 40642095 ATTCACCATGTGGAGAACC 59 NA Mus musculus 50 Pla2g2e ENSMUSG00000028751 ENSMUST00000030531,ENSMUST00000105803,ENSMUST00000105804 3 3 3 102 4 138436673 138436691 CGAGACAACATCTTCTGTG 58 138438395 138438413 TGTAAGTGTTCAGGTTGTG 57 NA DesignNoJunction Mus musculus 50 2510006D16Rik ENSMUSG00000028797 ENSMUST00000102591 1 1 2 129 4 129278370 129279449 AATACTGAGTACCTGATGCC 58 129284366 129284384 TCAGTGTAAAGACGATGGC 59 NA Mus musculus 50 Eya3 ENSMUSG00000028886 ENSMUST00000105928 3 1 6 85 4 132236733 132236751 CACAGTGTTCTTACCTGCA 59 132236800 132245629 GTGCTTGAAGCTTGAATGG 59 NA Mus musculus 50 Clcn6 ENSMUSG00000029016 ENSMUST00000105711,ENSMUST00000030879 1 2 3 80 4 147392063 147392081 CTCTGGGATTCAGTTTGGA 58 147391761 147392022 GAGTCAGAGCACTTAAATTCAC 59 NA Mus musculus 50 Cdc2l1 ENSMUSG00000029062 ENSMUST00000067081,ENSMUST00000105600,ENSMUST00000105598,ENSMUST00000105599 1 4 4 80 4 155013727 155013745 GAGACTTGTTGTCAGACCT 58 155013788 155013894 CTGATTCTGCTGATGAAGAC 58 NA Mus musculus 50 Nsun7 ENSMUSG00000029206 ENSMUST00000031109 1 1 3 85 5 66687077 66687095 TATTCCCATTGAGTTCCCA 57 66687144 66689070 GCAGAATCTCTTTGATCCA 57 NA Mus musculus 50 Tec ENSMUSG00000029217 ENSMUST00000071944,ENSMUST00000113594,ENSMUST00000113593 3 3 4 96 5 73173310 73173329 CACATGACCTCAGGTTAGAG 59 73170717 73173254 CCTTCACTCCCATACTTATCTC 59 NA Mus musculus 50 P2rx4 ENSMUSG00000029470 ENSMUST00000081554 3 1 3 175 5 123168517 123168535 ATAAGACCAGCATTTGCGA 59 123169230 123175011 GAGGATATTCCTCGTTGGC 59 NA Mus musculus 50 Sppl3 ENSMUSG00000029550 ENSMUST00000031530,ENSMUST00000112134 2 2 2 81 5 115545956 115547145 TACCTAAAGGGTGACTTACG 58 115547189 115547207 ATCATACTTCCAGGAACCG 58 NA Mus musculus 50 Rad18 ENSMUSG00000030254 ENSMUST00000068487 3 1 3 208 6 112599607 112599625 GATGAACCTGCAGAAACAC 59 112578507 112594589 TCTGAACTGGAACTATTGCA 58 NA DesignRelaxed Mus musculus 50 Ercc2 ENSMUSG00000030400 ENSMUST00000062831 3 1 2 101 7 19969503 19969663 TTGAGAAGGTCATAGAAGAGC 59 19969726 19969744 TCTTTCTTGAGCTCAGAGC 59 NA Mus musculus 50 Gas2 ENSMUSG00000030498 ENSMUST00000107592,ENSMUST00000051912,ENSMUST00000107591 2 3 3 90 7 59208658 59248665 TCCTCTTCATCAGGATGCT 59 59248719 59248737 TCATGCTTGAGCAGATAGC 59 NA Mus musculus 50 Chrna7 ENSMUSG00000030525 ENSMUST00000032738 2 1 2 80 7 70255332 70255350 CTTTGATGCCACATTCCAC 59 70252593 70255289 CTCTTGAATATGCCTGGAGG 59 NA Mus musculus 50 Slc5a11 ENSMUSG00000030769 ENSMUST00000033035,ENSMUST00000098061 1 2 2 81 7 130404090 130404108 TACCTGAAAGTGCTTCCTC 58 130404153 130408717 CACAGGCTACTTGATCTGG 59 NA Mus musculus 50 Ush1c ENSMUSG00000030838 ENSMUST00000107683 3 1 4 146 7 53452567 53452586 TAAGGAGTATGATGACGAGC 58 53451096 53452083 AAGAAGGTTCTAGTCACCG 58 NA Mus musculus 50 Fgfr2 ENSMUSG00000030849 ENSMUST00000033138 2 1 4 81 7 137385943 137385961 GGCCTCTATGCTTGTACTG 59 137384780 137385898 ATGAGATGGCATCTGTGAC 59 NA Mus musculus 50 Fgfr2 ENSMUSG00000030849 ENSMUST00000068807 1 1 4 135 7 137372301 137405275 TTAGAACCAGAAGGAGCAC 58 137372184 137372202 TTAACCACCTCATTGTGGG 59 NA Mus musculus 50 Dhx32 ENSMUSG00000030986 ENSMUST00000033290,ENSMUST00000063669 2 2 2 279 7 140951137 140951155 CTTCATGGAGAGTCTGCTG 59 140934472 140940532 ATCAGTACAGTACCTCAGGA 59 NA DesignRelaxed Mus musculus 50 Cask ENSMUSG00000031012 ENSMUST00000116623,ENSMUST00000115438,ENSMUST00000115432 2 3 9 149 X 13128102 13129510 AATTCTGTTTCGGACTTGC 58 13126386 13126404 AATCTGGATGATGTCACCA 58 NA Mus musculus 50 Serpina7 ENSMUSG00000031271 ENSMUST00000060824,ENSMUST00000033626 1 2 2 80 X 135616538 135616556 ATGGAATGGGTAGAAGCAG 59 135615881 135616496 CAATTCAACCCATCCTTTCTG 59 NA Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112404 3 1 10 121 X 156876232 156899279 TACATCCCTGAAAGATGCT 57 156903518 156903536 TGCAGATATTTCTCTGGGA 57 NA Mus musculus 50 Nlgn3 ENSMUSG00000031302 ENSMUST00000113671 2 1 2 80 X 98497700 98497718 CGTCGCCACTTATATCCAG 59 98497762 98498420 ATCCGCTTTACATCTTCCG 59 NA Mus musculus 50 Morf4l2 ENSMUSG00000031422 ENSMUST00000080411 3 1 4 120 X 133274431 133275764 TGGATTCTCGTTTCAGGTC 59 133270147 133274347 AAGTGGGAATACAACCCTG 59 NA InUTR Mus musculus 50 Mtmr2 ENSMUSG00000031918 ENSMUST00000115652,ENSMUST00000034396 2 2 3 81 9 13590364 13593035 AGATATGGCCAAAGATGTG 57 13593079 13593098 TAACCTGTAACTTGTGACAG 57 NA Mus musculus 50 Oaf ENSMUSG00000032014 ENSMUST00000034512 1 1 1 92 9 43031986 43032004 GATGTCCAGTTCTGGACAG 59 43030855 43030873 TCCACAACGAGGTAATTCC 59 NA DesignNoJunction Mus musculus 50 Tcf12 ENSMUSG00000032228 ENSMUST00000034755,ENSMUST00000113549 3 2 3 80 9 71770506 71770527 GAACACCATACTACTCATTCTC 58 71764853 71770466 CTTGTAAAGGATCTAGGGCT 58 NA Mus musculus 50 AI118078 ENSMUSG00000032313 ENSMUST00000034862 3 1 2 90 9 55228665 55245556 AAAGAGAAGGGTCTGACTG 58 55245610 55245628 AAACTGTTGAGACTTGCAC 58 NA Mus musculus 50 Impg1 ENSMUSG00000032343 ENSMUST00000113250 2 1 2 80 9 80334306 80334324 CATCTGTCCACAGGAATCC 59 80329057 80334264 ACGACTTCTTGACATACTCTC 59 NA Mus musculus 50 Dhx30 ENSMUSG00000032480 ENSMUST00000035056,ENSMUST00000111991,ENSMUST00000062368 1 3 4 80 9 109987507 109987525 GTTCAAACCCAACAGTGTC 59 109987364 109987463 GTAGCCTCCCTGTTAATGG 59 NA Mus musculus 50 Ppp1r9a ENSMUSG00000032827 ENSMUST00000035813,ENSMUST00000065842 1 2 2 99 6 5065125 5065145 CGATTTCATCAAGAGACAGGA 59 5065204 5065317 ATCTCTAATCCGAACTTGCAG 59 NA Mus musculus 50 Cobll1 ENSMUSG00000034903 ENSMUST00000112431,ENSMUST00000112430,ENSMUST00000090896,ENSMUST00000072921,ENSMUST00000112422,ENSMUST00000112432 3 6 9 80 2 64940177 64940197 ATATAGGCAATGAGGACAGAG 58 64937441 64940136 TTTGAACTACACTCTCCTGG 58 NA Nonspecific Mus musculus 50 Lrfn5 ENSMUSG00000035653 ENSMUST00000047317 2 1 2 105 12 62944959 62944978 TCCTGATTCTGTTACAGAGG 58 62952013 62953149 GGAAAGCTTCTGTGTTTCC 58 NA Mus musculus 50 Snapc4 ENSMUSG00000036281 ENSMUST00000114115,ENSMUST00000035427 2 2 3 80 2 26230080 26230176 ATTCAGGACATCAACCAGC 59 26230018 26230038 ATTGGAAATCTTCTCCCAGTC 59 NA Mus musculus 50 Gng12 ENSMUSG00000036402 ENSMUST00000043148,ENSMUST00000114228,ENSMUST00000114227,ENSMUST00000114226,ENSMUST00000114225,ENSMUST00000114224,ENSMUST00000114222 3 7 7 125 6 66965821 66967462 CCATCGAAAGAATAAAGGTCTC 58 66967547 66967566 TCTTCTTATCCTTGAACGGG 59 NA Mus musculus 50 Pml ENSMUSG00000036986 ENSMUST00000085673,ENSMUST00000114136,ENSMUST00000041209 2 3 3 93 9 58082730 58094789 CTGACTGACATCTACTGCC 59 58082655 58082674 CAATATCGCAATGGAGATGG 58 NA Mus musculus 50 Ankrd13b ENSMUSG00000037907 ENSMUST00000092892,ENSMUST00000037593 1 2 2 94 11 77287135 77288032 AGTCAAAGGTTGTAAGACAC 57 77286892 77286910 TCAGAGTCTGAGTGATCAG 57 NA Mus musculus 50 Dock10 ENSMUSG00000038608 ENSMUST00000077946 1 1 3 135 1 80525230 80525248 ATTGCAGAATACCTGAAGC 57 80522894 80524814 TAGAGAACATGCTTCCTCC 58 NA Mus musculus 50 Trps1 ENSMUSG00000038679 ENSMUST00000077935,ENSMUST00000079553,ENSMUST00000090037 1 3 4 80 15 50663495 50677568 GATGTACAGGTCACTTCAG 57 50663433 50663451 GAAATACTTGGTGTTGCCT 57 NA Mus musculus 50 Mapkap1 ENSMUSG00000038696 ENSMUST00000113129,ENSMUST00000113124 1 2 5 80 2 34389409 34436721 AAATTTCAGGTTCAAGGGC 58 34436763 34436783 TGCTAAGCATATCCTGTACTG 59 NA Mus musculus 50 Pbx3 ENSMUSG00000038718 ENSMUST00000113132,ENSMUST00000113131 2 2 4 111 2 34033781 34033799 GAGGCCAATCTCTATGCTG 59 34031466 34033706 GGTATCCACCAGAGTTTGG 59 NA Mus musculus 50 Ccdc68 ENSMUSG00000038903 ENSMUST00000043929 3 1 2 98 18 70120074 70120092 GAGATTTCCATCCTCCAGG 59 70120154 70121125 TAGTCCTTCCATCTCCTGG 59 NA Mus musculus 50 Slco4a1 ENSMUSG00000038963 ENSMUST00000038259,ENSMUST00000038225 3 2 2 81 2 180199526 180200314 CTATATCGCCATCTTCTACAC 57 180200357 180200375 GTAAACGTTTAGCATGGCT 58 NA Mus musculus 50 Rreb1 ENSMUSG00000039087 ENSMUST00000110238,ENSMUST00000110236,ENSMUST00000110237,ENSMUST00000037232 3 4 5 121 13 37984421 37984442 CATAAAGGAGTGATATCCAGAG 57 37984523 37985655 GTCTCTGCTATAGAACTCCA 57 NA InUTR Mus musculus 50 Whrn ENSMUSG00000039137 ENSMUST00000102867,ENSMUST00000107393,ENSMUST00000084510,ENSMUST00000063650,ENSMUST00000107391,ENSMUST00000095038,ENSMUST00000107388,ENSMUST00000095037,ENSMUST00000107386 3 9 11 81 4 63080504 63080522 ATTAGACCTGGAAGGAACC 58 63079642 63080460 GGATTTGACATCATCCACAG 58 NA Mus musculus 50 Srrm2 ENSMUSG00000039218 ENSMUST00000090276,ENSMUST00000088621,ENSMUST00000073292 1 3 3 89 17 23949514 23949532 TACAACAACCTAGTAGCCC 58 23949585 23952104 GTCGAACTGCAGATTTCTC 58 NA Mus musculus 50 AA536717 ENSMUSG00000039599 ENSMUST00000116507,ENSMUST00000051915 2 2 5 92 14 21177280 21177298 GGCTATGGATTGTACCCTC 59 21177354 21182494 TCCCTCTTCCATGGTAGAC 59 NA Mus musculus 50 Plekhg5 ENSMUSG00000039713 ENSMUST00000105662,ENSMUST00000084115,ENSMUST00000105661 3 3 3 102 4 151486533 151486631 ATTTACAACGCACAGAACC 58 151486697 151486715 CATCTTCCTCCTCTTCCAG 58 NA Nonspecific Mus musculus 50 Fkbp6 ENSMUSG00000040013 ENSMUST00000044972,ENSMUST00000111182,ENSMUST00000111181 2 3 3 96 5 135823825 135825495 TGTGCTGGTGAAATATTCTG 58 135823748 135823766 TTCTCCAAGTTTCATCAGC 57 NA Mus musculus 50 Pitpnc1 ENSMUSG00000040430 ENSMUST00000103064 1 1 3 96 11 107095664 107095682 AGTGGAACAATTTGTGCAC 59 107078100 107087554 CATTGTCATATCGTACCACTC 58 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000099723,ENSMUST00000111369,ENSMUST00000111373 1 3 17 86 2 90998620 90998638 ATCAAGACTCTGTCATCGG 58 90998288 90998570 AACTATTACTCACGGTGCT 58 NA Mus musculus 50 Slc25a34 ENSMUSG00000040740 ENSMUST00000038661 1 1 1 124 4 141178169 141178187 GTCACAGTAGGTTCAGCTG 59 141177372 141177390 ATACTGCTGATCATGCCAC 59 NA DesignNoJunction Mus musculus 50 Arhgef1 ENSMUSG00000040940 ENSMUST00000098683,ENSMUST00000047873 3 2 4 180 7 25710496 25710811 CCTTCAGAAAGTACTGTCCC 59 25710954 25711048 CAACTCCTCCAGTTGTCTG 59 NA Mus musculus 50 Mill2 ENSMUSG00000040987 ENSMUST00000072386,ENSMUST00000072415 3 2 2 62 7 19443739 19443757 ACCATAGCATCATGCAGAC 59 19443887 19443905 TAGCAACATCCTGACTGTC 58 NA DesignNoJunction Mus musculus 50 Git2 ENSMUSG00000041890 ENSMUST00000102579,ENSMUST00000112185,ENSMUST00000043283,ENSMUST00000112183 1 4 5 86 5 115195494 115195512 CCAGACTATGACAGTGTGG 59 115189279 115195444 GAGAGTTTGAAGCTTCTGC 58 NA Mus musculus 50 Metapl1 ENSMUSG00000041921 ENSMUST00000037210 1 1 3 80 2 71360677 71361866 TTGGCATCATGCAAATGAC 59 71362776 71362795 GAACCTTCAGTGATGATTGG 58 NA Mus musculus 50 4833418A01Rik ENSMUSG00000041966 ENSMUST00000064155,ENSMUST00000112167,ENSMUST00000102701,ENSMUST00000064141 2 4 6 88 2 70916628 70919977 AAATCACAGACTCACCACC 59 70920029 70920047 GATGATGTAGTGCCAAGGA 59 NA Mus musculus 50 Shc1 ENSMUSG00000042626 ENSMUST00000107417,ENSMUST00000039110,ENSMUST00000094378 2 3 3 82 3 89227672 89227690 TGGAATGCCAATCACTCTC 59 89227736 89228127 GATGGTTGGCAATGATCTG 58 NA Mus musculus 50 Casc1 ENSMUSG00000043541 ENSMUST00000111728,ENSMUST00000111727,ENSMUST00000060797,ENSMUST00000057366 3 4 4 82 6 145145389 145145407 CATTAGCCTGTGGGAAGAG 59 145143149 145145343 TTTCAATCAACGACAGCAC 58 NA Mus musculus 50 Thrap3 ENSMUSG00000043962 ENSMUST00000106142 3 1 3 106 4 125850763 125852591 AGAGATACACAGGAGGATAGAC 59 125850678 125850696 AACAGTTCACCTTGTAGCC 59 NA Mus musculus 50 Als2cl ENSMUSG00000044037 ENSMUST00000084927,ENSMUST00000084926,ENSMUST00000111897,ENSMUST00000111896 1 4 4 80 9 110800272 110800290 GGGCTGCAAATACAAACTG 59 110800334 110800564 AGATGCTGAATTCGAGCTC 59 NA Mus musculus 50 BC023882 ENSMUSG00000045102 ENSMUST00000042954 2 1 3 122 5 34367079 34375405 CTATGGAGCTGGGAAAGAG 59 34366975 34366994 ATAACTGTCTGGGCAAAGTC 59 NA Mus musculus 50 Hcrt ENSMUSG00000045471 ENSMUST00000107360,ENSMUST00000055083 3 2 2 146 11 100623471 100624144 TTCTACAAAGGTTCCCTGG 58 100623343 100623361 TGCAACAGTTCGTAGAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rbm12b ENSMUSG00000046667 ENSMUST00000050069,ENSMUST00000069128 3 2 2 85 4 12070570 12070589 ACAGAATAAACAGGTCTCCA 58 12071179 12071197 TAAACGGATGACTACAGCC 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 C87436 ENSMUSG00000046679 ENSMUST00000050497,ENSMUST00000113700 2 2 3 95 6 86396180 86396199 TTTCTTTGCTTGTCTCTGTG 58 86396257 86397317 ATCTCCTTAAGACCACTGG 57 NA Mus musculus 50 Fgfbp3 ENSMUSG00000047632 ENSMUST00000057337,ENSMUST00000112415 2 2 2 122 19 36993114 36993132 TGCTAGTGAAGTCCAACTC 58 36993010 36993028 AGTAGGTCTCAGTGAGCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr26 ENSMUSG00000047667 ENSMUST00000058789 2 1 1 60 9 38662685 38662705 GTCTTGGTGGAATTAACACAG 59 38662727 38662745 CCAGGAACAGAATGAAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 4930533K18Rik ENSMUSG00000047692 ENSMUST00000058942 2 1 1 91 10 70334923 70334941 CTCAAGCCCAACTTAACCT 59 70334995 70337989 ATTTCTGTGGGAGAAGTGTG 59 NA Mus musculus 50 D19Wsu162e ENSMUSG00000047731 ENSMUST00000099376,ENSMUST00000111856,ENSMUST00000059990,ENSMUST00000111855 3 4 4 84 19 46727068 46727086 ATCAACCTGATCGCTTACC 59 46728463 46728481 GAGGTAGCAAAGAGTTTGG 58 NA DesignNoJunction Mus musculus 50 BC048609 ENSMUSG00000047733 ENSMUST00000061460 1 1 1 60 19 6080220 6080238 CTTCATACACATGGGTGTC 57 6080262 6080280 GTAGTTGTGGATGACACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc88b ENSMUSG00000047810 ENSMUST00000113440,ENSMUST00000080351 3 2 2 179 19 6924801 6924819 CGTCTACCAGTAAGGAGGA 59 6924305 6924400 GTGTGGCATTATTTCGCTC 59 NA Mus musculus 50 Nwd1 ENSMUSG00000048148 ENSMUST00000109959,ENSMUST00000093427 2 2 2 81 8 75199096 75199116 CTGAGGTTGATCTGGTTAGAG 59 75199159 75205838 TATAGGACGCTCTTCTCCA 59 NA Mus musculus 50 Bcl11b ENSMUSG00000048251 ENSMUST00000109891,ENSMUST00000066047 3 2 4 113 12 109155613 109227682 CATTGCAGGTAAAGATGAGC 59 109155519 109155537 TAGATTCGGAAGCCATGTG 59 NA Mus musculus 50 Pcdhb18 ENSMUSG00000048347 ENSMUST00000055949 2 1 1 60 18 37650011 37650029 TATGAAATCCAGGCTCCAG 58 37650053 37650071 CTCCGGTGACTTTAATGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1448 ENSMUSG00000048456 ENSMUST00000054737 1 1 1 60 19 12994749 12994767 ATTCTCGCAGGATTAACAG 57 12994707 12994727 GAAGGAAGACAATGAAGAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Smcr8 ENSMUSG00000049323 ENSMUST00000056907,ENSMUST00000102667 2 2 2 60 11 60592262 60592282 GAACATCAAGATTTGCTGAGG 59 60592304 60592322 CAGGGATCTTCGTCTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930479M11Rik ENSMUSG00000049761 ENSMUST00000051495 3 1 1 60 7 31456444 31456463 GAATTATGTCATGCTGGCTC 59 31456403 31456421 GGCTAATATCCCAAAGGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sertad2 ENSMUSG00000049800 ENSMUST00000093292,ENSMUST00000109586,ENSMUST00000109585 2 3 3 60 11 20548479 20548498 TTGAAATAACAACGTCCACG 59 20548520 20548539 GCAAACAAGATGTCATCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rasd1 ENSMUSG00000049892 ENSMUST00000062405 3 1 1 60 11 59777514 59777533 AAGGTATCTGTGCAGTACTG 59 59777473 59777491 GAAGCTTCTTGTTCCTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Plagl2 ENSMUSG00000051413 ENSMUST00000109795,ENSMUST00000056924,ENSMUST00000068166 3 3 3 81 2 153058452 153061552 AAGTACAAGCTGTATAGGCAC 59 153058391 153058410 GGTGAAACATCTTGTCACAG 59 NA Mus musculus 50 Btla ENSMUSG00000052013 ENSMUST00000063654,ENSMUST00000102802 3 2 3 91 16 45239398 45239417 TGATAATGGGTCGTATAGCT 57 45239471 45242830 TTTGAGTCCTTTCTGTCAC 57 NA Mus musculus 50 Trpm3 ENSMUSG00000052387 ENSMUST00000099569,ENSMUST00000087576,ENSMUST00000037901 3 3 7 80 19 22972267 22972285 GACCCTCTACCACAATCTC 58 22974650 22975552 CTCAAGGGAATATCATCCTCC 59 NA Nonspecific Mus musculus 50 Tln2 ENSMUSG00000052698 ENSMUST00000040025,ENSMUST00000039662,ENSMUST00000085405,ENSMUST00000034771 1 4 5 80 9 67120532 67123141 CAGCTCAGGAAATGATGAC 58 67120470 67120490 CATAGTCAGTGGTCATTTGTG 58 NA Mus musculus 50 1200016B10Rik ENSMUSG00000052748 ENSMUST00000086279,ENSMUST00000064771 1 2 3 93 1 153235887 153238575 CTCTGTAAAGCAAATAAGGCAG 59 153235815 153235833 TTGACCTTGTACTGAAGGC 59 NA Mus musculus 50 Rnf157 ENSMUSG00000052949 ENSMUST00000100202,ENSMUST00000021144 3 2 4 171 11 116208408 116208669 CTTCAGAAGGAGAGGAGAC 58 116205577 116205595 TTATTGTCACACTCCATGC 57 NA Mus musculus 50 Cbx7 ENSMUSG00000053411 ENSMUST00000109616,ENSMUST00000089293,ENSMUST00000116428,ENSMUST00000109615 1 4 4 102 15 79748828 79748846 TTACCGTGACTGACATCAC 59 79748744 79748762 GCTATTCACAGCTTCTCGT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ebf4 ENSMUSG00000053552 ENSMUST00000110288,ENSMUST00000110287,ENSMUST00000110286,ENSMUST00000066048,ENSMUST00000110283 3 5 5 90 2 130132587 130132742 GGTGTATAATAATGGACTTCGG 58 130134289 130134309 CTGTCCCTCATAGATGATAGC 59 NA Mus musculus 50 Ndst1 ENSMUSG00000054008 ENSMUST00000066785,ENSMUST00000115312 3 2 3 94 18 60867318 60867336 TTTGGACCGATACATCCTG 59 60864805 60867260 TATCAAACAGGGCCTTCAC 59 NA Mus musculus 50 MGI:98976 ENSMUSG00000054626 ENSMUST00000067782,ENSMUST00000114814,ENSMUST00000114810,ENSMUST00000067763 3 4 4 135 X 51098672 51098960 GGAGATACACGATCTCCAG 58 51091088 51091107 GTTCTAATTTCACGTTGCTG 57 NA Mus musculus 50 Akr1c20 ENSMUSG00000054757 ENSMUST00000080361 1 1 2 84 13 4489492 4489510 ATTTCAGTTGACTTCGGTG 57 4486462 4489446 GTCCTCAGAAATAGAACTACC 57 NA Mus musculus 50 9430031J16Rik ENSMUSG00000054976 ENSMUST00000113491,ENSMUST00000068297,ENSMUST00000113494 1 3 4 115 1 81265722 81265740 AGTGAAAGCTCAAGAATGG 57 81265819 81294545 CTTTAGGTTCTGAGCTGTG 57 NA Mus musculus 50 Cgrrf1 ENSMUSG00000055128 ENSMUST00000068532 3 1 1 68 14 47473125 47473144 TTTAATCCTGGCTCAAGGTC 59 47473385 47473405 GGAGGACTATTATTTGCAGAC 58 NA DesignNoJunction Mus musculus 50 Mtap6 ENSMUSG00000055407 ENSMUST00000068973,ENSMUST00000107100 3 2 2 64 7 106464383 106464401 TACAGTGAGCCTTTCAAGG 59 106484511 106484529 TCTTAGATGCATCACTGGT 57 NA DesignNoJunction, InUTR Mus musculus 50 Myh8 ENSMUSG00000055775 ENSMUST00000019625 1 1 4 80 11 67115020 67115038 GATTGATGTGGAGAGGACC 59 67115080 67115174 CATTCTGATAGAACCTTGTCG 58 NA Mus musculus 50 1700008F21Rik ENSMUSG00000056018 ENSMUST00000108745,ENSMUST00000026912,ENSMUST00000108744 3 3 3 116 8 131660534 131662298 CAGCTATGTTACACAAAGCT 58 131669469 131669488 GTATTTCACCTTCTAGCAGG 57 NA Mus musculus 50 Pign ENSMUSG00000056536 ENSMUST00000112806 2 1 4 80 1 107454085 107454105 TGTGACACTGATATAGCTCAG 59 107453628 107454044 TCTAGGGCAGAAGAATAGGA 59 NA Mus musculus 50 4922501C03Rik ENSMUSG00000056919 ENSMUST00000093802,ENSMUST00000078660 1 2 2 80 9 87126993 87132675 AGAAACAGGTGTTCCTTATGG 59 87126933 87126953 AGAGAATGAGCTACATGACAG 59 NA Mus musculus 50 Fbxo18 ENSMUSG00000058594 ENSMUST00000114813,ENSMUST00000102966,ENSMUST00000071564 3 3 4 100 2 11678109 11678128 TATTTGAAACTCTGGCAGCT 59 11677389 11678048 ACTATGTTCATGATAGCTGGG 59 NA Mus musculus 50 Trp53 ENSMUSG00000059552 ENSMUST00000005371,ENSMUST00000108658,ENSMUST00000108657 1 3 3 128 11 69401125 69401874 TATGTGCACGTACTCTCCT 59 69401966 69401984 TTCTTGTAGATGGCCATGG 59 NA Mus musculus 50 Casc4 ENSMUSG00000060227 ENSMUST00000089912,ENSMUST00000089915 2 2 4 91 2 121732436 121732454 CAACTCAAACGAGTTGGTG 59 121732508 121737619 TTTAGATGTGAACCAGCAGG 59 NA Mus musculus 50 Dppa5a ENSMUSG00000060461 ENSMUST00000071991 1 1 1 81 9 78215561 78215579 AAATGGATGCTTCAGTCCA 59 78215072 78215090 TCTTCATGGATTCCTCCAG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Ddhd2 ENSMUSG00000061313 ENSMUST00000033975 1 1 2 85 8 26848745 26848763 GAGATCTTCAGGAAATGGG 57 26845575 26848697 AGGGTCAAATGAATTCTTCC 57 NA Mus musculus 50 Scfd2 ENSMUSG00000062110 ENSMUST00000075848 3 1 3 83 5 74858640 74858659 ACAGTTCAAACTCTGAAGCA 59 74854659 74858594 AAAGGAGCACTGTAGAAGG 58 NA Mus musculus 50 Scfd2 ENSMUSG00000062110 ENSMUST00000072857 1 1 3 109 5 74608389 74621351 ATGTTCATGAAGGTGAGCC 59 74608298 74608316 GCTACAAGGTCTTTGACCA 59 NA Mus musculus 50 Kcnj15 ENSMUSG00000062609 ENSMUST00000113862,ENSMUST00000113861 1 2 9 120 16 95480540 95480558 ATGGAGAACACTGCTTTCC 59 95513496 95517208 CTTTGGACCACTCTGTAGG 59 NA InUTR Mus musculus 50 Kif1b ENSMUSG00000063077 ENSMUST00000060537,ENSMUST00000055647 1 2 4 81 4 148572588 148572606 TGATGCTGTTCTTTCCCTG 59 148566781 148572543 GAAACGGTAGAAGGTCCTG 59 NA Mus musculus 50 Clip2 ENSMUSG00000063146 ENSMUST00000100647,ENSMUST00000036999 1 2 2 81 5 134989960 134991959 CATGAGCAGTATGTTGCAG 58 134989897 134989915 CCACCTTCTCTTTCCTCAC 59 NA Mus musculus 50 Krr1 ENSMUSG00000063334 ENSMUST00000075924 1 1 2 80 10 111420105 111421604 CAAAGGAAGCTTCTACCGA 59 111421648 111421666 CCAGTTTCTTCGTCTTTGC 59 NA Mus musculus 50 Hmcn1 ENSMUSG00000066842 ENSMUST00000074783,ENSMUST00000097545 3 2 2 60 1 152839929 152839948 TTACAACTTTGCTTTGGTGC 59 152723600 152723618 TGTGGTAATTGTCACTGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Serpinb5 ENSMUSG00000067006 ENSMUST00000086701,ENSMUST00000112730,ENSMUST00000112729 3 3 3 81 1 108776849 108776870 CAGAATAAGCATCTGAGTATGC 59 108776912 108778187 GCTGTTCAATCTTCTCCAG 58 NA Mus musculus 50 Gpr113 ENSMUSG00000067642 ENSMUST00000088117,ENSMUST00000114774 1 2 2 80 5 30529542 30529560 GATTCCTGTATGTGTCGCA 59 30528981 30529499 TATCAGGTTTGCAGGAACAG 59 NA Mus musculus 50 Csde1 ENSMUSG00000068823 ENSMUST00000029446 2 1 2 100 3 102843952 102844369 GAATGAACGGACAAGTTGTG 59 102844432 102844450 ACGTTCGTAGCATACACTC 59 NA Mus musculus 50 Hist1h2bp ENSMUSG00000069308 ENSMUST00000102982 3 1 3 277 13 21879566 21879584 CATCATGAACTCGTTCGTG 58 21879824 21879843 TAACAAGCAATCCATCTCTG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 EG214403 ENSMUSG00000070594 ENSMUST00000111989,ENSMUST00000027612 3 2 3 80 1 141598549 141628116 GTATGCAAAGACTCAAGAGG 58 141598488 141598507 TTCTGGTAATGACAAGGAGG 59 NA Mus musculus 50 Setdb2 ENSMUSG00000071350 ENSMUST00000111253 3 1 2 113 14 60049991 60050010 AAGATAAAGGATGGGTCTGC 59 60042305 60045328 AGTCACAGGTGTATGATCCT 59 NA Mus musculus 50 EG665097 ENSMUSG00000072584 ENSMUST00000100666 1 1 1 60 15 53717433 53717451 ATATGGGAAGGTCTCTTGG 58 53717474 53717493 GTAGTTAGGCTCTTGATTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Crygb ENSMUSG00000073658 ENSMUST00000027090 2 1 1 100 1 65128541 65128559 GAGAGTACCCTGACTACCA 59 65127112 65127133 GTAGATCCTCATTCTGTAAGTG 57 NA DesignNoJunction Mus musculus 50 Gas2l3 ENSMUSG00000074802 ENSMUST00000099374,ENSMUST00000105298,ENSMUST00000099375 3 3 3 81 10 88884335 88884972 GGATTGTGTCAAGATACGG 57 88884272 88884290 TTAAGCAAGGTCTCTTCCA 58 NA Mus musculus 50 Pde11a ENSMUSG00000075270 ENSMUST00000099992 1 1 3 119 2 75869002 75869020 ACTACGATTGGAGCATCAC 59 75860827 75867336 TTACAAGTTCAGCCACCTG 59 NA Mus musculus 50 Fnbp1 ENSMUSG00000075415 ENSMUST00000113564,ENSMUST00000113562,ENSMUST00000113561,ENSMUST00000073879,ENSMUST00000113560,ENSMUST00000100208,ENSMUST00000075326,ENSMUST00000100207,ENSMUST00000113555,ENSMUST00000102847,ENSMUST00000113552,ENSMUST00000113551 1 12 12 126 2 30960859 30997299 GGATCAGTTTGACAACTTGG 59 30952661 30960771 TGAAAGATTCCTGAGTTGCT 59 NA Nonspecific Mus musculus 50 Txnrd2 ENSMUSG00000075704 ENSMUST00000115606 1 1 3 80 16 18472969 18474782 AGCATGTAGAGGTTTACCA 57 18474826 18474844 TTATGTAGCACTGTGATGC 57 NA Nonspecific Mus musculus 50 TRBV21 ENSMUSG00000076477 ENSMUST00000103278 3 1 1 60 6 41152973 41152993 CCATGTACCATAGAGATCCAG 59 41153015 41153033 TAGCACAGAAGTACACAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-50 ENSMUSG00000076562 ENSMUST00000103363 2 1 1 82 6 69650833 69650853 GGTCTGGGAACTCTTATTCTC 59 69650771 69650789 ACTAGTAAACTGCTGGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NM_001101804.1 ENSMUSG00000078863 ENSMUST00000108940 3 1 3 81 2 177566853 177567375 ACGAACACATACAGGAGAG 58 177566790 177566808 ATGTTCTTGTTGGTCACCA 59 NA Nonspecific Mus musculus 50 A2ARW4_MOUSE ENSMUSG00000078865 ENSMUST00000108945 3 1 2 93 2 177356396 177356415 CCTATAGGAATCTCACAGCT 57 177354990 177356148 CTTTCATGCCTTCCATGAC 58 NA Nonspecific Mus musculus 50 0610010B08Rik ENSMUSG00000078890 ENSMUST00000109031,ENSMUST00000109030 2 2 3 60 2 175650482 175650501 AGAACATACGATTGAAGACC 57 175650524 175651699 ACTTCTTTCATGCCTTCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Klra1 ENSMUSG00000079853 ENSMUST00000032288,ENSMUST00000081796 1 2 3 80 6 130330621 130330640 ATAAATCTGCAGGATTGCAG 58 130329092 130330578 ATGAACACCTTCTGTAGCC 59 NA Mus musculus 50 mmu-mir-469 ENSMUSG00000070132 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-292 ENSMUSG00000078041 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-466k ENSMUSG00000080424 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Tcfe3 ENSMUSG00000000134 ENSMUST00000115679,ENSMUST00000077680,ENSMUST00000079542,ENSMUST00000115678,ENSMUST00000115680,ENSMUST00000115677,ENSMUST00000101695 1 7 7 80 X 7343974 7344575 TACTCAAGGTTCAGACCCA 59 7344619 7344637 AGTACTGTTTGACCTGCTG 59 NA Mus musculus 50 Mgl1 ENSMUSG00000000318 ENSMUST00000000327,ENSMUST00000102571,ENSMUST00000100954 2 3 4 99 11 69983755 69983926 GAGAAAGGCTTTAAGAACTGG 58 69983987 69984005 GACCACCTGTAGTGATGTG 59 NA Mus musculus 50 Cttnbp2 ENSMUSG00000000416 ENSMUST00000090601,ENSMUST00000000426 3 2 2 80 6 18370819 18370837 GCAGACCTAATTAACCACG 58 18364291 18370775 TAGGCAGTTCTTGAAACCT 58 NA Mus musculus 50 Polr3d ENSMUSG00000000776 ENSMUST00000000793 3 1 1 124 14 70840941 70840959 ATAAGACCGTGGACATGTC 59 70840566 70840855 ATCGATGAAGTCATCCTTCTC 59 NA Mus musculus 50 Tpd52l2 ENSMUSG00000000827 ENSMUST00000108800,ENSMUST00000069712,ENSMUST00000108799,ENSMUST00000000844,ENSMUST00000108801,ENSMUST00000108802 1 6 6 113 2 181234591 181234609 TTTATGACTGACGTCCCTG 58 181234686 181236618 TTCTTCCACCTTAGCAAGC 59 NA Mus musculus 50 Fndc5 ENSMUSG00000001334 ENSMUST00000102600 3 1 1 135 4 128816778 128817095 GAACAAAGATGAGGTGACC 58 128819325 128819343 GATGATATCATACTGGCGG 57 NA Mus musculus 50 Unc119 ENSMUSG00000002058 ENSMUST00000108295 1 1 3 83 11 78161754 78161978 GGAGCTAATTCTGAAGTCCC 59 78162024 78162042 ATCTCACTGACTGCAAGAG 58 NA Mus musculus 50 Csnk1g2 ENSMUSG00000003345 ENSMUST00000085435,ENSMUST00000019676 2 2 3 143 10 80097379 80100643 TCGCCTAGGAAAGAATCTG 58 80100912 80100930 AAGTAGTAGACCTGAGGGA 58 NA Mus musculus 50 Cyp17a1 ENSMUSG00000003555 ENSMUST00000026012 2 1 1 81 19 46745249 46745459 CTGGAGAAGATGATATGTCAGG 59 46745189 46745207 TAGACAGATCTCGGGACTC 59 NA Mus musculus 50 Rps6ka1 ENSMUSG00000003644 ENSMUST00000105894,ENSMUST00000003741 2 2 2 80 4 133419655 133419929 GACTGGAATAAGCTCTACCG 59 133419594 133419612 AAAGTAGAAGGTGTCGTCG 59 NA Mus musculus 50 Chmp2b ENSMUSG00000004843 ENSMUST00000004965 1 1 1 86 16 65547153 65547171 GTCACCTCTATGTCCACAC 59 65545616 65547103 TTGCATTGTCTTTGCAGTG 59 NA Mus musculus 50 Ctr9 ENSMUSG00000005609 ENSMUST00000005749,ENSMUST00000098103 3 2 2 80 7 118178825 118178844 AAGAAGGATTACAGAGGAGC 58 118178887 118181913 TAAACGAACTTCAGCTGGA 58 NA Mus musculus 50 Pldn ENSMUSG00000005804 ENSMUST00000005954 3 1 1 71 2 122569881 122569901 CTAGATACACTGGAACAAGAG 57 122569934 122571793 GAACAAAGCATTGATGTCC 57 NA DesignNoJunction Mus musculus 50 Tpr ENSMUSG00000006005 ENSMUST00000064506 1 1 1 80 1 152296300 152296319 TCAGACGAGTAAGACTTCAG 58 152296360 152296873 CATGGCTTATACCTCTTTGTC 58 NA Mus musculus 50 Elk3 ENSMUSG00000008398 ENSMUST00000008542,ENSMUST00000105291 2 2 2 163 10 92747647 92747665 AACATGAGCACCTCATCTG 59 92728414 92747521 CTTGATGATGTTCTTGTCGT 58 NA DesignRelaxed Mus musculus 50 Ascl2 ENSMUSG00000009248 ENSMUST00000009392 3 1 1 76 7 150154205 150154224 GTAAAGCTGGTAAACTTGGG 58 150154148 150154166 TTACTCAGCTTCTTGTTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cad ENSMUSG00000013629 ENSMUST00000013773,ENSMUST00000114646,ENSMUST00000031049 3 3 3 80 5 31361178 31361360 GAGGTCTCTATTAAGACTCCAC 59 31361401 31361419 ATACTTGAGGCCACAATCC 59 NA Mus musculus 50 Entpd2 ENSMUSG00000015085 ENSMUST00000114287 1 1 2 103 2 25253577 25253595 GAATGTCTTGAACAGGCAC 59 25253662 25254060 CCAGCCATATTGAGTAGGC 59 NA Mus musculus 50 Sulf1 ENSMUSG00000016918 ENSMUST00000088585,ENSMUST00000066698 3 2 2 80 1 12808570 12808588 CCCTACGACTTTGACATCC 59 12808631 12810497 AACAATCTGTGGGACTATCG 59 NA Mus musculus 50 Kctd2 ENSMUSG00000016940 ENSMUST00000103035,ENSMUST00000106534,ENSMUST00000106533 3 3 3 83 11 115288776 115288794 GCAGTGTCAAGAGGAAGAG 59 115288840 115290610 GAGCCAATGCTGATTAACTG 59 NA Mus musculus 50 Zswim1 ENSMUSG00000017764 ENSMUST00000017908 2 1 1 60 2 164650345 164650366 CTGAATGGTCTACTCATTAAGG 57 164650387 164650405 GAGTCTTGCTAATCTGGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Slc12a4 ENSMUSG00000017765 ENSMUST00000034370,ENSMUST00000116429 2 2 2 82 8 108469627 108469761 CTGGAAGACCTTTATTGACAC 58 108469565 108469586 GGTAGAAAGCTATGTTCTTTGG 59 NA Mus musculus 50 Crk ENSMUSG00000017776 ENSMUST00000017920 1 1 4 60 11 75506202 75506220 AATGCCTACGACAAGACAG 59 75516876 75516895 TCTTCGTAACCTTTACCAGC 59 NA DesignNoJunction Mus musculus 50 Rab5a ENSMUSG00000017831 ENSMUST00000017975 3 1 1 191 17 53636996 53637724 CAAATGAGGAATCCTTTGCG 59 53639742 53639761 ATGTCTTAGCTGATGTCTCC 58 NA Mus musculus 50 Psmb6 ENSMUSG00000018286 ENSMUST00000018430 2 1 1 220 11 70339917 70340055 GGTTTCCACAGTATTGAACTG 59 70340742 70340760 CCATAGATGTACGAGCTCC 59 NA DesignRelaxed Mus musculus 50 Cpsf4l ENSMUSG00000018727 ENSMUST00000018872,ENSMUST00000116323 3 2 5 67 11 113570157 113570707 ATGGACAAGTCCAGTTCAG 59 113567874 113570126 CATAGCATCCCTTTCACAC 58 NA DesignRelaxed Mus musculus 50 Rps6kl1 ENSMUSG00000019235 ENSMUST00000019379 2 1 2 215 12 86481820 86487824 ATCATCAAGAAGGTGCAGG 59 86480596 86480614 TAGATGTGACCAAAGGGTG 58 NA DesignRelaxed Mus musculus 50 Wasf1 ENSMUSG00000019831 ENSMUST00000019975,ENSMUST00000105509 2 2 2 80 10 40653077 40654287 TCATTATGAGACAAGGCCAC 59 40654330 40654348 ATCTGACTGAATGGCAAGG 59 NA Mus musculus 50 Lama2 ENSMUSG00000019899 ENSMUST00000092639,ENSMUST00000105517,ENSMUST00000092638 1 3 3 80 10 26735232 26735251 GATCATTCTCTTGGGAAGTG 57 26726621 26735189 ATGGCATAATAAGCCTGTG 57 NA Mus musculus 50 9430073N08Rik ENSMUSG00000019909 ENSMUST00000020064 3 1 1 108 10 51307095 51309870 TACCGCCTGAAATGATAGC 59 51307005 51307023 TTTGCAGACACAATCACAG 58 NA DesignNoJunction Mus musculus 50 Mum1 ENSMUSG00000020156 ENSMUST00000020365 3 1 1 88 10 79702712 79702730 ACTCATCACTGACTACCGT 59 79703178 79703517 CAGGGTAGCTGATATCAGC 59 NA Mus musculus 50 Cobl ENSMUSG00000020173 ENSMUST00000093316 3 1 5 175 11 12243752 12243771 GGGTCAAGACAAGGTATCAG 59 12196559 12209624 CACAGCAATAAACCACTGTG 59 NA Mus musculus 50 Cpm ENSMUSG00000020183 ENSMUST00000020399 1 1 1 80 10 117066928 117096832 AATCTGTGAGAGGTAGAAACC 59 117096874 117096892 TGAATTCTGGAATCCCGAC 59 NA Mus musculus 50 Nsg2 ENSMUSG00000020297 ENSMUST00000093219 1 1 3 77 11 31917725 31931778 TGAATTTACGGTGGCTCTC 59 31931818 31931837 TGTCTGTGTTGTTGATACCA 59 NA DesignRelaxed Mus musculus 50 Tlk2 ENSMUSG00000020694 ENSMUST00000106939,ENSMUST00000106936,ENSMUST00000106941,ENSMUST00000015107,ENSMUST00000106942,ENSMUST00000092537 2 6 6 84 11 105116369 105118194 CAATTCGCAGTTTAAAGACC 57 105118241 105118259 AACTTCACTGAAACCTCCT 58 NA Mus musculus 50 Nxn ENSMUSG00000020844 ENSMUST00000021204 3 1 1 89 11 76075098 76075118 ATAGCTGAGAAGATCATTGCC 59 76072235 76075047 GTCAGTCATGTCATCCTCC 59 NA Mus musculus 50 9030205A07Rik ENSMUSG00000021198 ENSMUST00000101099 3 1 2 80 12 104240177 104249418 ATGGCTATATTGGGTTCCT 57 104249462 104249480 TGCGATCATTAGCATTGAG 57 NA Mus musculus 50 Mctp1 ENSMUSG00000021596 ENSMUST00000109583,ENSMUST00000109591,ENSMUST00000109589,ENSMUST00000022086,ENSMUST00000046098 2 5 5 60 13 76851369 76851387 ATGACTTTATGGGCTCAGC 59 76851410 76862937 TCTGTGGACCTGTTTAACTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Hexb ENSMUSG00000021665 ENSMUST00000022169 3 1 1 83 13 97959300 97961178 AGCGTTACGAGGTTTAGAG 59 97959002 97959023 GCTATACTGGATTCATTGATGG 58 NA Mus musculus 50 Plk2 ENSMUSG00000021701 ENSMUST00000022212 3 1 1 83 13 111189703 111189974 GAGAACCTCATGGATGGTG 59 111190021 111190039 AGACTTTAACCACTGCAGG 59 NA Mus musculus 50 2410002O22Rik ENSMUSG00000021711 ENSMUST00000022224 3 1 1 82 13 104959949 104959967 GATGCGATTGACTAAACCT 57 104958628 104959903 GGTTAAAGAGATCACCAGG 57 NA Mus musculus 50 Comtd1 ENSMUSG00000021773 ENSMUST00000022295 2 1 1 185 14 22667324 22667342 GTACTTTCACGGGCTACTC 59 22666958 22667102 CTAGGAGCTCATCCAATGTC 59 NA Mus musculus 50 4921509B22Rik ENSMUSG00000021997 ENSMUST00000022574 2 1 1 112 14 75507092 75507111 ATTACAAAGCTTCCTGATGG 57 75486136 75498041 TCAAGTGATCTGAGTTTCTG 57 NA Mus musculus 50 Cpb2 ENSMUSG00000021999 ENSMUST00000022576 3 1 1 82 14 75667949 75670502 TTCATAGGCTACGTGACAC 59 75670547 75670566 GGCATGATGTAGAAATCCAC 58 NA Mus musculus 50 Samm50 ENSMUSG00000022437 ENSMUST00000023071 1 1 1 95 15 84029083 84030212 CATGTCATGGTGAAGATGC 58 84030270 84030289 CAACCATGGTGTTGTAACTG 59 NA Mus musculus 50 Lsg1 ENSMUSG00000022538 ENSMUST00000023190,ENSMUST00000089772 1 2 2 80 16 30571611 30573287 GACTTGAAGGAGGAAGTAGAC 59 30571551 30571569 TTCATTCGCATCCAAACTG 58 NA Mus musculus 50 Thpo ENSMUSG00000022847 ENSMUST00000115437,ENSMUST00000076422 3 2 2 76 16 20728816 20728834 AAATAAACTGCTGCGTGAC 59 20728508 20728526 GGATAGACAAAGGGTCGAC 59 NA DesignNoJunction Mus musculus 50 Dyrk1a ENSMUSG00000022897 ENSMUST00000023614 2 1 1 90 16 94893117 94893137 AGAACATCCTTCTGTGTAACC 59 94893188 94894954 TACTGGTATATCCTCTGCCC 59 NA Mus musculus 50 Psmg1 ENSMUSG00000022913 ENSMUST00000023630 3 1 1 84 16 96201709 96203717 TTGGTGAAGAACATTCCTG 57 96201643 96201662 GTCATGTGTAAATGTTGCTC 57 NA Mus musculus 50 Tmem52 ENSMUSG00000023153 ENSMUST00000023920 3 1 1 89 4 154844423 154844441 GTACTTTGGAGAGCCAGAC 59 154844494 154844512 ACAACTTCATCGTAGGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem176a ENSMUSG00000023367 ENSMUST00000101426 1 1 1 101 6 48794166 48794672 AAGCATGCTAAAGACCCTG 59 48794735 48794755 CAGATGTAGACACATACAGGG 59 NA Mus musculus 50 Rps6ka2 ENSMUSG00000023809 ENSMUST00000024575,ENSMUST00000024619,ENSMUST00000097427 3 3 3 80 17 7451060 7451079 GGGTCAGATCTAAGATGGAG 58 7451122 7453649 TCTGAAAGGCATAATGCAG 57 NA Mus musculus 50 Paqr4 ENSMUSG00000023909 ENSMUST00000024702 2 1 1 67 17 23875183 23875201 GTATCACCTCTTCATGTGC 57 23875134 23875152 ACATATCCAAGGCAAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lpin2 ENSMUSG00000024052 ENSMUST00000112646,ENSMUST00000112649,ENSMUST00000053173,ENSMUST00000112647,ENSMUST00000024848 2 5 5 85 17 71578679 71578697 GACTACAAGGAGCCTTCAC 59 71578745 71579620 GGGTAGGTGGTTTCTAATGG 59 NA Mus musculus 50 2410091C18Rik ENSMUSG00000024082 ENSMUST00000024887 3 1 1 81 17 79336928 79336947 AATAAAGTCTACAGGTCCCA 57 79336990 79337895 ATGCACATAATATCCCTTGG 57 NA Mus musculus 50 Pdia2 ENSMUSG00000024184 ENSMUST00000039113 1 1 1 80 17 26333736 26333845 GAAATCAAGCACTATCTCCTG 58 26333676 26333694 ATTCTTGCTCACGAGAGTC 59 NA Mus musculus 50 Ankrd1 ENSMUSG00000024803 ENSMUST00000025718 1 1 1 80 19 36191351 36192333 CTGCGATGAGTATAAACGG 58 36191289 36191307 GCCTCCATTAACTTCTCCA 58 NA Mus musculus 50 Minpp1 ENSMUSG00000024896 ENSMUST00000025827 3 1 1 61 19 32568445 32572879 TAGATGATGCAAGGGTTCTG 59 32572901 32572921 ATAGCTTCGTTTCCAGTACTG 59 NA DesignRelaxed Mus musculus 50 Shoc2 ENSMUSG00000024976 ENSMUST00000025932 3 1 1 80 19 54104084 54104359 CAAGGATCTGCAGAAATTAGTC 59 54104400 54104418 GTGAGGTTGGTAAGGTGAC 59 NA Mus musculus 50 EG665413 ENSMUSG00000025644 ENSMUST00000084990 1 1 1 60 9 108996778 108996796 TTAGAGGGCTCTAAATCGG 58 108996736 108996754 ATCAGCCCTTAGTGAAGTG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rbbp5 ENSMUSG00000026439 ENSMUST00000027700 2 1 1 83 1 134381482 134386170 GTCTGTTCTTTGTGTTGGAG 58 134386216 134386234 AAGAACATCCCACTGTGAC 59 NA Mus musculus 50 Cabc1 ENSMUSG00000026489 ENSMUST00000027766 3 1 1 80 1 182099841 182100206 CCATGAAGATCCAGTACCC 59 182099779 182099797 TACTCATGTTCAGCACAGC 59 NA Mus musculus 50 Ccdc3 ENSMUSG00000026676 ENSMUST00000027988 2 1 1 84 2 5062412 5062430 GACTTTCTCGAGTGACTGG 59 5149988 5150006 GTCCTCTTCCTCAAACAGG 59 NA DesignNoJunction Mus musculus 50 Zmynd19 ENSMUSG00000026974 ENSMUST00000028350 2 1 1 64 2 24807004 24807022 ACTGATCGATGAGCAAGAC 59 24807050 24808121 CTACTTCCATTCGAGCCTC 59 NA DesignRelaxed Mus musculus 50 8430406I07Rik ENSMUSG00000027424 ENSMUST00000110028,ENSMUST00000110027,ENSMUST00000028910 3 3 3 91 2 144104788 144104806 AATACATATGACAACCCGC 57 144104860 144105233 ATTAATCCACACTGAACCTG 57 NA Mus musculus 50 Pdrg1 ENSMUSG00000027472 ENSMUST00000028972 1 1 1 80 2 152839792 152839810 GGACACCAAGAGGAATCAG 59 152838176 152839750 CAAACCATCACATCTTCAGAG 58 NA Mus musculus 50 Tsc22d2 ENSMUSG00000027806 ENSMUST00000099090 2 1 2 103 3 58232182 58232200 ATTTGAACACGTGTCAGGA 59 58263298 58263941 TTTCACCAGATCCATTGCT 59 NA Mus musculus 50 Ppa2 ENSMUSG00000028013 ENSMUST00000029644,ENSMUST00000106315 2 2 2 81 3 133033362 133033381 ATTAACTCTGCACATGAACG 58 133033424 133036600 TGTGCACATTTACACAACTG 59 NA Mus musculus 50 Snx27 ENSMUSG00000028136 ENSMUST00000029783,ENSMUST00000107283,ENSMUST00000107281 1 3 3 80 3 94307430 94307449 CATGTTATCACAGCCATCAG 58 94306895 94307387 TATTACCTGGTTCTCCAGC 58 NA Mus musculus 50 Cyp7a1 ENSMUSG00000028240 ENSMUST00000029905 3 1 1 87 4 6196374 6198276 CCTGCCAGTACTAGATAGC 58 6196305 6196323 AGTGAAGTCCTCCTTAGCT 59 NA Mus musculus 50 Chmp5 ENSMUSG00000028419 ENSMUST00000030128 3 1 1 99 4 40905941 40905961 GAGGATATGATGGAAGATGCA 59 40906021 40907900 CATCTAACTCTGCTTCCAGG 59 NA Mus musculus 50 Rad23b ENSMUSG00000028426 ENSMUST00000030134 3 1 1 80 4 55393981 55395362 TTCTAATGGGAATCCCTGG 58 55395406 55395424 GAGGAGTTCCAGTACTCAC 58 NA Mus musculus 50 Slc6a9 ENSMUSG00000028542 ENSMUST00000063857,ENSMUST00000030269,ENSMUST00000102685 1 3 3 109 4 117536152 117536297 AAGTCTTCAGGGAAAGTGG 59 117536370 117536388 TACATGATACCCGTGAAGG 58 NA Mus musculus 50 Arhgef19 ENSMUSG00000028919 ENSMUST00000105791 1 1 3 188 4 140796651 140800743 CTGCTTTAGAGTCTCCAGAG 59 140802099 140802120 ATTCCTTCTTTACTCTGTCACC 59 NA InUTR Mus musculus 50 H6pd ENSMUSG00000028980 ENSMUST00000030830,ENSMUST00000084117 2 2 2 60 4 149368592 149368612 GGAGATCATCTTGAAGGAGAC 59 149358256 149358276 ATACTCCTCATAGAAACTGGC 58 NA DesignNoJunction Mus musculus 50 2310079F23Rik ENSMUSG00000029097 ENSMUST00000030980 2 1 1 81 5 35913739 35913757 GGCCTGAAGTAACAGATCC 59 35912611 35913695 TCCTCTTCCCATAGGATCAG 59 NA Mus musculus 50 Ppat ENSMUSG00000029246 ENSMUST00000031158 3 1 1 94 5 77347275 77348408 ATATGCAACAAAGTGTGGG 58 77347199 77347218 GTCTTAACCTCATGTTTGGT 57 NA Mus musculus 50 Rest ENSMUSG00000029249 ENSMUST00000080359,ENSMUST00000113449 1 2 3 80 5 77704281 77704301 ACTTTGTCCTTACTCAAGCTC 59 77704340 77709746 CATTTAAATGGCTTCTCACCTG 59 NA Mus musculus 50 1700123K08Rik ENSMUSG00000029526 ENSMUST00000031501 2 1 1 127 5 139003775 139004063 ACTTAAACTTGAGGAAGATCCC 59 139003669 139003687 TCACAAGCTCAGTGTTCTC 59 NA Mus musculus 50 Asns ENSMUSG00000029752 ENSMUST00000115542,ENSMUST00000031766 1 2 2 80 6 7631301 7631320 AAGTTCAGTATCCTCTCCAG 58 7630202 7631258 AATTTGCCACCTTTCTAGC 58 NA Mus musculus 50 Usp18 ENSMUSG00000030107 ENSMUST00000032198 3 1 1 80 6 121212829 121218567 TGATACCAAGGAACAGTCTG 59 121218610 121218628 TAATGACCAAAGTCAGCCA 58 NA Mus musculus 50 Sspn ENSMUSG00000030255 ENSMUST00000032383 1 1 1 137 6 145882861 145882879 CAGAGATACTCCGTTCTGG 58 145904201 145909669 CTCAACAGGAAGTAGAATACC 57 NA DesignNoJunction Mus musculus 50 Bhlhb3 ENSMUSG00000030256 ENSMUST00000032386 1 1 1 88 6 145812755 145813107 CTGAAATTGACAACACTGGG 59 145812686 145812704 TCAGTTAAGGCTGTTAGCG 59 NA Nonspecific Mus musculus 50 D030011O10Rik ENSMUSG00000030313 ENSMUST00000111557,ENSMUST00000032458 1 2 2 80 6 149016624 149016643 TGGGATTAGAGAACCTAGTG 57 149003601 149016584 GCTGATAATCTTGTGAGTAGAG 58 NA Mus musculus 50 Asb7 ENSMUSG00000030509 ENSMUST00000078538 2 1 2 104 7 73792807 73804550 TACAAGACGTCACAAGACAG 59 73792722 73792740 TTGGTAGCTCATCAAGCAG 59 NA Mus musculus 50 Mfge8 ENSMUSG00000030605 ENSMUST00000107409 2 1 2 105 7 86290210 86290228 AATGTCTGGTGACTTTGGA 58 86287927 86290141 GTAGAACAACCGGTTTCAC 58 NA Mus musculus 50 Kif22 ENSMUSG00000030677 ENSMUST00000106320,ENSMUST00000032915 3 2 2 130 7 134174542 134174560 GAGTATGGAACGTTTGCTG 58 134173002 134174451 TCATCTTAAGCCTCTCAATCTC 59 NA Mus musculus 50 Casp3 ENSMUSG00000031628 ENSMUST00000093517 2 1 1 101 8 47721669 47723283 AGCACCTGGTTACTATTCC 58 47723347 47723366 ATAAATTCTAGCTTGTGCGC 58 NA Mus musculus 50 Edg4 ENSMUSG00000031861 ENSMUST00000034325,ENSMUST00000066018 2 2 2 117 8 72348175 72348193 GACGGTTGTCATCATTCTG 58 72350269 72350287 GAAGTACTTCTCCACAGCC 59 NA DesignNoJunction Mus musculus 50 Dus2l ENSMUSG00000031901 ENSMUST00000034375 2 1 1 81 8 108557670 108559882 AGTATTCCACTAAGGGAGG 57 108565725 108565743 TTAACAAGAGTGCTGAGGA 58 NA Mus musculus 50 Wwp2 ENSMUSG00000031930 ENSMUST00000034407 1 1 1 80 8 110078403 110078421 ACAACCCATGAACTGAAGG 59 110078463 110078890 AGTCAGCAGCATGATATACTC 59 NA Mus musculus 50 Olfm2 ENSMUSG00000032172 ENSMUST00000034692 3 1 1 125 9 20477168 20477186 TTGAGCTAAGGACATTCCG 59 20476789 20477079 CCTTCAGTTCCTGAAAGCT 59 NA Mus musculus 50 1700080E11Rik ENSMUSG00000032566 ENSMUST00000035180 2 1 1 151 9 105046812 105046830 CTAACACTAGAGCAGCTCC 59 105045894 105045913 CCAATGAAGGAATTCTCCAG 58 NA DesignNoJunction Mus musculus 50 Prkar2a ENSMUSG00000032601 ENSMUST00000049946 1 1 2 60 9 108595383 108595401 TGCTTTCCGAAGACAAGAG 59 108595424 108595443 TGATCATCCGGTTTATTCGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sfrs12 ENSMUSG00000032621 ENSMUST00000109322,ENSMUST00000074616 3 2 2 81 13 104548310 104548328 CTCAAAGTCCAGGTCTAGC 59 104543206 104548268 CCTATTATGGGATCTACTCCTG 58 NA Mus musculus 50 Phldb2 ENSMUSG00000033149 ENSMUST00000076333,ENSMUST00000036355,ENSMUST00000077934 3 3 3 82 16 45802857 45802875 CAACCTTGAGGAACTTGAG 57 45801727 45802811 CGCATTCCATATCCAACTC 58 NA Mus musculus 50 2410129H14Rik ENSMUSG00000033186 ENSMUST00000042662 1 1 1 60 14 99435729 99439751 GGTACTGAGGCACTAAAGG 59 99435687 99435706 CTCATCAGGAATTCTCTGGA 58 NA DesignNoJunction, InUTR Mus musculus 50 Fancd2 ENSMUSG00000034023 ENSMUST00000036340 1 1 2 80 6 113510125 113510144 TTCAAGTACAAGCTCATTGG 58 113510185 113511715 GTTAGATGGTACACTTCTGTC 57 NA Mus musculus 50 Gtf2h5 ENSMUSG00000034345 ENSMUST00000039487,ENSMUST00000100955 2 2 2 81 17 6080866 6084481 TATAGAATGTGACCCTGCC 58 6084524 6084544 CTGAATGATGAACTTCTTCCC 58 NA Mus musculus 50 Cd300a ENSMUSG00000034652 ENSMUST00000045151,ENSMUST00000106582 3 2 2 95 11 114759049 114759067 TTGTCTGTGTTAGCTCTCC 58 114759126 114760669 ATGCCTATCAGCTTTGACC 59 NA Mus musculus 50 Itga2b ENSMUSG00000034664 ENSMUST00000103086 3 1 1 80 11 102319700 102319719 GAAAGAGAATGAGTCCAGGG 59 102319490 102319658 AGCATTGTGATTCCTATCCG 59 NA Mus musculus 50 Lars2 ENSMUSG00000035202 ENSMUST00000038863 1 1 1 80 9 123362497 123363832 TGTGGGATGTAAAGACTGAC 59 123363874 123363893 CGATGAATCTTGTTGTCAGG 58 NA Mus musculus 50 Vps13c ENSMUSG00000035284 ENSMUST00000077879,ENSMUST00000057972,ENSMUST00000098601,ENSMUST00000056871,ENSMUST00000113630,ENSMUST00000113629 1 6 6 80 9 67750655 67750675 CAATTCCTGTTCTTTCAGGAG 58 67750717 67751374 CGTCAGACTCTGATTCCAC 59 NA Mus musculus 50 BC067068 ENSMUSG00000036009 ENSMUST00000046638 3 1 1 80 10 105260362 105263068 ATTGAAGATCTGGAGGACTG 58 105260301 105260322 TGTAAATATCCGCAGAGTACTG 59 NA Mus musculus 50 Tmtc2 ENSMUSG00000036019 ENSMUST00000061506 3 1 1 82 10 104740703 104740722 CATGGAATCACTGAGATCCA 59 104708627 104740658 TCTTACGACCTGTTAAGGC 59 NA Mus musculus 50 Glt8d3 ENSMUSG00000036197 ENSMUST00000049484 2 1 1 60 15 93089614 93092189 TTTAAAGACAGACTTGCCAG 58 93089573 93089591 TAGGGTACAGGCTGTAGTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 1700019O17Rik ENSMUSG00000036574 ENSMUST00000046004 1 1 1 60 1 88323189 88323207 TTCATTCGGACTGATACCT 57 88323231 88323249 TGGAAATCTGCTTGGAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mgat4b ENSMUSG00000036620 ENSMUST00000041725 1 1 1 81 11 50046108 50046126 ATGAAGAACTTTGCCCTCC 59 50046171 50046455 ACATCTTCCCAATGAAGCC 59 NA Mus musculus 50 Dner ENSMUSG00000036766 ENSMUST00000049126 1 1 1 80 1 84402560 84402578 GAATGGAGGTACCTGTGAC 59 84392306 84402516 ATGTCACACTCTTCACCTG 59 NA Mus musculus 50 Bag4 ENSMUSG00000037316 ENSMUST00000038498 1 1 1 85 8 26887948 26887966 TACTGGAATTCTGTGCGAC 59 26881792 26887899 TAAGAATTCAGGCTCTGGC 59 NA Mus musculus 50 Hrh4 ENSMUSG00000037346 ENSMUST00000041676 2 1 1 95 18 13174441 13180284 CAAATGCTGTGTCTTATAGGG 58 13180341 13180359 GGCCATTTACCAAGAAAGC 59 NA Mus musculus 50 Nov ENSMUSG00000037362 ENSMUST00000050027 2 1 1 80 15 54580904 54583768 GGAAGTAACAGACAAGAAAGG 58 54583809 54583828 CAATTCTCGAACTGTAGGTG 58 NA Mus musculus 50 C330005M16Rik ENSMUSG00000037469 ENSMUST00000040112 1 1 1 80 7 29399928 29399946 CTTCTTTCTGCACTATGGC 58 29399793 29399885 TTCTTATTGGCTTTCTGGAG 57 NA Mus musculus 50 NP_001074894.1 ENSMUSG00000038132 ENSMUST00000037923 2 1 1 185 13 46514559 46515653 TACGGATTTGTCACCATGG 59 46517253 46517272 GAAAGGTCTCTGGATAAGGG 59 NA DesignNoJunction Mus musculus 50 Lhb ENSMUSG00000038194 ENSMUST00000072453 1 1 1 142 7 52676737 52676908 CTACTGTCCTAGCATGGTC 58 52677014 52677032 CAGGAAAGGAGACTATGGG 58 NA DesignNoJunction Mus musculus 50 Pptc7 ENSMUSG00000038582 ENSMUST00000053426 1 1 1 60 5 122769837 122770828 GGATTAAATGTGAGAGGTGG 57 122770851 122770869 CAGCCACTATTGAGAGGAG 59 NA DesignRelaxed Mus musculus 50 Ensa ENSMUSG00000038619 ENSMUST00000058230,ENSMUST00000037983 3 2 2 166 3 95429090 95430680 GAGAAGCAGGATACACAGG 59 95432475 95432494 ATGTTGTAGTCTCCTGAGTC 58 NA DesignNoJunction Mus musculus 50 Zfp653 ENSMUSG00000038895 ENSMUST00000115325 2 1 2 157 9 21862140 21862259 AGACCAAGAAAGACACCAC 59 21862001 21862020 TTCTTCTCCATCCACTTCTG 59 NA Mus musculus 50 Asb17 ENSMUSG00000038997 ENSMUST00000044089 1 1 1 82 3 153513895 153516309 AGATAGAGACACAGCTGAG 57 153516355 153516373 ATCCTTGTATCTTGTTGGC 57 NA Mus musculus 50 Arhgap18 ENSMUSG00000039031 ENSMUST00000039557 3 1 1 105 10 26565921 26569685 CAAAGAACCTGATGAGGGA 58 26569754 26569772 AAACAGAATGCTTTCCTGC 58 NA Mus musculus 50 Itga9 ENSMUSG00000039115 ENSMUST00000044165 1 1 1 80 9 118545674 118545692 CCATGGATTCTGCTACCTC 59 118545733 118561624 TTCTTATACTCTTCGTAGCAGG 59 NA Mus musculus 50 Fanci ENSMUSG00000039187 ENSMUST00000036865,ENSMUST00000036896 2 2 2 80 7 86556071 86556090 AAATGCCTATGTCCCTTCAG 59 86556132 86557516 AAGATCAAACACCTGTTCCT 59 NA Mus musculus 50 4921524L21Rik ENSMUSG00000039540 ENSMUST00000044829,ENSMUST00000075174 1 2 2 93 18 6630079 6630097 AACTGATCAGCTCCATACG 59 6630154 6635821 TTCTTCATTTCGGCTAGCT 58 NA Mus musculus 50 A730069N07Rik ENSMUSG00000039594 ENSMUST00000036104 1 1 2 87 8 37921119 38000622 AAGAGAAAGGAAACAAGGGA 58 37921051 37921069 CTTGGTCTAGTTGGTCCAG 59 NA Mus musculus 50 9530096D07Rik ENSMUSG00000039999 ENSMUST00000040411 2 1 1 68 4 131858507 131858525 CTTTGAACACATCCAAGCC 59 131858457 131858475 AAGAAGACCACCTTGTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lrp1 ENSMUSG00000040249 ENSMUST00000049149 2 1 1 80 10 127029191 127030425 TGGGAAGTCTTGTAAGAAACC 59 127029131 127029149 TCCATGCCTCTAATGATGC 59 NA Mus musculus 50 Os9 ENSMUSG00000040462 ENSMUST00000080975 3 1 1 85 10 126533788 126534995 CCCTACAGGCAAGATTGAG 59 126533721 126533739 TATCCTCATCAGTCAGCCA 59 NA Mus musculus 50 D030051N19Rik ENSMUSG00000040506 ENSMUST00000045705,ENSMUST00000111317,ENSMUST00000111316,ENSMUST00000099712,ENSMUST00000045699 2 5 5 81 2 91715972 91725765 AAATCAGTAATGCCTCTGTG 57 91725809 91725827 CCATCTGCAGAAATGTCAC 58 NA Mus musculus 50 Nrl ENSMUSG00000040632 ENSMUST00000062232 1 1 2 72 14 56141322 56142935 CATCACATAAAGAACACCTCTC 58 56141271 56141289 TATTCCATAGCCAAGGGAC 58 NA DesignRelaxed, InUTR Mus musculus 50 Rbm35a ENSMUSG00000040728 ENSMUST00000108313,ENSMUST00000043781,ENSMUST00000108310,ENSMUST00000108311,ENSMUST00000108312,ENSMUST00000041113 3 6 6 81 4 11306488 11306506 AAGAGTTCAAGAAGTGCTG 57 11294318 11306443 TCAAAGTTCAGGCTTTCTG 57 NA Mus musculus 50 2310036O22Rik ENSMUSG00000041203 ENSMUST00000047281 3 1 1 65 8 87553460 87553478 ACAAACTAGCCCTCAAGAC 59 87553505 87553783 TTGTTAATACCTCATCCTCCG 59 NA DesignRelaxed Mus musculus 50 Rgl2 ENSMUSG00000041354 ENSMUST00000047503 3 1 1 101 17 34072184 34072308 TTAACTGAAGCTCAGAGTCAC 59 34072371 34072389 TGTGATCACTAGTGTTGGC 59 NA Mus musculus 50 Cacna2d4 ENSMUSG00000041460 ENSMUST00000037434 1 1 1 80 6 119221958 119224252 GCAACAATAAAGGCTACTACAC 59 119224293 119224311 TAAGCACATGCAGGTACTC 59 NA Mus musculus 50 Ppp2r2d ENSMUSG00000041769 ENSMUST00000041097 1 1 1 80 7 146060182 146061383 GAACAAGAGAATAAAGGCCG 58 146061426 146061444 AAACTCTGGCTCATGACTC 59 NA Mus musculus 50 Poldip3 ENSMUSG00000041815 ENSMUST00000058793,ENSMUST00000100375 2 2 2 85 15 82962037 82963021 GAGGAGGACATAGTTGAGC 59 82961970 82961988 AAGACAACTTCTGCTACCC 59 NA Mus musculus 50 Ammecr1l ENSMUSG00000041915 ENSMUST00000115808,ENSMUST00000048298 3 2 2 83 18 31935719 31938516 GCTAAGGAACAAGACTGGG 59 31938563 31938581 TTCACTGGTAATTGGAGCC 59 NA Mus musculus 50 Mettl8 ENSMUSG00000041975 ENSMUST00000112186,ENSMUST00000064905,ENSMUST00000112179 2 3 4 116 2 70831630 70856292 TTGAACACAACATGTGGGA 59 70820244 70831553 CAAACTTAACTTGCTCTTCTGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Zfp410 ENSMUSG00000042472 ENSMUST00000045931,ENSMUST00000110285 3 2 2 82 12 85663903 85663923 GACATTACTTGCTTATCCCTC 58 85663966 85666536 TGATTTGGAGTTTCATCTGG 57 NA Mus musculus 50 Pbxip1 ENSMUSG00000042613 ENSMUST00000038942 3 1 1 81 3 89252122 89252141 TGAAGTGGATGACTTTGAGG 59 89252185 89252610 CTCCTTCTTTCGTGACCTC 59 NA Mus musculus 50 Pigv ENSMUSG00000043257 ENSMUST00000062118 1 1 2 146 4 133221682 133225658 CTACAGGCACTCTTCAACC 59 133221554 133221572 AAACAGGAAGTGTTCAGCA 59 NA DesignNoJunction Mus musculus 50 Olfr78 ENSMUSG00000043366 ENSMUST00000060187 2 1 1 125 7 109894543 109894561 TCTCCTTGAGTAGAACTGC 58 109891471 109891489 ACCAATAAGCAGGAAGGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Olfr683 ENSMUSG00000044120 ENSMUST00000061284 3 1 1 60 7 112292269 112292289 GCAAGAATTATCAGGAACTGC 59 112292229 112292247 CATCACAGGAGAGTTTGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cxxc4 ENSMUSG00000044365 ENSMUST00000053048 2 1 1 221 3 133903563 133903581 AAGAGGCTCATCAACTGTG 59 133921102 133921121 AACAAGACATTAGTTTGCCC 58 NA DesignNoJunction, InUTR Mus musculus 50 BC030476 ENSMUSG00000044726 ENSMUST00000060894 2 1 1 117 15 34401231 34401250 CAAGTAACAGGTGGAAACAG 58 34401330 34402573 CTGTCTCACCTTCAATGTG 58 NA Mus musculus 50 Syt16 ENSMUSG00000044912 ENSMUST00000110451 1 1 3 84 12 75323818 75330212 AGGTCAATGATTTGGATCGA 59 75330259 75330277 TGTGGGAGAATGGAAATGG 59 NA Mus musculus 50 1700025H01Rik ENSMUSG00000045272 ENSMUST00000061675 2 1 1 75 16 30200275 30200293 GACCTCTAGTAAGCCAGGA 59 30200332 30200350 TCTGTGAGCATTCTGTACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gprin3 ENSMUSG00000045441 ENSMUST00000051065 1 1 1 60 6 59303145 59303164 GACTCGAAGATCAATTTCCT 57 59303104 59303122 ATGTTGTCTCCCTTTAAGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 6430704M03Rik ENSMUSG00000045589 ENSMUST00000053681 1 1 2 142 4 56985244 56989802 AAGGGATGCTTCAGATACG 59 56985120 56985138 TCTGAAGAGAATCCAACCG 58 NA Mus musculus 50 Olfr1489 ENSMUSG00000045678 ENSMUST00000112921,ENSMUST00000053113 2 2 2 60 19 13707986 13708006 GTACTACTCTACCTCCATGAC 58 13708026 13708046 GATGTAAGAACCCACAATGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Whdc1 ENSMUSG00000045795 ENSMUST00000055230,ENSMUST00000063385,ENSMUST00000085099 1 3 3 80 7 88730089 88730108 GAGACTCTGCAGCTTATGAG 59 88730149 88731031 AAGATCTTCCACCTTTCTCTG 59 NA Mus musculus 50 Gpr158 ENSMUSG00000045967 ENSMUST00000055946,ENSMUST00000102949 3 2 2 80 2 21320985 21321003 GACATTGACCAATGTTCGA 58 21321047 21474937 GATTGGCATACACTCTGAG 57 NA Mus musculus 50 Dppa3 ENSMUSG00000046323 ENSMUST00000049644 3 1 1 296 6 122576610 122576628 GACGCTTTGGATGATACAG 58 122579345 122579936 CCGTTCAAACTCATTTCCT 57 NA DesignRelaxed Mus musculus 50 4930474M22Rik ENSMUSG00000046390 ENSMUST00000049726 1 1 1 114 17 14535751 14535769 TATTGTGGGTCAGACACTC 58 14526432 14527473 ACTGACAGTCTGATTCTCC 58 NA Mus musculus 50 Gjb4 ENSMUSG00000046623 ENSMUST00000060419,ENSMUST00000106090 3 2 2 60 4 127029341 127029359 GTGGTGTGAACAAGTACTC 57 127029299 127029318 AAGATGAAGACCACAGACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2010001J22Rik ENSMUSG00000047394 ENSMUST00000049968 3 1 1 90 15 89208569 89208587 ACTTACTCCATCTACAGCC 58 89208270 89208288 GATTCACTACGTGGTAGGC 59 NA DesignNoJunction Mus musculus 50 Rd3 ENSMUSG00000049353 ENSMUST00000053463 2 1 1 145 1 193807394 193807412 ATGTATGTGCCAAGATCCA 58 193809171 193809189 CTGCTTCATCTTCTCCAGG 59 NA DesignNoJunction Mus musculus 50 Defb20 ENSMUSG00000049560 ENSMUST00000061584,ENSMUST00000109836 3 2 2 61 2 152305156 152305174 TGGAGATATCTGAGATGGG 57 152305198 152305217 GTTCTCCAGCTCATTAACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 V1ri8 ENSMUSG00000049669 ENSMUST00000054679 3 1 1 157 13 22236548 22236566 TATCTTCACAGCTCCAGGT 59 22236409 22236427 AGTATTGTGGAGTCGTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lig4 ENSMUSG00000049717 ENSMUST00000095476 3 1 1 60 8 9971247 9971267 TTAGGTATTACAGCCCTTGAG 58 9971207 9971225 CAGATAAGCAGGAAACCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lgr4 ENSMUSG00000050199 ENSMUST00000046548,ENSMUST00000111037 2 2 2 80 2 109844716 109844735 AGCGTAATCAAATCTCCCTG 59 109844773 109846677 GGTTTCTACTCAGATCTAGAATCC 59 NA Mus musculus 50 4930470H14Rik ENSMUSG00000050459 ENSMUST00000062637 1 1 1 149 17 4044951 4071696 CAATGCTTGGAAAGAAGGAG 59 4044821 4044839 ATTTACACTCACGTCACCA 58 NA Mus musculus 50 1700019N12Rik ENSMUSG00000050623 ENSMUST00000057716 2 1 1 80 19 6997143 6997803 AAAGCCCTCATCACATATAGG 59 6997083 6997101 GATCCCTTCGATGTATCCC 58 NA Mus musculus 50 Hist1h2ba ENSMUSG00000050799 ENSMUST00000052776 3 1 1 82 13 24025876 24025895 ATAAGGTGCTGAAACAAGTG 58 24025813 24025831 GATGTCTGTCACAAAGGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Hist2h2bb ENSMUSG00000050936 ENSMUST00000051089 2 1 1 60 3 96073793 96073812 TTTACGTGTACAAGGTCCTG 59 96073834 96073853 ATAGCCTTAGATGAGATGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp169 ENSMUSG00000050954 ENSMUST00000050188,ENSMUST00000110110 1 2 2 134 13 48594153 48594171 CTATAGCCACCTTGTCTCC 58 48586747 48593694 AATTCTGTCCTGGGTTCTG 59 NA Mus musculus 50 Ttc24 ENSMUSG00000051036 ENSMUST00000050258,ENSMUST00000064550 1 2 2 94 3 87874310 87874328 ACAACCCATCTTCCATCTG 59 87874022 87874252 GTGGATGACCTACTGACTC 58 NA Mus musculus 50 P4ha3 ENSMUSG00000051048 ENSMUST00000057023,ENSMUST00000077908 3 2 2 118 7 107446456 107446474 GAAGCTGTCAGTCTCTTCC 59 107446554 107449163 CATGAAACATTTCCTACCTGG 58 NA Mus musculus 50 1700014D04Rik ENSMUSG00000051054 ENSMUST00000055343 1 1 1 60 13 59843713 59843732 ACAAGATAGAAACCACAGAC 57 59843672 59843690 ACATGTAAGAGGGTGAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 BC024868 ENSMUSG00000051403 ENSMUST00000058444 2 1 1 80 7 20120451 20120851 TTAGATGAGGATGGTGCCT 59 20120389 20120409 GTTGAAAGAGATGTTGAGGTG 59 NA Mus musculus 50 4930544M13Rik ENSMUSG00000051758 ENSMUST00000063230 1 1 1 83 13 115399197 115401613 GAAGAGTTATTTCACAGGATGC 59 115401657 115401675 TTAATCCATCTGGGTCACC 58 NA Mus musculus 50 Gprin2 ENSMUSG00000051843 ENSMUST00000063372 1 1 1 60 14 35003268 35003286 CTATCACTCCAAACCGGAG 59 35003226 35003244 ATGGCCTAAGGGAAATACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Dnahc10 ENSMUSG00000051869 ENSMUST00000037065 3 1 1 193 5 125257652 125258193 ATGGATTACAAGGCTGTCG 59 125259464 125259482 GAGTCAAGGGAGATCTCCT 59 NA DesignNoJunction Mus musculus 50 D630004N19Rik ENSMUSG00000052467 ENSMUST00000064334 3 1 1 60 7 107694794 107694812 TAACACATGAGTCTTCCCT 57 107694752 107694771 ATTACAGGACTTCTTAGCCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnt2 ENSMUSG00000052726 ENSMUST00000060201,ENSMUST00000086355 1 2 2 80 1 142323558 142325395 CCAAGACTACAGGATTATTACG 58 142325435 142325454 TGGAATCTGTAGTACTCTCC 57 NA Mus musculus 50 Senp7 ENSMUSG00000052917 ENSMUST00000089362,ENSMUST00000089360,ENSMUST00000049128,ENSMUST00000049097 3 4 4 106 16 56111905 56123898 TTTATCCGAAAGGACACCC 59 56123968 56123986 TATCACTCAAACTGGCCTC 58 NA Mus musculus 50 Olfr1013 ENSMUSG00000053287 ENSMUST00000065626 3 1 1 60 2 85610150 85610168 ACCTATCATTCCTGGACCT 59 85610191 85610210 CAGGTTTCTAGGATCTTTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Dis3l2 ENSMUSG00000053333 ENSMUST00000065694,ENSMUST00000065624 2 2 2 80 1 88751021 88753705 CAGAAATCAGCAAAGGTGG 59 88753749 88753767 ATCAGCCAAGAGTTTCAGG 59 NA Mus musculus 50 Cstf2t ENSMUSG00000053536 ENSMUST00000066039 2 1 1 60 19 31158773 31158791 AGGTCCCATGATAGATCAG 57 31158815 31158833 TCGAGATTCTCTACCTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Klk1b26 ENSMUSG00000053719 ENSMUST00000048945,ENSMUST00000076835 1 2 2 93 7 51271517 51271631 ATTACACCCACAAGATGGC 59 51271688 51271706 TCTGTAGGTAGACTTTGGC 58 NA DesignNoJunction Mus musculus 50 Ppfia2 ENSMUSG00000053825 ENSMUST00000029404 1 1 1 80 10 106364851 106364869 AGAAACATTACCAGCTGGA 58 106364913 106366122 CTTGATGAAGCAACGTCTG 59 NA Mus musculus 50 Actn4 ENSMUSG00000054808 ENSMUST00000068045 1 1 1 80 7 29703740 29703758 CAATGTAAACAAAGCCCTG 57 29701253 29703696 CCATCCACAATCTCTTCTG 57 NA Mus musculus 50 Pcnxl3 ENSMUSG00000054874 ENSMUST00000113615,ENSMUST00000068169 3 2 2 88 19 5678703 5678722 CTCTTCTCAGTCTTCTGTGG 59 5677717 5678652 ACTAGAGACCAGAGAACGG 59 NA Mus musculus 50 Nfic ENSMUSG00000055053 ENSMUST00000078185 1 1 5 247 10 80867748 80870312 GACATAGAAGGAGGCATCG 59 80866124 80866142 TAATCCCACAAAGGGACTG 58 NA DesignRelaxed Mus musculus 50 4931431C16Rik ENSMUSG00000055061 ENSMUST00000068438 1 1 1 264 5 35930322 35930340 TACTCAACACTCACAGAGC 58 35925980 35925998 TTGTAGTGTCTGAGGACTG 58 NA DesignNoJunction, InUTR Mus musculus 50 Stam2 ENSMUSG00000055371 ENSMUST00000100092 3 1 4 68 2 52595289 52595307 TTACATCCCTGCTACATCC 58 52595239 52595258 GATGTCAGAGTTAGGGACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 A030004J04Rik ENSMUSG00000056270 ENSMUST00000070284 3 1 1 61 3 91927106 91927124 AAATGTCCACAACAAGCTC 58 91927063 91927081 TTTCCTTGGCTTAACTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Higd1c ENSMUSG00000056487 ENSMUST00000075675,ENSMUST00000108953 2 2 3 80 15 100205379 100205397 TGTCCCTTCATCTCATCCA 59 100205437 100214172 TAGAGTAGAGAACACCTAGAGTC 59 NA Mus musculus 50 Olfr512 ENSMUSG00000056946 ENSMUST00000074730 3 1 1 60 7 115857366 115857385 GATGAGTACTCTACAGACCA 57 115857408 115857426 AATTTCCTTGTGGTCACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ero1lb ENSMUSG00000057069 ENSMUST00000071973 3 1 1 81 13 12671497 12671515 AAAGACTGTCATGTGGAGC 59 12672671 12673945 CTTGCGAGTACTTATTTGAACG 59 NA Mus musculus 50 Chd6 ENSMUSG00000057133 ENSMUST00000068072 1 1 3 89 2 160867779 160867797 GTTTAGAGCTGGACCACAG 59 160867503 160867726 GAAGACTCCTACTCTGGCT 59 NA Mus musculus 50 V1rg3 ENSMUSG00000057161 ENSMUST00000075053 1 1 1 60 7 12778952 12778970 AGTCAAGCATATCCACAGG 59 12778994 12779012 CATGGCTCTGATTTCAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr182 ENSMUSG00000058396 ENSMUST00000079692 2 1 1 60 10 127187912 127187930 GGTGATATGTGTCAACTGC 58 127187870 127187888 GAGGATGTACAGGTTCAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr968 ENSMUSG00000058532 ENSMUST00000075928 1 1 1 60 9 39579998 39580017 TATGTTGCCATTTGTAAGCC 58 39579957 39579976 AGGAACAAACTTGATAGGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr846 ENSMUSG00000058692 ENSMUST00000078774 1 1 1 95 9 19164937 19164955 CCCTCAAATGTTGAACCCT 59 19164860 19164878 CAGGGAAGTCTTGATTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000058898 ENSMUSG00000058898 ENSMUST00000082239 3 1 1 65 15 7079085 7079103 TGCATTACCTAAACTGCCC 59 7079038 7079056 CCCTCACCAAGAAAGTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 9630013D21Rik ENSMUSG00000059027 ENSMUST00000084362 3 1 1 173 4 109329056 109329074 GAGCCATCCAGAGAAATCC 59 109325698 109326633 CAAGGTCTTTCAAGAGAATCAG 58 NA InUTR Mus musculus 50 Rp2h ENSMUSG00000060090 ENSMUST00000115391,ENSMUST00000115387,ENSMUST00000033372,ENSMUST00000115392,ENSMUST00000067979 3 5 5 91 X 19954597 19954618 CAGTGATGAATCATGTCTTGTG 59 19954670 19958846 AGCCTTTACCAACCATCTC 59 NA Mus musculus 50 BC002059 ENSMUSG00000060149 ENSMUST00000071374 2 1 1 60 17 17110234 17110254 AGAAACCCTATGAATGTGACC 59 17110276 17110294 TCTTGAAGATAGCCGTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC066028 ENSMUSG00000060314 ENSMUST00000080651 1 1 2 80 7 147994035 147997399 TTTGCCATGAATCCTCCTG 59 147993973 147993991 TTACACGCAGTTATCCCAC 59 NA Mus musculus 50 Hrasls3 ENSMUSG00000060675 ENSMUST00000025925 1 1 1 90 19 7653705 7660065 GTGATCAGGTCAGAGATGC 59 7660119 7660137 TTTCTGGAGAGCATGACTC 58 NA Nonspecific Mus musculus 50 EG245190 ENSMUSG00000060814 ENSMUST00000078533 1 1 1 67 7 106774217 106774235 CTCTTACGTCTTCTTCGGG 59 106774168 106774186 TTAGGTAGAGCACCATGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC062115 ENSMUSG00000061371 ENSMUST00000085664 3 1 2 124 10 81522688 81523045 CAGAAGAATTCATACTGGAGAG 57 81523127 81523148 GACTACATTCATAGGGTTTCTC 57 NA Nonspecific Mus musculus 50 2010003H20Rik ENSMUSG00000061531 ENSMUST00000077517 2 1 1 108 2 14117627 14117645 TGATCTGCCAGTATCTCTG 58 14117716 14140511 GTCATTGTCTTCATAACCCT 57 NA Mus musculus 50 Lyg2 ENSMUSG00000061584 ENSMUST00000078307 3 1 1 92 1 37965774 37965794 AGTCTGTTGGGATTCTAACAG 59 37964509 37965720 CAGTCAGACCACCTTTCAG 59 NA Mus musculus 50 Sphk1 ENSMUSG00000061878 ENSMUST00000106388,ENSMUST00000106387,ENSMUST00000100201,ENSMUST00000106386,ENSMUST00000063396,ENSMUST00000063446,ENSMUST00000100200 2 7 8 110 11 116396299 116396397 TAAACTGATACTCACCGAACG 59 116396469 116396487 TCATGCATCAGACCATCAC 59 NA Mus musculus 50 Hsh2d ENSMUSG00000062007 ENSMUST00000072097 3 1 1 96 8 74722301 74722320 TCCTATACTCAAATGCCCTG 58 74722379 74724186 CTTTCAGAAGCCTCCTCAG 59 NA Mus musculus 50 Olfr285 ENSMUSG00000062037 ENSMUST00000079736 3 1 1 60 15 98143891 98143909 TACTCTTTGTGGCTTTCCT 58 98143849 98143867 AGAATCATGGTGTTCCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Scfd2 ENSMUSG00000062110 ENSMUST00000072857,ENSMUST00000113542,ENSMUST00000075848 3 3 3 80 5 74858751 74878184 ATGAGTATGGGAAGAGTCAC 58 74858690 74858709 ATTTCTAAGAGCTCTGAGGT 57 NA Mus musculus 50 NM_001081019.1 ENSMUSG00000063314 ENSMUST00000073990 1 1 1 60 4 94266835 94266854 TTAACAGCCACTAAATGGTG 58 94266875 94266895 GTGAATGGATGGAATCTACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rnf183 ENSMUSG00000063851 ENSMUST00000107455,ENSMUST00000079420,ENSMUST00000107454 2 3 3 139 4 62091524 62091542 TTTCAGTACCTGGTACAGC 58 62089527 62089545 TGTTGTTGAAAGGGTTCCA 59 NA DesignNoJunction, InUTR Mus musculus 50 mmu-let-7a-2 ENSMUSG00000065614 ENSMUST00000083680 2 1 1 61 9 41344809 41344827 CCAGGTTGAGGTAGTAGGT 59 41344852 41344870 AGGCTGTACAGTTATCTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 NM_001039233.2 ENSMUSG00000066012 ENSMUST00000084161 2 1 1 96 4 146035634 146035652 TAACAGAACGTTCCAAAGC 58 146035712 146035730 CCTCGCACCTGATAATCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Prpf4 ENSMUSG00000066148 ENSMUST00000084524 2 1 1 84 4 62080325 62080346 AGATATTGAAGGCCATACAGTG 59 62080391 62083221 ACGGTCATAACAGGTTGTG 59 NA Mus musculus 50 Olfr834 ENSMUSG00000066910 ENSMUST00000086492 1 1 1 60 9 18793203 18793223 GTGTTTATTTGAGCTCTGCTG 59 18793245 18793263 ATCACAGAGGCTATAGCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Eif1ay ENSMUSG00000067194 ENSMUST00000087143 2 1 1 87 X 155815468 155815487 CACATCAGAGGGAAATTGAG 58 155816511 155817671 CTTTGTTGTCCTGGTAATCTC 58 NA Mus musculus 50 Capn6 ENSMUSG00000067276 ENSMUST00000087316 2 1 1 80 X 140242141 140242396 CCTGGAGTGAAATTTCAGAG 58 140242080 140242101 CATCATCAGACATAACAAGTCC 58 NA Mus musculus 50 Bmpr2 ENSMUSG00000067336 ENSMUST00000087435 2 1 1 81 1 59909276 59916025 CTCTTCCCAGGTGAATCTG 59 59916069 59916088 GCATATCCTCAAATGTGGGA 59 NA Mus musculus 50 EG331529 ENSMUSG00000067359 ENSMUST00000113173,ENSMUST00000087492 3 2 2 80 X 131914582 131914600 GTATGAACCACCTGAAGGA 58 131914642 131915238 CAGATAGTACTCTCAGGACAG 58 NA Nonspecific Mus musculus 50 OTTMUSG00000016070 ENSMUSG00000067745 ENSMUST00000088383 1 1 1 125 2 161041952 161041970 CACAGAATAGTGGCAGGAG 59 161042059 161042077 AGACCAGAGTCCTACTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Myl9 ENSMUSG00000067818 ENSMUST00000088552 2 1 1 70 2 156604423 156604442 TCATTGATAAGGAGGACCTG 58 156606228 156606246 CTCCAGATACTCGTCTGTG 58 NA DesignNoJunction Mus musculus 50 NP_001018073.1 ENSMUSG00000067924 ENSMUST00000088778 3 1 1 61 X 50972607 50972626 AAATGATCTGGACTCACCTG 59 50972565 50972583 GTGAATCAATGTCCATGGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 NP_001106895.1 ENSMUSG00000068250 ENSMUST00000111535 1 1 1 80 6 149119400 149119420 GTGTCCTTACATGCATTAGGA 59 149118012 149119358 ACCATTGTCAGATACCTGC 59 NA Nonspecific Mus musculus 50 OTTMUSG00000002200 ENSMUSG00000069718 ENSMUST00000092695 1 1 1 65 11 99519771 99519789 CTTGTGTCATCTCCACCTG 59 99519724 99519742 AAGAAAGTTCTCAGCAGCA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Olfr59 ENSMUSG00000070374 ENSMUST00000080504 3 1 1 62 11 74102299 74102317 CACTGATGTACGACTCCAC 59 74102343 74102361 ATGTCAACACAGGAAAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr311 ENSMUSG00000070435 ENSMUST00000071625 1 1 1 60 11 58655078 58655099 CAGCCTTCCATACATTTAACAC 59 58655120 58655138 TGATCAACAACATTGGGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 1700049G17Rik ENSMUSG00000070709 ENSMUST00000050485,ENSMUST00000076770 3 2 3 188 7 28714416 28714434 TTTGCTGGTGATAACTGCA 59 28711415 28712423 AAATGTCACTGACCCACAG 59 NA InUTR Mus musculus 50 Vmn2r30 ENSMUSG00000070845 ENSMUST00000086287 1 1 1 177 7 9355331 9355350 AAACTGTAACACCTACACCA 58 9355490 9363577 TAAGCTGAAGGATACGCAG 59 NA Nonspecific, InUTR Mus musculus 50 Zfp352 ENSMUSG00000070902 ENSMUST00000107129,ENSMUST00000107130,ENSMUST00000094971 3 3 3 60 4 89891284 89891303 TGACTTTCAGACACAAACCT 59 89891326 89891344 TCTTGTCCTCTTAGACCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem139 ENSMUSG00000071506 ENSMUST00000095987 1 1 1 63 6 42213954 42213974 GAAGAATTCTTCGACTTAGGG 58 42213999 42214017 CTCATGCTTTGCAGATCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 4930505N22Rik ENSMUSG00000071539 ENSMUST00000096033 1 1 1 60 19 46072047 46072067 TCACTCTGTCCTAAATCATGG 59 46072088 46072107 TGATTTCAGTGTACCTCACC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 EG238829 ENSMUSG00000071738 ENSMUST00000096389 1 1 1 60 X 73512487 73512506 TCTTTCGAATGTGCATATGG 58 73512528 73512547 AAGTCTAAATGGATTGCAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Vmn2r122 ENSMUSG00000072049 ENSMUST00000071277 3 1 5 122 X 121245865 121245883 TAATGCTGTTTATGCTGCG 58 121243550 121245780 CATACAGAGGATGGAACCTG 59 NA Mus musculus 50 Phf20l1 ENSMUSG00000072501 ENSMUST00000048188,ENSMUST00000110088,ENSMUST00000100574 3 3 4 90 15 66411741 66426379 TACAGAAATGGTATCCATCCC 58 66426431 66426449 TCATATCGATGACTCCAGC 58 NA Mus musculus 50 Rybp ENSMUSG00000072872 ENSMUST00000101118 3 1 1 74 6 100181168 100181186 TCTTAGTTCTAGGGTTGCG 58 100181112 100181130 CACCACAGAGGATGTAGAC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 ENSMUSG00000072884 ENSMUSG00000072884 ENSMUST00000101131 3 1 1 80 12 101427131 101427149 ACTTGTTCATGTCAAGCCA 59 101427192 101430257 GTTGGAAACCCAAGAATTCC 59 NA InUTR Mus musculus 50 ENSMUSG00000073487 ENSMUSG00000073487 ENSMUST00000097456 2 1 1 61 1 180117515 180117534 TTCACCAGGATATTGTAGGC 59 180117473 180117491 CAGGACTTTCTGGGAACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ifi204 ENSMUSG00000073489 ENSMUST00000000264,ENSMUST00000111214 2 2 2 66 1 175679360 175679378 CTTCCACTGAAGATGGGTG 59 175677738 175679330 CTAGCATTGATGACCTGCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000073742 ENSMUSG00000073742 ENSMUST00000097833 1 1 1 73 1 3670753 3670771 GAAATACAGACTGACTGGG 57 3670808 3670826 ATATTGTCAGCACTGAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1331 ENSMUSG00000073769 ENSMUST00000106360,ENSMUST00000094831 2 2 2 60 4 118541827 118541846 CAGGGTCTTGTATTTGTGGT 59 118541867 118541887 AGACTCATGGTGAAGAAAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ccl27 ENSMUSG00000073888 ENSMUST00000108032 1 1 6 158 4 41720629 41720647 ATTGAGGAGATACGAGGTG 58 41720164 41720182 GACAAACAGCTCATTAGGC 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Olfr632 ENSMUSG00000073938 ENSMUST00000098189 3 1 1 60 7 111086037 111086056 ACTATCTTGCATCTGGTTCG 59 111086079 111086097 CCAGGAAGTAGTACATGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 B3gnt6 ENSMUSG00000074004 ENSMUST00000098278 1 1 1 73 7 105342236 105342254 CTTATCCTTGGATCCCTGC 59 105342181 105342199 TGAGCAGCATCTCATAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001094088.1 ENSMUSG00000074046 ENSMUST00000082166 2 1 1 78 8 125365799 125365817 AAGAAACTAGTGAAGGCGT 58 125365859 125365877 GTACTTCTCCGTATTCTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074128 ENSMUSG00000074128 ENSMUST00000087562 2 1 1 69 8 106701849 106707759 AAGCATAAAGGCTGGAGAG 59 106701798 106701816 TAAACTCAGGACCTCTGGA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Pira7 ENSMUSG00000074417 ENSMUST00000108615,ENSMUST00000071671 2 2 5 143 7 3795778 3795943 GGTGACAGAAGACTACTGG 59 3795653 3795671 GAGAACTTCTGTGGTCCTG 59 NA Mus musculus 50 Sprr2a ENSMUSG00000074445 ENSMUST00000090872 1 1 1 71 3 92092968 92092986 TGCTTTCCTGGCTATACTG 59 92093021 92093039 AGATACCTGTTGTGCTTCC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Etohi1 ENSMUSG00000074521 ENSMUST00000108935,ENSMUST00000099001,ENSMUST00000108936 1 3 3 80 2 177639050 177639070 GATGCTTCTCAGAAGAGTCTC 59 177639110 177639337 TTCCCAACTGTAACCTATAGC 59 NA Nonspecific Mus musculus 50 EG633640 ENSMUSG00000074634 ENSMUST00000109199,ENSMUST00000099147 2 2 2 73 13 120281806 120283944 GATCCCTATCTTTACAGGCC 59 120283980 120283998 GATGGGTATCACAGTGGAG 59 NA DesignNoJunction Mus musculus 50 Olfr1275 ENSMUSG00000074966 ENSMUST00000099620 1 1 1 60 2 111071712 111071731 TTTCTACCTCAACAGTTCCT 58 111071671 111071691 GAAATGATACTGTGACCTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lrrc55 ENSMUSG00000075224 ENSMUST00000099930,ENSMUST00000111601 1 2 2 80 2 85030158 85032075 GAGATTTGACACAGATCTTTGG 59 85030099 85030120 TTCTCAGATCCTTCAGTTTCTC 59 NA InUTR Mus musculus 50 Oxct2a ENSMUSG00000076436 ENSMUST00000102640 2 1 1 75 4 122999461 122999479 TTGAAGAAATGCACCATGC 59 122999404 122999422 CTTCAAACACTGCCTTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV1-133 ENSMUSG00000076503 ENSMUST00000103304 1 1 1 204 6 67674944 67675348 CTCTGGATTCAGGAAACCA 58 67675516 67675534 AGTCCAGTTTAGACACCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-86 ENSMUSG00000076536 ENSMUST00000103337 1 1 1 170 6 68860694 68860897 AATCAGTGTCACAGTGTCC 59 68860542 68860561 TCATAAATCCATGGTTTGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-56 ENSMUSG00000076557 ENSMUST00000103358 3 1 1 60 6 69537530 69537548 AATCATGTCTGCATCTCCA 58 69537488 69537506 TACACTTGAGATGGCACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV3-3 ENSMUSG00000076601 ENSMUST00000103402 2 1 1 60 6 70637264 70637282 CTGTGTCTCTAGGACAGAG 58 70637304 70637324 TTATAATCGACACTCTGGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHG1 ENSMUSG00000076614 ENSMUST00000103419,ENSMUST00000103420 1 2 3 80 12 114567946 114568067 TGCATATGTACAGTCCCAG 58 114567884 114567902 AGTCAGAGTAATGGTGAGC 58 NA Mus musculus 50 IGHV9-4 ENSMUSG00000076673 ENSMUST00000103482 1 1 1 60 12 115538220 115538238 CAGCACTGCCTATTTACAG 58 115538178 115538196 ACAGAAATACGTAGCCGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV2 ENSMUSG00000076759 ENSMUST00000103568 3 1 1 73 14 53186998 53187447 CTGATCTTGGTCTCATGGA 58 53187484 53187502 ACTTCTTGCCCTTCATAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV14D-2 ENSMUSG00000076787 ENSMUST00000103597 1 1 1 60 14 53568700 53568718 CTCCTGATAGCCATACGTC 59 53568742 53568760 AGAAGATTGTGAATCGTCC 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRAV8D-2 ENSMUSG00000076821 ENSMUST00000103632 3 1 1 172 14 53965670 53965815 TATGGTTTCAAGTGGCCTG 59 53965949 53965969 TATTAAGATTAGCTGGGCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-743a ENSMUSG00000077127 ENSMUST00000103939 1 1 1 60 X 64029974 64029992 TGTATTCAGATTGGTGCCT 58 64029932 64029950 TACTCTACTCAGCTTGGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001074766.1 ENSMUSG00000078370 ENSMUST00000082064 1 1 1 61 12 71021745 71021763 TTCCTACCCGAAATGTGTC 59 71021702 71021720 ATACTTGGCGTGTTTCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2A7I1_MOUSE ENSMUSG00000078497 ENSMUST00000105722 2 1 1 67 4 146759403 146762442 CTGCACAGTGTCTATTAACC 58 146762472 146762490 GAGACATTCCCATTCCTCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Rex2 ENSMUSG00000078499 ENSMUST00000116265 2 1 3 67 4 145881337 145884364 CTGCACAGTGTCTATTAACC 58 145884394 145884412 GAGACATTCCCATTCCTCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 NP_001078973.1 ENSMUSG00000078505 ENSMUST00000105747 3 1 1 100 4 144263715 144264439 GTAGCCTGGACATTTACCA 58 144260587 144260605 GTGATGATGCTTAGGAAGC 58 NA Mus musculus 50 NP_001092779.1 ENSMUSG00000078575 ENSMUST00000106265 3 1 1 121 4 121288290 121288309 GAATAAAGTCCTGGATGCCT 59 121286875 121288206 TTCAGGAACAACACAGGAG 59 NA Mus musculus 50 Zfp697 ENSMUSG00000078633 ENSMUST00000097147 1 1 1 281 3 98215032 98215051 CTGAGTCAGAACCTCAAGAC 59 98215295 98215313 AATCCAATCTCACGGAACC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ccl19 ENSMUSG00000078738 ENSMUST00000108010 2 1 1 60 4 42250155 42250261 CTTCTGCCAAGAACAAAGG 58 42250282 42250303 CATCTCTTTACTCAAGACACAG 58 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 EG545477 ENSMUSG00000078998 ENSMUST00000109753 1 1 1 80 2 153812968 153814949 CAATTTCCCAGGGATACTCTC 59 153814991 153815009 ATCTGTTGCAATTGCAAGG 59 NA Mus musculus 50 A130010J15Rik ENSMUSG00000079144 ENSMUST00000016334,ENSMUST00000072780,ENSMUST00000110831,ENSMUST00000069054 3 4 4 60 1 195000955 195000976 TCGAGGACTTAAGAAAGATGTG 59 195000997 195001015 GTCTGAGGAATGTAGCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG622640 ENSMUSG00000079394 ENSMUST00000112787 2 1 1 62 14 4103577 4103595 TTGGTTCCATGCAGTACTC 59 4103621 4104312 CCTCCTTAATGCTGTAGGA 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Mthfs ENSMUSG00000079427 ENSMUST00000113110 2 1 1 60 9 88610459 88610478 AAATCTGCTTCATCCCTCAG 59 88610418 88610436 GTTAACCTCACCATGTCCA 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 NP_001075139.1 ENSMUSG00000079531 ENSMUST00000114116 1 1 1 199 X 72084244 72086157 ATCATCCAGAAGGATAAGCG 59 72086319 72086337 CATGGTGACTGAACTCTGG 59 NA Nonspecific, InUTR Mus musculus 50 Gpr45 ENSMUSG00000079587 ENSMUST00000055874 3 1 1 99 1 43010423 43010441 CACCACCATTTCTGATCGT 59 43010501 43010522 GATGTAAAGGAAATGGTCTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 NM_001098841.1 ENSMUSG00000080129 ENSMUST00000105557 1 1 1 60 4 88434977 88434995 TATCTGAAGGCAAAGGCAC 59 88435019 88435037 CTTGCAATTGGACTCTGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Axin2 ENSMUSG00000000142 ENSMUST00000052915,ENSMUST00000106712,ENSMUST00000106711 2 3 3 100 11 108807280 108807298 TTCCATACAGGAGGATGCT 59 108807359 108810601 CGCCTTCTTGAAATAATACCTG 59 NA Mus musculus 50 Axin2 ENSMUSG00000000142 ENSMUST00000052915,ENSMUST00000106712,ENSMUST00000106711 1 3 3 99 11 108805912 108807204 CCAGAAGATCACAAAGAGC 58 108807266 108807285 ATGGAATTTCTTCTCCACAG 57 NA Mus musculus 50 Oprm1 ENSMUSG00000000766 ENSMUST00000078634 1 1 21 60 10 3516044 3516062 GGATCGAACTAACCACCAG 59 3513983 3514002 TTTGAAGCTCAGTTTAGGGT 59 NA DesignNoJunction Mus musculus 50 Expi ENSMUSG00000000983 ENSMUST00000001009 1 1 1 116 11 83523404 83523422 CTTGTGATGAACGATGCAC 59 83524658 83524676 AGATCCATCTTCCACATGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Gramd1a ENSMUSG00000001248 ENSMUST00000085636 1 1 2 80 7 31920664 31920683 CAGGACTACTTCTACACTGC 59 31919340 31920621 GAGTTCTCGATCTCGAAGC 59 NA Mus musculus 50 Klhl10 ENSMUSG00000001558 ENSMUST00000001599,ENSMUST00000107395 1 2 2 82 11 100317734 100317890 AACATGTATACGCAGTGGG 59 100317936 100317954 CCAAGTATTAGCCACTGGG 59 NA Mus musculus 50 Evx2 ENSMUSG00000001815 ENSMUST00000111990,ENSMUST00000001867 2 2 2 60 2 74497433 74497454 AGATGATTCTGATGGAAAGAGG 59 74497394 74497412 AAACTGGAGAACCTCTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ltbp2 ENSMUSG00000002020 ENSMUST00000110254 3 1 2 81 12 86145355 86145374 CCCAAATGGATACAGATGTG 58 86140428 86145314 ACACTCATCGATATCAGTACAG 59 NA Mus musculus 50 Acp2 ENSMUSG00000002103 ENSMUST00000099722 2 1 2 171 2 91048434 91048453 ATGTACTTTCGGAATGACAG 57 91048587 91051153 ATCTCAAGTCCTCTGTGTC 58 NA Mus musculus 50 Kcnn1 ENSMUSG00000002908 ENSMUST00000110081,ENSMUST00000110080,ENSMUST00000110078 3 3 4 92 8 73378613 73378911 GTATACACCAAGGAGTCACTC 59 73378541 73378559 GTGGTACAGGATGACAAGG 59 NA Mus musculus 50 Dll3 ENSMUSG00000003436 ENSMUST00000050191,ENSMUST00000108315,ENSMUST00000094650 2 3 3 154 7 29081520 29083546 AGCTGTAGTGAAACCTCTG 58 29081384 29081402 CAGACATAGGCAGAGTCAG 59 NA Mus musculus 50 Pde1c ENSMUSG00000004347 ENSMUST00000044505 1 1 3 81 6 56041404 56041422 CAAAGAAGCGTTCTCATGG 59 56022354 56041359 AAAGGAGGCTTGATGACTG 59 NA Mus musculus 50 Wwox ENSMUSG00000004637 ENSMUST00000109108,ENSMUST00000004756 1 2 3 115 8 116972135 116972153 CACCAGACAGAGATACGAC 59 116972232 117012809 CAGTCTCGAACCCTATTCC 59 NA Mus musculus 50 Arid3b ENSMUSG00000004661 ENSMUST00000004780,ENSMUST00000114165 1 2 4 129 9 57643916 57643934 AGATCAGAATCAACGGCAG 59 57640483 57642751 AACAGCACACCTGTATAGG 58 NA Mus musculus 50 Ly9 ENSMUSG00000004707 ENSMUST00000068878,ENSMUST00000111277 1 2 3 80 1 173535171 173535191 CTACCATGCTCAGATAAACCA 59 173532184 173535130 TGGAGCTTCTCATAGATGTG 58 NA Mus musculus 50 Ccdc130 ENSMUSG00000004994 ENSMUST00000098578,ENSMUST00000005120 3 2 2 84 8 86784577 86785650 TCCAATCTACAGGTTCAGGA 59 86784512 86784530 GACATAGTCACAGTTGGCA 59 NA Mus musculus 50 Eif2ak4 ENSMUSG00000005102 ENSMUST00000005233,ENSMUST00000110877 3 2 8 99 2 118226295 118226314 TTAGTTCTTTACCCTCAGGG 58 118226376 118230793 TTTCGGGAACTACATCTGG 58 NA Mus musculus 50 Itgae ENSMUSG00000005947 ENSMUST00000006101,ENSMUST00000102537 2 2 2 81 11 72929093 72929111 GTGACCAACTACTCAGCTC 59 72929155 72929596 CATCTCCAACTGTACCTTCC 59 NA Mus musculus 50 Zfp184 ENSMUSG00000006720 ENSMUST00000006903,ENSMUST00000102978 2 2 2 81 13 22042127 22042145 TGATTTCCCAACTAGAGCA 58 22042190 22050302 TTCTTCCAGTCTTCCAAGG 58 NA Mus musculus 50 A2bp1 ENSMUSG00000008658 ENSMUST00000096292,ENSMUST00000092375 3 2 4 112 16 7369902 7369920 ATCAAGAGCCAGTGTATGG 59 7376056 7392093 GACGAACTGATTTCTGTCAC 58 NA Mus musculus 50 Met ENSMUSG00000009376 ENSMUST00000115443,ENSMUST00000115442,ENSMUST00000080469 3 3 3 80 6 17476380 17476400 CTCCAGAAGTTATTGTTGAGC 58 17476439 17477088 GAATCTTGGTGATCTTCTTTCC 59 NA Mus musculus 50 Vipr2 ENSMUSG00000011171 ENSMUST00000011315 2 1 2 80 12 117381335 117381354 GTTATGTGTTGGTTCCTTCC 58 117381462 117382626 TTCAGTTCACACTGTACCTC 59 NA Mus musculus 50 Zfp296 ENSMUSG00000011267 ENSMUST00000108453,ENSMUST00000011411,ENSMUST00000116346 2 3 3 60 7 20165013 20165031 CTAGTCCTTGGAAGTTGCT 58 20165055 20165073 GTCTGGTAGATGCATAGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Evi5l ENSMUSG00000011832 ENSMUST00000043710,ENSMUST00000086778 3 2 2 80 8 4191367 4191591 TCTTTATGTATGAGGGACTGG 58 4191633 4191651 GTTGCATCAACTCTGTCTG 58 NA Mus musculus 50 Ptprs ENSMUSG00000013236 ENSMUST00000086828,ENSMUST00000067538,ENSMUST00000025037,ENSMUST00000113012,ENSMUST00000097302 1 5 5 127 17 56594395 56594413 GATCAGATTGGAGTGTCGG 59 56593741 56594304 AAGTCAATGGTCTCGAAGC 59 NA Mus musculus 50 Eps8 ENSMUSG00000015766 ENSMUST00000058210,ENSMUST00000111880,ENSMUST00000100841,ENSMUST00000111878 1 4 4 80 6 137486208 137487855 CTTCTCAACTGAATGGTTACG 58 137486148 137486167 CCTTTGCACTTGTTCTTGAG 59 NA Mus musculus 50 Prpsap1 ENSMUSG00000015869 ENSMUST00000106391,ENSMUST00000106390,ENSMUST00000021153 3 3 3 89 11 116341126 116347190 ATACCCAGAGATGTGAATACG 59 116341057 116341075 GACGCCAATGATATTCCTG 58 NA Mus musculus 50 Kcnq2 ENSMUSG00000016346 ENSMUST00000103051,ENSMUST00000103049,ENSMUST00000080022 1 3 10 84 2 180839649 180839667 CTACTAACCTCTCACGCAC 59 180838368 180839601 GTTTGTGAGCTGTACATGG 58 NA Mus musculus 50 5830472M02Rik ENSMUSG00000017679 ENSMUST00000109408,ENSMUST00000109405 3 2 2 90 2 163439500 163439518 TCACATAGTGAACGAACCT 58 163439572 163441107 GAGGAAGAACCTGTTAGCA 58 NA InUTR Mus musculus 50 Styxl1 ENSMUSG00000019178 ENSMUST00000053906,ENSMUST00000111163,ENSMUST00000111164,ENSMUST00000111161,ENSMUST00000085960 3 5 5 101 5 136229801 136231284 CTTTATAGAACTTCACCTCAGG 57 136229721 136229739 TAATGCATGAGTAAGGCCA 58 NA Nonspecific Mus musculus 50 Lhx9 ENSMUSG00000019230 ENSMUST00000093486,ENSMUST00000019374,ENSMUST00000112030 1 3 5 93 1 140729338 140729356 GCTATCAACCATAACCCAG 57 140725272 140729281 CCAAGATTTGTTCTCCCTG 58 NA Mus musculus 50 Gprc6a ENSMUSG00000019905 ENSMUST00000105478 3 1 2 110 10 51346317 51346336 TTATAGCATTCAGCTTGCAG 58 51336502 51346245 GATAGAATTTGCTCCCATGG 58 NA Mus musculus 50 Rufy2 ENSMUSG00000020070 ENSMUST00000020264 3 1 3 99 10 62462995 62463013 GCTATCAGTACAAGTTGGC 58 62463076 62463098 GTTGCCGAATATGAGAGTG 58 NA Mus musculus 50 Nfyb ENSMUSG00000020248 ENSMUST00000020482,ENSMUST00000105309 3 2 2 121 10 82215344 82217722 TCAAACAGGAAAGATCGCA 59 82215241 82215259 TGATTGTCTTCCGCTTCTC 59 NA Mus musculus 50 1700008A04Rik ENSMUSG00000020270 ENSMUST00000020508 2 1 2 117 11 32722115 32722133 TCATCTTGGTGCTCTACCT 59 32720678 32721856 TGATATTCAAAGCCCTGGG 59 NA Mus musculus 50 Tnip1 ENSMUSG00000020400 ENSMUST00000102731,ENSMUST00000018482,ENSMUST00000102730,ENSMUST00000108889,ENSMUST00000101203 2 5 8 168 11 54753236 54754231 CAAGGGATAAAGATGTTAGGG 57 54751556 54753106 TTGTATCCTGTCCTGTGAG 58 NA Mus musculus 50 Nup85 ENSMUSG00000020739 ENSMUST00000021085,ENSMUST00000106511 2 2 3 85 11 115439591 115439811 TCTCTGCAAGATCATGCTG 59 115439858 115439878 TCGTCACTAAGAAATGGTACC 59 NA Mus musculus 50 Rhbdf2 ENSMUSG00000020806 ENSMUST00000103028,ENSMUST00000103029 3 2 3 139 11 116462237 116462256 AGACTGTAAGATCAAAGGCC 59 116461797 116461926 TGTCTAAACAGTGCACCTG 59 NA Mus musculus 50 Krt36 ENSMUSG00000020916 ENSMUST00000007309 1 1 3 127 11 99964174 99964192 TGTTACTGGATGTCAAGGC 59 99963700 99963720 TAAGGTACTTACAGCAGGC 58 NA Mus musculus 50 Pygl ENSMUSG00000021069 ENSMUST00000110528,ENSMUST00000071250 1 2 2 87 12 71298096 71298219 ATAATTGGTGGCAAAGCTG 58 71298027 71298045 CATTGTTCACCACTTCTGC 59 NA Mus musculus 50 Lgmn ENSMUSG00000021190 ENSMUST00000110020,ENSMUST00000021607 2 2 2 81 12 103640141 103640160 TGGTGTTCTACATTGAAGCT 59 103638451 103640097 GCAGTAGTTGCATAAACGT 58 NA Mus musculus 50 Klc1 ENSMUSG00000021288 ENSMUST00000021717 2 1 4 87 12 113033768 113044652 GGATCTTTAAAGCGCAGTG 59 113044703 113044721 CCAAGACCCTACTAGAGGT 59 NA Mus musculus 50 Prl8a6 ENSMUSG00000021345 ENSMUST00000110355,ENSMUST00000018392,ENSMUST00000080762 1 3 3 133 13 27525036 27526034 GGATACTCACCAAGGTCTC 58 27524921 27524940 ATCTATGCAGTAGGAAAGGT 57 NA Mus musculus 50 Tcfap2a ENSMUSG00000021359 ENSMUST00000021787,ENSMUST00000080429,ENSMUST00000110193,ENSMUST00000110192 1 4 4 81 13 40818688 40820513 ACTGTAATTAAGAAAGGCCC 57 40818626 40818645 GGTTGTCCTTGTTAATAGGG 57 NA Mus musculus 50 Dpys ENSMUSG00000022304 ENSMUST00000022915,ENSMUST00000110306 1 2 2 80 15 39673515 39673533 TTTATACGTCGTGCATGTG 58 39659662 39673471 CCATAGACCACATTTCCTG 57 NA Mus musculus 50 Atad2 ENSMUSG00000022360 ENSMUST00000038194 3 1 2 81 15 57957694 57958111 ATAACAAACACTGCTGAAGC 59 57957632 57957650 CTTCAAGCTTCTTCATCCG 58 NA Mus musculus 50 Tef ENSMUSG00000022389 ENSMUST00000109553,ENSMUST00000052561,ENSMUST00000023024 2 3 3 109 15 81645596 81645614 AGCTTGAAGGAAAGGAGTC 59 81645687 81651642 TTCCAAGGACGATTCTGTG 59 NA Mus musculus 50 Trp63 ENSMUSG00000022510 ENSMUST00000115308,ENSMUST00000115305 2 2 6 83 16 25871209 25876723 CTTCAGAAACATCTCCTTTCAG 58 25876767 25876785 GAAGACGTCAGACTGTGTC 59 NA Mus musculus 50 Nudt16l1 ENSMUSG00000022516 ENSMUST00000050881,ENSMUST00000115846 3 2 2 134 16 4939573 4939591 CTGACATTGGAACAACTGC 59 4940246 4940264 CAGAAAGTTAGGAAAGCCG 58 NA DesignNoJunction Mus musculus 50 Ly6h ENSMUSG00000022577 ENSMUST00000065417 3 1 2 74 15 75395687 75395706 TTCTCAGACTATCTGATGGG 57 75395630 75395648 CACAAATCTTTCTCGCAGC 59 NA DesignNoJunction Mus musculus 50 Aifm3 ENSMUSG00000022763 ENSMUST00000115685,ENSMUST00000100128,ENSMUST00000023448 2 3 3 80 16 17500425 17500445 CTGCTTCAACATTAGTACTGG 58 17500487 17500596 TTCTCAATCTTCACCTGGA 57 NA Mus musculus 50 Dlg1 ENSMUSG00000022770 ENSMUST00000115207,ENSMUST00000023454 3 2 8 80 16 31743285 31743303 TCAGAGAAGAACCTGTCAG 58 31743346 31781876 AGGATTTGCCTTTATTGGTG 58 NA Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000114002,ENSMUST00000064797,ENSMUST00000116575,ENSMUST00000023678 3 4 16 81 16 91887699 91887718 AAGGCTACATCCATGAACTC 59 91887760 91889376 GGTTTCTGAAAGATCTCTGTG 58 NA Mus musculus 50 Enah ENSMUSG00000022995 ENSMUST00000078719,ENSMUST00000111025 3 2 4 106 1 183886697 183891897 TCAAGACCATCAGGTTGTG 59 183886609 183886627 GACCATACACCTGTCTAGC 59 NA Mus musculus 50 Enah ENSMUSG00000022995 ENSMUST00000078719,ENSMUST00000111025 3 2 4 106 1 183886697 183891897 TCAAGACCATCAGGTTGTG 59 183886609 183886627 GACCATACACCTGTCTAGC 59 NA Mus musculus 50 Ndufa5 ENSMUSG00000023089 ENSMUST00000023851 2 1 1 80 6 24472661 24472679 AAGCTGGATATGGTCAAGG 59 24469198 24469217 AATCACCTCTTCCACTTCAC 59 NA DesignNoJunction Mus musculus 50 Ivns1abp ENSMUSG00000023150 ENSMUST00000023918 1 1 3 81 1 153201819 153201838 CAAAGGTAATCAACTGGGTG 58 153201882 153203269 AAGGTTTGAACCTCTTCCA 58 NA Mus musculus 50 Tbc1d5 ENSMUSG00000023923 ENSMUST00000095246,ENSMUST00000097308 3 2 3 90 17 50921746 50939206 TACAGTTGAACAAAGGGCA 59 50921674 50921692 GGAGAGCCAGTGAATTCTC 59 NA Mus musculus 50 Tcfeb ENSMUSG00000023990 ENSMUST00000086932,ENSMUST00000113288,ENSMUST00000024786 1 3 3 194 17 47925086 47925195 GAGCTAACAGATGCTGAGAG 59 47926643 47926661 GATGTAATCCACAGAGGCC 59 NA Mus musculus 50 Epb4.1l3 ENSMUSG00000024044 ENSMUST00000024843,ENSMUST00000112680,ENSMUST00000080208,ENSMUST00000112679 2 4 6 113 17 69624135 69624153 CCTTAACAAACGAGTGGGA 59 69624230 69633237 AAGACTGTTTGGTCTCCTC 58 NA Mus musculus 50 Tm7sf2 ENSMUSG00000024799 ENSMUST00000113544 2 1 3 86 19 6067161 6067179 CTATTGTTCATCTGGCTCG 57 6066992 6067011 TCTTGTCCTTCAGTTCAGG 58 NA Mus musculus 50 Men1 ENSMUSG00000024947 ENSMUST00000113504,ENSMUST00000056391,ENSMUST00000113502,ENSMUST00000079327,ENSMUST00000113503,ENSMUST00000113500,ENSMUST00000078137 2 7 7 61 19 6338412 6338838 ATCCAAGACTACAACTACTGC 59 6338861 6338879 GCCACTTCAAAGAATTCCT 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Add3 ENSMUSG00000025026 ENSMUST00000111741,ENSMUST00000050096,ENSMUST00000025999 3 3 3 82 19 53306621 53306639 TAAGTAAGGAGCAAGACCA 57 53306685 53307524 GACTTTCACCAAAGTGGAG 58 NA Mus musculus 50 Anapc11 ENSMUSG00000025135 ENSMUST00000026128,ENSMUST00000093140 1 2 2 150 11 120460672 120466602 CTGTCCAGACTGTAAGGTG 59 120466716 120466734 TTTGAACTTCCACTCCTGG 59 NA Nonspecific Mus musculus 50 Gps1 ENSMUSG00000025156 ENSMUST00000116305,ENSMUST00000106143,ENSMUST00000026153 3 3 4 85 11 120649899 120649990 ATCCATGTCAAGTCTCCTC 58 120650039 120650057 CACATGTTGGTACTCATGC 58 NA Nonspecific Mus musculus 50 Sufu ENSMUSG00000025231 ENSMUST00000111867,ENSMUST00000039922 2 2 3 123 19 46475635 46475655 GGACTATGTTAGCATGTACAG 57 46475739 46499498 TCCTGTAAACTCATGGACTC 58 NA Mus musculus 50 Ube3a ENSMUSG00000025326 ENSMUST00000085231,ENSMUST00000107537 3 2 2 81 7 66543860 66543878 GTGACTAATGAATCGCCCT 59 66543923 66544086 AATCTAGATTCCGGCTTCC 58 NA Mus musculus 50 Apool ENSMUSG00000025525 ENSMUST00000026599,ENSMUST00000113414 1 2 3 103 X 109477867 109478076 GGAAGAAAGCAAGGAAGGA 59 109478143 109478161 TAATCACTGTTGCAGAGGC 59 NA Mus musculus 50 Taf3 ENSMUSG00000025782 ENSMUST00000114909,ENSMUST00000026888,ENSMUST00000114906 3 3 4 132 2 9839799 9839817 ATCAGATCTGGATCTGTCC 57 9838049 9838067 CACTGCATCTCTTCTGGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Pdgfa ENSMUSG00000025856 ENSMUST00000110897,ENSMUST00000110896,ENSMUST00000076095,ENSMUST00000046901 1 4 4 99 5 139464375 139464393 TTGGAGACAAGTCTGAGAG 58 139462323 139464313 TGGCTTCCTCAATACTTCTC 59 NA Mus musculus 50 Creb1 ENSMUSG00000025958 ENSMUST00000049932,ENSMUST00000087366 1 2 4 90 1 64616770 64616788 CAGAAGAGGAGACTTCAGC 59 64616842 64620656 GTAATGGCAATGTACTGCC 58 NA Mus musculus 50 Lgtn ENSMUSG00000026427 ENSMUST00000086578,ENSMUST00000068791,ENSMUST00000068805,ENSMUST00000112446 3 4 4 147 1 133061774 133062910 CAGACAACAGAAATCTGGTG 58 133064716 133064735 AATGTTACTTGGTAGGCAGG 59 NA Mus musculus 50 Lgtn ENSMUSG00000026427 ENSMUST00000112446 3 1 4 157 1 133067541 133067559 TATGGTCTAGATCCGTGCT 59 133067678 133068507 CACATGATTTCAAGCAGTAGC 59 NA Mus musculus 50 Rsu1 ENSMUSG00000026727 ENSMUST00000028059 3 1 2 132 2 13146047 13163384 AACAAGCTAACAACTGTGC 58 13145933 13145951 CAAGGTTCAGGTGTTTGAG 58 NA Mus musculus 50 Hnmt ENSMUSG00000026986 ENSMUST00000051416,ENSMUST00000114498,ENSMUST00000114497 3 3 3 88 2 23859466 23864539 TCTTGTGTCAGGAACTAGTG 58 23859397 23859415 ATGTGACATACTGGCAGAG 59 NA Mus musculus 50 Zfp385b ENSMUSG00000027016 ENSMUST00000099977,ENSMUST00000111829 2 2 5 152 2 77557625 77557643 CATTATGACGGCAAATCCC 58 77366697 77557510 TACAACTTGGGCTGTTACTG 59 NA Mus musculus 50 Phospho2 ENSMUSG00000027088 ENSMUST00000112266,ENSMUST00000028494 1 2 2 78 2 69630525 69630543 ATTGGACTGCAAGTACCAG 59 69633568 69633587 TCAAAGTCAAACACCAACAG 58 NA DesignNoJunction, InUTR Mus musculus 50 Usp50 ENSMUSG00000027364 ENSMUST00000028842 3 1 2 80 2 126595650 126595670 CCTCACTCCTTATATCTGTCC 58 126587411 126595609 AGATCTCCAAAGTGGTTCAC 59 NA Mus musculus 50 Lpin3 ENSMUSG00000027412 ENSMUST00000109457,ENSMUST00000040872 3 2 4 171 2 160725554 160727400 AACTTACCTGAGAGCACTG 58 160728300 160728321 TGCTTAAGACTTCTGTCTTCTC 59 NA Mus musculus 50 Raly ENSMUSG00000027593 ENSMUST00000058089,ENSMUST00000109701 2 2 4 162 2 154683190 154683208 TGTCCAGTATGCCAATGAG 59 154685477 154687585 ATCAAACAGCCTGTAGATGG 59 NA Mus musculus 50 Syt6 ENSMUSG00000027849 ENSMUST00000098785,ENSMUST00000090697 3 2 2 92 3 103391636 103391654 GGTCATCCTGGACAATCTC 59 103391709 103424719 TCCACACTTTCACTAGTAGC 59 NA Mus musculus 50 Ndst3 ENSMUSG00000027977 ENSMUST00000106420,ENSMUST00000029602 2 2 4 93 3 123309944 123330889 AAAGTTTGCCTTAGAGCAC 58 123309869 123309888 ATAAAGCTGAACATGGACAG 57 NA Mus musculus 50 Adam15 ENSMUSG00000028041 ENSMUST00000029676,ENSMUST00000107448,ENSMUST00000074582,ENSMUST00000107447,ENSMUST00000107446 2 5 5 81 3 89149909 89149930 CTTAAGCGAGATGTAGTAACAG 58 89149744 89149867 CAGGGTACTTTCTGACCTC 58 NA Mus musculus 50 Pias3 ENSMUSG00000028101 ENSMUST00000107076,ENSMUST00000064900,ENSMUST00000107077,ENSMUST00000029743 2 4 4 92 3 96505263 96505281 ATCAACATCACACCCTTGG 59 96505337 96505550 CAAGGAGTAATTCCGTCCA 58 NA Mus musculus 50 Hormad1 ENSMUSG00000028109 ENSMUST00000090797,ENSMUST00000107154,ENSMUST00000029754 2 3 3 147 3 95374866 95379466 GAGATCCTCAGACAATTTCAG 58 95380248 95380267 CGAATGAGGAGAATACTTGC 58 NA Mus musculus 50 Ccnc ENSMUSG00000028252 ENSMUST00000065928,ENSMUST00000051664,ENSMUST00000102997,ENSMUST00000108240,ENSMUST00000029916 3 5 5 85 4 21670448 21673501 CATGATCGCTTTAGCTTGC 59 21673549 21673568 TATCCACAGAAAGTTCTGCA 58 NA Mus musculus 50 Ptprd ENSMUSG00000028399 ENSMUST00000072540,ENSMUST00000098005,ENSMUST00000102834 2 3 9 82 4 75731456 75748870 CCATGCAATCAATGTTTGC 58 75731392 75731410 CTCTGGAATCTCCCAAGAC 59 NA Mus musculus 50 Aptx ENSMUSG00000028411 ENSMUST00000108104,ENSMUST00000068125,ENSMUST00000030119 2 3 4 108 4 40642166 40642425 TGTCAAAGTACAGCAGATGG 59 40642077 40642095 ATTCACCATGTGGAGAACC 59 NA Mus musculus 50 Ubap1 ENSMUSG00000028437 ENSMUST00000108060 3 1 3 126 4 41326789 41326807 TTTGAACTTGAACAGTGGC 58 41326896 41335140 ATAGTCGAGAATTGTGGGAC 59 NA Mus musculus 50 Cntfr ENSMUSG00000028444 ENSMUST00000102962,ENSMUST00000102961,ENSMUST00000084701,ENSMUST00000064443 3 4 4 178 4 41622060 41622078 TCTACACGCAGAAACACAG 59 41617957 41617975 TAAGCTTCGCAGTATCAGC 59 NA DesignNoJunction Mus musculus 50 Nfia ENSMUSG00000028565 ENSMUST00000097969,ENSMUST00000107062,ENSMUST00000075448,ENSMUST00000107061,ENSMUST00000052018,ENSMUST00000107057,ENSMUST00000107055 3 7 7 83 4 97729810 97729828 GACGCTGAAAGAGTTTGTC 59 97729875 97731982 CTTCCATTGGGATTGAGGA 58 NA Nonspecific Mus musculus 50 Cyp2j13 ENSMUSG00000028571 ENSMUST00000107078 3 1 4 100 4 95725810 95734887 CCTAATGGTCCATTACCCAG 59 95725729 95725747 ATGTTGTCTCTGTTCCAGC 59 NA Mus musculus 50 Yars ENSMUSG00000028811 ENSMUST00000106054,ENSMUST00000001365 1 2 2 81 4 128874460 128874478 CCATGCTGGAGAGTATTGG 59 128874523 128877978 GTGTACTCTTTGCTGAGCT 59 NA Mus musculus 50 Sytl1 ENSMUSG00000028860 ENSMUST00000030674,ENSMUST00000105908 3 2 2 82 4 132809571 132811464 GACACTTACATTCAATGCTCAG 59 132809510 132809528 CTGAGACTTCTTCGAACCA 58 NA Mus musculus 50 Ptpru ENSMUSG00000028909 ENSMUST00000105987,ENSMUST00000030741,ENSMUST00000105985 3 3 6 121 4 131332790 131332808 CTACATCGTCCTGGATGTG 59 131332260 131332706 TATATTGTTCCTCCGTCTGG 58 NA Mus musculus 50 Cxcl9 ENSMUSG00000029417 ENSMUST00000113093,ENSMUST00000031365 2 2 2 76 5 92755809 92755828 AAAGACCTCAAACAGTTTGC 59 92754151 92754169 TGATCTCCGTTCTTCAGTG 59 NA DesignNoJunction Mus musculus 50 Il31 ENSMUSG00000029437 ENSMUST00000031389 1 1 1 76 5 123931727 123931745 TGAAACAAGAGTCTCAGGA 57 123930710 123930728 TATTGATTCGTCTGCTGAC 57 NA DesignNoJunction Mus musculus 50 OTTMUSG00000010433 ENSMUSG00000029451 ENSMUST00000094522,ENSMUST00000105768 1 2 2 80 4 143440826 143440844 AACCTGGAGAGTTTGAAGG 59 143440888 143441428 GAGTTTGCACCTACTGGAG 59 NA Nonspecific Mus musculus 50 Ncor2 ENSMUSG00000029478 ENSMUST00000111398,ENSMUST00000111402,ENSMUST00000111401,ENSMUST00000111393,ENSMUST00000086083,ENSMUST00000055256 3 6 8 153 5 125583062 125586579 ATGAGAACCGGAAGAAAGC 59 125572058 125572077 TACAAGATCAGCTTCTTCCG 59 NA Mus musculus 50 Hsp110 ENSMUSG00000029657 ENSMUST00000110499 3 1 4 168 5 150427684 150427702 AGAGTGAAGGTCAAAGTGC 59 150423249 150427553 TTTCATTTGCATCCACATCC 59 NA Mus musculus 50 Tspan12 ENSMUSG00000029669 ENSMUST00000031678,ENSMUST00000090596 2 2 2 81 6 21785434 21785453 CTTATCATCGTGGGAATGCT 59 21756298 21785390 GTAACGTTCCGAAGTACCA 59 NA Mus musculus 50 Pcolce ENSMUSG00000029718 ENSMUST00000031731 3 1 1 63 5 138046711 138046729 TGAAGTTGTATGTGCCCTG 59 138046527 138046545 ATCAGCAGATAACTGGCTC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Tsc22d4 ENSMUSG00000029723 ENSMUST00000100540,ENSMUST00000100539,ENSMUST00000049554 1 3 4 84 5 138189076 138192442 GAGACAGGAAAGGTACCTC 58 138192490 138192508 CTGGAGACTTATGGACCAG 58 NA Mus musculus 50 Svopl ENSMUSG00000029830 ENSMUST00000096040,ENSMUST00000040486 2 2 2 83 6 37991153 37991542 AGCAGAAAGAGACCAAGAC 59 37991088 37991107 TTAGGAAGAGTGCAATGTGG 59 NA Mus musculus 50 Itpr2 ENSMUSG00000030287 ENSMUST00000079573 3 1 3 82 6 146366530 146371238 AGGGTGATAATGTGAATGC 57 146366466 146366484 ATCCTCTCGATAGGAACTG 57 NA Mus musculus 50 Sult1a1 ENSMUSG00000030711 ENSMUST00000106373,ENSMUST00000106371,ENSMUST00000106372,ENSMUST00000075935 2 4 4 81 7 133817686 133817794 GATGGGAAAGTGTCCTATGG 59 133817624 133817643 GATAGAGAACAGGGTGAGTG 59 NA Mus musculus 50 Trat1 ENSMUSG00000030775 ENSMUST00000071647 3 1 2 90 16 48761540 48761558 GACTTCTAGCCTTCTTGGG 59 48742364 48761487 TTCATCAACTCTCGTCTCTG 59 NA Mus musculus 50 Zrsr2 ENSMUSG00000031370 ENSMUST00000112289,ENSMUST00000033736 1 2 3 80 X 160381237 160387201 TTGGAGATAGGTGTTCACG 58 160381175 160381194 CAAATGTTGTAAACATGCCC 58 NA Mus musculus 50 Rnf128 ENSMUSG00000031438 ENSMUST00000113027,ENSMUST00000113029,ENSMUST00000113026,ENSMUST00000033815 3 4 4 115 X 136177038 136177058 GATTACGAAATGCAAGAGCTC 59 136193417 136198133 GCCAATTTCCTTGTCTCCT 59 NA Mus musculus 50 Prosc ENSMUSG00000031485 ENSMUST00000033875 3 1 2 172 8 28155898 28156407 ACCCTAAGATTCTGTCTTCC 58 28159716 28159734 TGTAGGACCTTTCTTCTGC 58 NA Mus musculus 50 Cog2 ENSMUSG00000031979 ENSMUST00000034460,ENSMUST00000093038 1 2 3 80 8 127074181 127074199 CGGTGGTATGAGTGATGAC 59 127074241 127075301 ATCCTTTGTATCTGTTCTCCC 59 NA Mus musculus 50 Rangrf ENSMUSG00000032892 ENSMUST00000038644 2 1 2 300 11 68787052 68787154 ATTGATGTGAGTGACCTCC 58 68786515 68786621 TGACATCCTTTGCTACCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Usp37 ENSMUSG00000033364 ENSMUST00000044260 1 1 2 96 1 74508208 74508226 CATCCCAAGATTCCTGACC 59 74506545 74508148 TGGTCTAGAAATTGCCACG 59 NA Mus musculus 50 Clasp2 ENSMUSG00000033392 ENSMUST00000035088,ENSMUST00000111849 3 2 5 80 9 113682828 113682851 GAGATTTATAGACACGTAGGAGAG 59 113682887 113695694 TACCATTTCTAATCTAGCAGGG 59 NA Mus musculus 50 Clasp2 ENSMUSG00000033392 ENSMUST00000035089 1 1 5 156 9 113789230 113789248 TAGCTCCAATTGGTCAGAG 58 113790869 113799090 GAACATGCTGAACACTCTC 58 NA Mus musculus 50 Myo6 ENSMUSG00000033577 ENSMUST00000113259,ENSMUST00000113268 2 2 6 98 9 80141353 80144461 ACTTCTAAGGAACAAATGGC 58 80146985 80147004 ATCATGTTTCTTGGTACCAG 57 NA Mus musculus 50 Pcgf3 ENSMUSG00000033623 ENSMUST00000112597,ENSMUST00000046975 3 2 2 80 5 108904156 108904175 TGGAGGAGAATAATACCTGC 58 108904215 108907332 TTCTGTCATGACCGATATACTG 59 NA Mus musculus 50 Gabrb3 ENSMUSG00000033676 ENSMUST00000085240,ENSMUST00000039697 2 2 2 107 7 65044309 65047871 ATTGAAAGCTATGGCTACAC 57 65047941 65047959 TACAATGGAGAACTGTGGG 58 NA Mus musculus 50 Tubgcp5 ENSMUSG00000033790 ENSMUST00000094359 3 1 4 86 7 63072012 63074087 CATCAACTTTGCAAGGCTG 59 63074134 63074155 TAGAAGTCATACATGGTGTCTC 59 NA Mus musculus 50 Loxl2 ENSMUSG00000034205 ENSMUST00000022660,ENSMUST00000100420 1 2 3 80 14 70090009 70090028 TACCGTCATGACATTGACTG 59 70090069 70092132 GTTAATGACAACCTGGAACAG 59 NA Mus musculus 50 Hmgb2l1 ENSMUSG00000034518 ENSMUST00000041759,ENSMUST00000109940 3 2 2 101 8 77547118 77547136 GTATCTGCAGCACAAACAG 59 77547201 77547912 ACTCCTACAGAAGAGGCTC 59 NA Mus musculus 50 C630004H02Rik ENSMUSG00000034586 ENSMUST00000044152,ENSMUST00000106542,ENSMUST00000106541 1 3 3 88 11 115217729 115217945 GATGATGCTGATCCTCCAG 59 115216729 115216748 TTGAGGATGAACTGGAAGTC 59 NA Mus musculus 50 B3galt1 ENSMUSG00000034780 ENSMUST00000042456,ENSMUST00000112346 1 2 2 60 2 67956108 67956126 CCGTTCAGTCACCTAACAG 59 67956150 67956168 GTCGAGTTCTTATGTTGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Epn1 ENSMUSG00000035203 ENSMUST00000108570,ENSMUST00000098845,ENSMUST00000045277 1 3 3 119 7 5044976 5045506 GGAGCACGATAAGGAAGAG 59 5046560 5046578 TCAGCAAGATCCATGAGAG 58 NA Mus musculus 50 Impg2 ENSMUSG00000035270 ENSMUST00000048736 1 1 3 94 16 56252375 56252393 TTATATCGCTGAGACGCTG 59 56252451 56258266 GAAGCACTGCATTGATGAG 59 NA Mus musculus 50 Ssx9 ENSMUSG00000035371 ENSMUST00000089384,ENSMUST00000103001 2 2 2 109 X 8326145 8326167 CATACTACTCTGATGAAGAGTGG 59 8326236 8326553 GTTCATGGTGACACCTAGG 59 NA Mus musculus 50 1600014K23Rik ENSMUSG00000035491 ENSMUST00000048382,ENSMUST00000113988 1 2 2 60 X 82515330 82515348 CTCTACCTGTGCAACTTCC 59 82515372 82515390 CCTTGAGGATCTCTACCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ggta1 ENSMUSG00000035778 ENSMUST00000113001,ENSMUST00000091012 3 2 8 113 2 35277744 35277763 AAGTAATCCTGTTGATGCTG 57 35268934 35271997 GATAACTGTGGGTCTTTGTG 58 NA Mus musculus 50 Dcdc2a ENSMUSG00000035910 ENSMUST00000036932 2 1 2 85 13 25211262 25212238 AATCCCAGACAATGGATGG 59 25212284 25212305 CAGTCACTCTATTTCTGTTTCC 58 NA Mus musculus 50 Elf1 ENSMUSG00000036461 ENSMUST00000040131,ENSMUST00000110835 3 2 3 122 14 79960622 79960641 TTATGCTGGTCTAGCTTGTG 59 79960726 79965278 GAAGCCTCAACTGTAAGGG 59 NA Mus musculus 50 Sbf1 ENSMUSG00000036529 ENSMUST00000081421 2 1 2 106 15 89138001 89138019 ATCTATGCTATCCACGTGG 58 89137356 89137931 GAGATGGTTCTCTGAGACC 58 NA Mus musculus 50 9030025P20Rik ENSMUSG00000036552 ENSMUST00000040594,ENSMUST00000097393,ENSMUST00000097394 3 3 5 192 17 15190334 15193715 ACAGTGTCAGAACTGAAGG 59 15195795 15196321 AATTTCCTTCCAATCTGCCT 59 NA Mus musculus 50 Mag ENSMUSG00000036634 ENSMUST00000073818 3 1 2 85 7 31684706 31685664 AGTATGAGAGTGAGAAGCAG 58 31684640 31684659 ATAACTGAGGTCCAGTTCTG 58 NA Mus musculus 50 Mbd5 ENSMUSG00000036792 ENSMUST00000112745,ENSMUST00000112754,ENSMUST00000047413,ENSMUST00000112743 1 4 4 95 2 49106857 49106875 GAAAGATCATTGCAGTGGC 59 49106934 49111705 GAGTTGCATTTGTTCCTCC 59 NA Mus musculus 50 Mrpl55 ENSMUSG00000036860 ENSMUST00000108786,ENSMUST00000108787,ENSMUST00000045697,ENSMUST00000108785,ENSMUST00000108784,ENSMUST00000116374 3 6 6 132 11 59018219 59018238 CTATCCATATCCGATACCGG 58 59019224 59019242 TCTTCTTCCCTCTTCTGCT 59 NA DesignNoJunction Mus musculus 50 Wnt8b ENSMUSG00000036961 ENSMUST00000041163 1 1 1 118 19 44584992 44585010 GAGACTTTGACAACTGTGG 58 44585774 44585792 AAACTGCTTGGAAATTGCC 59 NA DesignNoJunction Mus musculus 50 A230067G21Rik ENSMUSG00000037110 ENSMUST00000109986,ENSMUST00000048623,ENSMUST00000109982 1 3 3 80 2 146250403 146250422 GGAGTTGAAATGACAAACCT 58 146247483 146250360 TAGGATACAACCTTTGCCA 58 NA Mus musculus 50 Gpr160 ENSMUSG00000037661 ENSMUST00000108261,ENSMUST00000046748,ENSMUST00000108258 2 3 4 137 3 30776473 30788872 ACCTAGAATCTAGGTCACAC 57 30794640 30794658 AGAAACAGCTTCACTTTGG 58 NA InUTR Mus musculus 50 Armc3 ENSMUSG00000037683 ENSMUST00000114640 1 1 2 80 2 19218044 19218454 AAGGCCAATGCTATATTTGG 58 19218497 19218515 AGCTCTGCTAAGGATAGTG 58 NA Mus musculus 50 Asah3l ENSMUSG00000038007 ENSMUST00000045224 3 1 2 158 4 86546518 86557532 GAAGAGGTGTGACAATGTG 58 86557653 86563312 CAGATGAGAATATGCCACAC 58 NA DesignRelaxed Mus musculus 50 Camp ENSMUSG00000038357 ENSMUST00000112022,ENSMUST00000043185 1 2 2 166 9 109750906 109750924 TGACATCAGCTGTAACGAG 59 109749946 109749964 CTACTACTCTGGCTGAGGT 59 NA DesignNoJunction Mus musculus 50 BC057079 ENSMUSG00000038368 ENSMUST00000097992,ENSMUST00000084432,ENSMUST00000107148,ENSMUST00000107147 3 4 4 83 4 88049240 88049261 CTTAGAACTGATGGGTTATGTG 58 88049305 88053027 AAGTCCAAAGCCTCTTCAG 59 NA Mus musculus 50 Gtpbp5 ENSMUSG00000039069 ENSMUST00000108901,ENSMUST00000087563 2 2 3 154 2 179816927 179818056 TCATCCTGAGAGTTGACCA 59 179818777 179818795 TTCTTTCACCAAGGTACCC 59 NA Mus musculus 50 Whrn ENSMUSG00000039137 ENSMUST00000102867,ENSMUST00000107393,ENSMUST00000063650,ENSMUST00000107388,ENSMUST00000095037 3 5 11 85 4 63092941 63092959 TTCCATGGTTTCCTACAGC 59 63080518 63092893 CTAATGTATTCCTGGCCGAG 59 NA Mus musculus 50 Stim2 ENSMUSG00000039156 ENSMUST00000071083,ENSMUST00000087347 3 2 3 81 5 54493862 54493881 TTGAACTGCCACAATATGAG 58 54493923 54494829 GTTTCATGAACTGCTATCCTG 59 NA Mus musculus 50 Ciz1 ENSMUSG00000039205 ENSMUST00000113334,ENSMUST00000075923,ENSMUST00000113338,ENSMUST00000113336,ENSMUST00000048978,ENSMUST00000113332,ENSMUST00000048964,ENSMUST00000113331 2 8 8 80 2 32233080 32233098 AGTTCTACGACAGCAACTC 59 32233139 32233493 CTTTGTATTTCTGCAGGTTCTC 59 NA Mus musculus 50 Foxp3 ENSMUSG00000039521 ENSMUST00000115740,ENSMUST00000115739,ENSMUST00000115738,ENSMUST00000045566 3 4 4 133 X 7168645 7169295 CTTCCCAGAGTTCTTCCAC 59 7169803 7169824 GGTAGATTTCATTGAGTGTCCT 59 NA Mus musculus 50 Pik3cd ENSMUSG00000039936 ENSMUST00000038859,ENSMUST00000105688,ENSMUST00000105689 3 3 4 133 4 149029543 149029561 GAACATGAGAAGGACCTGG 59 149029341 149029447 CACAGCAAATAGAGCATCTG 58 NA Mus musculus 50 Adam22 ENSMUSG00000040537 ENSMUST00000050166,ENSMUST00000088761,ENSMUST00000102987,ENSMUST00000088744 2 4 13 154 5 8082264 8092352 CTAACTCAACTGAGACCCT 57 8078689 8082146 AATGGATGTCTCCCATAGC 58 NA Mus musculus 50 Hisppd1 ENSMUSG00000040648 ENSMUST00000042509 3 1 2 91 1 99620307 99620328 GTTTAAACCATTGGTGTCTGAG 59 99616474 99620255 CAGACACAACCTCATTTGC 59 NA Mus musculus 50 Reps2 ENSMUSG00000040855 ENSMUST00000101102 1 1 3 82 X 158990592 158992737 GATAAGCAGCAGGAAACAC 58 158990528 158990546 GACACCCTCTGGTAATGAG 59 NA Mus musculus 50 Rps19 ENSMUSG00000040952 ENSMUST00000048156,ENSMUST00000108430,ENSMUST00000108429 2 3 3 69 7 25673356 25673374 CAAGATCTATGGAGGACGG 58 25673407 25673425 CACACTCTTAGAGCCTCTG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Sytl3 ENSMUSG00000041831 ENSMUST00000097430,ENSMUST00000075075,ENSMUST00000115762,ENSMUST00000115763 1 4 7 60 17 6878257 6878275 GAGTCCTTCAAGGAGTTGG 59 6878296 6878317 CAGTTTGATCACGATATAGGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 BC057022 ENSMUSG00000041930 ENSMUST00000043650 1 1 1 252 5 115018339 115018357 CCAGCAATCTTTATCACCC 58 115060848 115060866 GAGGAATGCATAGAGCTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Eif2c4 ENSMUSG00000042500 ENSMUST00000084285 1 1 3 80 4 126190854 126194094 CAAAGAAATTAGGGTACTCACG 59 126190795 126190816 TACTTTCCGTGAGTACTTTCAG 59 NA Mus musculus 50 Dmtf1 ENSMUSG00000042508 ENSMUST00000071921 2 1 5 137 5 9126746 9127972 GATGTTTCATTTCCTGTCCT 57 9126628 9126646 CTGAACATGCTGTACACTG 58 NA Mus musculus 50 Gpx2 ENSMUSG00000042808 ENSMUST00000082431 2 1 1 63 12 77896255 77896273 TGTGCTGATTGAGAATGTG 58 77896210 77896228 ATTGAGCTGGTTGTAGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tlr7 ENSMUSG00000044583 ENSMUST00000112161,ENSMUST00000060719,ENSMUST00000112164 1 3 4 73 X 163767956 163767974 CACCAGACCTCTTGATTCC 59 163746386 163746404 ATTTGTCTCTTCCGTGTCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Hnrph2 ENSMUSG00000045427 ENSMUST00000050331,ENSMUST00000059297 1 2 5 112 X 131137290 131137465 CAGGGTCAAAGGATAATTCCT 59 131139431 131139449 CATGGTGACTGATGGACTC 59 NA InUTR Mus musculus 50 Npas4 ENSMUSG00000045903 ENSMUST00000113754,ENSMUST00000056129 2 2 2 82 19 4987367 4987386 GACATGGATTTACTGCATGC 59 4987174 4987322 CTTCCGTGTCACTGATAGG 59 NA Mus musculus 50 B3gat1 ENSMUSG00000045994 ENSMUST00000115269,ENSMUST00000067362,ENSMUST00000067400 1 3 3 85 9 26564543 26564561 CTACCAGGAAAGCAGTCTC 59 26564609 26565287 AGACCAAGATCTTGGTACAG 58 NA Mus musculus 50 Ppp1r15b ENSMUSG00000046062 ENSMUST00000052529 2 1 1 60 1 135028486 135028504 AGGTACTGGACCAAATTGC 59 135028528 135028546 GCTTCTGGAATAGGCTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 C77370 ENSMUSG00000046449 ENSMUST00000087879 1 1 2 90 X 101279252 101279270 AATATAAGGGAAAGCGCGT 59 101278608 101279199 TTGTAGTTGGAATCCCTCAG 59 NA Mus musculus 50 Lrrc8e ENSMUSG00000046589 ENSMUST00000053035 1 1 1 84 8 4231739 4231757 GATGTTCTGGCTGAGTACC 59 4233915 4233933 TGATCTTGTCCTGTGTCAC 59 NA DesignNoJunction Mus musculus 50 Smgc ENSMUSG00000047295 ENSMUST00000072327 2 1 6 94 15 91675886 91675906 CAAGTGAACATCTGAGTAACC 58 91675962 91690714 TTCATTGGAGTCACCTGAG 58 NA Mus musculus 50 Kcne4 ENSMUSG00000047330 ENSMUST00000057262 3 1 2 60 1 78814380 78814398 TACATGAAATCCAAGAGGC 57 78814422 78814440 CCTCGTCTTTGTACAACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Dnahc14 ENSMUSG00000047369 ENSMUST00000097446,ENSMUST00000060610 2 2 2 81 1 183674903 183674921 AACTGTACTGGTCACAGAC 58 183674966 183676004 GATCTCCTTCTCCTTTGCT 58 NA Mus musculus 50 Zc3hav1l ENSMUSG00000047749 ENSMUST00000058524 1 1 1 114 6 38248033 38248051 TATCAACGTCCAAGTCCTG 58 38245305 38247956 GTACATCTGACAGACCTCTG 59 NA Mus musculus 50 Fbxw10 ENSMUSG00000047821 ENSMUST00000036085 1 1 4 80 11 62667794 62668798 CTTACACAGGGTCCTACAC 58 62668840 62668860 CATCTACTATCTTGGGCACTG 59 NA Mus musculus 50 Pygo2 ENSMUSG00000047824 ENSMUST00000060061,ENSMUST00000107414,ENSMUST00000107413 3 3 3 109 3 89236692 89236711 CAACATGAACTTTCCCAGTC 59 89236783 89236801 AGATCATGGGACCAAATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bex4 ENSMUSG00000047844 ENSMUST00000116527,ENSMUST00000059397 1 2 2 71 X 132674110 132674128 GAAAGAGGAGAAGGCAAGG 59 132674420 132674439 ACAGTGAGATCCAGTATGAC 58 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 D930001I22Rik ENSMUSG00000048486 ENSMUST00000109418,ENSMUST00000088333 3 2 2 60 2 163295306 163295326 TGGGTATTGGTATCTGAAGTC 58 163295266 163295285 AGTCAAACTACAACTCTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Frmpd4 ENSMUSG00000049176 ENSMUST00000112147,ENSMUST00000112149,ENSMUST00000112146 1 3 3 80 X 163953837 163960036 ATTCAGCCCTATCCATCTC 58 163953775 163953793 CACTTTGACTGGATTGGAC 58 NA Nonspecific Mus musculus 50 Zfp668 ENSMUSG00000049728 ENSMUST00000106263,ENSMUST00000106262,ENSMUST00000106261,ENSMUST00000054415 1 4 4 188 7 135011282 135011300 CTGAGCTCAAGGACTTACG 59 135010720 135010738 TTTGGTAAGAGCTGAGCTG 59 NA DesignNoJunction Mus musculus 50 Tmsb4x ENSMUSG00000049775 ENSMUST00000056887,ENSMUST00000112172,ENSMUST00000112176,ENSMUST00000112175 2 4 4 138 X 163645921 163645940 TCGAGAAATTCGATAAGTCG 57 163645401 163645419 ATGTACAGTGCATATTGGC 57 NA DesignNoJunction, InUTR Mus musculus 50 Lrrc19 ENSMUSG00000049799 ENSMUST00000107101,ENSMUST00000053419 2 2 2 80 4 94307654 94310003 AAGCTTCTGAAACAGAAGTC 58 94307593 94307614 TAACATTGGTACTGATACCCTC 59 NA Mus musculus 50 Fhad1 ENSMUSG00000051435 ENSMUST00000105780,ENSMUST00000036701,ENSMUST00000105779 3 3 4 82 4 141484338 141484358 CACTCTAGAGAAGGAGAAGAG 58 141478314 141484297 GCTCCTTTAATTCTATCTCCTC 57 NA Mus musculus 50 Fhad1 ENSMUSG00000051435 ENSMUST00000105780 2 1 4 81 4 141511252 141511270 GTCATCAAAGCCACTTTCG 59 141510088 141511210 GGATGATCTTCTCTATCAGCTG 59 NA Mus musculus 50 Rps19bp1 ENSMUSG00000051518 ENSMUST00000052499 1 1 1 119 15 80091763 80091781 CCTGAAGTTTATGACCAGC 58 80091496 80091514 TTCTTGTTCTTCGTCTTGG 57 NA DesignNoJunction Mus musculus 50 Sec31b ENSMUSG00000051984 ENSMUST00000063632,ENSMUST00000111985 2 2 2 81 19 44601541 44601559 ACCTTAGAGCAGGATTCCA 59 44601184 44601496 AAGTGTCCACCTTCTTCTG 59 NA Mus musculus 50 Btla ENSMUSG00000052013 ENSMUST00000063654,ENSMUST00000102802 2 2 3 90 16 45239399 45239418 GATAATGGGTCGTATAGCTG 57 45239471 45242830 TTTGAGTCCTTTCTGTCAC 57 NA Mus musculus 50 Immt ENSMUSG00000052337 ENSMUST00000114156 2 1 4 95 6 71824835 71824855 ATGACCCTAGAAACTAAGCAG 59 71824912 71827252 TATCCAGAACTCTTGCTGC 59 NA Mus musculus 50 9430076C15Rik ENSMUSG00000053007 ENSMUST00000047450 2 1 3 60 6 53642950 53642971 CATAAAGACTGTCCGATAACAG 58 53642991 53643926 TCTCTGGACTTAAATACCCT 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Kcnip1 ENSMUSG00000053519 ENSMUST00000101368,ENSMUST00000109340,ENSMUST00000065970,ENSMUST00000109341,ENSMUST00000093194 1 5 5 92 11 33534579 33534597 TGTGGATGTCTTCTTCCAG 58 33530588 33533155 ATGTTGTCATCCTCCTGAC 58 NA Mus musculus 50 Zfand2a ENSMUSG00000053581 ENSMUST00000110851,ENSMUST00000079996 2 2 2 87 5 139950863 139950881 CAACTTCTGCATTCAGCAC 59 139949737 139950812 GGATGTAGAAGTCCTCCCT 59 NA Mus musculus 50 Mat2a ENSMUSG00000053907 ENSMUST00000059472,ENSMUST00000066627 2 2 2 113 6 72387074 72387093 GAATGATTCTTCTTGCTGGG 58 72386515 72386999 AGTCAAACCCTTTGGAAGAG 59 NA Mus musculus 50 Cd8a ENSMUSG00000053977 ENSMUST00000066747 2 1 1 67 6 71324569 71324587 AGAGACCAGAAGATTGTCG 58 71324769 71324787 AATATCACAGGCGAAGTCC 59 NA DesignNoJunction Mus musculus 50 4831426I19Rik ENSMUSG00000054150 ENSMUST00000067005,ENSMUST00000095439,ENSMUST00000109927 3 3 3 82 12 106197662 106197680 AAGAAACTTGTCACCTTCC 57 106196330 106197618 CCCTTCATACTTTGGTATTCC 58 NA Mus musculus 50 Tprkb ENSMUSG00000054226 ENSMUST00000113753,ENSMUST00000113752,ENSMUST00000067137,ENSMUST00000089570 1 4 4 153 6 85874509 85877245 CCAATGTGATTGTCGATCC 58 85877806 85877824 AATTTCTTCAAGGCCTCTG 57 NA Mus musculus 50 MGI:98976 ENSMUSG00000054626 ENSMUST00000067782,ENSMUST00000114814,ENSMUST00000114810,ENSMUST00000067763 1 4 4 133 X 51098672 51098960 GGAGATACACGATCTCCAG 58 51091090 51091109 TCTAATTTCACGTTGCTGTC 58 NA Mus musculus 50 Mtnr1a ENSMUSG00000054764 ENSMUST00000095329 2 1 2 79 8 46170976 46170995 GAACCCTTTATATCCGTCTG 57 46172592 46172610 GATAAGGGTAAACAGCCAC 57 NA DesignNoJunction Mus musculus 50 Atrnl1 ENSMUSG00000054843 ENSMUST00000077282 1 1 2 90 19 57814712 57826130 GACATGCTATTACAGTCTTCTG 58 57826181 57826199 GATGAAGTTGATGGCAGTG 58 NA Nonspecific Mus musculus 50 C030011O14Rik ENSMUSG00000054942 ENSMUST00000068243 2 1 2 83 3 151960136 151960154 AGACTATGGATGAGCTTGG 58 151952097 151960089 CAAGGATTAGCTCTGTTGC 58 NA Mus musculus 50 Fbxo6 ENSMUSG00000055401 ENSMUST00000105706,ENSMUST00000056965,ENSMUST00000030858 3 3 3 95 4 147520287 147520441 AAATGGCAAGAGATTTCCCA 59 147520211 147520229 TTTCCAGAACTGAGTGTCC 59 NA Mus musculus 50 Fmnl1 ENSMUSG00000055805 ENSMUST00000021322,ENSMUST00000042286,ENSMUST00000107027 1 3 3 80 11 103056076 103056094 AGAATTTGGCTATCACCCT 58 103056138 103056586 TCTGTAGGTCATACGTCTC 57 NA Mus musculus 50 Centa1 ENSMUSG00000056413 ENSMUST00000110865,ENSMUST00000070498,ENSMUST00000075389 2 3 3 113 5 139756765 139769101 CATACTCTACAGGCTACCG 58 139756670 139756688 TGAAGTATTTCAGGGCACC 59 NA Mus musculus 50 Higd1c ENSMUSG00000056487 ENSMUST00000075675,ENSMUST00000108953 3 2 3 114 15 100205341 100205362 CGGTCTTTACAAGCTAAATTCC 59 100205435 100214168 GTAGAGAACACCTAGAGTCAC 58 NA Mus musculus 50 Dnahc9 ENSMUSG00000056752 ENSMUST00000080665,ENSMUST00000075581 1 2 4 80 11 65695182 65695200 TGTACCAGTATACCACACG 58 65693776 65695138 CGAGGAGAATCTGAAAGGT 58 NA Mus musculus 50 Commd7 ENSMUSG00000056941 ENSMUST00000109782 2 1 3 167 2 153454974 153457933 CACTTAGGAGCAGTTCTCC 59 153448564 153454218 CCATTTGGAACCAGTAGGA 58 NA InUTR Mus musculus 50 Ceacam13 ENSMUSG00000057195 ENSMUST00000108488,ENSMUST00000108489 3 2 3 82 7 18598740 18604434 TGACCTCCAAGTAAATACACC 59 18604478 18604496 TTTGATTCTTCAAGGGCCA 59 NA Nonspecific, InUTR Mus musculus 50 Arhgap24 ENSMUSG00000057315 ENSMUST00000094559,ENSMUST00000112855,ENSMUST00000112854,ENSMUST00000073302 1 4 8 86 5 103093177 103270314 GAAGTAGTTCCAGGAGGTG 58 103270364 103270382 TTCCATGTCATTCTGGGTG 59 NA Mus musculus 50 Zfp75 ENSMUSG00000057551 ENSMUST00000079042 2 1 2 89 9 19446473 19446491 TCTTGTCAGCAGAGTTTGG 59 19446543 19447056 AAATGTCACAGACTCCTGAG 59 NA Mus musculus 50 Dhcr7 ENSMUSG00000058454 ENSMUST00000073878,ENSMUST00000105904,ENSMUST00000105903,ENSMUST00000105905 3 4 4 89 7 151027267 151029027 CCGAAGACTGCAAATTCAC 59 151029080 151029098 TGAAGTCAAACCACTTCCC 59 NA Mus musculus 50 Fbxo18 ENSMUSG00000058594 ENSMUST00000114813,ENSMUST00000102966,ENSMUST00000071564 2 3 4 99 2 11678109 11678127 ATTTGAAACTCTGGCAGCT 59 11677389 11678048 ACTATGTTCATGATAGCTGGG 59 NA Mus musculus 50 Olfr224 ENSMUSG00000059279 ENSMUST00000108822,ENSMUST00000108823 1 2 2 76 11 58381551 58381569 AACTTGGAGAAGCAGAGAC 59 58380824 58380843 ACTGTCCAGTATAGTTGCTC 58 NA DesignNoJunction, InUTR Mus musculus 50 Casc4 ENSMUSG00000060227 ENSMUST00000078752,ENSMUST00000110586 2 2 4 80 2 121736571 121736591 AAAGTCATCAGACAATCTCCC 59 121736631 121737624 TCTGGTTTAGATGTGAACCTG 59 NA Mus musculus 50 Zfp128 ENSMUSG00000060397 ENSMUST00000081891 3 1 1 66 7 13470073 13470091 TATCGTGATGTGATGCTGG 59 13470374 13470392 CAGGTTTGGGAAGATCAGG 59 NA DesignNoJunction Mus musculus 50 Gm839 ENSMUSG00000060416 ENSMUST00000079186 1 1 1 84 6 89164780 89164798 CTGATAGGGTCCAACTCAG 58 89162587 89162605 ATCATGACAGTGCTTAGGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Ksr2 ENSMUSG00000061578 ENSMUST00000111949 1 1 2 102 5 118152715 118152733 AGCAACAGTTCATCTTCCC 59 118153264 118156695 CCTTCCAAGATTGTATTTGAGG 59 NA Mus musculus 50 Arf2 ENSMUSG00000062421 ENSMUST00000057921,ENSMUST00000063347 3 2 3 93 11 103834364 103843012 CCAGAACACTCAAGGTCTG 59 103843069 103843087 TTCTGCTAGCATTCTGGTC 59 NA Mus musculus 50 Phactr2 ENSMUSG00000062866 ENSMUST00000105547,ENSMUST00000105543,ENSMUST00000079698 3 3 7 86 10 12981626 12981644 AAACCTGAAGAAGGGAGTG 59 12975126 12981576 AGTGGTTGTAGTCACTGTC 58 NA Mus musculus 50 Arhgap22 ENSMUSG00000063506 ENSMUST00000111956,ENSMUST00000052768 1 2 4 86 14 34176526 34177587 ACATCTGCAAGTTTCTGGA 59 34177637 34177655 TAGGACCAAAGACAGTTGC 59 NA Mus musculus 50 Crem ENSMUSG00000063889 ENSMUST00000073545 3 1 6 93 18 3295103 3295121 AATCAGAGGAAGAAGGGAC 58 3276718 3295046 GTCTCCTCATTGTATTGCC 57 NA Mus musculus 50 Blcap ENSMUSG00000067787 ENSMUST00000088494,ENSMUST00000109528 1 2 2 284 2 157383704 157383722 CATCTGCTATAGCTGCTGG 59 157383438 157383456 ACTCTACAACAGAAGCACC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Gm608 ENSMUSG00000068284 ENSMUST00000096063,ENSMUST00000089542 3 2 2 60 16 44221215 44221235 GTCTTTGATCCAAGTCTTCCT 59 44221257 44221275 GTCCAAGAATCATACTGCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Sort1 ENSMUSG00000068747 ENSMUST00000102632 3 1 2 96 3 108157151 108159159 ACAAAGCAGAATTCCAAGTC 58 108159218 108159236 TCTTCACAATGAGGACTCC 58 NA Mus musculus 50 EG432838 ENSMUSG00000072624 ENSMUST00000100719 1 1 1 60 14 34857093 34857111 CTGTACCTGCTATGATGTG 57 34858969 34858987 GTCAAGGTTGATATACGGC 57 NA DesignNoJunction Mus musculus 50 Gal3st4 ENSMUSG00000075593 ENSMUST00000110922,ENSMUST00000100530,ENSMUST00000110921 3 3 3 94 5 138707524 138712004 CTCAAAGAGGTACTTCAGGT 58 138707449 138707467 TAATAGGAGAAGGCAGAGC 58 NA Mus musculus 50 IGKV9-124 ENSMUSG00000076511 ENSMUST00000103312 3 1 1 65 6 67892262 67892281 CAAGTCAGGAAATTAGTGGT 57 67892216 67892236 GGCGTTTAATAGTTCCATCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-78 ENSMUSG00000076542 ENSMUST00000103343 3 1 1 60 6 69009930 69009948 ATCATGTCTGCATCTCCTG 59 69009888 69009907 TTACACTTGATCTGGCACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Eif5a ENSMUSG00000078812 ENSMUST00000071026,ENSMUST00000070996,ENSMUST00000043419,ENSMUST00000108612,ENSMUST00000108611,ENSMUST00000108610,ENSMUST00000108613,ENSMUST00000108609,ENSMUST00000108608,ENSMUST00000108607 1 10 10 161 11 69731420 69731438 TCAAACGGAATGACTTCCA 59 69730994 69731107 GCACTGTGATCAGGATCTC 59 NA Mus musculus 50 A2BE20_MOUSE ENSMUSG00000078879 ENSMUST00000108986 2 1 3 60 2 176466568 176466587 AGAGAAAGTCTATGAAGGCA 58 176466610 176466628 ATGGAGATCAATGCTTGCT 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 0610010B08Rik ENSMUSG00000078881 ENSMUST00000108994,ENSMUST00000108993 1 2 3 95 2 176277486 176277507 GACCTATAAGAATCTCACAGCT 59 176277768 176278943 CTTTCATGCCTTCCATGAC 58 NA Nonspecific Mus musculus 50 3100002L24Rik ENSMUSG00000078903 ENSMUST00000099028 2 1 10 60 2 175023075 175023096 GGAAGAACATACGATTGAAGAC 59 175016663 175023055 ACTTTGGAGTCTTCCATGAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Capn3 ENSMUSG00000079110 ENSMUST00000110721,ENSMUST00000028749,ENSMUST00000110716,ENSMUST00000028748 3 4 7 98 2 120328173 120328275 GAACAAACACAAGGACCTG 58 120328719 120328737 AGATTCAGTCTTCCAGAGC 58 NA Mus musculus 50 TRDD2 ENSMUSG00000076869 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Icam2 ENSMUSG00000001029 ENSMUST00000106813,ENSMUST00000001055,ENSMUST00000106810 1 3 4 96 11 106239303 106239972 CTTGAAGTCTATGAGCCGA 58 106239225 106239243 ATAGCAGGACAGATGTCAC 58 NA Mus musculus 50 Npepps ENSMUSG00000001441 ENSMUST00000001480,ENSMUST00000107608 2 2 2 119 11 97068567 97073597 TAAGGCTTTCTTCGAGAGTC 59 97068467 97068485 TACTGGTGAATGCTGTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Coasy ENSMUSG00000001755 ENSMUST00000001806,ENSMUST00000107308 3 2 2 97 11 100946500 100946604 CCTTTGGAACAGATATTCTCC 58 100946852 100946870 TGTGAGGATCTTCATCTGC 59 NA Mus musculus 50 Folr1 ENSMUSG00000001827 ENSMUST00000106983,ENSMUST00000001882,ENSMUST00000106985,ENSMUST00000106982,ENSMUST00000106981,ENSMUST00000106986 1 6 6 231 7 109007907 109007925 CTGCCTCTATGAGTGTTCC 59 109007209 109007227 GTAGAAGGTGAAGGGATGG 59 NA DesignNoJunction Mus musculus 50 Dbf4 ENSMUSG00000002297 ENSMUST00000002368 2 1 1 80 5 8412167 8412186 TATACTGCAGAAACCACCTC 59 8410046 8412124 TCGGCTCAAACATACTCTG 59 NA Mus musculus 50 Prpf6 ENSMUSG00000002455 ENSMUST00000002529 2 1 1 80 2 181387182 181387200 GAGAAAGACCAAGAGTGTG 57 181387244 181389549 CAGAACAACTTAGCCACAG 58 NA Mus musculus 50 Pon1 ENSMUSG00000002588 ENSMUST00000002663 2 1 1 81 6 5127263 5127282 GTCCAGATAAAGTCCAGGTG 59 5125815 5127221 TAGACATACTTGCCATCAAGG 59 NA Mus musculus 50 Ap2a2 ENSMUSG00000002957 ENSMUST00000003038 2 1 1 81 7 148813810 148813829 TATGGTAACAAGACCTCCAC 58 148813870 148815097 GGTTCAGATTAGTTTGAAGGTC 58 NA Mus musculus 50 Grk5 ENSMUSG00000003228 ENSMUST00000003313 1 1 1 80 19 61152699 61152717 AGAAGACTTACACCGTGAG 58 61155267 61156766 CTTATGTGGCCATAATCATCC 58 NA Mus musculus 50 Plag1 ENSMUSG00000003282 ENSMUST00000003369 3 1 1 92 4 3832085 3832602 ATTACAAAGGCACATGGCT 59 3832011 3832030 TTCTTCAGATGGTCTTTCCG 59 NA Mus musculus 50 Calcoco2 ENSMUSG00000006056 ENSMUST00000097162 1 1 2 139 11 95961665 95961684 GACCTTAGAACACAAAGTGG 58 95961251 95961563 AATAGGCCTTCACTTCCTC 58 NA Mus musculus 50 Tspan31 ENSMUSG00000006736 ENSMUST00000060991 3 1 1 81 10 126506011 126506029 GGTTTGGTCTTCATCTTCC 58 126505652 126505966 CATTGATGACATCTGCCTG 58 NA Mus musculus 50 Sertad1 ENSMUSG00000008384 ENSMUST00000008528 3 1 1 104 7 28274828 28274846 AACTTTGGTTACCAGCCTC 59 28274914 28274932 CCATGAGGTAGTCCAACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rdm1 ENSMUSG00000010362 ENSMUST00000010506 3 1 1 150 11 101495202 101496107 ATCGTGGTTCTGGAAAGTG 59 101497095 101497113 AGAGACATTCTTCCTCCCT 59 NA Mus musculus 50 Mrpl52 ENSMUSG00000010406 ENSMUST00000010550 2 1 1 61 14 55047439 55047457 CAATGAAAGGCCAACTTCG 59 55047482 55048433 CAGTACAACTCGTCTTGCA 59 NA DesignRelaxed Mus musculus 50 Kdelr3 ENSMUSG00000010830 ENSMUST00000010974 3 1 1 81 15 79356280 79356298 ATCTCAGTAGTGTCTGGAG 57 79356342 79357513 TTCCTTTAAGGACTTTGGTC 57 NA Mus musculus 50 Ndufs2 ENSMUSG00000013593 ENSMUST00000013737 1 1 1 80 1 173168688 173168709 GCTTCTGGATGACATTTATGAG 59 173168487 173168648 CTATTGTTGGTCAGCATCTC 58 NA Mus musculus 50 Ankrd52 ENSMUSG00000014498 ENSMUST00000014642 1 1 1 80 10 127820167 127820185 CTGGGTTTGACATCAACAC 58 127820229 127820424 GACACTCAACATTTCCTCC 58 NA Mus musculus 50 C4a ENSMUSG00000015451 ENSMUST00000015595 2 1 1 82 17 34952508 34953013 CAAATTGAGAAGGAAGGAGC 58 34952360 34952378 TCCAACATCTGACCTAGGT 59 NA Mus musculus 50 Steap1 ENSMUSG00000015652 ENSMUST00000015796 3 1 1 81 5 5742879 5742897 GACGATGTTACAAACCCAG 58 5740853 5742835 AGTCCTTAGTCGAGTAACTG 58 NA Mus musculus 50 Pdzd11 ENSMUSG00000015668 ENSMUST00000015812,ENSMUST00000059099 3 2 2 84 X 97819291 97819881 CATCTCCAAGGTGATTCCA 58 97819225 97819243 ATCCACATCATTCACAGCT 58 NA Mus musculus 50 Ctsz ENSMUSG00000016256 ENSMUST00000016400 2 1 1 123 2 174263754 174263772 CTGGAGAAATGTGAACGGT 59 174259152 174263668 CTTGATGTTGATTCGGTCTG 58 NA Mus musculus 50 Tmprss6 ENSMUSG00000016942 ENSMUST00000017086 1 1 1 105 15 78284702 78285352 TATCACCTCGGTCTATGGG 59 78284615 78284633 ATAGTAGCTATGCATGCCC 58 NA Mus musculus 50 Arl5b ENSMUSG00000017418 ENSMUST00000017562,ENSMUST00000069870 2 2 2 84 2 14994760 14994780 CTTGTTGTGGATAGCATTGAC 59 14994826 14996598 TCCTTAAATCCTCATGGGC 59 NA Mus musculus 50 Rab3d ENSMUSG00000019066 ENSMUST00000115351 1 1 1 84 9 21719338 21719356 CTCATGTATGACATCGCCA 59 21719179 21719197 CATTGTCCCAGGAATAGGT 58 NA DesignNoJunction Mus musculus 50 Atp6ap1 ENSMUSG00000019087 ENSMUST00000019231,ENSMUST00000114171,ENSMUST00000114168 2 3 3 80 X 71543019 71543039 GCTTTCTACCTACTTAGACCC 59 71543081 71545599 TCAATGCTTAGCTTGTCCT 58 NA Mus musculus 50 Ffar3 ENSMUSG00000019429 ENSMUST00000094583 1 1 1 60 7 31640499 31640517 TGTAGTCTGTTGGTTCCTG 58 31640457 31640478 CCAGTATTCAGTGATGTAAACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hint3 ENSMUSG00000019791 ENSMUST00000019925 1 1 1 80 10 30331516 30334529 CATAGAAATGGTCGAGAGC 57 30331454 30331474 CTTACATCTGTGAAGTCAGTG 58 NA Mus musculus 50 Rev3l ENSMUSG00000019841 ENSMUST00000019986 3 1 1 80 10 39514823 39519698 AAGGAAAGGTAATGCATCAC 58 39519740 39519759 CTAAATAAAGTGCCAGCAGG 58 NA Mus musculus 50 4930463O16Rik ENSMUSG00000020033 ENSMUST00000020222 1 1 1 84 10 83956600 83956618 CTTACAGAGGGAGATGCTC 58 83956665 83959524 GCTTTAGAGCTCTCAATGAG 58 NA InUTR Mus musculus 50 Chac2 ENSMUSG00000020309 ENSMUST00000020553,ENSMUST00000101394 1 2 2 60 11 30877534 30877552 ACCTCTGGAAGATATTGCT 57 30877492 30877511 TGTATTTCTTCCACTTGGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Hcn2 ENSMUSG00000020331 ENSMUST00000099513,ENSMUST00000020581 2 2 2 83 10 79191844 79193598 ATACCAGGAGAAGTACAAGC 58 79193644 79193662 TAATCGTGGATCTTCTGGC 59 NA Mus musculus 50 Itgb3 ENSMUSG00000020689 ENSMUST00000021028 3 1 1 82 11 104521441 104523651 AAAGAGCTGACGGATACTG 59 104523696 104523715 TAGTACTGGAATCTGACGAC 58 NA Mus musculus 50 Ern1 ENSMUSG00000020715 ENSMUST00000106799 2 1 4 65 11 106320252 106320270 CATGCTGTTAGCAAGAGGA 59 106320205 106320223 AGAACGATCCGAATTACCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Srp54a ENSMUSG00000021020 ENSMUST00000101418 3 1 1 80 12 56206696 56209493 CAGTATGAACGATCAAGAACTG 59 56209534 56209552 GCAACTCTTTGGATTCTCC 58 NA Nonspecific Mus musculus 50 Ahsa1 ENSMUSG00000021037 ENSMUST00000021425 2 1 1 80 12 88609232 88609250 ATCAACAACAGGAAAGGCA 59 88609293 88610841 TCCTGACTTAGAGGTACCTG 59 NA Mus musculus 50 Golga5 ENSMUSG00000021192 ENSMUST00000021609 3 1 1 81 12 103731997 103732016 ATGACACCGAAACTAATCTG 57 103732059 103733918 AGGCGAATACTAAATTGGTC 57 NA Mus musculus 50 Akr1c6 ENSMUSG00000021210 ENSMUST00000021630 3 1 1 82 13 4453721 4453739 TCAGTTGACTTCAGAGGAC 58 4453784 4456405 GGTCCTTAAAGCTAGAACCA 59 NA Mus musculus 50 Tubal3 ENSMUSG00000021216 ENSMUST00000021639 1 1 1 80 13 3927510 3927528 TTCATGAGACAAGAGCTGG 59 3927570 3929794 CACGGATCCCATCTATAACAG 59 NA Mus musculus 50 Slc25a29 ENSMUSG00000021265 ENSMUST00000021693 3 1 1 148 12 110065963 110069420 TTGACATAGTCAAGGTGCG 59 110065648 110065667 GAAGGTGAGTCCCATTAGTG 59 NA Mus musculus 50 Tnfaip2 ENSMUSG00000021281 ENSMUST00000102745 1 1 2 149 12 112686292 112686459 TCTTGTCCAATGAGGTGAC 59 112686569 112686759 GTGAAATGATCTGGAGAATGTC 59 NA Mus musculus 50 Auh ENSMUSG00000021460 ENSMUST00000110031 2 1 2 60 13 53014409 53014428 AGATAAGAAAGTTCGGACCA 58 53008429 53014387 AACAGCACAGAATATCCCAG 59 NA DesignNoJunction Mus musculus 50 Trip13 ENSMUSG00000021569 ENSMUST00000022053 2 1 1 80 13 74070356 74070374 CCAGCAGTGAGAATTTGGA 59 74067652 74070312 CATGAAATTCAGCTGCAGG 59 NA Mus musculus 50 6330409N04Rik ENSMUSG00000021930 ENSMUST00000100496,ENSMUST00000022497 3 2 2 179 14 62164679 62168594 AATCCAGTCTACTGGAATCTG 58 62164520 62164538 ACTACATCTCCCTCCTGAG 59 NA Mus musculus 50 Cdadc1 ENSMUSG00000021982 ENSMUST00000056997,ENSMUST00000022555 3 2 2 81 14 60205434 60208633 TAGTGAATGCTGGAGTTAACC 59 60205373 60205393 TCAGAACTAGAAGCTTCAGTG 59 NA Mus musculus 50 Wnt5a ENSMUSG00000021994 ENSMUST00000112274,ENSMUST00000063465,ENSMUST00000112272 2 3 3 81 14 29331698 29331716 CGCTAAGGGTTCCTATGAG 59 29331759 29335682 CAGGTTGTATACTGTCCTACG 59 NA Mus musculus 50 Col14a1 ENSMUSG00000022371 ENSMUST00000023053 2 1 3 161 15 55241782 55243134 GTGACTTCAGTTCTCCAGAC 59 55243258 55243276 CGTTCCTACCACTTCTTCC 59 NA Mus musculus 50 Wbp2nl ENSMUSG00000022455 ENSMUST00000023089 3 1 1 178 15 82136804 82136823 AATAGTCTTCCGGAAAGGAG 58 82139048 82144213 CATAGGCAACTTGGTATGC 58 NA Mus musculus 50 Rpap3 ENSMUSG00000022466 ENSMUST00000023104 3 1 1 86 15 97529458 97531506 TTGATGTGGACAGGATTCTC 59 97529391 97529410 CATCTTCATCCGACTCTGAC 59 NA Mus musculus 50 Osbpl11 ENSMUSG00000022807 ENSMUST00000115064,ENSMUST00000039733 3 2 2 82 16 33227371 33227390 TGTAAATGCACATGTCTGGA 59 33227435 33229059 GACAAAGGACACCTTCTCC 59 NA Mus musculus 50 Snx4 ENSMUSG00000022808 ENSMUST00000023502 2 1 1 93 16 33268246 33269752 TAACCCAGGAAGGTAACTG 58 33277047 33277065 CTGAATGTTGCATTAAGCG 57 NA Mus musculus 50 Pros1 ENSMUSG00000022912 ENSMUST00000023629 3 1 1 82 16 62900442 62900460 CTCCTGGAAGTTACCACTG 59 62900505 62903331 GCATTCATCCAAATCTTTGC 58 NA Mus musculus 50 C230021P08Rik ENSMUSG00000023009 ENSMUST00000023747 2 1 1 86 15 99263252 99263890 CTACTGAACCAGAAGGACC 58 99263184 99263202 ACTCAACACCTGATTCTGC 59 NA Mus musculus 50 Pcdhgc5 ENSMUSG00000023036 ENSMUST00000066149 3 1 9 134 18 37887946 37887964 TAAGGATGAAGATGCTTGC 57 37992950 37992969 GTATCAAACTGGTTGTTGGG 59 NA DesignNoJunction Mus musculus 50 Amhr2 ENSMUSG00000023047 ENSMUST00000023809 2 1 1 80 15 102277533 102277670 GTTTCTCCCAGGTAATCCAG 59 102277713 102277731 CCTTGATGGCTACCATCTC 59 NA Mus musculus 50 ENSMUSG00000023482 ENSMUSG00000023482 ENSMUST00000024247 2 1 1 60 14 80172319 80172337 TCAGCATTACCACTTTCCC 59 80172360 80172379 GATACCTGGATACCTACGGA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rshl2b ENSMUSG00000023806 ENSMUST00000115754,ENSMUST00000024572 2 2 2 61 17 7112405 7112423 AAACTCAGGAATAGTGGCT 58 7109850 7112383 AGGAATCCTACCTCAATATCTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Agpat4 ENSMUSG00000023827 ENSMUST00000024594 1 1 1 98 17 12409746 12411856 ATCTTCTGTATGGCCTCCA 59 12411918 12411936 TTGTTTCCGTTTGTTGTCG 59 NA Mus musculus 50 Dnase1l2 ENSMUSG00000024136 ENSMUST00000088506 2 1 1 80 17 24579255 24579363 GAGCAAATTAACAGAGTGTCC 59 24579195 24579214 CATTTCCTTGTACTGGTCAC 58 NA Mus musculus 50 A630042L21Rik ENSMUSG00000024622 ENSMUST00000025524,ENSMUST00000091884 1 2 2 82 18 61301440 61306096 GGACATCTACACAGGTCTC 58 61301376 61301394 TAATCTGGTTCCGGATTGC 59 NA Mus musculus 50 Coro1b ENSMUSG00000024835 ENSMUST00000008893 1 1 1 80 19 4149530 4149866 CTTCCTCTAAACAAGACGG 57 4149910 4149928 GTCAATATCCAGAACAGGC 57 NA Mus musculus 50 Gsto1 ENSMUSG00000025068 ENSMUST00000026050 1 1 1 87 19 47933946 47933965 GTTAGGTCGAAGAGAAAGGA 58 47934015 47937881 AATTATCCATGCCCTCCTC 58 NA Mus musculus 50 Gfra1 ENSMUSG00000025089 ENSMUST00000026076 3 1 1 81 19 58344648 58374745 AATTACATCTGCAGATCTCG 57 58344586 58344604 CCTTAAGACAGTTGCTGAC 58 NA Mus musculus 50 Pfkfb4 ENSMUSG00000025648 ENSMUST00000051873,ENSMUST00000026738 2 2 3 88 9 108927589 108927607 AAATCCAGGATCACTACCC 58 108927659 108930045 GTCTTCATAGGACTCACCC 58 NA Mus musculus 50 Tmem47 ENSMUSG00000025666 ENSMUST00000026760 1 1 1 287 X 78316499 78329647 GATTGGCAGATTGCTACTC 58 78339918 78339936 GCAATAAAGAATGGCACCC 59 NA DesignNoJunction Mus musculus 50 Wnt10a ENSMUSG00000026167 ENSMUST00000006718 1 1 1 135 1 74840154 74840172 GAGACTCGGAACAAAGTCC 59 74847178 74847196 CCTTCAGTTTACCCAGAGC 59 NA DesignNoJunction Mus musculus 50 Pkp1 ENSMUSG00000026413 ENSMUST00000027667 3 1 1 80 1 137776468 137776487 AGAAAGATGCTACCTTGGAG 59 137774837 137776426 TCATACCATTGGACATCAGC 59 NA Mus musculus 50 Srp9 ENSMUSG00000026511 ENSMUST00000027792 1 1 1 83 1 184058871 184061475 GGATGATCTAGTTTGTTTGGTG 59 184061519 184061537 CGCATTAACTGACTGTGGA 59 NA Nonspecific Mus musculus 50 Mpzl1 ENSMUSG00000026566 ENSMUST00000111435,ENSMUST00000068705 3 2 2 131 1 167534866 167535751 TGGTGGAAATAGACAACCTG 59 167534754 167534773 GCTTCGAATGTTTCCTTCTG 59 NA Mus musculus 50 St6galnac6 ENSMUSG00000026811 ENSMUST00000113290,ENSMUST00000113282,ENSMUST00000095044,ENSMUST00000072111,ENSMUST00000081879 1 5 6 80 2 32464821 32467747 GATGAGTAGCAACAAAGAGC 58 32467790 32467808 GAGCTGTAGAGGATGAGGA 59 NA Nonspecific Mus musculus 50 Pdia3 ENSMUSG00000027248 ENSMUST00000028683 3 1 1 89 2 121258055 121258073 ACAAGGCAAGGACTTACTC 59 121258126 121259261 ATCATGACCCTGTTTCTCC 58 NA Mus musculus 50 Rtf1 ENSMUSG00000027304 ENSMUST00000028767 1 1 2 80 2 119526993 119531184 CTGAGGAAGGTGAAGTGTC 59 119531227 119531246 CTTCATCTTCTGACGAGGAG 59 NA Mus musculus 50 Acss1 ENSMUSG00000027452 ENSMUST00000028944 2 1 1 90 2 150450841 150451509 GTACCCAGGTTATTACTTCAC 57 150450771 150450790 ATTGATGACATCATCCATGC 58 NA Mus musculus 50 2310046K01Rik ENSMUSG00000027463 ENSMUST00000073228,ENSMUST00000109859,ENSMUST00000109861,ENSMUST00000109858 3 4 4 169 2 151833328 151833687 AGAAGTCCTTATCGTGCTC 58 151833820 151833838 TAACCAGTGGGAACATGAG 58 NA Mus musculus 50 Pfn2 ENSMUSG00000027805 ENSMUST00000066882 2 1 1 107 3 57649170 57649189 CTATACGTTGATGGTGACTG 57 57647223 57649101 TACAAAGACCAAGACTCTCC 58 NA Mus musculus 50 Tchhl1 ENSMUSG00000027908 ENSMUST00000029516 1 1 1 117 3 93273459 93273477 ATATTCCACAAGTACGCCA 58 93273558 93274069 CATGAAAGACATGTGGCTG 59 NA Mus musculus 50 Mapbpip ENSMUSG00000028062 ENSMUST00000029698 3 1 1 211 3 88356422 88356718 TGCTGCTGAATAATGAGGG 59 88354660 88354679 CATACATAGCAGAAGGTTGG 58 NA DesignNoJunction Mus musculus 50 Gpatch4 ENSMUSG00000028069 ENSMUST00000029707,ENSMUST00000050223 1 2 2 80 3 87856029 87858297 AAGTTTGTGAAGACAGCCA 59 87858341 87858359 GTTGTCAACATCACTGCAG 59 NA Mus musculus 50 Itga10 ENSMUSG00000028102 ENSMUST00000029744 1 1 1 80 3 96453070 96453501 GGAGCAGATACAGGTAGGA 59 96453545 96453563 TCCTTTGTTCGGAAGTCTC 59 NA Mus musculus 50 Epha7 ENSMUSG00000028289 ENSMUST00000108194,ENSMUST00000029964,ENSMUST00000080934,ENSMUST00000108191 2 4 4 81 4 28862971 28865756 ATGAGAAAGATCAACGGGA 58 28865798 28865819 CCCGGTTTCAGATTATTAATGG 59 NA Mus musculus 50 Aptx ENSMUSG00000028411 ENSMUST00000108104,ENSMUST00000108103,ENSMUST00000068125,ENSMUST00000030119 3 4 4 82 4 40644305 40644323 CCATTTGGAAGCTGTTGTG 59 40642448 40644259 TCAACTGTACTTGCTGTCG 59 NA Mus musculus 50 4930579C15Rik ENSMUSG00000028575 ENSMUST00000107097,ENSMUST00000030309 2 2 2 136 4 94592256 94592274 ACCTAGTGAATCCTCTCGT 59 94586759 94590368 AATCTGAGGCTGGAATTGG 59 NA Mus musculus 50 Hmgcl ENSMUSG00000028672 ENSMUST00000030432 1 1 1 80 4 135511579 135511598 TATAGAGGAGAGTTTCCAGC 57 135511641 135514646 GAGACATACCCTCTCACAG 58 NA Mus musculus 50 Mrps15 ENSMUSG00000028861 ENSMUST00000030675 1 1 1 92 4 125730792 125732212 AACATCGAAAGGACAAAGC 58 125732268 125732286 CATAGTTGGTCTGACGGAG 59 NA Mus musculus 50 Utp11l ENSMUSG00000028907 ENSMUST00000030738 2 1 1 92 4 124359717 124359735 AAATCAGAGCTCCATCTGC 59 124359554 124359662 ATCAAACCGTTCAACTTCCT 59 NA Mus musculus 50 Dvl1 ENSMUSG00000029071 ENSMUST00000030948 3 1 1 90 4 155229060 155229081 TACATTGGATCCATCATGAAGG 59 155229132 155229228 AGTTGACATCGTTCACCTG 59 NA Mus musculus 50 Ppm1g ENSMUSG00000029147 ENSMUST00000031032 2 1 1 80 5 31508457 31508476 TCCAAGTTCTTTGAGGACAG 59 31507488 31508415 GTCCTCACTACATTCCTCAC 59 NA Mus musculus 50 Tbc1d14 ENSMUSG00000029192 ENSMUST00000101273,ENSMUST00000031094,ENSMUST00000087550 1 3 3 80 5 36862025 36863107 TAACTGGGAAACCATGTGG 59 36861963 36861981 ACTTTGCCTCTTACACTCG 59 NA Mus musculus 50 Gabrb1 ENSMUSG00000029212 ENSMUST00000031122 2 1 1 80 5 72500005 72500025 ACTGATTACAATCCTGTCCTG 59 72500066 72513197 GTAGTGATTCCTAGTGCGAC 59 NA Mus musculus 50 Shroom3 ENSMUSG00000029381 ENSMUST00000113055,ENSMUST00000113054,ENSMUST00000113051 2 3 3 124 5 93391378 93393390 AAAGAGGAAAGGAGTTCTCTG 59 93393476 93393494 TAGTTGGCCAGGATATCCA 59 NA Mus musculus 50 1500011H22Rik ENSMUSG00000029463 ENSMUST00000031419 2 1 1 80 5 122814924 122816338 CTGTTCTTGTTACCAGTTCCT 59 122814864 122814884 CTTATTCAGCAGATCCTCCTC 59 NA Mus musculus 50 Pxn ENSMUSG00000029528 ENSMUST00000067268,ENSMUST00000086523,ENSMUST00000112060 2 3 3 80 5 116002220 116002238 CTGTGAGAAGGACTACCAC 59 116002282 116002786 GCTGTCACCACTTTATCCA 59 NA Mus musculus 50 Cabp1 ENSMUSG00000029544 ENSMUST00000112112 2 1 3 60 5 115626279 115636041 CTAAGAAACCTCTCAAGAAAGG 58 115625523 115626258 CTCGGAGCTCTTCAATCTC 59 NA DesignRelaxed Mus musculus 50 Rnf6 ENSMUSG00000029634 ENSMUST00000067837 3 1 1 106 5 147029544 147029565 CAGAGAAGAAGCCTATTATCAG 57 147027751 147029479 CCTCTGATGTTATTTCTCCAG 57 NA Mus musculus 50 Adcyap1r1 ENSMUSG00000029778 ENSMUST00000070736,ENSMUST00000070756 3 2 2 81 6 55422254 55422273 TGCTCAAATAGGTGAGATGG 59 55422317 55424567 TTCTGTCATCCAGACTTGG 58 NA Mus musculus 50 Cct7 ENSMUSG00000030007 ENSMUST00000032078 1 1 1 80 6 85414929 85415902 CACAGTGGAGGATTACCAG 59 85415945 85415964 CCAGACTGATGGATCTTCTC 59 NA Mus musculus 50 Adamts9 ENSMUSG00000030022 ENSMUST00000113438,ENSMUST00000049189 3 2 2 84 6 92746229 92746353 CCGCTAAAGGTATTCTGTG 57 92746163 92746181 AGAAGTTCTCTGAGTCACC 58 NA Mus musculus 50 Prok2 ENSMUSG00000030069 ENSMUST00000032152 2 1 2 134 6 99672547 99672565 AGCATAAGGATCTGCACAC 59 99662443 99664423 AAATGGAACCTCCTTCTTCC 59 NA Mus musculus 50 Clec12b ENSMUSG00000030158 ENSMUST00000032261 3 1 1 82 6 129329984 129330003 CTGGAGTGATAGCAGAAAGG 59 129329647 129329940 GAAGGAGATCCCTTTCTTCG 59 NA Mus musculus 50 Rad51ap1 ENSMUSG00000030346 ENSMUST00000112221 3 1 1 80 6 126876426 126876444 AACAGTGCAGAAGAAACCT 59 126875073 126876383 TCTACTGAAGTCACTGATGC 59 NA Nonspecific Mus musculus 50 D6Wsu163e ENSMUSG00000030347 ENSMUST00000032497 1 1 1 81 6 126917038 126917057 TGCTGTACCCATGATATCAC 59 126917098 126923592 ACCAAGGTATAGTCATTTCCTC 59 NA Mus musculus 50 Slc27a5 ENSMUSG00000030382 ENSMUST00000032539 2 1 1 118 7 13573996 13574094 CATCCGTATCCAGGATTCC 59 13573896 13573915 TGTTGTCCAGTATGTAGAGG 58 NA Mus musculus 50 Siglecg ENSMUSG00000030468 ENSMUST00000005592 1 1 1 82 7 50664877 50665882 GACTAAGAGTGGCCTATGC 59 50666314 50666332 ATTCTCATGCAAGTCTGGG 59 NA Mus musculus 50 Mphosph10 ENSMUSG00000030521 ENSMUST00000032735,ENSMUST00000098394 1 2 2 88 7 71522115 71522133 ATCAGTCTAAGTCCAGCAG 58 71521682 71522064 TCGTTCATCCTTTAACAAGG 57 NA Mus musculus 50 Myh14 ENSMUSG00000030739 ENSMUST00000048102,ENSMUST00000107900,ENSMUST00000107899 2 3 3 80 7 51909415 51910600 TCGAGACCTATCTGTTGGA 59 51909353 51909372 GCAGCTGGTAGAAGATATGG 59 NA Mus musculus 50 Lyve1 ENSMUSG00000030787 ENSMUST00000033050 1 1 1 102 7 118003009 118003116 TTGAGACTTGCAGCTATGG 59 118002925 118002943 CAAATCAGGACACCTTTGC 59 NA Mus musculus 50 Uros ENSMUSG00000030979 ENSMUST00000106144 2 1 4 97 7 140884332 140889362 TATTTGCTCAAATGGCCTC 58 140884253 140884272 TAGGTAAGAACTGAGATGCG 58 NA Mus musculus 50 Uros ENSMUSG00000030979 ENSMUST00000106144 3 1 4 98 7 140884332 140889363 ATATTTGCTCAAATGGCCTC 58 140884253 140884272 TAGGTAAGAACTGAGATGCG 58 NA Mus musculus 50 Rpgr ENSMUSG00000031174 ENSMUST00000072393,ENSMUST00000115539,ENSMUST00000115534,ENSMUST00000044598,ENSMUST00000073392,ENSMUST00000115533,ENSMUST00000115536,ENSMUST00000115532,ENSMUST00000115531,ENSMUST00000115530 2 10 13 81 X 9787874 9788934 AGTTTCAACAGATACTGGTGG 59 9787813 9787831 TCTATCGTCAGTGTCACCA 59 NA Mus musculus 50 3830417A13Rik ENSMUSG00000031179 ENSMUST00000033522 2 1 1 111 X 61429179 61429975 AACAATCCAGGCATTAGTC 57 61430618 61430636 GTTGTTCTCAGTAGGTTCC 57 NA InUTR Mus musculus 50 Gabre ENSMUSG00000031340 ENSMUST00000064780,ENSMUST00000114557 2 2 2 83 X 69507837 69507856 AACACTTGGAAGCTATTGGA 59 69503895 69507791 CATGAAGTCACCAAATGGG 58 NA Mus musculus 50 Arhgap6 ENSMUSG00000031355 ENSMUST00000112129 2 1 6 172 X 165694556 165695589 ATCAACACTCTCCTGTTGG 59 165695725 165695743 TAGCAGCATACCTCTTGTC 58 NA Mus musculus 50 Mfap3l ENSMUSG00000031647 ENSMUST00000034066 2 1 1 63 8 63135668 63135686 GAGAAGGAGAAAGGAGGAG 58 63149847 63149865 CCTTGGTGATGTTCAGGAG 59 NA DesignNoJunction Mus musculus 50 Rbl2 ENSMUSG00000031666 ENSMUST00000034091 2 1 1 80 8 93602832 93607206 TATATGCGAAAGGGAACTTCC 59 93607247 93607266 CTAAATCTAATGCGCACAGC 59 NA Mus musculus 50 Cdh13 ENSMUSG00000031841 ENSMUST00000109073,ENSMUST00000034302 2 2 2 81 8 121375760 121491958 GCTACTTATCAACTGTATGTGG 58 121492000 121492018 TCACAATGACTTCCAGAGG 58 NA Mus musculus 50 Pou2f3 ENSMUSG00000032015 ENSMUST00000034513 1 1 1 80 9 42942720 42945395 GAGAAGCGATTTCAAGATAACC 59 42942661 42942681 CTCCTTCTCCATCGATAACTG 59 NA Mus musculus 50 Cryab ENSMUSG00000032060 ENSMUST00000093849 1 1 1 111 9 50561485 50561503 CTGACCTCTTCTCAACAGC 59 50561578 50562630 TTCTCCAAACGCATCTCTG 59 NA Mus musculus 50 Tex12 ENSMUSG00000032065 ENSMUST00000034568 1 1 1 89 9 50366397 50366501 GATTTGAGCGATATGAGCA 57 50365569 50365588 GTAAGATGCATCTACTGCTG 58 NA Mus musculus 50 Tmprss4 ENSMUSG00000032091 ENSMUST00000034599 2 1 1 84 9 44985845 44985863 GTACAACAAGCAGCATGTC 59 44984626 44985799 AAGATACTTCCTGAAGCAGTG 59 NA Mus musculus 50 Tmod2 ENSMUSG00000032186 ENSMUST00000064433,ENSMUST00000098552 3 2 2 80 9 75424500 75424519 TACCAGTTTACCAAGCAAGG 59 75421917 75424457 TCTCTTCTTTCGAACCAGG 58 NA Mus musculus 50 Sltm ENSMUSG00000032212 ENSMUST00000085386,ENSMUST00000049263 2 2 2 81 9 70428663 70429115 CAGATATGAGAAAGGTCATGG 57 70429157 70429176 CCTTCTGTAGTCTTTGTCTC 57 NA Mus musculus 50 Bckdhb ENSMUSG00000032263 ENSMUST00000116537,ENSMUST00000034801 2 2 3 120 9 83906205 83906223 GGATGTGGATACAGTTTGC 58 83962792 84015852 GAAACATTCTTCCTGGACC 58 NA Mus musculus 50 Imp3 ENSMUSG00000032288 ENSMUST00000034827 1 1 1 163 9 56785648 56785666 CTACTTTGCTCCTCAAGCT 59 56785793 56785811 GATCTTGGATGAGTCCACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Armc8 ENSMUSG00000032468 ENSMUST00000035043 3 1 1 80 9 99433599 99436221 TGTATACAGATGCTACGGT 57 99433537 99433555 TCTGGCAGATATACTCCTG 57 NA Mus musculus 50 Slco2a1 ENSMUSG00000032548 ENSMUST00000035148,ENSMUST00000112818 2 2 2 100 9 102974951 102975484 GGATTTCATTAAACGGTTCCC 59 102975546 102975564 CAATGACTGAGGAGAAGGT 58 NA Mus musculus 50 Nphp3 ENSMUSG00000032558 ENSMUST00000116516,ENSMUST00000035167 1 2 4 80 9 103925124 103925756 GATCAAGTTCAGCAAGTGG 58 103925798 103925818 CACAGAAACAATGACTCTGAC 59 NA Mus musculus 50 Slc25a20 ENSMUSG00000032602 ENSMUST00000035222 1 1 1 80 9 108579992 108582423 AATGCTTACTGCAGATTCAG 58 108582466 108582484 CCTGATACAGCTTCTTTGC 58 NA Mus musculus 50 1700025G04Rik ENSMUSG00000032666 ENSMUST00000044581 1 1 1 115 1 153827566 153827584 AAATAGCAGCCAGAAACCA 59 153762663 153768185 GATGTGCATGTTTGCTCTG 59 NA Mus musculus 50 Gm106 ENSMUSG00000032719 ENSMUST00000040695 1 1 1 80 1 15850393 15850412 TCTGTCTTCAACAAGAAGAG 57 15849137 15850350 CATACAGTATCCAGCATCC 57 NA Mus musculus 50 1700009J07Rik ENSMUSG00000032928 ENSMUST00000044816 3 1 1 163 10 77356479 77356497 ATCTCACTTGGCAATGACC 59 77356624 77356642 TAGTCATTGCCAACTGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 3830406C13Rik ENSMUSG00000033111 ENSMUST00000039207 2 1 2 198 14 13119900 13130108 TCTTGAAGGACATAGATGCTG 59 13133758 13133777 GTTTGAACGAATGGTACCTC 58 NA Mus musculus 50 Pcgf3 ENSMUSG00000033623 ENSMUST00000112597,ENSMUST00000046975 3 2 2 80 5 108904156 108904175 TGGAGGAGAATAATACCTGC 58 108904215 108907332 TTCTGTCATGACCGATATACTG 59 NA Mus musculus 50 Fstl5 ENSMUSG00000034098 ENSMUST00000038364 2 1 1 80 3 76340272 76392874 TCTTCCAAGTGAATGTTCCTC 59 76392916 76392934 TAAGGCTTGCAGTTACACC 59 NA Mus musculus 50 Chmp7 ENSMUSG00000034190 ENSMUST00000036381 3 1 1 95 14 70118388 70118407 GCTTTATACCAACAGTGTGC 59 70118098 70118330 GGGATCAAACCTCCTTCTG 59 NA Mus musculus 50 Ppp1r1c ENSMUSG00000034683 ENSMUST00000090760,ENSMUST00000040863 2 2 3 115 2 79548374 79548393 TATTCCAGAGTCAGATTGCC 59 79550115 79648475 TTTCAGATGCTTAACGCCT 59 NA DesignNoJunction Mus musculus 50 Ccdc122 ENSMUSG00000034795 ENSMUST00000048208 3 1 2 95 14 77468672 77468690 TGATGCTGTAGAGCAAGTC 59 77468748 77491485 TGAAGTTCAATCTGCAACTG 58 NA Mus musculus 50 Cpne7 ENSMUSG00000034796 ENSMUST00000037900 2 1 1 83 8 125648302 125648321 GTGATAGCAGAGGACATCTC 59 125648367 125649470 GAAGAGGTCCTTGTCATCC 59 NA Mus musculus 50 Plvap ENSMUSG00000034845 ENSMUST00000048452 3 1 1 93 8 74032427 74032445 CTATAATCGCTTCATCGCC 58 74032196 74032370 GAAGAGTAAAGCTTCGCAG 58 NA Nonspecific Mus musculus 50 Nudt19 ENSMUSG00000034875 ENSMUST00000040962 3 1 1 81 7 36336520 36336538 AAGTACCTGAGAAATGGCT 58 36333127 36336475 ACATACAGCTCATCTCCTG 58 NA Mus musculus 50 Plekhh3 ENSMUSG00000035172 ENSMUST00000043397,ENSMUST00000107291 3 2 2 89 11 101029602 101029967 CATCTCAGACAGACTGCAG 59 101029531 101029549 TTCACAATGATGTCAGGGT 58 NA Mus musculus 50 1700072E05Rik ENSMUSG00000035454 ENSMUST00000047945 3 1 1 61 X 83290142 83291888 AAGATTTGCTGTGTCAAAGG 58 83291912 83291930 CTGTTAGGCTGCAAATGAG 58 NA DesignNoJunction Mus musculus 50 Sbno2 ENSMUSG00000035673 ENSMUST00000042771,ENSMUST00000092316 3 2 2 87 10 79532786 79535109 ATGACAAGCTGTTCATACC 57 79532717 79532735 TAGCTGATGAGAAGTGGAG 58 NA Mus musculus 50 Ugt2b35 ENSMUSG00000035811 ENSMUST00000031186 3 1 1 87 5 87432421 87433875 CCTTGCCTAAGGAAATGGA 59 87433926 87433944 ATGTTACTGACCATCGACC 59 NA Mus musculus 50 Bbs9 ENSMUSG00000035919 ENSMUST00000115296,ENSMUST00000039798 2 2 2 80 9 22433554 22440062 AAAGTTGCAAGGTGTTTGG 59 22440105 22440124 GAATCCAGGGTAGAAGACAC 59 NA Mus musculus 50 Fbxw2 ENSMUSG00000035949 ENSMUST00000113080,ENSMUST00000028220,ENSMUST00000113081,ENSMUST00000113078,ENSMUST00000091020,ENSMUST00000113077,ENSMUST00000113075 2 7 8 80 2 34662960 34664044 ATGAGATCAAGATTTGGCC 57 34662898 34662918 TACTTCTATCCTCAGAGACAG 57 NA Mus musculus 50 Tmem63b ENSMUSG00000036026 ENSMUST00000039445,ENSMUST00000113523 3 2 2 80 17 45811205 45812349 CATCTTCAGGATAAAGGACGA 59 45811145 45811164 ATGTGTCTTTGGAAGGACAG 59 NA Mus musculus 50 Surf6 ENSMUSG00000036160 ENSMUST00000114043,ENSMUST00000047632 3 2 2 118 2 26755337 26755355 TCACAAGACTAAAGCCCTG 59 26754934 26755255 TGCCTTGGCTATCTTTAGG 59 NA Mus musculus 50 H2-Ea ENSMUSG00000036322 ENSMUST00000040306 1 1 1 104 17 34480646 34480664 CCACTTTCTGACCTTCCTG 59 34480023 34480579 TTCTCTTCAAACTCCCAGTG 59 NA Mus musculus 50 BC043098 ENSMUSG00000037503 ENSMUST00000047534 1 1 1 83 1 34876846 34885621 TTCCAAACAGGCTACACTC 59 34876781 34876799 GGAAGAGGAGTATGGTGGA 59 NA Mus musculus 50 Inpp4b ENSMUSG00000037940 ENSMUST00000042529,ENSMUST00000109853,ENSMUST00000109852,ENSMUST00000109851 3 4 4 80 8 84476144 84476163 TTCTCACTGTGATCAAATGG 57 84476206 84476602 GATTTGAAAGAGGACCCTG 57 NA Mus musculus 50 Usp38 ENSMUSG00000038250 ENSMUST00000042724 1 1 1 80 8 83519631 83519650 GGTTCACTGTATGATGTACC 57 83517278 83519589 TTAGGAAAGTCCTTTACTGC 57 NA Mus musculus 50 Cd160 ENSMUSG00000038304 ENSMUST00000107074,ENSMUST00000047702 2 2 2 92 3 96606326 96609473 GTTCTAGTCACAGGGAACC 59 96606252 96606270 GAAGCCTGAACTGAGAGTG 59 NA Mus musculus 50 Cyp24a1 ENSMUSG00000038567 ENSMUST00000038824 2 1 1 80 2 170319664 170320834 AAATCAATGAGGTCTTGGCT 59 170319603 170319621 TGTACAAGTCTTGGATGCG 59 NA Mus musculus 50 Slc35f1 ENSMUSG00000038602 ENSMUST00000105473 1 1 1 137 10 52652945 52652963 TTTGTGGAATTGGCTTGAC 58 52653064 52741658 TTTCTTCTCCTTGTCGGAC 59 NA Mus musculus 50 Rsad1 ENSMUSG00000039096 ENSMUST00000040487 1 1 1 120 11 94409866 94409887 GCAACTTCAATAAGTACATCCC 59 94409660 94409787 AAGAACACAGACTCTACTCTC 58 NA Mus musculus 50 Srrm2 ENSMUSG00000039218 ENSMUST00000090276,ENSMUST00000088621,ENSMUST00000073292 3 3 3 81 17 23960861 23960990 GATCTACAGAGCAGTGAGC 59 23961035 23961053 GTGTCTCCTTCCTCTTGTG 59 NA Mus musculus 50 Edaradd ENSMUSG00000039309 ENSMUST00000041383 3 1 1 90 13 12599584 12600651 CTTTATCCTTTGCCATGTCAG 59 12592843 12592861 GGACAGTTGGAATTGACTG 58 NA Mus musculus 50 Ptger4 ENSMUSG00000039942 ENSMUST00000047379 2 1 1 73 15 5192299 5192317 GTCATCTTACTCATCGCCA 59 5185206 5192262 TTAATGAACACTCGCACCA 59 NA DesignNoJunction Mus musculus 50 C030048B08Rik ENSMUSG00000040302 ENSMUST00000042753 1 1 1 80 5 3595307 3595325 CTAGATGAATACCCAGCGG 59 3591806 3595263 CTTAGCTACCCTTGCACTC 59 NA Mus musculus 50 Blvrb ENSMUSG00000040466 ENSMUST00000108358,ENSMUST00000037399,ENSMUST00000108357 3 3 3 65 7 28247661 28247679 AGATTCTGCAAGAGTCAGG 58 28247708 28250750 GTGGTTGGTCTCCTATGTG 59 NA DesignRelaxed Mus musculus 50 Reps2 ENSMUSG00000040855 ENSMUST00000112334,ENSMUST00000101102,ENSMUST00000039359 1 3 3 82 X 158990528 158990546 CTCATTACCAGAGGGTGTC 59 158984771 158990482 TTCATATGGAGCTGGATGC 59 NA Mus musculus 50 D19Bwg1357e ENSMUSG00000041360 ENSMUST00000076219 1 1 1 80 19 27494600 27495794 TTTACAAGTCAGCAGATCAC 57 27494539 27494557 TCTCGTCCATGATAAGCTC 58 NA Mus musculus 50 Ccdc9 ENSMUSG00000041375 ENSMUST00000041010 1 1 1 80 7 16866284 16867717 CGAAAGTCTAAGGAGTGGG 59 16866222 16866241 ATATTCGGCAATCTTCTCCA 58 NA Mus musculus 50 Mmrn2 ENSMUSG00000041445 ENSMUST00000111908 3 1 1 82 14 35209406 35209424 ACAGAGAAATTCCTGGTCC 58 35209469 35209566 ACTCGATACATGACTCTGAC 58 NA Mus musculus 50 Stx3 ENSMUSG00000041488 ENSMUST00000047698,ENSMUST00000075304,ENSMUST00000069285,ENSMUST00000112965,ENSMUST00000112964 3 5 5 112 19 11860003 11860182 CTTCTGGGATCATTGACTCC 59 11859910 11859928 AAACATGTCATGGAGCTCC 59 NA Mus musculus 50 Ptchd2 ENSMUSG00000041544 ENSMUST00000047720,ENSMUST00000097784 2 2 2 83 4 147635300 147644494 GTCCACTAGCAAAGTCCAG 59 147635235 147635254 AGCATGTCGTTATTGAAGGT 59 NA Mus musculus 50 Tram2 ENSMUSG00000041779 ENSMUST00000037998 3 1 1 92 1 20996310 20996946 ATGTGTACCTCTCCTTCCA 59 20996236 20996254 GCACCTTCTGGAAGTAGAG 59 NA Mus musculus 50 Phlda3 ENSMUSG00000041801 ENSMUST00000038945 2 1 1 109 1 137663232 137663250 CTACTTCACGCTAGTGACC 59 137663322 137663341 GATTCTTGAACTTGACCAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hoxd11 ENSMUSG00000042499 ENSMUST00000048086 2 1 1 62 2 74520926 74520944 CTCTAACTTCTACAGCGCC 59 74520970 74520988 TAGAACTGATCAAAGCCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 1700019D03Rik ENSMUSG00000043629 ENSMUST00000114493,ENSMUST00000114492,ENSMUST00000050567 1 3 3 60 1 52982291 52982311 GTCAATATAGGACACCTTCTC 57 52982251 52982270 GGGAGTTTCTTTACTTCCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mgat5b ENSMUSG00000043857 ENSMUST00000054088,ENSMUST00000103027,ENSMUST00000092400 2 3 3 81 11 116839782 116844911 CATGAACACCCAGGTAGAC 59 116844955 116844974 TTGGATGTAGGCATTGATCC 59 NA Mus musculus 50 4930441O14Rik ENSMUSG00000044081 ENSMUST00000049518 2 1 1 226 13 67854101 67854119 AGCAGTTCTTTCTAGCTCC 58 67855693 67855711 TATTCTATGACAGGCCCAG 58 NA DesignNoJunction, InUTR Mus musculus 50 Aqp5 ENSMUSG00000044217 ENSMUST00000042340,ENSMUST00000088200 2 2 2 86 15 99423729 99423747 TGGTCATGAATCGGTTCAG 59 99424602 99424621 TAGAAGTAGAGGATTGCAGC 58 NA DesignNoJunction Mus musculus 50 Ctla2a ENSMUSG00000044258 ENSMUST00000021880 3 1 1 173 13 61037335 61037354 GAATGGAAGACGAAATTTGC 58 61036799 61036913 GAATTCTTCTGGAGTCAAGTC 58 NA Mus musculus 50 Cnr1 ENSMUSG00000044288 ENSMUST00000057188,ENSMUST00000084736 1 2 2 60 4 34031106 34031124 ACAGCTTTGTTGACTTCCA 59 34031147 34031166 TTGAACAGAAACACATTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 B530045E10Rik ENSMUSG00000044633 ENSMUST00000060657 1 1 1 60 10 98884628 98884648 TCTTTCTAGAACCCTATGCAG 58 98884670 98884688 TCACTTGAGTTCTCTGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rg9mtd1 ENSMUSG00000044763 ENSMUST00000059052 2 1 1 60 16 56035127 56035146 GACAAAGATGAAGATTCCCT 57 56035086 56035104 CAAGCAATCTCCACATCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lrfn4 ENSMUSG00000045045 ENSMUST00000113822 3 1 2 153 19 4613280 4613300 CTTTAGAATCTGAACCAGCAG 58 4612630 4613166 GGTACAATCCGGTAGATGAG 59 NA Mus musculus 50 Kcng3 ENSMUSG00000045053 ENSMUST00000051482 3 1 1 93 17 83987701 84030304 GGGATAATTGAAGCTATCTGC 58 83987628 83987647 GTCTCTTGACAAACTCACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pigw ENSMUSG00000045140 ENSMUST00000108080,ENSMUST00000067058 1 2 2 60 11 84691386 84691404 ATCGCTGTATTCTGTCTGG 59 84691344 84691364 CTTTATAATGACCAACCGTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Wdr81 ENSMUSG00000045374 ENSMUST00000051512,ENSMUST00000100845 3 2 2 156 11 75263034 75263311 ATCTTGTTATGTTGGGCCC 59 75262896 75262914 ATACAGGTAGGCAATGTGG 59 NA Mus musculus 50 Hnrph2 ENSMUSG00000045427 ENSMUST00000050331,ENSMUST00000059297 3 2 5 114 X 131137290 131137465 CAGGGTCAAAGGATAATTCCT 59 131139433 131139451 ATCATGGTGACTGATGGAC 59 NA InUTR Mus musculus 50 Sprn ENSMUSG00000045733 ENSMUST00000059241 3 1 1 215 7 147339404 147339422 ATCAAGAGTACGCGTAAGG 59 147339207 147339225 CAGTAGCTGTAGACTCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC022623 ENSMUSG00000046546 ENSMUST00000059078 1 1 1 60 16 30601701 30601720 CATCACTTCCTCTGTCAGTC 59 30601741 30601761 CTAATAAGCTGTGACAGTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ddit4l ENSMUSG00000046818 ENSMUST00000053855 1 1 1 80 3 137287224 137288935 GAGTCTGCTAAGTGATTTCG 58 137288976 137288996 GTTGTCTCTTCAAATACCACC 58 NA Mus musculus 50 Irs3 ENSMUSG00000047182 ENSMUST00000057314 2 1 1 126 5 138086423 138086441 TCATCTATACCAGCGACAG 58 138085969 138086333 AAACCCATAGCAGTAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem93 ENSMUSG00000047260 ENSMUST00000054952,ENSMUST00000108480 2 2 2 60 11 72990040 72990059 CTACGGCTTCATCTTCTACC 59 72989999 72990017 TTTGAGAATGAGGAGCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930564C03Rik ENSMUSG00000048820 ENSMUST00000052701 1 1 1 60 17 45017019 45017037 AATCAAAGACCACCAGGAG 59 45016977 45016995 TTTGAGTCTTTGCTCTGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp2 ENSMUSG00000049321 ENSMUST00000116378,ENSMUST00000109129,ENSMUST00000077686,ENSMUST00000109128 1 4 5 137 11 50719604 50719622 GAGGATCTCCTAGACTGGG 59 50714691 50714709 GAATGCCAGAGATCTTCCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Cox7b2 ENSMUSG00000049387 ENSMUST00000050129 1 1 1 99 5 71834502 71894701 CTGACTTTGCAGATCTCTG 57 71834421 71834439 TTTAGTGCATATCTGGCCA 58 NA InUTR Mus musculus 50 Ceacam19 ENSMUSG00000049848 ENSMUST00000052605 2 1 1 122 7 20468197 20468216 GTCACTACTTGTATGTGGCA 59 20467239 20467932 TTGCTGTCACCAGATTCAG 59 NA Mus musculus 50 Olfr1378 ENSMUSG00000050343 ENSMUST00000052285 2 1 1 60 11 50782539 50782558 GTCAACAGCCATAGAATTCC 58 50782581 50782599 GACCTCTTCCTCCTTTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC048562 ENSMUSG00000050641 ENSMUST00000057265 3 1 1 158 9 108347573 108348000 ACTTCCTTCGACAAAGGTC 59 108348122 108348140 GAAGTCAGTCTGGTAGGAC 58 NA DesignRelaxed Mus musculus 50 Emilin3 ENSMUSG00000050700 ENSMUST00000109454,ENSMUST00000057169 3 2 2 218 2 160735561 160736490 CTTCAACAGTCAGGTACCG 59 160735361 160735379 CTCTGCTGTAAGGAGAAGG 59 NA DesignRelaxed Mus musculus 50 Gja10 ENSMUSG00000051056 ENSMUST00000056517 3 1 1 60 4 32688848 32688867 GATCAGTGCTAGAAGTAGGG 58 32688807 32688826 TGCATTTGAAACCCATAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pcmtd1 ENSMUSG00000051285 ENSMUST00000061280 2 1 1 106 1 7151048 7151066 AATTTACTGTGGAGCTGGA 58 7151136 7153338 TCTGTGTCAACTGATCCTC 58 NA Mus musculus 50 Ncald ENSMUSG00000051359 ENSMUST00000090150 1 1 1 78 15 37301922 37301940 CCTGAAGATGAATCAACCC 57 37298672 37301882 AGAGCTTTCCATCTCTATTGG 59 NA DesignRelaxed Mus musculus 50 Olfr272 ENSMUSG00000051593 ENSMUST00000107667 1 1 2 151 4 52924682 52929417 ACAGAAAGAGTTCTGCTGG 59 52924549 52924569 AGGATCATCAGATACATGCAC 59 NA InUTR Mus musculus 50 F730043M19Rik ENSMUSG00000052125 ENSMUST00000063828 2 1 2 196 12 33832004 33832023 GGAAATGGACATAACTCCGA 59 33824643 33825831 TGGGTCATAATGGCTATGTC 59 NA InUTR Mus musculus 50 Opa3 ENSMUSG00000052214 ENSMUST00000063976 1 1 1 73 7 19813901 19813919 TCAAGACCTACATCTGCCT 59 19830125 19830143 CATTATGCGCATCTTCGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tchh ENSMUSG00000052415 ENSMUST00000064257 2 1 1 61 3 93251785 93251804 CAAGAAGAGGAACAAAGACG 58 93251828 93251846 CGGATTTGCTCTTCTTGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700036A12Rik ENSMUSG00000052481 ENSMUST00000064351 2 1 1 60 9 60617456 60617474 GATCAACGATTACCCAGGT 59 60617498 60617516 ATAGACAACATTTGCAGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 9030619P08Rik ENSMUSG00000053168 ENSMUST00000096397 2 1 1 145 15 75261836 75261854 CATGCTACAAAGTCCTGTG 58 75258600 75260390 TCTGAGAGTCATCCATTCAG 58 NA InUTR Mus musculus 50 Pom121 ENSMUSG00000053293 ENSMUST00000111171 3 1 1 103 5 135856866 135856884 AAGTCTGAGTCAGAACACC 58 135854619 135856799 TAGATGTGCCTCCAAACAC 59 NA Nonspecific Mus musculus 50 A530088E08Rik ENSMUSG00000053467 ENSMUST00000065921 2 1 1 62 17 32540457 32540476 CTCCCTTACCTTGATTTCCT 58 32540501 32540519 GAAGCTAGGCACAGTACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fate1 ENSMUSG00000053593 ENSMUST00000114568 2 1 3 60 X 69233766 69233786 AGAGTGATTTCTGTTCACCAG 59 69233807 69233826 CCAGAAGTCATTTGCATCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bcl2a1c ENSMUSG00000053820 ENSMUST00000066460 2 1 1 68 9 114239316 114239335 CACTACCTTCAGTATGTGCT 59 114239366 114239384 TAGCACTCTGAATGCTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 H2-T24 ENSMUSG00000053835 ENSMUST00000116595,ENSMUST00000066488,ENSMUST00000113760 2 3 3 60 17 36151639 36151760 CTTGTTCTGAAATGGGAGC 58 36151597 36151616 CCCTAGCATATACTCCTGTC 58 NA DesignNoJunction Mus musculus 50 2810030E01Rik ENSMUSG00000054074 ENSMUST00000091420,ENSMUST00000066885 2 2 2 60 2 17968312 17968332 GGTATCTGAGATTACATTCCC 57 17968272 17968291 CAGGTCAGTTCTCTTTACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 A930005H10Rik ENSMUSG00000054426 ENSMUST00000067500 2 1 1 258 3 115590977 115590996 CTATAGAGCGATCGCATACC 59 115590738 115590756 ATTCAAAGCTGAGCAAACG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Vapb ENSMUSG00000054455 ENSMUST00000067530 3 1 1 84 2 173587760 173597032 CAATGTGTCTGTGATGTTACAG 59 173597076 173597095 AGCAAACATAGACTGAACCA 59 NA Mus musculus 50 Olfr1365 ENSMUSG00000054890 ENSMUST00000068163 2 1 1 60 13 21647402 21647421 GGTTATAACTGCTTGCTCAC 58 21647361 21647379 TCATGGTCAATGCTGTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Klhl5 ENSMUSG00000054920 ENSMUST00000101192,ENSMUST00000031089,ENSMUST00000101191,ENSMUST00000031085 2 4 4 118 5 65535890 65535908 TTCTTGATGAAGCAGCTCC 59 65535989 65539841 TCCATGAAATGTTCCATCGT 59 NA Mus musculus 50 Cntn1 ENSMUSG00000055022 ENSMUST00000000109,ENSMUST00000068378 1 2 2 80 15 92050896 92059059 GATATGGTCATGGAGTGTCTG 59 92059098 92059119 CTGGGTAAATGGTATTGATTGG 59 NA Mus musculus 50 0610012H03Rik ENSMUSG00000055312 ENSMUST00000068813 1 1 1 88 2 105124834 105137893 GAATCACAGGAATTCTGACG 58 105137944 105137962 ATGTAGATACGGAACGAGC 58 NA Mus musculus 50 Zfp457 ENSMUSG00000055341 ENSMUST00000049705,ENSMUST00000068871 3 2 2 61 13 67397268 67397286 TACAGGGATGTGACATTGG 58 67396763 67397243 TTAGAAGAAGCAAGACCCA 58 NA DesignRelaxed Mus musculus 50 Zfp709 ENSMUSG00000056019 ENSMUST00000034259 1 1 1 196 8 74411517 74411536 CAGAACATAGATGAGGACCA 58 74412953 74412971 CTAATGAGCACGTTGTCCT 59 NA DesignNoJunction Mus musculus 50 Pla2g4a ENSMUSG00000056220 ENSMUST00000070200,ENSMUST00000111926 1 2 2 80 1 151727171 151727189 TGAAGGCACTGTATGAGTC 58 151719880 151727127 TTGACATGTACCATGTGGA 58 NA Mus musculus 50 Higd1c ENSMUSG00000056487 ENSMUST00000075675,ENSMUST00000088142 1 2 3 94 15 100183688 100183706 GTTTCCCATGTTTCTGCTG 59 100183764 100183782 TGTATATCATGGCGAACCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 9130221D24Rik ENSMUSG00000056559 ENSMUST00000070741 3 1 1 82 3 132839387 132839407 CAAATATCAGCCAAGCTACTG 59 132823821 132839345 AATACCTCTCCGATTACTTGC 59 NA Mus musculus 50 Olfr1484 ENSMUSG00000057213 ENSMUST00000074180 3 1 1 78 19 13660621 13660640 TTCTACACCATGGTCATTCC 59 13660681 13660699 TCCTGACTGCATTCTTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Aak1 ENSMUSG00000057230 ENSMUST00000089519,ENSMUST00000003710 3 2 2 82 6 86931319 86931337 GACACTTCTCTTCTGCTCC 59 86931382 86932545 TCAGCTTTGTCAATAACAGC 58 NA Mus musculus 50 Olfr191 ENSMUSG00000057533 ENSMUST00000078517 3 1 1 63 16 59085980 59085999 ATTTGTAGTGAGTGCAACCA 59 59085936 59085954 TACATAGCGATCATAGGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Xlr3a ENSMUSG00000057836 ENSMUST00000114524 3 1 2 110 X 70339583 70340309 CAGAACCCAGCTAACAGAG 59 70338613 70338632 GAATTCTTGGACCAAGTCCT 59 NA Mus musculus 50 Ces7 ENSMUSG00000058019 ENSMUST00000077816 1 1 1 81 8 96040870 96043418 TACATATTGCCCGTGAGAG 58 96040807 96040828 GCAAAGTATGTATCAAGGTGAG 59 NA Mus musculus 50 Upf1 ENSMUSG00000058301 ENSMUST00000075666 1 1 1 80 8 72864501 72864519 AGTACCAGAACATCTTCGG 58 72863989 72864458 TATCTTGAGTCTGTGACTCC 58 NA Mus musculus 50 Fbxo18 ENSMUSG00000058594 ENSMUST00000114813,ENSMUST00000102966,ENSMUST00000114808,ENSMUST00000071564 2 4 4 80 2 11688794 11688812 GGACCTCTACTGGAATCTC 58 11685844 11688751 TTCTTCCAAGGAATGAACAG 57 NA Mus musculus 50 Fbxo18 ENSMUSG00000058594 ENSMUST00000114813,ENSMUST00000102966,ENSMUST00000114808,ENSMUST00000071564 3 4 4 80 2 11684505 11684525 GAGACCTTATACTGCATAGCT 58 11682188 11684466 GTTGTAGTGAATCCTATTGCTG 59 NA Mus musculus 50 Nfe2 ENSMUSG00000058794 ENSMUST00000075192 2 1 1 99 15 103081427 103081445 GGAACAGGTTATCACAGCT 59 103079866 103081364 GGAACATTTAGACCCTGCA 59 NA Mus musculus 50 Gzmd ENSMUSG00000059256 ENSMUST00000082093 3 1 1 116 14 56748652 56749051 AAGACTCCTTTCAAGGGTG 59 56748554 56748574 CACAACCTTAGTGAAGATTCC 58 NA Mus musculus 50 Olfr836 ENSMUSG00000059303 ENSMUST00000074986 2 1 1 60 9 18925723 18925744 CTGTTTGTACCATCTTTGAGTG 59 18925765 18925783 GCTATGAAGCGGTCATAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1385 ENSMUSG00000059729 ENSMUST00000071807 1 1 1 60 11 49308428 49308446 ACTACATGACCATCATGCA 58 49308470 49308488 CCTACCCATGAAGCAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnh7 ENSMUSG00000059742 ENSMUST00000075052,ENSMUST00000112454,ENSMUST00000112452 1 3 3 81 2 62715408 63020124 ATCACAAGAATGGTTCCAC 57 62715345 62715363 ATGAACATCATAGCCACAC 57 NA Mus musculus 50 Caln1 ENSMUSG00000060371 ENSMUST00000086029,ENSMUST00000111287,ENSMUST00000111288 3 3 3 82 5 131298831 131298851 ACATTATCATCAACGAGGAGG 59 131298895 131315166 TTTCTGCGAATGAACTCCT 59 NA Mus musculus 50 Sntb1 ENSMUSG00000060429 ENSMUST00000110200 2 1 2 246 15 55623793 55737586 GCTGGAAGTGAAGTATATGAG 57 55622806 55622824 TATGAGGTCACTAGGATGG 57 NA DesignNoJunction Mus musculus 50 Copz1 ENSMUSG00000060992 ENSMUST00000100162 2 1 1 64 15 103119592 103121115 TTCGCCAAGTACTATGACG 59 103121143 103121161 ATGTTCTTCTCAAAGGCCT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Olfr1168 ENSMUSG00000061342 ENSMUST00000079599 3 1 1 61 2 88025465 88025483 GCTGGAAGTTATATGTGGG 57 88025506 88025526 AGCTCTACAAGAGTGTATGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mospd2 ENSMUSG00000061778 ENSMUST00000112248,ENSMUST00000112247,ENSMUST00000004715 2 3 3 81 X 161402966 161402985 ATAACGTTGTGGATGAAACC 58 161401936 161402924 TCACTAAGGTCATTGACAGAG 59 NA Mus musculus 50 Tubb4 ENSMUSG00000062591 ENSMUST00000071135 3 1 1 116 17 57225738 57225756 GAGGTCATCAGTGATGAGC 59 57225512 57225659 AACATAGTTTCCACCTGTGG 59 NA Mus musculus 50 Tcp11 ENSMUSG00000062859 ENSMUST00000042692,ENSMUST00000114836,ENSMUST00000043925 1 3 4 80 17 28206306 28206417 GAAGAGTTTCCTGAAACCC 57 28206244 28206262 AAGGATGGTTAGCTGACTC 58 NA Mus musculus 50 Krt73 ENSMUSG00000063661 ENSMUST00000063292 2 1 1 93 15 101629836 101630340 CTTAAGAAGGATGTGGATGC 58 101629762 101629783 GACACTTGAGGAATTTGATCTC 59 NA Mus musculus 50 Xab1 ENSMUSG00000064037 ENSMUST00000076949 1 1 1 80 5 31801663 31803233 CCAGAACACATTCAGATATGTC 58 31803274 31803292 ATGATTGTCCCTGAAGCTG 59 NA Mus musculus 50 Trim38 ENSMUSG00000064140 ENSMUST00000074067 2 1 1 93 13 23880298 23881209 GAAATTGCTACAGGACGTG 58 23881365 23881384 TTTAGTGTGAACCTTCAGGG 59 NA Mus musculus 50 Sepp1 ENSMUSG00000064373 ENSMUST00000082424 1 1 1 80 15 3227209 3227227 CCATATGTTGAAGAAGCCA 57 3227271 3229116 TTCATCTTCAAGACTCGTG 57 NA Mus musculus 50 mmu-mir-30d ENSMUSG00000065437 ENSMUST00000083503 3 1 1 62 15 68172830 68172849 GTCTGTGTCTGTAAACATCC 58 68172787 68172805 CATCTGACTGAAAGCTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-215 ENSMUSG00000065562 ENSMUST00000083628 3 1 1 65 1 187137495 187137513 TATGATTTGACAGACCGTG 57 187137540 187137560 GTGACATACAGAATATTGGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:3588187 ENSMUSG00000067341 ENSMUST00000050325 2 1 1 157 17 34472821 34475761 AATCTGAGAGCAGGATCAG 58 34475881 34475900 GTAGTCTTGGAGAAAGTGTG 57 NA InUTR Mus musculus 50 Tspan6 ENSMUSG00000067377 ENSMUST00000087557 3 1 1 81 X 130430061 130431231 CAGACATGAGATTAAGAACAGC 59 130430001 130430021 ACTTCTATAGTCTCCTGTGGA 59 NA Mus musculus 50 Lyzs ENSMUSG00000069516 ENSMUST00000092163 3 1 1 197 10 116715773 116717710 GATCAATTGCAGTGCTCTG 59 116715139 116715157 AAAGAGACCGAATGAGCTG 59 NA InUTR Mus musculus 50 Sat2 ENSMUSG00000069835 ENSMUST00000092969,ENSMUST00000108656 2 2 2 81 11 69436031 69436213 AAGATCAGTGAAGAAGCTCTG 59 69436256 69436274 CTGGGATAATCTCTGCCAC 59 NA Mus musculus 50 OTTMUSG00000010207 ENSMUSG00000070616 ENSMUST00000094521 2 1 1 62 4 143129874 143130369 GAAAGAGGAAGCTTCAAGTG 58 143130394 143130412 CTGAAACATCCCAGAAGTG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Ren1 ENSMUSG00000070645 ENSMUST00000112288,ENSMUST00000094556 1 2 3 80 1 135250788 135250806 CGTATTCACAAAGAGGCCT 59 135250849 135251392 CCGTAGTACTGGGTATTCAG 58 NA Mus musculus 50 2810008M24Rik ENSMUSG00000071180 ENSMUST00000095458 2 1 1 82 13 108836745 108837637 TCACTACTCTAACATAAGCTGC 59 108837680 108837698 CCCACTCCACAACATACTC 59 NA InUTR Mus musculus 50 Egr4 ENSMUSG00000071341 ENSMUST00000095759 1 1 1 129 6 85462871 85462889 TAACAGACTCCTGCTTCCT 59 85462760 85462778 GACATGAGGTTGAAGAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rhox3 ENSMUSG00000071772 ENSMUST00000115198,ENSMUST00000096459 2 2 2 60 X 34964194 34965360 GCCATAGTGAAGAGATGGT 58 34965383 34965402 ATAGCCTCTTATACCACCTG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Mrpl27 ENSMUSG00000071867 ENSMUST00000096579 1 1 1 60 18 15169918 15169936 AAATGGAAGGTCACTACGT 58 15169960 15169978 CATCTAAACTGACGCTGAG 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000072589 ENSMUSG00000072589 ENSMUST00000100671 2 1 1 60 14 47718218 47718236 GACATCAGAAGCATCTCCA 59 47718176 47718194 TTTATCCCAGATGACCGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000072686 ENSMUSG00000072686 ENSMUST00000100826 1 1 1 60 14 25732846 25732866 AGGTGAAATGGATACTTCTGG 59 25732888 25732906 TTTCAGGAACCCAATCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG665055 ENSMUSG00000072856 ENSMUST00000101096 3 1 1 253 5 76734180 76734198 AAGTTAGACTTCTCCAGCC 58 76734415 76734433 AGTGTAAACTAGGGTCCTG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 2610030H06Rik ENSMUSG00000073131 ENSMUST00000114577,ENSMUST00000114578,ENSMUST00000114576,ENSMUST00000114575 2 4 5 68 X 69065508 69066153 TATTTGAAGGTGCCCTTGG 59 69066185 69066203 CAACAACAGCAACAATTGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 5730507C01Rik ENSMUSG00000073197 ENSMUST00000063216 2 1 1 60 12 18538492 18538512 GTCTCTACAAAGATGTGATGC 58 18538533 18538750 CAAGTGTAGCCTATAACAGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Csnk1g3 ENSMUSG00000073563 ENSMUST00000069597 3 1 1 81 18 54066260 54066278 ATGAAATCCAGAGCACCAC 59 54066320 54076646 AAACTTGAGGTATACCATCTCC 59 NA Mus musculus 50 Olfr632 ENSMUSG00000073938 ENSMUST00000098189 1 1 1 60 7 111086491 111086509 ACAGACTCTATGGACTGTG 57 111086533 111086551 AGGATGAAGAGGACATCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 B3gnt6 ENSMUSG00000074004 ENSMUST00000098278 3 1 1 74 7 105342237 105342255 GCTTATCCTTGGATCCCTG 59 105342181 105342199 TGAGCAGCATCTCATAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp94 ENSMUSG00000074282 ENSMUST00000032673 2 1 4 154 7 25094206 25097408 CTTTGTTGGAGATGGTGAC 58 25088873 25088892 CTCCTCAGGATTCTTGTCTC 59 NA InUTR Mus musculus 50 Etohi1 ENSMUSG00000074521 ENSMUST00000108936 3 1 3 158 2 177639099 177639325 GGAATCTCACAGCTATAGGT 58 177640599 177640867 GGAGGTCACTCTGATATGC 59 NA Mus musculus 50 ENSMUSG00000074642 ENSMUSG00000074642 ENSMUST00000099155 2 1 1 277 13 115880030 115880266 ACTAAATTGAAGCTCGGGA 58 115880507 115880525 GACGTTTATCTAGGGCGAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zcchc3 ENSMUSG00000074682 ENSMUST00000099207 2 1 1 73 2 152239845 152239863 AAAGCTAGCCCTGTTTCTC 59 152239790 152239808 AAACCACAAAGTTCTCCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Arrdc3 ENSMUSG00000074794 ENSMUST00000099356 2 1 1 89 13 81028485 81029362 TCCTTCATTACTGTCACCC 58 81029414 81029433 TTGGCACTTAAGGATATGGG 59 NA Mus musculus 50 1700041B20Rik ENSMUSG00000074825 ENSMUST00000099409 1 1 2 271 2 126967462 126967727 GGATACATCCAGTGACCAG 59 126967209 126967227 ATAAACATAGTGCCCTGGG 59 NA DesignNoJunction, InUTR Mus musculus 50 6720457D02Rik ENSMUSG00000074865 ENSMUST00000082203 3 1 1 84 13 62620081 62621540 ACACAGAAGGTGTGAAAGG 59 62620015 62620034 GTGAGCAGATAAAGCAAAGG 59 NA Mus musculus 50 Olfr1057 ENSMUSG00000075187 ENSMUST00000099892 2 1 1 82 2 86214690 86214710 CCCTGTCATCTATAGCTTGAG 59 86214628 86214646 GATTGAATCGTTTGCATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 4930588K23Rik ENSMUSG00000075335 ENSMUST00000100090 3 1 1 60 16 18609596 18609616 AGCTATAAAGAACAGAGGTCC 58 18609638 18609656 CCCTCTTGCTATTTCTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075554 ENSMUSG00000075554 ENSMUST00000100454 2 1 1 60 2 4012854 4012872 CTGTCCTTTACCACTGCTC 59 4012896 4012914 GATTCATGAGCTCATGTCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-695 ENSMUSG00000076216 ENSMUST00000102261 1 1 1 60 2 155182554 155182573 CACGAGGAATCCTAGATTGG 59 155182596 155182614 CCTTTGTAAGAAAGGCAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2700094K13Rik ENSMUSG00000076437 ENSMUST00000102647,ENSMUST00000102646 3 2 2 209 2 84510540 84510650 ATTGAGCATTGTACGAGCT 59 84510221 84510240 AAATTTGAGCTTTCGTGGAG 59 NA DesignNoJunction Mus musculus 50 IGKV4-92 ENSMUSG00000076531 ENSMUST00000103332 2 1 1 69 6 68705330 68705554 CTAATCTGTGTCACAGTGTC 57 68705280 68705300 GAGATGCAGTTATGGATACTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV8-24 ENSMUSG00000076583 ENSMUST00000103384 3 1 1 66 6 70167028 70167046 CTATTTGGCCTGGTACCAG 59 70166980 70167000 AGTGGATGCAAAGTATACCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-34 ENSMUSG00000076703 ENSMUST00000103512 2 1 1 60 12 116089509 116089527 TGGTAATGGCTACAACCAG 59 116089467 116089485 GGAGGACTTGTCTACAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S4 ENSMUSG00000076714 ENSMUST00000103523 3 1 1 104 12 116396819 116396837 CTTCTGGCTACACCTTCAC 59 116396733 116396752 TAGTACCACCATTGCTAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rps12 ENSMUSG00000078087 ENSMUST00000080355 1 1 1 60 7 63269712 63269730 AGTGGTTAAGGACTATGGC 58 63269752 63269772 CTTGAAGTATTCCTCGATGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000022845 ENSMUSG00000078117 ENSMUST00000104915 2 1 1 60 9 8972297 8972315 GATGGTTATGGTGGAGGTG 59 8972336 8972357 GATGCCTAAAGTAATGCTTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001079012.1 ENSMUSG00000078217 ENSMUST00000105015 2 1 1 60 X 3908469 3908490 CCTCACCTTTGAATATAACGAG 58 3908510 3908529 GGTTAGTGCATCACTATCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2AW66_MOUSE ENSMUSG00000078864 ENSMUST00000108942 1 1 1 80 2 177502808 177502827 GCATCCTTCTCAGAAGAGTC 59 177502867 177503093 TCCCAAATGTAACCTATAGCTG 59 NA Nonspecific Mus musculus 50 A2AP58_MOUSE ENSMUSG00000079118 ENSMUST00000110756 2 1 1 81 2 119888516 119889347 GATATACAGGCTTCCTGGTC 59 119888454 119888472 TAAGAGTGATTTCGGCGTC 59 NA Mus musculus 50 Olfr55 ENSMUSG00000079309 ENSMUST00000112168 1 1 1 97 17 33313852 33313870 CAACCTCACATTCTGTGGA 59 33313931 33313949 CCACCTCCAGTACATTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000068790 ENSMUSG00000079369 ENSMUST00000112738,ENSMUST00000112737,ENSMUST00000112735 2 3 3 62 14 6731667 6731685 TTGGTTCCATGCAGTACTC 59 6730948 6731641 CCTCCTTAATGCTGTAGGA 58 NA Nonspecific, DesignRelaxed Mus musculus 50 OTTMUSG00000017155 ENSMUSG00000079631 ENSMUST00000115171,ENSMUST00000115172 1 2 2 134 X 34996581 34996599 ACCATAGATTCACCCAGTG 58 34998568 34999777 GAAACCATCTCTTCACTATGG 58 NA Nonspecific Mus musculus 50 Rpl39 ENSMUSG00000079641 ENSMUST00000115231 2 1 1 60 X 34624004 34624022 CTATTCCTCAGTGGATCCG 58 34622727 34623982 CTTCTCTTAGAGTTGTACCTG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Tcfe3 ENSMUSG00000000134 ENSMUST00000115679,ENSMUST00000077680,ENSMUST00000079542,ENSMUST00000115678,ENSMUST00000115680,ENSMUST00000115677,ENSMUST00000101695 3 7 7 82 X 7343973 7344574 GTACTCAAGGTTCAGACCC 59 7344620 7344638 AAGTACTGTTTGACCTGCT 58 NA Mus musculus 50 Scpep1 ENSMUSG00000000278 ENSMUST00000000287 1 1 2 80 11 88805178 88805699 AAGAATTCCAGACGGTTCC 59 88805116 88805135 AAAGTTCTACACTGATGCCA 59 NA Mus musculus 50 Snapin ENSMUSG00000001018 ENSMUST00000001044 3 1 2 81 3 90294188 90294482 AACCTAGCTACAGAACTGTG 59 90294126 90294147 TAAGCAGCTTCTTAACATAGGG 59 NA Nonspecific Mus musculus 50 Rac1 ENSMUSG00000001847 ENSMUST00000080537 2 1 2 157 5 144278033 144278051 TTTCCTGGAGAGTACATCC 57 144269013 144275542 ATTAAGAACACGTCTGTCTG 57 NA Mus musculus 50 Ltbp1 ENSMUSG00000001870 ENSMUST00000001927,ENSMUST00000112516,ENSMUST00000112514 2 3 5 100 17 75626567 75648237 ACCATTGGATCACAGTGTG 59 75648300 75648319 TTCTGGCATTTGTTAAAGCC 59 NA Mus musculus 50 Kcnh6 ENSMUSG00000001901 ENSMUST00000106903,ENSMUST00000001965 2 2 3 80 11 105888984 105889004 TTCCTGAAACTTCAGTGACTC 59 105889046 105895109 CATAGCTTAGGGTCTGTGC 59 NA Mus musculus 50 Ltbp2 ENSMUSG00000002020 ENSMUST00000002073 2 1 2 80 12 86145350 86145369 ATGGATACAGATGTGTCTGC 59 86144848 86145309 TCATACACTCGTTGTCATCAG 59 NA Mus musculus 50 Hmgn2 ENSMUSG00000003038 ENSMUST00000102553,ENSMUST00000105893,ENSMUST00000102552 1 3 5 122 4 133522385 133522689 TTGTCTGCTAAACCTGCTC 59 133521899 133521917 ATTATTCGCATCCTTCCCG 59 NA Nonspecific Mus musculus 50 Bicd1 ENSMUSG00000003452 ENSMUST00000086829,ENSMUST00000111517,ENSMUST00000111513,ENSMUST00000003544 1 4 4 80 6 149432708 149443090 AACTGAAAGAGAACAACGAG 58 149443131 149443151 CCTCCCGGAATTTATATTCTC 57 NA Mus musculus 50 Homer3 ENSMUSG00000003573 ENSMUST00000110124,ENSMUST00000110123 3 2 4 153 8 72815037 72815055 CAGAGGCTGAACTCTTGAG 59 72815325 72815432 TTCAAAGTCTGGATCTCCTG 59 NA Mus musculus 50 Kpna6 ENSMUSG00000003731 ENSMUST00000102590,ENSMUST00000003828 1 2 2 80 4 129327979 129327997 TCCGTACAAGGAAAGAAGC 59 129326610 129327936 ATACCAGGTACCTGATTTGC 59 NA Mus musculus 50 Ikbkg ENSMUSG00000004221 ENSMUST00000114128,ENSMUST00000004330,ENSMUST00000114130,ENSMUST00000114127 2 4 7 150 X 71679336 71682503 CTGAAGAAATGCCAACAGC 59 71682617 71684259 TAACTGCTCGAATCCTTCC 59 NA Mus musculus 50 Matk ENSMUSG00000004933 ENSMUST00000105328,ENSMUST00000105330,ENSMUST00000092281 3 3 3 116 10 80724433 80724451 GTACATTGTCATGGAGCAC 58 80724610 80724720 CCTTCAGCAACATGAAGAG 58 NA Mus musculus 50 Sh2b2 ENSMUSG00000005057 ENSMUST00000005188 2 1 1 63 5 136703240 136703258 GGACAACACATTTGTGCTC 59 136701124 136701142 TGAGTCTATCGTTTCCAGG 58 NA DesignNoJunction Mus musculus 50 Mlxipl ENSMUSG00000005373 ENSMUST00000005507,ENSMUST00000111201 2 2 2 80 5 135599713 135599817 CAGAAGATGCTTATGTTGGC 59 135599860 135599878 CCATGAAGTCATCTAGGCT 58 NA Mus musculus 50 Mlxipl ENSMUSG00000005373 ENSMUST00000005507,ENSMUST00000111201 3 2 2 80 5 135599713 135599817 CAGAAGATGCTTATGTTGGC 59 135599859 135599878 CCATGAAGTCATCTAGGCTG 59 NA Mus musculus 50 Fcer2a ENSMUSG00000005540 ENSMUST00000005678,ENSMUST00000111036,ENSMUST00000044741,ENSMUST00000111034 3 4 5 108 8 3688344 3688546 ATGAAAGCTCAGGACTCTC 58 3688147 3688165 GGAGTCTGTTCAGGTTCTG 59 NA Mus musculus 50 Pcdha1 ENSMUSG00000007440 ENSMUST00000070797 1 1 9 175 18 37092293 37092312 CCACGCAGAAGTAAATTCAG 59 37318983 37319001 TTGCACTGGATACTGTTGG 59 NA DesignNoJunction Mus musculus 50 Arid1a ENSMUSG00000007880 ENSMUST00000105897,ENSMUST00000105896 3 2 3 92 4 133242399 133242417 AAATCTCATGCCTTCCACC 59 133242232 133242343 GAATCATGTTGTTGCTGCT 59 NA Mus musculus 50 Tle1 ENSMUSG00000008305 ENSMUST00000107355 1 1 10 87 4 71783467 71783486 CATTTCTAATGATGGCACCA 58 71779139 71783418 ATAAGACTTGTTGCCTTCTC 57 NA Mus musculus 50 Elavl2 ENSMUSG00000008489 ENSMUST00000107120,ENSMUST00000107111,ENSMUST00000107109,ENSMUST00000107118,ENSMUST00000084426,ENSMUST00000107110,ENSMUST00000107116,ENSMUST00000102799,ENSMUST00000078179,ENSMUST00000008633,ENSMUST00000107124,ENSMUST00000107114,ENSMUST00000107113 1 13 13 121 4 90930777 90930795 AAACTTATACGTCAGCGGG 59 90927669 90930692 TTGATATGCCAGTGACCTG 59 NA Mus musculus 50 Nf2 ENSMUSG00000009073 ENSMUST00000109910,ENSMUST00000056290,ENSMUST00000053079,ENSMUST00000093374,ENSMUST00000109908 1 5 6 91 11 4699928 4699946 TCTATGACCCTGAGAACAG 57 4694912 4699874 AATAGTAAACTCCTTGTCGC 57 NA Mus musculus 50 Tctex1d2 ENSMUSG00000014075 ENSMUST00000014220,ENSMUST00000080316 3 2 2 106 16 32422980 32422999 CAGATGAAATGCCTCAACTC 58 32426972 32426990 GAGTGTAGTTGTCCGTGTC 59 NA DesignNoJunction Mus musculus 50 Nat9 ENSMUSG00000015542 ENSMUST00000103041,ENSMUST00000103039,ENSMUST00000103038,ENSMUST00000103040 2 4 4 160 11 115045933 115046331 AGATGAAGACAAGTGCACC 59 115044993 115045809 TAGGCTCTGCAATCATGAC 59 NA Mus musculus 50 Mtif3 ENSMUSG00000016510 ENSMUST00000066675,ENSMUST00000016654,ENSMUST00000110566,ENSMUST00000110564 2 4 4 81 5 147768408 147768429 GAAGAAATACCACGTTCAAGTC 59 147767377 147768369 GTTAAATATCTCCTCCGTTTCC 58 NA Mus musculus 50 Rbpjl ENSMUSG00000017007 ENSMUST00000017151 3 1 2 161 2 164239765 164239873 AGAAACCATGTACAGGAGC 59 164239997 164240016 GTGTAGGTGAAAGAGAAGGG 59 NA Mus musculus 50 Ccdc70 ENSMUSG00000017049 ENSMUST00000070649,ENSMUST00000017193,ENSMUST00000110740 3 3 3 63 8 23084121 23084139 TTGTGGGTAGAGGAAAGAG 58 23084166 23084184 GGGACTTCTTATCTTCCCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Nt5c3l ENSMUSG00000017176 ENSMUST00000107398,ENSMUST00000107399,ENSMUST00000092688,ENSMUST00000092689,ENSMUST00000107397 2 5 6 88 11 100292584 100294242 TCAGTGAGGATGGATTCCT 59 100292514 100292532 GTAGCTGGAGTTCTCACAC 59 NA Mus musculus 50 Cd40 ENSMUSG00000017652 ENSMUST00000017799,ENSMUST00000073707,ENSMUST00000109305 3 3 4 96 2 164888980 164888998 CTGATACCGTCTGTCATCC 59 164889056 164892017 TTCTTATCCTCACAGCTTGTC 59 NA Mus musculus 50 Slc12a5 ENSMUSG00000017740 ENSMUST00000017884,ENSMUST00000099092,ENSMUST00000109311 2 3 3 128 2 164801947 164801967 TACATGATTTCCAGGTCTCTG 59 164802057 164804790 GAAGAGATAAGCCAGCAGG 59 NA InUTR Mus musculus 50 Glrx2 ENSMUSG00000018196 ENSMUST00000075224,ENSMUST00000111957,ENSMUST00000050491,ENSMUST00000079018 1 4 4 80 1 145592289 145592308 TGGATATGCTGGAATATGGC 59 145592351 145593653 CAAATATCCTGGGAACGGT 59 NA Mus musculus 50 Rai12 ENSMUSG00000018565 ENSMUST00000108595,ENSMUST00000108594,ENSMUST00000018709 3 3 3 81 11 69788587 69788605 CACATTCCCTGTGTTACAC 58 69784227 69788544 CTACTAGGGAGTTATCACCTG 58 NA Mus musculus 50 Sema6a ENSMUSG00000019647 ENSMUST00000115449 3 1 4 103 18 47442963 47442981 TCCTGAGAACAATGGTCAG 58 47441463 47441559 AACATTCATCTCCTCCAGG 58 NA Mus musculus 50 Gamt ENSMUSG00000020150 ENSMUST00000105363,ENSMUST00000020359 2 2 2 82 10 79722566 79722584 CACTGGATTATTGAGTGCA 57 79722399 79722520 AAGGGAACAACCTTATGTG 57 NA Mus musculus 50 Rab36 ENSMUSG00000020175 ENSMUST00000105422,ENSMUST00000020391 2 2 2 80 10 74514722 74514741 CTTCAGGACCTAGAGAAGAG 58 74514781 74515229 GGGTACCTCTATTCGTATTAGG 58 NA Mus musculus 50 Acaca ENSMUSG00000020532 ENSMUST00000103201,ENSMUST00000020843 1 2 2 103 11 84093919 84093937 CCTATGAACTCAACAGCGT 59 84094004 84103799 GATGTTCCCTCTGTTTGGA 59 NA Mus musculus 50 Lig3 ENSMUSG00000020697 ENSMUST00000021039,ENSMUST00000092849,ENSMUST00000108174,ENSMUST00000080461 1 4 4 80 11 82610937 82611280 TGAAGATCAGCAAGGATCC 59 82611324 82611342 CTGGGACGATAAAGTCAGG 59 NA Mus musculus 50 Exoc7 ENSMUSG00000020792 ENSMUST00000021147,ENSMUST00000106413,ENSMUST00000106411,ENSMUST00000106409,ENSMUST00000106408 3 5 6 99 11 116166357 116167714 CACTAGGAACATGGTGTCC 59 116166276 116166294 CTGTAGGTTCTCTGTCTGC 59 NA Mus musculus 50 0610010K14Rik ENSMUSG00000020831 ENSMUST00000108579,ENSMUST00000108575,ENSMUST00000081826,ENSMUST00000102569,ENSMUST00000108577 3 5 9 81 11 70049696 70051033 GGGCTCAGATAAAGACCAC 59 70049633 70049651 CCTTTCTTGGGTGACTCAG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 2310004I24Rik ENSMUSG00000020910 ENSMUST00000072719 2 1 3 151 11 66855017 66855035 TATGAAGATGCTGAGGGAG 58 66853827 66854905 CTCAGAAAGTCCTTAATCATCC 58 NA InUTR Mus musculus 50 Acly ENSMUSG00000020917 ENSMUST00000107389,ENSMUST00000007131,ENSMUST00000107385 2 3 5 84 11 100380474 100380938 ACAAGAAAGAAGTCCTGGC 59 100380408 100380426 GGGTTGATCTCAAGGTAGG 59 NA Mus musculus 50 Tc2n ENSMUSG00000021187 ENSMUST00000095460,ENSMUST00000110047 1 2 2 80 12 102928052 102931334 ATTCATCCAGAGACATGACTC 59 102927992 102928010 CTTCTGTTACTGCCCTGAG 59 NA Mus musculus 50 Zc3h13 ENSMUSG00000022000 ENSMUST00000022577 1 1 2 80 14 75692083 75693705 CAATTACAGAAGGTCACCAG 58 75693748 75693766 TCAGAATCCACATCCTGAC 58 NA Mus musculus 50 Shank3 ENSMUSG00000022623 ENSMUST00000109309,ENSMUST00000039074 3 2 3 145 15 89362837 89362855 CATGAAGGTTGTGTCTGTG 58 89363876 89368454 GAATGGAAGCAAGTTCCTC 58 NA Mus musculus 50 Aifm3 ENSMUSG00000022763 ENSMUST00000115685,ENSMUST00000100128,ENSMUST00000023448 3 3 3 80 16 17500426 17500445 TGCTTCAACATTAGTACTGG 57 17500488 17500597 CTTCTCAATCTTCACCTGG 57 NA Mus musculus 50 Stxbp5l ENSMUSG00000022829 ENSMUST00000114782,ENSMUST00000114780,ENSMUST00000114790,ENSMUST00000023526,ENSMUST00000114778 2 5 10 81 16 37188700 37188720 ATAGATCAAGTGACCTGTACC 58 37174433 37188657 TTCAGCTCTGTTAAGCCTG 59 NA Mus musculus 50 Il15ra ENSMUSG00000023206 ENSMUST00000091456,ENSMUST00000065131,ENSMUST00000078834 3 3 7 118 2 11645130 11645148 CTTCTGCAGGAACTACAGG 59 11645227 11645733 GGGAGAAATCTCTGTTATCCTG 59 NA Mus musculus 50 Epb4.2 ENSMUSG00000023216 ENSMUST00000102490,ENSMUST00000023987 1 2 2 80 2 120855749 120855767 GAACGGCTTTATCTACCTG 57 120854876 120855706 ATGACGTCTTTCTCAAACTG 58 NA Mus musculus 50 Calcr ENSMUSG00000023964 ENSMUST00000075644 1 1 2 95 6 3657556 3657575 CATATGTGGACAATGCAGTG 59 3650272 3657499 GCAACTTATCACTTCACTGG 58 NA Mus musculus 50 Foxp4 ENSMUSG00000023991 ENSMUST00000113265,ENSMUST00000024790,ENSMUST00000097311,ENSMUST00000113262 2 4 4 84 17 48014933 48014951 CCCTCTTTATGGACATGGG 59 48014168 48014888 GTTGAGGTGTTTGATAAACTGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Wiz ENSMUSG00000024050 ENSMUST00000064694,ENSMUST00000087703 2 2 6 81 17 32524571 32524589 CATCTTCTCATTACCTGCC 57 32505083 32524526 AAGTTAGCCACAGAAATGC 58 NA Mus musculus 50 MGI:2137414 ENSMUSG00000024301 ENSMUST00000078961 3 1 2 82 17 27057991 27058009 GACCAAAGTTGACACATCC 58 27058055 27058760 CTTTCTGAGCTGCATTGTG 59 NA Nonspecific Mus musculus 50 Galr1 ENSMUSG00000024553 ENSMUST00000065224 3 1 1 143 18 82574904 82574922 GTACCTTCTGCCCTTACTG 59 82563368 82563387 AATACTACAACGACCACCAG 59 NA DesignNoJunction Mus musculus 50 Atp9b ENSMUSG00000024566 ENSMUST00000114697 2 1 3 113 18 81041266 81041284 AGCACTATTGTTGCATCAG 58 80932005 81033094 AGTACTAGTGCAACCTACC 57 NA Mus musculus 50 Tm7sf2 ENSMUSG00000024799 ENSMUST00000025713,ENSMUST00000113544,ENSMUST00000113543 2 3 3 80 19 6063982 6064088 CTGGTATGAGGAGTCTGTC 58 6063920 6063938 GCTAGATCTCCAAAGACCA 58 NA Mus musculus 50 Aspscr1 ENSMUSG00000025142 ENSMUST00000026135,ENSMUST00000106159,ENSMUST00000106158 2 3 5 182 11 120534483 120535371 AGGTACTAGAAGACACATGC 58 120538931 120539743 CGATGCGAACTATGTTCTC 58 NA Mus musculus 50 Slc16a3 ENSMUSG00000025161 ENSMUST00000070653,ENSMUST00000100130 3 2 2 188 11 120815573 120816548 TCAGTTCTTGGTGAAAGCA 59 120816700 120816718 AACTCATGCATAAGCTCCT 58 NA InUTR Mus musculus 50 Prdx4 ENSMUSG00000025289 ENSMUST00000026328,ENSMUST00000038776 3 2 3 95 X 151772734 151772752 AATGAGTGCCACTTCTACG 59 151772657 151772675 CTTGGCTTTGCTTAGATGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Jarid1c ENSMUSG00000025332 ENSMUST00000112588 2 1 3 135 X 148672241 148674574 GAATGAGCTGGAGATTGTG 58 148674673 148674691 TTCATAGTGAGAGCGTAGC 58 NA Mus musculus 50 St8sia5 ENSMUSG00000025425 ENSMUST00000075290 3 1 2 194 18 77424891 77424909 TTTATCTTCATCTGCGCCT 59 77450497 77471544 AAACTCGAAGTACCTGGAG 58 NA Mus musculus 50 Rps6ka6 ENSMUSG00000025665 ENSMUST00000096348,ENSMUST00000065976,ENSMUST00000082034,ENSMUST00000113428,ENSMUST00000113427 3 5 6 83 X 108518444 108521079 CTTCATTCTCAAGGAGTCGT 59 108518380 108518398 GATTGAATCTGGATGGGCT 59 NA Mus musculus 50 Uimc1 ENSMUSG00000025878 ENSMUST00000026997,ENSMUST00000058181 3 2 3 80 13 55177761 55178774 AAAGCCTGAATAGTTGCTG 58 55177699 55177719 GGGAATGTGAAGATAGTTCAG 58 NA Mus musculus 50 Plcd4 ENSMUSG00000026173 ENSMUST00000067916,ENSMUST00000113750 2 2 7 120 1 74611744 74611870 GTATGAAACAAGAGATGGCAC 59 74612331 74612349 GATTGTTCTTCAAGGCCCT 59 NA Mus musculus 50 Trip12 ENSMUSG00000026219 ENSMUST00000027421,ENSMUST00000086987 3 2 2 81 1 84722018 84722037 TTTGATAATGAGCAGCAGAG 57 84721375 84721975 TTAAACTCCGAAATCCTCCA 58 NA Mus musculus 50 Dbi ENSMUSG00000026385 ENSMUST00000027634,ENSMUST00000094616 2 2 2 193 1 122016572 122017339 GGCTGAATTTGACAAAGCC 59 122010099 122012969 CCTTGGAAGTCCCTTTCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Spata17 ENSMUSG00000026611 ENSMUST00000110950,ENSMUST00000027908 1 2 4 83 1 188921711 188921730 AGTGCGTATAATTCTGACTC 57 188872360 188921665 CTGGAAATCCTTGTCAGAG 57 NA Mus musculus 50 Tsc1 ENSMUSG00000026812 ENSMUST00000028155,ENSMUST00000113869,ENSMUST00000113870,ENSMUST00000113868 1 4 5 80 2 28531218 28531237 AGGAATCTACCTGATTTCCT 57 28531280 28531530 AGATATTGCAGCTTCTTCC 57 NA Mus musculus 50 Gapvd1 ENSMUSG00000026867 ENSMUST00000102800,ENSMUST00000113111,ENSMUST00000028224,ENSMUST00000113099,ENSMUST00000113109 1 5 7 80 2 34555417 34556291 TGCCTAAAGCTCCTATACC 58 34555355 34555373 TTGAGAATCTGTCAGGACC 58 NA Mus musculus 50 Tfpi ENSMUSG00000027082 ENSMUST00000111718,ENSMUST00000028487,ENSMUST00000090732,ENSMUST00000111714,ENSMUST00000111717,ENSMUST00000111712 2 6 8 87 2 84284291 84284910 CTGTGAGAATCCAGTCCAC 59 84284222 84284242 GCGATCAGTTACAGTATTTCC 58 NA Mus musculus 50 Fastkd1 ENSMUSG00000027086 ENSMUST00000073152,ENSMUST00000102706 2 2 2 86 2 69546627 69546645 GCATCTGTATTTCAGTCCA 57 69545755 69546577 GATAAGGCCCTTAAGTCCT 58 NA Mus musculus 50 2210009G21Rik ENSMUSG00000027281 ENSMUST00000110094 2 1 5 117 2 136772974 136825926 TTTGTCCTTAAGTGTGGGA 58 136826007 136830685 ACAGCAAACAAACTTCCTC 58 NA InUTR Mus musculus 50 Mtch2 ENSMUSG00000027282 ENSMUST00000062223 1 1 5 113 2 90687798 90687816 TTTCCTTTCCCTGATCCTG 58 90687893 90687911 GATATTTCGCTGAGGAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 5730494N06Rik ENSMUSG00000027341 ENSMUST00000110163,ENSMUST00000028816 1 2 3 60 2 132071692 132071711 ATGGCTACATTGACCTTCAG 59 132069837 132069855 GCAATGGCCTTATAAGGGA 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Nkain4 ENSMUSG00000027574 ENSMUST00000108873,ENSMUST00000103053,ENSMUST00000029091 3 3 5 127 2 180678877 180678895 TTTGACTTCCTGGGTTACC 59 180678513 180678786 GCCCATACAACATACACCA 59 NA InUTR Mus musculus 50 Notch2 ENSMUSG00000027878 ENSMUST00000107028 3 1 2 193 3 97935198 97935216 ATTGGAGGCTACACTTGTC 59 97938496 97941233 TTGTCTTTGAAGTGGTAGGT 58 NA Mus musculus 50 Ints3 ENSMUSG00000027933 ENSMUST00000029542,ENSMUST00000071488 1 2 2 80 3 90196179 90196197 AAGTCGAAAGAATGCTACC 57 90196011 90196136 TTTGTATCTTCTTCCTCCGA 58 NA Mus musculus 50 Rrh ENSMUSG00000028012 ENSMUST00000029648 3 1 3 98 3 129516259 129518487 AGGCTGTCAGATTTATGCA 58 129516179 129516197 CAACTGATGGTCAGGTACC 59 NA Mus musculus 50 Pear1 ENSMUSG00000028073 ENSMUST00000090981,ENSMUST00000029714,ENSMUST00000079083 2 3 4 84 3 87555860 87556042 TTACGTCATGCCAGATGTC 59 87555794 87555814 GTTAGGAGAACACTGAGACAG 59 NA Mus musculus 50 1810030N24Rik ENSMUSG00000028295 ENSMUST00000029972,ENSMUST00000108134,ENSMUST00000108131,ENSMUST00000108132,ENSMUST00000108133 2 5 5 83 4 34716385 34718514 TTAAACCCAACAAACCTGTG 58 34716321 34716339 GAGTTGCATGCAGATAACC 58 NA Mus musculus 50 Tmeff1 ENSMUSG00000028347 ENSMUST00000107703,ENSMUST00000030032 3 2 3 111 4 48671702 48671721 ATGTAGTACCAAGTAGGCAG 58 48671795 48674881 GGGCATTTCCTTGTTATGC 59 NA Mus musculus 50 Tnc ENSMUSG00000028364 ENSMUST00000030056,ENSMUST00000107372,ENSMUST00000070019,ENSMUST00000107379,ENSMUST00000107377,ENSMUST00000107375,ENSMUST00000107374 2 7 8 81 4 63668428 63668446 GATTGGTGTTTCTGCTGTC 59 63667527 63668384 CTTGGGTGCATCAATTTCTG 59 NA Mus musculus 50 4921539E11Rik ENSMUSG00000028520 ENSMUST00000030245 2 1 2 106 4 102904110 102908243 CTTCCATGAAACAATCCCA 57 102904022 102904041 TGTACATTTCATAGCGTAGG 57 NA Mus musculus 50 Pde4b ENSMUSG00000028525 ENSMUST00000106911,ENSMUST00000030251,ENSMUST00000106908,ENSMUST00000106904 1 4 9 107 4 102170382 102170400 AAGAAACAACTTCACCCTG 57 102178639 102243380 TATGATTCTTCTTGCAGGC 57 NA Mus musculus 50 Nfia ENSMUSG00000028565 ENSMUST00000097969,ENSMUST00000107062,ENSMUST00000075448,ENSMUST00000107061 3 4 7 109 4 97450295 97623073 CATGCAGCAGATTCAAGTC 59 97667098 97667116 GATGTGACAAAGCTGTCCT 59 NA Nonspecific Mus musculus 50 Podn ENSMUSG00000028600 ENSMUST00000044248,ENSMUST00000106709,ENSMUST00000106708 2 3 4 88 4 107690498 107691406 TTTCTCAGGTTCAACAAGCT 59 107690429 107690447 CCTTCAATGTCCAAGACCT 59 NA Mus musculus 50 Pomgnt1 ENSMUSG00000028700 ENSMUST00000106498,ENSMUST00000106496 1 2 5 125 4 115823836 115824430 GAGATTCTGTCAGACAGGG 59 115824519 115824537 TAGTCTTGCTCTGGTTCTG 58 NA Mus musculus 50 Pqlc2 ENSMUSG00000028744 ENSMUST00000105801,ENSMUST00000053862,ENSMUST00000094564 1 3 3 98 4 138856995 138857013 ACAAAGAAGGAGGTCATCG 59 138856315 138856933 CTGCCGTATGAAATTGGTG 59 NA Mus musculus 50 Kif17 ENSMUSG00000028758 ENSMUST00000105818,ENSMUST00000105821,ENSMUST00000105819 3 3 5 150 4 137849818 137849836 CTGGGATGAGGATAATGGC 59 137852172 137857178 GTGAGTTGTGATATGCATGTG 59 NA Mus musculus 50 Prkag2 ENSMUSG00000028944 ENSMUST00000076306 1 1 4 105 5 24453246 24453265 ACATACCATGCTCCTTTGAG 59 24394995 24414147 CTGAGTCTTCTGCTTCCTC 59 NA Mus musculus 50 Abcb8 ENSMUSG00000028973 ENSMUST00000115077,ENSMUST00000073076,ENSMUST00000035362 1 3 3 98 5 23912601 23912619 CATAGGTTTCATCAGCCAG 57 23913187 23913205 GTGTACACCTCTTCATCGG 59 NA DesignNoJunction Mus musculus 50 Masp2 ENSMUSG00000028979 ENSMUST00000105702,ENSMUST00000103219,ENSMUST00000052060,ENSMUST00000105701 2 4 4 91 4 147977202 147977220 CCTAAAGGTCACCTTCCAC 59 147977275 147977810 TGCATTCATCCACATCCTC 59 NA Mus musculus 50 Mll5 ENSMUSG00000029004 ENSMUST00000094962,ENSMUST00000056291,ENSMUST00000115128 3 3 4 80 5 23002301 23002320 GGAGTCCTACAGTTAATGGT 58 23002363 23002804 GTGGTGTGGTTAAATCTGG 58 NA Mus musculus 50 Trp73 ENSMUSG00000029026 ENSMUST00000105644,ENSMUST00000030892,ENSMUST00000105641,ENSMUST00000097763,ENSMUST00000097762,ENSMUST00000105642,ENSMUST00000105643 1 7 7 98 4 153441185 153441203 TGTAGAAGGCAACAACCTC 59 153438843 153441123 AATTCTGTTCCCACCTGTG 59 NA Mus musculus 50 Ttll10 ENSMUSG00000029074 ENSMUST00000105577,ENSMUST00000097731 1 2 4 98 4 155417290 155419446 GCTCTATTTGATGTTCATGC 57 155417211 155417230 TCATTGATGTATCGGTTGAG 57 NA Mus musculus 50 Eif2b4 ENSMUSG00000029145 ENSMUST00000077693,ENSMUST00000114603 2 2 2 80 5 31493007 31493026 TCAGGATTACACAACACCTC 59 31492826 31492964 GTCAGGAAGCTGATGTAGG 59 NA Nonspecific Mus musculus 50 Dpysl5 ENSMUSG00000029168 ENSMUST00000114729,ENSMUST00000088081 1 2 3 80 5 31085633 31086691 TAAGATGCAAGGGAAGGTG 59 31086735 31086753 TCCTGATGGTAGTAGTGCA 59 NA Mus musculus 50 Clock ENSMUSG00000029238 ENSMUST00000031148,ENSMUST00000113499,ENSMUST00000075159 2 3 4 81 5 76664870 76665314 GCAGTCAGTCCATAAACTC 57 76664807 76664826 GGAATTGGTAAATTTGCAGC 58 NA Mus musculus 50 Aff1 ENSMUSG00000029313 ENSMUST00000100975,ENSMUST00000054979,ENSMUST00000031256 1 3 4 81 5 104263467 104270081 AAGAAGAGAAAGGGTGACC 58 104270126 104270144 ATGAAGATGACGCAGTCTG 59 NA Mus musculus 50 Ankrd7 ENSMUSG00000029517 ENSMUST00000115396 3 1 2 81 6 18818089 18818252 TGATTAAGCAGGCAGTAGAG 59 18818295 18818314 TCTACCAGATTTGGATCTGC 59 NA Mus musculus 50 Limk1 ENSMUSG00000029674 ENSMUST00000015137,ENSMUST00000111233 1 2 3 92 5 135138027 135140067 CATCAAGAACATGGACAGC 58 135137709 135137727 TTCATCGAATGGAGGTAGG 58 NA Mus musculus 50 2700094F01Rik ENSMUSG00000029782 ENSMUST00000115157,ENSMUST00000115160,ENSMUST00000058831 3 3 4 81 6 30442719 30444752 AGCTACAAATAGGAGAGGC 58 30442656 30442675 GCATTCAGAGTTGGAATGAG 58 NA Mus musculus 50 Mad2l1 ENSMUSG00000029910 ENSMUST00000116605,ENSMUST00000079549,ENSMUST00000101343 1 3 3 83 6 66488988 66489006 TACAGGATGAAATTCGCTC 57 66489052 66489773 CAAAGGAACAAGAAACTTCC 57 NA Mus musculus 50 Ttc23 ENSMUSG00000030555 ENSMUST00000107471,ENSMUST00000032774,ENSMUST00000072071,ENSMUST00000107470 3 4 4 80 7 74814999 74815018 TGTGGGAACATTGTAAAGGA 59 74815060 74823795 CTGACCTTGATACAACTGTG 58 NA Mus musculus 50 Maz ENSMUSG00000030678 ENSMUST00000106323,ENSMUST00000032916 1 2 2 99 7 134168118 134168397 AATGTGAGAAATGTGAGGCA 59 134168038 134168056 ATCTTGCCACAGACATGAC 59 NA Mus musculus 50 Sh2b1 ENSMUSG00000030733 ENSMUST00000032978,ENSMUST00000098049 2 2 2 80 7 133615264 133615284 CTACTATTACTGATGTCCGCA 59 133614991 133615222 GGCCTTCTACCTTAACCAC 59 NA Mus musculus 50 Tacc2 ENSMUSG00000030852 ENSMUST00000098004 3 1 5 120 7 137873231 137873249 CCAGCTCACCTTCTAAGTC 59 137873332 137877028 AACGTGTCAGTCTTTAGTGG 59 NA Mus musculus 50 Otud5 ENSMUSG00000031154 ENSMUST00000115667 1 1 5 80 X 7444901 7444919 ATGGCAGAGATGTACAACC 59 7444961 7445065 GAATGTGTTGATAGGTTCCAC 58 NA Mus musculus 50 Tbc1d9 ENSMUSG00000031709 ENSMUST00000093393 2 1 2 81 8 85745448 85757389 AAATACAGGGCATCATTGC 58 85757433 85757452 ATGGCCTCTTTAAACTTCTC 57 NA Mus musculus 50 Pde4c ENSMUSG00000031842 ENSMUST00000110095,ENSMUST00000034307 1 2 2 90 8 73272407 73272813 ATGGTCATAGACATGGTGC 59 73272867 73272885 TCACTTTCTTCGTCTCCAC 59 NA Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113705,ENSMUST00000113695,ENSMUST00000034928,ENSMUST00000113690,ENSMUST00000113707,ENSMUST00000113693,ENSMUST00000113686,ENSMUST00000113685,ENSMUST00000113687,ENSMUST00000030185 3 10 16 120 9 66879313 66879767 GGCTGAGAAGTACTCTCAG 58 66878858 66878879 CTCCAATTTGGTTACTGATCTC 58 NA Mus musculus 50 Parp16 ENSMUSG00000032392 ENSMUST00000093828 3 1 2 186 9 65081477 65081495 CTTCTCTGTTTGGAGAGGG 59 65081645 65083659 ATAGTGAGACTCTGTCCCT 58 NA Mus musculus 50 2610101N10Rik ENSMUSG00000032407 ENSMUST00000078374 2 1 2 85 9 95396349 95402974 ATCTTCAGATGCACATCCTC 59 95396283 95396301 TACTTAGGGTTCGCTTTGC 59 NA Mus musculus 50 Mobp ENSMUSG00000032517 ENSMUST00000093773,ENSMUST00000111627 3 2 5 128 9 120077009 120077027 CTTCACCTTCCTCAACTCC 59 120077117 120082277 CTCCTCAATCTAGTCTTCTGG 59 NA Mus musculus 50 Ank2 ENSMUSG00000032826 ENSMUST00000090335 3 1 5 102 3 126732211 126732229 CTCACACCAATACATGTGG 58 126728531 126732146 TTGGCTGCATAATGTTAGTG 58 NA Mus musculus 50 Ogfod1 ENSMUSG00000033009 ENSMUST00000093301 2 1 2 61 8 96579192 96579210 CTTCCTGGAACAAACTGGT 59 96579234 96579952 AATTTCATGCTGGTGAAAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 6720456B07Rik ENSMUSG00000033940 ENSMUST00000035725 1 1 1 62 6 113565818 113565837 CCCTTGAACGGAGAATAGAG 59 113566068 113566086 TCTAGGTCAGAGTCTCACC 59 NA DesignNoJunction Mus musculus 50 Tesk2 ENSMUSG00000033985 ENSMUST00000106459,ENSMUST00000068353 2 2 5 81 4 116474344 116474362 ATGCTTTCCAGAACATGGT 59 116474405 116477457 AGATAGCCTCGAGAATTACAG 58 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111696,ENSMUST00000111695,ENSMUST00000111694,ENSMUST00000111678,ENSMUST00000111677,ENSMUST00000111676,ENSMUST00000111687,ENSMUST00000111685,ENSMUST00000111684,ENSMUST00000111672 3 10 23 72 2 84443386 84443404 GAAGAGTTGGATGTGTTGG 58 84443048 84443350 GCTAAATCTTCTGCATGGG 58 NA DesignRelaxed Mus musculus 50 Ttyh2 ENSMUSG00000034714 ENSMUST00000045779 1 1 2 134 11 114571383 114571401 CTGCTATGATGGCATTGAG 58 114571497 114572142 TCATCATAATCTCTGTCCCTG 58 NA Mus musculus 50 Dopey1 ENSMUSG00000034973 ENSMUST00000098498 1 1 3 80 9 86400061 86400080 TCGTCTGAGTTACAACTGAC 59 86400120 86401125 TTCAATATAGGTCTCCAAGGAG 58 NA Mus musculus 50 Mitf ENSMUSG00000035158 ENSMUST00000113342 2 1 7 109 6 97891282 97946372 ATGGAAGTCCTTAAGATGGA 57 97946444 97946462 GTATTTGCCATTTGCAAGG 57 NA Mus musculus 50 6330514A18Rik ENSMUSG00000035486 ENSMUST00000105351,ENSMUST00000039836 2 2 2 163 10 79823077 79823096 GCAAGATGACTTCTTCAGTC 58 79823308 79823445 TTGAGGTAAAGGGACAAGG 58 NA Mus musculus 50 Cd99l2 ENSMUSG00000035776 ENSMUST00000114586 3 1 4 116 X 68693775 68703794 CAGTAAAGCAACTAGATGGGT 59 68691354 68691372 CAAGATCCTTGTCTGACCA 58 NA Mus musculus 50 Alg12 ENSMUSG00000035845 ENSMUST00000088908 2 1 2 102 15 88641801 88641820 CTCTATACTCACTCCTCCCA 59 88637143 88641739 TTATTCAGGATATAGGTGCAGC 59 NA Mus musculus 50 Rbm43 ENSMUSG00000036249 ENSMUST00000102768,ENSMUST00000102767,ENSMUST00000039138 1 3 3 97 2 51782260 51782278 GCACAAGACTTCATCAGAC 58 51781435 51781454 GCCATCACATAGTTGAAGAC 58 NA DesignNoJunction Mus musculus 50 Arsi ENSMUSG00000036412 ENSMUST00000040359 2 1 1 60 18 61076736 61076755 CATATCACAGACTGGTACCC 59 61076778 61076796 CAGCTGCTGATGTAGTACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cnot1 ENSMUSG00000036550 ENSMUST00000068452,ENSMUST00000109467 2 2 3 81 8 98264726 98264839 GATTGGCAACTGAATTTGAG 57 98264664 98264682 TGGTAGGTTAAGACCACAG 58 NA Mus musculus 50 Micall2 ENSMUSG00000036718 ENSMUST00000110848,ENSMUST00000044642 2 2 2 104 5 140193468 140193486 CTGTCAGCAGTATCTGTGG 59 140192789 140193400 ACTGTTTACACCTGAAGCA 59 NA Mus musculus 50 Wdhd1 ENSMUSG00000037572 ENSMUST00000111792 1 1 4 92 14 47887809 47887830 CGGATATGTTATACTGATGTGG 58 47886729 47887757 TATAATGCCCTTATTGCTCG 57 NA Mus musculus 50 Ptger2 ENSMUSG00000037759 ENSMUST00000046891 3 1 1 62 14 45621589 45621607 GAGAACACAAGAAGCTCAG 58 45621633 45621651 TCAGTCTGTTTACTGGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Iqch ENSMUSG00000037801 ENSMUST00000042322 2 1 2 81 9 63328598 63330388 TGTTTCTCACTCAAGGTGG 59 63328535 63328555 TCTATCAGCATGTCTACTGTG 59 NA Mus musculus 50 Hoxa9 ENSMUSG00000038227 ENSMUST00000048680 3 1 2 67 6 52175700 52175718 ATGGCATTAAACCTGAACC 57 52175651 52175669 CAAAGTGTGAGTGTCAAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pigu ENSMUSG00000038383 ENSMUST00000099167 1 1 2 80 2 155118473 155118491 ATTTATGCAGGAAGTGCCA 59 155073320 155118431 TGTATTCTTGTACATCTGCCC 59 NA Mus musculus 50 Dock10 ENSMUSG00000038608 ENSMUST00000077946,ENSMUST00000097681,ENSMUST00000057520 2 3 3 80 1 80630825 80630846 GATATCCGAACACTCTATTCGA 59 80611941 80630785 TTTACAAGCCTCTTTCACCA 59 NA Mus musculus 50 AW146299 ENSMUSG00000038770 ENSMUST00000110672,ENSMUST00000116454,ENSMUST00000085681 3 3 5 117 5 145762087 145765812 GGAATATCGCTGGAGACTG 59 145758098 145758118 GAGATGTTCCGAAGAAATGTG 59 NA Mus musculus 50 Sema6c ENSMUSG00000038777 ENSMUST00000090821,ENSMUST00000090823,ENSMUST00000079897 3 3 5 81 3 94972564 94972583 TTACAGAAGTCTTGGACCTC 58 94972626 94972747 ATAGACAAAGTGTGGCTCTC 59 NA Mus musculus 50 Dido1 ENSMUSG00000038914 ENSMUST00000087517,ENSMUST00000103057,ENSMUST00000103056,ENSMUST00000103055,ENSMUST00000103054 3 5 5 103 2 180419878 180422195 AAGATATTCCAGCCTGTCG 59 180419793 180419814 CAGTCATTACTGCAATACACAG 59 NA Mus musculus 50 Wdr45 ENSMUSG00000039382 ENSMUST00000043045,ENSMUST00000116634,ENSMUST00000115689,ENSMUST00000115690,ENSMUST00000115687 1 5 8 80 X 7304141 7304160 TCTCTTTGATACCCAATCCA 58 7304202 7304304 AAGTTAATGCAGTACAGGGT 58 NA Mus musculus 50 4732454E20Rik ENSMUSG00000039508 ENSMUST00000048052 2 1 1 60 10 33761452 33761471 ACATATTCGTATCCCTTCGT 58 33761411 33761432 ACATAGAAGATTGGGTACAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 D330017J20Rik ENSMUSG00000039629 ENSMUST00000046028 1 1 2 81 6 29903446 29905442 GGACCATGATGTTAGTGGT 58 29905487 29905505 TAAAGTTGTAGCATGGCCT 58 NA Mus musculus 50 2410089E03Rik ENSMUSG00000039801 ENSMUST00000110617,ENSMUST00000044206 1 2 3 80 15 8212373 8212934 GTGAGAAAGATAGGTTGCAG 58 8212977 8212995 ACAGCAGTTCATTCATCAG 57 NA Mus musculus 50 Timeless ENSMUSG00000039994 ENSMUST00000105244,ENSMUST00000055539,ENSMUST00000105245,ENSMUST00000105241 3 4 8 95 10 127687157 127687349 TTCTTGCATGCAGAATGGA 59 127687408 127687426 TCTTCACTTTCGTCCTCTG 58 NA Mus musculus 50 Dgkz ENSMUSG00000040479 ENSMUST00000099709,ENSMUST00000028667,ENSMUST00000111304,ENSMUST00000111303 1 4 4 118 2 91778718 91778888 TTCATGAGTCTCGAGAAGC 59 91778501 91778519 CTTGGCTAAGTCCTTGGAG 59 NA Mus musculus 50 Camta2 ENSMUSG00000040712 ENSMUST00000108544,ENSMUST00000036299 2 2 5 80 11 70484230 70484402 TGCACTTAAGTTTGCACTC 58 70484168 70484186 TGTTCATAGTAGCTTCGGA 57 NA Mus musculus 50 S100pbp ENSMUSG00000040928 ENSMUST00000072431 3 1 4 119 4 128859333 128859462 CCTCAACTAATTTGTGATCCTG 59 128859235 128859254 ACTCTCATTAGGTTGAGGGT 59 NA Mus musculus 50 Arhgef10l ENSMUSG00000040964 ENSMUST00000069623,ENSMUST00000105800,ENSMUST00000105799,ENSMUST00000105798 3 4 7 157 4 140124681 140126185 AACATCAACTTCAAGCCCT 59 140124307 140124326 AGATTGTCTTTGTCGTAGGT 58 NA Mus musculus 50 Dmtf1 ENSMUSG00000042508 ENSMUST00000095017,ENSMUST00000115353 3 2 5 82 5 9124519 9127967 TTCATTTCCTGCTTCAACAG 58 9124456 9124475 ATGTTTGTAGTGTTCCACTG 58 NA Mus musculus 50 Mobkl1b ENSMUSG00000043131 ENSMUST00000055261,ENSMUST00000101245 2 2 3 80 6 83284192 83288281 CTTCTAAGATTGGTGTCCC 57 83288325 83288343 CATAAACCCTGAAGAGACG 57 NA Mus musculus 50 Adamtsl5 ENSMUSG00000043822 ENSMUST00000105352 1 1 2 279 10 79811118 79811136 AAACTTGGACGTATTGCCT 59 79808274 79808292 AAATCACAGCTCAGGAGAG 58 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Acp1 ENSMUSG00000044573 ENSMUST00000074038 2 1 2 61 12 31589966 31589984 GCAGAAGCAGTATTCAGGA 59 31589686 31589941 TCAATGGCCCAATTATCTG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Zfp553 ENSMUSG00000045598 ENSMUST00000056232,ENSMUST00000106312 3 2 2 60 7 134378880 134378900 TCCAAGTAGGAAACACTTCTC 59 134378922 134378940 TCCCATAAATCATCCCAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Spred2 ENSMUSG00000045671 ENSMUST00000093299,ENSMUST00000055258 2 2 3 80 11 19901084 19905794 TGTAAGGCAGTGGTATTGG 59 19905837 19905856 CTTCCAATGATGAAACGTCG 59 NA Mus musculus 50 Ccdc66 ENSMUSG00000046753 ENSMUST00000050480,ENSMUST00000112290 2 2 2 80 14 28311959 28311977 AGTGAACATGAGCATGTCC 59 28311718 28311915 CCATTCATTCTCTGTGGCA 59 NA Mus musculus 50 Tmem164 ENSMUSG00000047045 ENSMUST00000112889,ENSMUST00000101198,ENSMUST00000087333,ENSMUST00000112896,ENSMUST00000112897 1 5 9 135 X 139240593 139240611 TACCTGCTTTGGAAAGGAG 59 139267142 139268743 AATTCACTTCGGTGACCAG 59 NA Mus musculus 50 Cltc ENSMUSG00000047126 ENSMUST00000060766,ENSMUST00000103186 3 2 3 90 11 86510839 86515726 GGAATATTTGACCAAGGTGG 58 86510768 86510786 ATAAACAATGGGCTGTGTC 57 NA Mus musculus 50 Zbtb44 ENSMUSG00000047412 ENSMUST00000115222,ENSMUST00000115220 2 2 3 60 9 30876375 30876395 CCTTGTTCAGTATGATCTTGG 58 30876417 30876435 AGGCATTTGAACAGAAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxo40 ENSMUSG00000047746 ENSMUST00000075869,ENSMUST00000114806 1 2 2 113 16 36966366 36968926 AAGTCCACAATCAGATCTGG 59 36966272 36966290 CGATGTTGAAAGGACAGGT 59 NA Mus musculus 50 Pygo2 ENSMUSG00000047824 ENSMUST00000107413 2 1 3 120 3 89234884 89234906 GCTGAGAGTATAGTCATACTAGC 59 89235094 89236385 GAATATGCAGGACCCTGAG 59 NA InUTR Mus musculus 50 Bri3 ENSMUSG00000047843 ENSMUST00000056578 2 1 2 206 5 145016707 145016725 TAACATCCACAGTCGAACG 59 145024991 145025009 TAAGTAAAGACCGCTCCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Frmd6 ENSMUSG00000048285 ENSMUST00000057859,ENSMUST00000061386 1 2 2 146 12 71994925 71995877 TGAGGAAATCGAGATGCTG 59 71995986 71998338 ACAATTAACCCTGAGTGTCC 59 NA Mus musculus 50 Vps37c ENSMUSG00000048832 ENSMUST00000087951 3 1 1 77 19 10780743 10780761 AGGAAATGCAGAATGACCC 59 10784763 10784781 GTTCTAACTGCAGGTCCTG 59 NA DesignNoJunction Mus musculus 50 Oxtr ENSMUSG00000049112 ENSMUST00000053306 3 1 1 62 6 112439153 112439171 CGTCTACATTGTACCGGTC 59 112439109 112439128 CAGATCTTGAAGCTGATGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 BB146404 ENSMUSG00000049872 ENSMUST00000069125 3 1 1 60 10 33815774 33815793 GAAGAACTGCACAAAGTCTC 59 33815733 33815752 CTTCTTCACTCTCCATAGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Apol10b ENSMUSG00000050014 ENSMUST00000089465,ENSMUST00000109777 1 2 2 91 15 77422570 77473640 GATTCCTTGACCTGGAGAG 59 77419237 77422515 GAGCTACTCCTTGCTTGAG 59 NA InUTR Mus musculus 50 Prmt1 ENSMUSG00000052429 ENSMUST00000107843,ENSMUST00000107842,ENSMUST00000107839 3 3 4 91 7 52233639 52234054 CCTCATAAAGGAGGTGGAC 59 52233566 52233584 CGTAGTCGTTCCTCTTCAC 59 NA Nonspecific Mus musculus 50 Tln2 ENSMUSG00000052698 ENSMUST00000040025,ENSMUST00000039662,ENSMUST00000085405,ENSMUST00000034771 3 4 5 80 9 67120468 67120487 AAATGACCACTGACTATGGG 59 67114721 67120425 GGAATCCAATCTCCTCTGG 59 NA Mus musculus 50 Defb37 ENSMUSG00000053695 ENSMUST00000066282 1 1 1 67 8 18990913 18990931 AACTTCCAGAACAACCCAG 59 18986393 18986412 CGACAGGTGTCTTTATTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Chchd3 ENSMUSG00000053768 ENSMUST00000066379 3 1 2 121 6 32842313 32842333 GATGCATTCTACAAAGAGCAG 59 32754017 32802154 TCATACCGCTTGAACTTGG 59 NA Mus musculus 50 Krt16 ENSMUSG00000053797 ENSMUST00000007280 2 1 2 142 11 100107823 100107935 CGAGAATATCCACTCCTCC 58 100107559 100107577 AACTCTGACTTTGGCTCTG 59 NA Mus musculus 50 Srcap ENSMUSG00000053877 ENSMUST00000084563 2 1 3 82 7 134696265 134696384 GTCCACATCTATAGGCTTATCAG 59 134696425 134696444 TCTCCCAACATTCTCTTCTG 59 NA Mus musculus 50 Slc39a8 ENSMUSG00000053897 ENSMUST00000081978,ENSMUST00000029810 1 2 2 80 3 135547737 135549774 CTCTGGCAGATATGTTTCCA 59 135549817 135549835 TGAAGAAGGTGAAATCCGT 58 NA Mus musculus 50 Cadps ENSMUSG00000054423 ENSMUST00000112658 1 1 3 90 14 13305979 13305997 AAGCTCGAAGACACAATCC 59 13300865 13305926 CTTTATCAACATGTGGCTCG 59 NA Mus musculus 50 Pcnxl3 ENSMUSG00000054874 ENSMUST00000113615 3 1 2 82 19 5686211 5686442 AAGAGAAACTGATTGGAGACC 59 5686149 5686167 CTCGGAAGAATCCGTACTG 59 NA Mus musculus 50 Smyd1 ENSMUSG00000055027 ENSMUST00000068379,ENSMUST00000114186 3 2 6 80 6 71175508 71187361 AACAATGGCAAGATTGAGC 59 71175446 71175466 CAGGAAGTCTATGTAGGACAC 59 NA Mus musculus 50 4930543L23Rik ENSMUSG00000055867 ENSMUST00000069631 2 1 1 71 11 58974892 58974910 GAAAGTCTTCCCACAACCT 59 58974839 58974857 TCCAAACATCCTTTCTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000016300 ENSMUSG00000056061 ENSMUST00000069943 2 1 1 211 2 180068629 180068647 TCGGAACTCATGTATGCTG 59 180073940 180073958 GTAGTCCAGTTGACATGTG 57 NA DesignNoJunction, InUTR Mus musculus 50 BC052328 ENSMUSG00000056069 ENSMUST00000069955 1 1 2 89 15 27594154 27594174 GGCAGAAGTAGATTTACTCAG 57 27592230 27594103 AATTCCTCATAGGCCTTCC 58 NA Mus musculus 50 St3gal5 ENSMUSG00000056091 ENSMUST00000069994,ENSMUST00000114112 3 2 2 87 6 72092467 72097073 GTGGTAATAAGGTTGAACAGTG 59 72097121 72097139 CCTCTGGGTAAGTCATCCT 59 NA Mus musculus 50 Actr3b ENSMUSG00000056367 ENSMUST00000088244 3 1 2 83 5 25304305 25315608 TCATTATCCCGTCATGTATCG 59 25315653 25315671 CATCGACTCCTCTCAACAC 59 NA Mus musculus 50 Setd3 ENSMUSG00000056770 ENSMUST00000071095,ENSMUST00000099383 2 2 4 296 12 109396052 109396070 AAGAAGAGGAAGTACGCTG 59 109351588 109356455 TATAGCCAGTTGTGATCAGG 58 NA DesignRelaxed Mus musculus 50 Cep110 ENSMUSG00000057110 ENSMUST00000028237,ENSMUST00000113034,ENSMUST00000113032 1 3 7 80 2 35023398 35024769 GCAGCTACAAGGTAAACAG 58 35024813 35024831 TTTGCTAGGTCCAAATGGT 59 NA Mus musculus 50 Ube2e2 ENSMUSG00000058317 ENSMUST00000076133 2 1 1 71 14 19462819 19462839 CCAGATTATCCGTTTAAACCC 58 19419468 19419488 CTGGCTGTTGATATTACAGTG 58 NA DesignNoJunction Mus musculus 50 Phtf1 ENSMUSG00000058388 ENSMUST00000055425 1 1 3 88 3 103785869 103789684 TTAATCAGAGTCACAGCGG 59 103789736 103789754 AGTAGCATAAGGCACAAGG 59 NA Mus musculus 50 Nrf1 ENSMUSG00000058440 ENSMUST00000115213 1 1 10 88 6 30065163 30067065 AAACAAAGGGTTGGTACAG 57 30067117 30067135 TAATTCACTTGGGCAACAG 57 NA Mus musculus 50 Gtf2i ENSMUSG00000060261 ENSMUST00000059042,ENSMUST00000111261,ENSMUST00000082057,ENSMUST00000111260,ENSMUST00000111259 2 5 5 80 5 134722758 134723100 TCAACACTAAAGCATTGCAG 59 134722697 134722716 CAGTGACCTCAATTTCAGGA 59 NA Mus musculus 50 Plekhh1 ENSMUSG00000060716 ENSMUST00000039928 2 1 2 81 12 80166746 80167613 CTACAAGTCTCCGAGTGAC 59 80167658 80167676 CTCCTCTCGAACAATCTGG 59 NA Mus musculus 50 Dlgap4 ENSMUSG00000061689 ENSMUST00000000094,ENSMUST00000070782,ENSMUST00000109568,ENSMUST00000109567 3 4 6 86 2 156536990 156571581 GCTTCCAAGTTCATCATGC 59 156571631 156571649 ACTGAGATGAACGGTTTCG 59 NA Mus musculus 50 Inadl ENSMUSG00000061859 ENSMUST00000041284,ENSMUST00000107031,ENSMUST00000107030,ENSMUST00000107033 1 4 10 80 4 98104099 98104118 AGGAAATTGGAGAAAGACTG 57 98104158 98107762 CTTTCTCTGGATATACATCTGG 57 NA Mus musculus 50 OTTMUSG00000000651 ENSMUSG00000062551 ENSMUST00000054932,ENSMUST00000110331 1 2 5 125 13 27948376 27948394 GTGAGCGAACTATCTACCA 58 27948483 27949378 ATCTCCATTCATGGTGCTC 59 NA Mus musculus 50 Lin28b ENSMUSG00000063804 ENSMUST00000079390 2 1 4 84 10 45101226 45138950 ATTCCAAGATGCTACAACTG 57 45101161 45101179 AGTAATGGCACTTCTTTGG 57 NA Mus musculus 50 Chd4 ENSMUSG00000063870 ENSMUST00000112392 1 1 3 92 6 125052309 125052499 AAAGAAAGACCACCAGGAC 59 125052555 125052573 CACACCATATGGTAGGCTC 59 NA Mus musculus 50 Cnnm2 ENSMUSG00000064105 ENSMUST00000099373 1 1 2 121 19 46943114 46946156 CTCTCCAGTTCCTTTGTCC 59 46951727 46951745 AATCTGAGTGATTCAGGCC 59 NA Mus musculus 50 D12Ertd647e ENSMUSG00000064215 ENSMUST00000085065,ENSMUST00000079294,ENSMUST00000066701,ENSMUST00000076702 2 4 5 91 12 104673712 104673730 AGATGACATCTTCAGCAGC 59 104674774 104674792 CTGTGTTAACAGGATGAGC 58 NA DesignNoJunction Mus musculus 50 4930430D24Rik ENSMUSG00000068046 ENSMUST00000089060,ENSMUST00000115153 1 2 2 75 X 35392848 35392866 TATACCTGATCACCAGCAG 58 35391964 35391982 GGAACTTGCAGATGAAGGT 59 NA DesignNoJunction, InUTR Mus musculus 50 Uty ENSMUSG00000068457 ENSMUST00000044500 2 1 2 81 Y 525833 560957 CAGACTGACTACTGGAAGC 59 523243 525790 GAAACTGAATTTCGACACTGG 59 NA Mus musculus 50 Ssb ENSMUSG00000068882 ENSMUST00000090852,ENSMUST00000090851,ENSMUST00000112260 3 3 3 151 2 69704341 69704553 AATTCAACAGGCTAAACCG 58 69704667 69704686 ATACTCATCCGTCACTTCAG 58 NA Mus musculus 50 Rgma ENSMUSG00000070509 ENSMUST00000094312,ENSMUST00000107458,ENSMUST00000107457 2 3 3 73 7 80554582 80554600 CAAGTCACCAATACACCTG 58 80562203 80562222 TTCTTGAAGATGATGGTGAG 57 NA DesignNoJunction Mus musculus 50 1700049G17Rik ENSMUSG00000070709 ENSMUST00000076770 3 1 3 82 7 28711354 28711372 CTGGATGCTACTCAGAAGG 59 28709604 28711312 GAGAGTTCTATATCCACTGAGAC 59 NA Mus musculus 50 6330408A02Rik ENSMUSG00000070814 ENSMUST00000108532 3 1 2 109 7 13846298 13846316 ATAGTGTAGCTCAGTGCCT 59 13846206 13846225 TTCACTCTCCAACAACACTC 59 NA DesignNoJunction Mus musculus 50 1700106N22Rik ENSMUSG00000071037 ENSMUST00000095188 1 1 2 84 17 85790965 85792807 TATATTCAGGGACCTTGCT 57 85793944 85793962 GACATCTGCAGAAATAGCA 57 NA Mus musculus 50 Rhox12 ENSMUSG00000071766 ENSMUST00000115146,ENSMUST00000096453 1 2 2 210 X 35461085 35461103 ATGACATCAAAGACGAGTG 57 35460342 35460911 AGGTTCTTCCTTGTGAGTG 59 NA DesignRelaxed Mus musculus 50 ENSMUSG00000072573 ENSMUSG00000072573 ENSMUST00000100641 3 1 1 72 5 135155258 135155276 GATTTCCTCCAGACCAGAG 59 135155311 135155330 CATCTTTCCTGAGTCCTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mup1 ENSMUSG00000073832 ENSMUST00000071005,ENSMUST00000107484,ENSMUST00000095049,ENSMUST00000107488,ENSMUST00000107489 3 5 5 81 4 61255444 61256233 CCATACTGTAAGAGATGAAGAG 57 61255384 61255402 CGTCACAGAATATTCACCA 57 NA Nonspecific Mus musculus 50 Olfr576 ENSMUSG00000073962 ENSMUST00000098213 3 1 1 84 7 110113624 110113642 TTTCAACAACTCCGAGGTC 59 110113690 110113708 GATAGGGATGGAGATCCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Prdm11 ENSMUSG00000075028 ENSMUST00000111272,ENSMUST00000111273 3 2 4 122 2 92826932 92829396 TACCAGCTATGATGAAGACG 58 92826829 92826847 GAAGATGAATAGAGCAGCG 58 NA Mus musculus 50 IGKV8-34 ENSMUSG00000076574 ENSMUST00000103375 2 1 1 61 6 69994263 69994281 CAGAAACCAGGACGATCTC 59 69994220 69994238 ACTCCAGATACCCTAGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV6-17 ENSMUSG00000076590 ENSMUST00000103391 1 1 1 72 6 70321912 70321930 TCACTTTCACCATCAGCAG 59 70321963 70321984 GGAGTACTATAATGTTGCTGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV7D-4 ENSMUSG00000076799 ENSMUST00000103609 3 1 2 190 14 53711062 53711269 GTTAAACTGGGTGAAGAGC 58 53711422 53711441 CTTTCTTGTCACCATCAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000010671 ENSMUSG00000078496 ENSMUST00000105721 2 1 2 291 4 146881736 146884867 TAAATACACCACAGGGTCTG 59 146886586 146886604 TTGTGAGGTACACAATGGG 59 NA DesignRelaxed Mus musculus 50 Etohi1 ENSMUSG00000078889 ENSMUST00000109028,ENSMUST00000109026,ENSMUST00000109025,ENSMUST00000109017 3 4 9 137 2 175694825 175800091 GGATTTAGTCACCTATGATGAC 58 175694503 175694729 CAACTGTAACCTATAGCTGTG 58 NA Nonspecific Mus musculus 50 ENSMUSG00000068790 ENSMUSG00000079354 ENSMUST00000112595,ENSMUST00000112594,ENSMUST00000112593 3 3 3 87 14 20386879 20387573 TCCTACAGCATTAAGGAGG 58 20386810 20386828 GCCTTCTGTTCTCATTCAG 58 NA Nonspecific Mus musculus 50 4930402F06Rik ENSMUSG00000079421 ENSMUST00000113010 2 1 2 129 2 35245118 35246002 CCCTTTCAGCATAAAGAAACTG 59 35236010 35236028 GTTAGTAGCTCTCATGCCC 59 NA Mus musculus 50 Rab7 ENSMUSG00000079477 ENSMUST00000113598,ENSMUST00000113597,ENSMUST00000113596,ENSMUST00000113600,ENSMUST00000095048 2 5 5 61 6 87950518 87954176 GCCCTTAAACAGGAAACAG 58 87950475 87950493 TCCAGTTTGATGGGTTCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 A2ASX7_MOUSE ENSMUSG00000079602 ENSMUST00000114915 3 1 1 61 2 9805420 9805440 CTCTTCTCTGTATTTCAGCTC 57 9805379 9805397 TTAGCTTTCACCATGTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Scoc ENSMUSG00000080138 ENSMUST00000116270 2 1 1 62 3 135626706 135626727 CACAAGACCGTTCATTAAAGAG 59 135626665 135626685 TCATCATCTTGGGTAACAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRBD2 ENSMUSG00000076491 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Bcl11a ENSMUSG00000000861 ENSMUST00000109516,ENSMUST00000000881,ENSMUST00000109514,ENSMUST00000109512 2 4 4 95 11 23985641 24058264 CACATAGCAGATAAACTTCTGC 59 24058320 24058338 ATATTCTGCACTCATCCCG 59 NA Mus musculus 50 Smarcb1 ENSMUSG00000000902 ENSMUST00000000925 1 1 1 80 10 75367309 75368782 TCATCAAGCTGAACATCCA 58 75367247 75367266 GGGAGTTCTCTTTCTCTGAC 59 NA Mus musculus 50 Btbd14b ENSMUSG00000001910 ENSMUST00000001975 3 1 1 188 8 87197193 87198672 CTGTCAAGTACTACTGCCAG 59 87197024 87197043 GTTCTATCTTGCAAGTGTCG 58 NA Mus musculus 50 Peg3 ENSMUSG00000002265 ENSMUST00000086313 1 1 2 82 7 6661110 6661345 CACTGTTGAAAGGAATGCT 58 6661046 6661064 TACTCATAGGGCTCATCCT 58 NA Mus musculus 50 Rgs20 ENSMUSG00000002459 ENSMUST00000002533 2 1 1 80 1 4900737 4902406 TCTCCTAAAGAGGTCAGCT 59 4900675 4900693 GAATATGTGCTGGGATGGA 59 NA Mus musculus 50 Tgfb1 ENSMUSG00000002603 ENSMUST00000002678 3 1 1 122 7 26477443 26477462 TTCAATACGTCAGACATTCG 58 26477544 26479250 GCTATATTTCTGGTAGAGTTCC 57 NA Mus musculus 50 Mical3 ENSMUSG00000003178 ENSMUST00000088567,ENSMUST00000077159 2 2 2 92 6 120971263 120971281 AAAGTGAAGTACATGGCGA 59 120959188 120971207 CTTTATGGAGCCCTGTCTC 59 NA Mus musculus 50 Polr2e ENSMUSG00000004667 ENSMUST00000099500 1 1 2 100 10 79499575 79499593 TTCTAGCAAGCTTCGTGAG 59 79499328 79499511 GGATGATCTTCACGACCTG 59 NA InUTR Mus musculus 50 Fcer1a ENSMUSG00000005339 ENSMUST00000049706 2 1 1 99 1 175152918 175155442 ATGTAACGCAAGATTGGCT 59 175152837 175152855 ACATTCCAGTTCTTCCAGC 59 NA Mus musculus 50 Ctcf ENSMUSG00000005698 ENSMUST00000005841 2 1 1 86 8 108190678 108194135 TATGCCAGTGTAGAAGTCAG 58 108194184 108194202 ATAACTGCACAAACTGCAC 58 NA Mus musculus 50 Zbtb32 ENSMUSG00000006310 ENSMUST00000108151 3 1 3 138 7 31375881 31376086 CAAGATCAGAGGATCCCAC 59 31375667 31375685 CAGACGTTTCTATCTGCCA 59 NA Mus musculus 50 Bcl2l1 ENSMUSG00000007659 ENSMUST00000089053,ENSMUST00000007803,ENSMUST00000109820,ENSMUST00000049893 2 4 4 60 2 152655236 152655254 AGATGCAGGTATTGGTGAG 59 152655194 152655213 AGGTGGTCATTCAGATAGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hipk1 ENSMUSG00000008730 ENSMUST00000029438,ENSMUST00000106845,ENSMUST00000106838 1 3 3 80 3 103550764 103550782 TACTATCATTGTGCCTCCT 57 103549298 103550720 TTACTGCTAAGGAGACCTG 57 NA Mus musculus 50 Pabpc4 ENSMUSG00000011257 ENSMUST00000097900 1 1 6 60 4 122975268 122975286 CATGCCAAGAAAGAAGCTG 59 122975311 122975330 TCTTGTCTAAGAGGTAGCAG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Bnip2 ENSMUSG00000011958 ENSMUST00000034754,ENSMUST00000085393 1 2 2 80 9 69843927 69843946 CTTTACCAGAAGATGACAGC 58 69843989 69844902 TAACTTCTAAGGAGCCAGG 57 NA Mus musculus 50 Ndufs2 ENSMUSG00000013593 ENSMUST00000013737 3 1 1 78 1 173168688 173168709 GCTTCTGGATGACATTTATGAG 59 173168489 173168649 ATTGTTGGTCAGCATCTCC 59 NA DesignRelaxed Mus musculus 50 B230208H17Rik ENSMUSG00000015087 ENSMUST00000058137 1 1 1 80 2 25440349 25440367 GACTGAAGAATGACTCCGA 58 25439673 25440306 TGTCTCTATCTTCGTCACTG 58 NA Mus musculus 50 Unkl ENSMUSG00000015127 ENSMUST00000039734,ENSMUST00000115158 3 2 3 94 17 25338036 25338054 GATGGTGTACCTGATCTGC 59 25338112 25342553 AAGTTACTGTCTTGCCACC 59 NA Mus musculus 50 Nipsnap3a ENSMUSG00000015247 ENSMUST00000107665 3 1 2 101 4 53029987 53030006 TCCTCATTCCAAATTTGGCT 59 53030069 53033991 GAACATGAACTTCCTTGGGA 59 NA Mus musculus 50 Gata5 ENSMUSG00000015627 ENSMUST00000015771,ENSMUST00000108890 1 2 2 293 2 180067159 180068531 GTACCTGACTTCTTGGAGG 58 180063021 180063039 CTTCATGTAGAGGCCACAG 59 NA DesignNoJunction Mus musculus 50 1700016C15Rik ENSMUSG00000015962 ENSMUST00000016106 3 1 1 61 1 179673546 179683053 TTTATGAGAGTGGTTGGGA 57 179683077 179683096 ATTAACTGGTCTAGGATGCA 58 NA DesignRelaxed Mus musculus 50 Il13ra1 ENSMUSG00000017057 ENSMUST00000033418 2 1 1 80 X 33673062 33681214 CTATACTCTGTACTATTGGTACAGC 59 33681252 33681270 GCAATGTGTTGACCTTCTC 59 NA Mus musculus 50 Nol11 ENSMUSG00000018433 ENSMUST00000106757,ENSMUST00000018577 1 2 2 80 11 107032455 107032476 TCCTCTATTTGAAGTGTACTGG 59 107029694 107032415 AATCCATAATCTGGCTCACG 59 NA Mus musculus 50 Cbx1 ENSMUSG00000018666 ENSMUST00000093943 3 1 3 81 11 96668070 96669507 ATTAGCCCTGTCTTCTTCC 58 96669552 96669570 CAATTCCAGCACTGAACAG 59 NA InUTR Mus musculus 50 Slc22a5 ENSMUSG00000018900 ENSMUST00000019044 1 1 1 82 11 53685162 53687181 GATCCAAGTGAGTTACAAGAC 58 53685100 53685118 CTGATATTCCGTGTTCGGA 59 NA Mus musculus 50 Nedd1 ENSMUSG00000019988 ENSMUST00000020163 3 1 1 81 10 92155676 92157739 CACCAATCAGAGATGATGCT 59 92154763 92154781 TGTGGTAGAAAGTCAAGGC 59 NA Mus musculus 50 Hkdc1 ENSMUSG00000020080 ENSMUST00000020277 3 1 1 80 10 61857993 61858154 AGGAGAAACGAGTTTGACC 59 61857931 61857949 ATCTTCATAGCCACAGGTC 58 NA Mus musculus 50 Drg1 ENSMUSG00000020457 ENSMUST00000020741 1 1 1 80 11 3152273 3152654 GTGAGAATTTACACCAAACCG 59 3152213 3152233 CACAGTGGTCCTAGAATAAGG 59 NA Mus musculus 50 Cenpo ENSMUSG00000020652 ENSMUST00000020981,ENSMUST00000058541 2 2 3 82 12 4215419 4216526 AACTTGAGAGTGACTTCTGC 59 4215356 4215375 TTTATAGGTGAACGACAGCA 59 NA Mus musculus 50 Ntn1 ENSMUSG00000020902 ENSMUST00000021284,ENSMUST00000108674 2 2 2 82 11 68040092 68040110 TGTGACTCCTATTGCAAGG 59 68026827 68040046 ATCTGGACAGCATAGTCCT 59 NA Mus musculus 50 Higd1b ENSMUSG00000020928 ENSMUST00000107073,ENSMUST00000107072,ENSMUST00000021302 1 3 3 72 11 102698627 102698645 TCTGATTCACACCAGAGTG 58 102698681 102699238 CATTGTATACATGGCACCA 57 NA DesignNoJunction Mus musculus 50 Lrrc9 ENSMUSG00000021090 ENSMUST00000066073 3 1 1 80 12 73561840 73561858 CGTTTCTGCTAACTGAGCT 59 73561900 73564322 AGGAGTTAAACCAGTCATCAG 59 NA Mus musculus 50 Ly86 ENSMUSG00000021423 ENSMUST00000021860 1 1 1 80 13 37466907 37468763 GCATCATTCTGAGACAGGA 59 37468804 37468825 AGTAGTTCAGAATAGAAGAGCC 59 NA Mus musculus 50 9330134C04Rik ENSMUSG00000021470 ENSMUST00000095724,ENSMUST00000109776 1 2 7 66 13 63972072 63973116 GAAACACCTAGAGACCCTG 58 63973146 63973164 CACTGATGTCGCTGTAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700001L19Rik ENSMUSG00000021534 ENSMUST00000022007 2 1 1 82 13 68750088 68750107 TAACCAGAAATTACACCGAG 57 68750152 68751722 CAGTCCTTTCTTGTTCCTC 57 NA Mus musculus 50 Sucla2 ENSMUSG00000022110 ENSMUST00000022706 2 1 1 80 14 73979226 73979244 CCTGAAGCCATTGTAAAGG 58 73979288 73981500 CATCTTCTGTGCAAGTGTC 58 NA Mus musculus 50 Ripk3 ENSMUSG00000022221 ENSMUST00000022830 3 1 1 81 14 56406119 56406138 AAAGCGAGTGATGTCTACAG 59 56405747 56405956 AAGTCTTGTCTACCAACTCAG 59 NA Mus musculus 50 Mgrn1 ENSMUSG00000022517 ENSMUST00000090460,ENSMUST00000023159,ENSMUST00000070658 1 3 3 80 16 4907420 4907438 CCATCCTGAAGGTTACCTC 59 4907482 4910733 GTGACATAGGGAAACTGGA 58 NA Mus musculus 50 Dgat1 ENSMUSG00000022555 ENSMUST00000023214 1 1 1 80 15 76337007 76337025 GGTATCCTGAATTGGTGTG 57 76334992 76335105 GATGCCATACTTGATAAGGT 57 NA Mus musculus 50 Prmt5 ENSMUSG00000023110 ENSMUST00000023873 1 1 1 80 14 55135386 55135404 GTTCATTCAGGAACCTGCT 59 55135019 55135342 GTATTCCAGTCCCTTCCTG 59 NA Mus musculus 50 A830023I12Rik ENSMUSG00000023284 ENSMUST00000050849 2 1 3 127 5 110552781 110552799 ATCATTTGAGGATGTGGCT 58 110552890 110556908 GTTGGTTTCCCAAGAAGAC 58 NA Mus musculus 50 Map3k8 ENSMUSG00000024235 ENSMUST00000025078 1 1 1 81 18 4339597 4340561 CCACCATGATATTAAACCTAGC 58 4339537 4339555 CATCTTAACACTCAGGCCA 59 NA Mus musculus 50 Nr3c1 ENSMUSG00000024431 ENSMUST00000115567,ENSMUST00000115571,ENSMUST00000115569,ENSMUST00000025300,ENSMUST00000097592 2 5 5 81 18 39580276 39580295 TACAAAGATTGCAGGTATCC 57 39575492 39580232 AGACCTTCCTTAGGAACTG 57 NA Mus musculus 50 Mal2 ENSMUSG00000024479 ENSMUST00000025356 1 1 1 60 15 54430095 54430114 CAGTATAACATCAACGTGGC 58 54432240 54432259 AACCATAACAAGCTGTTGTC 58 NA DesignNoJunction Mus musculus 50 Gnaq ENSMUSG00000024639 ENSMUST00000025541 1 1 1 86 19 16406625 16406643 GTGCTTAGAGTTCGAGTCC 59 16406693 16409486 CCCTACATCGACCATTCTG 59 NA Mus musculus 50 Ms4a2 ENSMUSG00000024680 ENSMUST00000025583 2 1 1 80 19 11692999 11693357 CTTCTTTCACCACAGAACTG 58 11692938 11692957 AGATAGTGAACAACACAGCA 59 NA Mus musculus 50 Ostf1 ENSMUSG00000024725 ENSMUST00000025631 2 1 1 81 19 18668406 18670858 ATCTACATCACTGACATGAGTG 59 18668346 18668364 CATAGTTGCTCGGGATCAG 59 NA Mus musculus 50 Cdc42bpg ENSMUSG00000024769 ENSMUST00000025681 3 1 1 83 19 6322808 6322826 CTTGGACATCTCTGTCCAG 59 6322872 6324526 GTTCTGAGACCTGTATCAGG 59 NA Mus musculus 50 Pnliprp2 ENSMUSG00000025091 ENSMUST00000026081 2 1 1 80 19 58845938 58848564 AGTGGTAACTTTACTCGTTGG 59 58848606 58848624 GACCAAGATGTACCCACTC 59 NA Mus musculus 50 Zdhhc16 ENSMUSG00000025157 ENSMUST00000026154 3 1 1 83 19 42012928 42013302 CAGCATCTGTAATAGGTGTG 58 42014111 42014129 TAGCGATGGTTATAGTGGC 58 NA Mus musculus 50 Tlx1 ENSMUSG00000025215 ENSMUST00000026236 1 1 1 102 19 45225964 45225982 ACAAAGGACAGGTTCACAG 59 45228071 45228089 TTTCCAGCTCACAGATCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mgea5 ENSMUSG00000025220 ENSMUST00000070185,ENSMUST00000026243 1 2 2 82 19 45848240 45850545 CCCTACAGAATACTGTGGC 59 45848176 45848194 GTAGAAGCTTCTCACCCAC 59 NA Mus musculus 50 6620401K05Rik ENSMUSG00000025646 ENSMUST00000045011 3 1 1 80 9 108974282 108974300 TCACATTTCCTTCTTGAGC 57 108971900 108974238 CAGTGATTGGAGCTTTCTG 58 NA Nonspecific Mus musculus 50 Hadha ENSMUSG00000025745 ENSMUST00000026843 2 1 1 80 5 30470828 30471783 TGACATCAACATGCTATCC 57 30470766 30470785 TTCTCAAACATTCTCTGACC 57 NA Mus musculus 50 Cwf19l2 ENSMUSG00000025898 ENSMUST00000027027 3 1 1 81 9 3421304 3421325 GAATTGAATCCATACTGGAAGG 58 3421364 3428676 CTCCTTTAGCTTTAGTAACTGG 58 NA Mus musculus 50 Clk1 ENSMUSG00000026034 ENSMUST00000034868,ENSMUST00000027195 1 2 2 80 1 58469837 58469857 GGGAACATTTAGCAATGATGG 59 58469568 58469795 AATATCTGCGTTTCCTGGT 58 NA Mus musculus 50 Il1r1 ENSMUSG00000026072 ENSMUST00000027241,ENSMUST00000114795 1 2 2 80 1 40369343 40369824 TGACTATGTTGGAGAAGATACC 59 40369862 40369883 CTCACTAGAATGATAATCAGCC 58 NA Mus musculus 50 Tesp1 ENSMUSG00000026125 ENSMUST00000027299 3 1 1 198 1 34555461 34556078 GTCCAGAAGGAGTTATGTG 57 34556865 34556883 GGTAGTCAGATGGTGTGAG 59 NA DesignNoJunction Mus musculus 50 Slco6c1 ENSMUSG00000026331 ENSMUST00000027569 1 1 1 80 1 99016564 99022183 GAAGACAAAGCATAGAGTTGTG 59 99016505 99016524 TTGATCTGTTCGGAACTGAG 59 NA Mus musculus 50 Niban ENSMUSG00000026483 ENSMUST00000086267,ENSMUST00000097541 1 2 2 83 1 153550982 153553123 TACATGCAAGAGCTCATGG 59 153553170 153553188 TATTCTGGAAGCCTCTCCT 59 NA Mus musculus 50 Eprs ENSMUSG00000026615 ENSMUST00000046514 1 1 1 80 1 187221134 187222281 CAAAGACAGTAAGCATGAAGAG 59 187222321 187222340 TGCAGTTGTATGATGTCTCC 59 NA Mus musculus 50 Eng ENSMUSG00000026814 ENSMUST00000009705,ENSMUST00000113272 2 2 2 103 2 32535844 32536722 CTGACCTGTCTGGTAAAGG 59 32536788 32536807 ATAGATGTACCAGAGTGCAG 58 NA Mus musculus 50 Fcnb ENSMUSG00000026835 ENSMUST00000028179 1 1 1 85 2 27938426 27938444 GGTGCCAAAGGAGATAGAG 59 27936129 27936421 TCTCCTTGGTTTCCTTTGG 59 NA Mus musculus 50 Pax6 ENSMUSG00000027168 ENSMUST00000090397,ENSMUST00000037848,ENSMUST00000111087,ENSMUST00000111086,ENSMUST00000111085,ENSMUST00000111084,ENSMUST00000111083,ENSMUST00000111082,ENSMUST00000090391,ENSMUST00000111078 3 10 13 83 2 105535600 105536431 GACCACTTCAACAGGACTC 59 105536477 105536496 CAGTACTGAGACATGTCAGG 59 NA Mus musculus 50 Syt13 ENSMUSG00000027220 ENSMUST00000028648 1 1 1 111 2 92781128 92783219 TCAGAACGGTGTAGTTGAG 58 92783294 92783312 CTTCTGGTCATAGTCCAGG 58 NA Mus musculus 50 Casc5 ENSMUSG00000027326 ENSMUST00000099542,ENSMUST00000028799,ENSMUST00000028802 1 3 3 93 2 118885332 118888107 CAAACCAGGAACCTAATCCT 59 118889786 118889804 ATGTGAGACTCTGTCTGGA 59 NA Mus musculus 50 Nphp1 ENSMUSG00000027378 ENSMUST00000110358 1 1 3 178 2 127605854 127614523 AGGTTGATAGTTTGGTGACTG 59 127566895 127603107 GAACTCAGCCTCATAGTTCC 59 NA Mus musculus 50 1700020A23Rik ENSMUSG00000027409 ENSMUST00000110281 2 1 2 124 2 130231359 130231377 TCGAACCATCTTCTCAACG 59 130231542 130231560 CCATTGGGAGAAGTCTGTG 59 NA DesignNoJunction Mus musculus 50 Pmf1 ENSMUSG00000028066 ENSMUST00000056370,ENSMUST00000075250,ENSMUST00000090958 1 3 3 224 3 88199921 88199939 AAGTACGGAAACAGGAAGC 59 88198381 88198399 CATTACTGCCTGGAAACTG 58 NA DesignNoJunction, InUTR Mus musculus 50 Pmf1 ENSMUSG00000028066 ENSMUST00000056370,ENSMUST00000075250,ENSMUST00000090958 2 3 3 227 3 88199924 88199942 ATCAAGTACGGAAACAGGA 58 88198381 88198399 CATTACTGCCTGGAAACTG 58 NA DesignNoJunction, InUTR Mus musculus 50 Apoa1bp ENSMUSG00000028070 ENSMUST00000029708 3 1 1 114 3 87860987 87861005 CTTCAGTTTCAAGGGTGAC 58 87860682 87860910 CTTCTCTACATCCCATCCTG 58 NA Mus musculus 50 Abcd3 ENSMUSG00000028127 ENSMUST00000029770 2 1 1 81 3 121472170 121472283 TTTATGTTCCTCAGCGACC 59 121472107 121472128 TTCTGATCTTCCTTTCCATCTG 59 NA Mus musculus 50 Vcp ENSMUSG00000028452 ENSMUST00000030164 1 1 1 80 4 42997219 42997239 AGTAACCTGGGAAGATATTGG 58 42996432 42997178 GGATGTTCCACAGGATACTG 59 NA Mus musculus 50 Sh3gl2 ENSMUSG00000028488 ENSMUST00000107189 2 1 4 114 4 85025313 85027326 ATATAGAACAGGTGAGCCAG 58 85027403 85282713 CAGGGAACTCTTTCTTCCA 58 NA Mus musculus 50 Ift74 ENSMUSG00000028576 ENSMUST00000107104,ENSMUST00000030311 2 2 2 86 4 94321572 94325206 GCCTAGAAACTGAAATAGCA 57 94325255 94325273 CTCGATGGGACTCTAACTC 58 NA Mus musculus 50 Ephb2 ENSMUSG00000028664 ENSMUST00000059287,ENSMUST00000105846,ENSMUST00000105845 1 3 3 110 4 136211335 136211835 ATGATGGAGGACATTCTCC 58 136211243 136211261 CTCTACAGACTGGATCTGG 58 NA Mus musculus 50 Trspap1 ENSMUSG00000028898 ENSMUST00000030730,ENSMUST00000105962,ENSMUST00000105961,ENSMUST00000105959 2 4 5 90 4 131869930 131870127 CCATGCAGACATATGAAGAG 58 131867873 131867891 TCCATGAACTCTTTGTTGG 57 NA Mus musculus 50 Acads ENSMUSG00000029545 ENSMUST00000031524 3 1 1 85 5 115561413 115561653 ATATCCAGTTCAAGCTGGC 59 115561346 115561364 GTTGTCTTTCAACATGGCA 58 NA Mus musculus 50 2700094F01Rik ENSMUSG00000029782 ENSMUST00000115157,ENSMUST00000115160,ENSMUST00000058831 2 3 4 80 6 30442719 30444752 AGCTACAAATAGGAGAGGC 58 30442657 30442677 CATTCAGAGTTGGAATGAGAG 58 NA Mus musculus 50 2410003K15Rik ENSMUSG00000029815 ENSMUST00000031839 1 1 1 116 6 49025238 49025257 CTATGGTCCACTACCTTGTG 59 49032916 49034510 CCATACTCCCAAAGTCCAC 59 NA Mus musculus 50 2410003K15Rik ENSMUSG00000029815 ENSMUST00000031839 2 1 1 118 6 49025238 49025257 CTATGGTCCACTACCTTGTG 59 49032918 49034512 CACCATACTCCCAAAGTCC 59 NA Mus musculus 50 Pole4 ENSMUSG00000030042 ENSMUST00000095786 1 1 1 90 6 82598021 82601440 TTTCTAGAAGGCACTTTGGA 58 82597950 82597968 AAAGCTGAGGCTTACAGAG 59 NA InUTR Mus musculus 50 Rgs10 ENSMUSG00000030844 ENSMUST00000033133 2 1 1 96 7 135517545 135532486 CAGGACCAGATCTTCAATCTC 59 135517469 135517487 CTTCCTCTTCCTCAGTTCG 59 NA Mus musculus 50 Uqcrc2 ENSMUSG00000030884 ENSMUST00000033176 3 1 1 80 7 127797507 127797526 AATGCCAGTTACTCAGACTC 59 127797568 127799626 AGCATTGATAACCTCTCCAG 59 NA Mus musculus 50 Fgf16 ENSMUSG00000031230 ENSMUST00000033581 1 1 1 93 X 102967950 102969284 TCTATGGATCGAAGAAACTCAC 59 102969338 102969356 TGTTTGTACAAGGTGGAGG 59 NA Mus musculus 50 Zrsr2 ENSMUSG00000031370 ENSMUST00000112289,ENSMUST00000033736,ENSMUST00000090840 1 3 3 92 X 160395906 160395924 TAAGAAGTACTTGGCCCTC 58 160394470 160395850 TCTTTCTGTGCCAATTCTG 57 NA Mus musculus 50 2210023G05Rik ENSMUSG00000031877 ENSMUST00000043183 3 1 1 101 8 107491265 107491283 CTTCCTCAAGGATGTCAGG 59 107491347 107491669 GTGAGGTTAAGTTTCATGCC 59 NA Mus musculus 50 4932417I16Rik ENSMUSG00000031951 ENSMUST00000034429 2 1 1 83 8 114439213 114439231 TGATCAATGGGACAAGTCC 59 114438486 114439169 CAGTGGTAACATTTCTTTCCTG 59 NA Mus musculus 50 Dcun1d5 ENSMUSG00000032002 ENSMUST00000034499 1 1 1 80 9 7203487 7203507 AAGTCTATGTTAGCTCTGCTG 59 7203548 7205309 ATACTTTGATTGCTCCAGGT 59 NA Mus musculus 50 Lysmd2 ENSMUSG00000032184 ENSMUST00000034702 3 1 1 100 9 75483500 75483519 CCAGGAAACTCAAAGAAGAG 58 75485075 75485094 TTCTGTGATCTGGATCAGTC 58 NA DesignNoJunction, InUTR Mus musculus 50 Loxl1 ENSMUSG00000032334 ENSMUST00000061799,ENSMUST00000064417 2 2 2 126 9 58160111 58160129 TATGAGAACTACGATCCCG 57 58160001 58160021 GCTGGAAGGGATAGATGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Me1 ENSMUSG00000032418 ENSMUST00000034989 2 1 1 104 9 86539994 86540013 TAAGGATCCACTGTACATCG 58 86513433 86539927 ATGCCATATTTGGAAGACG 57 NA Mus musculus 50 Lmo2 ENSMUSG00000032698 ENSMUST00000111143,ENSMUST00000111140,ENSMUST00000111139,ENSMUST00000040619 1 4 4 60 2 103821165 103821185 GTAGGTGACAGATACCTTCTC 59 103821205 103821225 ACTCGTAGATGTCTTGTTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Troap ENSMUSG00000032783 ENSMUST00000039665 3 1 1 92 15 98911368 98911627 TAAAGTTCAGCAGGCTCAG 59 98912266 98912285 AACTTCATAGCAATCTGCCT 59 NA Mus musculus 50 Rag2 ENSMUSG00000032864 ENSMUST00000044031 2 1 2 87 2 101468332 101468352 GAAGTACACTTCATACCTCTC 57 101469523 101469541 GCTATGTTATGACCCACTG 57 NA DesignNoJunction, InUTR Mus musculus 50 Slc16a8 ENSMUSG00000032988 ENSMUST00000039752 2 1 1 60 15 79084416 79084434 ACTCCGAAGTGAAGTTTCC 59 79084236 79084392 ATTGCTTCTGCTTCTTCCT 59 NA DesignRelaxed, InUTR Mus musculus 50 Myh2 ENSMUSG00000033196 ENSMUST00000018641,ENSMUST00000018640 3 2 2 82 11 66991803 66991821 ATTACCCATTTGTCAGCCA 59 66991867 66992348 GATAGCACTATCAGTGGCC 59 NA Mus musculus 50 Bai3 ENSMUSG00000033569 ENSMUST00000115218,ENSMUST00000115223,ENSMUST00000115225,ENSMUST00000041838 2 4 4 80 1 25188236 25278613 CACAATAAGAGCATCTGCAC 59 25188175 25188193 CTCTGTCAAGACCCAACAG 59 NA Mus musculus 50 Lgi3 ENSMUSG00000033595 ENSMUST00000047331 3 1 1 81 14 70932586 70932607 CTCAACTCTAACAAGTTCACAC 59 70932646 70932997 TGTTCTCTATGAAGAGGTACTG 58 NA Mus musculus 50 Zfp446 ENSMUSG00000033961 ENSMUST00000045810,ENSMUST00000108538,ENSMUST00000108537,ENSMUST00000108535,ENSMUST00000108536 1 5 5 89 7 13565311 13567195 CAAACAGGAAGGATCCAGG 59 13567248 13567266 CACTGTGTCGTACTTCTCC 59 NA DesignNoJunction Mus musculus 50 Kcnk1 ENSMUSG00000033998 ENSMUST00000046765 1 1 1 85 8 128549300 128553402 AATCACGTGTTACCTGCTC 59 128553451 128553469 TGAACTTCTTCAGCTCGTG 59 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111696,ENSMUST00000111695,ENSMUST00000111694,ENSMUST00000111678,ENSMUST00000111677,ENSMUST00000111676,ENSMUST00000111687,ENSMUST00000111685,ENSMUST00000111684,ENSMUST00000111672 1 10 23 80 2 84443394 84443412 CTTTGGAGGAAGAGTTGGA 58 84443048 84443350 GCTAAATCTTCTGCATGGG 58 NA Mus musculus 50 Bzrap1 ENSMUSG00000034156 ENSMUST00000039627,ENSMUST00000100644,ENSMUST00000107939,ENSMUST00000107936,ENSMUST00000039599,ENSMUST00000107932 1 6 6 80 11 87593011 87593029 TATCAATGTCACCGAACCC 59 87593073 87593717 TGTCTCCAAACACCTTGAG 59 NA Mus musculus 50 Slc24a1 ENSMUSG00000034452 ENSMUST00000037798 1 1 1 161 9 64780010 64780028 TTGAATCAGGAAGCCAGAG 59 64776506 64778990 CTCATCCACATCTTCCTGG 59 NA Mus musculus 50 Ttyh2 ENSMUSG00000034714 ENSMUST00000045779,ENSMUST00000100242 1 2 2 80 11 114570105 114570123 TTCTGCTAAACAACTCCGA 58 114570167 114571366 CTAGGTAGTCCTTGTGCAG 59 NA Mus musculus 50 B3galt1 ENSMUSG00000034780 ENSMUST00000042456,ENSMUST00000112346 1 2 2 60 2 67956108 67956126 CCGTTCAGTCACCTAACAG 59 67956150 67956168 GTCGAGTTCTTATGTTGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Foxa1 ENSMUSG00000035451 ENSMUST00000044380 1 1 1 60 12 58644259 58644277 TGACCATGAACACCATGAC 59 58644217 58644236 TAGGACATGTTGAAGGAAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Wdr32 ENSMUSG00000035572 ENSMUST00000107798,ENSMUST00000044459 1 2 2 81 4 45385876 45385894 TTACAGCTGCATCCTAAGG 59 45385939 45386796 CATAGACACAGGTCCACTC 59 NA Mus musculus 50 1810020D17Rik ENSMUSG00000035642 ENSMUST00000075718,ENSMUST00000042627 2 2 3 80 7 104713802 104724107 GGGATCACAGATTTCAGCT 59 104713740 104713759 CCTTGCACTTTCATTTGTCC 59 NA InUTR Mus musculus 50 Dym ENSMUSG00000035765 ENSMUST00000039608 1 1 1 80 18 75389816 75402946 ACATTGACCTGGTGATCTC 58 75402990 75403008 TTTCCAAGACCCTTTCCAC 59 NA Mus musculus 50 Nme5 ENSMUSG00000035984 ENSMUST00000079287,ENSMUST00000115774 3 2 2 88 18 34738266 34738284 CAAGCCAGATGTTGTTGAC 59 34731300 34738214 GGTGTAGTTTCCGTCTCTG 59 NA Mus musculus 50 Srp72 ENSMUSG00000036323 ENSMUST00000101087 2 1 1 80 5 77405535 77407617 GTTAGCCAATAACTCCCTG 57 77407660 77407679 ATTGTCTTCAAGGCATTCTC 58 NA Mus musculus 50 Npy1r ENSMUSG00000036437 ENSMUST00000039303 2 1 1 109 8 69228453 69228471 TCTTACACGACTCTCCTCC 59 69228653 69228672 TCCATCATGTTGTTTCTCCT 58 NA DesignNoJunction Mus musculus 50 Wtip ENSMUSG00000036459 ENSMUST00000038537 2 1 1 82 7 34902373 34903703 ACTATCATACGGTGTTTGCA 59 34901661 34901679 ACGAATGGTTGTCTCACAG 59 NA Mus musculus 50 Rnf13 ENSMUSG00000036503 ENSMUST00000041826 1 1 1 80 3 57600198 57606377 TCCAACGACATTGATACAC 57 57606420 57606439 ATCTTTCAGGGAATTAGCTG 57 NA Mus musculus 50 Slc45a4 ENSMUSG00000036649 ENSMUST00000054266 1 1 1 80 15 73414814 73414832 TTGTCTCGATGAGCATCTC 59 73412545 73414770 GACTGTGGTGGACATACTC 59 NA Nonspecific, InUTR Mus musculus 50 Zscan12 ENSMUSG00000036721 ENSMUST00000053293,ENSMUST00000099720 1 2 2 132 13 21458505 21458523 CAGGTAACGTTTCAGGAGG 59 21458619 21460432 CAACACCTGAAACTTGCTC 59 NA Mus musculus 50 Foxa2 ENSMUSG00000037025 ENSMUST00000109964,ENSMUST00000047315,ENSMUST00000109963 3 3 3 77 2 147870488 147870506 ACATACATGAGCATGTCCG 59 147870429 147870447 GGATGACATGTTCATGGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Nenf ENSMUSG00000037499 ENSMUST00000046770 2 1 1 83 1 193130965 193133812 CTCACTCACGACACTACTG 59 193130900 193130919 GTACTTGGCTTTGTACACCT 59 NA Mus musculus 50 Bclaf1 ENSMUSG00000037608 ENSMUST00000043881,ENSMUST00000092678,ENSMUST00000100045 2 3 3 80 10 20047948 20047968 GTTCACTTCATACCAGAAAGC 59 20048009 20049130 GAGATGTCAATCCTCCTGTG 59 NA Mus musculus 50 Bri3bp ENSMUSG00000037905 ENSMUST00000049040 2 1 1 213 5 125922257 125932052 CAGAAGTTACTGTCCAGGC 59 125934782 125934800 GAGACAAGAACCAGTAGGC 59 NA DesignNoJunction Mus musculus 50 Mll3 ENSMUSG00000038056 ENSMUST00000045291,ENSMUST00000088253,ENSMUST00000088250 2 3 3 80 5 24794855 24794873 CTCCCAGATTAGCAACCTC 59 24793649 24794813 TATACCCAGAAAGACCATTGC 59 NA Mus musculus 50 Cdon ENSMUSG00000038119 ENSMUST00000042842 2 1 1 80 9 35271799 35277453 CATTCCTCACAGTTGTTCC 58 35277497 35277515 GCTCATCATTCTGAGAAGC 58 NA Mus musculus 50 Tcte2 ENSMUSG00000038347 ENSMUST00000089013 3 1 2 80 17 13854630 13864936 CGTTCAAGTGATACCATGC 58 13854568 13854588 GATGTTAGTTGAGTTACTCCG 58 NA Mus musculus 50 Birc7 ENSMUSG00000038840 ENSMUST00000108875,ENSMUST00000087504 3 2 2 61 2 180666005 180666024 AAAGAATCCAGACCTACACC 59 180666129 180666147 ATCTTCTGGTTCTTCTCGC 59 NA DesignNoJunction Mus musculus 50 Garnl3 ENSMUSG00000038860 ENSMUST00000113174,ENSMUST00000043162,ENSMUST00000102810 1 3 4 80 2 32941441 32941459 TCTCAGAAGACCTAGGCTG 59 32919583 32941398 CATCACTAGAGATGAGCAGC 59 NA Mus musculus 50 4930591A17Rik ENSMUSG00000039138 ENSMUST00000041998 1 1 1 88 2 179150568 179150586 TACTCACCTGAATGAGCTC 58 179151189 179151207 TAGCCTTTCTTGGTTGAGC 59 NA DesignNoJunction Mus musculus 50 2010001E11Rik ENSMUSG00000039339 ENSMUST00000045526 3 1 1 285 10 39641997 39643562 TTGGTGTTGTGGATACAGG 59 39641730 39641749 ACATAGGTGCTGATAGAAGC 59 NA DesignNoJunction Mus musculus 50 Asb6 ENSMUSG00000039483 ENSMUST00000041726 1 1 1 123 2 30682535 30682553 CTCCATTCTACCAGGAAGG 58 30681269 30682448 TAGGTAACAGGGTCTTCGA 59 NA Mus musculus 50 Stau1 ENSMUSG00000039536 ENSMUST00000109235,ENSMUST00000109238,ENSMUST00000109236,ENSMUST00000088055,ENSMUST00000049412 3 5 5 81 2 166776822 166776840 GTAAAGAAACCAGGAGACG 57 166776589 166776777 CGTCCTTGTTACTAGTTCC 57 NA Mus musculus 50 2900083I11Rik ENSMUSG00000039860 ENSMUST00000111157 3 1 2 152 5 136316267 136316285 AGATGCTGATGGAGAAGGA 59 136316401 136316419 TCTAATGGTGCATTGGGAC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Thbs1 ENSMUSG00000040152 ENSMUST00000039559 3 1 1 84 2 117944869 117944887 ATGGTAGCTGGAAATGTGG 59 117944935 117945068 ACTTCTTTGCACTCATCGA 59 NA Mus musculus 50 Ccdc114 ENSMUSG00000040189 ENSMUST00000098446 1 1 2 78 7 53179929 53179947 GAAGGAAGCGAGATCTTCC 59 53183923 53183941 ACTCCATCATCTTGCACTG 59 NA DesignNoJunction Mus musculus 50 Os9 ENSMUSG00000040462 ENSMUST00000080975 2 1 1 81 10 126535172 126535409 CATCATCCAGGAGACAGAG 58 126535109 126535127 TAGAGCCAATATTGCCTGC 59 NA Mus musculus 50 Ggt6 ENSMUSG00000040471 ENSMUST00000100903 1 1 3 282 11 72249235 72249253 CTCTCCCTAAGGAGACTCC 59 72250670 72250688 TTGAGTTTCCTGAAGAGCT 58 NA DesignNoJunction Mus musculus 50 Apobec1 ENSMUSG00000040613 ENSMUST00000112586,ENSMUST00000112587,ENSMUST00000112585 2 3 3 86 6 122531756 122538170 ACTCTGAGGAGAAGAATTGAG 58 122531690 122531708 CTCATACAGCAGACAGGTC 59 NA Mus musculus 50 Lat2 ENSMUSG00000040751 ENSMUST00000036362,ENSMUST00000077636 1 2 2 88 5 135079340 135080623 CTCAGAAGACGACGATTCC 59 135079020 135079038 AATCCTCAAAGTCCTCGAC 58 NA Mus musculus 50 8430410K20Rik ENSMUSG00000041124 ENSMUST00000047173 2 1 1 133 9 4384130 4384744 TCAGAGCCCAGAATTTGAG 59 4384841 4384859 TGGATGGTGTGGAATTGAG 59 NA Mus musculus 50 Pcf11 ENSMUSG00000041328 ENSMUST00000040360 1 1 2 80 7 99801749 99805825 CTCAACAGGTTCTTACTGG 57 99801687 99801705 GATTCTGTGGATGAACTGG 57 NA Mus musculus 50 Bivm ENSMUSG00000041684 ENSMUST00000035991,ENSMUST00000114709 1 2 2 81 1 44185601 44185619 ACTTCATGTGGTATCTCCT 57 44185664 44186118 TAATAGGTGGGAGATTCCC 57 NA Mus musculus 50 Oosp1 ENSMUSG00000041857 ENSMUST00000048214 2 1 2 81 19 11742896 11761833 TATGCACAATCAGAGTCCTC 59 11742834 11742852 ATCTTCTGTCCATCCAGGA 59 NA Mus musculus 50 Rassf4 ENSMUSG00000042129 ENSMUST00000035842 1 1 1 80 6 116609609 116611872 GTACATTCTGAAGTCAGAACTC 58 116609550 116609568 TGTCTTAGCTGAAAGCTCC 59 NA Mus musculus 50 Pbrm1 ENSMUSG00000042323 ENSMUST00000112098,ENSMUST00000112089,ENSMUST00000112088,ENSMUST00000090214 2 4 11 242 14 31920483 31923605 AGCAGAATATGAAGAGCGG 59 31927080 31927098 CTAACAAGGCCATCAACTG 58 NA DesignRelaxed Mus musculus 50 Wdr55 ENSMUSG00000042660 ENSMUST00000049323 2 1 1 127 18 36922404 36922515 TCATGAAATACGGGAAGAAGG 59 36922604 36922622 AACTATGCAGTCGATGGAC 59 NA Mus musculus 50 Ptgir ENSMUSG00000043017 ENSMUST00000086101 3 1 2 285 7 17492245 17492872 TACGTTCAAGACTCGAGAC 58 17494203 17494221 AACACAACCAGAACTTGAG 57 NA DesignNoJunction Mus musculus 50 Leng9 ENSMUSG00000043432 ENSMUST00000058358 1 1 1 60 7 4100258 4100276 TTCTTGTGCTGAGTTCCTG 59 4100216 4100234 CCTTAGCAAGACCACTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700007I06Rik ENSMUSG00000044056 ENSMUST00000054327,ENSMUST00000109377 1 2 2 60 11 32424400 32424419 GTTGATTTGCATACTGCTGG 59 32423670 32423688 ATGGCGGTACATAAAGTGG 59 NA DesignNoJunction Mus musculus 50 Slc16a13 ENSMUSG00000044367 ENSMUST00000060010,ENSMUST00000108581 1 2 2 95 11 70031416 70032105 TCCTCTATCAGGCTACCTC 59 70031339 70031357 AGAAGAACTCCACTTCCTG 58 NA Nonspecific Mus musculus 50 Zfp758 ENSMUSG00000044501 ENSMUST00000088765,ENSMUST00000072477 2 2 3 274 17 22498674 22510629 GGGTCTGTTAACATTCAAGGA 59 22511883 22511901 AAGGTGTACTTTGACTGGA 58 NA DesignNoJunction Mus musculus 50 BC023882 ENSMUSG00000045102 ENSMUST00000101332 3 1 3 60 5 34446572 34446590 ATCAGACTGGAACTGTGAC 58 34446530 34446548 AATGGGCAAGAACTTACTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Igfals ENSMUSG00000046070 ENSMUST00000050714 1 1 1 60 17 25017866 25017886 TTAGGTGAGAAGACGTTTGAG 59 25017908 25017926 GATTGTCATTGAGCGTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp62 ENSMUSG00000046311 ENSMUST00000109198,ENSMUST00000109195,ENSMUST00000109197,ENSMUST00000061757 3 4 4 60 11 49029867 49029888 GGAGAAAGACCTTATGTATGTG 58 49029909 49029927 TGAGACCTGAATTGTTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Prr12 ENSMUSG00000046574 ENSMUST00000057293 1 1 1 80 7 52286423 52286441 GAGCTATGTGGAGATGCTG 59 52286069 52286380 TAGAGTTCATCATGCGTGTC 59 NA Mus musculus 50 Zfp316 ENSMUSG00000046658 ENSMUST00000051665 2 1 1 106 5 144025052 144025070 ACTTCTCTTTGGAGGAGTG 58 144024575 144024982 GATTGGGTATCCCAAGGAG 59 NA Mus musculus 50 Gprc5a ENSMUSG00000046733 ENSMUST00000050104 2 1 1 106 6 135029407 135029426 ATTACCCAGTTGAAGATGCT 59 135029495 135033471 CATCTCAAGACCTTGGGTG 59 NA Mus musculus 50 Gpr6 ENSMUSG00000046922 ENSMUST00000061796 2 1 1 60 10 40790447 40790465 CCATCTACACTTATGCCAC 57 40790405 40790424 ATGATGGGATTGATCATGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nqo2 ENSMUSG00000046949 ENSMUST00000110268,ENSMUST00000021843,ENSMUST00000058978 2 3 3 80 13 34064333 34071406 AATGATATCACTGGTGCCC 59 34071450 34071468 AGCTTTCTTCTTGTAGGCT 58 NA Mus musculus 50 Arhgap30 ENSMUSG00000048865 ENSMUST00000111282,ENSMUST00000056449 1 2 2 80 1 173332328 173332346 TCATTTAGTGCCCAAACCA 59 173332389 173333356 TATGTCCTTAGACCTCAGCA 59 NA Mus musculus 50 Gpr137c ENSMUSG00000049092 ENSMUST00000100682,ENSMUST00000050518 3 2 2 87 14 45898447 45898611 TAAACCAGAATCTGGCACC 59 45898661 45898680 TCATACCGTCTTGGATTGTC 59 NA Mus musculus 50 Smcr8 ENSMUSG00000049323 ENSMUST00000056907 3 1 2 69 11 60593816 60593834 AAGCACTGGATTTCTTCCC 59 60593866 60597257 CTCTTTGTAGGCCAATAAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rd3 ENSMUSG00000049353 ENSMUST00000053463 3 1 1 145 1 193807395 193807413 TGTATGTGCCAAGATCCAC 59 193809172 193809190 CCTGCTTCATCTTCTCCAG 59 NA DesignNoJunction Mus musculus 50 Slc36a3 ENSMUSG00000049491 ENSMUST00000069816,ENSMUST00000108877 2 2 3 144 11 54964784 54964803 TAGAGAAGTTGGCAAGTGTC 59 54963443 54964677 CCATAGGGCTTCCATTAGC 59 NA Mus musculus 50 4930429B21Rik ENSMUSG00000049507 ENSMUST00000057768 1 1 1 68 3 32265027 32265045 ACTTGTATAGTGGCTAGGG 57 32265077 32265095 TACTCTGCCGGTAATATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 4930401F20Rik ENSMUSG00000049952 ENSMUST00000108580,ENSMUST00000068750 2 2 2 97 7 4721910 4721930 GCCTAAATTATCCAAGACACC 58 4711629 4721851 GAGACTGGACCTGAAAGTG 59 NA Mus musculus 50 Gm867 ENSMUSG00000050157 ENSMUST00000059658 2 1 1 84 10 75402522 75402540 AGAAGAGGAGACCACTCAG 59 75402217 75402474 CTTTCCCTTCTGTACCAGG 59 NA Mus musculus 50 Apon ENSMUSG00000051716 ENSMUST00000060782,ENSMUST00000105239 1 2 2 60 10 127692061 127692079 CTGTAGTCAATGTCACCCA 58 127692100 127692121 GCTACTTCATTCATACTTTCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mettl5 ENSMUSG00000051730 ENSMUST00000060447 3 1 2 155 2 69717228 69718829 ATAAAGGGACAGATATGGCT 57 69709824 69711944 GATCATATCGAAGCTCTGC 57 NA Mus musculus 50 A530095I07Rik ENSMUSG00000051805 ENSMUST00000070942 2 1 1 62 13 69682525 69682543 AACTCAAGGCATAGGAGTG 58 69682481 69682499 CAGTGTTTAGGCAAACTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Q8K2L9-2 ENSMUSG00000052031 ENSMUST00000063683 1 1 1 183 17 7165127 7165382 ATCAAGGCTGAACTCAGAG 58 7161365 7162012 TTGACACGTCTGAACTGTC 59 NA Mus musculus 50 Pard3b ENSMUSG00000052062 ENSMUST00000075374,ENSMUST00000094906,ENSMUST00000063725,ENSMUST00000046673,ENSMUST00000046451 3 5 5 101 1 62276840 62285416 ATTTCAGTCACAGCTCTGG 59 62285481 62285499 GGTTAATCAATTCGGGCTG 58 NA Mus musculus 50 Uba2 ENSMUSG00000052997 ENSMUST00000065148,ENSMUST00000102746 3 2 2 85 7 34950472 34950490 TATCGATGTCAGCAACCTC 59 34949459 34950423 CACTTTCTTTGGCAACCTG 59 NA Mus musculus 50 Vps24 ENSMUSG00000053119 ENSMUST00000065364,ENSMUST00000059462 2 2 2 118 6 71502438 71510896 GACAGGCAAATAAGAGATATCC 58 71510975 71510993 GACCTGATCATCTCCTTGG 59 NA DesignRelaxed Mus musculus 50 NM_175284.3 ENSMUSG00000054709 ENSMUST00000067911 2 1 1 60 5 129107980 129107998 GCAGCTGTATGTTATCCAG 57 129108019 129108040 TACCAAGAAGACTAAGGTACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Actn4 ENSMUSG00000054808 ENSMUST00000068045 2 1 1 80 7 29690466 29692000 GGCCAGTGATCTTCTAGAG 58 29690404 29690423 ATTTCCTGGATGGTCTTCTG 59 NA Mus musculus 50 9130008F23Rik ENSMUSG00000054951 ENSMUST00000068258 1 1 1 60 17 41017339 41017357 AAGTGCCCAATCAATAGCA 59 41017297 41017316 GCAATCCAAATTCTTTCCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lrtm2 ENSMUSG00000055003 ENSMUST00000068351,ENSMUST00000112756 1 2 2 130 6 119267528 119270456 AGTGGTTCTCCTACAGAGG 59 119267416 119267434 GTTCTCATCCTCTAGCTGG 58 NA DesignNoJunction Mus musculus 50 Ifng ENSMUSG00000055170 ENSMUST00000068592 2 1 1 97 10 117879763 117879782 TAAGCGTCATTGAATCACAC 58 117879841 117882218 GTTGTTGACCTCAAACTTGG 59 NA Mus musculus 50 Pgbd1 ENSMUSG00000055313 ENSMUST00000068817,ENSMUST00000099719 2 2 2 94 13 21526245 21526263 TACTGGAGAATCTAGCCTC 57 21525361 21525379 ATACTCTGTCACCACTAGG 57 NA DesignNoJunction Mus musculus 50 Atp10b ENSMUSG00000055415 ENSMUST00000056678 1 1 2 167 11 42969624 42969642 GAATTTCATCCCTGTGGTC 58 42969772 42972107 ATTATCTTGCTGCTGTAGAC 57 NA InUTR Mus musculus 50 9830001H06Rik ENSMUSG00000055485 ENSMUST00000069098 2 1 1 81 2 156856308 156856326 GAGGAAGAGGAGATGAACG 59 156855374 156856263 ACTCATTAGGCGTGTTCTG 59 NA Mus musculus 50 Lair1 ENSMUSG00000055541 ENSMUST00000086401,ENSMUST00000068865,ENSMUST00000086400,ENSMUST00000108598 3 4 6 168 7 3962422 3962440 TGGCTAAAGACATACAGCA 58 3962089 3962196 TAGTAGCTAGATTTAGCCTCTC 58 NA Mus musculus 50 Lman1l ENSMUSG00000056271 ENSMUST00000093832 3 1 2 110 9 57456131 57456977 GGTCTGGTGAAGAAGACAG 59 57456039 57456057 TACAGTCTGGAGTAGGAGG 58 NA Mus musculus 50 Apol8 ENSMUSG00000056656 ENSMUST00000070911 2 1 1 133 15 77585651 77585669 ATCAAGAGGTCTACCATGC 58 77583339 77583676 AATGAAGGTTCTGTCTCCTG 59 NA InUTR Mus musculus 50 Acbd4 ENSMUSG00000056938 ENSMUST00000107040,ENSMUST00000074474,ENSMUST00000092558 3 3 6 134 11 102964950 102965416 CTAAGAATGGGATGCCTGG 59 102965774 102965792 CAAACATATCCTCTGCCAC 58 NA DesignNoJunction Mus musculus 50 Magel2 ENSMUSG00000056972 ENSMUST00000080403 3 1 1 60 7 69525547 69525566 CTTTGGTTGTCAACTGAAGG 59 69525586 69525607 CTTGTTGACGATGATGTAAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr787 ENSMUSG00000057617 ENSMUST00000077836 3 1 1 60 10 128899748 128899767 TGTGATTACTGAGTTTGTGC 58 128899789 128899808 AATCACAACCTGGACTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr822 ENSMUSG00000058251 ENSMUST00000080460 1 1 1 60 10 129511774 129511792 TTCCTTCTTGGAGCATCAG 59 129511811 129511834 CTACATATCTGTCATAGGACATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hist1h2bg ENSMUSG00000058385 ENSMUST00000079251,ENSMUST00000110430 1 2 2 182 13 23663484 23663502 CATCATGAACTCGTTCGTG 58 23663648 23663666 TACTTAGTGACAGCCTTGG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Olfr490 ENSMUSG00000058510 ENSMUST00000074550 3 1 1 60 7 115430229 115430247 ACCCATTGCTTTATTCCAC 57 115430187 115430206 GATCCTACAATCAACTGGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp637 ENSMUSG00000059689 ENSMUST00000112861 1 1 3 123 6 117792125 117793281 GAGTTCAGGTTCTCCAGAC 59 117793368 117793386 ATCTTCCATGACAGTCCAG 58 NA InUTR Mus musculus 50 9430015G10Rik ENSMUSG00000059939 ENSMUST00000072554,ENSMUST00000105576 3 2 2 127 4 155497717 155497736 TGGATTCTTCTACCTCAAGC 59 155498222 155499534 GCTTCCTCACTGAAGACTG 59 NA Mus musculus 50 Mcpt4 ENSMUSG00000061068 ENSMUST00000043249 1 1 1 103 14 56679409 56679427 TCATGGATAAAGAGGCCTG 58 56678929 56679342 AGAGTCTCCCTTGTATGCT 59 NA Mus musculus 50 Rai1 ENSMUSG00000062115 ENSMUST00000064190,ENSMUST00000090806,ENSMUST00000102688 2 3 4 66 11 59999331 59999349 CATGATAGGCCGATGAGTG 59 59999379 59999397 AAGCGTGAAGATTCTGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG13909 ENSMUSG00000062181 ENSMUST00000074403,ENSMUST00000093221 3 2 2 84 8 107610597 107610725 ATTGTCTCATCCCTGTTCC 58 107610773 107610791 TAATGGTCGTGACAATCCC 59 NA Mus musculus 50 Btnl1 ENSMUSG00000062638 ENSMUST00000080254,ENSMUST00000114181 1 2 2 101 17 34518451 34518469 TGCTTCTGTTGAAGAAGGG 59 34519200 34519415 TCTTCCAGTCTTCTTTGTACAG 59 NA Mus musculus 50 Manbal ENSMUSG00000063019 ENSMUST00000081202 2 1 1 132 2 157204956 157204974 CCATCATCGTACCCATTCC 59 157221725 157221743 TTCTTCGTCTCCTTCTTCG 59 NA DesignNoJunction Mus musculus 50 Klk1b8 ENSMUSG00000063089 ENSMUST00000072204 3 1 1 91 7 51208139 51208159 GTGTATGACAACAAGGAACAC 59 51208212 51209229 TCATACTGGTCGACATAGC 58 NA Mus musculus 50 Olfr107 ENSMUSG00000063188 ENSMUST00000077008 1 1 1 60 17 37542496 37542516 TGAACTGTAGTAAGACTCCTG 58 37542538 37542556 CATTTCTCTGGGTCACTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr930 ENSMUSG00000063221 ENSMUST00000076883,ENSMUST00000104874 2 2 2 60 9 38738094 38738112 TACCTCCTGACTGTTATGG 57 38738136 38738154 TATACAGCAATGGTCTGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr282 ENSMUSG00000063780 ENSMUST00000075851 1 1 1 60 15 98268416 98268434 AAACCATTCACCACTACAC 57 98268458 98268476 ATATCGGAACAGGACAAGG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Crem ENSMUSG00000063889 ENSMUST00000073545,ENSMUST00000082141,ENSMUST00000115873 2 3 6 90 18 3325418 3325436 AGTGTAACACGTTCTGTGG 59 3295402 3325364 CAATTGTTGCTACCTGAGC 59 NA Mus musculus 50 Zfp192 ENSMUSG00000063894 ENSMUST00000110482,ENSMUST00000045228,ENSMUST00000110481 2 3 3 60 13 21618776 21618794 CAAGAAAGCCTTCTTCAGC 59 21618734 21618753 ATGACAAGATCCTCTTCAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-340 ENSMUSG00000065417 ENSMUST00000083483 1 1 1 60 11 49883227 49883246 AAGCAATGAGACTGATTGTC 58 49883266 49883287 TGGCTATAAAGTAACTGAGACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rdh11 ENSMUSG00000066441 ENSMUST00000085254 3 1 1 86 12 80283824 80286123 AAGAGGCTGAAAGGTTCTG 59 80283756 80283775 CATAATAGAGGAGTACCGCG 59 NA Mus musculus 50 NP_001074874.1 ENSMUSG00000066820 ENSMUST00000086297 1 1 1 80 7 5442108 5442126 TTACAGGACCCGATATGAC 58 5440347 5442065 TAAGCTGAAGGAAATGTGGA 58 NA Mus musculus 50 Gpr113 ENSMUSG00000067642 ENSMUST00000088117,ENSMUST00000114774 1 2 2 80 5 30529542 30529560 GATTCCTGTATGTGTCGCA 59 30528981 30529499 TATCAGGTTTGCAGGAACAG 59 NA Mus musculus 50 Mas1 ENSMUSG00000068037 ENSMUST00000089015 2 1 1 87 17 13039275 13040957 CAGCTACTTCTCAAGGAGG 59 13039206 13039224 GTCAGTTAGTCAGTGGCTC 59 NA InUTR Mus musculus 50 Olfr458 ENSMUSG00000068574 ENSMUST00000090156 3 1 1 62 6 42410293 42410311 AAAGCCTTTGGTACTTGTG 58 42410249 42410267 GAGGGCCATTCCATAAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Csde1 ENSMUSG00000068823 ENSMUST00000071942,ENSMUST00000029446 3 2 2 83 3 102850840 102850947 GTGGTTCCTGATATGCTCTC 59 102850993 102851011 GGAATGGAATGAAACCGTG 59 NA Mus musculus 50 Hsf5 ENSMUSG00000070345 ENSMUST00000093956 3 1 1 81 11 87449568 87449587 AAATCATAACCCATCTCCGT 58 87449631 87451586 TATACTGCTATCCACCTGC 58 NA Mus musculus 50 BC094916 ENSMUSG00000070501 ENSMUST00000097463 3 1 2 117 1 175456680 175456699 ACTCCAACAAGATCATCCAG 59 175451778 175456600 TAGCTTTGATGACCTTGGC 59 NA Mus musculus 50 OTTMUSG00000008561 ENSMUSG00000070867 ENSMUST00000094894 1 1 1 85 4 114252973 114252991 AGAGGACCTCATCAAACAC 58 114253040 114259078 TGATGAAGTTGGGTAGCTG 59 NA Mus musculus 50 Cryge ENSMUSG00000070870 ENSMUST00000087359 1 1 1 60 1 65097368 65097386 GGGTTTCAGTGACTCTGTC 59 65095453 65097344 GATCCTGTGAGAACTGGAG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 NP_996891.1 ENSMUSG00000071066 ENSMUST00000072976 1 1 1 74 10 128623652 128623670 AGGGTGTGATGATTCTCAC 58 128623596 128623615 CTTGCCTATTCCTAAGTGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 9230019H11Rik ENSMUSG00000071434 ENSMUST00000095874 2 1 1 91 10 7218940 7219969 AATGACAGGGTGAAGATGC 59 7218867 7218886 TGATGAGTCATGTGTTGAGG 59 NA InUTR Mus musculus 50 Rhox4b ENSMUSG00000071771 ENSMUST00000096458 2 1 1 60 X 34850229 34851556 GCCAGAGTTATGACATGGT 59 34851579 34851598 ACTGACTTTGTCCTCTTCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Apcdd1 ENSMUSG00000071847 ENSMUST00000096554 3 1 1 119 18 63093608 63093627 TTTCAAGGAGTCACAGTGTC 59 63093709 63096574 GACCTTACTTCACAGCCTG 59 NA Mus musculus 50 ENSMUSG00000072589 ENSMUSG00000072589 ENSMUST00000100671 3 1 1 61 14 47718167 47718186 TCTGGGATAAAGATGATGCG 59 47718125 47718143 AAAGCTCCTGTGATGTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC050254 ENSMUSG00000073147 ENSMUST00000101522 1 1 1 189 5 22939122 22939140 GAGTGAGAAGTGATGACGG 59 22938951 22938969 AAGTCACAGGAGAAATTGC 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 6330534C20Rik ENSMUSG00000073207 ENSMUST00000101588 1 1 1 60 X 50151910 50151929 AAACTTAACTGAAGAGCTCC 57 50151952 50151970 GTTCTCTAGGCTCAACCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073534 ENSMUSG00000073534 ENSMUST00000097524 1 1 1 93 18 75678575 75679265 TGTTACCATACACAGCAGG 59 75679322 75679340 ACGAGGGTTATTGCTAGAG 58 NA DesignNoJunction, InUTR Mus musculus 50 Vps13d ENSMUSG00000073719 ENSMUST00000097796 3 1 1 60 4 144562848 144562866 GACATTTGAAGCCACTCTG 58 144562806 144562824 AAAGGATGCTCTCCTTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 6430531B16Rik ENSMUSG00000073795 ENSMUST00000097970 3 1 1 85 7 147162563 147162979 GGTACAGCTGATCCAAGAC 59 147162496 147162515 TGCATCTTAGAGGTATGTGG 58 NA Mus musculus 50 Olfr692 ENSMUSG00000073906 ENSMUST00000098152 3 1 1 60 7 112516844 112516862 GAGACCCAAACTTCATCCT 58 112516884 112516904 TTGGAAGGTAGAATTGGACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr656 ENSMUSG00000073924 ENSMUST00000098172 1 1 1 60 7 111767026 111767045 TTGGCTAATGTCTATCTGCT 58 111767066 111767086 TCTTGACTCCATATACCACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cmtm2a ENSMUSG00000074127 ENSMUST00000109450 1 1 2 269 8 106816696 106816815 TTCAAGCTTCTGTCTTTGG 57 106815108 106815126 TCTGCTTTCAAAGGTTCTC 57 NA DesignNoJunction Mus musculus 50 4930449A18Rik ENSMUSG00000074589 ENSMUST00000094228 1 1 1 63 3 59642342 59642360 ATTTGTGAGAATGCAGCTG 58 59642387 59642405 GTCTGTGTCAATCACTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074776 ENSMUSG00000074776 ENSMUST00000099324 2 1 1 80 10 97145287 97215152 TCAGACATAAGCTGTTGGT 58 97145225 97145245 GCATCTGTATTCATCTCTGTC 58 NA InUTR Mus musculus 50 6430553K19Rik ENSMUSG00000075042 ENSMUST00000099718 1 1 1 82 16 48131391 48141403 CTTTAAAGACGGAAGAATGCTG 59 48131330 48131348 GTTTGGCTGTAGGTCTCTG 59 NA Mus musculus 50 Olfr1136 ENSMUSG00000075151 ENSMUST00000099852 1 1 1 60 2 87533815 87533833 TCTGATCTCTGCTACTCCA 58 87533773 87533794 TATCTTCAAGGAGGTCTAAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1043 ENSMUSG00000075201 ENSMUST00000099907 2 1 1 60 2 86002700 86002720 CCTTTGCTCTATGTCATTCTC 58 86002660 86002678 ACGTGGTAATGGCTATCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fsip2 ENSMUSG00000075248 ENSMUST00000099963 3 1 1 86 2 82841746 82841764 TTTCTACCAGATGCAAAGG 57 82845394 82847639 AGTGACAAACTCAAGACTG 57 NA Mus musculus 50 4930594M22Rik ENSMUSG00000075463 ENSMUST00000100291 2 1 1 60 14 123325517 123325538 CTCCCAGATACCAGTTATATCC 58 123325559 123325577 GAAGTTAGTGTTGCTTTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRBV3 ENSMUSG00000076463 ENSMUST00000103264 2 1 1 60 6 40998424 40998527 TTAGTTTCTTGGAAGCAGGA 58 40998549 40998568 ATTTGATGACTTGGGATCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV14-111 ENSMUSG00000076509 ENSMUST00000103310 3 1 1 176 6 67846219 67846352 TTTCCAGGTATCAGATGTGAC 59 67846487 67846508 GCTTGTTGCATAATAGATCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-23 ENSMUSG00000076699 ENSMUST00000103508 3 1 1 85 12 116002846 116002865 TGACTATGAAATGCACTGTG 58 116002780 116002798 CAGTACCACAAGTTTCAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-69 ENSMUSG00000076730 ENSMUST00000103539 1 1 1 243 12 116861672 116861774 ATCAACAGCTACAGGTGTC 59 116861447 116861465 GTCTACAGTCAATGTGGAC 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 IGHV8-9 ENSMUSG00000076733 ENSMUST00000103542 1 1 1 60 12 117003658 117003676 TGACAAGCACTATAACCCA 58 117003616 117003634 GTTGGAGGTATCCTTGGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRAV7-4 ENSMUSG00000076830 ENSMUST00000103642 1 1 2 96 14 54081019 54081131 TAATCTCTAGCGTGAGGAG 57 54081191 54081209 CTTGAAGTGCAGTTGAGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A2A4M7_MOUSE ENSMUSG00000078256 ENSMUST00000105053 3 1 1 99 11 99776073 99776092 AATATCACCCTCTACTCCTG 57 99776154 99776172 AGAGTTGGATTCAGAGCTG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 4921509A18Rik ENSMUSG00000078315 ENSMUST00000105110 2 1 1 60 X 75984318 75984337 TGGAGAAGTTGTTTATGAGG 57 75984359 75984378 CTTGGTATTGGAGTGTTGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ctdsp2 ENSMUSG00000078429 ENSMUST00000105256,ENSMUST00000105255 1 2 2 60 10 126433238 126433256 GCATCTTACATCTTCCACC 57 126433429 126433447 CCATGTCATCAAACCAGGA 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Col6a1 ENSMUSG00000078445 ENSMUST00000105412 3 1 1 60 10 76173717 76173735 GAAGAACATAACAGCCCAG 58 76172925 76173108 GATTGGACAGGTATAATCCG 57 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 NP_001078981.1 ENSMUSG00000078605 ENSMUST00000106710 3 1 1 153 11 109001372 109001390 CCACAGTCACAGAAGAAGG 59 109000879 109000898 CTGAAGAAAGGGTACTTCCA 58 NA DesignNoJunction Mus musculus 50 Aoc2 ENSMUSG00000078651 ENSMUST00000041095,ENSMUST00000107264 3 2 2 112 11 101189816 101189834 CTTTACCTGGCTACCAACC 59 101190182 101190201 TTCTGGTAATAGATGCTGCT 58 NA DesignNoJunction Mus musculus 50 Casc3 ENSMUSG00000078676 ENSMUST00000017384 1 1 1 80 11 98683784 98683805 TATGGTTATGACATTCGGTCTG 59 98683846 98684046 GGAACTTCCAAATCGAGGT 59 NA Mus musculus 50 A2APU9_MOUSE ENSMUSG00000078747 ENSMUST00000108028 1 1 2 199 4 41812352 41812764 ATAGAATGCGAAGGAACCG 59 41813252 41813270 GACAAACAGCTCATTAGGC 58 NA Nonspecific, DesignNoJunction Mus musculus 50 A2APU9_MOUSE ENSMUSG00000078747 ENSMUST00000108028 2 1 2 60 4 41812348 41812760 ACACATAGAATGCGAAGGA 58 41812784 41812802 CTCGTATCTCCTCAATCGC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A2BHX7_MOUSE ENSMUSG00000078876 ENSMUST00000108978 1 1 1 60 2 176619675 176619695 AAAGATGTGATGCTAGAGACC 59 176619717 176619928 GTTCTTCCCAAATGTACCC 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 5830418K08Rik ENSMUSG00000079706 ENSMUST00000065229 2 1 1 100 9 15159116 15159134 TACAAAGCTGAGATTGAGC 57 15157528 15159052 TTTCTTGTTCTCGAACCTG 57 NA Mus musculus 50 Spg7 ENSMUSG00000000738 ENSMUST00000108868 3 1 2 119 8 125589604 125590385 CCTCAGAGTTTGCTATTGC 58 125590468 125594286 CAAAGTGCTACCTGAAAGC 59 NA Mus musculus 50 Il12rb1 ENSMUSG00000000791 ENSMUST00000000808,ENSMUST00000093452 3 2 2 93 8 73335120 73336383 TGTACAACTGGACCAAGAC 59 73336439 73336458 TCTTCAGACACATTCCAGTC 59 NA Mus musculus 50 Usp32 ENSMUSG00000000804 ENSMUST00000108075 3 1 2 143 11 84917513 84953216 AGAGTTACAGATGTTGAGCT 58 84897385 84917407 ACAGTAAATCACCTCAGCA 58 NA Mus musculus 50 Mef2d ENSMUSG00000001419 ENSMUST00000107558 3 1 3 184 3 87962266 87963050 TATAGACTGGCCTCATCTG 57 87963198 87963216 CTGTTTCTCTGTAGTGCTG 57 NA Mus musculus 50 Mef2d ENSMUSG00000001419 ENSMUST00000107559 1 1 3 89 3 87965716 87966891 TAGATCTGAACAATGCCCAG 59 87966943 87966961 GTAAACTTGGTGTTGCCAC 59 NA Mus musculus 50 Def8 ENSMUSG00000001482 ENSMUST00000108832 1 1 6 181 8 125970084 125971235 GGGAACATCTCAAGTAAGGG 59 125971802 125973209 GCAAAGTGTCTTCAGAAGTG 59 NA Mus musculus 50 Trmt1 ENSMUSG00000001909 ENSMUST00000001974,ENSMUST00000109766,ENSMUST00000109767,ENSMUST00000109768 1 4 4 80 8 87219228 87219336 GTGATGGAGGACTTCTGTG 59 87219380 87219398 ACTTGCTGTAGCATGTCTC 59 NA Mus musculus 50 Map2k7 ENSMUSG00000002948 ENSMUST00000062686,ENSMUST00000110999,ENSMUST00000110998,ENSMUST00000052385,ENSMUST00000003027,ENSMUST00000110995,ENSMUST00000110994,ENSMUST00000110996 2 8 8 80 8 4244003 4244022 TGGATGTAGTACTCAAGAGC 58 4244065 4244241 TAAAGACGTCTGTGTTGGT 58 NA Mus musculus 50 Cacna1b ENSMUSG00000004113 ENSMUST00000102939,ENSMUST00000070864 2 2 7 80 2 24504042 24504061 AACGTCTTTGACTTTGTCAC 58 24494719 24504000 GATGAAGTTGTTCGTTTCCG 59 NA Mus musculus 50 Zfp287 ENSMUSG00000005267 ENSMUST00000108706,ENSMUST00000005399 3 2 4 108 11 62528868 62538307 CTAATCCAGAATGGGAACCT 58 62528779 62528798 TCGTCATAGGAATCTTCCAG 58 NA Mus musculus 50 BC003331 ENSMUSG00000006010 ENSMUST00000111913,ENSMUST00000006167,ENSMUST00000094477 1 3 4 92 1 152229459 152229477 TAGACTGTACTGTTCACGT 57 152228712 152229404 GTGTAAGTCCACTCTTTGTG 58 NA Nonspecific Mus musculus 50 Elovl1 ENSMUSG00000006390 ENSMUST00000006557,ENSMUST00000102673,ENSMUST00000067896 1 3 3 153 4 118103160 118103685 GTTTCTGATGTCTGGTTGG 58 118103921 118104028 GAGGATAAATATCACTGTGTCC 58 NA Mus musculus 50 Med8 ENSMUSG00000006392 ENSMUST00000084319,ENSMUST00000073881,ENSMUST00000019229,ENSMUST00000106384 2 4 4 97 4 118084323 118084342 CTTAAAGCATGAGAAGACGC 59 118084402 118084969 CTTCAGTTTGACGCATGAG 59 NA Mus musculus 50 Hfe ENSMUSG00000006611 ENSMUST00000091706,ENSMUST00000091707,ENSMUST00000095678,ENSMUST00000006787 2 4 4 85 13 23797519 23797538 TTGGTTGGAATTCTGTTCCT 59 23796256 23796275 CACTCACAGTCTGTTAAGAC 57 NA DesignNoJunction Mus musculus 50 Mc5r ENSMUSG00000007480 ENSMUST00000007624 3 1 1 60 18 68497295 68497316 CGGTAAACAGAAGATTCAACTC 59 68497336 68497355 GGTAAGCATGATTCTTCACG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Arid1a ENSMUSG00000007880 ENSMUST00000105897,ENSMUST00000105896 1 2 3 90 4 133242230 133242341 CAGCAACAACATGATTCCT 58 133242158 133242176 GATACATTGTGGTCTGCTG 58 NA Mus musculus 50 Tle1 ENSMUSG00000008305 ENSMUST00000072695,ENSMUST00000102848,ENSMUST00000107347,ENSMUST00000107350,ENSMUST00000107349,ENSMUST00000098010,ENSMUST00000074216,ENSMUST00000030095 3 8 10 122 4 71806436 71818497 GAGTAATTCCCTCTTGGTCC 59 71802904 71806354 CCATCACTGTCATAGTTATCCT 59 NA Mus musculus 50 2310007L24Rik ENSMUSG00000009210 ENSMUST00000009354,ENSMUST00000106816 1 2 2 244 11 106237624 106237642 AGAGCCTTTGGTTTACCAC 59 106238001 106238215 CATAGTAGTCTGAAGCTGGA 58 NA DesignRelaxed Mus musculus 50 Evi5l ENSMUSG00000011832 ENSMUST00000086778 1 1 2 96 8 4200908 4201938 AGACCCTAGAGAAGGAGAG 58 4202965 4202985 CGTTTGATGACATAGTTCTCC 58 NA Mus musculus 50 Dhdds ENSMUSG00000012117 ENSMUST00000012262,ENSMUST00000105887,ENSMUST00000105889,ENSMUST00000105885 1 4 5 91 4 133548486 133550085 GGAAGAACAGGAGAAGCTG 59 133548413 133548431 CAATCTTCTCCTGGAGGTC 59 NA Mus musculus 50 Ehmt2 ENSMUSG00000013787 ENSMUST00000114033,ENSMUST00000078061,ENSMUST00000114028,ENSMUST00000013931,ENSMUST00000097342 1 5 5 82 17 35049398 35049585 GATTTAGATAACAAGGATGGCG 59 35049627 35049646 CACAGGTGGTTAATGAATCG 58 NA Mus musculus 50 Tmem27 ENSMUSG00000015401 ENSMUST00000112280,ENSMUST00000015545 2 2 3 98 X 160546365 160546386 CTGGATTATTGTATTCGGTGTG 59 160546445 160556139 CCTTTGTTGTTCCTTCTGC 59 NA Mus musculus 50 Ppfibp1 ENSMUSG00000016487 ENSMUST00000016631 2 1 2 81 6 146946732 146946750 GTGAAGTAAAGAGGCTGCA 59 146946794 146949472 ACTTCAATGTCTCGATCGAG 59 NA Mus musculus 50 Pscd1 ENSMUSG00000017132 ENSMUST00000100181,ENSMUST00000017276,ENSMUST00000106305,ENSMUST00000106304,ENSMUST00000106302 3 5 5 122 11 118053766 118054937 GACATCCAGAGGCTAAAGG 59 118047092 118047111 AAATTTCTTTCTGCCCATGG 59 NA Mus musculus 50 Tnfaip1 ENSMUSG00000017615 ENSMUST00000017759,ENSMUST00000108277,ENSMUST00000100752 2 3 3 68 11 78341031 78341049 CACAGAGAAGAAGCAGACC 59 78338997 78339015 AGGACATTGAGTGTTTCCT 58 NA DesignNoJunction Mus musculus 50 Gdap1l1 ENSMUSG00000017943 ENSMUST00000018087,ENSMUST00000109421,ENSMUST00000109420 2 3 3 124 2 163276391 163277246 AAGCTTATGGCCAAGATCC 59 163277334 163279320 CCCTCATTCTCCAGTTTCC 59 NA Mus musculus 50 Atp2b1 ENSMUSG00000019943 ENSMUST00000020107 1 1 2 83 10 98472854 98472872 GACAAGATTTGGCCAAAGC 59 98472916 98473321 GCTGTCAATTATACCTTTCACC 59 NA Mus musculus 50 Tmpo ENSMUSG00000019961 ENSMUST00000099355 3 1 6 95 10 90621560 90621578 AGCTGAAGCTTGAGAAGAG 59 90615474 90621501 TATTGGCCACCTGATTGTG 59 NA Mus musculus 50 Igf1 ENSMUSG00000020053 ENSMUST00000095360,ENSMUST00000105300,ENSMUST00000075330,ENSMUST00000062862 2 4 4 112 10 87327624 87376373 TTTACTTCAACAAGCCCAC 58 87376449 87376467 GTACATCTCCAGTCTCCTC 58 NA Mus musculus 50 Ccar1 ENSMUSG00000020074 ENSMUST00000020268 1 1 2 81 10 62226236 62226257 GGATGATGGTGAAGTTAAAGAG 58 62223016 62226197 GAGATCATTTACCTTCATTGCC 59 NA Mus musculus 50 Usp15 ENSMUSG00000020124 ENSMUST00000020334 3 1 3 140 10 122590180 122600663 TCCCTCTACTCCTAAGTCC 58 122583956 122583974 GCAGTATATGACGGGAGAC 59 NA Mus musculus 50 Tnip1 ENSMUSG00000020400 ENSMUST00000102731,ENSMUST00000108886,ENSMUST00000018482,ENSMUST00000102730,ENSMUST00000108885,ENSMUST00000108889,ENSMUST00000093101 2 7 8 113 11 54734387 54737614 ATAGAGATGGAAGAGACCGA 59 54734293 54734311 GTATTCTCGTTGCCTTGTG 58 NA Mus musculus 50 Hormad2 ENSMUSG00000020419 ENSMUST00000109948,ENSMUST00000109949 2 2 4 125 11 4327344 4327363 CAAATGAGCATGAGTCACTG 59 4324814 4327256 AACTGAGGTCATCCAAACG 59 NA Mus musculus 50 Prkar1a ENSMUSG00000020612 ENSMUST00000106677,ENSMUST00000020932,ENSMUST00000049527 1 3 4 82 11 109523625 109524271 GGAGAAATGGATGTCTATGTC 57 109524315 109524333 TAAATCAAAGCCAGCTCTC 57 NA Mus musculus 50 Lig3 ENSMUSG00000020697 ENSMUST00000021039,ENSMUST00000092849,ENSMUST00000108174,ENSMUST00000080461 3 4 4 81 11 82610937 82611280 TGAAGATCAGCAAGGATCC 59 82611325 82611343 TCTGGGACGATAAAGTCAG 58 NA Mus musculus 50 Pecam1 ENSMUSG00000020717 ENSMUST00000106796,ENSMUST00000080853,ENSMUST00000103069,ENSMUST00000068021,ENSMUST00000106795 2 5 5 83 11 106545644 106546287 CTTGCAGTCAGAGTCTTCC 59 106545579 106545597 TATTAAGGTGGCGATGACC 59 NA Mus musculus 50 Srp68 ENSMUSG00000020780 ENSMUST00000021133 2 1 2 184 11 116133269 116133287 AGATCATTAAGGAGTCGCA 58 116126857 116129599 CAGCAAGTATCTGTTATCAGTC 58 NA Mus musculus 50 Exoc7 ENSMUSG00000020792 ENSMUST00000021147,ENSMUST00000106413,ENSMUST00000106411,ENSMUST00000106409,ENSMUST00000100205 2 5 6 95 11 116152833 116152851 CAAGTCCAAGGTGTACGAG 59 116152537 116152774 ATCAGCTCAGACTTCTCCA 59 NA Mus musculus 50 Cacna1g ENSMUSG00000020866 ENSMUST00000107793,ENSMUST00000107792,ENSMUST00000107791,ENSMUST00000107790,ENSMUST00000107789,ENSMUST00000107788,ENSMUST00000103166,ENSMUST00000100561,ENSMUST00000050636,ENSMUST00000080043,ENSMUST00000021234,ENSMUST00000107785,ENSMUST00000073986 2 13 14 80 11 94321187 94323221 ATTCTTCTCATCATCGTGGG 59 94321126 94321145 CTTGGTCTCAGAGAACTGTG 59 NA Mus musculus 50 Ubtf ENSMUSG00000020923 ENSMUST00000107123,ENSMUST00000079589 1 2 7 119 11 102171880 102172248 GAGTACGAGGAGATTATGCG 59 102171780 102171798 ATCGAACTTGTCCTTGAGC 59 NA Mus musculus 50 Esr2 ENSMUSG00000021055 ENSMUST00000110421,ENSMUST00000101291,ENSMUST00000076634,ENSMUST00000110419 2 4 6 85 12 77224305 77234806 CTCAACTCCAGTATGTACCC 59 77224239 77224257 GTCACTGCGTTCAATAGGT 59 NA Mus musculus 50 Tc2n ENSMUSG00000021187 ENSMUST00000095460,ENSMUST00000110047 3 2 2 87 12 102931380 102931398 GTAAACTTCCTGGTTCCTC 57 102928049 102931329 AATGAGTCATGTCTCTGGA 57 NA Mus musculus 50 Zkscan3 ENSMUSG00000021327 ENSMUST00000070785,ENSMUST00000116434,ENSMUST00000091757,ENSMUST00000116433,ENSMUST00000019612 2 5 5 91 13 21486688 21486707 CTCAGAAAGTAGCCAGATGG 59 21486439 21486634 CCACATGAGTGACTCTGAC 59 NA Mus musculus 50 Hmbox1 ENSMUSG00000021972 ENSMUST00000056878 2 1 3 177 14 65444519 65445616 CAATATCGCAGCAATCCTG 59 65444130 65444149 TTCTACCTTCTCTGCTTCTC 58 NA Mus musculus 50 Mipep ENSMUSG00000021993 ENSMUST00000063562 3 1 2 80 14 61494131 61522210 GCTTATGATTCAAGGCATGC 59 61522252 61522271 TCCAGATTCATGTCAGACAC 59 NA Mus musculus 50 Ephx2 ENSMUSG00000022040 ENSMUST00000070515,ENSMUST00000111128 3 2 2 80 14 66720444 66720462 TGAAAGGCTATGGAGACTC 58 66714537 66717647 ATGTCACCATCTCCTTACAC 59 NA Mus musculus 50 Acin1 ENSMUSG00000022185 ENSMUST00000022793,ENSMUST00000111485,ENSMUST00000022794,ENSMUST00000111484 1 4 5 81 14 55263567 55263585 GTACAGGAACTTTGGTGGA 59 55263376 55263524 TCCTCTACTGTAGAGTACGTC 59 NA Mus musculus 50 Csmd3 ENSMUSG00000022311 ENSMUST00000100670,ENSMUST00000022923,ENSMUST00000100669 2 3 4 80 15 48505000 48505019 CACTAGAAGAGGAGTACGAC 58 48453642 48504957 ATCCTGTTAACCTTGTCCT 57 NA Mus musculus 50 Csnk1e ENSMUSG00000022433 ENSMUST00000079284,ENSMUST00000100450 2 2 2 145 15 79256041 79256059 CTCATGTACTTCAACCTGG 57 79255403 79255932 TATGTTGAGAACTCGGAGG 58 NA Mus musculus 50 Crebbp ENSMUSG00000022521 ENSMUST00000080297 3 1 2 129 16 4094268 4094286 CCATATCGTACCAAAGCAC 58 4093569 4094175 AAGATATGTATACACGCCCT 57 NA Mus musculus 50 Kif21a ENSMUSG00000022629 ENSMUST00000109287 3 1 6 81 15 90786779 90786797 GACAAGTGGTACTTCTGCT 59 90774323 90786734 GATTATGCCTATGCTGCCT 59 NA Mus musculus 50 Dlg1 ENSMUSG00000022770 ENSMUST00000115205,ENSMUST00000115197,ENSMUST00000115201,ENSMUST00000064477,ENSMUST00000100001 2 5 8 81 16 31743284 31743303 CTCAGAGAAGAACCTGTCAG 59 31743347 31771851 TTCTGTGGGCTTTATTGGT 59 NA Mus musculus 50 Cd86 ENSMUSG00000022901 ENSMUST00000089620,ENSMUST00000023618 1 2 2 81 16 36621115 36629063 GATCTCAGATGCTGTTTCC 57 36621052 36621070 TTGAGCCTTTGTAAATGGG 57 NA Mus musculus 50 Tulp2 ENSMUSG00000023467 ENSMUST00000107759,ENSMUST00000107762,ENSMUST00000024233,ENSMUST00000085331,ENSMUST00000107761 2 5 5 127 7 52774250 52775113 GTAGCACATTTCCTTCTGG 58 52775203 52776118 ACATTGGATCTAACTTTGCC 58 NA Mus musculus 50 Rin1 ENSMUSG00000024883 ENSMUST00000025818 2 1 1 67 19 5051436 5051454 TCTCCAGCCACTATATCGA 59 5051574 5051592 CTGGAACATGAGCTCTGAG 59 NA DesignNoJunction Mus musculus 50 Saps3 ENSMUSG00000024908 ENSMUST00000113997 1 1 2 83 19 3478352 3484839 GTAGATCTAGTTACAACCTGCC 59 3478290 3478308 GGAATCCTGTGAGAAACCC 59 NA Mus musculus 50 Sectm1a ENSMUSG00000025165 ENSMUST00000100126 2 1 4 82 11 120930051 120930366 TCTTTACATCCTTCCCAGG 58 120929582 120930005 AACCACCTTACCTCAAGTC 58 NA InUTR Mus musculus 50 2410002I01Rik ENSMUSG00000025377 ENSMUST00000026442,ENSMUST00000093901,ENSMUST00000106225 3 3 3 124 11 119958276 119958833 AGAGATCGCCAAGATTTCC 59 119957967 119957988 GGTAAAGCAAGATCTTTAGCAC 59 NA Mus musculus 50 Scotin ENSMUSG00000025647 ENSMUST00000112059,ENSMUST00000026737,ENSMUST00000059097 3 3 3 63 9 108958579 108958598 TCTGTATAAGATGTGCTGCC 59 108958817 108958835 AACCACGGTAGTAGTTGTG 59 NA DesignNoJunction Mus musculus 50 Terf1 ENSMUSG00000025925 ENSMUST00000027057 3 1 2 85 1 15805984 15806003 GGAAATTGGCAGCTTTAAGG 59 15806051 15809030 ACTTCCTTTCTAAAGGCGT 58 NA Mus musculus 50 Cyb5r1 ENSMUSG00000026456 ENSMUST00000049223 3 1 2 81 1 136304210 136304228 GGATAGCCTGAAGATTGGG 59 136304273 136304404 ACATGCAGATTCTTTCCCA 59 NA Mus musculus 50 Dnm1 ENSMUSG00000026825 ENSMUST00000113350,ENSMUST00000113352,ENSMUST00000091089,ENSMUST00000113365,ENSMUST00000035664,ENSMUST00000002626 2 6 9 81 2 32190337 32191311 ATATCCATGGCATCAGAACG 59 32190275 32190293 CGAATCTTCTTCACCTGCT 59 NA Mus musculus 50 Inpp5e ENSMUSG00000026925 ENSMUST00000116559 2 1 3 81 2 26254129 26254148 CTGGGATCAAGACTTCAGAC 59 26252409 26254085 GGACAGTACTTGTCTCGTC 59 NA Mus musculus 50 Abca2 ENSMUSG00000026944 ENSMUST00000102919,ENSMUST00000114269,ENSMUST00000095124 1 3 3 80 2 25291945 25291963 AACATCTCCACAGAGATCC 58 25292006 25292117 AGCTACATACTGCTGTAACC 59 NA Mus musculus 50 Lrrc26 ENSMUSG00000026961 ENSMUST00000028337 2 1 1 70 2 25145590 25145608 GAGGATATTGGAACTGCCC 59 25145642 25145660 AGTGAACATGAACATGCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Atf2 ENSMUSG00000027104 ENSMUST00000055833,ENSMUST00000112017,ENSMUST00000112016,ENSMUST00000100009 3 4 10 91 2 73689035 73691865 TGTCATTGTGGCTGATCAG 59 73688962 73688980 CAAATGGACTTGCCAACTC 59 NA Mus musculus 50 Cops2 ENSMUSG00000027206 ENSMUST00000110463,ENSMUST00000110466,ENSMUST00000028635 1 3 4 82 2 125666106 125666126 CTCTATGAGCAATCACTTCAC 58 125665205 125666062 ATCTTACCACCGCATTCTC 59 NA Mus musculus 50 Gabpb1 ENSMUSG00000027361 ENSMUST00000110424,ENSMUST00000028839,ENSMUST00000103228,ENSMUST00000089741,ENSMUST00000103226 3 5 10 81 2 126472480 126475820 TTCTTCAGAAACTCCAGTAGTG 59 126472420 126472440 GCTAACTACTTGCTGAATTGC 59 NA Mus musculus 50 1700030G11Rik ENSMUSG00000027517 ENSMUST00000029022,ENSMUST00000109112 1 2 2 80 2 173398039 173398060 TATGTATCTGGCATTACGATGG 59 173396699 173397999 CAAGACATGACATCTTGCTG 59 NA Mus musculus 50 Epb4.1l1 ENSMUSG00000027624 ENSMUST00000103137,ENSMUST00000109577,ENSMUST00000109571,ENSMUST00000029155,ENSMUST00000103136,ENSMUST00000088565,ENSMUST00000103135 2 7 12 89 2 156350946 156350964 CCAAGAGGATGAATCTGGG 59 156351016 156352635 GCTTTCACAGACTCAAACTG 59 NA Mus musculus 50 Sh2d2a ENSMUSG00000028071 ENSMUST00000107581,ENSMUST00000029709 2 2 2 94 3 87653336 87653354 GAACATTACACAGAGTGCC 58 87655655 87655673 CTTAGGGAAAGTCCAGCAG 59 NA DesignNoJunction Mus musculus 50 1700003M02Rik ENSMUSG00000028294 ENSMUST00000029971 1 1 3 128 4 34639773 34658666 CATACCCTATTCTCAGATGAGAG 59 34639667 34639687 TCGTTCCACTCATATGTTCTC 59 NA Mus musculus 50 Tnc ENSMUSG00000028364 ENSMUST00000030056,ENSMUST00000107372,ENSMUST00000070019,ENSMUST00000107379,ENSMUST00000107377,ENSMUST00000107375,ENSMUST00000107374 1 7 8 80 4 63668428 63668446 GATTGGTGTTTCTGCTGTC 59 63667528 63668384 TTGGGTGCATCAATTTCTG 58 NA Mus musculus 50 Slc46a2 ENSMUSG00000028386 ENSMUST00000030081 1 1 1 60 4 59925439 59925459 CCATGTCCAAACTCATAAAGG 58 59924839 59924857 CACAGCTGTAGTATGACGA 58 NA DesignNoJunction Mus musculus 50 Wdr31 ENSMUSG00000028391 ENSMUST00000107452 3 1 3 94 4 62124499 62124970 ACTTATACAGGCCTGATGG 58 62124423 62124441 AATCACAGAGACGGTATCC 58 NA Mus musculus 50 Bnc2 ENSMUSG00000028487 ENSMUST00000107198 1 1 3 131 4 84060251 84201699 ATCCATCTCAACTTGAGGC 59 84037017 84060156 GTTTATCCAAGGCATGTGC 59 NA Mus musculus 50 Dnajc6 ENSMUSG00000028528 ENSMUST00000106930,ENSMUST00000038207,ENSMUST00000106933,ENSMUST00000094953 2 4 4 80 4 101285651 101286788 GAACGAATGAAAGAATACCGTG 59 101286829 101286847 AACGATGACATCACCTTGG 59 NA Mus musculus 50 Macf1 ENSMUSG00000028649 ENSMUST00000106213,ENSMUST00000097899,ENSMUST00000106214 2 3 12 81 4 123074387 123074405 AAGCTCAGTACAGTGTTCG 59 123073228 123074343 CTTCATTTAAAGCCAGGTGG 59 NA Mus musculus 50 Wasf2 ENSMUSG00000028868 ENSMUST00000084241,ENSMUST00000097853,ENSMUST00000105912 3 3 3 83 4 132741011 132741526 AGAAGAAGTGTCACTACAAGG 59 132741570 132741589 TTCCTGTCAAAGAGCTTCTG 59 NA Mus musculus 50 Acot7 ENSMUSG00000028937 ENSMUST00000075363,ENSMUST00000030779,ENSMUST00000105652 3 3 3 84 4 151597196 151597214 CAATAAAGCCACCTTGTGG 59 151597261 151603892 CCGTAAATACACAATGGGAG 58 NA Mus musculus 50 Crmp1 ENSMUSG00000029121 ENSMUST00000087535 1 1 3 146 5 37670969 37677684 GGTCATGAGCAAGATTGTC 58 37680051 37680069 CTGGAAACACTATGCAACC 58 NA Mus musculus 50 Aff1 ENSMUSG00000029313 ENSMUST00000100975,ENSMUST00000054979,ENSMUST00000031256 3 3 4 84 5 104263464 104270078 ACCAAGAAGAGAAAGGGTG 59 104270126 104270144 ATGAAGATGACGCAGTCTG 59 NA Mus musculus 50 Ncor2 ENSMUSG00000029478 ENSMUST00000111398,ENSMUST00000111402,ENSMUST00000111401,ENSMUST00000111393,ENSMUST00000086083,ENSMUST00000055256 3 6 8 153 5 125583062 125586579 ATGAGAACCGGAAGAAAGC 59 125572058 125572077 TACAAGATCAGCTTCTTCCG 59 NA Mus musculus 50 Cit ENSMUSG00000029516 ENSMUST00000112006 2 1 6 155 5 116376299 116376484 TGATGGAGCAGGAAATGAC 59 116376601 116377854 GCTTTAAGCTACTGCATTCTG 59 NA Mus musculus 50 St7 ENSMUSG00000029534 ENSMUST00000115419,ENSMUST00000052113,ENSMUST00000081635,ENSMUST00000000674,ENSMUST00000077080,ENSMUST00000053148,ENSMUST00000115417 3 7 7 177 6 17872066 17872085 TGCATTCTTTCATCTTGCAC 59 17880851 17884129 TTCATGGAAAGAGGGAAGC 59 NA Mus musculus 50 Ccdc136 ENSMUSG00000029769 ENSMUST00000096084 1 1 2 233 6 29367932 29367950 CACTTTGAGGAAACAGTGG 58 29368147 29369113 CAGTTCTTTGATCTCGCAC 58 NA DesignRelaxed Mus musculus 50 Rad18 ENSMUSG00000030254 ENSMUST00000077088,ENSMUST00000068487 2 2 3 73 6 112622183 112625747 TAAATCAGCTGCTGAAATCG 58 112622129 112622147 GTTTACTTGCTTCAAGGCG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Caprin2 ENSMUSG00000030309 ENSMUST00000111569,ENSMUST00000072324 1 2 2 80 6 148821575 148821594 AGAAGTGCTAATGCAATCAG 58 148819163 148821534 AGTTCCGTAAGAGATTCTGAC 59 NA Mus musculus 50 Cd27 ENSMUSG00000030336 ENSMUST00000032486,ENSMUST00000116533 2 2 3 131 6 125184595 125184613 CTCTAAACCCTGCACTGAC 59 125184284 125184303 TATAGACAGTCGAGTTGGGA 59 NA DesignNoJunction Mus musculus 50 Cd37 ENSMUSG00000030798 ENSMUST00000033063,ENSMUST00000098461,ENSMUST00000107797 3 3 3 62 7 52490779 52490797 AAAGCTCACATCTACCGTG 59 52490096 52490114 GATATTGTTGTGCAGCCAC 59 NA DesignNoJunction Mus musculus 50 Fgfr2 ENSMUSG00000030849 ENSMUST00000033138 3 1 4 81 7 137385941 137385959 CCTCTATGCTTGTACTGCA 59 137384778 137385896 AGATGAGATGGCATCTGTG 59 NA Mus musculus 50 Chic1 ENSMUSG00000031327 ENSMUST00000116547,ENSMUST00000033690 2 2 2 167 X 100582638 100583332 ATTATACCACAAGCTTGCTC 57 100584872 100584893 GGTAGGAAATGACAGATAACAC 58 NA InUTR Mus musculus 50 Gpm6b ENSMUSG00000031342 ENSMUST00000112236,ENSMUST00000060210,ENSMUST00000112228,ENSMUST00000112229 2 4 12 80 X 162821867 162821887 TTCTACATGTCCTATCACCTG 58 162821929 162824898 CATGAGGAAGTGGATCAGG 59 NA Mus musculus 50 Gabra3 ENSMUSG00000031343 ENSMUST00000114554,ENSMUST00000055966 2 2 2 82 X 69704974 69704992 ACGCCTGAATCAGTATGAC 59 69696978 69704930 TCATGACGACATATTCTCCTG 59 NA Mus musculus 50 Mtmr2 ENSMUSG00000031918 ENSMUST00000115652,ENSMUST00000034396 2 2 3 81 9 13590364 13593035 AGATATGGCCAAAGATGTG 57 13593079 13593098 TAACCTGTAACTTGTGACAG 57 NA Mus musculus 50 Trpc6 ENSMUSG00000031997 ENSMUST00000050433 3 1 2 91 9 8643640 8643658 CACAGATAATGCAAGGCAG 58 8643711 8649306 ATATCATGCCTATTACCCAGG 58 NA Mus musculus 50 Ets1 ENSMUSG00000032035 ENSMUST00000034534,ENSMUST00000050797 2 2 3 60 9 32540601 32541532 TTACTTCATCAGCTACGGT 57 32541556 32541574 CTCTGAGAACTCTGAGGGA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ilf3 ENSMUSG00000032178 ENSMUST00000067646,ENSMUST00000115414,ENSMUST00000115413 1 3 3 80 9 21196822 21196840 GTCCTTGACCATCCATCTG 59 21196883 21198170 TTGACTGATAGCGTTTCTCC 59 NA Mus musculus 50 Lrrc1 ENSMUSG00000032352 ENSMUST00000049755,ENSMUST00000113421,ENSMUST00000113419 3 3 3 82 9 77347096 77347114 TAATGAAATTCAGCGGCTC 58 77320029 77347050 CAGGTATATCATTCCGGGA 57 NA Mus musculus 50 Atp2c1 ENSMUSG00000032570 ENSMUST00000085133,ENSMUST00000038118,ENSMUST00000112558 3 3 4 83 9 105348501 105351166 CACTATTAGTGTAAGCTTGGC 58 105348438 105348456 ATAACACCAAGGGCTAGAG 58 NA Mus musculus 50 Sh3px3 ENSMUSG00000032733 ENSMUST00000050916 3 1 1 60 9 56774532 56774552 TGAGAACAAGGAGGAAATCAG 59 56774492 56774512 GGTCTCACTGAAGATAACCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gas7 ENSMUSG00000033066 ENSMUST00000108681,ENSMUST00000041611,ENSMUST00000108682,ENSMUST00000108680 2 4 4 113 11 67416709 67416727 TATGTCAACACGACTACCA 57 67443183 67456793 GTATCCATTCACTGTTGTAGG 58 NA Mus musculus 50 2700078E11Rik ENSMUSG00000033417 ENSMUST00000081790 3 1 2 82 19 60613367 60613385 CAACACCATTTCAGGTCAC 58 60610164 60613321 CATCTGAACCCATTCTGGT 59 NA Mus musculus 50 Exoc6b ENSMUSG00000033769 ENSMUST00000101224 2 1 4 113 6 84939501 84939519 TATCCTGCACTGAAGACAC 58 84939404 84939425 TTTATTTCCTCCCGACTTGG 59 NA Mus musculus 50 Bzrap1 ENSMUSG00000034156 ENSMUST00000039627,ENSMUST00000100644,ENSMUST00000107939,ENSMUST00000107936 3 4 6 89 11 87585267 87585567 CACGCTATAGCTACAACCC 59 87585616 87585638 CATAGATGTAGATATACTCGCCC 59 NA Mus musculus 50 Agpat1 ENSMUSG00000034254 ENSMUST00000037489,ENSMUST00000114140 3 2 2 100 17 34747498 34747516 AAGATGGCCTTCTACAACG 59 34747579 34747825 CGCAAGATCTTCATGTTCTC 59 NA DesignRelaxed Mus musculus 50 Pkd1l2 ENSMUSG00000034416 ENSMUST00000109093,ENSMUST00000040422 1 2 3 90 8 119521559 119521985 CTATGAAGAGGTCCTGGAC 58 119521487 119521508 CAGATTCAGTACCACAAATGTC 59 NA Mus musculus 50 Zfp707 ENSMUSG00000034429 ENSMUST00000109966,ENSMUST00000109967 1 2 2 98 15 75803626 75803977 TTGAATGAACTGGGATGCT 59 75804039 75804057 AAACTCAGATCTGTCCCAG 58 NA Mus musculus 50 Rsrc1 ENSMUSG00000034544 ENSMUST00000065074,ENSMUST00000046542,ENSMUST00000065047,ENSMUST00000065115 2 4 4 159 3 66984775 67010354 ATTAGAACATCTGCCTCCAG 59 67153838 67153856 GACTTGTTCTACCAGGGTG 59 NA Mus musculus 50 Mon2 ENSMUSG00000034602 ENSMUST00000037557 2 1 2 192 10 122459995 122460978 CCATCTACTTGAGGTCTGC 59 122457467 122457486 GAGTCGAATATCTGGATGGT 58 NA Mus musculus 50 Dopey1 ENSMUSG00000034973 ENSMUST00000038579 1 1 3 163 9 86399904 86399992 GTTTGAAGAATGTTGTCGTC 57 86400118 86400487 TTCTAGTAGGCAAGGAGAC 57 NA Mus musculus 50 C8a ENSMUSG00000035031 ENSMUST00000048947 2 1 3 182 4 104494632 104494650 GGTGTCAGTGTAGTATGGG 59 104488506 104490169 CATGTTGATCTCCATTCTTGG 59 NA Mus musculus 50 Palm ENSMUSG00000035863 ENSMUST00000046945 1 1 2 130 10 79277978 79279546 TGAAAGCAGCCATGTACTC 59 79279640 79279658 GTCCTCGTAGACTTTCACG 59 NA Mus musculus 50 Tbc1d24 ENSMUSG00000036473 ENSMUST00000097376 1 1 2 80 17 24321340 24322164 CTGTCAAACAGAAGAGTGTC 58 24320751 24320769 TCTCTGAGTGGAAGTTCTC 57 NA Mus musculus 50 Etl4 ENSMUSG00000036617 ENSMUST00000114627,ENSMUST00000114620,ENSMUST00000114619,ENSMUST00000045555,ENSMUST00000114614,ENSMUST00000114609,ENSMUST00000066509,ENSMUST00000114607,ENSMUST00000114608,ENSMUST00000114606 3 10 12 193 2 20719650 20720252 ATGTCTAAGGTGAGCAGTG 58 20720409 20723185 GAACACTTCTGGAATGCCT 59 NA Mus musculus 50 Nudt1 ENSMUSG00000036639 ENSMUST00000071881,ENSMUST00000050205,ENSMUST00000110827,ENSMUST00000110826 3 4 4 135 5 140811402 140813554 AGAAAGTGAAGAAATGCGC 59 140813653 140813671 ATCCTGGAACTTGAAGTGC 59 NA Mus musculus 50 Endod1 ENSMUSG00000037419 ENSMUST00000041780 3 1 1 60 9 14162033 14162053 CAAAGACCTGTATATCCTCAC 57 14161993 14162011 CACTTTGCCCTTAACTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Igsf9 ENSMUSG00000037995 ENSMUST00000075014 3 1 3 127 1 174424677 174425246 ATATGTGCTAGAGCCAAGC 59 174425336 174425355 AGGACACTGAACTGATACTG 58 NA InUTR Mus musculus 50 Hoxa13 ENSMUSG00000038203 ENSMUST00000047993,ENSMUST00000114416 2 2 2 188 6 52209954 52209973 TTCCCATGGAAAGCTATCAG 59 52209070 52209088 ACTGCACCTTAGTGTAAGG 58 NA DesignNoJunction Mus musculus 50 Mapkap1 ENSMUSG00000038696 ENSMUST00000040459,ENSMUST00000113129,ENSMUST00000113124,ENSMUST00000113123,ENSMUST00000113126 3 5 5 86 2 34475387 34475405 GTATCTAAGCAGCCATGAC 57 34475454 34478953 ATGTAGTTAACCTTGAGCAC 57 NA Mus musculus 50 Ptpn3 ENSMUSG00000038764 ENSMUST00000075637,ENSMUST00000043585 2 2 2 80 4 57238444 57238593 GTGATAAGAGTGACGATGGA 58 57238383 57238402 GGTTAAAGCCAAATCTTCCC 59 NA Mus musculus 50 Cdc123 ENSMUSG00000039128 ENSMUST00000043864 1 1 3 81 2 5742326 5742344 ATCACCCATGACTTCACAC 59 5728543 5731850 GGAGAACAAGCTCGTACTC 59 NA Mus musculus 50 Gpatch2 ENSMUSG00000039210 ENSMUST00000044812 2 1 5 87 1 189057627 189057646 TTTCCAAGCTAGACTCAGTC 59 189057695 189057841 GTTTGTAGCCATTGAAGGTG 59 NA Mus musculus 50 Nploc4 ENSMUSG00000039703 ENSMUST00000044271 1 1 2 82 11 120245966 120247094 GTGAAACACAGGACTTCCA 59 120245902 120245921 GAAGTCGGAAATGGTATCCA 59 NA Mus musculus 50 Trub2 ENSMUSG00000039826 ENSMUST00000048044 1 1 3 104 2 29637644 29637662 GCTGATAGAGAAGACAACG 57 29634380 29635352 TTGGAGTACATCACCAGAG 58 NA Mus musculus 50 Trim14 ENSMUSG00000039853 ENSMUST00000046897,ENSMUST00000102924 3 2 2 82 4 46536605 46545898 GAAAGGCTCAAGGTTTACG 58 46536541 46536561 TCTTCATCCAGGAGTAATCTG 58 NA Mus musculus 50 Trim7 ENSMUSG00000040350 ENSMUST00000046903,ENSMUST00000093155 3 2 4 80 11 48652364 48652382 CCTTGAAGAAGGTACTGGA 58 48652426 48658947 CCATCTGCTTTAGAAGCTC 57 NA Mus musculus 50 Klhl32 ENSMUSG00000040387 ENSMUST00000084781 1 1 6 80 4 24609406 24671014 TACAGGACAGGAACTAAATAGC 59 24609347 24609365 TTCTCCAACAAAGTGAGGT 58 NA Mus musculus 50 Bptf ENSMUSG00000040481 ENSMUST00000057892 3 1 4 82 11 106956366 106956384 CAGAGACCCATGATAGCAG 59 106944001 106956320 CAGTCTGAAATCACCTGGT 59 NA Mus musculus 50 Adam22 ENSMUSG00000040537 ENSMUST00000115388 2 1 13 81 5 8111945 8111963 AATAGGAATAATTGCCGGC 57 8092819 8111903 GAGTCCATTTGACTTATAACCC 58 NA Mus musculus 50 Pitpnm3 ENSMUSG00000040543 ENSMUST00000075258,ENSMUST00000108508,ENSMUST00000108507 1 3 3 83 11 71880664 71880682 CTGACTTCTTCCTCTTCGG 59 71879130 71880618 TCTGGAAACCATCTATCCCA 59 NA Mus musculus 50 Erc2 ENSMUSG00000040640 ENSMUST00000100776,ENSMUST00000100777,ENSMUST00000079438 1 3 5 80 14 28853666 28853684 CAAGGAGGTGGAGAATGAG 59 28859666 28893329 TCTTTCATGTGCCTGAGAG 59 NA Mus musculus 50 Dlk1 ENSMUSG00000040856 ENSMUST00000056110,ENSMUST00000109844,ENSMUST00000109843,ENSMUST00000109846,ENSMUST00000109841 3 5 5 111 12 110696416 110697825 TGATCAATGGTTCTCCCTG 58 110697900 110697918 ATCTCACAGAAGTTGCCTG 59 NA Nonspecific Mus musculus 50 Meis3 ENSMUSG00000041420 ENSMUST00000098793 2 1 2 102 7 16763088 16763106 CTTTGAGAAGTGTGAGCTG 58 16763172 16764329 GTGACAGAAGTCAGAGGAG 59 NA Mus musculus 50 Wipi1 ENSMUSG00000041895 ENSMUST00000103060 1 1 4 81 11 109438419 109438437 AGTTATTCCGGAACACGAG 59 109435267 109438374 ACGGCACAAGATTATAGGG 59 NA Mus musculus 50 4833418A01Rik ENSMUSG00000041966 ENSMUST00000064155,ENSMUST00000112167,ENSMUST00000102701,ENSMUST00000064141 2 4 6 85 2 70916148 70916167 CACATGGAATCCTGATTGTG 58 70916215 70916542 CTGTTGCATGAACTGTTCG 59 NA Mus musculus 50 Dao1 ENSMUSG00000042096 ENSMUST00000112292,ENSMUST00000047033 1 2 3 80 5 114469952 114469970 AAACACTTCATCCTCACCC 59 114470014 114470948 CGTAACTGTCTTGGAACCT 59 NA Mus musculus 50 Sestd1 ENSMUSG00000042272 ENSMUST00000102660,ENSMUST00000044107,ENSMUST00000102659 3 3 3 81 2 77030629 77034890 AGGAAACAAAGATGTGAGGA 58 77030567 77030588 CCTCTTCACACTTAAACAACTG 59 NA Mus musculus 50 Osbpl6 ENSMUSG00000042359 ENSMUST00000111929,ENSMUST00000077972,ENSMUST00000090784,ENSMUST00000111930 2 4 5 86 2 76398310 76402852 CTACAACAGTTCCTTTCAGC 58 76402901 76402919 TCTGGAACTCAATGTCTGC 59 NA Mus musculus 50 Osbpl6 ENSMUSG00000042359 ENSMUST00000111929,ENSMUST00000077972,ENSMUST00000090784 1 3 5 95 2 76394026 76398247 AAATACAGCTCCAGGAAGG 58 76398306 76402847 AAGGAACTGTTGTAGCCAC 59 NA Mus musculus 50 Prdm10 ENSMUSG00000042496 ENSMUST00000098915,ENSMUST00000074510 2 2 2 97 9 31123833 31123851 GTGTATACAGCAGATGGTG 57 31123912 31126107 GTAAACAGAGTCTGTGCAG 58 NA Mus musculus 50 Dmtf1 ENSMUSG00000042508 ENSMUST00000040604 2 1 5 93 5 9132486 9132505 GTTTATAGAAGAGTGCTGCG 58 9130642 9131283 TCCACAGTTGTTCCTTGAG 59 NA Mus musculus 50 4933417O08Rik ENSMUSG00000042532 ENSMUST00000087123,ENSMUST00000049129 1 2 2 80 19 42341500 42341519 CAGAATGAGAAGGTCTTTGC 58 42341562 42342853 GGAGATCTCGATAACCCTC 58 NA Mus musculus 50 Dusp15 ENSMUSG00000042662 ENSMUST00000109811,ENSMUST00000037715 3 2 3 134 2 152776376 152777074 CAAGGTACTTCCTGGACTC 58 152772060 152774778 AGGTAGGTGATATCCTGCA 59 NA Mus musculus 50 1110032A04Rik ENSMUSG00000043461 ENSMUST00000051239 2 1 1 136 3 69642044 69642062 ACACCAGATTGTTCAGAGG 59 69624977 69624995 TTGATAATAGAGCCAGGCA 58 NA DesignNoJunction, InUTR Mus musculus 50 Thrap3 ENSMUSG00000043962 ENSMUST00000080919 1 1 3 83 4 125844769 125844787 TCGACAAATCCAGATTGGG 59 125844309 125844723 CACGAAATTGAAAGGTTCCC 59 NA Mus musculus 50 A830010M20Rik ENSMUSG00000044060 ENSMUST00000100951,ENSMUST00000060553,ENSMUST00000112672 1 3 4 84 5 107933025 107933532 CAACTGCAGCAGTAAAGTC 59 107933577 107933598 GAGTCTTGTTCATGAGTAAAGC 59 NA Mus musculus 50 Uqcrq ENSMUSG00000044894 ENSMUST00000061326,ENSMUST00000109021,ENSMUST00000109019 3 3 3 142 11 53242633 53242651 GTTTGTAGTGGTCTACCTG 57 53242509 53242527 AGAGAAGGGTCTTTCAGAG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Suv420h1 ENSMUSG00000045098 ENSMUST00000113973,ENSMUST00000113972,ENSMUST00000113968,ENSMUST00000052699,ENSMUST00000113970,ENSMUST00000113967 1 6 9 127 19 3793169 3793189 GTTCTTGATCCCTACTTAGGT 58 3796702 3802086 ATAGGCCGAAATCTCACAG 59 NA Mus musculus 50 Tmem86b ENSMUSG00000045282 ENSMUST00000055085 2 1 1 89 7 4581197 4581215 CTTGTATGTTCTGCTGTGG 58 4580324 4580342 GAATAAGTGGGCAACAGAG 58 NA DesignNoJunction Mus musculus 50 Sned1 ENSMUSG00000047793 ENSMUST00000062202 2 1 1 80 1 95172038 95177068 CAGTGCATTGAAGTAGATGAG 58 95177110 95177128 CTGGTAATCAGCAATGAGG 57 NA Mus musculus 50 BC024997 ENSMUSG00000048329 ENSMUST00000053211 1 1 1 60 11 68370286 68370304 GGCTTTCCAAATGGATCTG 58 68370327 68370346 CAGAGCCCACTAAATAGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sp8 ENSMUSG00000048562 ENSMUST00000095338,ENSMUST00000063918 2 2 2 63 12 120086899 120086917 CTGTAATAAGATCGGCAGC 58 120086944 120086962 GAAGGAAGAAGAGCTGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 E430004N04Rik ENSMUSG00000049109 ENSMUST00000056097,ENSMUST00000105515,ENSMUST00000105516,ENSMUST00000060409 1 4 4 91 10 28442367 28442385 ATGGCTGAAATTTGTGAGG 58 28442439 28480976 ATGACCTTAAAGAGACCTGG 58 NA InUTR Mus musculus 50 Setd8 ENSMUSG00000049327 ENSMUST00000059580,ENSMUST00000111458 3 2 2 169 5 124900818 124900837 TTCTACCAATGTAGCAGTCG 59 124901374 124907077 TTTCTTCAGACTGCAGCTC 59 NA Nonspecific Mus musculus 50 Nhedc1 ENSMUSG00000050150 ENSMUST00000078568,ENSMUST00000116272,ENSMUST00000090209 2 3 3 81 3 135034972 135036094 TCTCATTGGGATGTTACTGG 59 135036137 135036156 CCATGTGGTAGGAATATGGA 58 NA Mus musculus 50 4930422G04Rik ENSMUSG00000051278 ENSMUST00000043108 2 1 2 82 3 127316374 127318046 TTTGCTTAATGGCATGTGG 58 127318091 127318110 ATTAGCTATGGCACTGATCG 59 NA Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000099981,ENSMUST00000111846 3 2 14 80 2 76732727 76732747 CAGTATACTTGCCAAGTTACC 58 76732467 76732685 AAATTTCGGTGGTTCTGTC 58 NA Mus musculus 50 ENSMUSG00000052976 ENSMUSG00000052976 ENSMUST00000065159 2 1 1 60 19 29143696 29143717 CTTTCAAGGAGACTTAATCCAG 58 29143736 29143756 GACTCTGAACAAGATTGTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nanp ENSMUSG00000053916 ENSMUST00000066640 1 1 1 60 2 150856248 150856268 GAACAGAAGGAAGAGAAACCA 59 150856208 150856226 CTCCAAGAAGATCACAGCA 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Spock3 ENSMUSG00000054162 ENSMUST00000093480 1 1 2 179 8 65592238 65592356 AGGATGATTATTTCCGCAC 57 65622806 65699453 CTCCTACTTCTTTCATACTGTG 57 NA Mus musculus 50 Slc8a1 ENSMUSG00000054640 ENSMUST00000071424 3 1 4 92 17 81844856 81844875 TTCATTGAGATTGGAGAGCC 59 81844269 81844287 TCTCATATTCCTCACGGTC 58 NA DesignNoJunction Mus musculus 50 BC052328 ENSMUSG00000056069 ENSMUST00000069955,ENSMUST00000100739 1 2 2 80 15 27589692 27589710 GAGAAGTACACAGGTTCCA 58 27588055 27589648 ACTAAACTCAGTCCACTGC 59 NA Mus musculus 50 Grik2 ENSMUSG00000056073 ENSMUST00000105487,ENSMUST00000105485,ENSMUST00000078692,ENSMUST00000079751 3 4 6 80 10 49124249 49139484 GTCTGGAGAAGATTGGGAC 59 49124187 49124206 TAATATTTGCTGGCTTCCCT 59 NA Nonspecific Mus musculus 50 R3hdm1 ENSMUSG00000056211 ENSMUST00000036288,ENSMUST00000097596 1 2 2 80 1 130075501 130075520 GTGAAGACTTTCAGAAACGA 58 130075563 130075676 AACGTATTCTCATCTGGCT 58 NA Mus musculus 50 Gpr173 ENSMUSG00000056679 ENSMUST00000070316 1 1 1 84 X 148801966 148801985 GCTGCTATAGGAATAGAGGA 57 148782189 148782208 GAGACAGAGTGGTAAATGAG 57 NA DesignNoJunction, InUTR Mus musculus 50 BC051142 ENSMUSG00000057246 ENSMUST00000114175,ENSMUST00000068051 1 2 7 96 17 34558919 34576786 TTCATCAGATAGCGTGCAG 59 34580384 34580402 AATAGGTCCAGGAGTTTGC 59 NA Mus musculus 50 Ryr3 ENSMUSG00000057378 ENSMUST00000080673 3 1 3 131 2 112868835 113057099 ACTGAGGATGAAGTTGTACTC 59 112836836 112868743 AGGAATGTACTTGGCTTCTG 59 NA Mus musculus 50 Camk2b ENSMUSG00000057897 ENSMUST00000109815,ENSMUST00000019133,ENSMUST00000109813,ENSMUST00000101585 1 4 10 122 11 5888123 5888141 CATCCTCACCACTATGCTG 59 5882752 5887068 AAACTCTTGGCTTGTTCCA 59 NA Mus musculus 50 Nrf1 ENSMUSG00000058440 ENSMUST00000115212,ENSMUST00000115211,ENSMUST00000115206,ENSMUST00000115209,ENSMUST00000115200,ENSMUST00000115199,ENSMUST00000069808,ENSMUST00000069831,ENSMUST00000004761 2 9 10 63 6 30066240 30066258 CAGACCGTAGTACAGACCT 59 30066285 30067065 CTGTACCAACCTGGATGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 EG624681 ENSMUSG00000058762 ENSMUST00000114163,ENSMUST00000075483 1 2 2 111 17 34651004 34651022 TTCAGAAGGGAACGTTCTG 59 34650704 34650930 TGAGTGCATCAATAGTCCTC 59 NA Mus musculus 50 Krt40 ENSMUSG00000059169 ENSMUST00000107443,ENSMUST00000074253 1 2 2 80 11 99401432 99401451 GATGTCAATACGAGAGGGTG 59 99401296 99401389 GGTTCAGCTCTTCTGTCTG 59 NA Mus musculus 50 Sept9 ENSMUSG00000059248 ENSMUST00000093907,ENSMUST00000106351 1 2 7 80 11 117061078 117080197 TCCTACTCAGGAGTCACAC 59 117080241 117151725 CGATCTCTTTAAGGCTGGG 59 NA Mus musculus 50 Bcas3 ENSMUSG00000059439 ENSMUST00000108062,ENSMUST00000108061,ENSMUST00000092821 3 3 12 175 11 85615442 85627507 GGATCTGGAACAGACACAG 59 85635602 85638709 GAAGTTCTTCCTCCGTCTC 59 NA Mus musculus 50 Kcnh7 ENSMUSG00000059742 ENSMUST00000075052,ENSMUST00000112454,ENSMUST00000112452 3 3 3 83 2 62715408 63020124 ATCACAAGAATGGTTCCAC 57 62715343 62715361 TGATGAACATCATAGCCAC 57 NA Mus musculus 50 Zfp422 ENSMUSG00000059878 ENSMUST00000057540,ENSMUST00000112880,ENSMUST00000079749 2 3 3 63 6 116576622 116576640 TACTGCTGTGATGAGTGTG 59 116576577 116576595 TTCTCTGGTGCTGAATGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hspa2 ENSMUSG00000059970 ENSMUST00000080449,ENSMUST00000110404 3 2 2 60 12 77506766 77506785 CTCATCAAGAGAAACACCAC 58 77506808 77506826 CTGAGTAGGTAGTGAAGGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Atxn7l3 ENSMUSG00000059995 ENSMUST00000073234,ENSMUST00000107134 3 2 3 109 11 102154624 102154967 CAGACAAGAACCCTAATTCC 57 102154061 102154079 ATAGCTGATCCCAGTTGAG 58 NA Mus musculus 50 Chpt1 ENSMUSG00000060002 ENSMUST00000020253,ENSMUST00000047619,ENSMUST00000073783 3 3 3 80 10 87952375 87952393 CAGAAGGACAAACTCTTGC 58 87951256 87952332 ATGGCCATAAATACTGTGGA 58 NA Mus musculus 50 Ctnna3 ENSMUSG00000060843 ENSMUST00000105441,ENSMUST00000105440 3 2 3 80 10 62966812 62966832 AATATGGACACTCAGGATCTG 58 62966870 63000277 GGTAGTAACCTGGATTATCAGAG 59 NA Mus musculus 50 Tnnt3 ENSMUSG00000061723 ENSMUST00000105953,ENSMUST00000074187,ENSMUST00000105956,ENSMUST00000105949,ENSMUST00000105945,ENSMUST00000105943,ENSMUST00000105942,ENSMUST00000105941 3 8 20 126 7 149687559 149689956 CTGAACAAGTTGAGGAGGA 58 149696595 149697163 TCATCAAAGTCTACTTTCTCCC 59 NA Mus musculus 50 Flot2 ENSMUSG00000061981 ENSMUST00000072289 2 1 4 82 11 77862989 77863008 GTGGTTCTGACTACAAACAG 58 77863053 77868296 TAGGGAAATCCTCTGAGTG 57 NA Mus musculus 50 Kcnc3 ENSMUSG00000062785 ENSMUST00000107907 2 1 2 60 7 51858096 51858114 CAGTCTCCACTCTATCCCA 59 51858136 51858156 CAGGTTCTGTCTCCTTAAGTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Phactr2 ENSMUSG00000062866 ENSMUST00000105547,ENSMUST00000105543,ENSMUST00000079698 1 3 7 80 10 12981620 12981638 GAAGAAGGGAGTGACTCTG 58 12975126 12981576 AGTGGTTGTAGTCACTGTC 58 NA Mus musculus 50 A130090K04Rik ENSMUSG00000064065 ENSMUST00000058132,ENSMUST00000105617 3 2 5 84 10 3367011 3390412 GGTATAGCAATCAAATGGCAG 59 3390458 3390476 TTCTTGCATTCAGAGGCTC 59 NA Mus musculus 50 Zfp760 ENSMUSG00000067928 ENSMUST00000115541 2 1 2 92 17 21858030 21859332 CTCTGTTGACTTGTACAGC 58 21859388 21859406 ATGTGTACTGAGGCTTGAG 58 NA Mus musculus 50 Rnf213 ENSMUSG00000070327 ENSMUST00000093902,ENSMUST00000082107 2 2 2 87 11 119288973 119289336 CTGGAACTTAAATAGAAGGCG 58 119289385 119289403 CAGCAGATCATCCCTTCTC 59 NA Mus musculus 50 Defcr16 ENSMUSG00000074444 ENSMUST00000098898 2 1 1 159 8 22274345 22274364 AAGACACTAATCCTCCTCTC 57 22274486 22274504 GAAGAGAAGAGCCTTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Vps25 ENSMUSG00000078656 ENSMUST00000107280,ENSMUST00000042477,ENSMUST00000100414,ENSMUST00000007533 1 4 4 84 11 101117402 101118200 TTACCAATGGGTTTCCAGG 59 101118248 101118266 TTCATCCTCTGTGTCTTCC 58 NA Mus musculus 50 Tm2d3 ENSMUSG00000078681 ENSMUST00000065574,ENSMUST00000107495 2 2 3 98 7 72838744 72838763 AAATTTAGAGCATTCGCAGC 59 72838824 72840041 AACAGCTGATTCTCTGCTG 59 NA Mus musculus 50 0610010B08Rik ENSMUSG00000078899 ENSMUST00000109050,ENSMUST00000109049 1 2 3 95 2 175152977 175152998 GACCTATAAGAATCTCACAGCT 59 175151541 175152716 CTTTCATGCCTTCCATGAC 58 NA Nonspecific Mus musculus 50 Klra1 ENSMUSG00000079853 ENSMUST00000032288,ENSMUST00000081796 2 2 3 80 6 130330621 130330639 TAAATCTGCAGGATTGCAG 57 130329091 130330577 AATGAACACCTTCTGTAGC 57 NA Mus musculus 50 Hist1h2ao ENSMUSG00000060262 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Dazap2 ENSMUSG00000000346 ENSMUST00000000356 3 1 1 171 15 100447455 100448366 ATTCAGAGCTCTATCGTCC 58 100448501 100448519 GGATAGATGGGACCAACTG 59 NA Mus musculus 50 Slc5a5 ENSMUSG00000000792 ENSMUST00000000809 1 1 1 91 8 73412483 73412501 TGTAACTGTGGAAGACCTC 58 73412339 73412429 CATAGATGAATGAGAGCCCT 58 NA Mus musculus 50 Ccl3 ENSMUSG00000000982 ENSMUST00000001008 3 1 1 159 11 83462712 83462730 TCTGCAACCAAGTCTTCTC 59 83461825 83461843 CGGTTTCTCTTAGTCAGGA 58 NA DesignNoJunction Mus musculus 50 Luzp1 ENSMUSG00000001089 ENSMUST00000105848 2 1 4 148 4 136098685 136098769 AAAGCAAAGTGACAAGCAG 59 136098880 136098899 GACATGGTTGCTAATTGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rrp15 ENSMUSG00000001305 ENSMUST00000001339 3 1 1 193 1 188563647 188563665 GAGGAAGACAATGAAGACG 57 188561554 188563490 TTCTTATCAAGCTGCTTCC 57 NA Mus musculus 50 Sept7 ENSMUSG00000001833 ENSMUST00000115272,ENSMUST00000060080 1 2 2 80 9 25085219 25094258 AAAGACTGTACAGGTGGAG 58 25094300 25094320 GGAGTATCAACTATTGTCAGC 58 NA Mus musculus 50 Trmt1 ENSMUSG00000001909 ENSMUST00000001974,ENSMUST00000109766,ENSMUST00000109767,ENSMUST00000109768 3 4 4 82 8 87219228 87219336 GTGATGGAGGACTTCTGTG 59 87219380 87219400 ATACTTGCTGTAGCATGTCTC 59 NA Mus musculus 50 Baz1b ENSMUSG00000002748 ENSMUST00000002825 3 1 1 80 5 135697955 135698963 CAACCATAACAGATACTGGCT 59 135699003 135699023 TCAATGCTATTATGGACCCAG 59 NA Mus musculus 50 Abca13 ENSMUSG00000004668 ENSMUST00000042740,ENSMUST00000109684 3 2 2 80 11 9174717 9174735 TTTATACCTGCTGGGTCTG 58 9174779 9175031 ATTCTTTGTCAACAGCTGG 58 NA Mus musculus 50 Prkaca ENSMUSG00000005469 ENSMUST00000005606,ENSMUST00000059266 1 2 2 83 8 86518848 86519198 ATCAGAGAAAGGTGGAAGC 59 86519245 86519263 CTTCCTCCTCATAGTCGTC 58 NA Mus musculus 50 Ankrd13d ENSMUSG00000005986 ENSMUST00000056888,ENSMUST00000075870 3 2 2 249 19 4271125 4271232 CATTTCTGCTTCAGGAAGC 59 4270812 4270830 TCTTCAAACACTGTGACTC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Tep1 ENSMUSG00000006281 ENSMUST00000006444 3 1 1 80 14 51480713 51482165 AGATTACGTTTGAAGCAGC 58 51480651 51480671 ACTCTACCAACTTCTTCAGAG 58 NA Mus musculus 50 Fbln1 ENSMUSG00000006369 ENSMUST00000057410,ENSMUST00000109432 2 2 2 81 15 85068111 85068129 CACATGCCAGAAGAATGTG 59 85068174 85068903 CTCATCCACATCAACACAG 58 NA Mus musculus 50 Bcl2l1 ENSMUSG00000007659 ENSMUST00000089053,ENSMUST00000007803,ENSMUST00000109820,ENSMUST00000049893 3 4 4 60 2 152655672 152655690 CTCTCCTACAAGCTTTCCC 59 152655630 152655651 TCTCTTCGACATCACTAAACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Khsrp ENSMUSG00000007670 ENSMUST00000007814,ENSMUST00000065744 2 2 2 90 17 57164495 57164743 ATACAAAGTACAGCAAGCCT 59 57164424 57164442 AGATCCGTATTCATTGCGG 59 NA Mus musculus 50 0610009B22Rik ENSMUSG00000007777 ENSMUST00000007921,ENSMUST00000109098 1 2 2 61 11 51499436 51499454 TTCATAGCTCATGCTGCTC 59 51499393 51499411 TACATGTTGTTGGAGAGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Twist2 ENSMUSG00000007805 ENSMUST00000007949 3 1 1 60 1 93698539 93698560 GTACATAGACTTCCTCTACCAG 58 93698581 93698599 GCTGGTCATCTTATTGTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp422-rs1 ENSMUSG00000008686 ENSMUST00000008830 3 1 1 80 17 33379888 33380670 AGAGAAACTCGAGAATTCAGG 59 33379828 33379846 TCTGTTGGTGAGTCTTTCC 59 NA Mus musculus 50 Trpm5 ENSMUSG00000009246 ENSMUST00000009390 3 1 1 80 7 150259113 150259133 CTTGATTGCCAAATACATCGG 59 150258689 150259071 ATACAGTAGTTGGCCTGTG 58 NA Mus musculus 50 2310061C15Rik ENSMUSG00000014633 ENSMUST00000078589 1 1 1 85 8 119435034 119435052 CCTGCTAAAGGAATGTCAC 58 119417999 119418017 AACACTTCCTCATTTCCCG 59 NA DesignNoJunction Mus musculus 50 Pdcd2 ENSMUSG00000014771 ENSMUST00000054450 1 1 1 80 17 15659812 15659830 CGAATCCAAGGAAGATCAC 57 15658977 15659769 CTTCCATACCTGAGAATCTG 57 NA Mus musculus 50 Trappc2l ENSMUSG00000015013 ENSMUST00000015157 2 1 1 94 8 125137053 125137071 GAGAAGATCTCTGCCATGG 59 125137126 125137829 TACCCATATACCTTGTAGTCCT 59 NA Mus musculus 50 Edf1 ENSMUSG00000015092 ENSMUST00000015236 3 1 1 210 2 25415709 25416064 GACATCCAAGAAATGGGCT 59 25416506 25416524 ATAGTCTGCGATGACTTGC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Fbxw5 ENSMUSG00000015095 ENSMUST00000015239,ENSMUST00000100316 2 2 2 111 2 25359834 25359942 TCTCCTGATAACAGGTACCT 58 25360016 25360034 ACACCAGCAAGTCAATCTC 59 NA Mus musculus 50 Th1l ENSMUSG00000016253 ENSMUST00000109075,ENSMUST00000016397 2 2 2 80 2 174252066 174252085 ATATCCGCAAATGTCTGGAG 59 174252128 174252333 CGATGACATCCAGAACCTC 59 NA Mus musculus 50 Ada ENSMUSG00000017697 ENSMUST00000017841 2 1 1 139 2 163556080 163556098 GTTATCACACCATCGAGGA 58 163553973 163555756 ATTCTTGAAGCGAACAACC 58 NA Mus musculus 50 Akap1 ENSMUSG00000018428 ENSMUST00000018572,ENSMUST00000107904,ENSMUST00000107903 1 3 4 89 11 88701001 88701019 TTCTGAAGCAGACATCTGG 59 88700363 88700948 GCTGAGAGCCTTCTATGTG 59 NA Mus musculus 50 Ikzf1 ENSMUSG00000018654 ENSMUST00000065433,ENSMUST00000109673,ENSMUST00000095252 2 3 9 158 11 11600253 11607798 AAGTTTCAGGAAAGGAGAGC 59 11640964 11640982 AATCCCTAAAGCCATCAGC 59 NA Mus musculus 50 Unc45b ENSMUSG00000018845 ENSMUST00000108160,ENSMUST00000018989 1 2 2 80 11 82751284 82751303 ATGTTTGAGAACCATGACCA 59 82751344 82753699 CTCCTGAACCTCCTTATTGAG 59 NA Mus musculus 50 Ccdc12 ENSMUSG00000019659 ENSMUST00000019803 3 1 1 172 9 110612658 110613601 CCTGATTGGGATCTCAAGAG 59 110613824 110613842 ACATGTCAGTCAGAGTCAC 58 NA InUTR Mus musculus 50 Pah ENSMUSG00000020051 ENSMUST00000020241 2 1 1 85 10 86991083 86991104 GCTGTATCTCTGATATTCTCAC 57 86991149 87000903 AGGTTGATCTCATTCTCCTC 58 NA Mus musculus 50 Adora2a ENSMUSG00000020178 ENSMUST00000105420,ENSMUST00000020395 2 2 2 63 10 74795880 74795900 TCAGAAAGATGAGAACTCCAC 59 74795925 74795943 GTCCTCAAACAGACAGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mdm2 ENSMUSG00000020184 ENSMUST00000105263,ENSMUST00000020408 2 2 2 80 10 117128248 117128266 ACAGTCTATCAGACAGGAG 57 117127827 117128204 ACACTTCCAATAGTCAGCT 58 NA Mus musculus 50 Mgat1 ENSMUSG00000020346 ENSMUST00000081794 2 1 3 178 11 49059116 49074088 AAAGGTACATGGCTTCTTCC 59 49074229 49074247 CACAAAGATGATAGCACCC 58 NA DesignNoJunction, InUTR Mus musculus 50 Ube2b ENSMUSG00000020390 ENSMUST00000020657,ENSMUST00000109086 2 2 2 80 11 51802194 51804906 TCATCCAAATGTGTATGCTG 58 51802133 51802153 GAAGAGACATCATATGTGGGA 58 NA Mus musculus 50 Osbp2 ENSMUSG00000020435 ENSMUST00000070552,ENSMUST00000101633,ENSMUST00000101632,ENSMUST00000102950 3 4 4 82 11 3617153 3617172 ATACTGAGTACTTTGACGCC 59 3615545 3617108 CTCAGGCTTTCTGTCTTCC 59 NA Mus musculus 50 Trim11 ENSMUSG00000020455 ENSMUST00000108809 2 1 3 181 11 58795718 58802237 TACTGCAGGACATTAAGGA 57 58802470 58802488 GATCGATGTTAAGTCCTGG 57 NA InUTR Mus musculus 50 Mtif2 ENSMUSG00000020459 ENSMUST00000020749,ENSMUST00000093239,ENSMUST00000101423 3 3 3 80 11 29444402 29444923 TTTGGAAGGGATCATTAACC 57 29444966 29444984 TAAGACCACAGTCCATACC 57 NA Mus musculus 50 Butr1 ENSMUSG00000020490 ENSMUST00000108818,ENSMUST00000020792,ENSMUST00000069941 3 3 3 98 11 58732423 58732441 TTCATCTTCCTGCAACTCC 59 58732667 58732686 TTTGTCTTGACCAACTATGG 57 NA DesignNoJunction Mus musculus 50 Cenpo ENSMUSG00000020652 ENSMUST00000020981,ENSMUST00000058541 1 2 3 82 12 4215420 4216527 CAACTTGAGAGTGACTTCTG 58 4215357 4215375 TTATAGGTGAACGACAGCA 58 NA Mus musculus 50 Rnf135 ENSMUSG00000020707 ENSMUST00000017839 1 1 2 81 11 80007539 80010381 AGCGAGTTCAGGAAATGAC 59 80010425 80010444 GACAAGTGAGAAGCTTTCCT 59 NA Mus musculus 50 Ddx5 ENSMUSG00000020719 ENSMUST00000021062,ENSMUST00000106778 2 2 3 173 11 106645821 106646194 AGCTTATTCGTCTGATGGA 58 106645415 106645433 CATTTAGAACCCAGTCACG 58 NA DesignNoJunction Mus musculus 50 Rhbdf2 ENSMUSG00000020806 ENSMUST00000103028,ENSMUST00000103029,ENSMUST00000092408 2 3 3 130 11 116466473 116466569 CAAGATGCCCAAGATTGTG 59 116466361 116466379 CACTGGTGAAGGATGTGAG 59 NA Mus musculus 50 Kif1c ENSMUSG00000020821 ENSMUST00000102554,ENSMUST00000094499,ENSMUST00000072187 2 3 3 80 11 70518564 70518675 GTGGAAATAAGGCAAGAACC 59 70518717 70518736 AGACAATAGTAAAGACGGCA 58 NA Mus musculus 50 Nos2 ENSMUSG00000020826 ENSMUST00000018610 3 1 1 80 11 78735809 78735829 TACCAAAGTGACCTGAAAGAG 59 78735870 78742085 TATTGTTGGGCTGAGAACAG 59 NA Mus musculus 50 Cpd ENSMUSG00000020841 ENSMUST00000021201 2 1 1 80 11 76611127 76611147 AAAGACTTATCCGAGTTCCTG 59 76609123 76611085 AACACTCTGTCCCAAAGTG 59 NA Mus musculus 50 Dlg4 ENSMUSG00000020886 ENSMUST00000108589,ENSMUST00000108588,ENSMUST00000018700,ENSMUST00000108586,ENSMUST00000100956 2 5 5 84 11 69845216 69845234 GTTGTGTACCTAAAGGTGG 57 69845279 69852533 GAGAATATGAGGTTGTGATGTC 58 NA Mus musculus 50 2310004I24Rik ENSMUSG00000020910 ENSMUST00000072719,ENSMUST00000116364,ENSMUST00000116363 2 3 3 95 11 66851938 66853729 TGATTGTGAGCCATCTTCC 59 66851861 66851882 TGTGAGACCATATGATTGACAG 59 NA Mus musculus 50 Pole2 ENSMUSG00000020974 ENSMUST00000021359 1 1 1 80 12 70313974 70313993 AACTGGACCTTAGTAAAGCT 58 70312421 70313216 CTTCAAACCAACCTTCTGC 59 NA Mus musculus 50 Cdkl1 ENSMUSG00000020990 ENSMUST00000021377 3 1 1 87 12 70858282 70861100 CTGCCATAAACATAACTGCA 58 70858214 70858233 AAAGTCACAGAGCTTAATGG 57 NA Mus musculus 50 Six6 ENSMUSG00000021099 ENSMUST00000021519 2 1 1 64 12 74041427 74041445 GAACAGAAGACTCACTGCT 59 74041473 74041491 TCCTGAAGGTACCACTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sema4d ENSMUSG00000021451 ENSMUST00000021900,ENSMUST00000110040,ENSMUST00000110039 3 3 3 80 13 51798894 51800333 CCTCATGCCTGGATAAGAG 59 51798832 51798850 GGAAACATTTGAGTTCCGC 59 NA Mus musculus 50 Nsd1 ENSMUSG00000021488 ENSMUST00000084206 1 1 3 161 13 55340072 55340090 GCGAATACTACGTAGAGGC 59 55340215 55341912 GAAACCCTGTCTTATGCCT 59 NA Mus musculus 50 Txndc15 ENSMUSG00000021497 ENSMUST00000021959 3 1 1 81 13 55825935 55825954 GGCAAGGTTTAACCATACAG 58 55825997 55827044 TTTCTTGGCTTCTATACCCG 59 NA Mus musculus 50 Serf1 ENSMUSG00000021643 ENSMUST00000022145 2 1 1 80 13 100879018 100879037 AAAGACCCAGGAAATTAGCA 59 100879080 100883931 ATCTCTGAATCCCTCTGCT 59 NA Mus musculus 50 Aggf1 ENSMUSG00000021681 ENSMUST00000022189 3 1 1 81 13 96134686 96134706 GAGTGAGAAGAGCTATGATGG 59 96132893 96134645 TCTTTCCTCATCTTCATCGTC 59 NA Mus musculus 50 5730469M10Rik ENSMUSG00000021792 ENSMUST00000022317 1 1 1 84 14 41817387 41817405 GACATGTTTCTGTCCAAGC 59 41815808 41817339 TCCTTGGTTCTTTCTCCAG 58 NA Mus musculus 50 4930564B18Rik ENSMUSG00000022002 ENSMUST00000022579 3 1 1 81 14 76058741 76058759 TTTCAAGCAACATGCATGG 59 76058802 76063394 CTATCTTGGATTCATCTCCCA 58 NA Mus musculus 50 1110020G09Rik ENSMUSG00000022253 ENSMUST00000067760,ENSMUST00000100790,ENSMUST00000100789 3 3 3 83 15 9036541 9036559 TTTCAGTATTCGAGAGCCA 58 9036606 9037990 GAACGAACACAAACTTTGG 57 NA Mus musculus 50 E430025E21Rik ENSMUSG00000022350 ENSMUST00000022976,ENSMUST00000110129 2 2 2 80 15 59171466 59172459 GGCTATAATGAAGGTTGGAC 58 59171405 59171425 GAATCAAATCGACAGGAAGAG 58 NA Mus musculus 50 Slc38a4 ENSMUSG00000022464 ENSMUST00000023101 1 1 1 80 15 96843913 96843932 CTTACTGTGGCAATACTCTC 57 96843407 96843872 TTCATAGATTAGAGACCCTCC 57 NA Mus musculus 50 Ciita ENSMUSG00000022504 ENSMUST00000074090,ENSMUST00000023147,ENSMUST00000100187 2 3 3 80 16 10503809 10503966 AAGGACCTCTTCATAGAGCA 59 10504008 10504027 CTTCTGTCCTGCTTCTACAG 59 NA Mus musculus 50 Tfg ENSMUSG00000022757 ENSMUST00000065515,ENSMUST00000023440 3 2 2 91 16 56694590 56697579 GATTGAAGGTCAGATGTACCA 59 56694519 56694537 ACTGAACACCATACTGCTG 59 NA Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000113996,ENSMUST00000113993,ENSMUST00000113983 3 3 16 81 16 91854832 91854852 CTACTGAAAGTCCTGCTAGTC 59 91854895 91863514 ACCTGGGCAATTTCTTCTC 59 NA Mus musculus 50 Esx1 ENSMUSG00000023443 ENSMUST00000074698 3 1 2 84 X 133653336 133654122 GTGGAGATGGAGAACTCTC 58 133653270 133653288 CTCTTGAGGGTTCGAATCC 59 NA Mus musculus 50 D6Wsu116e ENSMUSG00000024104 ENSMUST00000036759 2 1 1 80 6 116196210 116196229 CTGAAGGTTGATAATGCCAG 58 116196271 116198005 TAAGAGTCCTTCCTTCTGTG 58 NA Mus musculus 50 Sox8 ENSMUSG00000024176 ENSMUST00000025003 2 1 1 195 17 25705812 25705830 ATGTACAAAGCTGATGCAG 58 25704889 25704907 TGCTGAAGTCGATGTTCTG 59 NA DesignNoJunction Mus musculus 50 Ccny ENSMUSG00000024286 ENSMUST00000053917,ENSMUST00000115867 3 2 2 80 18 9345244 9345262 AAATTTACCGGTTCGTTCG 58 9332939 9345200 CAAGGTATACCAGGGTGAC 59 NA Mus musculus 50 H2-M6-ps ENSMUSG00000024459 ENSMUST00000113667 3 1 1 111 17 37124868 37125460 GCTAAGAACAGATCCTCCC 59 37124775 37124793 GGTCAGGATGATGTTAGCA 59 NA Mus musculus 50 Cxxc1 ENSMUSG00000024560 ENSMUST00000025444 1 1 1 82 18 74379878 74380022 ATGCTAAGTATGAGAGCCAG 58 74380169 74380187 GACATCACAGAAGAGTCGG 59 NA Mus musculus 50 Rcl1 ENSMUSG00000024785 ENSMUST00000064393 1 1 1 80 19 29192822 29192840 GCTCCGTTTATGAAACACC 59 29192884 29195771 AAGAACATCAACCGAAGGG 59 NA Mus musculus 50 Sac3d1 ENSMUSG00000024790 ENSMUST00000113533 1 1 1 161 19 6116579 6117806 TACAACTTGGGTTCTGTGG 59 6116436 6116454 CTGTAGGTAGGGTAAGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ankrd1 ENSMUSG00000024803 ENSMUST00000025718 2 1 1 80 19 36191349 36192331 GCGATGAGTATAAACGGAC 58 36191287 36191305 CAGCCTCCATTAACTTCTC 57 NA Mus musculus 50 Kcnk7 ENSMUSG00000024936 ENSMUST00000052448,ENSMUST00000113613 1 2 2 96 19 5706457 5706713 CACTTCTTGGTTACTTGCTC 58 5706772 5706790 AAGAATTTCACCATGGCAC 58 NA Mus musculus 50 Cyp2c39 ENSMUSG00000025003 ENSMUST00000025968 2 1 1 152 19 39635350 39635369 CAAATCACATCCAACAAGCA 59 39635484 39638327 CCTGGACTTTAGCTGTGAC 59 NA Mus musculus 50 Tm9sf3 ENSMUSG00000025016 ENSMUST00000067800,ENSMUST00000025989 2 2 2 80 19 41309217 41309235 TGTCTATGCTGCTACATCG 59 41306948 41309175 TTTATCCATCTCCTTCCTCCT 59 NA Mus musculus 50 Dnmbp ENSMUSG00000025195 ENSMUST00000112037 2 1 2 89 19 43944086 43944659 GATCTCAAGAGCCTGTACC 59 43943431 43943450 ACGCATTATTCTCTGTACGG 59 NA Mus musculus 50 Fgf8 ENSMUSG00000025219 ENSMUST00000026240 2 1 4 217 19 45816163 45816412 GTTTCCCAACAGGTAACTG 58 45812690 45812709 GTATCGGTCTCCACAATGAG 59 NA DesignRelaxed Mus musculus 50 Slc6a20 ENSMUSG00000025243 ENSMUST00000026273 1 1 1 83 9 123516699 123516717 CTCATCATCTACCTGGTCC 58 123514059 123516652 CTGCTCAATCTTAGGTGTG 57 NA Mus musculus 50 Rabgef1 ENSMUSG00000025340 ENSMUST00000026390 1 1 1 86 5 130666906 130673832 CAAGAAGGAAATTCAGGAAGC 59 130673880 130673898 AACTCCTTAGTCACTCGGT 59 NA Mus musculus 50 Gusb ENSMUSG00000025534 ENSMUST00000026613,ENSMUST00000111308,ENSMUST00000026614 2 3 3 95 5 130475934 130476243 CTGACACCTCCATGTATCC 59 130475857 130475876 TATAGAGGACCACAGATCGA 58 NA Mus musculus 50 Hgs ENSMUSG00000025793 ENSMUST00000106205,ENSMUST00000106203,ENSMUST00000026900 2 3 3 104 11 120332824 120332842 ATCTTGTACCTGATCCAGG 58 120332909 120333927 GAAGACATGTCCTTCTACCT 58 NA Mus musculus 50 Boll ENSMUSG00000025977 ENSMUST00000087585,ENSMUST00000114423 3 2 2 80 1 55397363 55397381 CTTACCATAATGGCGTTGC 59 55380550 55397320 TAGATATGGAACGTGAAGGC 59 NA Mus musculus 50 Ndufa10 ENSMUSG00000026260 ENSMUST00000027478 2 1 1 81 1 94360985 94361004 ACACGCAGTCATCTATATCG 59 94359720 94360943 CTTCATTTCATGTGGATCTCC 58 NA Mus musculus 50 Rab7l1 ENSMUSG00000026433 ENSMUST00000112386,ENSMUST00000027693 2 2 2 85 1 133767363 133767381 ATGGAAACAGGATCTGGAC 58 133767430 133768653 ACAGATCACTCTTGTTGGC 59 NA Mus musculus 50 Atp2b4 ENSMUSG00000026463 ENSMUST00000112267,ENSMUST00000086485 1 2 5 112 1 135608297 135608315 GTTCCTAGCTCCTATTCCG 58 135603558 135608221 GTTTGACGACTCTGATTGC 59 NA Mus musculus 50 Pigc ENSMUSG00000026698 ENSMUST00000028021,ENSMUST00000111594 1 2 2 60 1 163901181 163901199 CATTATGGTGACGTTTGCT 58 163901221 163901241 CAGTTTCTTCTGTAACATGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nusap1 ENSMUSG00000027306 ENSMUST00000068225,ENSMUST00000028771 2 2 2 87 2 119469561 119469580 CCAAGTTCTAGTAAGAAGCC 57 119469630 119472837 GTTTCAGCTTTCCTTTGTG 57 NA Mus musculus 50 Tmem56 ENSMUSG00000028132 ENSMUST00000029777 2 1 1 86 3 120934230 120937968 AACTCAAGGGTAGTATCCAC 58 120934163 120934181 AGTTATAGTGGCCTCATCG 58 NA Mus musculus 50 Manba ENSMUSG00000028164 ENSMUST00000029814 3 1 1 81 3 135169958 135173948 TTAATCTCAGTGAATGGCAG 57 135173992 135174010 GTGACATTGTTGAACAGGA 57 NA Mus musculus 50 Cdh17 ENSMUSG00000028217 ENSMUST00000029871,ENSMUST00000108303 2 2 2 81 4 11731258 11734586 CTGACTGTGAGTTATTCACTG 58 11734627 11734647 CAGCACTAAATATCTCACCAG 58 NA Mus musculus 50 Ugcg ENSMUSG00000028381 ENSMUST00000030074 1 1 1 80 4 59231439 59232364 ATCCAGAATGATCAGGTGG 58 59232407 59232426 AAGCATTCTGAAATTGGCTC 59 NA Mus musculus 50 Hsdl2 ENSMUSG00000028383 ENSMUST00000030078,ENSMUST00000107528,ENSMUST00000107529 1 3 3 80 4 59609775 59609795 GGTCATATTCTCAATCTCAGC 58 59609836 59610145 TTTGGCAATGGTATAAGCAC 58 NA Mus musculus 50 Ccdc23 ENSMUSG00000028643 ENSMUST00000106345 3 1 3 89 4 118868601 118868619 AGCTGAAGCAAAGACAGAG 59 118871409 118873513 GAGAGCATAGATCTGAGGC 59 NA Mus musculus 50 Smarcd3 ENSMUSG00000028949 ENSMUST00000030791 2 1 1 80 5 24101294 24101550 CTTGGATGATCCTAGTAAGC 57 24101233 24101252 TAAAGGTCTTTGTCCAACTC 57 NA Mus musculus 50 Ugt2a2 ENSMUSG00000029268 ENSMUST00000031197,ENSMUST00000079811 1 2 2 81 5 87891150 87891923 GATCTTCTTGGACATCCCA 58 87891087 87891105 TCCCATGGTAAATAGCCTC 58 NA Mus musculus 50 Enoph1 ENSMUSG00000029326 ENSMUST00000031268 2 1 1 81 5 100491282 100492784 AGACATTCTTGAGCTCATCG 59 100492828 100492846 AGCAATCTTCCGGTAACTC 59 NA Mus musculus 50 Tpst2 ENSMUSG00000029344 ENSMUST00000071455,ENSMUST00000031287,ENSMUST00000112373 3 3 3 254 5 112737485 112738714 TCTCCTTGTCCAAGATCGA 59 112740728 112740746 ATCCTTTCAGATTGGCTGG 59 NA DesignRelaxed Mus musculus 50 St7 ENSMUSG00000029534 ENSMUST00000115419,ENSMUST00000052113,ENSMUST00000081635,ENSMUST00000000674,ENSMUST00000077080,ENSMUST00000053148,ENSMUST00000115417 3 7 7 177 6 17872066 17872085 TGCATTCTTTCATCTTGCAC 59 17880851 17884129 TTCATGGAAAGAGGGAAGC 59 NA Mus musculus 50 Lhx5 ENSMUSG00000029595 ENSMUST00000031591 3 1 1 142 5 120884709 120885363 GAAGTCTCAACTCGGTGTC 59 120885468 120885487 GTTCTGTTCCTCATTCTCGT 59 NA Mus musculus 50 Erc1 ENSMUSG00000030172 ENSMUST00000032279,ENSMUST00000071356 1 2 4 80 6 119723914 119728018 TCTTCAGTCTGAGATTGGC 58 119723852 119723871 TCTAGCTTTGTTTGTAAGGC 58 NA Mus musculus 50 Jarid1a ENSMUSG00000030180 ENSMUST00000100996,ENSMUST00000005108 2 2 2 80 6 120358307 120358326 AAGAATTGAAGGCCTTTGTC 58 120358367 120362182 CCAGCAGATTCTTTACTTGTC 58 NA Mus musculus 50 Rassf8 ENSMUSG00000030259 ENSMUST00000111704,ENSMUST00000032388 3 2 2 89 6 145765148 145765590 CAGACATAGAGACAGAGGC 58 145765640 145765661 GTAGAATACGAAGATTACTGGG 57 NA DesignRelaxed Mus musculus 50 C79127 ENSMUSG00000030402 ENSMUST00000032560 2 1 1 165 7 19863633 19863651 CTTTAGACGAAGCCCTGAG 59 19863333 19863352 GAGTAAGCTTCAGCAATGAC 58 NA DesignNoJunction Mus musculus 50 Tmem126b ENSMUSG00000030614 ENSMUST00000032843 3 1 1 81 7 97617661 97618089 TGGCAGTTAAGTATCAGACTG 59 97617600 97617619 ATCCCAGTTTGACAAAGGAG 59 NA Mus musculus 50 Klk10 ENSMUSG00000030693 ENSMUST00000014058 3 1 1 141 7 51038972 51038990 ATGATGCTGAAACTGAGCA 59 51039093 51039697 TATTGTACTTCACTCTTCGGC 59 NA Mus musculus 50 Cox6a2 ENSMUSG00000030785 ENSMUST00000033049 1 1 1 123 7 135349434 135349452 GAGTTCATCCCGTATCACC 59 135349242 135349260 ATCAAGGGTGCTCATAACC 59 NA DesignNoJunction Mus musculus 50 Mtcp1 ENSMUSG00000031200 ENSMUST00000033542,ENSMUST00000114081 2 2 2 69 X 72657015 72657033 CACCAAGAAGGAGTCTACC 58 72656852 72656982 AACTTGTCTCCTCTTCCAC 58 NA DesignRelaxed Mus musculus 50 Srpx2 ENSMUSG00000031253 ENSMUST00000113303,ENSMUST00000113304,ENSMUST00000033606 1 3 3 80 X 130460510 130460785 CCTGTATGTGTAGACATAGATCC 59 130460824 130460843 AGTTAGTTTCTCTGGCTCTG 59 NA Mus musculus 50 Glt28d2 ENSMUSG00000031286 ENSMUST00000033643 2 1 1 60 3 85675749 85675768 AATCATCAGTTTGAACTGGC 58 85675708 85675727 AGGTACAGTAGAAGAGATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Adcy7 ENSMUSG00000031659 ENSMUST00000098521 2 1 1 80 8 90848428 90848446 GAGACCTGAAGATCATGGT 58 90848487 90848667 AGTAGTCAATCTGTCTAGACAG 58 NA Mus musculus 50 Smad1 ENSMUSG00000031681 ENSMUST00000066091,ENSMUST00000109885 2 2 3 99 8 81873558 81873576 ACAATAAGAACCGCTTCTG 57 81867797 81873495 TAAAGGTGGACTCCTTTCC 58 NA Mus musculus 50 Smad1 ENSMUSG00000031681 ENSMUST00000066091,ENSMUST00000109885,ENSMUST00000066081 3 3 3 71 8 81895688 81895707 CACTATAAGCGAGTGGAGAG 59 81880322 81880340 CTGAGGATTGTACTCGCTG 59 NA DesignNoJunction Mus musculus 50 Katnb1 ENSMUSG00000031787 ENSMUST00000034239 3 1 1 80 8 97621656 97621866 GATATCAAGACATCAGTGGAC 57 97621907 97621926 CTGATTGACAATGTTCAGGA 57 NA Mus musculus 50 Tmem38a ENSMUSG00000031791 ENSMUST00000034244 1 1 1 103 8 75103524 75103542 TTTGGGAGTTACATCCTGG 58 75103609 75103867 ATCAAGTACCACACTCCAG 58 NA Mus musculus 50 Spata19 ENSMUSG00000031991 ENSMUST00000034473,ENSMUST00000067581 2 2 2 80 9 27205591 27207997 TTTATAAGATGGAGCCACAC 57 27208040 27208058 TTGATCTATTCGTTCCTGC 57 NA Mus musculus 50 Fez1 ENSMUSG00000032118 ENSMUST00000034630 2 1 1 81 9 36668415 36668436 GAAGAGTTCAATGAGAAGAGTG 58 36668478 36671094 TTTCCTCAATCACCTGGTC 59 NA Mus musculus 50 Eomes ENSMUSG00000032446 ENSMUST00000111763,ENSMUST00000035020 1 2 2 80 9 118391199 118391217 CAAGACTCAGACCTTCACC 59 118391261 118391364 TTTAGCTGGGTGATATCCG 58 NA Mus musculus 50 Tdgf1 ENSMUSG00000032494 ENSMUST00000035075 3 1 1 94 9 110845719 110845737 GATAACAGCATTTGGGACC 58 110845136 110845662 TTAAGCGACTTACTGTTCTG 57 NA Nonspecific Mus musculus 50 1700080E11Rik ENSMUSG00000032566 ENSMUST00000035180 1 1 1 150 9 105046811 105046829 TAACACTAGAGCAGCTCCA 59 105045894 105045913 CCAATGAAGGAATTCTCCAG 58 NA DesignNoJunction Mus musculus 50 Hemk1 ENSMUSG00000032579 ENSMUST00000035196 3 1 1 123 9 107238905 107238923 ATGTGGCCGTAGATTACAG 59 107233902 107238520 AACCAGTTCTTCTGTCTCTG 59 NA Mus musculus 50 Emr4 ENSMUSG00000032915 ENSMUST00000025004 3 1 1 80 17 55930768 55931192 ACACATACTTTGGGAGTACTG 59 55931233 55931252 CACTTTGCGAAGTAACTTGG 59 NA Mus musculus 50 Resp18 ENSMUSG00000033061 ENSMUST00000039534,ENSMUST00000067014 2 2 2 94 1 75270598 75270616 AACAGTCAAGGTGAACAGG 59 75268927 75270541 CAAAGAAACCCTTGGTAGGA 59 NA Mus musculus 50 Slc9a10 ENSMUSG00000033210 ENSMUST00000037005 2 1 1 128 16 45544853 45544871 TTGGTATCTGCAGTCTGTG 59 45544960 45547725 CTTCTAGAAAGACCAAGGTCTC 59 NA Mus musculus 50 AU040829 ENSMUSG00000033389 ENSMUST00000093002,ENSMUST00000093003,ENSMUST00000047463,ENSMUST00000093001 1 4 4 68 11 64870826 64870844 AACATTTAGCCAAGCTGGT 59 64866696 64866714 AAGACTTGGAAGTCTGCTG 59 NA DesignNoJunction Mus musculus 50 Pank1 ENSMUSG00000033610 ENSMUST00000036584,ENSMUST00000112460 2 2 2 104 19 34895708 34896215 CTGTAGCATCAAGCTTTGG 58 34895622 34895640 CAATGTTGTTGGTGATGGT 58 NA Mus musculus 50 Nrxn2 ENSMUSG00000033768 ENSMUST00000113459 1 1 6 89 19 6517248 6519266 GAACACAGATGACCTCCTG 59 6519318 6542350 GTAACAGCACCAGTACTAGG 59 NA Mus musculus 50 Cypt2 ENSMUSG00000033856 ENSMUST00000041758 1 1 1 60 X 102695761 102695779 AATGTCAATGTGTCTGAGC 58 102695803 102695821 TTGGAAATGGGTCACTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Igsf9b ENSMUSG00000034275 ENSMUST00000115247,ENSMUST00000098919,ENSMUST00000037531 2 3 3 110 9 27136194 27136213 GCTATATCATGGAGTTCCGA 58 27136285 27137136 CATACCAGGTATCCTGTGAC 59 NA Mus musculus 50 Cbl ENSMUSG00000034342 ENSMUST00000037644 1 1 1 80 9 43959810 43960881 GACCCTACAAACTTCAATGAG 58 43959750 43959769 TCGTTCTGAGTTGATTCTCC 59 NA Mus musculus 50 Uaca ENSMUSG00000034485 ENSMUST00000050183,ENSMUST00000058974 1 2 2 81 9 60697998 60698116 CAAAGATATAGACGGGCGG 59 60698160 60698179 TCTGTCTATCAGCAACTGAC 59 NA Mus musculus 50 Pib5pa ENSMUSG00000034570 ENSMUST00000044507 3 1 1 80 11 3401573 3401592 GTCACATCTCTTCTTCACCT 59 3401416 3401530 ATTGACTTCTTGCAACCCT 59 NA Nonspecific Mus musculus 50 Ly6d ENSMUSG00000034634 ENSMUST00000040404 3 1 1 77 15 74593196 74593214 TCCAACTTCTACTTCTGCA 58 74592975 74592993 GTTTGCACACTCTTTCCTC 58 NA DesignNoJunction Mus musculus 50 Pygo1 ENSMUSG00000034910 ENSMUST00000038489 2 1 1 108 9 72773759 72790736 GAGTTAGAGGTGGTGACAG 59 72790808 72792488 GGAAAGGAAGATCCCTGTG 59 NA Mus musculus 50 Ccdc98 ENSMUSG00000035234 ENSMUST00000055245,ENSMUST00000044535 2 2 2 84 5 101241214 101244191 ATGTCAGAAAGACTGTGGT 58 101241148 101241166 CTGTGGAGTAACTGCTCTC 59 NA Mus musculus 50 Aldh1b1 ENSMUSG00000035561 ENSMUST00000044384 2 1 1 60 4 45815717 45815736 GATAACGGGAAACCTTTCCA 59 45815758 45815777 ACACCTTGATGACTTCATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ky ENSMUSG00000035606 ENSMUST00000039390 1 1 1 80 9 102415355 102423626 CGACAACCAAGGTACTCAG 59 102423668 102423688 GCCAAAGAGAACTTCTTAAGC 59 NA Mus musculus 50 Muc4 ENSMUSG00000035656 ENSMUST00000096106 1 1 1 80 16 32752098 32752350 CTCCAAGTACAACACTGGT 59 32752393 32752412 TTTGGGAACTTGTCTCTGTC 59 NA Mus musculus 50 Ndufa3 ENSMUSG00000035674 ENSMUST00000039415 2 1 2 60 7 3569436 3569457 CACATTCAACTCAGTTTGACTC 59 3569477 3569496 TTTGCATAAGTCAGACTTCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1300018J18Rik ENSMUSG00000035757 ENSMUST00000082439 1 1 1 80 15 88923266 88923286 CGTGTTCTATGATGGTAATCC 58 88923326 88924575 GAGCCGAATCTTATGAAAGTG 59 NA Mus musculus 50 9930023K05Rik ENSMUSG00000035818 ENSMUST00000039666 3 1 1 83 19 56553015 56554296 TCATTGAGAACCTGTCTCC 58 56554343 56554361 TGACTCTGTCTGGAATTCC 58 NA Mus musculus 50 4732435N03Rik ENSMUSG00000036356 ENSMUST00000078350,ENSMUST00000110245 3 2 2 80 8 70882608 70885982 GACTTCATCAACATAGGTGGA 59 70882548 70882567 GAGATATTTCCGGTACAGGT 58 NA Mus musculus 50 Abpe ENSMUSG00000036521 ENSMUST00000038835 3 1 1 118 7 32088646 32088664 TTGATCCTACTGTGGAGGA 59 32088743 32089761 TGAGCTGAAGAGTATAGTTGTC 59 NA DesignNoJunction Mus musculus 50 Gtdc1 ENSMUSG00000036890 ENSMUST00000112810,ENSMUST00000049051,ENSMUST00000112813,ENSMUST00000112805 2 4 5 80 2 44426799 44430976 TTTGGAGTAGCAATGTTGG 57 44426737 44426756 AAAGATCTCAGGATAGACCA 57 NA Mus musculus 50 Lrg1 ENSMUSG00000037095 ENSMUST00000041357 1 1 1 61 17 56259493 56259511 ATCTGTGACAAGAACCTGG 59 56259450 56259468 AACATCTTGTTTCGGTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1700125F08Rik ENSMUSG00000037247 ENSMUST00000036304 3 1 1 203 10 60391553 60392081 CTAACCTAGCCTCATAATGTG 57 60391370 60391388 TGGAATGACAACTTGATGG 57 NA DesignNoJunction, InUTR Mus musculus 50 Ovol2 ENSMUSG00000037279 ENSMUST00000037423,ENSMUST00000110022,ENSMUST00000103171 2 3 3 124 2 144143626 144156647 AAATCAAGTTTACCACCGG 57 144143520 144143538 CCTCTTTACCTGGTTGTGG 59 NA DesignRelaxed Mus musculus 50 Phf16 ENSMUSG00000037315 ENSMUST00000115384,ENSMUST00000043693 2 2 2 81 X 20039305 20056646 GAAGTCTGCTGAGGTATTCC 59 20056687 20056708 ATAGCTGTCAGGATTAACATGG 59 NA Mus musculus 50 Neurod6 ENSMUSG00000037984 ENSMUST00000044767 1 1 1 60 6 55629622 55629641 TTAACACTACCGTTTGACGA 59 55629581 55629600 CAAACTTTCTGCACATCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2410066E13Rik ENSMUSG00000038065 ENSMUST00000046276 3 1 1 128 6 54639108 54648978 AAATCCTTCAGACCTTTGCT 59 54649069 54649087 AGTTTACTGCTGACTGACC 59 NA Mus musculus 50 Gstp2 ENSMUSG00000038155 ENSMUST00000042700 2 1 1 107 19 4040787 4040805 AGAATGACTACGTGAAGGC 59 4040530 4040716 CAAAGGAGATCTGGTCACC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Cer1 ENSMUSG00000038192 ENSMUST00000107238,ENSMUST00000048430 1 2 2 60 4 82530605 82530623 AGAGATCACCTCTACAGGA 58 82530563 82530581 CCCTTTCTGAACATGAACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Akr1d1 ENSMUSG00000038641 ENSMUST00000040987 1 1 1 87 6 37482631 37486034 CTTCTACTGTGGAAAGTTATGG 58 37486082 37486100 TAGTTTGAGGGCCTTTAGC 59 NA Mus musculus 50 BC026590 ENSMUSG00000038827 ENSMUST00000045368 3 1 1 80 4 56818561 56818580 AGTTTCTAACAGAGCTTGCA 59 56818620 56818760 CTCTAACACAGCTAGATATGGT 58 NA Mus musculus 50 Man2a2 ENSMUSG00000038886 ENSMUST00000098346 3 1 1 86 7 87503263 87503806 ATGGCTTTCAGATACAGCC 59 87503195 87503213 GGATATAGGCCATGACTGG 58 NA Mus musculus 50 E330034G19Rik ENSMUSG00000038925 ENSMUST00000041413 1 1 1 87 14 25127469 25127487 AAGAATATGGCCATCAAGC 57 25127537 25128672 GCTGCAATTTATCAAACCTC 57 NA Mus musculus 50 Rln1 ENSMUSG00000039097 ENSMUST00000044143 1 1 1 60 19 29406456 29406475 TCTCCATGATAAACTGGGTG 59 29406415 29406434 TTGCAAGTATTTAAGCCCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Il18 ENSMUSG00000039217 ENSMUST00000059081 3 1 1 91 9 50387518 50389606 CCTTTGAGGAAATGGATCCA 59 50389660 50389678 CATCTTGTTGTGTCCTGGA 59 NA Mus musculus 50 Tph1 ENSMUSG00000040046 ENSMUST00000107669,ENSMUST00000049298 1 2 2 80 7 53906309 53906327 GTGCAAACAAGATGGACAG 59 53905437 53906266 CCAGAAAGTGCATGTTTGAG 59 NA Mus musculus 50 Slc26a7 ENSMUSG00000040569 ENSMUST00000042221 1 1 1 80 4 14517512 14517530 GCTTATCCGAGTTTGAGCT 59 14492742 14517468 ACATGACCAGCTGAATCAC 59 NA Mus musculus 50 Hmgn1 ENSMUSG00000040681 ENSMUST00000050884 3 1 1 81 16 96343388 96343406 TTGTTGTGAGAGGTCTTGG 59 96343325 96343343 ACACAAATGAAGAGCTACG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 1110037F02Rik ENSMUSG00000040720 ENSMUST00000108307,ENSMUST00000059914,ENSMUST00000055372 3 3 3 81 4 11434210 11435059 TATGTCTTTGCCAGTGTCTG 59 11435103 11435121 CCTATCAGGAGAAATGGGC 59 NA Mus musculus 50 Rfwd2 ENSMUSG00000040782 ENSMUST00000076894 2 1 1 60 1 161238598 161238618 CACTGTTATACTATGGGATGG 57 161238640 161239022 TTCATGCTCCTGATAGACC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Pde9a ENSMUSG00000041119 ENSMUST00000047168 3 1 1 81 17 31580785 31580804 CGTTTAAGATCAACGAGCTG 59 31580846 31585324 TTAAGTCCTTCCAATTCCACC 59 NA Mus musculus 50 Cyyr1 ENSMUSG00000041134 ENSMUST00000114174,ENSMUST00000040094 1 2 2 159 16 85545167 85550297 GCTCTTTGTTTATGCAGGG 59 85465897 85465915 GAACACGATTCCAAACACG 59 NA DesignNoJunction Mus musculus 50 Spem1 ENSMUSG00000041165 ENSMUST00000045771 2 1 1 73 11 69635118 69635309 AGAAACCAGTACTTCACTTGG 59 69635065 69635083 ATCGAAGATGGACTTTGGG 59 NA DesignNoJunction Mus musculus 50 4933417O08Rik ENSMUSG00000042532 ENSMUST00000087123,ENSMUST00000049129 3 2 2 80 19 42341501 42341520 AGAATGAGAAGGTCTTTGCT 58 42341563 42342854 TGGAGATCTCGATAACCCT 59 NA Mus musculus 50 Olfr448 ENSMUSG00000043119 ENSMUST00000058668 1 1 1 60 6 42846922 42846940 CCACGTTGTTCTTATCCTG 58 42846961 42846982 GAAGAAGTGGTTGATTTCATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rfesd ENSMUSG00000043190 ENSMUST00000050997 3 1 1 81 13 76145611 76145629 TGTCCATGACAGAGAAGTG 58 76145455 76145566 CCCTCCAGAATGGTAACAG 59 NA Mus musculus 50 Morf4l1 ENSMUSG00000043223 ENSMUST00000077786 3 1 1 64 18 16147896 16147915 TTTGGTTCTTCGTCCTTCTC 59 16147939 16147960 ACTCTGTTATACACTAACGGTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rbm20 ENSMUSG00000043639 ENSMUST00000050565 2 1 2 102 19 53924664 53925670 ACAAGGACAAAGAAGGGAC 59 53925736 53925754 CTACTTCGTCCACTGTGAC 59 NA Mus musculus 50 Ccdc60 ENSMUSG00000043913 ENSMUST00000050178 3 1 3 81 5 116584083 116584102 CATAACAAAGATGAGGCACC 58 116581207 116584039 CAGCAGATCGAAGTACCAG 59 NA Mus musculus 50 2900011O08Rik ENSMUSG00000044117 ENSMUST00000056521 3 1 1 81 16 14094028 14094046 CCAGAAGATCCACAGACTG 59 14094090 14096009 TTCTTCCTGTTCCCTTAAGC 59 NA Mus musculus 50 Nhlrc1 ENSMUSG00000044231 ENSMUST00000052747 3 1 1 60 13 47109055 47109073 AGCCTATAATCACTCACGG 58 47109013 47109031 GAATTCTCCTTGGTGAAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Krt84 ENSMUSG00000044294 ENSMUST00000023720 3 1 1 83 15 101360068 101360086 CAAATCTGATCTGGAAGCC 58 101359211 101360021 ATCTCGATTTCCTCATGGT 58 NA Mus musculus 50 Q4VAB4-2 ENSMUSG00000044681 ENSMUST00000094937 2 1 1 132 5 28535665 28535683 TCAGACCTTTGAAATTCGC 58 28533811 28533829 ACATCAGACACAGTACCTG 58 NA DesignNoJunction Mus musculus 50 Megf8 ENSMUSG00000045039 ENSMUST00000085962 3 1 1 81 7 26145791 26148344 TGCTACAAGTACCAGTGTG 59 26148389 26148407 AGATGAGTCGGTAACACTG 58 NA Mus musculus 50 9930022D16Rik ENSMUSG00000045065 ENSMUST00000055404 2 1 1 60 11 109275445 109279247 CCAGAGCATCTTAATGTCCT 59 109279270 109279288 GCTACTTACAATGGTCCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1255 ENSMUSG00000045148 ENSMUST00000057369 2 1 1 87 2 89656489 89656507 ATGACACTGAACACATGGA 58 89656558 89656576 ACTACTTTCTGCATTTGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pigz ENSMUSG00000045625 ENSMUST00000052174 3 1 1 146 16 31942153 31942171 CACCCAGATGAATTCTTCC 57 31944424 31944442 TAACCAGAAGGTAGAGCCA 59 NA DesignNoJunction Mus musculus 50 Plekha7 ENSMUSG00000045659 ENSMUST00000106605,ENSMUST00000084664 2 2 2 81 7 123324002 123324695 GACCCAAGATTGTCAAGTC 58 123323939 123323957 GGAACATTAAGGTTCCTCC 57 NA Mus musculus 50 Eid2 ENSMUSG00000046058 ENSMUST00000059596 3 1 1 60 7 29053596 29053615 TAACGTTTACCATAGCCCTG 59 29053636 29053656 CCCAGTTCTTCTATTAGAGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mospd4 ENSMUSG00000046487 ENSMUST00000061488 2 1 1 60 18 46625067 46625088 GGAACTAATGGATTCGAAACTG 59 46625028 46625047 CAGTTTGTCACTTTCTGTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ckap4 ENSMUSG00000046841 ENSMUST00000053871 3 1 1 60 10 83991246 83991264 ATCAATGACAACATCGCCA 59 83991204 83991222 CATTGATCTCCTTCTGGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Irgm ENSMUSG00000046879 ENSMUST00000049519,ENSMUST00000097271 3 2 2 60 11 48680332 48680350 GGTCTACGGAATCAAGGAG 59 48680290 48680308 CACAAAGATGCTCACTGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mipol1 ENSMUSG00000047022 ENSMUST00000021358,ENSMUST00000101401 3 2 3 83 12 58408384 58408403 AAGACTGAAGCTTAAGTTGG 57 58408449 58426526 ACTTCTTCAACCAAAGCTG 58 NA Mus musculus 50 Ptgs1 ENSMUSG00000047250 ENSMUST00000062069 1 1 1 80 2 36093554 36093572 GTGAGCTACTATACTCGCA 58 36093615 36096129 TAACTGTTTCTTCCCTTTGG 57 NA Mus musculus 50 Nr1h4 ENSMUSG00000047638 ENSMUST00000058126 3 1 2 118 10 88946217 88946235 GTACAAGTGTAAGAACGGG 57 88943361 88946136 CAGTTAACAAACATTCAGCC 57 NA Mus musculus 50 D930020B18Rik ENSMUSG00000047642 ENSMUST00000058456 1 1 1 80 10 121121067 121122603 GACAGTCAGTTACAGAAGC 57 121122645 121122665 CTGAAAGATGAGCAGAATCTC 58 NA Mus musculus 50 AI132487 ENSMUSG00000048856 ENSMUST00000057026 3 1 1 89 12 110093820 110094158 GTCAGCCAGATGTCTTAGG 59 110094211 110094229 ACTTGATCACATCCATGGG 59 NA Mus musculus 50 4930429B21Rik ENSMUSG00000049507 ENSMUST00000057768 2 1 1 69 3 32265026 32265045 TACTTGTATAGTGGCTAGGG 57 32265077 32265095 TACTCTGCCGGTAATATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Defb20 ENSMUSG00000049560 ENSMUST00000061584,ENSMUST00000109836 2 2 2 60 2 152305243 152305262 TTGAGGAGACAGTCAAACTC 59 152305284 152305303 GTGGGCAGGATCATATAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Arl4c ENSMUSG00000049866 ENSMUST00000051236 1 1 1 80 1 90571040 90571155 AATTGAGAAACCCAGTCCC 59 90570978 90570998 CATCGTTGGAATTAACAGCTC 59 NA InUTR Mus musculus 50 Astl ENSMUSG00000050468 ENSMUST00000059839,ENSMUST00000089673 2 2 2 92 2 127168204 127169699 TTAACCAAGGGCTCATCTC 58 127171189 127171207 CTGACAACAATCGGAAAGG 58 NA Mus musculus 50 Sprr2f ENSMUSG00000050635 ENSMUST00000050397 2 1 1 76 3 92170052 92170070 CTTCAGCAGTCTTCAGGAC 59 92170110 92170128 AGGGAAGATAAGGTGTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Amigo1 ENSMUSG00000050947 ENSMUST00000106659 2 1 4 115 3 107990918 107990936 GAGTACAAGGAAAGTGCCT 59 107994636 107994654 TAGTTATAGAGCCCATGGG 57 NA DesignNoJunction Mus musculus 50 1700014D04Rik ENSMUSG00000051054 ENSMUST00000055343 2 1 1 60 13 59843709 59843730 AAGATAGAAACCACAGACTCAG 59 59843670 59843690 CTACATGTAAGAGGGTGAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 9630028B13Rik ENSMUSG00000051295 ENSMUST00000053934 3 1 1 62 1 187255827 187255848 ACTAGAGATTACAACTCCTGGA 59 187255786 187255804 TTCAAATATGACAGGCGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 E230016K23Rik ENSMUSG00000051832 ENSMUST00000063354 3 1 1 89 11 83435227 83435246 AGCAGAGAAACTAAGAAGGA 57 83435298 83436048 CTGGAGAAACTGTACAGGT 58 NA Mus musculus 50 OTTMUSG00000018795 ENSMUSG00000052281 ENSMUST00000064090 1 1 1 80 7 150174967 150175766 GCTGTCTGTCAGACTACAG 59 150174905 150174923 CACAGAGTGTCTGTACAGG 59 NA Mus musculus 50 ENSMUSG00000052389 ENSMUSG00000052389 ENSMUST00000064229 2 1 1 83 2 13479513 13479531 TAAGCTGGAGGATTCTTGG 58 13479578 13479596 GATCTTACCAATGACAGCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000052663 ENSMUSG00000052663 ENSMUST00000065022 1 1 1 60 19 38389701 38389719 TTGGAACACAACAATGCTG 59 38389659 38389677 CTTACCGAGTGGAGAAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mllt11 ENSMUSG00000053192 ENSMUST00000065482 3 1 1 61 3 95024308 95024326 CATCCCAGAACTGGATCTG 59 95024265 95024284 CGTAGGTAGGTGTATCTGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Atp6v1e2 ENSMUSG00000053375 ENSMUST00000065758 1 1 1 60 17 87344182 87344201 AGAGTTCAACATTGAGAAGG 57 87344141 87344160 ATAATCCATGATCTTCAGCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Phgdh ENSMUSG00000053398 ENSMUST00000065793 1 1 1 228 3 98137219 98138443 ATCCTAGTCATGAACACCC 58 98131975 98131993 TTCCAAAGGATTGCATTCG 58 NA DesignRelaxed Mus musculus 50 Mepe ENSMUSG00000053863 ENSMUST00000066207 1 1 1 78 5 104756150 104766109 CAATGCCGAATGAAGACAG 59 104766151 104766169 TCAGGATACACAGATGCTG 58 NA DesignNoJunction Mus musculus 50 Olfr234 ENSMUSG00000054036 ENSMUST00000050451 1 1 1 63 15 98328029 98328047 ATATCCTCATCGTGCTTGC 59 98328074 98328092 AGGAAGAAGTACATCGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1700041G16Rik ENSMUSG00000054822 ENSMUST00000068068 2 1 1 60 8 23918867 23918886 CCAAACAGAATCAGTTTGCC 59 23918907 23918927 CTTCTAGTCTCTGTAAGGAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp667 ENSMUSG00000054893 ENSMUST00000086327,ENSMUST00000108562 1 2 2 82 7 6245473 6245491 TATCATCGCCTTGTTGGAG 59 6245537 6256201 TAGACCCTGATTCAGGACC 59 NA Mus musculus 50 Apobec4 ENSMUSG00000055547 ENSMUST00000068875 1 1 1 60 1 154604052 154604070 GCAAAGCCTTACTTCACTG 59 154604094 154604112 CTTCTCGGTTCTGATTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Dennd1b ENSMUSG00000056268 ENSMUST00000094505,ENSMUST00000071518 1 2 3 80 1 141064264 141064283 CTCATAAGAGCCTAGATGGT 57 141064325 141065419 CAGAAGATATCTTGCTTGCC 58 NA Mus musculus 50 Lrrc48 ENSMUSG00000056598 ENSMUST00000094140,ENSMUST00000070805,ENSMUST00000108723,ENSMUST00000108722 3 4 4 93 11 60178527 60183984 TGATGAATATCATCTACCTGCG 59 60184037 60184056 AACATCTTGTACTCCTCTGC 59 NA Mus musculus 50 ENSMUSG00000056615 ENSMUSG00000056615 ENSMUST00000070201 2 1 1 60 1 182364068 182364086 TTCCACTCAGAGTATGACC 57 182364026 182364044 TTGGGATTCATTGTGTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr452 ENSMUSG00000057108 ENSMUST00000075468 3 1 1 60 6 42740648 42740668 CATTGTCTTGCTTATGACACC 59 42740687 42740708 GGAGATGATTTGAATGTAGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1415 ENSMUSG00000057464 ENSMUST00000071521 3 1 1 62 1 94387486 94387504 CTGTGTACACTGTCCTCAC 59 94387442 94387460 ACTCTTTGTTCCTTAGGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lepr ENSMUSG00000057722 ENSMUST00000102777,ENSMUST00000037552,ENSMUST00000106921,ENSMUST00000084387 3 4 4 81 4 101406194 101408175 CCAGCTAGGTGTAAACTGG 59 101408219 101408238 AGGTAATGGCTCCATATGAC 58 NA Mus musculus 50 Spna2 ENSMUSG00000057738 ENSMUST00000113719,ENSMUST00000113717,ENSMUST00000095083,ENSMUST00000100225,ENSMUST00000046257 3 5 6 156 2 29835721 29838696 GGACACGTTTAATGGAGCT 59 29838815 29839147 GTCACAATTGCTTCCTTGTC 59 NA Mus musculus 50 BC021614 ENSMUSG00000058216 ENSMUST00000076451 3 1 1 80 19 4057992 4058100 TATCGCCATATCCTGAAGG 58 4057930 4057948 CAGGAGAGTTTCAAATGGC 58 NA Mus musculus 50 Dock1 ENSMUSG00000058325 ENSMUST00000084488 1 1 1 80 7 142335510 142337102 CAAATCTGTCTTCATGGTAGAG 58 142337143 142337161 CTGCTGATCTTGTCATTGG 58 NA Mus musculus 50 Pip ENSMUSG00000058499 ENSMUST00000075351 2 1 1 89 6 41799915 41801446 GTATGGTGATCAAAGCTTACC 58 41801496 41801515 GATGATCATTACAGAGGCAG 57 NA Mus musculus 50 Olfr150 ENSMUSG00000058652 ENSMUST00000078557 2 1 1 60 9 39544768 39544787 TATGTCGCCATTTGTAATCC 58 39544809 39544828 AGGAACAGACTTGGTAAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr106 ENSMUSG00000059346 ENSMUST00000071795 1 1 1 60 17 37531549 37531568 CACCGAATTTCTCCTATTGG 58 37531589 37531609 GACAAACAGAATAGGGTTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Plg ENSMUSG00000059481 ENSMUST00000014578 2 1 1 80 17 12581460 12583090 CACGTACCCAACTACTCTC 59 12583133 12583152 TTCATCATTGTCTGGGTTCC 59 NA Mus musculus 50 Trp53 ENSMUSG00000059552 ENSMUST00000005371,ENSMUST00000108658,ENSMUST00000108657 2 3 3 129 11 69401124 69401873 TTATGTGCACGTACTCTCC 59 69401966 69401984 TTCTTGTAGATGGCCATGG 59 NA Mus musculus 50 Gm317 ENSMUSG00000059562 ENSMUST00000073277 3 1 1 89 17 25307507 25307528 GAAAGTATCTCCAACAAGTGTG 59 25307578 25307830 CTCAACCTCAAACTCCCTG 59 NA Mus musculus 50 Olfr960 ENSMUSG00000059867 ENSMUST00000077060 2 1 1 61 9 39431304 39431322 GGTTTCACAAATGTTGGTC 57 39431346 39431365 GTGTAGGACACAACAATGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 D10627 ENSMUSG00000059897 ENSMUST00000110216 1 1 2 85 8 71750619 71751750 TACCTGGAAGGCATAAAGG 58 71751799 71751817 ACCAATGTGACGTGTAGAG 59 NA Mus musculus 50 Sycp2 ENSMUSG00000060445 ENSMUST00000081134 3 1 1 80 2 178116597 178116615 AAAGAGAAATCCGACATCC 57 178115650 178116553 TGTAGTGATCTCATCCTGG 57 NA Mus musculus 50 Fpr-rs3 ENSMUSG00000060701 ENSMUST00000071189 2 1 1 60 17 20761421 20761439 AATCACCGAACTGTGAGTC 59 20761379 20761397 GCAGAGAAAGAATCCAAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxw12 ENSMUSG00000061701 ENSMUST00000079548 1 1 1 81 9 109128422 109128440 CTAACTGCCTGTTCTCCTC 59 109127015 109128378 GAGATATCGCCTACCAAGAC 59 NA Mus musculus 50 Ssxa1 ENSMUSG00000062814 ENSMUST00000072593 3 1 1 91 X 20696490 20696511 CCAGATTTCATGGAATCTAAGG 58 20696562 20698227 CTTCTGAGTCCTTGACTCTC 59 NA Mus musculus 50 Tas2r110 ENSMUSG00000062952 ENSMUST00000082014 3 1 1 60 6 132818923 132818941 TCATTTGTGCTGATTCTGG 58 132818964 132818983 AATGCAACACTGAAAGACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Slc1a1 ENSMUSG00000063205 ENSMUST00000081992 2 1 1 62 19 28980007 28983928 CTGTAATGCTGATGGTGAC 58 28979963 28979981 TTATTGCGCAACTGAATGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Bcl9l ENSMUSG00000063382 ENSMUST00000074989 2 1 1 155 9 44316375 44316394 GTCTCAGATGTCCAAGTACG 59 44316512 44316791 TTATTGCTGATACCTGGCC 59 NA Mus musculus 50 Olfr532 ENSMUSG00000063823 ENSMUST00000073226 3 1 1 60 7 147604897 147604915 CTCCACCATCATCTACACC 59 147604855 147604874 CTTGCTATTCTGGAAGGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mro ENSMUSG00000064036 ENSMUST00000025443 2 1 1 92 18 74033048 74036343 CTTACTGGATGATGAGGACG 59 74036398 74036416 AATTTCTTCCACCTCCACC 59 NA Mus musculus 50 Scgb3a1 ENSMUSG00000064057 ENSMUST00000043873 1 1 2 261 11 49477217 49477889 GGTGTTGCTTTCTTCATGG 59 49478476 49478494 CTCAACCGAACATTGTCAG 58 NA DesignNoJunction Mus musculus 50 mmu-let-7b ENSMUSG00000065564 ENSMUST00000083630 1 1 1 62 15 85537753 85537771 GGTGAGGTAGTAGGTTGTG 58 85537795 85537815 TGTATAGTTATCTTCGGAGGG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Krtap3-3 ENSMUSG00000069722 ENSMUST00000092700 1 1 1 99 11 99411866 99411884 CAACCTCACCACCTATGTG 59 99411785 99411803 ACTCTTTCGAAGACTGGTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Olfr1 ENSMUSG00000069823 ENSMUST00000092924 1 1 1 60 11 73208916 73208937 GAGGTGGTGATATTTATTGTGG 58 73208877 73208895 TGGTAATGAGTGCAAATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Trcg1 ENSMUSG00000070298 ENSMUST00000093837,ENSMUST00000093836 1 2 2 81 9 57095747 57095765 CTTCACCAAGACCTTGGAG 59 57095810 57095922 GACTGAGGTTAGCTGTCTC 59 NA Mus musculus 50 9030418K01Rik ENSMUSG00000070476 ENSMUST00000094251 3 1 1 93 2 178151436 178152217 TACTGCAGAGAAGACAATCC 59 178152273 178152291 TTTCTGATGACAGTCCCTC 58 NA InUTR Mus musculus 50 OTTMUSG00000010537 ENSMUSG00000070619 ENSMUST00000094526,ENSMUST00000105750 3 2 2 72 4 143952505 143952523 AACTTACTTCTTGCAGTGG 57 143952558 143952577 CCTAATCTGCAATTTCACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Lrrc8b ENSMUSG00000070639 ENSMUST00000112707,ENSMUST00000094548 2 2 2 64 5 105910946 105914839 ACATTGAGATGCTACCAGAC 59 105914866 105914884 TCTTCCCAGGAGTAGACAC 59 NA DesignNoJunction Mus musculus 50 Olfr1339 ENSMUSG00000070820 ENSMUST00000094832 2 1 1 60 4 118407275 118407293 TCATTGTCACCTTGATCCA 58 118407316 118407335 CTGAGGAAGAAGTACATGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000007987 ENSMUSG00000070891 ENSMUST00000094955 3 1 1 61 4 98962849 98962867 CAGACAATTACAATGGGCT 57 98962892 98962910 ATAGAGTCATTCGGTTGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1358 ENSMUSG00000071186 ENSMUST00000095474 2 1 1 60 10 77982850 77982868 TGCATGATCTTCTCCTCAC 59 77982892 77982910 TGTCACAGAAGAAGTGCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ccnf ENSMUSG00000072082 ENSMUST00000073425,ENSMUST00000115390 2 2 2 84 17 24363720 24367271 CATAAGAAGTGTTTCCACGA 57 24363655 24363673 ACTTATCCTCGAACCTCTG 58 NA Mus musculus 50 Ear2 ENSMUSG00000072596 ENSMUST00000074839 3 1 1 75 14 44680790 44680808 GAAATCCAAGTGGCTTGTG 59 44680847 44680865 ACAGTTATACGTACCCGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000058570 ENSMUSG00000072723 ENSMUST00000090634 3 1 1 84 14 8622586 8622607 GGTGGTAACTCTTCTCATAGAG 59 8621160 8622542 CTGTGAGGCCTTAATGAGAG 59 NA Nonspecific Mus musculus 50 ENSMUSG00000073129 ENSMUSG00000073129 ENSMUST00000101490 1 1 1 60 5 23957125 23957143 TTTCACTCAAGAGACCCTG 58 23957083 23957103 TCACTGGGAGATAAGAATTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC023829 ENSMUSG00000073139 ENSMUST00000114630,ENSMUST00000101506 1 2 2 81 X 67723346 67723365 GGTTGTGGAAGTTAATGGTC 58 67720528 67723302 CCTTCTGCTCGATACTGAG 59 NA Mus musculus 50 MGI:99543 ENSMUSG00000073245 ENSMUST00000101645 2 1 1 60 X 32955354 32955687 ATTGGACCTTATGGAAGTACAG 59 32955708 32955726 TTCAGGATTTGCATTCCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Hspa1l ENSMUSG00000073415 ENSMUST00000097339 3 1 1 61 17 35115693 35118401 TATCAAAGGTTCCCACCAG 58 35115650 35115669 GGATAAATGCAATGAGGTCC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 NP_796335.1 ENSMUSG00000073811 ENSMUST00000097990 1 1 2 121 4 88248747 88248765 ATCACTGTGTACCTGAGAG 57 88248194 88248662 TGTTCCTTCTCACTCAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073994 ENSMUSG00000073994 ENSMUST00000098254 3 1 1 61 7 107610696 107610715 TATCATTAACATTGCCGGAG 57 107610654 107610673 GCACTAGTGTGAAACTTACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 4930432M17Rik ENSMUSG00000074248 ENSMUST00000098646 2 1 1 81 3 121374286 121374304 ATGGACTTCAAACTGGAGC 59 121376928 121376947 CTAAGACAGGAGGTGTATGG 58 NA DesignNoJunction Mus musculus 50 I830077J02Rik ENSMUSG00000074342 ENSMUST00000098758 1 1 1 89 3 105730074 105730092 TTCCTCATTGTCAAGAGCT 58 105729505 105729792 TAAAGACGACAGTTTGGTG 57 NA Mus musculus 50 F730031O20Rik ENSMUSG00000074570 ENSMUST00000103073 1 1 3 93 2 172253411 172257736 AATGTCTGTTGGCAGAGTC 59 172257792 172257811 GTCTGCTATGCTTAGACAGG 59 NA Mus musculus 50 Olfr1213 ENSMUSG00000075111 ENSMUST00000099806 1 1 1 60 2 88813934 88813952 TCTACATTGCAACAGTTGG 57 88813892 88813910 GCACGACTACATATGATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1209 ENSMUSG00000075113 ENSMUST00000099809 3 1 1 60 2 88750349 88750369 CCTGTTCTACTTATCCTTGTC 57 88750309 88750328 AATTGTTCTTGGAGCTATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1079 ENSMUSG00000075179 ENSMUST00000111582 2 1 2 120 2 86380218 86382532 TGGAGATGTAACAAAGAAGC 57 86379033 86379051 TCAGTCACTACTGTGAGGT 59 NA DesignNoJunction, InUTR Mus musculus 50 AI790298 ENSMUSG00000075289 ENSMUST00000100021 2 1 1 60 19 4165747 4165765 GGCTCATCGAGATTAACCC 59 4165705 4165723 AGCTCTAGGATCCAGTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cyp3a41a ENSMUSG00000075551 ENSMUST00000094111 1 1 1 80 5 146516433 146517340 GATTCTAAGCAGAAGCACC 58 146516371 146516390 ATGAGAGTCTTTGTCTTTGG 57 NA Nonspecific Mus musculus 50 IGKV19-93 ENSMUSG00000076530 ENSMUST00000103331 1 1 1 60 6 68686426 68686445 AGGCTGCTCATACATTACAC 59 68686385 68686403 TTCCACTGAACCTTGATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-57-1 ENSMUSG00000076555 ENSMUST00000103356 2 1 1 130 6 69494647 69494841 TCAGTTGCAATGTCCAGAG 59 69494535 69494553 TACCAGTGCAAGTAACTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S4 ENSMUSG00000076714 ENSMUST00000103523 1 1 1 103 12 116396819 116396837 CTTCTGGCTACACCTTCAC 59 116396734 116396752 AGTACCACCATTGCTAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGLV3 ENSMUSG00000076939 ENSMUST00000103751 1 1 1 108 16 19241613 19241734 TTGCTCAGGTTCTTTCTCC 59 19241523 19241541 CGTACTGTGCTGACTACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 9930013L23Rik ENSMUSG00000078085 ENSMUST00000104886 1 1 1 60 7 91082563 91082581 TGCCACTGTCTTTACACTG 59 91082521 91082539 GAATTCCACAGTCATGAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Q3U188_MOUSE ENSMUSG00000078298 ENSMUST00000105094 1 1 1 68 15 64160175 64160193 GTTGTGTTGAGACCAACAG 58 64160125 64160143 CTATAGCCAGCTCACTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nkain1 ENSMUSG00000078532 ENSMUST00000105993 3 1 1 80 4 130160686 130162416 GGTATCTCATCCTGTATGCAG 59 130162458 130162476 CAACTTCCAGGTAGAAGCA 59 NA Mus musculus 50 EG545605 ENSMUSG00000078731 ENSMUST00000107998 1 1 1 77 4 42415814 42415832 CATGGAGACAGACTCTGAG 58 42415583 42415773 CTTCTCAGAGGACGTTCTG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 LOC623198 ENSMUSG00000079094 ENSMUST00000110599 3 1 1 80 5 147303413 147303432 TATCACCATATTTCTTGGCG 57 147303474 147304031 GATGCATACGTTCTCATCAG 58 NA Nonspecific Mus musculus 50 Ssxb1 ENSMUSG00000079705 ENSMUST00000037297 1 1 1 81 X 7993057 7993075 TGGAAACAGTGAGTTCCTG 59 7993120 7993593 ATATCCTGGAATGCCTTGC 59 NA Nonspecific Mus musculus 50 Map3k4 ENSMUSG00000079716 ENSMUST00000115691 2 1 1 106 17 12449531 12449636 TTTCTAGGTCCTTCCTCAG 57 12449706 12449724 ATCTGTCATCGAGATCAGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Tmem191c ENSMUSG00000079717 ENSMUST00000023451 3 1 1 70 16 17277194 17277212 AGAGTATCAGCCTTCAAGG 58 17277246 17277264 TCAAGAACCTGAAGTCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Amy2 ENSMUSG00000079850 ENSMUST00000098667 1 1 1 80 3 113152360 113152486 CGTCAAATCAGGAACATGG 58 113152298 113152317 GTTGCTGTTATTATCCCACC 58 NA Nonspecific Mus musculus 50 Myo18a ENSMUSG00000000631 ENSMUST00000108375,ENSMUST00000108376,ENSMUST00000000645,ENSMUST00000092884 1 4 10 80 11 77667384 77668188 TCATCAACAGTTTGCAGGA 59 77671232 77671250 CTGAGTCCACATCTGAGTC 59 NA Mus musculus 50 Oprm1 ENSMUSG00000000766 ENSMUST00000105607,ENSMUST00000056385,ENSMUST00000092734 2 3 21 63 10 3557391 3557409 CTTCCTGGTCATGTATGTG 57 3517620 3517638 AATGTAGATGTTGGTGGCA 59 NA DesignNoJunction Mus musculus 50 Pdzd4 ENSMUSG00000002006 ENSMUST00000114438 2 1 2 124 X 71043630 71069637 ACAAAGTGATGCTTCAGGA 59 71042223 71043542 GGGATTTACCTCTCCAACG 59 NA Mus musculus 50 Klf4 ENSMUSG00000003032 ENSMUST00000107619,ENSMUST00000003116 1 2 2 108 4 55542744 55542878 TTATCAAGAGCTCATGCCA 58 55542654 55542672 ATAGTCACAAGTGTGGGTG 59 NA Mus musculus 50 Sult2b1 ENSMUSG00000003271 ENSMUST00000075571 3 1 2 168 7 52997564 53014778 AATGTTTCCGAAATGAGCTG 59 52990705 52997433 AGTTGGTACCTGATTTGGG 59 NA Mus musculus 50 Rab3b ENSMUSG00000003411 ENSMUST00000106650,ENSMUST00000003502 3 2 3 90 4 108602054 108602073 TCGTGGGAAATAAGTGTGAC 59 108602126 108613243 AAGAAGTCAAACCCAAGCT 59 NA Mus musculus 50 Klc4 ENSMUSG00000003546 ENSMUST00000003641 3 1 2 96 17 46767686 46773947 ACAATCTGGCTCTTCTGTC 59 46767608 46767629 AAATATGTGGACCTGTAGTGAG 59 NA Mus musculus 50 Cd44 ENSMUSG00000005087 ENSMUST00000111199,ENSMUST00000111196 1 2 15 80 2 102693217 102693235 CCTACTGAACAGCCTACTG 59 102685551 102693174 GGTATTTGACTCCGTACTGG 59 NA Mus musculus 50 Slc1a2 ENSMUSG00000005089 ENSMUST00000111206 1 1 7 80 2 102601357 102617595 TGACTGTAAGGGATAGAATGAG 58 102617634 102617654 TGGAAAGGTGATAGACAATCC 59 NA Mus musculus 50 Cugbp1 ENSMUSG00000005506 ENSMUST00000005643,ENSMUST00000111449,ENSMUST00000111448 3 3 6 87 2 90853550 90856731 AGATCTTCTGATTCCTGCC 58 90856782 90856800 AAGAGACAGGGATTTGGAC 58 NA InUTR Mus musculus 50 Mobkl1a ENSMUSG00000006262 ENSMUST00000006424 1 1 2 110 5 89172394 89172412 AACTCTTAAAGCATGCGGA 59 89172485 89174090 AATCCACAGTGTTAACTGCA 59 NA Mus musculus 50 Elavl2 ENSMUSG00000008489 ENSMUST00000107120,ENSMUST00000107111,ENSMUST00000107109,ENSMUST00000107118,ENSMUST00000084426,ENSMUST00000107110,ENSMUST00000107116,ENSMUST00000102799,ENSMUST00000078179,ENSMUST00000008633,ENSMUST00000107124,ENSMUST00000107114,ENSMUST00000107113 1 13 13 121 4 90930777 90930795 AAACTTATACGTCAGCGGG 59 90927669 90930692 TTGATATGCCAGTGACCTG 59 NA Mus musculus 50 Tnpo3 ENSMUSG00000012535 ENSMUST00000115251,ENSMUST00000012679 2 2 2 80 6 29510216 29511372 AGTCATCCAGGAAATATGGC 59 29510155 29510174 CAACAACGCTCTACAATTCG 59 NA Mus musculus 50 Aph1a ENSMUSG00000015750 ENSMUST00000015894,ENSMUST00000056710 3 2 2 88 3 95699692 95699710 TCTTTGATGCCTGTGAGAG 59 95699762 95700171 GTTCAGGAATGTCAGTCCC 59 NA Nonspecific Mus musculus 50 Abr ENSMUSG00000017631 ENSMUST00000108408,ENSMUST00000072740,ENSMUST00000108407,ENSMUST00000094012,ENSMUST00000040910,ENSMUST00000065028,ENSMUST00000039558 3 7 7 80 11 76237580 76237599 GGCATCTACAGGATATCAGG 59 76236668 76237539 TAGGATGTCCTTGTTATTGGC 59 NA Mus musculus 50 Myo1b ENSMUSG00000018417 ENSMUST00000018561,ENSMUST00000046390,ENSMUST00000114537,ENSMUST00000114541 1 4 4 80 1 51831207 51831225 TGAGCTAGAGATTCCTGTG 58 51830216 51831163 AGTTGGAATAATGTCCGTG 57 NA Mus musculus 50 2810408A11Rik ENSMUSG00000018570 ENSMUST00000108621 2 1 4 142 11 69711804 69711822 AAGGAAGGTATCTGAGGTC 57 69710986 69711083 AGCTTTCATCCACTTAACC 57 NA Mus musculus 50 Rad51l3 ENSMUSG00000018841 ENSMUST00000018985,ENSMUST00000092844,ENSMUST00000021033,ENSMUST00000100718 3 4 4 60 11 82692695 82692714 AGTATGTCTGACCAAGTCTC 58 82692493 82692512 CCCAATGTCTATCATCTCCT 58 NA DesignNoJunction Mus musculus 50 Atp6v0a1 ENSMUSG00000019302 ENSMUST00000100436 2 1 4 117 11 100909733 100909751 GAACTCTCAACTTTGGTGG 58 100909832 100910330 TTCCTCTCAGTCTCTTCTG 57 NA Mus musculus 50 Calr3 ENSMUSG00000019732 ENSMUST00000109974,ENSMUST00000019876 3 2 3 86 8 74948648 74949677 GGAGAAACTAAGGGTCCAG 58 74948580 74948599 ATCCTCCTCATCTTCTTCAC 58 NA Mus musculus 50 2410017P07Rik ENSMUSG00000019813 ENSMUST00000105505,ENSMUST00000105504,ENSMUST00000019951 2 3 3 89 10 41439702 41441370 AAGACAGTGTCCGTAAACTG 59 41439632 41439652 TCTTAGATCCTTTAGGGTTGC 59 NA Mus musculus 50 Cnot2 ENSMUSG00000020166 ENSMUST00000105266 3 1 5 149 10 115965003 115974292 GAAAGAAGTTGCACAGGTG 59 115954429 115964891 GATGCCAGCATATCTTTCTC 58 NA Mus musculus 50 Grb10 ENSMUSG00000020176 ENSMUST00000109654,ENSMUST00000109656 2 2 6 137 11 11867643 11867662 TAAGAACTGCATCTCTTCCG 59 11851653 11867543 CTTTGACATCATGCTTGGC 59 NA Mus musculus 50 OTTMUSG00000005491 ENSMUSG00000020401 ENSMUST00000063166 3 1 1 60 11 46218666 46218685 CAAAGACTTTAGAGCTCACC 58 46218707 46218726 TCGTGAACAGAGATCTTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ankrd36 ENSMUSG00000020481 ENSMUST00000109856 2 1 4 80 11 5562522 5587305 CTGAGACAGTTTCACAATCTG 58 5587346 5587365 AAACTGAAGCTTTACGACCA 59 NA Mus musculus 50 Tom1l1 ENSMUSG00000020541 ENSMUST00000020849,ENSMUST00000107868 2 2 4 83 11 90532511 90534161 TTAGTCCCAGAACAGATCG 58 90532446 90532466 CATCAATATGGCTGTCATCAC 59 NA Mus musculus 50 Rffl ENSMUSG00000020696 ENSMUST00000074515,ENSMUST00000071152,ENSMUST00000108173,ENSMUST00000108172,ENSMUST00000108171,ENSMUST00000093975,ENSMUST00000021036,ENSMUST00000103218,ENSMUST00000108169 3 9 9 100 11 82623578 82623596 TCAACTATAAGGGCTGCTG 59 82622025 82623514 TTCATTACCAGACACCAGG 58 NA Mus musculus 50 2010111I01Rik ENSMUSG00000021458 ENSMUST00000091560,ENSMUST00000021911 2 2 2 88 13 63162547 63169413 GACTTGAGGTATGATAACACCT 59 63169462 63169480 TAAGGAATGATGTCCTGGG 58 NA Mus musculus 50 Cast ENSMUSG00000021585 ENSMUST00000109613,ENSMUST00000065629 2 2 5 182 13 74936125 74936145 GGATCATCTTCTAAACCAGGA 58 74885683 74891769 TTTCACAGCCTTAGTCTCTG 59 NA Mus musculus 50 Ankra2 ENSMUSG00000021661 ENSMUST00000022164 2 1 2 171 13 99036484 99037286 AAAGCTGAGTGCAATATCCA 59 99037417 99038393 CAGACAGAGAATTTGCTAACAG 59 NA Mus musculus 50 Rgnef ENSMUSG00000021662 ENSMUST00000109426 3 1 2 153 13 98847265 98915515 CCTCTTTATGGACAGAAGAC 57 98847131 98847149 GAATGCTAGATTGGAGGAC 57 NA Mus musculus 50 Ktn1 ENSMUSG00000021843 ENSMUST00000111743 1 1 6 137 14 48344609 48344628 AATTAAAGCTGACGAGTCTC 57 48345982 48350031 TTTAACTGTGTCTTGAGCTC 57 NA Mus musculus 50 6330409N04Rik ENSMUSG00000021930 ENSMUST00000100496 2 1 2 99 14 62164591 62164609 GGTGATGAGAAATGACGGA 59 62154070 62164529 TGTCGTCAACACTACATCTC 59 NA Mus musculus 50 Rnasen ENSMUSG00000022191 ENSMUST00000022802 3 1 2 134 15 12763708 12772215 GCGCAGTATCAATATGAGC 58 12775849 12775867 ATACAAATCACGGAGCCTG 59 NA Mus musculus 50 Ttll1 ENSMUSG00000022442 ENSMUST00000109481,ENSMUST00000016897,ENSMUST00000109480 2 3 4 118 15 83319988 83320006 CAACCTGATTAACGACACC 58 83314733 83319906 CCTCGTCATACAGGATCTC 58 NA Mus musculus 50 Rabl2a ENSMUSG00000022621 ENSMUST00000023294,ENSMUST00000094056 1 2 3 113 15 89414421 89414711 TGCAGACATACAGATGACTC 59 89414100 89414346 GCATCATTGAAGAGCTTCAC 59 NA Mus musculus 50 Pvrl3 ENSMUSG00000022656 ENSMUST00000023335 2 1 3 97 16 46436470 46436488 TCAGAAAGACCTTCTTGGC 59 46395373 46396199 TAATTGGTCCATTAGAGGGC 59 NA Mus musculus 50 St3gal6 ENSMUSG00000022747 ENSMUST00000064549,ENSMUST00000114357,ENSMUST00000114358 2 3 3 80 16 58486601 58489025 TCTTCTGAGATTTCCTCAGC 59 58486540 58486558 TTATTGGTACCGGACATGG 59 NA Mus musculus 50 4930451C15Rik ENSMUSG00000022759 ENSMUST00000065125 2 1 3 168 16 17552278 17552297 TAATGGCTTTGGAGACTCTG 59 17549480 17549882 CCAGCAAACAATAAGAATCCG 59 NA Mus musculus 50 Serinc2 ENSMUSG00000023232 ENSMUST00000105996,ENSMUST00000075677 2 2 2 80 4 129940873 129940891 AATTCCTGATCCTTGTGGG 59 129940395 129940831 CAAAGTAGAACCAGATCTTGG 58 NA Mus musculus 50 Galnt14 ENSMUSG00000024064 ENSMUST00000112591 1 1 2 115 17 73857252 73858880 GAGACCCTTTGGAAACTCC 59 73857155 73857173 CTGTAGGTGATTCCACTGG 59 NA Mus musculus 50 Crim1 ENSMUSG00000024074 ENSMUST00000112503,ENSMUST00000024876,ENSMUST00000112498 1 3 3 80 17 78750229 78754303 ACAGTGTACAGATGACCCT 59 78754347 78754365 TCTCCTTCATCATTCCTGC 59 NA Mus musculus 50 Prepl ENSMUSG00000024127 ENSMUST00000064592,ENSMUST00000072406 2 2 2 80 17 85480606 85481325 CAAAGACGAAGAAGCTGAC 58 85480544 85480562 TCAATGAAAGGCTGATCCA 58 NA Mus musculus 50 Cul2 ENSMUSG00000024231 ENSMUST00000025073,ENSMUST00000115872 2 2 3 80 18 3431518 3431537 ATGAGCTTCAGCAGTAAGAG 59 3431579 3434856 TGACTGGCTGATTACTTGTG 59 NA Mus musculus 50 2610110G12Rik ENSMUSG00000024426 ENSMUST00000061052,ENSMUST00000077494,ENSMUST00000025296,ENSMUST00000056034 2 4 5 180 17 36041246 36041264 TCTTTGAAGGCTTCTTTGC 58 36038547 36038937 ACCTTCAGGAATTCTCTGTC 59 NA Mus musculus 50 Megf10 ENSMUSG00000024593 ENSMUST00000115370 2 1 2 82 18 57420869 57421649 ATGTATCTGTAAGGCAGGC 59 57421695 57421713 TTAGGTTACAGCCAAAGCC 59 NA Mus musculus 50 Ehd1 ENSMUSG00000024772 ENSMUST00000099884,ENSMUST00000025684 3 2 2 82 19 6297687 6298081 GTAAGATGCAGGAACTCCT 58 6298127 6298145 ATCATCCACTGTATCCAGC 58 NA Mus musculus 50 Mark2 ENSMUSG00000024969 ENSMUST00000032557 3 1 4 100 19 7355741 7357229 AATGGTAAAGACAGCACAG 57 7355659 7355677 GGGAAATTAGTTCGGTCTG 57 NA Mus musculus 50 Pfkfb4 ENSMUSG00000025648 ENSMUST00000026738 3 1 3 126 9 108919630 108927570 GAATTCAAAGGCGTCTGTG 59 108927660 108930046 GGTCTTCATAGGACTCACC 58 NA Mus musculus 50 Zfp282 ENSMUSG00000025821 ENSMUST00000061890,ENSMUST00000114591 3 2 2 121 6 47842960 47847818 AGAATCCATCACTGACTCC 58 47847901 47847921 TAGGATCTGTGGGAATATCTC 57 NA Mus musculus 50 Sntg1 ENSMUSG00000025909 ENSMUST00000115484 2 1 3 199 1 8455616 8460493 ATATAGTCTACATGGGCTGGT 59 8438205 8453484 GTCACTGTCCTTGAGAACC 59 NA Mus musculus 50 Crygf ENSMUSG00000025945 ENSMUST00000027082 3 1 1 71 1 65973423 65973441 GGTTTCAGTGACTCTGTCC 59 65974556 65974574 CTCGTAGATCCTGATCCTG 58 NA DesignNoJunction Mus musculus 50 Gls ENSMUSG00000026103 ENSMUST00000114510,ENSMUST00000027273 3 2 3 104 1 52244632 52245534 GGTGATCAAAGGCATTCCT 59 52244546 52244564 GTCACTTGACTCAGGTGAC 59 NA Mus musculus 50 5230400G24Rik ENSMUSG00000026150 ENSMUST00000073025 2 1 3 92 1 82732075 82743668 GATTCCATACCTGTGTTGC 58 82747100 82747119 TGCATCTAGGTTTGAAATGC 58 NA Mus musculus 50 Epb4.1l5 ENSMUSG00000026383 ENSMUST00000052404 2 1 2 80 1 121446583 121447106 TTATTCCACAGAGTGCTACC 59 121446522 121446542 TCTGACTACATTCATCTGTCC 58 NA Mus musculus 50 Chit1 ENSMUSG00000026450 ENSMUST00000112256,ENSMUST00000086475 1 2 4 80 1 136047174 136047692 AGGAACTAAATCTTCCATCCG 59 136047734 136047752 GCTCTGGCATAGAAGATGG 59 NA Mus musculus 50 Fcgr2b ENSMUSG00000026656 ENSMUST00000027966 3 1 3 102 1 172893525 172893543 GTAGGTGAGTACAGACAGC 59 172891350 172893460 GATCAGGAGGATTGTATGGG 59 NA Mus musculus 50 Slc25a25 ENSMUSG00000026819 ENSMUST00000113310,ENSMUST00000113305,ENSMUST00000113307,ENSMUST00000113308 2 4 6 116 2 32275932 32276839 GAGAAGATTCTTAAGAGCATGG 58 32275837 32275855 CCAGTACAGGATGATCTCC 58 NA Mus musculus 50 Ralgds ENSMUSG00000026821 ENSMUST00000113894,ENSMUST00000028170,ENSMUST00000113893,ENSMUST00000100241,ENSMUST00000113892 1 5 5 80 2 28403129 28403641 GACTATCTCTATGGGAGACTG 58 28403921 28403939 CTGTAGCAACTTGATCTGG 57 NA Mus musculus 50 Acvr1 ENSMUSG00000026836 ENSMUST00000112599,ENSMUST00000090935,ENSMUST00000112601,ENSMUST00000056376 3 4 5 80 2 58311344 58311363 TAAGAGGGTCGATATTTGGG 58 58300843 58311303 TCTTCCACTATACCATTGCTC 59 NA Mus musculus 50 Camsap1 ENSMUSG00000026933 ENSMUST00000114167,ENSMUST00000061377,ENSMUST00000114164,ENSMUST00000097831,ENSMUST00000091268 1 5 5 80 2 25821341 25822221 GGCACCTATTAAGATGAGTG 57 25821280 25821298 TCAATGCTGATCATCTCCA 58 NA Mus musculus 50 Adal ENSMUSG00000027259 ENSMUST00000028702,ENSMUST00000066155 1 2 3 80 2 120971787 120971806 AAGGAATTTGCAGATGATGG 58 120971849 120973987 CCTAGTCATTCCAGTAGCA 58 NA Nonspecific Mus musculus 50 Atp9a ENSMUSG00000027546 ENSMUST00000109177,ENSMUST00000109176,ENSMUST00000109171,ENSMUST00000029060,ENSMUST00000109175,ENSMUST00000109170 2 6 6 60 2 168466163 168466181 TGTGTTCTACTTTGCATCC 57 168465481 168466141 GGTAGAATACCCAATGATCAG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Nkain4 ENSMUSG00000027574 ENSMUST00000103053,ENSMUST00000108870,ENSMUST00000108869,ENSMUST00000029091 2 4 5 89 2 180670709 180670727 TTCATTGGTGGATTTGACC 57 180669725 180670656 TTATGCAGGCAAATATGCC 58 NA Mus musculus 50 Epb4.1l1 ENSMUSG00000027624 ENSMUST00000103137,ENSMUST00000109577,ENSMUST00000109571,ENSMUST00000029155,ENSMUST00000103136,ENSMUST00000088565,ENSMUST00000103135 3 7 12 90 2 156350944 156350962 AGCCAAGAGGATGAATCTG 59 156351015 156352634 CTTTCACAGACTCAAACTGG 58 NA Mus musculus 50 2610304G08Rik ENSMUSG00000027651 ENSMUST00000109517,ENSMUST00000109519,ENSMUST00000029180,ENSMUST00000103123,ENSMUST00000099135,ENSMUST00000109518 1 6 6 81 2 157873698 157873716 AGAGGAGGAAGATGATGAC 57 157873759 157875837 GATTAACTCCTCAGTCAAGAG 57 NA Mus musculus 50 Rnpc3 ENSMUSG00000027981 ENSMUST00000092154,ENSMUST00000106536,ENSMUST00000106535 3 3 3 82 3 113322997 113323016 TTACCAGATGAGGATGAGGA 59 113319783 113322952 CTGTTCATTCTCTGTCGGT 59 NA Mus musculus 50 Lrat ENSMUSG00000028003 ENSMUST00000029632 2 1 1 60 3 82707255 82707274 GACATCCTAGTCAATCACCT 58 82707214 82707233 CCTCCTCATTGAGTAAGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rrh ENSMUSG00000028012 ENSMUST00000078035 3 1 3 98 3 129518226 129518244 ATACATGTCTTGTACCGCA 58 129516255 129518167 GTCCTGCATAAATATCCATCTG 58 NA Mus musculus 50 Casp8ap2 ENSMUSG00000028282 ENSMUST00000108177,ENSMUST00000108178 3 2 3 177 4 32718807 32718825 GCAGCAAATGAAAGACCTG 59 32721853 32735014 CCGGTCATCATTTCTTTGG 58 NA Mus musculus 50 4930417M19Rik ENSMUSG00000028457 ENSMUST00000107942,ENSMUST00000056010,ENSMUST00000102953 1 3 5 80 4 43304589 43315457 GACAGAAGGAAGAAGAGGA 57 43315501 43317531 TGGAATTGTCCGGATACTC 58 NA Mus musculus 50 Pde4b ENSMUSG00000028525 ENSMUST00000106911,ENSMUST00000030251,ENSMUST00000106908,ENSMUST00000106904,ENSMUST00000097950,ENSMUST00000097949 2 6 9 94 4 102275298 102275316 GAGACAAAGAACGGGAGAG 59 102275372 102277596 GTAGTCAATGAAACCAACCTG 59 NA Mus musculus 50 Pde4b ENSMUSG00000028525 ENSMUST00000106911,ENSMUST00000030251 3 2 9 159 4 101867534 101867553 TGTTCAGGAAACTTACAGCT 59 101867675 102159829 TTTCCACATCAAAGCACTC 58 NA Mus musculus 50 0610037L13Rik ENSMUSG00000028608 ENSMUST00000106727,ENSMUST00000030347,ENSMUST00000030346,ENSMUST00000106725 3 4 5 75 4 107565991 107566009 TTGAACCAGTTGACTTCCA 58 107567509 107567527 ATGTCACTGAAGACTGTCC 58 NA DesignNoJunction Mus musculus 50 Pomgnt1 ENSMUSG00000028700 ENSMUST00000106498,ENSMUST00000106496,ENSMUST00000079561,ENSMUST00000079267,ENSMUST00000106494 1 5 5 81 4 115824470 115824488 AAGTTGATCCTGGACACTC 58 115824533 115824693 CTAGGGCCTCATCATAGTC 58 NA Mus musculus 50 Espn ENSMUSG00000028943 ENSMUST00000105659,ENSMUST00000030785,ENSMUST00000084114,ENSMUST00000070018,ENSMUST00000080042,ENSMUST00000105657 1 6 13 233 4 151508544 151509593 GATCGAATCGAGGGATTCC 59 151508329 151508347 TATTCAGATGCAGTCCCAC 59 NA DesignRelaxed Mus musculus 50 Acox3 ENSMUSG00000029098 ENSMUST00000114237,ENSMUST00000068947,ENSMUST00000114235,ENSMUST00000068563,ENSMUST00000114238 1 5 5 80 5 35932371 35932390 TGAGTCATGGGAGTAATACC 58 35932430 35934743 GGGAATGTAAGATGAATTCCTG 58 NA Mus musculus 50 Rsrc2 ENSMUSG00000029422 ENSMUST00000050827,ENSMUST00000057795,ENSMUST00000111515 1 3 3 89 5 124189563 124189581 AAGGATCAGAACTCGTTCC 58 124186682 124189512 TTTCTATCTCGACTTCGACTC 59 NA Mus musculus 50 Tpk1 ENSMUSG00000029735 ENSMUST00000067888,ENSMUST00000114644 1 2 3 94 6 43438966 43473897 TACTACACCAAGAAGGGCT 59 43438890 43438909 TCTATCTTCCTTTGGAGCAC 59 NA Mus musculus 50 Gfpt1 ENSMUSG00000029992 ENSMUST00000032057 1 1 3 87 6 87010569 87010589 TCACATTCCGATTCTGTACAG 59 87010822 87013812 TTTCTTGTCTTTGCCTCGT 59 NA Mus musculus 50 Uba3 ENSMUSG00000030061 ENSMUST00000032142 3 1 2 81 6 97153518 97153538 GGAACCATGTAAAGAAGTTCC 58 97149305 97153475 CCAGATAATGCTTCAGTGC 58 NA Mus musculus 50 Nup210 ENSMUSG00000030091 ENSMUST00000113509,ENSMUST00000032179 2 2 3 80 6 91003604 91003622 TCTCGTAGAGGATGTGAGG 59 91003451 91003561 GTGATGTAGAGTTCCACCTG 59 NA Mus musculus 50 Ift122 ENSMUSG00000030323 ENSMUST00000112925,ENSMUST00000038234 1 2 3 84 6 115870398 115870416 AACCCTCTTCAACATCTCC 58 115870461 115873296 GAAGAGTGTATTCACTTTGGAG 58 NA Mus musculus 50 Tspan9 ENSMUSG00000030352 ENSMUST00000112173,ENSMUST00000032503,ENSMUST00000112171 3 3 3 109 6 127917102 127917121 AGAACAAGTGTCTGCTTCTC 59 127916490 127916753 ATTCTCGTTCACCTTGTCC 59 NA Mus musculus 50 Pcsk6 ENSMUSG00000030513 ENSMUST00000055576 1 1 2 115 7 73170280 73176639 GGAAGAGTACACAGGTGTG 59 73176718 73176736 TGTTTGTCTTGGAGTTCCC 59 NA Mus musculus 50 Tgfb1i1 ENSMUSG00000030782 ENSMUST00000070656,ENSMUST00000033046,ENSMUST00000092080,ENSMUST00000098011 3 4 4 97 7 135392697 135392820 TGTTCAGAACCATCTTCCAG 59 135392880 135392898 CTTTGCTAGTCTGTCCTGG 59 NA Mus musculus 50 Tial1 ENSMUSG00000030846 ENSMUST00000106226 2 1 2 89 7 135592278 135598461 ATGATAACAGAGCAACCCG 59 135592207 135592226 AAAGCAATATGGGTCATTGC 59 NA Mus musculus 50 Slc35a2 ENSMUSG00000031156 ENSMUST00000115660,ENSMUST00000115663,ENSMUST00000033496 1 3 4 118 X 7466780 7466798 TGGTCCAATATGTGGACAC 59 7466879 7469274 ATATGTCACCTGGAAAGTGG 59 NA Mus musculus 50 Slc38a5 ENSMUSG00000031170 ENSMUST00000115591,ENSMUST00000033512,ENSMUST00000115590 1 3 3 80 X 7856117 7856225 TTGGGTTTATTGGGTCCAC 59 7856268 7856287 CAGTAGGTACAATACGGAGG 58 NA Mus musculus 50 Gpm6b ENSMUSG00000031342 ENSMUST00000112236,ENSMUST00000060210,ENSMUST00000112228,ENSMUST00000112229 1 4 12 80 X 162821868 162821887 TCTACATGTCCTATCACCTG 57 162821930 162824899 TCATGAGGAAGTGGATCAG 58 NA Mus musculus 50 Atp11a ENSMUSG00000031441 ENSMUST00000091237,ENSMUST00000033818 3 2 2 85 8 12827590 12828458 AGGAATTTGTTCCTCAGGG 59 12828507 12828525 GTGACGTACATGGATACGG 59 NA Mus musculus 50 Arhgef7 ENSMUSG00000031511 ENSMUST00000110911,ENSMUST00000074856 1 2 7 88 8 11822037 11831498 ACCCTGAACTCAAGTTCAC 59 11831550 11831568 TTGCTCTTGGTTTCTTCGA 59 NA Mus musculus 50 Hpgd ENSMUSG00000031613 ENSMUST00000034026 2 1 1 60 8 58773840 58773859 TGACCAGAAACAACTGAGAG 59 58777174 58777193 ATCCAATCTTCCGAAATGGT 59 NA DesignNoJunction Mus musculus 50 Crispld2 ENSMUSG00000031825 ENSMUST00000034282,ENSMUST00000108972,ENSMUST00000098357 2 3 3 84 8 122557525 122563934 TCTATGCTGATACTTCCAGC 58 122563981 122563999 ATCACATCTGCATAGCCAC 59 NA Mus musculus 50 E330016A19Rik ENSMUSG00000032344 ENSMUST00000070742,ENSMUST00000085306,ENSMUST00000034898,ENSMUST00000113356 1 4 4 79 9 78285143 78285162 GATGCTGTCAAAGTTTAGGA 57 78283464 78283482 TTTCCTTCTCCACACTGAC 59 NA DesignNoJunction Mus musculus 50 MGI:1330303 ENSMUSG00000032534 ENSMUST00000093791,ENSMUST00000016523 1 2 2 80 9 102504875 102505188 CTGAGAAGTTACTAGAGGCTC 59 102504815 102504835 CAAGGATGAAGGTTTCTTGAG 58 NA Mus musculus 50 Cpne4 ENSMUSG00000032564 ENSMUST00000077190 2 1 3 82 9 104828162 104909875 GGCTGAAGGTAGCTATAGAC 59 104909918 104909938 CTGGTAAGGGTGGATATAGTG 59 NA Mus musculus 50 Nope ENSMUSG00000032816 ENSMUST00000035499,ENSMUST00000077696 2 2 2 83 9 64982429 64982922 ATATGACGCCATAAAGAGCA 59 64982968 64982986 GAGTGGACAATGACCTCAG 59 NA Mus musculus 50 Foxn3 ENSMUSG00000033713 ENSMUST00000046859,ENSMUST00000085108 2 2 2 115 12 100579735 100626579 AGGAGTCAGAGTATTGGGA 58 100579638 100579656 TAAGCCTGAGGAGTAGGAG 59 NA Mus musculus 50 Mtap9 ENSMUSG00000033900 ENSMUST00000091014 1 1 2 158 3 82184019 82184037 TTAAAGAGATCCGGTCCCA 59 82184157 82185824 TAACCACTCCTGATAAACAGC 59 NA Mus musculus 50 Mga ENSMUSG00000033943 ENSMUST00000110774,ENSMUST00000110773,ENSMUST00000046717 2 3 4 83 2 119757596 119757614 TCTTCTACTACGAAGGGCA 59 119757660 119758248 TTCTCGTATCACAGGATTGG 59 NA Mus musculus 50 Faah ENSMUSG00000034171 ENSMUST00000049095 1 1 2 96 4 115672201 115672661 AGATTGAGATGTATCGCCAG 59 115672124 115672142 TTCAAATCCAGAGCAGGAC 59 NA Mus musculus 50 4732418C07Rik ENSMUSG00000034210 ENSMUST00000106525,ENSMUST00000106524,ENSMUST00000074425 2 3 4 81 4 115439046 115439064 CACAGCTTCTTAGAAACCA 57 115439109 115446452 TCCTGAAGATCTTTGATGC 57 NA Mus musculus 50 Rsrc1 ENSMUSG00000034544 ENSMUST00000065074,ENSMUST00000046542,ENSMUST00000065047,ENSMUST00000065115 1 4 4 158 3 66984776 67010354 TTAGAACATCTGCCTCCAG 58 67153838 67153856 GACTTGTTCTACCAGGGTG 59 NA Mus musculus 50 Txndc13 ENSMUSG00000034723 ENSMUST00000038228,ENSMUST00000110120 3 2 3 110 2 134447163 134465469 TTCAAGAGCCAGGTTTGAG 59 134446367 134446388 AATCTTCATAGATTCCTGGACC 59 NA Mus musculus 50 Tbr1 ENSMUSG00000035033 ENSMUST00000048934,ENSMUST00000102737 3 2 2 119 2 61645385 61645403 TGGAAGTGAATGAGGATGG 58 61645483 61646565 GTTGTGTAATATCCGTGTTCTG 59 NA Mus musculus 50 Mitf ENSMUSG00000035158 ENSMUST00000043637,ENSMUST00000113342,ENSMUST00000101123,ENSMUST00000113339,ENSMUST00000043628 3 5 7 118 6 97946449 97953885 CAAATGGCAAATACGTTACC 57 97953966 97953984 TTTATGTTGGGAAGGTTGG 57 NA Mus musculus 50 Mid1 ENSMUSG00000035299 ENSMUST00000112104,ENSMUST00000112107,ENSMUST00000112108,ENSMUST00000036753,ENSMUST00000112105,ENSMUST00000078947 3 6 7 159 X 166404083 166414865 ATGTTGAAGTCAATGCATCC 58 166419841 166419860 TTACAGTTTGCAATCTGCTG 59 NA Mus musculus 50 6530402F18Rik ENSMUSG00000035513 ENSMUST00000048455,ENSMUST00000091153 2 2 6 92 2 29052660 29054343 GAATTTCAAGACTGCGAGTG 59 29052587 29052605 GTTGTGTTTACAGCTGACG 59 NA Mus musculus 50 Slc17a3 ENSMUSG00000036083 ENSMUST00000039721,ENSMUST00000110422 3 2 4 119 13 23938296 23938747 GTTCAAGGCTTAATGCAGG 59 23938830 23944230 TCCCAATGTCATTCCTGAC 59 NA Mus musculus 50 Pphln1 ENSMUSG00000036167 ENSMUST00000109256 3 1 3 131 15 93272130 93285889 GTCTCAGCATAGAAGTAAAGAG 58 93290122 93290140 AGTTCCTTCTCAGTTAGCC 58 NA Mus musculus 50 Mbd5 ENSMUSG00000036792 ENSMUST00000112754,ENSMUST00000047413 3 2 4 119 2 49130281 49134105 TTCAGAACTTCCAGGTGAG 58 49134188 49134206 CTTGGAAATGTGGAAGTGC 59 NA Mus musculus 50 2510003E04Rik ENSMUSG00000036955 ENSMUST00000065887 2 1 2 82 10 62026032 62026050 GGAAATAGCAAGATGCTGG 58 62022616 62025986 GCTCTCCTATGTTGTCCTG 59 NA Mus musculus 50 Ttc29 ENSMUSG00000037101 ENSMUST00000109902,ENSMUST00000049395 1 2 2 82 8 80806279 80839582 CACTAACAGTGCTGAATCG 58 80839628 80839646 GATAGCCTCATAGGCTCTC 58 NA Mus musculus 50 Serpine1 ENSMUSG00000037411 ENSMUST00000041388,ENSMUST00000077523 2 2 2 81 5 137545409 137546913 CAAAGTCAATGAGAAGGGC 58 137545346 137545365 GATCTCATTCTTGTTCCACG 58 NA Mus musculus 50 Adam32 ENSMUSG00000037437 ENSMUST00000110649 2 1 2 82 8 25962740 25981165 GGAACGGAAAGCAAATCAG 59 25962676 25962694 AACATGTCTCTTCACACCG 59 NA Mus musculus 50 Fgd3 ENSMUSG00000037946 ENSMUST00000110087,ENSMUST00000048716 3 2 3 82 13 49363653 49363671 GTGTAAGAGCTGTGGTGAG 59 49362088 49363607 TCCTACAGATGACCTCTCC 59 NA Mus musculus 50 Pde4dip ENSMUSG00000038170 ENSMUST00000090750,ENSMUST00000107038,ENSMUST00000045243 3 3 3 80 3 97561508 97561526 CAGGAGTCATCTCAGAAGC 59 97561211 97561464 CTCCTCAGTCTCACTTTCC 58 NA Mus musculus 50 Mical2 ENSMUSG00000038244 ENSMUST00000050149,ENSMUST00000106648 1 2 3 97 7 119475541 119490241 AGTCGTGAAACAGGAATCC 59 119490300 119490320 GCTCTATCATGTATACACGCT 59 NA Nonspecific Mus musculus 50 Mical2 ENSMUSG00000038244 ENSMUST00000106649 1 1 3 86 7 119480481 119488770 CCAGAAAGCTGACAGTAGG 59 119488817 119488838 GTCTGTGATCATTCAAGTACAG 58 NA Nonspecific Mus musculus 50 Pcp4l1 ENSMUSG00000038370 ENSMUST00000111332,ENSMUST00000045704 3 2 2 271 1 173126286 173126304 CAGCATTAAGCAACAGCTC 59 173104603 173104624 GGTCAATGTCAATTTCTTCCTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Susd4 ENSMUSG00000038576 ENSMUST00000085724 1 1 2 94 1 184788657 184788675 TTTAAACTCGAGGGTTCCG 59 184788733 184817480 AGTGGACAAACTTCCAGAG 59 NA Mus musculus 50 AA673488 ENSMUSG00000038611 ENSMUST00000046688,ENSMUST00000106027 1 2 2 80 7 148447377 148447396 CCAACAACTCAGAAGAAAGG 58 148447439 148447690 GCAGCTTCTTCATGTACTC 58 NA Mus musculus 50 Runx2 ENSMUSG00000039153 ENSMUST00000077846 1 1 5 116 17 44776703 44776721 CCTATCTGAGCCAGATGAC 58 44741246 44776624 CACAGAAACCTGAAATACGC 59 NA Mus musculus 50 Smarcal1 ENSMUSG00000039354 ENSMUST00000047615 1 1 2 80 1 72674762 72675953 GATGACTACCTTTGGCCTC 59 72675996 72676015 TTCCGAGAAATTGGTCTCAG 59 NA Mus musculus 50 Picalm ENSMUSG00000039361 ENSMUST00000049537,ENSMUST00000107223 1 2 3 87 7 97340256 97342793 CAACAATGAATGGCATGCA 59 97344202 97344220 CCATATCCTATCATGCCCG 59 NA Mus musculus 50 BC021608 ENSMUSG00000039438 ENSMUST00000044694 3 1 1 66 9 44610878 44610896 ACTCCAAATGATCAGGCAG 59 44610830 44610848 CAACAACATCTCCAAAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Dcxr ENSMUSG00000039450 ENSMUST00000026144 1 1 2 95 11 120587312 120587412 TACTGTCTACTGTTCCACCA 59 120587150 120587168 TTTACTGCATTCACACGGA 59 NA Mus musculus 50 Pik3cd ENSMUSG00000039936 ENSMUST00000038859,ENSMUST00000105688,ENSMUST00000105689 3 3 4 133 4 149029543 149029561 GAACATGAGAAGGACCTGG 59 149029341 149029447 CACAGCAAATAGAGCATCTG 58 NA Mus musculus 50 9030409G11Rik ENSMUSG00000040606 ENSMUST00000070792 2 1 2 86 4 141665249 141665268 GTGAAACACAGAACACAGAC 59 141664618 141665200 CTGCATACTCCTTCAGGTC 59 NA Mus musculus 50 D14Abb1e ENSMUSG00000040651 ENSMUST00000059031 3 1 2 80 14 28289813 28289833 CGAGTTATTTGTATCTGGTGG 58 28289874 28290307 TTAAGGCTCTCAATTGTGAC 57 NA Mus musculus 50 Ulk4 ENSMUSG00000040936 ENSMUST00000098284,ENSMUST00000051479,ENSMUST00000098283 2 3 4 93 9 121175727 121182004 AAATAACCAACTGGGTCCG 59 121175652 121175670 AACCAGAGATGATTGCTGG 59 NA Mus musculus 50 Rps19 ENSMUSG00000040952 ENSMUST00000048156,ENSMUST00000108430,ENSMUST00000108429 2 3 3 69 7 25673356 25673374 CAAGATCTATGGAGGACGG 58 25673407 25673425 CACACTCTTAGAGCCTCTG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Ccdc64 ENSMUSG00000041609 ENSMUST00000058338 1 1 3 95 5 116120230 116120248 AGAATGACCTGCTTCAAGG 59 116117611 116120171 CCTGTGATTCCTGTAGGTC 59 NA Mus musculus 50 Rhod ENSMUSG00000041845 ENSMUST00000048197 1 1 1 60 19 4432070 4432089 CCAATCCAAACAGCTTTGAC 59 4426736 4426754 CAGAAATGTGTCACCTCTG 58 NA DesignNoJunction Mus musculus 50 Zfp410 ENSMUSG00000042472 ENSMUST00000045931 3 1 2 85 12 85673961 85678570 GGTAGTTCACTCAGGTGAG 59 85678617 85678637 TCATATGCACATTCCTACTCC 59 NA Mus musculus 50 Eif2c4 ENSMUSG00000042500 ENSMUST00000084289 1 1 3 200 4 126187366 126188649 GCTAAAGAGTTTCACTGACC 58 126185742 126187203 TTCACCTCCGCATATACTG 58 NA Mus musculus 50 Mdga1 ENSMUSG00000043557 ENSMUST00000073556 3 1 2 176 17 29975528 29976761 ACTACACAGAGCACAACAC 59 29975060 29975389 ACATGTAATAGCCTTCAGGG 59 NA Mus musculus 50 2310022M17Rik ENSMUSG00000044502 ENSMUST00000109417,ENSMUST00000058060,ENSMUST00000109415 2 3 3 101 11 31569315 31569334 ATTTCGTGTCAACACATCTG 58 31566923 31569251 ACATACCTGACTGAACCAC 58 NA Mus musculus 50 Lrfn4 ENSMUSG00000045045 ENSMUST00000113822,ENSMUST00000053597 3 2 2 64 19 4614109 4614127 TCTCAGTGGCAATCAACTG 59 4614063 4614081 CGAGACTGTCAAGGAAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp629 ENSMUSG00000045639 ENSMUST00000058038 1 1 2 127 7 134756280 134757477 ACTTGTCCTAGAGACCCTG 59 134756067 134756189 CTTCCAGCACCTCTATGAG 59 NA InUTR Mus musculus 50 Mcart1 ENSMUSG00000045973 ENSMUST00000107796,ENSMUST00000116341 2 2 3 86 4 45417649 45417668 CTAACAATGGACAACACTGG 58 45413035 45417603 GGAAGAGTTTCTTTAACCTGTG 59 NA Nonspecific, InUTR Mus musculus 50 Serinc4 ENSMUSG00000046110 ENSMUST00000110613,ENSMUST00000056312,ENSMUST00000067823 3 3 3 82 2 121277902 121278100 ACTGGTTCAGCTATGAGGA 59 121277838 121277856 TGAGGCAACTTTAACCCAG 59 NA Mus musculus 50 She ENSMUSG00000046280 ENSMUST00000050401,ENSMUST00000107401 2 2 2 95 3 89653512 89653530 TACCAGAGGAGGATGATCG 59 89653589 89655542 CCTCAAACTGGACTGACAG 59 NA Mus musculus 50 Lyrm4 ENSMUSG00000046573 ENSMUST00000053265 3 1 1 62 13 36184679 36184697 ACCTTGAAATAATCCGCAG 57 36071737 36071756 TGATAAGCTTGTCAGTTGAG 57 NA DesignNoJunction Mus musculus 50 Tmem164 ENSMUSG00000047045 ENSMUST00000087333,ENSMUST00000112892,ENSMUST00000054263,ENSMUST00000112896 3 4 9 81 X 139117485 139186594 TGATGCATATCTTCCTCCTG 58 139205514 139205533 CCATTCAACATGTGCATCTG 59 NA Mus musculus 50 Defb9 ENSMUSG00000047390 ENSMUST00000057076 1 1 1 60 8 22992387 22992406 CTGCCAACTCTATAATCGGT 59 22992346 22992365 CAGTACCCTCCTTTCTTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pygo2 ENSMUSG00000047824 ENSMUST00000060061,ENSMUST00000107414,ENSMUST00000107413 2 3 3 108 3 89236693 89236711 AACATGAACTTTCCCAGTC 57 89236783 89236801 AGATCATGGGACCAAATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tshz2 ENSMUSG00000047907 ENSMUST00000087966 1 1 4 82 2 169709423 169709443 CAAGTTATCCAACAGTGAGAG 58 169709694 169709712 CTTGATAGTGGCCTGTCTC 59 NA DesignNoJunction Mus musculus 50 D930020E02Rik ENSMUSG00000047977 ENSMUST00000059362 1 1 1 224 14 69911184 69911202 AACTCATCCTGAGTCTTCC 58 69910827 69910845 AAAGGACGAAACAGAGGAC 59 NA DesignNoJunction, InUTR Mus musculus 50 NM_027304.1 ENSMUSG00000048077 ENSMUST00000060855 3 1 1 64 15 98086706 98086724 ATTACAACAGAGTACGGCC 59 98086660 98086678 TGAACTCTTCTCCTCTGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mmp12 ENSMUSG00000049723 ENSMUST00000005950 3 1 2 85 9 7353500 7353518 TCTGTCACCAAAGCTTGAG 59 7353567 7354737 CTTCCACCAGAAGAACCAG 59 NA Mus musculus 50 Arhgap23 ENSMUSG00000049807 ENSMUST00000107602 1 1 3 96 11 97309823 97309970 TCTGATCCAGAACAGTGAC 58 97312714 97312732 CTTTAGGTAGGCATCCTGG 59 NA Nonspecific Mus musculus 50 Apol10b ENSMUSG00000050014 ENSMUST00000089465,ENSMUST00000109777 3 2 2 95 15 77422574 77426437 GGAAGATTCCTTGACCTGG 59 77419237 77422515 GAGCTACTCCTTGCTTGAG 59 NA InUTR Mus musculus 50 Tmem198 ENSMUSG00000051703 ENSMUST00000113575,ENSMUST00000050899 1 2 2 164 1 75479711 75480959 ACACAGAAGTCGTCATCAG 59 75481087 75481105 GTCTATAAGCAGGGTCAGG 58 NA Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000099981,ENSMUST00000011934,ENSMUST00000111882,ENSMUST00000111865,ENSMUST00000099980 3 5 14 80 2 76784803 76784821 ACAGACTGCCAGATTTGAC 59 76784601 76784760 ACAATTTGCTGTCCATTGTG 59 NA Mus musculus 50 5430435G22Rik ENSMUSG00000052688 ENSMUST00000064679,ENSMUST00000064664 2 2 2 124 1 133594519 133594997 CTTTGAAGCTGCAGATCTG 58 133595084 133595103 TTCAAAGGACTCTGGATCAG 59 NA Mus musculus 50 Krt42 ENSMUSG00000053654 ENSMUST00000017270 2 1 2 124 11 100130734 100130752 TCAAGACCATAGAGGACCT 58 100128393 100128519 CTCTGTCTCGTACTTGGTG 59 NA Mus musculus 50 Eef1d ENSMUSG00000055762 ENSMUST00000109972,ENSMUST00000089681,ENSMUST00000089680,ENSMUST00000073802,ENSMUST00000023235,ENSMUST00000109976,ENSMUST00000116440,ENSMUST00000109975 2 8 9 131 15 75726770 75726788 AAGAAGATAAGGAGGCTGC 59 75726341 75726675 CAGTCTCATCATCCCAAGG 59 NA Mus musculus 50 Clca1 ENSMUSG00000056025 ENSMUST00000029932 1 1 2 108 3 144410551 144412639 GGACATGACAGTTGGAGAG 59 144410461 144410481 GTGATAACAAAGAACGTGTCG 59 NA Mus musculus 50 Trim34 ENSMUSG00000056144 ENSMUST00000060315,ENSMUST00000106848,ENSMUST00000106849,ENSMUST00000106847,ENSMUST00000072555 1 5 8 80 7 111409010 111409414 CCTACTGGGACAACTTCAC 59 111409458 111409476 ATGTCACTTGTCTGTGGTC 59 NA Mus musculus 50 Pde1a ENSMUSG00000059173 ENSMUST00000102651,ENSMUST00000102652 3 2 7 199 2 79746315 79748506 TTTAGAAGACTGCTGGACAC 59 79742024 79746154 TTCCTGTACATCCTTTCCAC 59 NA Mus musculus 50 Bcas3 ENSMUSG00000059439 ENSMUST00000108062,ENSMUST00000108061,ENSMUST00000092821 2 3 12 151 11 85615442 85627507 GGATCTGGAACAGACACAG 59 85635578 85635596 CACGCTTTGTTACTGTTGG 59 NA Mus musculus 50 Eno3 ENSMUSG00000060600 ENSMUST00000108548,ENSMUST00000072841 2 2 2 80 11 70475762 70475871 ACCAGCTTATGAGGATTGAG 59 70475914 70475932 ATTTGGCCTTTGGATTACG 58 NA Mus musculus 50 Slc4a4 ENSMUSG00000060961 ENSMUST00000113218,ENSMUST00000066831,ENSMUST00000005812 1 3 5 84 5 89658003 89661797 CAATGACGATTCTGACTGC 58 89661845 89661863 TAGGAAAGGTTGCTGTTCC 59 NA Mus musculus 50 Kif1b ENSMUSG00000063077 ENSMUST00000060537,ENSMUST00000055647,ENSMUST00000105694,ENSMUST00000030806 2 4 4 80 4 148632029 148632047 TCTGTGACCAGTATTCAGG 58 148627849 148631986 CTTCTCTGACTCCTTCAGAC 59 NA Mus musculus 50 OTTMUSG00000008833 ENSMUSG00000066060 ENSMUST00000084312 1 1 1 71 4 118741688 118741706 GAACAGTGACAGAGGACAG 59 118741635 118741653 GAAGACTTTCTCCGGAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Prl2b1 ENSMUSG00000069258 ENSMUST00000091678,ENSMUST00000102954 1 2 2 80 13 27477152 27478260 CTAGTAAGAACTCCAGAAACAC 58 27477093 27477111 CACAAGATGATTCAGAGCG 58 NA Mus musculus 50 Wfdc8 ENSMUSG00000070533 ENSMUST00000109339,ENSMUST00000094351,ENSMUST00000094350,ENSMUST00000109338 3 4 4 84 2 164425576 164428660 GTTTGTTGAGAAGAAAGGACAG 59 164425513 164425532 ATCCATGTCGTTCTTACAGG 59 NA Mus musculus 50 Alg6 ENSMUSG00000073792 ENSMUST00000107007,ENSMUST00000107006,ENSMUST00000097961 3 3 3 99 4 99417482 99419518 GGTATCATTACCAGTTTGCT 57 99419686 99419705 CTTTAATAGAAGAGGCAGCA 57 NA Mus musculus 50 NP_796335.1 ENSMUSG00000073811 ENSMUST00000097990 3 1 2 127 4 88248749 88248767 GGATCACTGTGTACCTGAG 59 88248190 88248658 TGCTTGTTCCTTCTCACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ttpa ENSMUSG00000073988 ENSMUST00000098245,ENSMUST00000098244 3 2 2 81 4 19951031 19955563 ATTAAGGACCGGATTCATCTG 59 19955606 19955624 ATTCCCGAGGAAGAATGTC 59 NA Mus musculus 50 Defcr16 ENSMUSG00000074444 ENSMUST00000098898 3 1 1 160 8 22274345 22274364 AAGACACTAATCCTCCTCTC 57 22274487 22274505 TGAAGAGAAGAGCCTTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Grk6 ENSMUSG00000074886 ENSMUST00000001115,ENSMUST00000099482 2 2 2 80 13 55553192 55553501 CAGTAGGTTTGTAGTGAGC 57 55553544 55553563 CCTCCATTCATCAATGTCAG 58 NA Mus musculus 50 0610010B08Rik ENSMUSG00000078886 ENSMUST00000109009,ENSMUST00000109008,ENSMUST00000099024,ENSMUST00000109007 2 4 4 63 2 175975175 175975193 GAGTCTCTACAAGGGTGTG 59 175975217 175975443 CCAAATGTAACCTATAGCTGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Etohi1 ENSMUSG00000078889 ENSMUST00000109027,ENSMUST00000109018 2 2 9 60 2 175691587 175691605 AGAGAAAGTCTACGAAGGC 58 175691545 175691563 ATGGAGATCAATGCTTGCT 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Icosl ENSMUSG00000000732 ENSMUST00000095482,ENSMUST00000105393 2 2 2 114 10 77536643 77536663 GTAATCAGCACATTAAGGCTC 59 77536739 77537961 CAGTGAAACTTTCTGCCTG 58 NA Mus musculus 50 Serpinf1 ENSMUSG00000000753 ENSMUST00000000769,ENSMUST00000094022 1 2 2 90 11 75224399 75224417 AAGACTATCCAAGCTGTGC 59 75223887 75224345 ACTGTAGCTTCATGTCCTG 58 NA Mus musculus 50 Vpreb3 ENSMUSG00000000903 ENSMUST00000000926 1 1 1 167 10 75411153 75411904 AGTCTTTCAGCCAACTCTG 59 75412032 75412053 GCGTAATAGTAGAGAAGATGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mybpc3 ENSMUSG00000002100 ENSMUST00000028718,ENSMUST00000111430 2 2 2 80 2 90975342 90975360 CATAACATGGTGGGTTCCA 59 90975404 90975517 CTCATATGTGATGCCTGGT 59 NA Mus musculus 50 Dll3 ENSMUSG00000003436 ENSMUST00000050191,ENSMUST00000108315,ENSMUST00000094650 1 3 3 153 7 29081519 29083545 GCTGTAGTGAAACCTCTGG 59 29081384 29081402 CAGACATAGGCAGAGTCAG 59 NA InUTR Mus musculus 50 Pex5 ENSMUSG00000005069 ENSMUST00000112532,ENSMUST00000080557,ENSMUST00000112531,ENSMUST00000035861 2 4 4 62 6 124355281 124363295 AAGTTACAGACCCACTGTC 58 124355237 124355255 CAGACTGCTCCAGATACTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Zbtb32 ENSMUSG00000006310 ENSMUST00000108151,ENSMUST00000006473,ENSMUST00000108150 3 3 3 240 7 31375382 31375400 GGAGACACATTACCGAGTC 59 31375012 31375030 AGAGTAGAGGAAGGTGGAG 59 NA DesignNoJunction Mus musculus 50 Cryba2 ENSMUSG00000006546 ENSMUST00000006721 2 1 1 119 1 74937160 74937178 GATGACTACCCATCACTGC 59 74936665 74936683 GACATACTGGTAACCTCGG 59 NA DesignNoJunction Mus musculus 50 D130043K22Rik ENSMUSG00000006711 ENSMUST00000006893 2 1 1 80 13 24954540 24954559 TAGTACTAACCTTACCGGAC 57 24954601 24955477 AGGAGTAAGTTGTATCTGCA 58 NA Mus musculus 50 Spib ENSMUSG00000008193 ENSMUST00000107921 2 1 3 143 7 51785285 51787404 CACATACCCAGAAGGAGTC 59 51784912 51784930 GGATCGAAGGCTTCATAGG 59 NA DesignNoJunction Mus musculus 50 Rab25 ENSMUSG00000008601 ENSMUST00000008745 1 1 1 173 3 88347306 88347324 GATTGTTGTCATGCTCGTG 59 88346283 88346632 GCAAAGATCTCTTTGAGGAC 58 NA Mus musculus 50 Ccl8 ENSMUSG00000009185 ENSMUST00000009329 1 1 1 181 11 81928812 81929556 CAGATAAGGCTCCAGTCAC 59 81930079 81930097 CATGTACTCACTGACCCAC 59 NA DesignNoJunction Mus musculus 50 Brf1 ENSMUSG00000011158 ENSMUST00000011302 3 1 1 98 12 114200603 114200621 AATAGTGCTGATCCTGGGA 59 114199481 114199940 TAAGAGTAAGGCCTCTCCC 59 NA Mus musculus 50 Trpv4 ENSMUSG00000014158 ENSMUST00000112225,ENSMUST00000071968,ENSMUST00000112222 2 3 3 101 5 115080908 115083158 AACAGCAAGATCGAGAACC 59 115080825 115080843 GATGTAGAAGGACACAGCC 59 NA Mus musculus 50 Chfr ENSMUSG00000014668 ENSMUST00000112519,ENSMUST00000014812,ENSMUST00000100932 3 3 3 80 5 110572616 110572634 ACTTACCCTTTACAGAGCG 58 110572676 110573626 ATAGAGGTATGCCACATTGTG 59 NA Mus musculus 50 Mtap2 ENSMUSG00000015222 ENSMUST00000114017,ENSMUST00000114015,ENSMUST00000024639,ENSMUST00000114018,ENSMUST00000114013,ENSMUST00000077355,ENSMUST00000114012 3 7 7 85 1 66468293 66468311 GTGTATCAGGAGACAGGGA 59 66468360 66471784 AATTGGTTCTGACCTGGTG 59 NA Mus musculus 50 Ager ENSMUSG00000015452 ENSMUST00000015596 2 1 1 81 17 34735724 34735845 CAGTGTCCCTAATAAGGTGG 59 34735889 34735907 TTTCCCATCTAAGTGCCAG 59 NA Mus musculus 50 Serac1 ENSMUSG00000015659 ENSMUST00000115780,ENSMUST00000097432,ENSMUST00000024570 2 3 3 84 17 6060356 6061556 CATTCGGAGATACCCTCAC 59 6060290 6060308 CCTTGTGAAGCTGGTAGAG 59 NA Mus musculus 50 Rxrg ENSMUSG00000015843 ENSMUST00000015987,ENSMUST00000111386,ENSMUST00000111384,ENSMUST00000111380 2 4 4 81 1 169564592 169564610 TGAAAGACATGCAGATGGA 58 169564655 169565846 GATAAACCCTTGGCATCTG 58 NA Mus musculus 50 Il17rb ENSMUSG00000015966 ENSMUST00000016110,ENSMUST00000112261 3 2 2 168 14 30819217 30819236 AACATAAGCTGGATACTCCG 59 30816861 30817467 AGGAGAATGTCCATTTGCC 59 NA Mus musculus 50 Chdh ENSMUSG00000015970 ENSMUST00000067620,ENSMUST00000022556 3 2 2 135 14 30849091 30849668 GTCAACAGAAACCGATGTC 58 30849765 30849785 TATCTCTTTGTCTGACTGGAC 58 NA Mus musculus 50 Celsr1 ENSMUSG00000016028 ENSMUST00000016172 1 1 1 80 15 85768435 85769545 GAACTGTGAACAAGCTATGC 59 85768374 85768392 ATGGTGATGTCAAGGTCAC 59 NA Mus musculus 50 Lonrf3 ENSMUSG00000016239 ENSMUST00000115255 3 1 2 85 X 33879597 33879617 ACCCTAGATTAAAGGAACACG 59 33879664 33881629 CTCCAGATTCTCCTGTGAC 59 NA Mus musculus 50 Etv4 ENSMUSG00000017724 ENSMUST00000017868,ENSMUST00000107176 1 2 2 85 11 101645317 101645551 CTCAGAAGATCTCTTCCAGG 58 101638431 101638449 CAAACTGCTCATCACTGTC 58 NA Mus musculus 50 Gdf9 ENSMUSG00000018238 ENSMUST00000018382 2 1 1 60 11 53250476 53250496 CCTCATCTTGTATCTCAACGA 59 53250518 53250536 CTGAAGAGACTGCCAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dalrd3 ENSMUSG00000019039 ENSMUST00000019183 3 1 1 101 9 108473840 108473951 CAGTACTACAGGCTCAGAC 58 108474123 108474141 GATGTCGAAGGTCTCAGTC 59 NA Mus musculus 50 Gipc1 ENSMUSG00000019433 ENSMUST00000019577 2 1 1 85 8 86185963 86185981 AGGTGGAAGTGTTCAAGTC 59 86186029 86186142 CTTGATGCGCTTAATGAAGG 59 NA Mus musculus 50 Arid3a ENSMUSG00000019564 ENSMUST00000019708,ENSMUST00000105376 2 2 2 61 10 79412349 79413383 TCAAGAAAGAGGAAGACTCG 59 79413407 79413425 CAAAGATACAGGTAGGCGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Tnfaip3 ENSMUSG00000019850 ENSMUST00000105527,ENSMUST00000019997 2 2 2 81 10 18723428 18723447 CAGAAGTGTTTCATCGAAGC 59 18722806 18723384 TATGCTGGCTTGATCTCAG 59 NA Mus musculus 50 Kitl ENSMUSG00000019966 ENSMUST00000105283,ENSMUST00000020129,ENSMUST00000099320 1 3 3 150 10 99550796 99550814 TCAAGTCTTACAAGGGCAG 59 99551903 99558667 ATGAACTGTTACCAGCCAC 59 NA Nonspecific, InUTR Mus musculus 50 Mdm1 ENSMUSG00000020212 ENSMUST00000020437 3 1 1 88 10 117587933 117587951 TAACTCCAGTGAAGGAACC 58 117588002 117589066 CTCATCTGCCTTCTTTACTG 57 NA Mus musculus 50 Sumo3 ENSMUSG00000020265 ENSMUST00000020501,ENSMUST00000099538 1 2 2 90 10 77076734 77076752 ATGAGGCAGATTCGATTCC 59 77078902 77078920 CAATGGTGTCCTCATCCTC 59 NA DesignNoJunction Mus musculus 50 Cyfip2 ENSMUSG00000020340 ENSMUST00000093166,ENSMUST00000093165 1 2 2 80 11 46084168 46086126 AAGAGAACAAGTCCAAGTGG 59 46084107 46084125 GGATCTGAACCATCTGCTC 59 NA Mus musculus 50 Hnrpab ENSMUSG00000020358 ENSMUST00000109103,ENSMUST00000074669,ENSMUST00000101249 3 3 3 129 11 51418003 51418021 GAGCTTCCAATAGATCCCA 58 51416188 51417910 TGATTTCACACTTGCTTCC 58 NA Mus musculus 50 Hs1bp3 ENSMUSG00000020605 ENSMUST00000020927 1 1 1 87 12 8324678 8324696 GTACCAGATCCTAGTGGTG 58 8324745 8328333 TTTAGAGACCAAGAACTGGAC 59 NA Mus musculus 50 Cdc27 ENSMUSG00000020687 ENSMUST00000106962,ENSMUST00000093923 3 2 3 80 11 104371606 104374226 CACATTGGAGTAGTTCAGCA 59 104371545 104371563 GGGATCGATAACAATGGCT 59 NA Mus musculus 50 Acox1 ENSMUSG00000020777 ENSMUST00000072948,ENSMUST00000066587,ENSMUST00000021129 2 3 3 110 11 116040155 116040936 TGAAATCAAGAGAAGCGAG 57 116040063 116040081 TATCTTCCGAGAAAGTGGA 57 NA Mus musculus 50 Ube2o ENSMUSG00000020802 ENSMUST00000082152 3 1 1 81 11 116401439 116402409 GACAGAATGGACCTCTTCTC 59 116401377 116401397 GGATGTCAAATAGGTAGAGGC 59 NA Mus musculus 50 Aanat ENSMUSG00000020804 ENSMUST00000021159 3 1 2 75 11 116457363 116457393 CACTTCTGTGCACAAACAG 59 116457432 116457450 AGAGATAAAGGCTGTAGCA 57 NA DesignNoJunction Mus musculus 50 Prkch ENSMUSG00000021108 ENSMUST00000021527 2 1 1 80 12 74876511 74877908 ACCTAGAATCAAATCCCGAG 58 74877951 74877969 TCAATCGGAGTTAAGACGG 59 NA Mus musculus 50 Traf3 ENSMUSG00000021277 ENSMUST00000021706,ENSMUST00000060274 3 2 2 91 12 112490955 112493439 CCTGGAGAAGAAGGTTTCC 59 112493494 112493512 TCTCAAAGCTGCAGATCTG 59 NA Mus musculus 50 1700026J04Rik ENSMUSG00000021414 ENSMUST00000021851 2 1 1 83 13 35005544 35006318 ACTAACAAGAGCCATCTGG 58 35005479 35005497 CTGTGATCTACTGTGAGCA 58 NA Mus musculus 50 BC067074 ENSMUSG00000021763 ENSMUST00000078163 1 1 1 98 13 114141961 114156296 TTACCCAATGTCTGGTGAG 58 114156358 114156376 ATGCTGTGAATGTGAAGGA 59 NA Mus musculus 50 Diap3 ENSMUSG00000022021 ENSMUST00000022599 1 1 1 80 14 87305795 87305813 GTTGAAGTCATTGTCCCAG 58 87266439 87305751 ACATTGCTCATCACAACAG 58 NA Mus musculus 50 Scara5 ENSMUSG00000022032 ENSMUST00000022610,ENSMUST00000069226 3 2 2 122 14 66289403 66289421 GACAACAAAGCCATGTACC 59 66289507 66308618 TTTGTGACATGGACCATCC 59 NA Mus musculus 50 Trim35 ENSMUSG00000022043 ENSMUST00000022623,ENSMUST00000111119 1 2 2 89 14 66923063 66925873 CTTCCTCATGAAACACAAGAG 58 66926687 66926705 CATGCATCCATTAGCAAGC 59 NA Mus musculus 50 Zfr ENSMUSG00000022201 ENSMUST00000022814 3 1 1 80 15 12066426 12067671 ACTACCAGGACTCATATTCG 58 12067714 12067732 TTGGCTGTTGGTAGTACTG 59 NA Mus musculus 50 Pabpc1 ENSMUSG00000022283 ENSMUST00000001809 2 1 1 81 15 36532729 36535204 CGTAAAGTGTTTGTTGGACG 59 36532667 36532685 CATTGGTGAACTCCTTTGC 59 NA Mus musculus 50 Zfpm2 ENSMUSG00000022306 ENSMUST00000053467,ENSMUST00000110303 3 2 2 101 15 40584591 40605600 TGTAACAAAGGTGATGACGA 59 40605664 40605682 CCAGTCATCTGTCTCTACC 58 NA Mus musculus 50 Myc ENSMUSG00000022346 ENSMUST00000022971 1 1 1 150 15 61819694 61819712 CAAATCCTGTACCTCGTCC 59 61819826 61820911 TTGCTCTTCTTCAGAGTCG 59 NA Mus musculus 50 Col14a1 ENSMUSG00000022371 ENSMUST00000110217 2 1 3 265 15 55333114 55347728 GAGAACGAGGTCTAACTGG 59 55350694 55350714 GTAATCATTGTACGGGATGAG 58 NA DesignRelaxed Mus musculus 50 Adcy8 ENSMUSG00000022376 ENSMUST00000023007 1 1 1 80 15 64576451 64576469 GATACCCTTGAAGAACCTG 57 64569111 64576408 GTGAAGACAAAGTACTCTGG 57 NA Mus musculus 50 Trmu ENSMUSG00000022386 ENSMUST00000023019 1 1 1 84 15 85727277 85727295 TGACTCTCAATCAGGATGG 58 85727343 85727468 TAGAACACTGCAAACTGTC 57 NA Mus musculus 50 Anks3 ENSMUSG00000022515 ENSMUST00000023157 2 1 1 81 16 4956001 4956021 ATGGATACACTCCTTTGATGG 59 4954037 4955959 ACTTTGACTCCGTGATTCAG 59 NA Mus musculus 50 Gpt1 ENSMUSG00000022546 ENSMUST00000023203 1 1 1 81 15 76529767 76529857 CTATCATTTCCGGATGACCA 59 76529901 76529919 TTTAGCATGGAAGTGCCTC 59 NA Mus musculus 50 Prkdc ENSMUSG00000022672 ENSMUST00000023352 1 1 1 80 16 15699045 15699063 TGCACTTCATCCTAATGCT 58 15699107 15700744 CCTTCTTCCCTGAATTCCT 58 NA Mus musculus 50 Ropn1 ENSMUSG00000022832 ENSMUST00000023530 1 1 1 82 16 34666830 34666848 TTGCTGAAGCAGTTTACCA 59 34666894 34669997 ATGGCTCCGAAATATTCGG 59 NA Mus musculus 50 1810007M14Rik ENSMUSG00000022974 ENSMUST00000023698 1 1 1 82 16 91019547 91022306 CGTCTGTTAAGCTATTGGG 57 91019483 91019503 GCCATCTATTGATAACTCCTG 57 NA Mus musculus 50 Dhh ENSMUSG00000023000 ENSMUST00000023737 3 1 1 104 15 98725320 98725338 TAAGTATGGTTTGTTGGCG 58 98724982 98725253 AGTGAGTTATCAGCTTTGAC 57 NA Mus musculus 50 Tff3 ENSMUSG00000024029 ENSMUST00000024827 1 1 1 129 17 31264412 31264430 AATGTCAGAGTGGACTGTG 59 31262433 31264319 ATGTGCATTCTGTCTCCTG 59 NA Mus musculus 50 Cuta ENSMUSG00000024194 ENSMUST00000114935,ENSMUST00000025027,ENSMUST00000114931 3 3 3 110 17 27075112 27075371 GTTTGTTCGATCTGTGCAC 59 27075020 27075038 GAAACCGATTCTGTGACCT 59 NA Mus musculus 50 Rnf138 ENSMUSG00000024317 ENSMUST00000052396,ENSMUST00000072847 1 2 2 80 18 21176367 21179398 AGGATACAAGTTCTTCTGGG 58 21179440 21179459 CCAATAAACGTTGTCTGGTG 59 NA Mus musculus 50 Slc39a7 ENSMUSG00000024327 ENSMUST00000025186 2 1 1 107 17 34167114 34167132 GAAATTTGTGAGACACGTG 57 34166919 34167046 GAAGAACACTCATGTCTATCTC 58 NA Mus musculus 50 Srfbp1 ENSMUSG00000024528 ENSMUST00000025406 1 1 1 120 18 52635301 52635319 AAACTTGTCAGGAGTGTCG 59 52636017 52643296 GTTTCAATTCCTTCATGGCA 59 NA Mus musculus 50 Nedd4l ENSMUSG00000024589 ENSMUST00000025485,ENSMUST00000080418,ENSMUST00000091871 2 3 3 81 18 65351148 65352740 AAGAAGCCTGCTGATATTCC 59 65352784 65352802 TGATCCTCCGATAGGACTC 59 NA Mus musculus 50 Ms4a4c ENSMUSG00000024675 ENSMUST00000072729,ENSMUST00000099672 1 2 2 94 19 11490926 11492141 GGGACCAATAATGTTCATTGTC 59 11493488 11493507 TGTTCAGAGTTAGACTGCTG 59 NA Nonspecific Mus musculus 50 Lipn ENSMUSG00000024770 ENSMUST00000025682 2 1 1 91 19 34148105 34151404 GCACTACAATAGGATTTGTAGC 59 34151456 34151474 GAATGAGATCACAGGACCC 59 NA Mus musculus 50 1110014N23Rik ENSMUSG00000024797 ENSMUST00000025711 1 1 1 90 19 6069143 6069478 CTATTGATGTCCAGGTGGG 59 6069071 6069090 CTGTACACAGAGAAAGTCCT 58 NA Mus musculus 50 Prdx5 ENSMUSG00000024953 ENSMUST00000099807,ENSMUST00000025904 1 2 2 92 19 6982155 6982481 CTGTTCTAAGACCCACCTG 59 6982081 6982099 TCATTAACGCTCAGACAGG 59 NA Mus musculus 50 Slk ENSMUSG00000025060 ENSMUST00000051691,ENSMUST00000026043 2 2 2 80 19 47689748 47689903 ACACCATATTGGATGGCTC 59 47689945 47689965 CCAAACATCAGCTTTGTAGTC 59 NA Mus musculus 50 Maged2 ENSMUSG00000025268 ENSMUST00000112700,ENSMUST00000112699,ENSMUST00000026302,ENSMUST00000112697,ENSMUST00000112702 3 5 5 80 X 147245266 147245286 CAAATGACTTGGTGAAGTACC 59 147244949 147245226 TGATGTCCTTCAGCATATCTG 59 NA Mus musculus 50 Gdf11 ENSMUSG00000025352 ENSMUST00000026408 3 1 1 159 10 128323312 128323330 CTTCAAGCAAGTGCTACAC 59 128322510 128322528 GTTCTCTAGGACTCGAAGC 59 NA DesignNoJunction Mus musculus 50 2310003H01Rik ENSMUSG00000025384 ENSMUST00000026448 3 1 1 81 11 120232083 120233431 GAATACAGACAATGGTCACAG 58 120232022 120232041 TGGATCTGCTGTAGATACTG 58 NA Mus musculus 50 4933402D24Rik ENSMUSG00000025961 ENSMUST00000027102 2 1 1 96 1 63815023 63815044 CAGAAAGGAAGTTAGAATCTGC 59 63802983 63814969 ATCATGTTATCCTTCTGAGAGC 59 NA Mus musculus 50 Ctla4 ENSMUSG00000026011 ENSMUST00000097720 2 1 2 71 1 60969545 60969563 AAGGTGGAACTCATGTACC 58 60969597 60971458 AGCAATGACATAAATCTGCG 58 NA DesignNoJunction Mus musculus 50 Ngef ENSMUSG00000026259 ENSMUST00000068681,ENSMUST00000027477 1 2 2 83 1 89379284 89381188 AAGGAGCTAGAAATGGTGG 58 89379219 89379239 CTTCTGAATGCTGATCATCTG 58 NA Mus musculus 50 Tnnt2 ENSMUSG00000026414 ENSMUST00000112087,ENSMUST00000112086,ENSMUST00000112085,ENSMUST00000027671 1 4 4 85 1 137744341 137744568 GACTTTGATGACATCCACAG 58 137744616 137744634 TTCCTGTTCTCGAAGTGAG 58 NA Mus musculus 50 Rgl1 ENSMUSG00000026482 ENSMUST00000111859,ENSMUST00000027760,ENSMUST00000111857 2 3 3 80 1 154383421 154384870 CTACATTGAGGGTGGACTG 59 154380720 154380740 GACTGTAGGAGCTTTATCTGG 59 NA Mus musculus 50 Prrx1 ENSMUSG00000026586 ENSMUST00000027878,ENSMUST00000075805 2 2 2 198 1 165192129 165242527 CAATGACCAGTTGAACTCTG 58 165188053 165188071 TCTTCGGTTCTGAAACCAC 59 NA DesignNoJunction Mus musculus 50 Grb14 ENSMUSG00000026888 ENSMUST00000028252,ENSMUST00000112441 2 2 2 80 2 64776539 64791631 CACATAGGTTTAGAAAGAACCG 59 64776480 64776498 ATTGTCTTCTTCCACTCCC 58 NA Mus musculus 50 2010317E24Rik ENSMUSG00000026955 ENSMUST00000028329,ENSMUST00000114293 3 2 3 277 2 25230584 25231222 GTTGAAGCAGATGAAGGAG 58 25231687 25231705 CTAAAGAGGACGAAGGCAG 59 NA DesignNoJunction Mus musculus 50 Zc3h15 ENSMUSG00000027091 ENSMUST00000081591 2 1 1 94 2 83501606 83501625 TATTTGAATTTCGTCCCGAG 57 83501682 83502314 ATCATCAACCTCATCACCA 58 NA Mus musculus 50 Snap25 ENSMUSG00000027273 ENSMUST00000028727,ENSMUST00000110098 3 2 2 101 2 136599671 136599689 AATCAGGATGGAGTAGTGG 58 136599754 136603087 GGCATCATTTGTTACCCTG 58 NA Mus musculus 50 Ppp1r14d ENSMUSG00000027317 ENSMUST00000110820,ENSMUST00000076084 2 2 2 145 2 119044565 119055279 AGGGTCAAGAAGAATCTTCTG 59 119044133 119044151 TTGACTGAGTAGCTCAGAG 58 NA DesignNoJunction Mus musculus 50 Acoxl ENSMUSG00000027380 ENSMUST00000028859,ENSMUST00000110344 1 2 2 80 2 127901661 127912105 ATTCACAGAGTTGCACTAGAG 59 127912147 127912165 CTTCATTAGCAAAGCCTGG 58 NA Mus musculus 50 Tpd52 ENSMUSG00000027506 ENSMUST00000094381,ENSMUST00000091354 1 2 4 145 3 8963849 8963867 GTTCACCTACACAGAACGT 59 8947621 8953695 TTCTTCCACCTTAGTAAGCTC 59 NA Mus musculus 50 1700021F07Rik ENSMUSG00000027518 ENSMUST00000029023 1 1 1 84 2 173351578 173353355 ATGAAAGAGCTGCTTGAGG 59 173353403 173353421 CTGGACGGACATAGAAGTG 59 NA Mus musculus 50 Hps3 ENSMUSG00000027615 ENSMUST00000012580,ENSMUST00000108321 3 2 2 80 3 19908911 19910808 GAGGATTTGATAAATGCCTGC 59 19908851 19908870 AGCTAAGGAATCAGATGTCG 59 NA Mus musculus 50 Ptx3 ENSMUSG00000027832 ENSMUST00000029421 1 1 1 60 3 66028853 66028871 CTACCACTGTAGAGATGGC 58 66028895 66028913 CCAATCTGTAGGAGTCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930443G12Rik ENSMUSG00000027880 ENSMUST00000029478 1 1 1 80 3 108915033 108915052 AAGGTTATGTTCCCAACCTG 59 108915094 108915703 AGTGATTCTTCAGAAGCTCG 59 NA Mus musculus 50 Rag1ap1 ENSMUSG00000027953 ENSMUST00000029565 1 1 1 186 3 89073862 89073991 GATGTCAACAACCTGAGCT 59 89073079 89073097 CATAACCCAGGAGAAGGAC 59 NA Mus musculus 50 Efna1 ENSMUSG00000027954 ENSMUST00000029566 1 1 1 105 3 89076522 89076707 GAGACTCCAAGCAGATGAC 59 89076435 89076454 CAGTGGTAGGAGCAATACTG 59 NA Mus musculus 50 Bxdc5 ENSMUSG00000028187 ENSMUST00000029838 3 1 1 89 3 146170650 146171114 GAAATTAAGCGAAGAGGCA 58 146170579 146170597 TCCAATAGAATGGCCTAGC 58 NA Mus musculus 50 Epb4.1l4b ENSMUSG00000028434 ENSMUST00000095076,ENSMUST00000030142 2 2 3 89 4 57100931 57101686 AAACAGATGAAAGTGGGAC 57 57100860 57100879 TGTAAATTCCTCTCGAAGGT 58 NA Mus musculus 50 Slc6a9 ENSMUSG00000028542 ENSMUST00000063857,ENSMUST00000030269,ENSMUST00000102685 2 3 3 110 4 117536152 117536297 AAGTCTTCAGGGAAAGTGG 59 117536370 117536389 GTACATGATACCCGTGAAGG 59 NA Mus musculus 50 Tnfrsf8 ENSMUSG00000028602 ENSMUST00000030339 3 1 1 80 4 144882549 144882567 AGATGCTACTGAGTTGGTG 58 144878410 144882505 TCTGCATTACCTGGATCTG 58 NA Mus musculus 50 Trim63 ENSMUSG00000028834 ENSMUST00000105875,ENSMUST00000030638 2 2 2 96 4 133879139 133880964 CTACCTTCCTCTCAAGTGC 59 133881540 133881558 ATGTTCTCAAAGCCTTGCT 59 NA Mus musculus 50 Sema3a ENSMUSG00000028883 ENSMUST00000095012,ENSMUST00000030714 3 2 2 261 5 13400044 13400063 GCCAAGACTGAAATTATCGT 58 13455602 13473413 ATTGGCACATTCTTTCAGGA 59 NA DesignRelaxed Mus musculus 50 Orc5l ENSMUSG00000029012 ENSMUST00000030872 1 1 1 80 5 22028248 22029343 CTTCCTTAAGCATCATGGG 57 22022610 22022628 GGTCCAAGAAGATGATTGC 58 NA Mus musculus 50 Nsg1 ENSMUSG00000029126 ENSMUST00000031009 1 1 1 80 5 38536052 38546858 GAGAGGTTTAAGGTCTCCG 59 38535990 38536009 CACTTTGTAGACAACCAGGA 59 NA Mus musculus 50 Zfp509 ENSMUSG00000029127 ENSMUST00000094833,ENSMUST00000075525 3 2 4 195 5 38601861 38601879 TTTGTGGGAAACACTTCTC 57 38594881 38594986 CTGAAATTGCTGAACCCTC 58 NA Mus musculus 50 Eif2b4 ENSMUSG00000029145 ENSMUST00000077693,ENSMUST00000114603 2 2 2 60 5 31491965 31491984 CTCCTATCTGCTGATTCCTG 59 31490450 31491944 CAATAGCACCTTAGAAACCTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Hnrpdl ENSMUSG00000029328 ENSMUST00000086900,ENSMUST00000031271 2 2 2 216 5 100466639 100466657 TCTTTGTGGGTGGATTGAG 59 100465982 100466108 ACTTTGATTTCGCACTTCC 58 NA DesignRelaxed Mus musculus 50 Ppef2 ENSMUSG00000029410 ENSMUST00000031359 2 1 1 80 5 92673683 92673701 GTCCTTGTTCTTCATGGTG 58 92668161 92673639 AGAAACAATCTTGTGCCTG 58 NA Mus musculus 50 Mapkapk5 ENSMUSG00000029454 ENSMUST00000111783,ENSMUST00000031410,ENSMUST00000111787 2 3 5 100 5 121988496 121989195 AAAGCTAGAAATGAGGTGC 57 121988414 121988432 TCATGAGGGAACTGTACAC 58 NA Mus musculus 50 B930006L02Rik ENSMUSG00000029461 ENSMUST00000084914,ENSMUST00000107042,ENSMUST00000049053 1 3 3 94 7 107972764 107979852 GGCTTTCAGATATACCGCA 59 107979910 107979928 GATAGGGATTGGGTGATGG 59 NA Mus musculus 50 Uba3 ENSMUSG00000030061 ENSMUST00000032142,ENSMUST00000089287 1 2 2 80 6 97136140 97136244 AAGATAGCTACAAGTGCGT 58 97136078 97136096 AAACGTGTAAGTGTACAGC 57 NA Mus musculus 50 MGI:1889515 ENSMUSG00000030188 ENSMUST00000032307 2 1 1 93 6 131234739 131235672 AAATCAGTCAAAGGATCCTG 57 131234665 131234683 GAAGTGTAGACCAATGAGG 57 NA Mus musculus 50 Lmo3 ENSMUSG00000030226 ENSMUST00000067437 3 1 1 96 6 138325836 138364943 TATCTGAGGCTGTTTGGTG 59 138325758 138325777 GGTACACATTATCCTTGGCA 59 NA Mus musculus 50 Tnfrsf1a ENSMUSG00000030341 ENSMUST00000032491 2 1 2 81 6 125307451 125307748 GTCGGAAAGAAATGTCCCA 59 125307793 125307811 AACTGGTTCTCCTTACAGC 59 NA Mus musculus 50 Slc7a10 ENSMUSG00000030495 ENSMUST00000001854 2 1 1 80 7 35984640 35984658 TACGGAGTCACTATCCTGG 59 35984701 35985306 GAGGAGGTTCACCTTAATGG 59 NA Mus musculus 50 Prmt3 ENSMUSG00000030505 ENSMUST00000107607,ENSMUST00000085271,ENSMUST00000032715 3 3 3 119 7 57035705 57035724 TTTCACACTGTAAGTTGGAG 57 57036533 57037324 CAACCGTAGGATTCTTAAGTC 58 NA Mus musculus 50 Unc45a ENSMUSG00000030533 ENSMUST00000107368,ENSMUST00000032748 1 2 2 81 7 87472516 87472534 AGGACTGCAGAACTTTGAG 59 87471297 87472471 CTTCAGGATCTTCTGCCTG 59 NA Mus musculus 50 Tmem126b ENSMUSG00000030614 ENSMUST00000032843 1 1 1 80 7 97617661 97618089 TGGCAGTTAAGTATCAGACTG 59 97617601 97617619 TCCCAGTTTGACAAAGGAG 59 NA Mus musculus 50 Zfand6 ENSMUSG00000030629 ENSMUST00000069537 3 1 1 80 7 91781170 91781189 TATCTGAGACAGAAGACCTG 57 91766462 91769385 CTGATACTGAAGATGGAGGA 57 NA Mus musculus 50 Coq7 ENSMUSG00000030652 ENSMUST00000098090,ENSMUST00000032887 3 2 2 82 7 125670898 125670917 TCACTACAACAACCAGATCC 59 125669391 125670853 GAAACTGCTTGATGACCTG 58 NA Mus musculus 50 Arl6ip1 ENSMUSG00000030654 ENSMUST00000032888 1 1 1 80 7 125264728 125264746 TGATCATTTCTCTTGCTGC 58 125263916 125264686 CAAATGTCACAATCAGGTAGG 58 NA Mus musculus 50 Nucb2 ENSMUSG00000030659 ENSMUST00000032895 1 1 1 80 7 123671324 123671519 AGTTAATCATCCCGGAAGC 59 123671563 123671581 GGGTCAAAGTCATTAGGGT 58 NA Mus musculus 50 Trat1 ENSMUSG00000030775 ENSMUST00000099715,ENSMUST00000071647 1 2 2 123 16 48740369 48742320 TAATCCCAGAACCACTGGA 59 48735119 48735137 TAGCACATCTGAGCTTCAG 59 NA Mus musculus 50 BC051019 ENSMUSG00000031022 ENSMUST00000106735,ENSMUST00000033334 1 2 2 272 7 116864055 116864073 ATCTGGCTCAGATAAAGGC 59 116859993 116861449 CTTTAGATGCTCTTTGTCCT 57 NA DesignRelaxed Mus musculus 50 Glrx3 ENSMUSG00000031068 ENSMUST00000064404 3 1 1 84 7 144636760 144644387 CATTTGTGAAGCTGGAAGC 59 144644435 144644453 TTGAAGAACAGGAAGGTGG 59 NA Nonspecific Mus musculus 50 4931400O07Rik ENSMUSG00000031194 ENSMUST00000033537 3 1 1 60 X 59721458 59721652 AGGGAAATAAGAAGGTCTGG 58 59721675 59721693 AAACTGTCTTCAAGTACCG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Efnb1 ENSMUSG00000031217 ENSMUST00000052839 3 1 1 87 X 96340901 96341829 CATTACATCAACGTCCAATGG 59 96341876 96341896 CATAACGATCTTCATAGTGCG 58 NA Mus musculus 50 Mfap3l ENSMUSG00000031647 ENSMUST00000034066 3 1 1 65 8 63135665 63135683 GACGAGAAGGAGAAAGGAG 59 63149846 63149864 CTTGGTGATGTTCAGGAGG 59 NA DesignNoJunction Mus musculus 50 Bean ENSMUSG00000031872 ENSMUST00000093245 2 1 1 110 8 106734969 106734987 CATCAGAAGGGACAGACAG 59 106735061 106738923 CCTCCAGATGCGTATTCTC 59 NA Mus musculus 50 Abhd12 ENSMUSG00000032046 ENSMUST00000056149 2 1 1 80 2 150674184 150684104 TAAATTTCGTGAGGGTTCC 57 150674122 150674140 GGTAGTAATTGCAGGTGTG 58 NA Mus musculus 50 Mcam ENSMUSG00000032135 ENSMUST00000034650,ENSMUST00000098852 3 2 2 97 9 43945381 43946929 GGAGAACCGAGTTCATATCC 59 43946989 43947007 TGTCTTCCTTAACTAGGCG 58 NA Mus musculus 50 Scg3 ENSMUSG00000032181 ENSMUST00000034699 3 1 1 80 9 75524610 75529781 CAAGTTTCAAGATGACCCAG 58 75524549 75524568 GCAATCTTATGGACGATGTC 58 NA Mus musculus 50 Punc ENSMUSG00000032394 ENSMUST00000034961 1 1 1 89 9 64992292 64992311 TGAGGGTGACTATGAATGTG 59 64992363 65025214 AAGTCGGACATAGTTGCAG 59 NA Mus musculus 50 Tgfbr2 ENSMUSG00000032440 ENSMUST00000061101,ENSMUST00000035014 3 2 2 105 9 116019411 116038941 TTCGGAAGAATACACCACC 59 116019324 116019342 GATGATGACAGCTATGGCA 59 NA Mus musculus 50 Mras ENSMUSG00000032470 ENSMUST00000035045 3 1 1 92 9 99295032 99311820 TCTTGGATGTTCTGGACAC 59 99294958 99294976 AGTAGACAATGAGGAAGCC 58 NA Mus musculus 50 Scn5a ENSMUSG00000032511 ENSMUST00000065196 2 1 1 80 9 119448868 119452455 TTCAGTTATTCCAGGCCTG 59 119448806 119448824 GTAAGGACCATCACATCGG 59 NA Mus musculus 50 Amotl2 ENSMUSG00000032531 ENSMUST00000035121 1 1 1 183 9 102631741 102631759 GTATTTGGAAGAACGGGCT 59 102631906 102632313 ATGGAGCACCTTCAATCTG 59 NA Mus musculus 50 Pon2 ENSMUSG00000032667 ENSMUST00000057792,ENSMUST00000047700 1 2 2 118 6 5227918 5239021 AAGGAATCGAAACTGGAGC 59 5223113 5223131 TATCCCTCCAGGCTTATCC 59 NA Mus musculus 50 Exdl2 ENSMUSG00000032705 ENSMUST00000038185 1 1 1 84 12 81581629 81581648 AGCTTCTACAGGATTATGGT 57 81581693 81585247 CAGAGTATATTGTTTCCCTGC 58 NA Mus musculus 50 D430042O09Rik ENSMUSG00000032743 ENSMUST00000069660 2 1 2 167 7 133012356 133014167 CCAGAACAATATTGCTGCC 59 133015665 133015684 ATGACATACACTCGGTTCAC 59 NA Mus musculus 50 Slc24a6 ENSMUSG00000032754 ENSMUST00000076051,ENSMUST00000068326,ENSMUST00000111890 1 3 3 170 5 120971098 120971117 CTTCACTGCACTCTATCTCG 59 120971868 120974023 GACTCAGACAGCAACTCTG 59 NA Mus musculus 50 Atg12 ENSMUSG00000032905 ENSMUST00000035648 3 1 1 98 18 46897124 46897142 AACAAAGAAATGGGCTGTG 58 46894967 46897062 ATAAACAACTGTTCCGAGG 57 NA DesignNoJunction Mus musculus 50 4833424O15Rik ENSMUSG00000033342 ENSMUST00000106473,ENSMUST00000039564 2 2 2 80 3 117365477 117365498 CGGAATATCGAAATCATTGGTC 59 117365537 117374827 CGCATACAACCAGAAATACTG 59 NA Mus musculus 50 Vav1 ENSMUSG00000034116 ENSMUST00000005889 3 1 4 165 17 57451258 57451276 TTCTGATGGGACCTATCTG 57 57454748 57458062 CTCTACCAGTTCCAGAAGG 58 NA Mus musculus 50 Six4 ENSMUSG00000034460 ENSMUST00000110487,ENSMUST00000043208 3 2 2 105 12 74209723 74209741 ATCCCTAATTCTGGAGCCA 59 74205214 74209657 CTGAAAGATTACCTTGTGAAGC 59 NA Mus musculus 50 Pof1b ENSMUSG00000034607 ENSMUST00000039887,ENSMUST00000113391 1 2 2 81 X 109760368 109760389 GGCAATCATTATATGGAGATGG 58 109758972 109760327 GGTTTAATTGGGACCTTAGC 58 NA Mus musculus 50 Pof1b ENSMUSG00000034607 ENSMUST00000039887,ENSMUST00000113391 3 2 2 82 X 109775479 109777766 CACGAACAGGTGATAATTCAG 59 109775417 109775435 CGACTTAGATCAGCAAGCA 59 NA Mus musculus 50 2510012J08Rik ENSMUSG00000034889 ENSMUST00000050867 2 1 1 231 10 80785953 80785971 CACTTTAAGACGTGGGAGG 59 80786518 80786664 CCATGTACACCTGGATGTC 59 NA DesignRelaxed Mus musculus 50 Wdr38 ENSMUSG00000035295 ENSMUST00000039535,ENSMUST00000112872 1 2 2 83 2 38856427 38856448 CATACCATTTGGGTGAATAGTC 58 38856492 38856690 GACTTTGACCGTACGAGAG 59 NA Mus musculus 50 3230401D17Rik ENSMUSG00000035399 ENSMUST00000046908 2 1 1 60 2 163241302 163241320 GAGGAAAGTCTGCAAACTG 58 163237236 163241278 ATATGATGGACCCTGATGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Npffr2 ENSMUSG00000035528 ENSMUST00000048557 2 1 1 83 5 90000693 90011670 ATAGCTGTGGACAGATTCC 58 90011716 90011735 GATCACAATCGTGACAAAGG 59 NA Mus musculus 50 Prkx ENSMUSG00000035725 ENSMUST00000036333,ENSMUST00000114044 2 2 2 81 X 75027429 75027447 AACATCCTTCTAGACAGGG 57 75018564 75027384 GAGTCCATGTCCTATCCAC 58 NA Mus musculus 50 B230312A22Rik ENSMUSG00000036002 ENSMUST00000107957,ENSMUST00000107956,ENSMUST00000107959,ENSMUST00000107958,ENSMUST00000036462 3 5 5 192 4 43047339 43047357 TTACTGCAGAGATTGGAGC 59 43046846 43046963 GGGTTAAATAAGGTCACTTGG 58 NA Mus musculus 50 Lrrk2 ENSMUSG00000036273 ENSMUST00000060642,ENSMUST00000036421 3 2 2 80 15 91626531 91626551 TAGGATTATGGAGGGTTTGAG 58 91626593 91627865 TCTTTAACTGGATCTGGCA 58 NA Mus musculus 50 Snapc4 ENSMUSG00000036281 ENSMUST00000114115,ENSMUST00000035427,ENSMUST00000114111 1 3 3 80 2 26225504 26226316 ATATGGTGTTGGTCACTGG 59 26225442 26225460 ATCTTCCACTTGCTCAGAC 59 NA Mus musculus 50 Tcte3 ENSMUSG00000036648 ENSMUST00000073074 2 1 2 67 17 15132908 15138959 CCAGCAGATATTAAAGATTGCC 59 15132862 15132880 TAGCTTCTACCCAGTTGTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Spryd3 ENSMUSG00000036966 ENSMUST00000044757,ENSMUST00000100176 1 2 2 80 15 101962365 101963856 ACACTTTGAGTTACCATGGA 58 101962304 101962323 AATAATTGCTGTCCTTGGTC 58 NA Mus musculus 50 Tfb1m ENSMUSG00000036983 ENSMUST00000041003 2 1 1 81 17 3543243 3545595 CAGTGGGAAGATGATCCTC 59 3543180 3543199 GCCACTTGATAATCAGTGGA 59 NA Mus musculus 50 Hk1 ENSMUSG00000037012 ENSMUST00000099691,ENSMUST00000116238 2 2 2 60 10 61732799 61734349 AACTCCATCCACACTTCTC 58 61732757 61732775 CACTTTGGTGACAGTTCCT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ss18 ENSMUSG00000037013 ENSMUST00000092041 3 1 4 220 18 14795120 14798777 ATTACCCTGATGGAAACTCC 59 14792100 14792118 CTGTGTTGGTCTATAGCCC 59 NA DesignRelaxed Mus musculus 50 1700125F08Rik ENSMUSG00000037247 ENSMUST00000036304 2 1 1 202 10 60391553 60392081 CTAACCTAGCCTCATAATGTG 57 60391371 60391389 GGAATGACAACTTGATGGC 59 NA DesignNoJunction, InUTR Mus musculus 50 Enpp1 ENSMUSG00000037370 ENSMUST00000105520,ENSMUST00000039882 2 2 2 80 10 24369099 24369118 GTCCTGTGCATAAATGTTCC 59 24367892 24369057 CTCTATTTAGTCTCGGTGGC 59 NA Mus musculus 50 Spon2 ENSMUSG00000037379 ENSMUST00000046186 1 1 1 96 5 33559050 33559068 CTTTATCCACACGATGCAG 58 33558363 33558990 AGGCTGTTATCTCAGTCAC 58 NA Mus musculus 50 Wdr19 ENSMUSG00000037890 ENSMUST00000041892,ENSMUST00000113784 1 2 2 80 5 65612900 65612919 CTGAATGAACCAGATAACCC 57 65612959 65613238 ATCTCCATACCAACTATAGCAG 58 NA Mus musculus 50 Scarb1 ENSMUSG00000037936 ENSMUST00000086075 3 1 1 83 5 125761529 125761547 CATTCAGGCCTACTCTGAG 59 125758225 125761482 TCTTCAGGACCCTATAGCT 58 NA InUTR Mus musculus 50 1110007C09Rik ENSMUSG00000037960 ENSMUST00000048946 1 1 1 255 13 49303498 49311306 GATCAGACCTACTGTGACC 58 49300603 49300621 CATGGATGTACAGAGCTCG 59 NA DesignNoJunction Mus musculus 50 Wnk2 ENSMUSG00000037989 ENSMUST00000110097,ENSMUST00000049265,ENSMUST00000035538,ENSMUST00000110096,ENSMUST00000091623 2 5 5 80 13 49186237 49186256 AAGACAATGGAGCCATAGAG 59 49180901 49186195 CAGAATCGATCATTTCCTGG 58 NA Mus musculus 50 Trp53inp2 ENSMUSG00000038375 ENSMUST00000109676,ENSMUST00000043237 1 2 2 87 2 155211123 155211141 CTGAAGACTCCAACTGTCC 59 155211191 155211626 GTATAGCTGTCCTGTAGGTC 58 NA Mus musculus 50 Rgs4 ENSMUSG00000038530 ENSMUST00000027991 2 1 1 97 1 171674641 171674816 TCACCATGAATGTGGACTG 59 171674562 171674580 TCTTGTACTCCTCACAGCT 59 NA Mus musculus 50 Zfp280d ENSMUSG00000038535 ENSMUST00000098576,ENSMUST00000043096,ENSMUST00000062088 2 3 3 81 9 72178908 72178926 TGCAGAAGAAACAAAGCAC 59 72178970 72179108 CGACGTAACCTTAAGTTCCT 59 NA Mus musculus 50 1110054O05Rik ENSMUSG00000038544 ENSMUST00000095063,ENSMUST00000107526,ENSMUST00000116331 1 3 3 99 4 59786840 59786858 CTCTTACCAAGGACTTCCG 59 59785303 59785321 AAGTAGCCAGAGGAATGTG 58 NA DesignNoJunction Mus musculus 50 Degs1 ENSMUSG00000038633 ENSMUST00000035295 1 1 1 74 1 184209140 184209158 TCATAACGAGCACCATGAC 59 184207002 184207020 TACTCACTTGCGATCTTCC 59 NA DesignNoJunction Mus musculus 50 Akap2 ENSMUSG00000038729 ENSMUST00000102903 3 1 14 178 4 57869767 57869785 GATCGAAGAAGAGATCCGG 59 57905758 57905776 ACTCTTCCTCCGATTAACC 58 NA DesignNoJunction, InUTR Mus musculus 50 Cables2 ENSMUSG00000038990 ENSMUST00000038667,ENSMUST00000108891 1 2 2 115 2 179994878 179994987 TTATTGACAAGCTGGAGGA 58 179994781 179994799 TAACACTTGGTTCTCTGGG 58 NA Mus musculus 50 Isg20 ENSMUSG00000039236 ENSMUST00000038151 3 1 2 99 7 86061607 86064603 CAAGAACATCCAGGTCCTG 59 86064666 86064684 GACCATTCCGACATAGAGC 59 NA Mus musculus 50 2410089E03Rik ENSMUSG00000039801 ENSMUST00000110617,ENSMUST00000053264 2 2 3 80 15 8137569 8138395 CAGGTCACAGATTGATTGC 58 8138437 8138457 GAGTTCTTTGGCTTAACTGTG 59 NA Mus musculus 50 Spsb1 ENSMUSG00000039911 ENSMUST00000038562,ENSMUST00000105685,ENSMUST00000105684 2 3 3 60 4 149280692 149280711 ACATTCATTGTCCCTGACTC 59 149280651 149280670 AACTTAAGGTCCCATCATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bahd1 ENSMUSG00000040007 ENSMUST00000036578 3 1 1 127 2 118745239 118745938 AGTGTATGTCCTGGATGAG 58 118746029 118746047 GTGTAGACGTCTTTCTTGG 57 NA Mus musculus 50 Rbms2 ENSMUSG00000040043 ENSMUST00000099139,ENSMUST00000092033,ENSMUST00000105247,ENSMUST00000076233 2 4 4 192 10 127580603 127582741 ACAAATGGCAAAGCAACAG 59 127575232 127575250 ACACTTCTCTGTTGACTCC 58 NA Mus musculus 50 Gpr26 ENSMUSG00000040125 ENSMUST00000045840 2 1 1 122 7 139166059 139175772 CTATGTGATTACCAGGCTGG 59 139175857 139175875 AGCAAGGAATACACGAAGG 59 NA Mus musculus 50 Tdrd6 ENSMUSG00000040140 ENSMUST00000045717 1 1 1 87 17 43757436 43757454 TTCAAATGGTGTGGAGGAG 59 43754174 43757385 GAATACAGCCTCAGAAGGT 58 NA Mus musculus 50 Ccdc114 ENSMUSG00000040189 ENSMUST00000038720 2 1 2 80 7 53197551 53197953 AAATACCTGGAGTTGGAGG 58 53197997 53198015 CTGAAGGTGGTGTATCTCG 59 NA Mus musculus 50 Plekha1 ENSMUSG00000040268 ENSMUST00000106198,ENSMUST00000075181,ENSMUST00000048180 1 3 3 98 7 138045748 138048391 AAATCTGAACTGGAGAAGGA 58 138048906 138048926 GTTGTCCCTCATCATTATGTC 58 NA Mus musculus 50 Trim7 ENSMUSG00000040350 ENSMUST00000109215 3 1 4 151 11 48652842 48652861 AATTAGAGGTTTCTGGCTGG 59 48652974 48653440 CTAACCTAAGGGCTTCTCTG 59 NA InUTR Mus musculus 50 Q6UJB9-2 ENSMUSG00000040576 ENSMUST00000047305 3 1 1 95 5 135378461 135378479 CATCACTTTAGTCTGGGCT 58 135377789 135377807 AGAGCATTGGTAAGGACTG 58 NA DesignNoJunction Mus musculus 50 Dnajc16 ENSMUSG00000040697 ENSMUST00000038014 2 1 1 81 4 141322447 141322465 CAGACAAAGAGGAAGTCCC 59 141320639 141322403 TTCTTAGGAATCTTGCTGCT 59 NA Mus musculus 50 Slc25a34 ENSMUSG00000040740 ENSMUST00000038661 3 1 1 173 4 141178411 141179199 CTTACCTGGTCAAGACACAG 59 141178172 141178190 CTGAACCTACTGTGACTCG 59 NA DesignNoJunction Mus musculus 50 Iqcf4 ENSMUSG00000041009 ENSMUST00000085111,ENSMUST00000047010 3 2 2 117 9 106472954 106472973 GAAACAAGGAAACAACAGCA 59 106471094 106472876 GTAGGGATAGCTCTAACTTCG 59 NA Mus musculus 50 OTTMUSG00000010750 ENSMUSG00000041735 ENSMUST00000036876 1 1 1 66 4 144295147 144305211 CGTATGTGGAAGTCTGGAC 59 144295099 144295117 CACTGAGTCTGTCTCATGG 59 NA DesignNoJunction Mus musculus 50 Tmem45b ENSMUSG00000041737 ENSMUST00000048050 3 1 1 81 9 31234535 31235548 CCCTTGTTTACTGCTTTCTG 59 31234473 31234492 TGATCAGACTTCAGCTTCTG 59 NA Mus musculus 50 Plekha6 ENSMUSG00000041757 ENSMUST00000038295,ENSMUST00000086504,ENSMUST00000086505 1 3 3 80 1 135179872 135179890 TATGAGAACCTCGAATCGG 58 135179933 135181465 CACCTCATTCTGGATATCCA 58 NA Mus musculus 50 Setd1a ENSMUSG00000042308 ENSMUST00000047075,ENSMUST00000047157 1 2 2 80 7 134922104 134923907 CCTAAGTTTAAGCTGGATGAG 58 134923949 134923967 CACATTGTCATTGAGCCTC 58 NA Mus musculus 50 Abra ENSMUSG00000042895 ENSMUST00000054742 3 1 1 60 15 41701127 41701145 ACCCTGGTTATCAATTTGG 57 41701085 41701105 GTTTGGTACTGTTCTCATTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Notum ENSMUSG00000042988 ENSMUST00000106177,ENSMUST00000106178 1 2 3 123 11 120519680 120519698 TATTCTATCCTCCCAGCCA 59 120518899 120519210 GGCATATTCATTCTTGTCAGAC 59 NA Mus musculus 50 Pnpla1 ENSMUSG00000043286 ENSMUST00000056866,ENSMUST00000114737 1 2 2 80 17 29022579 29023798 GCTAGCAAACTGAAGTCTG 58 29023841 29023860 ATGAGGTTTATAGGTGACCC 58 NA Mus musculus 50 Olfr30 ENSMUSG00000043314 ENSMUST00000055204 1 1 1 60 11 58268549 58268568 GAACAAGGAAGTTACAGGAG 57 58268508 58268526 ATTTCTATTGACGCCACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc141 ENSMUSG00000044033 ENSMUST00000111833 3 1 4 90 2 77006630 77006649 CAATCTCCTCGAAATTGGGA 59 77000345 77006578 CTCACTTTGCTTAAGCTTGG 59 NA Mus musculus 50 Ankrd43 ENSMUSG00000044352 ENSMUST00000104955 3 1 1 174 11 53291904 53291922 GAAGTCAAGTTCCTTCAGC 58 53291748 53291766 TAGCTCCAATGCCATTCAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 AB041803 ENSMUSG00000044471 ENSMUST00000115107,ENSMUST00000050386 3 2 2 154 6 31131133 31147781 CTGCATCTCGTTGATTCCT 59 31116614 31116632 CAGAGTCAGGTATCTGTGC 59 NA DesignNoJunction Mus musculus 50 1700029I15Rik ENSMUSG00000044916 ENSMUST00000054316 1 1 2 105 2 92223435 92223619 GATGACTATGGGCTCAGAC 59 92223688 92223706 AATAGTCAGCCATGTTGGG 59 NA DesignNoJunction Mus musculus 50 4933411O13Rik ENSMUSG00000045178 ENSMUST00000050665 3 1 1 60 16 66892883 66892901 AATCCTGTAGACCAGATCC 57 66892925 66892943 GGTATCAGAGTGTGATGCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr734 ENSMUSG00000045306 ENSMUST00000050928 1 1 1 60 14 50939768 50939787 CTTGTTATTCCCACATCACC 58 50939727 50939748 GCATAAATGTAGATGGATGGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 B3gat1 ENSMUSG00000045994 ENSMUST00000115269,ENSMUST00000067362,ENSMUST00000067400 3 3 3 114 9 26564513 26564532 CTACTTTAAGCTACGTGGTG 57 26564609 26565286 GACCAAGATCTTGGTACAG 57 NA Mus musculus 50 NR_002687.1 ENSMUSG00000046687 ENSMUST00000053865 1 1 1 60 10 61534577 61534595 CCAACATCAAAGATGGCAC 59 61534618 61534637 TCGTTCAGGTACATGAAGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Epm2aip1 ENSMUSG00000046785 ENSMUST00000060711 3 1 1 60 9 111175966 111175986 CTATTTCTGTAAGAGTGGAGC 57 111176008 111176026 TACTCATTCCACAGGTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp286 ENSMUSG00000047342 ENSMUST00000108705 3 1 2 81 11 62594578 62597183 AGTGACTCAGCTATTCGTC 58 62594515 62594533 GATCTGACGCTCTTACTGG 59 NA Mus musculus 50 E430004N04Rik ENSMUSG00000049109 ENSMUST00000056097,ENSMUST00000105515,ENSMUST00000105516,ENSMUST00000060409 1 4 4 89 10 28442367 28442385 ATGGCTGAAATTTGTGAGG 58 28442438 28480974 GACCTTAAAGAGACCTGGA 57 NA Mus musculus 50 Mtag2 ENSMUSG00000049661 ENSMUST00000058665 1 1 1 110 7 52622608 52622626 CACCTGAATCTAGTAGCGC 59 52622700 52622718 TGTTGAATTCCTATCCCGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 EG237009 ENSMUSG00000050435 ENSMUST00000059509 1 1 1 60 X 112019390 112019408 TTATGTGATCCAAACGCAG 58 112019432 112019450 CCTTGTGGTAGACTTTAGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxl22 ENSMUSG00000050503 ENSMUST00000056890 1 1 1 71 9 66362242 66362260 GAGATGTGTTTGAGGACCC 59 66362189 66362207 TGTCTTTCTTGAGCTCTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr986 ENSMUSG00000051095 ENSMUST00000062229 2 1 1 60 9 39994719 39994738 AATCACTGAGTTCATCCTCC 59 39994761 39994779 GAAGAGAAGGGCTTCTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4933427I18Rik ENSMUSG00000051125 ENSMUST00000056790 2 1 1 96 13 24159026 24159045 GAATCCAGGATCTCATCGAC 59 24159102 24159359 GCTAAATCTTTCAAGCTGCTC 59 NA Mus musculus 50 Tacstd2 ENSMUSG00000051397 ENSMUST00000058178 2 1 1 82 6 67485100 67485118 ATTCAGATAGAGCTTCGGC 59 67485036 67485054 CTTTCGAAGTAGTAGGCGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rps19bp1 ENSMUSG00000051518 ENSMUST00000052499 3 1 1 62 15 80091809 80094416 CTAGCTGAGTACCAGAAACG 59 80091766 80091786 GGTCATAAACTTCAGGTTTGC 59 NA DesignNoJunction Mus musculus 50 4930533L02Rik ENSMUSG00000051614 ENSMUST00000060220 2 1 1 60 7 132462217 132462235 GACCAAGCTCACAAATCAG 58 132462259 132462277 TATGTCATCCCATTTGCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Btla ENSMUSG00000052013 ENSMUST00000063654,ENSMUST00000102802,ENSMUST00000114589 2 3 3 105 16 45246401 45250473 CACTAACCTGGTTGATATTCCA 59 45250539 45250557 TTCATCCTGCATGCTAGAC 59 NA Mus musculus 50 Slc6a7 ENSMUSG00000052026 ENSMUST00000025520 3 1 1 81 18 61163014 61163155 TCAGAACATCTACAGAGACAC 58 61162953 61162971 CGAGAAGATAGCAAAGCCA 59 NA Mus musculus 50 Lrrc33 ENSMUSG00000052384 ENSMUST00000099991,ENSMUST00000115163 3 2 3 157 16 32147685 32147704 TTGATTGTGGAATGGAGGAG 59 32145000 32145018 TTAGCATCCAGAATGAGCA 58 NA DesignNoJunction Mus musculus 50 Rexo4 ENSMUSG00000052406 ENSMUST00000064244,ENSMUST00000114020,ENSMUST00000114019 2 3 3 160 2 26818032 26818050 TACCTCCCACAGATACCTC 59 26816248 26817908 CCAGATGTCTTCCTCAGTG 59 NA Mus musculus 50 Bmpr1b ENSMUSG00000052430 ENSMUST00000029948,ENSMUST00000106232,ENSMUST00000098568,ENSMUST00000106230 2 4 4 80 3 141505972 141508053 TGTGTTTCTGGAGGTATAGTG 59 141505912 141505931 CATGTCCTCATAAGAAGGGT 58 NA Mus musculus 50 9430076C15Rik ENSMUSG00000053007 ENSMUST00000114409 1 1 3 162 6 53554572 53560423 TCTTGATGCCTATGGAGAG 58 53595312 53595330 CTATGAAGACACAGAGCCA 58 NA Mus musculus 50 OTTMUSG00000007639 ENSMUSG00000053263 ENSMUST00000065594 2 1 1 61 11 3207205 3207223 CTCTACTCGGCTAGATCCT 59 3207162 3207181 TGTAGACCTTGTATAAGCGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Slc25a40 ENSMUSG00000054099 ENSMUST00000066921 2 1 1 87 5 8452758 8452776 TGGATATGTCAACCTGGAC 58 8452824 8453210 ACTAATCGAGGAATTAGACCTG 59 NA Mus musculus 50 Fabp1 ENSMUSG00000054422 ENSMUST00000067492 2 1 1 187 6 71151693 71151711 CTATGGACCCAAAGTGGTC 59 71153167 71154910 CCAATGTCATGGTATTGGTG 58 NA Mus musculus 50 Cadps ENSMUSG00000054423 ENSMUST00000067491,ENSMUST00000112658,ENSMUST00000112657 1 3 3 81 14 13298504 13299547 CCGTACAGACTATAATTTGTGC 59 13298444 13298465 CACATATCTAACAACAAGTGGG 59 NA Mus musculus 50 Atpif1 ENSMUSG00000054428 ENSMUST00000067496 2 1 1 117 4 132089285 132089397 GTCGGATAGCATGGATACG 59 132086714 132086732 AGCCAGCTGTTCTTTAGTC 59 NA DesignNoJunction Mus musculus 50 Olfr308 ENSMUSG00000054498 ENSMUST00000044256 3 1 1 60 7 93470293 93470313 AGTACTTCACACCAGTTACAG 59 93470253 93470272 CTAAGAATGACAGGTTGCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000054546 ENSMUSG00000054546 ENSMUST00000067671 2 1 1 60 15 27505510 27505528 CTCTCACCATCTTACCCTC 58 27505468 27505487 CAGACACTTAGAAAGCAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1600014C10Rik ENSMUSG00000054676 ENSMUST00000067854 3 1 1 164 7 38979784 38979804 TCAGATCTTAATGGAGCTGC 59 38979931 38979949 ACATAGGTCGTTAGCATGG 59 NA DesignNoJunction Mus musculus 50 Olfr420 ENSMUSG00000055033 ENSMUST00000068403 3 1 1 60 1 176089655 176089674 TTTGCTCTTCTTTGGTAGTG 58 176089697 176089715 CAAGGAGTAGGTAGCAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Commd5 ENSMUSG00000055041 ENSMUST00000068407,ENSMUST00000109793 3 2 2 60 15 76731412 76731430 CCATAGCCAAATTCCAGGA 59 76731454 76731472 TCTGCCATCTCCTTAAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC042720 ENSMUSG00000055567 ENSMUST00000114009,ENSMUST00000061620,ENSMUST00000114008 3 3 5 102 1 66520014 66520032 GAAGAGAACAACCGAAGGA 59 66520095 66529824 GATCAGATTCCTTTATCCTGTG 58 NA Mus musculus 50 EG277333 ENSMUSG00000055676 ENSMUST00000050581 1 1 1 60 1 182258186 182258204 ATTGACCTCGACTACATGG 58 182258144 182258162 CGTTGAATTTACTGTGGGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem150 ENSMUSG00000055912 ENSMUST00000069695 2 1 1 80 6 72306295 72306722 CATATGGACTGTGTATGCC 57 72307046 72307064 GAGCAGGATTCATTGTAGG 57 NA Mus musculus 50 Ccdc18 ENSMUSG00000056531 ENSMUST00000047677,ENSMUST00000100945 1 2 2 102 5 108565147 108567937 AGAAATCAAGAGATCAGGTGTC 59 108568000 108568018 AAACAAGCATTCTGTTGCC 59 NA Mus musculus 50 Krt72 ENSMUSG00000056605 ENSMUST00000071104 3 1 1 80 15 101610675 101611345 CAGTGTAAGATCCAGGAGC 59 101610613 101610632 CTCTGTGATCTCAGACTTGG 59 NA Mus musculus 50 Nfil3 ENSMUSG00000056749 ENSMUST00000071065 1 1 1 60 13 53063839 53063857 GGTTTAATTAGCTCCACGG 58 53063797 53063815 CAGCTGTGGAATTACTGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Homez ENSMUSG00000057156 ENSMUST00000081162,ENSMUST00000059770 1 2 2 60 14 55475679 55475697 TTGGACTGGTTTGACTCTC 59 55475637 55475658 CTTCATCTAGACAAACTACCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 E2f6 ENSMUSG00000057469 ENSMUST00000020908 1 1 2 80 12 16828947 16828966 TGAACAGATTGTCATTGCAG 58 16829006 16831389 ACTGTGATAGAATCTTCTCTGG 59 NA Mus musculus 50 Krtap16-1 ENSMUSG00000057650 ENSMUST00000076186 1 1 1 61 16 88874128 88874146 TTCAGAGGCTATGGATGTG 58 88874085 88874103 CTGGAGAACCCATATCCTC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Zfp420 ENSMUSG00000058402 ENSMUST00000057652,ENSMUST00000074876 2 2 2 81 7 30657939 30659203 TTGACTTCTCTAAGGCTTGC 59 30659247 30659265 TCCCACTGACACAATTCTG 59 NA InUTR Mus musculus 50 NP_001074763.1 ENSMUSG00000058741 ENSMUST00000080288 3 1 1 122 7 26088437 26088456 CATAAGAACCTTACAGGGCT 59 26088625 26088643 GAAGATGCCATCCTCTGTC 59 NA DesignNoJunction Mus musculus 50 Olfr482 ENSMUSG00000059031 ENSMUST00000081184 2 1 1 60 7 115238563 115238581 AATTTGCTCTTCTGTGGAC 57 115238521 115238540 TCAAAGGATCGAAATCACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Stfa2l1 ENSMUSG00000059657 ENSMUST00000079184 3 1 1 89 16 36160126 36161846 TCATTAAGATGGATGTAGGACG 59 36161896 36161914 AACCAGTGAGTTCCAAGTC 59 NA Nonspecific Mus musculus 50 Zfp637 ENSMUSG00000059689 ENSMUST00000112861 3 1 3 125 6 117792125 117793281 GAGTTCAGGTTCTCCAGAC 59 117793368 117793388 GTATCTTCCATGACAGTCCAG 59 NA InUTR Mus musculus 50 Olfr996 ENSMUSG00000059990 ENSMUST00000077075 2 1 1 65 2 85420132 85420150 GGCAACTGTCTCTATCCTG 59 85420179 85420197 GAGGAACTGACATTGGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr805 ENSMUSG00000060089 ENSMUST00000078876 2 1 1 62 10 129160433 129160451 GATCTTCGCCTCAAGACTC 59 129160389 129160407 TGCCATTTCCAAGAAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000060559 ENSMUSG00000060559 ENSMUST00000074466 3 1 1 123 8 48498640 48498658 ATCTGCAGAAACTTCTCCA 58 48498745 48498763 CAAGACTCTGACTCTCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 B2m ENSMUSG00000060802 ENSMUST00000102476 2 1 1 84 2 121976819 121976838 CTGAGACTGATACATACGCC 59 121976885 121977398 GATCACATGTCTCGATCCC 59 NA InUTR Mus musculus 50 9330158F14Rik ENSMUSG00000061171 ENSMUST00000112420,ENSMUST00000112419,ENSMUST00000052111,ENSMUST00000112416,ENSMUST00000080413 3 5 6 80 2 65196237 65199394 ATACATCACAGACTTCTCCC 58 65196176 65196196 TTAACCAAAGACTGGTAGGAG 59 NA Mus musculus 50 V1rc32 ENSMUSG00000061208 ENSMUST00000078186 2 1 1 72 6 56986788 56986809 CCTTTGGTACAAATCAGTTCTG 59 56986842 56986860 TCAAATGGTGCTTTGACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cyp2d22 ENSMUSG00000061740 ENSMUST00000023083 1 1 1 83 15 82204478 82204737 CGCTCTCAAGGTATAGTCC 58 82204413 82204431 AAAGTGGTGCATGGTAGAC 59 NA Mus musculus 50 Olfr294 ENSMUSG00000062042 ENSMUST00000078588 1 1 1 60 7 93765019 93765039 AGTAACCTACTTCTCATCACG 58 93764979 93764997 AGTACATGGGTGTTTGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mapk3 ENSMUSG00000063065 ENSMUST00000057669 1 1 1 82 7 133906727 133906918 TGCGACCTTAAGATCTGTG 59 133906964 133906982 ACATACTCCGTCAGAAAGC 59 NA Nonspecific Mus musculus 50 Syt10 ENSMUSG00000063260 ENSMUST00000029441 1 1 1 88 15 89623124 89644501 CTACCACAGAAAGCATAGAC 57 89623055 89623073 CTTGATCACTGTCAAGGTC 57 NA Mus musculus 50 Chchd1 ENSMUSG00000063787 ENSMUST00000071215 2 1 1 143 14 21522417 21522527 GAGAGGCAACCTGTATCAC 59 21523346 21523364 TTGATCTCATCTTCCTGGC 59 NA DesignNoJunction Mus musculus 50 Zar1 ENSMUSG00000063935 ENSMUST00000073528 3 1 1 81 5 72969717 72969736 TACTATCACTGCAAGGACTG 58 72969576 72969674 TGAAGTACACCTTACTGGTG 58 NA Mus musculus 50 mmu-mir-101a ENSMUSG00000065451 ENSMUST00000083517 2 1 1 60 4 101019596 101019614 TATCACAGTGCTGATGCTG 59 101019554 101019573 TGCCATCCTTCAGTTATCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-344-1 ENSMUSG00000065568 ENSMUST00000083634 1 1 1 60 7 69022699 69022717 GCTAGATTCCAGGTACCAG 58 69022657 69022675 GTTCAGGGCTTACAGTCAG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Cacng3 ENSMUSG00000066189 ENSMUST00000084615 2 1 1 169 7 129898092 129905706 AATATCTTCTACGAGCTGTGAG 59 129905836 129911865 GATGATGTTGCTTAGCCCT 59 NA Mus musculus 50 Klk1b5 ENSMUSG00000066512 ENSMUST00000074359 3 1 1 87 7 51475419 51475437 TGTCAAAGCCCACATAGAG 59 51475488 51475877 TGAGTCACCCATACAAGTG 58 NA Mus musculus 50 Zbtb6 ENSMUSG00000066798 ENSMUST00000112932 2 1 2 83 2 37285436 37286339 TTTGCTAGTCGATCGTGAC 59 37285371 37285389 TCTGTAGGACCACATCTCC 59 NA InUTR Mus musculus 50 NP_001074874.1 ENSMUSG00000066820 ENSMUST00000086297 3 1 1 80 7 5442108 5442126 TTACAGGACCCGATATGAC 58 5440347 5442064 TAAGCTGAAGGAAATGTGG 57 NA Mus musculus 50 Zfp563 ENSMUSG00000067424 ENSMUST00000087650,ENSMUST00000114419 3 2 2 80 17 33239537 33241575 GAGAAACCTAAGACGTGGA 58 33241619 33241637 AACTCACTGAAGATTCCGT 58 NA Mus musculus 50 EG628991 ENSMUSG00000067679 ENSMUST00000088198 1 1 1 80 X 75436379 75436399 GGAAAGACTTACTGAGTTAGC 58 75436441 75436793 GGACAGGTATCTTCATGTG 57 NA Nonspecific Mus musculus 50 1200003I07Rik ENSMUSG00000068134 ENSMUST00000089207 3 1 3 144 2 149945677 149962312 TCCGACATGGATATAGTGAC 58 149945356 149945571 AATAGTAGCCTATAGCAGCG 58 NA Mus musculus 50 Shroom4 ENSMUSG00000068270 ENSMUST00000103005,ENSMUST00000089520 1 2 2 83 X 6158074 6160320 AACACTAGTGACGTGAGTG 59 6160367 6160385 TTCCATGCTGCCAATAGAG 59 NA Mus musculus 50 1700019G17Rik ENSMUSG00000068299 ENSMUST00000095757 1 1 1 96 6 85852247 85852266 GTAGATTCTCCCTGGATGTC 58 85852076 85852190 ACTGGTATGATTCAGACTCTC 58 NA InUTR Mus musculus 50 2610019A05Rik ENSMUSG00000069631 ENSMUST00000106871,ENSMUST00000007444 1 2 5 162 11 106045876 106045896 GAGATTTGGAACTGTTTGGAG 59 106034679 106035001 AACCCTTTGCCTATGATGG 59 NA Mus musculus 50 Taar5 ENSMUSG00000069706 ENSMUST00000092659 2 1 1 60 10 23691015 23691034 CTTCCTCTACACAGATGTGG 59 23691057 23691075 ACAAGGCATCTCTTCTAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Taar4 ENSMUSG00000069707 ENSMUST00000092660 1 1 1 60 10 23680755 23680775 CTTTCTACTCATCAGTTGGTC 58 23680797 23680815 TTCTGAGAATACCAAGCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nlrp1a ENSMUSG00000069830 ENSMUST00000108519,ENSMUST00000108518,ENSMUST00000048514 1 3 3 83 11 70921170 70921188 ACTGAAGATGAGTTCTGGG 58 70919712 70921123 TAACTGAACTCGGTACAGG 58 NA Mus musculus 50 Eif3g ENSMUSG00000070319 ENSMUST00000004206 1 1 1 83 9 20700658 20702162 GCAAGGAGGAAGAATTGGA 59 20700593 20700611 ATCACTGACTGTGGTAGTG 58 NA Mus musculus 50 Capza1 ENSMUSG00000070372 ENSMUST00000094028 2 1 1 62 3 104643774 104643792 ACATGGATCAGTTCACACC 59 104642891 104643749 GCTCTGTAATTAAGACCTGG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Rnf121 ENSMUSG00000070426 ENSMUST00000106954 1 1 3 213 7 109220665 109220683 GAGGAGAGTTCAAGCTGAC 59 109183967 109188075 GGTCACCATATTGTAAGAACG 58 NA DesignRelaxed Mus musculus 50 Chchd2 ENSMUSG00000070493 ENSMUST00000094280 2 1 1 84 5 130358447 130359819 GACATCACTTACCAGGAGC 59 130358381 130358401 GAAACTGCTTGATCTCTAGAG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000071033 ENSMUSG00000071033 ENSMUST00000095183 1 1 1 60 17 91488288 91488306 CCAGTCCTATGGGATAGCT 59 91488330 91488348 TTGCCTCCAAAGTGTATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rom1 ENSMUSG00000071648 ENSMUST00000096242 1 1 1 131 19 9002369 9002480 CTTATTGCTGCAGATTCTAGTG 59 9002259 9002277 AGTATGTCTTTCAGCCCAC 59 NA Mus musculus 50 Zbtb3 ENSMUSG00000071661 ENSMUST00000088094 2 1 1 60 19 8877856 8877874 TTGTAAGCAACGATTGCAG 59 8877896 8877916 CTCTTCCTTCTTGGTACTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000072619 ENSMUSG00000072619 ENSMUST00000100714 2 1 1 60 15 36621686 36621706 TGACATTATTAGCCTACTCCC 58 36621728 36621746 CAGCAGGACTGTAAAGGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000072956 ENSMUSG00000072956 ENSMUST00000101229 3 1 1 91 6 84370451 84370469 AGCTTCGTTCTGAAGAGTG 59 84363241 84370397 TGGACTGTAACTCTTGATGC 59 NA InUTR Mus musculus 50 EG331493 ENSMUSG00000073010 ENSMUST00000101296 3 1 2 83 X 103904163 103904424 GAGATTAAAGGAATCCTGCC 58 103904469 103904488 ATTTGAACATCAGGTACCTG 57 NA InUTR Mus musculus 50 ENSMUSG00000073058 ENSMUSG00000073058 ENSMUST00000031308 1 1 1 60 5 32433753 32433771 AAATTTGTCAAGGAGCCAC 58 32433711 32433729 GACCTTGTCCTTTGAACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 6330545A04Rik ENSMUSG00000073733 ENSMUST00000105793,ENSMUST00000097813 3 2 2 84 4 140774522 140774540 CTTCCTGGACAGTTGACTC 59 140774586 140775768 GCATGTACTGATCAAACTTGG 59 NA Mus musculus 50 NM_001011757.1 ENSMUSG00000073919 ENSMUST00000098167 2 1 1 60 7 111852757 111852775 TTTGATTCTTCCGTCTGTG 57 111852798 111852817 ACTTAAGGTTTGAGATGCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Trim68 ENSMUSG00000073968 ENSMUST00000082175 1 1 1 80 7 109830261 109832571 GGAATATAAGTGGAAACTCCAG 58 109830202 109830220 TCACTGACTTCCAGTTTCC 59 NA Mus musculus 50 4632427E13Rik ENSMUSG00000074024 ENSMUST00000098305 2 1 1 60 7 99889667 99889687 GAGAAACCCTTAGACTTCCTG 59 99889627 99889645 CACACCACAACAAAGACAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG381936 ENSMUSG00000074306 ENSMUST00000098719 1 1 1 60 7 23499162 23499181 ATGTCATCATTGAACTGCTG 58 23499121 23499139 ATGATTTGGTGGATGGTGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 EG433632 ENSMUSG00000074388 ENSMUST00000098828 2 1 1 60 3 97770451 97770470 CTCGATAGTTAAGCTTCAGG 57 97770493 97770511 TTCAGAAGCTCTGAAAGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1109 ENSMUSG00000075161 ENSMUST00000099863 3 1 1 60 2 86932680 86932701 GTTGAATCCTCTGATTTACAGC 59 86932641 86932659 CAACTTCTTTGCTGCTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1066 ENSMUSG00000075181 ENSMUST00000099885 1 1 1 60 2 86295718 86295736 ACTGAGGGTAAATGGAAGG 58 86295676 86295694 AGACGATGACAACTGTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075393 ENSMUSG00000075393 ENSMUST00000100163 2 1 1 60 15 102932848 102932867 TTCTATCCTTCCTTTCAGCT 58 102932889 102932908 CAGACTACAGAGTGCTAACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000003947 ENSMUSG00000075410 ENSMUST00000106381,ENSMUST00000100197 1 2 3 92 11 116521069 116521087 ATCTAGGAAGATGGTGTGG 58 116529347 116529365 CAAATCCCTCTGAGGATGG 59 NA DesignNoJunction Mus musculus 50 D2Bwg1335e ENSMUSG00000075467 ENSMUST00000028295 1 1 1 121 2 26206944 26206962 AAAGTTGGCCTATCACCAG 59 26206065 26206862 TCTCTTCAATATTCCTCTTCCC 59 NA Mus musculus 50 ENSMUSG00000075583 ENSMUSG00000075583 ENSMUST00000100512 3 1 1 76 15 76098667 76098685 TACCAGCTTCTTCAGTTCC 58 76097924 76098627 AGAGTCAAAGTTACGAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sepx1 ENSMUSG00000075705 ENSMUST00000115262,ENSMUST00000101800 1 2 2 89 17 24876585 24877035 CTTTAAAGGTGTCCTGTGG 57 24877087 24877106 TTCAGAATCTTGATTGTCCC 57 NA Mus musculus 50 IGKV2-137 ENSMUSG00000076501 ENSMUST00000103302 2 1 1 60 6 67505955 67505975 GAGAGTCAGTATCCATCTCCT 59 67505996 67506015 GTGTTGCCATTACTATGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV19-93 ENSMUSG00000076530 ENSMUST00000103331 3 1 1 62 6 68686533 68686551 CTCACTGTCTGCATCTCTG 59 68686489 68686507 TTAATGTCTTGGCTTGCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV6-29 ENSMUSG00000076578 ENSMUST00000103379 1 1 1 60 6 70088751 70089045 TACTGCTCTGGTTATATGGTG 59 70088711 70088729 ATGGATTTGGGAGATTGGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 IGKV8-16 ENSMUSG00000076584 ENSMUST00000103385 2 1 1 60 6 70190685 70190703 AAATTGTGCTGACTGTGTC 58 70190643 70190661 TTCTGATTGGATTTGCAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV6-14 ENSMUSG00000076593 ENSMUST00000103394 1 1 1 294 6 70385230 70385426 GTCTGGTGTTGATGGAGAC 59 70384954 70384972 ATTCCAATGTTGCAGACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV2-7 ENSMUSG00000076647 ENSMUST00000103456 2 1 1 60 12 115045705 115045724 TATGGTGTACATTGGTTTCG 57 115045664 115045683 ATATTCCTCCCAACCATTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRGC4 ENSMUSG00000076757 ENSMUST00000103566 2 1 1 80 13 19436685 19436703 GTTGCATTGTCAAACACGA 59 19436745 19441414 GTTGTGAAAGCTTACCTATGG 58 NA Mus musculus 50 TRAV7D-4 ENSMUSG00000076799 ENSMUST00000103609 2 1 2 190 14 53711062 53711269 GTTAAACTGGGTGAAGAGC 58 53711422 53711441 CTTTCTTGTCACCATCAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000060580 ENSMUSG00000078105 ENSMUST00000104905 3 1 1 149 10 126535571 126535589 CTCCTCTTCCATAAGACCC 58 126535702 126535720 GCATCTTCTACCCAACTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 F8a ENSMUSG00000078317 ENSMUST00000105111 3 1 1 173 X 70474760 70474778 TTCTGCAGGAAACCATCTC 59 70474914 70474933 AAGCCAAATTAACATGGCAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 A2AGW6_MOUSE ENSMUSG00000078513 ENSMUST00000105771,ENSMUST00000105772 2 2 2 132 4 143245776 143246317 AAAGGTTCACTCCAGTAGG 58 143245662 143245681 ATTAGGATGCTTCTGTTCCA 58 NA Mus musculus 50 NP_001078989.1 ENSMUSG00000078625 ENSMUST00000106914,ENSMUST00000106915 2 2 2 80 4 101661517 101661536 CTCAGCAGAGACTAAGAGTG 59 101661577 101662573 ACATAGTACTCCTTCACACCT 59 NA Mus musculus 50 Il11ra2 ENSMUSG00000078735 ENSMUST00000108006 1 1 1 80 4 42347543 42347561 AGTAGTAGCTCAGGAGGAC 59 42347605 42347720 GGATCCCTGTGATCAAGTG 59 NA Nonspecific Mus musculus 50 NM_001101804.1 ENSMUSG00000078863 ENSMUST00000108939,ENSMUST00000108940,ENSMUST00000108937 1 3 3 93 2 177569229 177569248 CCTATAGGAATCTCACAGCT 57 177567793 177568965 CTTTCATGCCTTCCATGAC 58 NA Nonspecific Mus musculus 50 Etohi1 ENSMUSG00000078866 ENSMUST00000108952,ENSMUST00000108949 1 2 3 144 2 177258109 177258334 CAGCTATAGGTTACAGTTGGG 59 177259587 177259605 TGACTCTGACATGCAAAGG 59 NA Mus musculus 50 Gsdmc1 ENSMUSG00000079025 ENSMUST00000110125 1 1 1 80 15 63611594 63611614 CTTTCCAATGAGATTTGTGGG 59 63611343 63611552 TCATTTATCCACGAGCCTG 59 NA Mus musculus 50 Ssxb1 ENSMUSG00000079705 ENSMUST00000037297 2 1 1 79 X 7993059 7993077 GAAACAGTGAGTTCCTGTG 58 7993120 7993593 ATATCCTGGAATGCCTTGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 9030025P20Rik ENSMUSG00000079709 ENSMUST00000097395,ENSMUST00000087433 2 2 2 60 17 15117317 15117337 GAAATTCAGTATTCGCCTTGG 59 15117356 15118555 GTATCTCAAGAAACAACTCTGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 NP_001106850.1 ENSMUSG00000079887 ENSMUST00000116003 2 1 1 60 7 105647997 105648015 GGCATCCTTAGAGGTACTG 58 105648038 105648057 CAAGTCCACTCTCAAGACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-1194 ENSMUSG00000080383 ENSMUST00000116733 1 1 1 60 X 53323874 53323892 GAAGAAGGGAGTCTAGCTC 58 53323916 53323934 AGCAGTTACTCAGTCTCAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Cav2 ENSMUSG00000000058 ENSMUST00000000058 2 1 2 95 6 17232046 17232064 GTATCCTGTTTGCTACCCT 58 17236937 17236955 ATATTGTCTGCACGGAAGG 59 NA DesignNoJunction Mus musculus 50 Tcfe3 ENSMUSG00000000134 ENSMUST00000077680,ENSMUST00000079542 2 2 7 133 X 7340183 7342647 TCAGCCTGAATTCTTTGCT 59 7342744 7343696 CAGTGATATTGGGAGGCTG 59 NA Mus musculus 50 Dgke ENSMUSG00000000276 ENSMUST00000107894,ENSMUST00000000285 1 2 2 80 11 88913788 88913807 TCGTAGTGGAACTAACATGG 59 88912113 88913746 GTTACATCAAACACCTGGAC 58 NA Mus musculus 50 Mx1 ENSMUSG00000000386 ENSMUST00000023655 3 1 2 87 16 97673149 97673218 CAGTCTATACAGAATGGTCCA 58 97673082 97673100 CTTAGCAGTACAGCAGAGG 59 NA Mus musculus 50 1300007F04Rik ENSMUSG00000000686 ENSMUST00000093352 1 1 3 73 11 77332292 77332310 TTCTTCCAATCTGGAGGAG 58 77351744 77351762 AGCCAGAGAAATTGAAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Usp32 ENSMUSG00000000804 ENSMUST00000108075 1 1 2 142 11 84917512 84953215 GAGTTACAGATGTTGAGCTG 58 84897385 84917407 ACAGTAAATCACCTCAGCA 58 NA Mus musculus 50 Fmr1 ENSMUSG00000000838 ENSMUST00000088546,ENSMUST00000114651,ENSMUST00000101518,ENSMUST00000114655,ENSMUST00000114653 1 5 8 102 X 65958466 65958484 GTTGGACCTAACTCCTCTG 58 65958550 65959048 AAACCACTAACACCCTCTG 59 NA Mus musculus 50 Uba1 ENSMUSG00000001924 ENSMUST00000089217,ENSMUST00000001989 1 2 2 80 X 20247932 20247952 CTCATTCTCAGAAGTACAGGG 59 20247994 20248494 AAGGTATAAGGACCCAGCA 59 NA Mus musculus 50 Tmem143 ENSMUSG00000002781 ENSMUST00000069772,ENSMUST00000107716 3 2 3 116 7 53163501 53163520 ATCTACATACAGTTCTGGGC 58 53163598 53164701 GAAGTATCTCCTCTCCACAG 58 NA Mus musculus 50 Relb ENSMUSG00000002983 ENSMUST00000098754 1 1 4 80 7 20206502 20213278 ACCACAGATGACTTAGGAG 57 20205162 20205183 CGTTCTCCTTAATGTATTCGTC 58 NA Mus musculus 50 Hdac9 ENSMUSG00000004698 ENSMUST00000110819,ENSMUST00000110818,ENSMUST00000073838 3 3 4 80 12 35122054 35122072 TAGCAGAGTTTCAGAAGCA 58 35118078 35122011 CTAGAAGTTCCTTGATGTGC 58 NA Mus musculus 50 Pou1f1 ENSMUSG00000004842 ENSMUST00000004964,ENSMUST00000116588 3 2 2 100 16 65533279 65534113 ACAACCATCAGTGTAGCTG 59 65534177 65534195 TTCAGTTCTTCAGCCATCC 59 NA Mus musculus 50 Cugbp1 ENSMUSG00000005506 ENSMUST00000005643,ENSMUST00000068747,ENSMUST00000111452,ENSMUST00000111455,ENSMUST00000111449 3 5 6 126 2 90844908 90844926 AGAACAGAAGAGAATGGCC 59 90845016 90846791 GAGCTGCAAATAAAGTGCT 58 NA Nonspecific Mus musculus 50 4930432K21Rik ENSMUSG00000008129 ENSMUST00000093375,ENSMUST00000008273 1 2 2 103 8 86694257 86694275 TTTCCTTCAGGGAGTATGC 58 86694342 86695725 ACATGGGATCTGGATTGAG 58 NA Mus musculus 50 Pou2f2 ENSMUSG00000008496 ENSMUST00000108416 2 1 8 88 7 25906043 25906061 ACCCGACATTAACCATCAG 59 25885250 25905865 GTTGCTGTATGTCCTTGGT 59 NA Mus musculus 50 Pou2f2 ENSMUSG00000008496 ENSMUST00000098679,ENSMUST00000108417 3 2 8 104 7 25905913 25906058 CGACATTAACCATCAGAACC 58 25901208 25901226 AATGTTAAGTGGAGGCCAG 59 NA Mus musculus 50 Nf2 ENSMUSG00000009073 ENSMUST00000109910,ENSMUST00000056290,ENSMUST00000053079,ENSMUST00000093374,ENSMUST00000109908 2 5 6 92 11 4699928 4699947 ATCTATGACCCTGAGAACAG 58 4694912 4699874 AATAGTAAACTCCTTGTCGC 57 NA Mus musculus 50 Trpm2 ENSMUSG00000009292 ENSMUST00000105401 1 1 3 135 10 77394988 77395006 CTCCTACTTTGCCTTCCTC 59 77393391 77394889 ATAGAATAGCTGCCGAGTC 58 NA Mus musculus 50 Tex11 ENSMUSG00000009670 ENSMUST00000113718,ENSMUST00000009814 3 2 3 81 X 98075365 98075383 CGTGTTTACTTGTAGCAGC 59 98071934 98075323 CTTAGTAACATGTTCTGCTCAC 59 NA Mus musculus 50 Nxf2 ENSMUSG00000009941 ENSMUST00000113189,ENSMUST00000113187 2 2 3 117 X 131484398 131484897 CAGCGATTCAAGAATTTGCA 59 131484300 131484318 CAAAGGCTTGAATGACGTG 59 NA Mus musculus 50 Hps5 ENSMUSG00000014418 ENSMUST00000051883 3 1 5 125 7 54030213 54030231 ATTTCGTTCTCCATCTCCC 59 54028534 54028580 TTCATGTGCTCTTTCAGCT 59 NA Mus musculus 50 Nat9 ENSMUSG00000015542 ENSMUST00000103041,ENSMUST00000103039,ENSMUST00000103038,ENSMUST00000103040 2 4 4 160 11 115045933 115046331 AGATGAAGACAAGTGCACC 59 115044993 115045809 TAGGCTCTGCAATCATGAC 59 NA Mus musculus 50 Col20a1 ENSMUSG00000016356 ENSMUST00000108856,ENSMUST00000108855,ENSMUST00000080705,ENSMUST00000076420,ENSMUST00000108854,ENSMUST00000108852,ENSMUST00000094213 3 7 7 98 2 180735739 180735930 AGAAATCGATCTCTGTACCA 57 180735991 180736009 CTCTGTAGACAGCTGAGAC 58 NA Mus musculus 50 Crry ENSMUSG00000016481 ENSMUST00000075451,ENSMUST00000027918 2 2 2 91 1 196940912 196940931 GGGTATACTCTAGAAGGCAG 58 196938582 196940858 CTGATTGAGCGAGATACAC 57 NA Mus musculus 50 Rpl19 ENSMUSG00000017404 ENSMUST00000092425,ENSMUST00000017548 3 2 2 80 11 97889770 97890715 CATATGGGCATAGGGAAGAG 59 97890757 97890776 GATCCTCATCCTTCTCATCC 59 NA Nonspecific Mus musculus 50 Crlf3 ENSMUSG00000017561 ENSMUST00000103233 3 1 2 107 11 79870031 79870051 AGTCGAAGAAATATAGCCCTC 59 79861230 79869962 AAGACTGCACCTGAATGTC 59 NA Mus musculus 50 Dusp14 ENSMUSG00000018648 ENSMUST00000018792,ENSMUST00000100705,ENSMUST00000108101 1 3 3 190 11 83862806 83864345 AATCCTTAGCACGAAGGAG 59 83862634 83862652 CAATGCCTCCTATGTCTCC 59 NA InUTR Mus musculus 50 Atp6ap1 ENSMUSG00000019087 ENSMUST00000114171 1 1 3 80 X 71548910 71549075 TCTTCATAACTTCCAGAATCCC 59 71549115 71549134 TAGGAGACACATTGACATGG 59 NA Mus musculus 50 2410017P07Rik ENSMUSG00000019813 ENSMUST00000105504 3 1 3 133 10 41450827 41450845 AAGAGTGTCTGAGACTGAC 58 41448506 41449141 AAATCCAGTTTGAAGCTCAC 58 NA Mus musculus 50 Myb ENSMUSG00000019982 ENSMUST00000020158 1 1 2 146 10 20862881 20865992 TTTCTTGAACACTTCCAGC 58 20861878 20862771 GCTGGAGTTCTAAAGATGG 57 NA Mus musculus 50 Rufy2 ENSMUSG00000020070 ENSMUST00000020264 2 1 3 83 10 62463013 62463031 CATGAAGCATGAGATGGAG 57 62463078 62463100 CTGTTGCCGAATATGAGAG 57 NA Mus musculus 50 Srgap1 ENSMUSG00000020121 ENSMUST00000020322 1 1 2 82 10 121265814 121268954 TATATGACTACAAGCCGGG 58 121262716 121262734 CTTTCCACAATGAGAGGGA 58 NA Mus musculus 50 Ccdc139 ENSMUSG00000020280 ENSMUST00000020520,ENSMUST00000109525,ENSMUST00000058163 3 3 4 80 11 23617605 23618581 AACATTAGGAAATGGAAGGC 58 23618623 23618642 TCCTTCATTTCTTGTGAGGT 58 NA Mus musculus 50 Hcn2 ENSMUSG00000020331 ENSMUST00000099513,ENSMUST00000020581 1 2 2 82 10 79191845 79193598 TACCAGGAGAAGTACAAGC 58 79193644 79193662 TAATCGTGGATCTTCTGGC 59 NA Mus musculus 50 Mapk9 ENSMUSG00000020366 ENSMUST00000109179,ENSMUST00000102778,ENSMUST00000043321 2 3 5 82 11 49686331 49686350 GACTCCCTATGTGGTAACTC 58 49686395 49687349 ACCAGATGTCCACATTCTC 58 NA Mus musculus 50 Pecam1 ENSMUSG00000020717 ENSMUST00000106796,ENSMUST00000080853,ENSMUST00000103069,ENSMUST00000068021,ENSMUST00000106795 1 5 5 81 11 106545640 106546283 CAGTCAGAGTCTTCCTTGC 59 106545577 106545596 ACTATTAAGGTGGCGATGAC 59 NA Mus musculus 50 Ccdc46 ENSMUSG00000020728 ENSMUST00000061287,ENSMUST00000106724,ENSMUST00000100297,ENSMUST00000106718 2 4 8 87 11 108452418 108467537 AACAGCAGATAGTAGAGCT 57 108467588 108467606 ACTAGGCTATCCTTCTCTG 57 NA Mus musculus 50 Mfsd11 ENSMUSG00000020818 ENSMUST00000106365,ENSMUST00000021173,ENSMUST00000106363 3 3 3 86 11 116734685 116735104 TTTGTTCAGTCAATCTGCG 58 116735153 116735172 AAATATCACCATGACCAGGA 58 NA Mus musculus 50 Spag9 ENSMUSG00000020859 ENSMUST00000100565 3 1 8 95 11 93932930 93951989 TCTCTTTGAAGAGCTCAGC 59 93953080 93953098 GAGGCTAAACTAGCCTCAG 59 NA Mus musculus 50 Gstz1 ENSMUSG00000021033 ENSMUST00000110166 2 1 2 140 12 88498607 88498857 CAAGCCTATCCTCTACTCC 58 88500093 88500606 TGAAATTCCTCAGTGAACTG 57 NA Mus musculus 50 Esr2 ENSMUSG00000021055 ENSMUST00000110421,ENSMUST00000101291,ENSMUST00000076634,ENSMUST00000110419 3 4 6 85 12 77224306 77234807 CCTCAACTCCAGTATGTACC 59 77224240 77224258 TCACTGCGTTCAATAGGTG 59 NA Mus musculus 50 Pygl ENSMUSG00000021069 ENSMUST00000071250 3 1 2 116 12 71323901 71328333 CCCAAGAGGGTGTATTACC 59 71320646 71323822 CAATCCAAGCTGGTAAATGG 59 NA Mus musculus 50 Entpd5 ENSMUSG00000021236 ENSMUST00000072061,ENSMUST00000110272,ENSMUST00000021662 1 3 3 80 12 85727980 85728000 GGAGATCTTCAAGAATTCACC 58 85727714 85727939 GCTAGTATGCCTTCATAGGA 58 NA Mus musculus 50 Klc1 ENSMUSG00000021288 ENSMUST00000069328,ENSMUST00000084942,ENSMUST00000021717 1 3 4 80 12 113014148 113014166 CTGATTCTTCCAAAGAGCC 58 113014210 113015043 CACTACTGTGCTGTATTCC 57 NA Mus musculus 50 A530054K11Rik ENSMUSG00000021510 ENSMUST00000012314 1 1 1 61 13 67724979 67724997 GAACTACAGCAACCTTGTG 58 67724465 67724483 GACATGTGATCAGATGTGG 57 NA DesignNoJunction Mus musculus 50 Ankra2 ENSMUSG00000021661 ENSMUST00000022164 3 1 2 172 13 99036485 99037286 AAGCTGAGTGCAATATCCA 58 99037422 99038395 AGCAGACAGAGAATTTGCT 59 NA Mus musculus 50 Ktn1 ENSMUSG00000021843 ENSMUST00000089901 1 1 6 129 14 48350075 48350093 AAGGTAGCTGATGATTTGC 57 48352988 48355784 TTACTTCACTCATTTCTGGG 57 NA Mus musculus 50 BC036313 ENSMUSG00000022211 ENSMUST00000076236 1 1 2 144 14 56120422 56120676 ACCAACATCGACACTATGG 59 56121115 56121133 CAAGTCCTGAGAACCATCC 59 NA Mus musculus 50 5730410E15Rik ENSMUSG00000022340 ENSMUST00000090057,ENSMUST00000110269,ENSMUST00000110267 2 3 4 81 15 44509127 44509145 CCTTCTTCTCCAAGTAGCA 58 44507045 44509083 TGTATCTTCCAGACCTTCTC 58 NA Mus musculus 50 Depdc6 ENSMUSG00000022419 ENSMUST00000096433,ENSMUST00000023056 2 2 3 81 15 55049759 55049777 ACGAGGAAGTAAACCATGC 59 55049821 55083573 AAACTGACAGACCTTCATCC 59 NA Mus musculus 50 Osbpl11 ENSMUSG00000022807 ENSMUST00000115064,ENSMUST00000039733 2 2 2 82 16 33214561 33214580 GCTTAAATGACTGCTTTCAC 57 33214625 33216813 TTCAATTGTTGTCCCTGAG 57 NA Mus musculus 50 Tekt4 ENSMUSG00000024175 ENSMUST00000025002 2 1 1 75 17 25611171 25611189 AGTTCTATCCGCATTCCAG 59 25611608 25611626 TTGTCGTGATTGAACTTGG 58 NA DesignNoJunction Mus musculus 50 Ms4a7 ENSMUSG00000024672 ENSMUST00000067532,ENSMUST00000056035,ENSMUST00000025574 3 3 3 80 19 11402534 11407708 ACAGTTCTTGGAACCATCC 59 11402472 11402490 GAAGTAGGAAGCTGACACC 59 NA Mus musculus 50 AI747699 ENSMUSG00000024766 ENSMUST00000025694,ENSMUST00000112508 2 2 3 83 19 33634141 33653865 CAACGACTATCAAGCTCCT 59 33634076 33634094 TATTGCAAACACATGCACC 59 NA Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000041717,ENSMUST00000111662,ENSMUST00000086848,ENSMUST00000061496,ENSMUST00000078917,ENSMUST00000111659,ENSMUST00000111651,ENSMUST00000111649,ENSMUST00000111653,ENSMUST00000111656 3 10 15 124 19 55817577 55817595 GATGGAGGGCTCTTTAAGG 59 55817681 55892267 TTCATCTGAAGATAGGTTCGG 59 NA Mus musculus 50 Dntt ENSMUSG00000025014 ENSMUST00000051806 1 1 2 115 19 41130292 41130310 AAGATGATGCTGGACAACC 59 41133112 41133569 TCAAGAAACACCCTCAAGG 59 NA Mus musculus 50 Msr1 ENSMUSG00000025044 ENSMUST00000026021 3 1 2 108 8 40667212 40674654 CTTTGGACAAGGTACTGGT 59 40667122 40667140 TGAACAGCTTAGTACTCCC 58 NA Mus musculus 50 Stra13 ENSMUSG00000025144 ENSMUST00000055424,ENSMUST00000106154,ENSMUST00000106155 1 3 4 120 11 120573067 120573172 ATTGCAAGACCAAAGTCAG 58 120572741 120572759 ACAACATCCAGGTCTTCTG 59 NA Mus musculus 50 Alas2 ENSMUSG00000025270 ENSMUST00000066337 3 1 2 99 X 146986800 146986820 CTATTTAGTATTGGACGCTGC 58 146986881 146987513 AAGATGGAGAGTCTCCTCC 59 NA Mus musculus 50 Pias2 ENSMUSG00000025423 ENSMUST00000114777,ENSMUST00000080968 2 2 3 145 18 77383792 77383810 TTGATCCTGCTGCTATTCC 59 77388835 77391371 AAACATAGGAGGACAGTACTG 58 NA Mus musculus 50 Tk1 ENSMUSG00000025574 ENSMUST00000106330,ENSMUST00000026661,ENSMUST00000106329 2 3 3 263 11 117678443 117678461 CAAGACAGTAATTGTGGCA 57 117677356 117677374 TTCTTGTTGTCTGAGCCAG 59 NA DesignNoJunction Mus musculus 50 Arhgef9 ENSMUSG00000025656 ENSMUST00000113876,ENSMUST00000113885,ENSMUST00000113883,ENSMUST00000113882,ENSMUST00000113878,ENSMUST00000113881,ENSMUST00000113880,ENSMUST00000113873 1 8 10 117 X 92247484 92250291 AAACAGAAAGGTGTCAACTC 58 92247386 92247404 CAAACACTTGAGACTGAGC 58 NA Nonspecific Mus musculus 50 Pip5k3 ENSMUSG00000025949 ENSMUST00000114042,ENSMUST00000081154 2 2 4 84 1 65238832 65238850 CTTAATGAGGAGCTCCACC 59 65239136 65242244 CTTTCCTTCTGGAGTCTGTG 59 NA Mus musculus 50 Inpp5d ENSMUSG00000026288 ENSMUST00000072999 3 1 2 128 1 89611658 89611859 AAACTACATTGCCAACCGA 59 89614326 89614345 AGTGGGTTCTCAAACATCTC 59 NA Mus musculus 50 Mki67ip ENSMUSG00000026377 ENSMUST00000027626,ENSMUST00000112688 2 2 2 108 1 120226045 120226063 GCAGATGTTGAAGATGGAG 58 120226135 120227194 CTTAGGTAGGACCAGTGAG 58 NA Mus musculus 50 Fmo9 ENSMUSG00000026560 ENSMUST00000027843,ENSMUST00000111405 1 2 2 80 1 168594780 168594798 CTGAGCAAATTACCCTCAG 57 168593773 168594737 CTTTACATACCGTTTCTCCA 57 NA Mus musculus 50 Xcl1 ENSMUSG00000026573 ENSMUST00000027860 3 1 1 61 1 166863044 166863063 ACCTATATCATCTGGGAGGG 59 166862061 166862080 TTTAGTCCTCGTTTGGTGAC 59 NA DesignNoJunction Mus musculus 50 Prrx1 ENSMUSG00000026586 ENSMUST00000027878,ENSMUST00000075805 3 2 2 65 1 165187918 165187936 CAGACCAACCGATTATCTC 57 165178507 165178525 GCAGAATAAGTAGCCATGG 57 NA DesignNoJunction Mus musculus 50 Vamp4 ENSMUSG00000026696 ENSMUST00000111573,ENSMUST00000086068,ENSMUST00000050010 1 3 3 152 1 164511960 164511978 TCTGGACCAAGATTTGGAC 59 164518417 164519606 CGATAAGCTTTCTGATTTGTCC 59 NA Mus musculus 50 Acbd5 ENSMUSG00000026781 ENSMUST00000028121,ENSMUST00000114526 2 2 3 141 2 22950030 22955097 AGGGAGAGGGAATAGAATACC 59 22955200 22955218 TCTAATGAGCACAAGAGCG 59 NA Mus musculus 50 Odf2 ENSMUSG00000026790 ENSMUST00000113766 3 1 13 92 2 29747787 29748566 AACTGTTACGGTAGGAACC 58 29748622 29748640 TTTATGTGGACGTGGACAG 59 NA Mus musculus 50 Acvr1 ENSMUSG00000026836 ENSMUST00000112599,ENSMUST00000090935,ENSMUST00000112601,ENSMUST00000056376 3 4 5 80 2 58311344 58311363 TAAGAGGGTCGATATTTGGG 58 58300843 58311303 TCTTCCACTATACCATTGCTC 59 NA Mus musculus 50 Acvr1 ENSMUSG00000026836 ENSMUST00000112599,ENSMUST00000090935,ENSMUST00000112601,ENSMUST00000056376 3 4 5 80 2 58311344 58311363 TAAGAGGGTCGATATTTGGG 58 58300843 58311303 TCTTCCACTATACCATTGCTC 59 NA Mus musculus 50 Ssfa2 ENSMUSG00000027007 ENSMUST00000028393,ENSMUST00000111788,ENSMUST00000111785,ENSMUST00000111784 3 4 4 80 2 79482279 79482298 CAGTTTCATCAGAAAGGGAG 58 79482341 79483573 CAGTTCTGAGACACTTGAC 57 NA Mus musculus 50 Mfap1b ENSMUSG00000027242 ENSMUST00000110602,ENSMUST00000028676,ENSMUST00000110603 2 3 4 98 2 121357168 121359852 GTTTGAGGAGGTGTACAGG 59 121359914 121359932 AAATGTCCATCCCAGTGTC 59 NA Mus musculus 50 Snap23 ENSMUSG00000027287 ENSMUST00000116437,ENSMUST00000090016 2 2 4 81 2 120412000 120416406 GCCCTTGTAATAGATTCTCAG 57 120420552 120420572 GCCTTATAGTTCTTTCCAGAC 58 NA Mus musculus 50 Dnmt3b ENSMUSG00000027478 ENSMUST00000072997,ENSMUST00000109772,ENSMUST00000056495,ENSMUST00000109774,ENSMUST00000088976,ENSMUST00000109771 1 6 10 149 2 153496176 153496597 GCAACCAGTGGTTAATAAGTC 59 153498014 153498033 TAGCTATTTGTCTTGAGGCG 59 NA Mus musculus 50 Snta1 ENSMUSG00000027488 ENSMUST00000109728,ENSMUST00000028991 3 2 2 88 2 154229518 154229536 GGTGAAGATTTGTCCTCTG 57 154209711 154229467 ATGTACTTAACCTCCAACAC 57 NA Mus musculus 50 Tpd52 ENSMUSG00000027506 ENSMUST00000091355 2 1 4 99 3 8944679 8944697 TGAAACTCTATCGCAAGCT 58 8936468 8944616 AATGGAGCGGATATTCACG 59 NA Mus musculus 50 Nkain4 ENSMUSG00000027574 ENSMUST00000108873,ENSMUST00000103053,ENSMUST00000108869,ENSMUST00000029091 2 4 5 92 2 180678509 180689276 GTATGTTGTATGGGCAGCT 59 180677922 180678454 AGTTCACTGTCCTTTGAGAG 59 NA Mus musculus 50 Epb4.1l1 ENSMUSG00000027624 ENSMUST00000103137,ENSMUST00000109577,ENSMUST00000109571,ENSMUST00000029155,ENSMUST00000103136,ENSMUST00000088565,ENSMUST00000103135 2 7 12 89 2 156350946 156350964 CCAAGAGGATGAATCTGGG 59 156351016 156352635 GCTTTCACAGACTCAAACTG 59 NA Mus musculus 50 Tmem77 ENSMUSG00000027900 ENSMUST00000067630 3 1 2 103 3 106373695 106373713 CTTTCCTACCAAATGCAGC 59 106373779 106374538 CAAGTCATCATGCTAAGTGC 59 NA Mus musculus 50 Creb3l4 ENSMUSG00000027938 ENSMUST00000029547,ENSMUST00000107369 1 2 2 80 3 90041834 90041981 CTTCATGGAGTGATTTCCAG 58 90041773 90041791 TTTGGACTTTAGCACTGGA 58 NA Mus musculus 50 Col11a1 ENSMUSG00000027966 ENSMUST00000092155 2 1 5 111 3 113797455 113797476 CGAGTATGACTATGAATATGGG 57 113797547 113798133 ATCCACAATATTTGCCTCTG 57 NA Mus musculus 50 1700025O08Rik ENSMUSG00000028244 ENSMUST00000029906 1 1 1 60 4 22865352 22865372 CATAGTCTCAACCAGAAACAC 58 22865312 22865330 TAAGCCAACATTCGTTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mrto4 ENSMUSG00000028741 ENSMUST00000102503,ENSMUST00000030513 2 2 2 93 4 138905627 138906363 CCTGATAGAAGAGCTTCGG 59 138905552 138905570 GATGTCTTTCAGCTTGCTG 59 NA Mus musculus 50 Srrm1 ENSMUSG00000028809 ENSMUST00000105862 3 1 5 80 4 134880758 134880776 TTAGGAGAGTCTCCAGGAC 59 134880342 134880551 ACACTCTCCTGATGTTTCTC 59 NA Mus musculus 50 Trspap1 ENSMUSG00000028898 ENSMUST00000030730,ENSMUST00000105959 3 2 5 82 4 131877643 131877664 GAGTTCTTTGTCAAAGTCTACC 58 131875478 131877601 AAACCATAGCCCTTAGACAC 59 NA Mus musculus 50 Epb4.1 ENSMUSG00000028906 ENSMUST00000105969 2 1 14 80 4 131513611 131513629 GACAAGCGCTTATCTACAC 58 131511485 131513568 TTTCTTCACTCCATCTCCAG 59 NA Mus musculus 50 Plekhm2 ENSMUSG00000028917 ENSMUST00000030751,ENSMUST00000084203,ENSMUST00000105783 3 3 3 81 4 141197414 141197923 AAGTACTATGTCAGGAACGC 59 141197352 141197370 TAAACTCCAACCCAGACAC 59 NA Mus musculus 50 Park7 ENSMUSG00000028964 ENSMUST00000105675,ENSMUST00000030805,ENSMUST00000105674,ENSMUST00000105676,ENSMUST00000105673,ENSMUST00000105677 2 6 6 99 4 150271571 150275126 ATGAATGGCAGTCACTACAG 59 150271491 150271510 CTAGTGCAAACTCAAAGCTG 59 NA Mus musculus 50 Dffa ENSMUSG00000028974 ENSMUST00000030816,ENSMUST00000103216 2 2 2 105 4 148491698 148491890 ACCAGAAAGAGTCCAAAGC 59 148491958 148491977 GTAAGGATCTGGCTTCTGAG 59 NA Mus musculus 50 Brdt ENSMUSG00000029279 ENSMUST00000031215 3 1 2 86 5 107788420 107788438 AAGGCATCCACACTTAGAG 58 107788488 107788612 GACAACCTTCTTTGCTTGG 59 NA Mus musculus 50 Cit ENSMUSG00000029516 ENSMUST00000112014,ENSMUST00000051704,ENSMUST00000112011,ENSMUST00000112008,ENSMUST00000102560 2 5 6 80 5 116301235 116301253 TCTCTTTGAAGAGTGCAGC 59 116301296 116309219 ATGGTGTCGGAATACTTCTG 59 NA Mus musculus 50 Zfml ENSMUSG00000030016 ENSMUST00000032088 2 1 5 80 6 83929893 83933977 ACATTTGGCAGTTGATGAC 58 83934019 83934039 CCTACAGAAGAGTCTTGAGTC 59 NA Mus musculus 50 Foxp1 ENSMUSG00000030067 ENSMUST00000113326,ENSMUST00000113328,ENSMUST00000113324,ENSMUST00000113322,ENSMUST00000074346,ENSMUST00000113329,ENSMUST00000068823 2 7 10 80 6 98904393 98916033 GTTAGAGCTACAGCTTGCA 59 98904331 98904350 TTGGGTTCTGTAGACTTCAC 59 NA Mus musculus 50 Tmcc1 ENSMUSG00000030126 ENSMUST00000088896,ENSMUST00000032222 3 2 3 81 6 115974951 115992903 GGAAGAGCGGTATAGATGTG 59 115974889 115974910 TAAGTTCAGGATCTCATTCTGG 59 NA Mus musculus 50 Cib1 ENSMUSG00000030538 ENSMUST00000065163 3 1 2 163 7 87373419 87375204 AAGGCTAACCCTTTCAAGG 59 87373157 87373293 TCATCAAAGTCAAAGATGCG 58 NA Mus musculus 50 Sytl2 ENSMUSG00000030616 ENSMUST00000032846,ENSMUST00000107210,ENSMUST00000098310 3 3 4 86 7 97536039 97536058 GAAGAATTAGTGCGTAGTGC 59 97537418 97540879 CACTGTGGAAATTCCTGGT 59 NA Mus musculus 50 Exod1 ENSMUSG00000030929 ENSMUST00000033224 2 1 2 199 7 126930053 126930265 GTCCTTGAACAAGGTTCTC 57 126929872 126929893 CCTTTATACAGGAGGAATTCAC 58 NA Mus musculus 50 Syp ENSMUSG00000031144 ENSMUST00000069520,ENSMUST00000116638,ENSMUST00000116637,ENSMUST00000033484 1 4 4 136 X 7225886 7225904 TTATCAACCCGATTACGGG 59 7226001 7228971 TTCACTGACCAGATTACATCTG 59 NA InUTR Mus musculus 50 Porcn ENSMUSG00000031169 ENSMUST00000077595,ENSMUST00000082320,ENSMUST00000089403,ENSMUST00000089402,ENSMUST00000115602 2 5 5 124 X 7776272 7776369 TATGTGGAACATGTCCTCAG 59 7775186 7775204 AAGTTTAAGGCTCGTACCC 59 NA Mus musculus 50 Atrx ENSMUSG00000031229 ENSMUST00000113573,ENSMUST00000033580,ENSMUST00000087810 2 3 5 120 X 103079734 103079752 GATTGTACAACCAGAGCCA 59 103075344 103079650 ATGAAGTCCATCTTCTCCG 58 NA Mus musculus 50 Sytl4 ENSMUSG00000031255 ENSMUST00000113297 1 1 3 99 X 130482344 130482362 AACACTTTCCTTGGAGAGG 59 130472577 130482282 CCATTACTGATCCCTTTCCA 59 NA Mus musculus 50 Ctps2 ENSMUSG00000031360 ENSMUST00000112303,ENSMUST00000033727,ENSMUST00000112301,ENSMUST00000112300 1 4 7 80 X 159413148 159413166 TTGGGAGGAACAATGAGAC 59 159413208 159434653 GTCACCATAAAGCTTCTTCAG 58 NA Mus musculus 50 Arhgef7 ENSMUSG00000031511 ENSMUST00000110911,ENSMUST00000074856 1 2 7 88 8 11822037 11831498 ACCCTGAACTCAAGTTCAC 59 11831550 11831568 TTGCTCTTGGTTTCTTCGA 59 NA Mus musculus 50 Barx2 ENSMUSG00000032033 ENSMUST00000051296,ENSMUST00000116615 3 2 2 99 9 31654629 31661705 AGAAGATGGTCCTTAAAGGT 57 31654549 31654567 TCTTCAGCTTCAATCTCCT 57 NA Mus musculus 50 Ppp2r1b ENSMUSG00000032058 ENSMUST00000034560 3 1 2 98 9 50687394 50691584 GAAGCTATAAGTGTGGTGG 57 50691645 50691664 GAAGAGATTCTTGTCAACCC 58 NA Mus musculus 50 Trib3 ENSMUSG00000032715 ENSMUST00000040312,ENSMUST00000099213 1 2 2 73 2 152165451 152165469 TCTTCAGCAACTGTGAGAG 59 152164369 152164387 ATCTGATCCAGTCATCACG 58 NA DesignNoJunction Mus musculus 50 Gng11 ENSMUSG00000032766 ENSMUST00000031670 1 1 1 67 6 3954324 3954342 CCTTCACATCGAGGATCTG 59 3954373 3954391 CTTCTTTGCGAAGTTGCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nope ENSMUSG00000032816 ENSMUST00000035499,ENSMUST00000077696 3 2 2 199 9 64982430 64982922 TATGACGCCATAAAGAGCA 58 64983085 64983103 CCTTGAGACAGATCCACAG 59 NA Mus musculus 50 Cst10 ENSMUSG00000033156 ENSMUST00000109938,ENSMUST00000047008 1 2 3 159 2 149231319 149231337 AGCCAATACGACTGATGAG 59 149233125 149235719 TTACAGATGACCCTCTTCTG 58 NA Mus musculus 50 Rbm9 ENSMUSG00000033565 ENSMUST00000089470,ENSMUST00000109780 3 2 5 81 15 76922272 76928379 CCTATCCAGGAATAGTGTTACAG 59 76916557 76916575 TGTGCATATCTGTAGGCTG 59 NA Mus musculus 50 Fa2h ENSMUSG00000033579 ENSMUST00000038475,ENSMUST00000093130,ENSMUST00000109156 1 3 3 96 8 113880045 113880063 TATGATGAGTGGGTTCACC 58 113879396 113879986 GGACACTATACCAGACAGTC 58 NA Mus musculus 50 D930015E06Rik ENSMUSG00000033767 ENSMUST00000047595 1 1 2 81 3 83704325 83705275 CCTGACAGTTTCATTGATTGG 59 83704264 83704284 TGTAATCGTTCAGTTCCAGAG 59 NA Mus musculus 50 Exosc1 ENSMUSG00000034321 ENSMUST00000075280,ENSMUST00000112123 1 2 2 80 19 41999253 41999271 TGCACAGTCCAATTACCTG 59 41998569 41999209 ATCTGAACACCTGACTCAC 58 NA Mus musculus 50 Pkd1l2 ENSMUSG00000034416 ENSMUST00000109093,ENSMUST00000040422,ENSMUST00000098375 1 3 3 80 8 119583415 119583433 CCAAGAGCTGGAGAAAGAG 59 119581425 119583372 TTCTCACAGCTGATTTGAGG 59 NA Mus musculus 50 Hmgb2l1 ENSMUSG00000034518 ENSMUST00000041759 3 1 2 89 8 77523715 77523734 AGTGATTTGTTCTTCTTGGG 58 77523786 77524562 CAAAGTCGAAATGTCTCCA 57 NA Mus musculus 50 Rsrc1 ENSMUSG00000034544 ENSMUST00000065047 3 1 4 139 3 66800503 66984759 GAACCAGAAGGGATTCTGG 59 67094291 67094309 CTCACTCCTTTCTTTGGCT 59 NA Mus musculus 50 Ppp1r1c ENSMUSG00000034683 ENSMUST00000090760 3 1 3 89 2 79596638 79599778 CACAAGAATCGCAGAATGC 59 79648460 79648479 GGTCTTTCAGATGCTTAACG 58 NA Mus musculus 50 Mitf ENSMUSG00000035158 ENSMUST00000113340 2 1 7 113 6 97953898 97953916 CTTGATCGACCTCTACAGC 59 97953992 97960401 CTTCTTCGTTCAACTGTGAG 58 NA Mus musculus 50 Abi3bp ENSMUSG00000035258 ENSMUST00000048471 2 1 4 81 16 56650876 56652260 TGAAACTGCACCTTTAGAG 57 56652304 56652323 GGTTTGTAGTTCCTCTTGAC 58 NA Mus musculus 50 Impg2 ENSMUSG00000035270 ENSMUST00000048736 2 1 3 95 16 56252374 56252393 ATTATATCGCTGAGACGCTG 59 56252451 56258266 GAAGCACTGCATTGATGAG 59 NA Mus musculus 50 Abca17 ENSMUSG00000035435 ENSMUST00000039324 2 1 2 80 17 24472531 24472551 TCTTTCTACATACTGGTGGGA 59 24471228 24472489 ATACTTCACCACAAGTGGC 59 NA Mus musculus 50 L3mbtl ENSMUSG00000035576 ENSMUST00000035751,ENSMUST00000109436 3 2 2 90 2 162786810 162787148 TTCCCAAAGGTTACAAGGA 58 162787202 162787220 CTTACAAACAGGTGCTTGG 58 NA Mus musculus 50 1810020D17Rik ENSMUSG00000035642 ENSMUST00000075718,ENSMUST00000042627 2 2 3 80 7 104713802 104724107 GGGATCACAGATTTCAGCT 59 104713740 104713759 CCTTGCACTTTCATTTGTCC 59 NA InUTR Mus musculus 50 Zdhhc17 ENSMUSG00000035798 ENSMUST00000041723 3 1 2 80 10 110383376 110384369 ATGGTTGTGTCTCTTACTGG 59 110383315 110383336 CGATCTGAGTTATGTATGTCCA 59 NA Mus musculus 50 Ibtk ENSMUSG00000035941 ENSMUST00000039213 3 1 2 82 9 85631123 85631141 GAAGGATTGTCACCTTTGG 58 85628691 85631077 TAGACTTCTGTGGGATCAG 57 NA Mus musculus 50 Gng12 ENSMUSG00000036402 ENSMUST00000043148,ENSMUST00000114228,ENSMUST00000114227,ENSMUST00000114226,ENSMUST00000114225,ENSMUST00000114224,ENSMUST00000114222 3 7 7 125 6 66965821 66967462 CCATCGAAAGAATAAAGGTCTC 58 66967547 66967566 TCTTCTTATCCTTGAACGGG 59 NA Mus musculus 50 March1 ENSMUSG00000036469 ENSMUST00000110258,ENSMUST00000110259,ENSMUST00000098708,ENSMUST00000072482,ENSMUST00000110253 2 5 7 89 8 68980086 68992135 AGGTAACGACAATGGTGTG 59 68992188 68992206 TACATGAAGACGAGACCTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 March1 ENSMUSG00000036469 ENSMUST00000110258,ENSMUST00000110259,ENSMUST00000098708,ENSMUST00000072482,ENSMUST00000110253 3 5 7 91 8 68980086 68992135 AGGTAACGACAATGGTGTG 59 68992188 68992208 CATACATGAAGACGAGACCTC 59 NA Nonspecific Mus musculus 50 Mag ENSMUSG00000036634 ENSMUST00000073818 2 1 2 84 7 31684706 31685664 AGTATGAGAGTGAGAAGCAG 58 31684641 31684659 TAACTGAGGTCCAGTTCTG 58 NA Mus musculus 50 Spryd3 ENSMUSG00000036966 ENSMUST00000044757 2 1 2 119 15 101948559 101948578 GAAATGTCATGTACCTGCAC 59 101948132 101948477 GAGTGAAGAAGACCACCAC 59 NA Mus musculus 50 Tbcel ENSMUSG00000037287 ENSMUST00000066148,ENSMUST00000066179 3 2 2 90 9 42258068 42258086 ATGAAAGAGAAATCGCAGC 58 42252661 42258014 ATCTTACTGACCTCATGCC 58 NA Mus musculus 50 C330043M08Rik ENSMUSG00000038022 ENSMUST00000053094,ENSMUST00000114365 2 2 2 83 6 55210562 55210580 TTGTCTTGTTTCCACCTCC 59 55210625 55212722 TCTTTATCTCCTTAGCCAGTG 58 NA Mus musculus 50 A930037G23Rik ENSMUSG00000038271 ENSMUST00000088276 3 1 2 190 6 125101525 125102632 TATGATCCAGATGTTCCAGG 58 125102785 125103073 AATCATACTCCCTCAGCTG 58 NA Mus musculus 50 Cbfa2t2 ENSMUSG00000038533 ENSMUST00000109725,ENSMUST00000045270,ENSMUST00000109720,ENSMUST00000099178,ENSMUST00000109724,ENSMUST00000109718 3 6 7 240 2 154336319 154341556 ATTCCATTTCTCAAGGCCA 59 154343468 154343488 GTTCAGGAGGAACTGTATCTC 59 NA DesignRelaxed Mus musculus 50 Garnl3 ENSMUSG00000038860 ENSMUST00000113174,ENSMUST00000043162,ENSMUST00000102810,ENSMUST00000049618 3 4 4 88 2 32901034 32901053 GTTTGAGAAAGGACCTAGGG 59 32890290 32896965 TGAAATTCACAGAGCCCTC 59 NA Mus musculus 50 Dcxr ENSMUSG00000039450 ENSMUST00000026144 2 1 2 96 11 120587312 120587412 TACTGTCTACTGTTCCACCA 59 120587149 120587167 GTTTACTGCATTCACACGG 59 NA Mus musculus 50 Nphp4 ENSMUSG00000039577 ENSMUST00000081393,ENSMUST00000056567 2 2 4 118 4 151880638 151881470 TCTTCCAAGAACAGCTCTG 59 151881552 151881570 CTGTTGAACACGTACTCCA 59 NA Mus musculus 50 Ipo8 ENSMUSG00000040029 ENSMUST00000048418 1 1 2 140 6 148759218 148759236 AAGTGTAAGAAGTGGGCTC 59 148755033 148758414 TAGTAGTACCTGTTGAATTCCC 58 NA Mus musculus 50 Stat2 ENSMUSG00000040033 ENSMUST00000105238,ENSMUST00000085708 2 2 2 80 10 127713945 127714188 GGATATTCAGACCTTTCCCA 58 127714231 127714249 AGAATCCTTTGCTCTTCCA 58 NA Mus musculus 50 Cacna2d1 ENSMUSG00000040118 ENSMUST00000039370,ENSMUST00000078272 3 2 3 82 5 15846532 15846551 TTGGTATTGCCAACCTACAG 59 15846595 15848513 AGGGTTTCTGAATATCTGGC 59 NA Mus musculus 50 Gemin8 ENSMUSG00000040621 ENSMUST00000087169 1 1 3 86 X 162616560 162616727 AAGATCACAACCCAGTTCC 59 162618299 162618317 ATACCAAGATGCACTAGCC 59 NA InUTR Mus musculus 50 Agbl2 ENSMUSG00000040812 ENSMUST00000099743,ENSMUST00000111483,ENSMUST00000111482,ENSMUST00000111481 1 4 7 94 2 90653501 90655509 AGAATTCAGAGTAAGAAGCCAG 59 90655564 90655582 TTTGGCTTCACATCTGGAG 59 NA Mus musculus 50 Mfap2 ENSMUSG00000040860 ENSMUST00000097816,ENSMUST00000102491,ENSMUST00000040222 2 3 3 154 4 140578303 140578321 TTTGGAATATAGCCCTCGG 58 140578064 140578185 GGACCTTAAGTTCATCCCG 59 NA Mus musculus 50 Rpl21 ENSMUSG00000041453 ENSMUST00000035983,ENSMUST00000075453,ENSMUST00000099272 2 3 3 80 5 147646075 147646575 TAGACATCAAGGGAATGGG 58 147646619 147646637 CATTGTAGACTCTTCCGGT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Kif14 ENSMUSG00000041498 ENSMUST00000027653,ENSMUST00000047817 1 2 2 80 1 138368142 138369970 AGTCCTATACGATGATGGG 57 138370014 138370032 TGGCTATTTGAGCAAAGAG 57 NA Mus musculus 50 Kif14 ENSMUSG00000041498 ENSMUST00000047817 2 1 2 80 1 138394029 138394048 TCTTGAACAGGAAGTGTACG 59 138394090 138396610 CTATGGTCTTCTAAGGCCTG 59 NA Mus musculus 50 Mbp ENSMUSG00000041607 ENSMUST00000047865,ENSMUST00000091789 1 2 10 119 18 82691507 82691525 CTCAGAGGACAGTGATGTG 59 82723789 82723808 CCTTGCCAGTTATTCTTTGG 59 NA DesignNoJunction Mus musculus 50 Rapgef5 ENSMUSG00000041992 ENSMUST00000109691,ENSMUST00000038264 3 2 2 80 12 118991938 118994443 CTAACCAGTTTGGAAGTGAC 58 118994486 118994504 TGTCGATGACATACAGGTG 59 NA Mus musculus 50 Mum1l1 ENSMUSG00000042515 ENSMUST00000113045,ENSMUST00000113043,ENSMUST00000046931,ENSMUST00000113042,ENSMUST00000113041 1 5 6 80 X 135768322 135768342 CCTGAGGATCAAGATACTTGG 59 135768382 135769055 AGAGAACTCTGGAAGATACCT 59 NA InUTR Mus musculus 50 Smg7 ENSMUSG00000042772 ENSMUST00000043560 2 1 3 168 1 154717909 154725177 ATATTAGGCAGGCAGAAGTC 59 154713832 154715388 GCATGATTCCAGAGATCCT 58 NA Mus musculus 50 Tnp2 ENSMUSG00000043050 ENSMUST00000051297 3 1 1 75 16 10788426 10788444 ACAGGAAGACCTTTGAAGG 59 10788369 10788387 CTCTTAGCTCTGTGAGTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zmym1 ENSMUSG00000043872 ENSMUST00000055013,ENSMUST00000106102 2 2 3 132 4 126727144 126727819 GTCATCATGAGCAACTCAG 58 126727030 126727048 TGTTGTTCTCTACTCCCTC 57 NA Mus musculus 50 Adam6 ENSMUSG00000043945 ENSMUST00000053086,ENSMUST00000109714 1 2 2 60 12 114783154 114783173 GAGATGATGCTGTTAATCCA 57 114783196 114783214 AGACAAATTAGGGCTGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ubr3 ENSMUSG00000044308 ENSMUST00000055758 1 1 3 111 2 69792404 69794025 TCTTTGCTTGACCTCATCC 59 69794100 69794118 AAATGGGAGCCCTAAAGTC 59 NA Mus musculus 50 Mcart6 ENSMUSG00000044348 ENSMUST00000113070,ENSMUST00000113069 3 2 3 199 X 133550833 133550851 GTTTCCACAACGTGTAAGG 58 133518151 133549804 ATGGAAGAAGCTGGTAACC 59 NA InUTR Mus musculus 50 D1Ertd622e ENSMUSG00000044768 ENSMUST00000053033 3 1 2 84 1 99551179 99551199 GACATCATCTGGGATTTAGTC 57 99542877 99542895 CAGGGTACTTCTGGAATCC 59 NA DesignNoJunction, InUTR Mus musculus 50 1700029I15Rik ENSMUSG00000044916 ENSMUST00000054316 1 1 2 232 2 92223163 92223181 TTTACCTCATCTTGGCAGG 59 92223696 92223717 CACATCATAGTAATAGTCAGCC 58 NA DesignNoJunction Mus musculus 50 BC023882 ENSMUSG00000045102 ENSMUST00000101334 1 1 3 97 5 34375458 34375476 AAGGACATTCCCATAGAGC 58 34356987 34375397 ATGGATGTCACATAGCCAG 59 NA Mus musculus 50 EG546723 ENSMUSG00000047714 ENSMUST00000060188 1 1 1 80 16 31258468 31258487 TGAAGATGAAGAAATGGCAG 58 31254804 31258428 TCACTTGTAGTAGATCCTTGAC 58 NA Nonspecific Mus musculus 50 Cd300lf ENSMUSG00000047798 ENSMUST00000106561,ENSMUST00000051264,ENSMUST00000106562 2 3 4 64 11 114979401 114981590 AGACAGAAGAAAGCTGCTG 59 114978972 114978990 TAACAGAGATCACCCTCCA 59 NA DesignRelaxed Mus musculus 50 Tigd4 ENSMUSG00000047819 ENSMUST00000062623 2 1 1 60 3 84398113 84398133 CAGGTATGGCTTAGTATTCAG 57 84398153 84398173 AGGGTCTATAGATATACCCGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gng7 ENSMUSG00000048240 ENSMUST00000092285,ENSMUST00000099462 2 2 2 173 10 80415635 80415653 TCAGGTACTAACAACGTCG 59 80414396 80414414 GAATGGATTCTCAGAGGCT 58 NA DesignNoJunction Mus musculus 50 2010305A19Rik ENSMUSG00000048351 ENSMUST00000073764 3 1 1 90 4 108004889 108004907 CAACTGTGAGAAATACGGG 58 108010732 108010750 CTTTAGGTCCTGAGTCAGG 58 NA DesignNoJunction Mus musculus 50 Olfr938 ENSMUSG00000048501 ENSMUST00000056499 2 1 1 60 9 38885990 38886009 TTGCTGTTTCAGAATGTCAC 58 38885949 38885968 GATATAGCCACATAGCGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Efna5 ENSMUSG00000048915 ENSMUST00000078839 1 1 2 110 17 62956806 62963198 GTGAGACCAACAAATGACAC 59 62956715 62956733 GAGGAACAGTAGGATTGCC 59 NA Mus musculus 50 Frmd3 ENSMUSG00000049122 ENSMUST00000056548,ENSMUST00000084474,ENSMUST00000098006 2 3 3 80 4 73807957 73807976 AAAGTTGCTAAAGAGGTGGT 59 73808016 73816557 CTGAGTAATGTTGACTCTATGC 58 NA Mus musculus 50 MGI:1201789 ENSMUSG00000049751 ENSMUST00000110620,ENSMUST00000110619,ENSMUST00000054544 1 3 3 60 12 70284077 70284098 GGACTTTCTGTAAGAAATGTGG 59 70284038 70284057 CCCTTCTTATACTGGGTCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A830091I15Rik ENSMUSG00000050132 ENSMUST00000108287,ENSMUST00000061174 1 2 2 83 11 78301118 78301137 CCTGCTTCTAAGACTCACAG 59 78300949 78301072 TCCCTAAAGAACCTCTTGC 58 NA Mus musculus 50 Bbs12 ENSMUSG00000051444 ENSMUST00000057975,ENSMUST00000108121 1 2 2 60 3 37218926 37218944 TCTCACTTGCTGTATTCCA 58 37218967 37218986 GACATATCCTAGACCAACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Jmjd2d ENSMUSG00000053914 ENSMUST00000115647 2 1 3 84 9 14269304 14289982 TGGTTTGCAATGATTGTGTC 59 14269239 14269257 TCCTCTTGTAGGCTACTGG 59 NA InUTR Mus musculus 50 Fgfr3 ENSMUSG00000054252 ENSMUST00000067150,ENSMUST00000087820 3 2 4 124 5 34072970 34074770 TCACTGTACTCAAGACTGC 58 34074858 34074876 AAACCCAATAGAATTGCCC 57 NA Mus musculus 50 Klhl18 ENSMUSG00000054792 ENSMUST00000084956 2 1 3 144 9 110332473 110332493 TATATGTGTCAGGACCACG 58 110331419 110331437 CAAACATCTTGCTTCCCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Lrtm2 ENSMUSG00000055003 ENSMUST00000068351,ENSMUST00000112756 2 2 2 125 6 119270457 119270475 GAATTCAAACACTGGCTGG 59 119267440 119267460 GTAGTTAAACATCTCCATGGG 58 NA DesignNoJunction Mus musculus 50 Eef1d ENSMUSG00000055762 ENSMUST00000109972,ENSMUST00000089681,ENSMUST00000089680,ENSMUST00000073802,ENSMUST00000023235,ENSMUST00000109976,ENSMUST00000116440,ENSMUST00000109975 2 8 9 131 15 75726770 75726788 AAGAAGATAAGGAGGCTGC 59 75726341 75726675 CAGTCTCATCATCCCAAGG 59 NA Mus musculus 50 Car10 ENSMUSG00000056158 ENSMUST00000042943,ENSMUST00000107863 1 2 5 82 11 93351924 93351942 TACACTTTGGGAGTGAGGA 59 93351988 93439994 GTGGATGAGTTGTACCTCC 59 NA Mus musculus 50 Skap1 ENSMUSG00000057058 ENSMUST00000100519 3 1 7 94 11 96351163 96351182 TTGCAGAATGAGAACCTCAG 59 96351238 96354204 AGTACAATAATGCAGCTGGA 59 NA Mus musculus 50 Cep170 ENSMUSG00000057335 ENSMUST00000057037 3 1 2 80 1 178691526 178691544 TCTGCTGCAGTAGTAATGG 59 178688631 178691484 AGATGAAGATATGGCTTCCTC 59 NA Mus musculus 50 Dub2 ENSMUSG00000058976 ENSMUST00000106892,ENSMUST00000079348 1 2 2 60 7 110567297 110567315 TACCAAACTTGTGCCTCAG 59 110567339 110567357 ATTGATCCTGTGTTTCTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hnrpa3 ENSMUSG00000059005 ENSMUST00000111964,ENSMUST00000111962,ENSMUST00000090792 3 3 5 172 2 75500965 75501628 ATGGATTTGGAGGTGATGG 59 75501764 75503095 ACCATAGTTACCTCCACCA 59 NA Nonspecific Mus musculus 50 Bcas3 ENSMUSG00000059439 ENSMUST00000108062,ENSMUST00000108061,ENSMUST00000108058,ENSMUST00000108057,ENSMUST00000074875,ENSMUST00000092821,ENSMUST00000100677 3 7 12 97 11 85345404 85345422 CAAACAGCCAATGACACTG 59 85357466 85367702 ATTTAACTTTGCATGGAGCC 59 NA Mus musculus 50 Plac8l1 ENSMUSG00000059455 ENSMUST00000081374 3 1 1 72 18 42352251 42352269 GACTCTTCAGTGTCTGCAG 59 42340034 42340052 TCACACTCAAGACACATGG 59 NA DesignNoJunction Mus musculus 50 Rgs3 ENSMUSG00000059810 ENSMUST00000098031 1 1 10 80 4 62244732 62263957 TATCTCACCACCTTTGGTC 58 62264001 62266535 TTTGCCTTCTATGATGTGC 58 NA Mus musculus 50 Hspa2 ENSMUSG00000059970 ENSMUST00000080449,ENSMUST00000110404 1 2 2 60 12 77506767 77506785 TCATCAAGAGAAACACCAC 57 77506808 77506827 TCTGAGTAGGTAGTGAAGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rp2h ENSMUSG00000060090 ENSMUST00000115391,ENSMUST00000115387,ENSMUST00000033372 1 3 5 80 X 19974363 19974383 GGAATTTAATGGAGATGACGC 59 19974423 19974788 GATACAAACATCTTTGTCCCG 59 NA Mus musculus 50 Nrg2 ENSMUSG00000060275 ENSMUST00000115705,ENSMUST00000115704 1 2 6 86 18 36191585 36191997 TAAGCAAAGTGTCCTGTGG 59 36187051 36187070 CAATTCAAATCCAAGGTGCT 59 NA Mus musculus 50 Arf2 ENSMUSG00000062421 ENSMUST00000057921,ENSMUST00000063347,ENSMUST00000107008 2 3 3 126 11 103843024 103843042 TGACAGTAATGACCGAGAG 58 103843130 103844919 CATAGCATTAGGAAGATCCTG 57 NA Mus musculus 50 EG435970 ENSMUSG00000064194 ENSMUST00000107989,ENSMUST00000072829 3 2 2 90 7 50442907 50444675 GATAGAAGATATGGAAGGCAC 57 50444726 50444745 GACTGTGATATTTGAAGGCT 57 NA Nonspecific Mus musculus 50 D12Ertd647e ENSMUSG00000064215 ENSMUST00000085065,ENSMUST00000079294,ENSMUST00000066701,ENSMUST00000076702 2 4 5 91 12 104673712 104673730 AGATGACATCTTCAGCAGC 59 104674774 104674792 CTGTGTTAACAGGATGAGC 58 NA DesignNoJunction Mus musculus 50 Aurkaip1 ENSMUSG00000065990 ENSMUST00000105592,ENSMUST00000105591,ENSMUST00000084097 1 3 3 168 4 155206831 155206849 CAAGTACCGTAAACTGGTC 57 155207074 155207092 CTTCAGGTAGATCTTCGGG 58 NA DesignNoJunction Mus musculus 50 Col4a4 ENSMUSG00000067158 ENSMUST00000087027 2 1 2 91 1 82505820 82515512 GATCAGATGTGATATACTGTCG 57 82449484 82449503 TGTTTGCTTGATCCATAGAG 57 NA Mus musculus 50 Rya3 ENSMUSG00000068008 ENSMUST00000088950,ENSMUST00000109760 1 2 2 85 2 153751587 153751605 CTATCTCTTCAGCACCGTG 59 153751654 153753034 CATTCCTGGGAACCATCTC 59 NA Mus musculus 50 Es31 ENSMUSG00000069922 ENSMUST00000093222 2 1 2 92 8 107577571 107579485 GGCTTCTACTCAAATTCTGGA 59 107579539 107579557 TATGGGCTAATAAGGGCCT 59 NA Mus musculus 50 Zadh1 ENSMUSG00000072946 ENSMUST00000101216 2 1 2 94 12 85649374 85651879 AAGCTAAAGGTCAAGGAGAC 59 85654914 85654932 ATCTGTTTCCCTACGTTGC 59 NA Mus musculus 50 Flt3l ENSMUSG00000074129 ENSMUST00000003516,ENSMUST00000085377 3 2 2 104 7 52389880 52390503 AATCTTCAGGACGAGAAGC 59 52389794 52389812 AAGCGTTTGCATCTTAGAC 58 NA Mus musculus 50 Gramd2 ENSMUSG00000074259 ENSMUST00000098661,ENSMUST00000114056 2 2 2 89 9 59562069 59563737 CATCTTTGTGATGATCTGCT 57 59563789 59563807 CTCAGGGAACATAATTGCT 57 NA Mus musculus 50 Bglap-rs1 ENSMUSG00000074489 ENSMUST00000075523 3 1 3 191 3 88173525 88173543 TTCTGCTGGTCAGAATCAG 59 88173065 88173226 GACATGAAGGCTTTGTCAG 58 NA InUTR Mus musculus 50 Gm826 ENSMUSG00000074623 ENSMUST00000109474,ENSMUST00000099127 2 2 3 91 2 160152854 160152872 TGGTCAAGAAACGACAGAG 59 160137784 160137803 CTCCAGAAATTCCTCAGGAC 59 NA DesignNoJunction, InUTR Mus musculus 50 Gm114 ENSMUSG00000074749 ENSMUST00000099278,ENSMUST00000109980 3 2 2 95 2 146686910 146689452 TAAGTGCAGAGCTAAGCTG 59 146689510 146689529 TATCCTTGGTTTCGAACCTG 59 NA Mus musculus 50 Prdm11 ENSMUSG00000075028 ENSMUST00000111272,ENSMUST00000111273 1 2 4 120 2 92826932 92829396 TACCAGCTATGATGAAGACG 58 92826831 92826849 AGATGAATAGAGCAGCGTG 59 NA Mus musculus 50 Fsip2 ENSMUSG00000075249 ENSMUST00000099964 1 1 1 60 2 82823246 82823264 ATGCCATCTGGTTCTAGAC 58 82823285 82823306 GTGTAAAGTTTGGTTTCCTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV1-131 ENSMUSG00000076505 ENSMUST00000103306 3 1 1 65 6 67716198 67716216 ATTGGTTACAACAGAGGCC 59 67716151 67716169 GGTCCAGTTTGGATACCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 9130401M01Rik ENSMUSG00000022362 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Syngr1 ENSMUSG00000022415 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-7b ENSMUSG00000065491 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-328 ENSMUSG00000070130 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-291a ENSMUSG00000078008 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Cdh1 ENSMUSG00000000303 ENSMUST00000000312 1 1 1 80 8 109177748 109177766 ATCATTGAGAGGGAGACAG 58 109177808 109180732 AGAATAGAGGATGTACTTGGC 58 NA Mus musculus 50 1300007F04Rik ENSMUSG00000000686 ENSMUST00000094004,ENSMUST00000000700 1 2 3 197 11 77329330 77329348 GACTTACATTCGCTTCCGA 59 77329509 77329527 AAGAACCCACGTTCATAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mmp11 ENSMUSG00000000901 ENSMUST00000000924 2 1 1 90 10 75390227 75391034 TCACCTATAGGATCCTCCG 59 75390155 75390173 ACTTCACTCCATACCTGGA 59 NA Mus musculus 50 Dlx3 ENSMUSG00000001510 ENSMUST00000092768 1 1 1 169 11 94983141 94983159 CAGAAAGCCCAGTATCTGG 59 94984802 94984820 ATGGAGTCACTGTTGTTGG 59 NA DesignNoJunction Mus musculus 50 Sdf2 ENSMUSG00000002064 ENSMUST00000002133 1 1 1 106 11 78064704 78068360 CTGGAAACCAGGAAGTGAG 59 78068430 78068448 CACCTCACCATCTCTAACC 59 NA Mus musculus 50 Angptl4 ENSMUSG00000002289 ENSMUST00000002360 3 1 1 89 17 33917787 33917805 CAATTGTTCCAGAAGGTGG 58 33917581 33917734 CAAGAGGTCTATCTGGCTC 58 NA Mus musculus 50 Bcam ENSMUSG00000002980 ENSMUST00000003061 1 1 1 88 7 20345702 20345720 GTATTCCTGAACAGCAGCA 59 20345527 20345650 GTCACAGAATCCTTGGTCC 59 NA Mus musculus 50 Coro1c ENSMUSG00000004530 ENSMUST00000004646 2 1 1 135 5 114297546 114297564 GAGATCACGGATGAATCCC 59 114296199 114297447 GAAGCTTGAAGAATCTGGC 58 NA Mus musculus 50 Casp14 ENSMUSG00000005355 ENSMUST00000005488 2 1 1 80 10 78176181 78176748 AACTGACAGAAGAGATCACC 59 78176120 78176138 CTTCAGGGTTCACTTTCCT 59 NA Mus musculus 50 Scnm1 ENSMUSG00000005629 ENSMUST00000107226,ENSMUST00000005770 1 2 2 84 3 94937024 94937130 ATTTGTCCAGTCTGAAGCT 58 94936958 94936976 TTCAATTCGTTCTGCTGTC 58 NA Mus musculus 50 Panx3 ENSMUSG00000011118 ENSMUST00000011262 3 1 1 132 9 37471810 37474196 AAGGCTCTTCCCTACTCTC 59 37471696 37471714 TGTAAGACTTGTCCAGCTC 58 NA DesignNoJunction Mus musculus 50 BC053440 ENSMUSG00000014907 ENSMUST00000015051 2 1 1 195 8 69407492 69409671 AAGCTCAAACAGGACAGAG 59 69412970 69412989 AATTCTCATGCACTTCACCA 59 NA Mus musculus 50 Gorasp2 ENSMUSG00000014959 ENSMUST00000112209,ENSMUST00000028509,ENSMUST00000112201,ENSMUST00000112205 3 4 4 80 2 70516656 70517492 TACCGTCATGAATGAGTCTG 59 70517534 70517553 TTGTACACGTAGAGCTTCAG 59 NA Mus musculus 50 Tox4 ENSMUSG00000016831 ENSMUST00000022766,ENSMUST00000071842 1 2 2 124 14 52911883 52912202 TAGTTCCTGAGGTGGAGTC 59 52912290 52912308 CTTACTGACAACAGGAGGG 59 NA Mus musculus 50 Slc12a7 ENSMUSG00000017756 ENSMUST00000068263,ENSMUST00000017900 3 2 2 84 13 73931509 73931528 GTGATGAGTACTTTGCACAG 58 73931574 73932555 CACAGGTTATCCAGGAAGAC 59 NA Mus musculus 50 Pscd4 ENSMUSG00000018008 ENSMUST00000109713,ENSMUST00000043069 2 2 2 85 15 78436334 78437395 CCCTAATAAGGGCATCCAG 59 78437444 78437462 CACCCTTGTACAGGAACTG 59 NA Mus musculus 50 Dld ENSMUSG00000020664 ENSMUST00000110857,ENSMUST00000002980 3 2 2 80 12 32028305 32029703 CCAGTTAGGCTTTAAGACAG 57 32028244 32028262 GAAGGAATACAACCAACGT 57 NA Mus musculus 50 Galntl1 ENSMUSG00000021130 ENSMUST00000021558 1 1 1 83 12 81684708 81685004 ACTAAACCCATCAGGACAC 58 81685050 81685069 ATCATACTTTCCCAGATGGT 58 NA Mus musculus 50 Pcnx ENSMUSG00000021140 ENSMUST00000021567,ENSMUST00000095564,ENSMUST00000095565 2 3 3 80 12 83053921 83057228 TACTCAAGAGTGTTCAGCC 58 83059689 83059709 AGTAAACTGGTCTACTGTAGG 58 NA Mus musculus 50 Lect2 ENSMUSG00000021539 ENSMUST00000062806,ENSMUST00000109886 2 2 2 85 13 56647122 56648174 AGTACTCTGCTCAAAGAACC 59 56647056 56647074 AGTGAATGGTGCATACACC 59 NA Mus musculus 50 Smn1 ENSMUSG00000021645 ENSMUST00000022147 1 1 3 80 13 100896936 100897770 TTGAAACAGTGGAAAGTTGG 58 100897813 100897831 GGACGTAATAGTAGCTGGG 58 NA Mus musculus 50 Gfm2 ENSMUSG00000021666 ENSMUST00000109434,ENSMUST00000042084,ENSMUST00000022170 2 3 3 80 13 97911954 97912970 GTGCACCTTAATACCATGTG 58 97913013 97913031 GTTTCTTGTAAGAGGCAGC 58 NA Mus musculus 50 Oit1 ENSMUSG00000021749 ENSMUST00000022269 1 1 1 109 14 9189669 9190859 GACGAAATTATCATGAGTCCAG 58 9187986 9188004 TACATGTCAAAGCTGTCCT 58 NA Mus musculus 50 Wbp4 ENSMUSG00000022023 ENSMUST00000022601 1 1 1 80 14 79867265 79869925 TACAGAAACAGGAGAATCCA 57 79867204 79867223 CTGTCCTTACTAGAAAGCAC 57 NA Mus musculus 50 Bnip3l ENSMUSG00000022051 ENSMUST00000111115,ENSMUST00000022634 2 2 2 60 14 67608272 67608290 AGACTGGGTATCAGACTGG 59 67608109 67608249 GAAATGGAACTCTTTGGGTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Trim52 ENSMUSG00000022113 ENSMUST00000022708 1 1 1 61 14 106506392 106506410 GTCATAGCCATAGACAGCA 58 106506435 106506453 GTCTTCTTCCTCGTCATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Grhl2 ENSMUSG00000022286 ENSMUST00000022895,ENSMUST00000110353,ENSMUST00000049749 1 3 3 80 15 37221358 37221376 GAGCAGCTGAAATACTGGA 59 37221417 37239430 CTTGTAATCAGCAATGTCAAGG 59 NA Mus musculus 50 Enpp2 ENSMUSG00000022425 ENSMUST00000041591 1 1 1 80 15 54713733 54713753 TCAGTTTATGCCTTCTACTCC 59 54707304 54713691 AGGATTTGTCATCTCAGGG 58 NA Mus musculus 50 Maf1 ENSMUSG00000022553 ENSMUST00000023212 3 1 1 84 15 76182912 76182930 GAGAACTCCAGCTTTGAGG 59 76182978 76183089 AGTAGCTTTCAATCCTGCC 59 NA Mus musculus 50 Rpl24 ENSMUSG00000022601 ENSMUST00000114450,ENSMUST00000023269 2 2 2 61 16 55967234 55967252 AGATAAACTGGACTGTCCT 57 55967277 55969634 TTGAATTTCTTCCGACTGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Zfp148 ENSMUSG00000022811 ENSMUST00000089677 3 1 2 92 16 33467050 33468189 TCTTCATTCATACAGGCGA 58 33468245 33468263 GGATCTTCTCGTGTCTCTG 59 NA Mus musculus 50 Stfa2l1 ENSMUSG00000022902 ENSMUST00000023619 2 1 1 196 16 36408378 36408396 AATTGGAGGTTTGTCAGAG 57 36404205 36404223 TTATGTGGAGGTAGCAACC 58 NA DesignNoJunction Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000114001,ENSMUST00000114002,ENSMUST00000064797,ENSMUST00000113999,ENSMUST00000095909,ENSMUST00000113989,ENSMUST00000056482,ENSMUST00000113996,ENSMUST00000113993,ENSMUST00000116575,ENSMUST00000023678,ENSMUST00000113986 2 12 16 83 16 91785582 91793855 CTTAGCACAAATATGGGCG 58 91793901 91793920 ATAAGCTTCATGGCTATGGA 58 NA Mus musculus 50 Pcdhgc5 ENSMUSG00000023036 ENSMUST00000055935,ENSMUST00000091934 2 2 9 60 18 37981543 37981562 AGGGAGTTCTATAAGCAGTC 58 37981584 37981603 ACTTTAGTGTGCCATCTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tarbp2 ENSMUSG00000023051 ENSMUST00000023813,ENSMUST00000100168 3 2 2 90 15 102353474 102353627 GGATATTGAGGAACTGAGCC 59 102353680 102353698 GGTTGCAGAACCATAACAC 59 NA Nonspecific Mus musculus 50 Ccrn4l ENSMUSG00000023087 ENSMUST00000023849 3 1 1 159 3 51051862 51051880 AACTTCTGGAGGAATGCAG 59 51053625 51053643 AAGTTGTCTTTGCCTTCTC 57 NA DesignNoJunction Mus musculus 50 Snf1lk ENSMUSG00000024042 ENSMUST00000024839 1 1 1 83 17 31991207 31991225 TCTGGAGAAGATCTACCGG 59 31988531 31991163 GTCTCCATAACCTGATAAAGCT 59 NA Mus musculus 50 Ralbp1 ENSMUSG00000024096 ENSMUST00000024905 1 1 1 80 17 66207047 66207067 AGATTATGGGAAGTACAGAGG 58 66203525 66207006 CTTGGTTTCACACTCTTGTC 58 NA Mus musculus 50 Gbl ENSMUSG00000024142 ENSMUST00000070888 2 1 1 81 17 24613387 24614136 TCAATAGTGCCGGAAACTG 59 24613324 24613342 TTGGTCTTAGGGATGAGCT 59 NA Mus musculus 50 Fkbp5 ENSMUSG00000024222 ENSMUST00000079413,ENSMUST00000114792,ENSMUST00000062167 2 3 3 81 17 28543212 28547470 AACTGTGTACTTCAAGGGAG 59 28543150 28543168 GTATTCCATCTCCAGCCAG 59 NA Mus musculus 50 Mrpl27 ENSMUSG00000024414 ENSMUST00000025278 1 1 1 94 11 94517852 94517870 CATCCAAGAAGACAGGTGG 59 94517928 94518310 GTGAACGTAGTGACCTTCC 59 NA Nonspecific Mus musculus 50 Mbd2 ENSMUSG00000024513 ENSMUST00000074058 2 1 3 179 18 70728612 70740315 ACTACTTCAGTCCAAGTGG 58 70740458 70752866 CTGGTTTACCCTTGTTCTG 57 NA Mus musculus 50 Nars ENSMUSG00000024587 ENSMUST00000025483 2 1 1 80 18 64670154 64670173 GCATTAGAAGGATACAGAGG 57 64668956 64670112 CATCAAATTCTTTCCTTGCC 57 NA Mus musculus 50 Dmrt1 ENSMUSG00000024837 ENSMUST00000087525 2 1 2 105 19 25584263 25584281 GAGAATAATGCCAGCAACC 58 25584349 25634371 CTCTGAGGTCTTCATCTGAG 58 NA Mus musculus 50 Peli3 ENSMUSG00000024901 ENSMUST00000025834 1 1 1 137 19 4935092 4936130 AGACATGTTCCAGATTGGC 59 4934973 4934991 TCACAGAGAATTCTGCAGG 59 NA Mus musculus 50 Dntt ENSMUSG00000025014 ENSMUST00000051806,ENSMUST00000112200 2 2 2 81 19 41117404 41117422 AGGATGGGTTTCAGAACTC 58 41117467 41120686 AGAGGAATCCTGCTTTCTG 58 NA Mus musculus 50 Ablim1 ENSMUSG00000025085 ENSMUST00000099294,ENSMUST00000111559,ENSMUST00000111550,ENSMUST00000111558,ENSMUST00000111555,ENSMUST00000079360,ENSMUST00000111546,ENSMUST00000111541,ENSMUST00000036802,ENSMUST00000111538,ENSMUST00000111544,ENSMUST00000111524 1 12 15 88 19 57207440 57209084 AGTACATCAGCAAGGATGG 59 57207370 57207388 GATAAACTGGTGACAGGCT 59 NA Nonspecific Mus musculus 50 Rab40b ENSMUSG00000025170 ENSMUST00000106107,ENSMUST00000026171 3 2 2 88 11 121219232 121219251 TTACAGAGTCCTTCACAGAG 58 121218612 121219181 CAAACTCAGTACCTTGCTC 58 NA Mus musculus 50 Cdh9 ENSMUSG00000025370 ENSMUST00000026432 1 1 1 80 15 16758151 16758169 GAACAGTGCTAAAGTGGTC 58 16758210 16758709 GTCTTTATTATGCCTGATTCCG 59 NA Mus musculus 50 Prap1 ENSMUSG00000025467 ENSMUST00000026540 3 1 1 91 7 147282089 147282578 AGGAAACAGAGAAGGTCTG 58 147282633 147282651 CTTCTGTTTGGGTTCAGGA 59 NA Mus musculus 50 Msx3 ENSMUSG00000025469 ENSMUST00000055353,ENSMUST00000106084 2 2 2 66 7 147233905 147233924 ATACTTATCCATTGCGGAGC 59 147233858 147233876 CTTGACCTGAGTCTCAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Homer2 ENSMUSG00000025813 ENSMUST00000026922 2 1 1 113 7 88763591 88769145 ATTCCCAAGAATCTGGGTG 59 88763496 88763514 CAGACTTGAGGTGAGTGTC 59 NA Mus musculus 50 Creb1 ENSMUSG00000025958 ENSMUST00000049932,ENSMUST00000087366,ENSMUST00000027097 3 3 4 135 1 64597532 64605082 CACATTAGCCCAGGTATCC 59 64605181 64605199 CTGGATAACTGATGGCTGG 59 NA Mus musculus 50 Ica1l ENSMUSG00000026018 ENSMUST00000027172 1 1 1 80 1 60063128 60063146 AGGAAATCTCACTGCAGAC 59 60060538 60063086 GACAAAGCTACCTTATTGAGG 58 NA Mus musculus 50 Mr1 ENSMUSG00000026471 ENSMUST00000027744 3 1 1 91 1 156979757 156983716 TAGAAAGAACAGAGCATCCAG 59 156979686 156979704 GTAGAAGCCATGAGCTCTG 59 NA Mus musculus 50 Mllt10 ENSMUSG00000026743 ENSMUST00000028076,ENSMUST00000114680,ENSMUST00000114671,ENSMUST00000091418,ENSMUST00000114670,ENSMUST00000114669 1 6 6 80 2 18084503 18091888 AGTTGGCTCAGAAATTTCC 57 18092676 18092694 ATTGCATTCAGCAACTCTG 58 NA Mus musculus 50 Acbd5 ENSMUSG00000026781 ENSMUST00000028121,ENSMUST00000114526,ENSMUST00000114529 1 3 3 86 2 22955211 22955230 TCATTAGATTGCAGGAGGAC 59 22955279 22965777 AAGATAATTTCGCCTGCGA 59 NA Mus musculus 50 Barhl1 ENSMUSG00000026805 ENSMUST00000113849,ENSMUST00000113847 1 2 3 189 2 28770895 28770913 TTCTGATCAGGGACATCCT 59 28767075 28770743 TCCTCCTTCACTTTGTACTC 58 NA Mus musculus 50 Abl1 ENSMUSG00000026842 ENSMUST00000075759,ENSMUST00000113455,ENSMUST00000028190,ENSMUST00000113454 3 4 4 83 2 31640287 31645796 GAAGACCTTGAAGGAGGAC 59 31645842 31645861 AGGTTAGGGTGTTTGATCTC 59 NA Mus musculus 50 Slc4a10 ENSMUSG00000026904 ENSMUST00000054484,ENSMUST00000112480,ENSMUST00000102735 2 3 3 82 2 62124951 62124970 GTTCTTCTCCACAGTTACCA 59 62125015 62126777 CTATGGATCGAACCTTGGT 58 NA Mus musculus 50 Depdc7 ENSMUSG00000027173 ENSMUST00000028595 2 1 1 88 2 104563524 104563542 AACAGGGAGGAGTTTAGAC 58 104563311 104563473 CGATTGTCACTTTCTTCCTG 58 NA Mus musculus 50 2210009G21Rik ENSMUSG00000027281 ENSMUST00000068516,ENSMUST00000028737,ENSMUST00000099311,ENSMUST00000099312,ENSMUST00000110094 3 5 5 91 2 136891953 136893334 GCTCTGAAGGAAATTGTGAG 58 136893388 136893406 TCACTAGATCTTCCCACGA 59 NA Mus musculus 50 Ttbk2 ENSMUSG00000027284 ENSMUST00000028736,ENSMUST00000110694,ENSMUST00000028740,ENSMUST00000085840,ENSMUST00000057135 1 5 6 80 2 120574223 120574241 CTGCAAGTCAGTTCATCAC 58 120572016 120574180 GAATTGTAATCGCAGTCAGG 58 NA Mus musculus 50 Cdc25b ENSMUSG00000027330 ENSMUST00000028804,ENSMUST00000079857 2 2 2 81 2 131019899 131020080 ATCTCACCAGAAACTATGGTG 59 131020123 131020141 ATCTGCAGTCCACAATGAC 59 NA Mus musculus 50 Xrn2 ENSMUSG00000027433 ENSMUST00000028921 3 1 1 80 2 146855082 146855100 ACTTGCAGATAGTCTTCCT 57 146855143 146855244 TCTCTTTCCAGATACTCTCG 57 NA Mus musculus 50 Snta1 ENSMUSG00000027488 ENSMUST00000109728,ENSMUST00000028991 2 2 2 87 2 154229516 154229534 TGAAGATTTGTCCTCTGCC 59 154209710 154229467 CATGTACTTAACCTCCAACAC 58 NA Mus musculus 50 0610011L14Rik ENSMUSG00000027628 ENSMUST00000109570 3 1 2 87 2 156375751 156376391 GTTGGGAATACAGGAGACAG 59 156376440 156376459 CTAACTCTGGATCCATCTGC 59 NA InUTR Mus musculus 50 Pik3ca ENSMUSG00000027665 ENSMUST00000108243,ENSMUST00000029201 2 2 2 60 3 32348483 32348501 TGCTTCTGTCTGTCAAGTG 59 32348522 32348847 TTTACTAAGCAGTACATCTGGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Mfsd1 ENSMUSG00000027775 ENSMUST00000029344 3 1 1 80 3 67400663 67401958 GATTGCTATGTGTCTCCTG 57 67402002 67402020 TCAGGAACTATGAATGCCA 58 NA Mus musculus 50 Lce1m ENSMUSG00000027912 ENSMUST00000029520 1 1 1 62 3 92822962 92822980 ATCCATTACTCGCTGAGTG 59 92822541 92822559 GACAGGACATCTCCAAAGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Extl2 ENSMUSG00000027963 ENSMUST00000029575,ENSMUST00000106501,ENSMUST00000106502 3 3 3 80 3 115728248 115728267 TTGATGGTAGACGATGACAC 59 115728310 115729945 CTGATCAGGAAATTGCTGC 59 NA Mus musculus 50 Itga10 ENSMUSG00000028102 ENSMUST00000029744 3 1 1 80 3 96461371 96461390 TGAGGTTCACCCTTATAGGA 59 96461432 96461593 CAACCAAGATTCTGAACCCT 59 NA Mus musculus 50 Adh5 ENSMUSG00000028138 ENSMUST00000005964 2 1 1 88 3 138117694 138117712 GTTGACGAATTTGTGACCG 59 138117764 138118060 ACAGTTCGAATGCTGTCTC 59 NA Mus musculus 50 Bdh2 ENSMUSG00000028167 ENSMUST00000029817 1 1 1 81 3 134951238 134951256 AAGGAGCCAAAGTCATAGC 59 134951300 134952534 ACTCGAGTTTGAATACCTCG 59 NA Mus musculus 50 Lrrc7 ENSMUSG00000028176 ENSMUST00000029826,ENSMUST00000106044 1 2 2 80 3 157790225 157790245 TGGGCTTGGATTTAGTATCAG 59 157767453 157790186 GTAACAAAGATACCCTTGTCAG 58 NA Mus musculus 50 Ephb2 ENSMUSG00000028664 ENSMUST00000059287,ENSMUST00000105846,ENSMUST00000105845 3 3 3 112 4 136211336 136211837 TGATGATGGAGGACATTCTC 58 136211243 136211261 CTCTACAGACTGGATCTGG 58 NA Mus musculus 50 Pqlc2 ENSMUSG00000028744 ENSMUST00000105801,ENSMUST00000053862,ENSMUST00000094564 2 3 3 99 4 138856995 138857013 ACAAAGAAGGAGGTCATCG 59 138856314 138856932 ACTGCCGTATGAAATTGGT 59 NA Mus musculus 50 Smpdl3b ENSMUSG00000028885 ENSMUST00000030709 1 1 1 82 4 132294064 132294166 TCTATGACAACACAGGTGC 59 132294000 132294018 CACTCCAGGTAATGTGGTC 59 NA Mus musculus 50 Rpl22 ENSMUSG00000028936 ENSMUST00000103191 1 1 1 168 4 151704213 151704231 CTTCAGAGGTGCCTTTCTC 59 151706514 151706532 TAATCCTCGTCTTCCTCCT 58 NA DesignNoJunction Mus musculus 50 Ssu72 ENSMUSG00000029038 ENSMUST00000030905,ENSMUST00000105595 2 2 2 86 4 155105565 155106048 TTGTAGAAGATCTGAACTCCAG 59 155106095 155106113 CCTCTTCATGGTTGTCCTG 59 NA Mus musculus 50 NP_001074703.1 ENSMUSG00000029263 ENSMUST00000031189 2 1 1 80 5 108773337 108773355 TTGGAACATATGTAGGGCC 59 108773399 108776866 TCAGTGCTGAATTGTTTCC 58 NA Mus musculus 50 Mrpl1 ENSMUSG00000029486 ENSMUST00000036437 2 1 1 80 5 96656762 96660712 GTTAAGAAGATCATGGATGACG 58 96660752 96660771 TAAAGGGTTAAGTTCACCCA 58 NA Mus musculus 50 Foxp2 ENSMUSG00000029563 ENSMUST00000115477 3 1 4 140 6 14938338 14938356 GAACTCTGTTGAAGCTCGA 59 14938460 15034495 TTGGAGAAGAAGCCATGTG 59 NA InUTR Mus musculus 50 4921520G13Rik ENSMUSG00000029607 ENSMUST00000079624 2 1 2 141 5 144654494 144655391 GTCATGTAAGCAGACACAG 58 144652680 144652698 CATCAGGTGAAGGGTAGTG 59 NA DesignNoJunction Mus musculus 50 Dusp11 ENSMUSG00000030002 ENSMUST00000032071 2 1 1 88 6 85899784 85900022 CATGTCAGAAAGAACCGGA 59 85899714 85899732 TTGTTGGTGTAGACTTGCT 59 NA Mus musculus 50 Chchd6 ENSMUSG00000030086 ENSMUST00000032172 2 1 1 281 6 89545483 89545501 CTTCGAGATGGATGAGGAG 58 89519397 89524371 ACTTTAACGTCTGTCAGAGG 59 NA DesignRelaxed Mus musculus 50 Csda ENSMUSG00000030189 ENSMUST00000111988,ENSMUST00000032309,ENSMUST00000087865,ENSMUST00000081659 3 4 4 173 6 131318451 131318469 CGTCCCTACAACTATAGGC 58 131315410 131317787 ATTCTTTAGGTCACCCTGC 59 NA Mus musculus 50 Gprc5d ENSMUSG00000030205 ENSMUST00000032327 3 1 2 60 6 135057755 135057774 CATATGGTACTCCCATTCAG 57 135056249 135056267 GATGGGATGAGATACTCCC 58 NA DesignNoJunction Mus musculus 50 Gprc5d ENSMUSG00000030205 ENSMUST00000111922,ENSMUST00000032327 3 2 2 68 6 135066044 135066062 CTTCAGGATGGATACCCAG 58 135056247 135056266 CTGATGGGATGAGATACTCC 58 NA DesignNoJunction, InUTR Mus musculus 50 Kras ENSMUSG00000030265 ENSMUST00000032399,ENSMUST00000111710,ENSMUST00000111709,ENSMUST00000032397 3 4 4 92 6 145182936 145195224 TACGATAGAGGACTCCTACAG 59 145182864 145182882 CTGTACTCCTCTTGACCTG 58 NA Mus musculus 50 Slc17a6 ENSMUSG00000030500 ENSMUST00000032710 3 1 1 81 7 58923387 58924399 CAATGACAAAGAATAAGTCCCG 59 58924439 58924459 AATATGACTCCACCATAGTGG 58 NA Mus musculus 50 Lyrm1 ENSMUSG00000030922 ENSMUST00000106518,ENSMUST00000054440,ENSMUST00000106517,ENSMUST00000106516 2 4 4 76 7 127053473 127057701 AAATCTCACAGACCCAGAG 58 127057741 127057759 GGTAATGCAGTCCAATCTC 57 NA DesignNoJunction Mus musculus 50 St5 ENSMUSG00000031024 ENSMUST00000079282,ENSMUST00000077909,ENSMUST00000084738 3 3 3 82 7 116668822 116668843 GAACAGTATCTAGAAGAGCTCC 59 116668179 116668779 AACTTCATCTTGTTGCCCA 59 NA Mus musculus 50 Fgf3 ENSMUSG00000031074 ENSMUST00000033392,ENSMUST00000105898 1 2 2 114 7 152026577 152026595 CATCCTGGAGATTACTGCG 59 152026673 152028491 GTTGTAGTGATCCGAAGCA 59 NA Mus musculus 50 Rbmx ENSMUSG00000031134 ENSMUST00000098470,ENSMUST00000033470,ENSMUST00000114730,ENSMUST00000114726 2 4 4 91 X 54644509 54644528 ATAAGTCAAGAGGATTCGCT 58 54643401 54644455 CCCATCTAAGGACTTTCCA 58 NA Mus musculus 50 Rab39b ENSMUSG00000031202 ENSMUST00000033545 2 1 1 60 X 72820338 72823141 AGAGGTTCAGATCCATCAC 58 72820296 72820317 AATAAGAGAAGACCACCTACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Arhgap6 ENSMUSG00000031355 ENSMUST00000033721,ENSMUST00000112131,ENSMUST00000112127,ENSMUST00000112126 2 4 6 81 X 165739696 165739715 GAGGAGCCTTTCAATATCTG 57 165739759 165740257 CATAAGAGCCTGTCATTCC 57 NA Mus musculus 50 Thex1 ENSMUSG00000031527 ENSMUST00000033927 2 1 1 80 8 36545774 36554267 AGCTTGAAACAAGAGGAGTC 59 36545713 36545732 CTTTCAGCATCAACTTCTGC 59 NA Mus musculus 50 D230025D16Rik ENSMUSG00000031889 ENSMUST00000034361 3 1 1 96 8 107755096 107758385 CTCTACAGTGAGCAGTCTC 58 107758445 107758463 TGAGTCTCTGGTTGAAAGC 59 NA Mus musculus 50 Pdgfd ENSMUSG00000032006 ENSMUST00000116645 2 1 2 110 9 6337340 6337359 TTAAGCACTTCAATCCAGTG 58 6337430 6376903 CTTCAATACCTTTGGACTTCC 58 NA Mus musculus 50 Neo1 ENSMUSG00000032340 ENSMUST00000068664,ENSMUST00000114098,ENSMUST00000114096 3 3 3 80 9 58754591 58754692 AACACGAAGTACAAGAATGC 58 58754530 58754550 GAACTCATAGAGCGTATTTGG 58 NA Mus musculus 50 Axud1 ENSMUSG00000032515 ENSMUST00000035101 1 1 1 80 9 119882321 119882491 TAAGTGCCAGATGGATCAC 59 119882259 119882277 AATTCCACTCGACCATTGG 59 NA Mus musculus 50 D430042O09Rik ENSMUSG00000032743 ENSMUST00000042859 1 1 2 126 7 133004104 133004122 GAAGTAGTAGGCAAGGACG 59 133004212 133005139 TGAAGGGACATTTGTCCAG 59 NA Mus musculus 50 Rspo4 ENSMUSG00000032852 ENSMUST00000042217 1 1 1 88 2 151693668 151694312 AACAGGTGCAAGAAATGTG 58 151694364 151694382 TTGTATAGGTGAAACCGCC 59 NA Mus musculus 50 Cst10 ENSMUSG00000033156 ENSMUST00000109939 2 1 3 60 2 149231304 149231322 ACCTGTATCTTAGCAAGCC 59 149231346 149235719 TTACAGATGACCCTCTGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Arhgef5 ENSMUSG00000033542 ENSMUST00000031750 3 1 1 83 6 43235414 43237543 TCCTTGAGTGTTATGACTCC 58 43237589 43237607 CCTTCTCTAGTGCCAACTC 59 NA Mus musculus 50 Tnks1bp1 ENSMUSG00000033955 ENSMUST00000111605 2 1 1 152 2 84910378 84910396 AGGTAGAAGAGGTGGATGG 59 84910512 84910779 CAAGGATCTCAGTGTCCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Kctd9 ENSMUSG00000034327 ENSMUST00000078053,ENSMUST00000111096 1 2 2 80 14 68355760 68356444 ACTTAGAGGGTGCTAATCTG 58 68356487 68356505 TTAAGGTGGCAACTCTGAG 59 NA Mus musculus 50 Dak ENSMUSG00000034371 ENSMUST00000037678 3 1 1 90 19 10667717 10667824 AGGACAATGCTGGATTCTC 59 10667645 10667663 CTTTAGTCAGGACTGGGAG 58 NA Mus musculus 50 Sec22a ENSMUSG00000034473 ENSMUST00000043521 3 1 1 98 16 35329692 35347696 AGATTTCTTCTGCCCATCAG 59 35329613 35329634 CTCGAATTAAATTCAGAGCTCC 59 NA Mus musculus 50 Ccdc122 ENSMUSG00000034795 ENSMUST00000048208 1 1 2 93 14 77468672 77468690 TGATGCTGTAGAGCAAGTC 59 77468746 77491483 AAGTTCAATCTGCAACTGGA 59 NA Mus musculus 50 Dopey1 ENSMUSG00000034973 ENSMUST00000038579,ENSMUST00000098498,ENSMUST00000034987 1 3 3 80 9 86396638 86396656 AGAAAGCACTCTCATGCAG 59 86396698 86397793 ATTACAGGTCCTAGTTCAGGT 59 NA Mus musculus 50 Gpr33 ENSMUSG00000035148 ENSMUST00000040161 1 1 1 60 12 53124765 53124783 GATTTCTGCCACTATCCTC 57 53124723 53124741 GTGGTCATCATGTGTTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc106 ENSMUSG00000035228 ENSMUST00000108571,ENSMUST00000045543 1 2 2 164 7 5009493 5009599 AGAAATGTTGAGGAGCCTC 59 5009727 5009745 GAATTTGTCCAGCTGACAC 59 NA Mus musculus 50 Tmem98 ENSMUSG00000035413 ENSMUST00000040865 2 1 1 87 11 80626181 80627728 TATGATTCCAAGCCCATCG 59 80627779 80627797 TGATGACGACATCATCCAG 59 NA Mus musculus 50 Galm ENSMUSG00000035473 ENSMUST00000039205 1 1 1 86 17 80537430 80537448 ATAGGTGGGAAGGAGTACC 59 80537497 80544328 CCAGAGGACCTTATCAAACC 59 NA Mus musculus 50 Tgfbi ENSMUSG00000035493 ENSMUST00000045173 1 1 1 80 13 56715634 56715655 CACCAACAAGAAATACTTCACC 59 56715694 56724935 TCATAACTGATGACTGTCGAC 59 NA Mus musculus 50 Zswim4 ENSMUSG00000035671 ENSMUST00000039480 1 1 1 103 8 86743800 86743818 ATCATGAGTAACCGCTTCC 59 86741298 86743733 TTGGTATCTCCTTTGGCAG 59 NA Mus musculus 50 Tk2 ENSMUSG00000035824 ENSMUST00000050211 2 1 1 81 8 106755138 106760681 TGTATAGAAGTGGGAAGATGC 59 106755077 106755095 ACATCAATGTTCCTGACGA 58 NA Mus musculus 50 H2-Q1 ENSMUSG00000035929 ENSMUST00000078205 2 1 3 300 17 35519887 35519906 CTAACATCATCCTGACCTGG 59 35520297 35520316 TGTCTCCTTCTCTTCATCAC 58 NA DesignNoJunction Mus musculus 50 2810432D09Rik ENSMUSG00000036114 ENSMUST00000038434 2 1 1 263 4 41659684 41659702 AAATCCGAAACCTGCTAGG 59 41659439 41659457 GACTAAGCAGTACCCACAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rpl39 ENSMUSG00000036305 ENSMUST00000038613 1 1 1 60 15 102465534 102465552 CTATTCCTCAGTGGATCCG 58 102465574 102465594 CTTCTCTTAGAGTTGTACCTG 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Gadd45a ENSMUSG00000036390 ENSMUST00000043098 3 1 1 189 6 66986828 66986846 TCTGCAGATCCATTTCACC 59 66985752 66986675 TGATGAATGTGGGTTCGTC 59 NA Mus musculus 50 9530077C05Rik ENSMUSG00000036411 ENSMUST00000098931 1 1 2 82 9 22228929 22228947 AGTTCACCCGTGATATCTC 58 22228993 22229013 GTCAGATTGTCGTTTGACC 58 NA Mus musculus 50 Iqce ENSMUSG00000036555 ENSMUST00000041783,ENSMUST00000077890 3 2 2 80 5 141162345 141163748 ACACTATCAACAAACTGCAG 58 141162284 141162304 CTTCGTAGTATGTTTCCATGG 58 NA Mus musculus 50 4932438A13Rik ENSMUSG00000037291 ENSMUST00000039841,ENSMUST00000108145 2 2 2 81 3 36805690 36807057 GCAGAGATGTTAGCATTCC 58 36807102 36807120 CTTCCAATTCACATTGCCA 58 NA Mus musculus 50 Trmt6 ENSMUSG00000037376 ENSMUST00000039554,ENSMUST00000110126 1 2 2 80 2 132633991 132634009 GGAGACAAGAAGAGCAGAG 59 132632725 132633947 CCACAATCAAACCATCTGC 59 NA Mus musculus 50 Tom1 ENSMUSG00000037827 ENSMUST00000036712 1 1 1 60 6 128595882 128595902 CTAGCTACTGACCTGATTGAC 59 128595923 128595942 GAGATGAGAGGTTGTTTGTG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Egr2 ENSMUSG00000037868 ENSMUST00000048289,ENSMUST00000105438 3 2 2 110 10 67001137 67002512 GATGGCATGATCAACATTGAC 59 67002583 67002602 CATGTAAGTGAAGGTCTGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 3110032G18Rik ENSMUSG00000037962 ENSMUST00000036109 1 1 1 155 5 125490746 125490764 CTTCCCTCTTCCAAACTCC 59 125491672 125491691 TCTTGTCTCGGAAGTATCTC 58 NA DesignNoJunction Mus musculus 50 Ptpdc1 ENSMUSG00000038042 ENSMUST00000035824 1 1 1 80 13 48686070 48687867 TATACTCATCCTGGGTCAC 57 48686008 48686026 CGATGATGCGATACTTCTC 57 NA Mus musculus 50 Rnmtl1 ENSMUSG00000038046 ENSMUST00000040577 1 1 1 80 11 76061004 76063402 TTACTCACCAAAGGCTGTG 59 76063445 76063464 AATGGGTACCTGGAAATGTG 59 NA Mus musculus 50 A930037G23Rik ENSMUSG00000038271 ENSMUST00000051171,ENSMUST00000088276 1 2 2 142 6 125099841 125101410 GGCTCATGAGTAATAATCTGAC 58 125101512 125101531 GATCATATCCTCACAGTTGC 58 NA Mus musculus 50 Lasp1 ENSMUSG00000038366 ENSMUST00000043843,ENSMUST00000107572 2 2 4 198 11 97694871 97694889 TGAGGAGTTTGAGAAGAGC 58 97695432 97695450 CTTGTACCCACCATAGGAC 59 NA DesignNoJunction, InUTR Mus musculus 50 Tmco3 ENSMUSG00000038497 ENSMUST00000045229,ENSMUST00000084058 3 2 2 80 8 13292880 13294855 CAATAAATCAGTCAAAGGCG 57 13294898 13294916 GTCATATTCTGCTTGGAGC 58 NA Mus musculus 50 1110054O05Rik ENSMUSG00000038544 ENSMUST00000095063,ENSMUST00000116331 1 2 3 158 4 59788420 59795142 AAATCCTTCAGGACAAGGT 58 59786840 59786858 CGGAAGTCCTTGGTAAGAG 59 NA DesignNoJunction Mus musculus 50 Ucn ENSMUSG00000038676 ENSMUST00000043475 1 1 1 69 5 31440532 31440550 TCATATTCGATTCGGTGGG 59 31440481 31440499 GTAAGGGAAAGGGTCAAGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Wdr26 ENSMUSG00000038733 ENSMUST00000036329,ENSMUST00000111053 3 2 2 80 1 183133206 183133224 CACTTCAAGTTCTACGCTG 58 183129065 183133163 ACATCAGATACCCACTAAGG 58 NA Mus musculus 50 Mtg1 ENSMUSG00000039018 ENSMUST00000036977 2 1 1 89 7 147329708 147330248 CATCAAGCAGATTGTCCCA 59 147330532 147330551 ACCATGATGCAGTATTCTGG 59 NA Mus musculus 50 ENSMUSG00000039098 ENSMUSG00000039098 ENSMUST00000041011 1 1 1 62 10 25798907 25798925 AACAAAGTCAGACCTGGAC 59 25798951 25798969 CAGCTTAAACCCTCTGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Whrn ENSMUSG00000039137 ENSMUST00000102867,ENSMUST00000107393,ENSMUST00000084510,ENSMUST00000063650,ENSMUST00000107391,ENSMUST00000095038,ENSMUST00000107388,ENSMUST00000095037,ENSMUST00000107386 1 9 11 80 4 63080504 63080522 ATTAGACCTGGAAGGAACC 58 63079643 63080462 GATTTGACATCATCCACAGAC 59 NA Mus musculus 50 Whrn ENSMUSG00000039137 ENSMUST00000102867,ENSMUST00000107393,ENSMUST00000084510,ENSMUST00000063650,ENSMUST00000107391,ENSMUST00000095038,ENSMUST00000107388,ENSMUST00000009212,ENSMUST00000063672 3 9 11 110 4 63093776 63093795 CACCATGATGTACTACCTGG 59 63093080 63093703 GACAGGAGTGAGAACTTGG 59 NA Mus musculus 50 Sart1 ENSMUSG00000039148 ENSMUST00000044207 2 1 1 82 19 5381113 5381224 CATCGAGGATAAGATGGCC 59 5381049 5381068 CTTTCTCCTTGAAGTCCTGG 59 NA Mus musculus 50 Hs3st6 ENSMUSG00000039628 ENSMUST00000044922 1 1 1 60 17 24895011 24895029 TACCAAGCTGATTGTGGTG 59 24895052 24895071 CTGTGCATAATCAGAGATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Baat ENSMUSG00000039653 ENSMUST00000043056 1 1 1 80 4 49503281 49512521 TGAGACATCCTAAGGTCCT 58 49503219 49503240 TAGCCATAGAAAGTCCAATCTC 59 NA Mus musculus 50 Myl6b ENSMUSG00000039824 ENSMUST00000026428 1 1 1 112 10 127931719 127932123 TCTTACCACTCTCGGAGAG 59 127931519 127931539 TTAGGATATGCTTCAGGAAGG 58 NA Mus musculus 50 Myd116 ENSMUSG00000040435 ENSMUST00000042105,ENSMUST00000098456 3 2 2 82 7 52779155 52779173 GGCTCAGATTGTTCAAAGC 59 52778675 52779109 TTTCTCAGCGAAGTGTACC 59 NA DesignNoJunction Mus musculus 50 Prdm13 ENSMUSG00000040478 ENSMUST00000095141,ENSMUST00000076206 2 2 2 88 4 21611058 21611076 AGTGGATAGGGTTAATCCG 58 21610677 21611007 ATAGAAGATCTGTCCTCCTG 57 NA Mus musculus 50 Fbxw4 ENSMUSG00000040913 ENSMUST00000046869 2 1 1 98 19 45714987 45715005 AGGCATTCCAGTAAAGGAG 58 45710930 45714927 GGCATCTGACTATATCTCCAC 59 NA Mus musculus 50 BC052484 ENSMUSG00000041062 ENSMUST00000047098 3 1 1 130 17 25881586 25881677 AGCTTACTCAGATTTACCCAC 59 25881769 25881787 CAGGATCATCACTGTGTCC 59 NA Mus musculus 50 8430410K20Rik ENSMUSG00000041124 ENSMUST00000047173 3 1 1 145 9 4384135 4384750 GCCCAGAATTTGAGATTGAG 58 4384858 4384876 CTCATCATAGGTGGGTCTG 58 NA Mus musculus 50 Sntb2 ENSMUSG00000041308 ENSMUST00000047425 1 1 1 80 8 109533801 109533819 AGATGTCTGCTGATGATGG 59 109533863 109535207 AATGCAGGTCCATAGTCAG 59 NA Mus musculus 50 Hsd3b7 ENSMUSG00000042289 ENSMUST00000046863,ENSMUST00000106272 1 2 3 92 7 134945905 134946310 CTATGTTGGCAATGTTGCT 58 134946366 134946384 TAGCAGAAATACACCTGGC 59 NA Mus musculus 50 Plac9 ENSMUSG00000043248 ENSMUST00000052286 2 1 1 155 14 26850016 26850035 CGGTTAGACATTATGGAGGA 58 26847772 26848159 TCAGAAACCATCATCTCCA 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Olfr1031 ENSMUSG00000043267 ENSMUST00000050942 1 1 1 60 2 85832600 85832619 TCCCTGCTCATTATTCTCAC 59 85832641 85832660 AGCTAATCCTCAGAATAGCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Casc1 ENSMUSG00000043541 ENSMUST00000111728,ENSMUST00000111727,ENSMUST00000060797,ENSMUST00000057366 2 4 4 81 6 145131788 145131806 GTACCACCTGGATGTTCTG 59 145130421 145131743 TCCTTCCTGGAGTATCTCC 59 NA Mus musculus 50 Ankrd43 ENSMUSG00000044352 ENSMUST00000104955 1 1 1 164 11 53291894 53291912 TCCTTCAGCAAGTTCTTGG 59 53291748 53291766 TAGCTCCAATGCCATTCAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Klk12 ENSMUSG00000044430 ENSMUST00000107970,ENSMUST00000014063 2 2 2 70 7 51026445 51027348 CTACAAACAAGCCATGGGA 59 51027382 51027400 CTCATTGGAGACAGTGGAG 59 NA DesignNoJunction Mus musculus 50 Gm444 ENSMUSG00000044576 ENSMUST00000058045 2 1 3 93 5 30434848 30434866 CAGTGGACTACAGTGACTG 59 30434923 30439832 TGAATTTGCCTGGGTACTG 59 NA DesignRelaxed Mus musculus 50 Tessp2 ENSMUSG00000044664 ENSMUST00000035715 1 1 1 81 9 110701359 110701669 CATTGTATTTACAGCCGAATCC 59 110701708 110701729 GAATCACCAGACTTGTATTCTG 58 NA Mus musculus 50 Rg9mtd1 ENSMUSG00000044763 ENSMUST00000059052 3 1 1 60 16 56035126 56035146 GACAAAGATGAAGATTCCCTC 58 56035086 56035104 CAAGCAATCTCCACATCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hjurp ENSMUSG00000044783 ENSMUST00000100097 1 1 3 80 1 90173983 90174001 TTAAGGAAAGCAGTAGCCG 59 90162109 90173853 CATAGTTATCCTCAAAGGGCT 59 NA Mus musculus 50 Ubtd2 ENSMUSG00000044949 ENSMUST00000051053 1 1 1 97 11 32399446 32416092 ATAACACTACCACACGGTG 59 32416153 32416171 ATCATGTTGATTGGTGGTG 57 NA DesignNoJunction Mus musculus 50 Olfr123 ENSMUSG00000045202 ENSMUST00000054748 2 1 1 60 17 37932776 37932797 ACTATGTAGCAGTGATGAATCC 59 37932818 37932836 CTGAGCCATGAGATTCCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tas2r119 ENSMUSG00000045267 ENSMUST00000057633 3 1 1 60 15 32107719 32107737 CTCCATTCTGTCATTCCTC 57 32107761 32107779 ACAGATCAGAACAGCTACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Insm2 ENSMUSG00000045440 ENSMUST00000051857 3 1 1 174 12 56700831 56700849 TGTATCCGTTCCAATTCCC 59 56700987 56701005 TTTGATCTTCAGACCCAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 V1rf5 ENSMUSG00000045575 ENSMUST00000056339 3 1 1 60 17 21130893 21130913 CGTTAGCATATTTGTCTCCTG 58 21130853 21130872 GAGAGTTGCTAAGAGTTGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cdc42ep2 ENSMUSG00000045664 ENSMUST00000055458 3 1 1 65 19 5918079 5918097 TTCGATCCTGGATGATGTC 58 5918032 5918050 TATGTAGGAATCTGCACGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 B430212C06Rik ENSMUSG00000046415 ENSMUST00000054227 3 1 1 60 18 67484167 67484186 TTCACTATCACGGACAACAG 59 67484126 67484144 GGCCTAGTTGAGAACTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG666321 ENSMUSG00000046435 ENSMUST00000078695 3 1 1 294 4 143316821 143316839 CTGAAGCTTTGTGATGCAG 59 143317097 143317925 GACTCTCAAAGCACCTGAG 59 NA DesignRelaxed Mus musculus 50 Kif2b ENSMUSG00000046755 ENSMUST00000061019 2 1 1 60 11 91437660 91437678 GTACGATCTGTTGAACTGG 57 91437618 91437636 GACTTGCTGATTTCCATCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lincr ENSMUSG00000047180 ENSMUST00000056946 1 1 1 82 1 36326059 36326077 GAAAGCCATTGAGCTTCTG 59 36323390 36325513 CTGATATGACTTCAGACTCTGG 59 NA Mus musculus 50 BC055004 ENSMUSG00000047592 ENSMUST00000059879 1 1 3 80 5 138685593 138689954 CAAATATAATAGCCTTGCCCTC 58 138689994 138690013 CTTGGTAGTAGAAGCCAGAG 59 NA Nonspecific, InUTR Mus musculus 50 Rpl29 ENSMUSG00000048758 ENSMUST00000059802 3 1 1 112 9 106331932 106331951 GATGACATCCGTGACTACAG 59 106332649 106332667 CTTGATGCCATTTCTGTGC 59 NA DesignNoJunction, InUTR Mus musculus 50 Atp13a5 ENSMUSG00000048939 ENSMUST00000075806,ENSMUST00000115270 3 2 2 80 16 29251508 29261018 ATGGTCAGCTTAACAATGAG 57 29251447 29251466 AGGAGAAAGTAGTTGTCCTG 58 NA Mus musculus 50 Olfr348 ENSMUSG00000049315 ENSMUST00000112950,ENSMUST00000056865 1 2 2 60 2 36642074 36642092 GCATCTGAGTTCATCCTCC 59 36642116 36642134 CATAGTACATGCCTTGCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr23 ENSMUSG00000049929 ENSMUST00000060576 2 1 1 214 X 104116322 104119428 TCTTGGGCACTCAATTGAG 59 104125553 104125574 GTCAATAAATCTTCTGTCACCC 59 NA DesignNoJunction, InUTR Mus musculus 50 EG384813 ENSMUSG00000050190 ENSMUST00000056023 3 1 1 60 8 44710407 44710425 TGGCATTCGTGAATTAAGG 58 44710365 44710383 ACCAGAATCTGATTCTGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sstr5 ENSMUSG00000050824 ENSMUST00000051864 2 1 1 67 17 25629217 25631974 AAGAGATACATGTGCTCTGG 59 25629169 25629187 AGGTGTGGAAGTCAAAGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 BC072620 ENSMUSG00000051067 ENSMUST00000053986 2 1 1 72 10 80297131 80297150 TATTCCTTCCGTAAGGTGGA 59 80297078 80297096 TCTTCATGTTGAACTTGCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr655 ENSMUSG00000051182 ENSMUST00000057385 1 1 1 60 7 111745076 111745094 CGTGATCTTGCTTGTAGTG 58 111745034 111745054 GATGAAGACATACGAGAAACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nhlh1 ENSMUSG00000051251 ENSMUST00000059794 1 1 1 271 1 173984402 173984420 CAACTCCGATACCATGGAG 59 173984149 173984167 CTAGGTTGAAGGCTTCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp579 ENSMUSG00000051550 ENSMUST00000108572,ENSMUST00000040415 3 2 2 70 7 4944759 4944777 GTAAGGAAGAGGGAAGCTG 59 4944707 4944725 AGAAGACGAATGATCCAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rps10 ENSMUSG00000052146 ENSMUST00000114882,ENSMUST00000114881 3 2 3 86 17 27769235 27769253 GAGACACCTACAGAAGGAG 58 27767451 27768162 TAAACTGGAACTCAGTGGC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 BC049349 ENSMUSG00000052446 ENSMUST00000109998 2 1 3 61 8 74489768 74489789 ATTCTCTATGGAGATGTGATGC 59 74489809 74491807 CAATTGGACTCTACAGAAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Magi3 ENSMUSG00000052539 ENSMUST00000098772,ENSMUST00000064371 3 2 2 85 3 103860520 103865562 TACGTTGATCACCTCAACC 59 103860453 103860472 ATTTCAGCCTGTCCTAACTG 59 NA Mus musculus 50 ENSMUSG00000052558 ENSMUSG00000052558 ENSMUST00000064487 1 1 1 60 1 25887830 25887848 GTTCTGGCTTCTTAATGCA 58 25887872 25887890 TTACCCGAACTTCCTACGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cd8b1 ENSMUSG00000053044 ENSMUST00000065248 3 1 1 87 6 71276270 71276288 AGTGACTTCTACTTCTGCG 59 71276339 71279705 TAGGAAGGACATCAACCAC 58 NA Mus musculus 50 Olfr211 ENSMUSG00000053391 ENSMUST00000065786 3 1 1 60 6 116444367 116444385 GTGTGCATGTATTACACCG 58 116444408 116444427 CATTATAGCTGGAGACAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000053568 ENSMUSG00000053568 ENSMUST00000066077 2 1 1 71 11 105805129 105805147 AATGCAGATTGGTCCACTC 59 105805181 105805200 ACTTGAATTCAAGTCCAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 6030452D12Rik ENSMUSG00000054069 ENSMUST00000066875 2 1 1 141 8 109028334 109028352 ACACCAGTACAGAAGATGC 59 109030945 109030965 GCCTTCACATCTCTATTAGTC 57 NA DesignNoJunction Mus musculus 50 Ankrd24 ENSMUSG00000054708 ENSMUST00000011420,ENSMUST00000092277 1 2 2 84 10 81105094 81105112 TAGTTGCTTCCCTACAGGA 59 81105160 81105275 AACTCCTCAAGGATCTGGA 59 NA Mus musculus 50 Phactr1 ENSMUSG00000054728 ENSMUST00000110161,ENSMUST00000095844,ENSMUST00000066928,ENSMUST00000073134 2 4 4 84 13 43229303 43229322 TTCGGAAGGAACTCAATGAG 59 43229369 43230557 TAAGGTCGATGAAACCTGG 58 NA Mus musculus 50 AU018091 ENSMUSG00000054753 ENSMUST00000067969 2 1 1 80 7 3156315 3156336 GTGAATATCTACCTGATGATGC 58 3156099 3156274 GATAGCAAATCCGATCACC 58 NA Mus musculus 50 NM_134096.2 ENSMUSG00000054863 ENSMUST00000068088 1 1 1 139 15 87511933 87511951 GAGATTGTGACCCTAGACC 58 87512054 87550944 TTGATAATTCGAGCGTCCA 59 NA InUTR Mus musculus 50 Atp10b ENSMUSG00000055415 ENSMUST00000077659 3 1 2 80 11 43062481 43067684 ATGAAGACATGGACTGTCC 58 43067725 43067746 GTTGTATATTAGGGAAACCACG 58 NA Mus musculus 50 Tcp10c ENSMUSG00000055602 ENSMUST00000116666,ENSMUST00000086787,ENSMUST00000089096 2 3 3 61 17 13255884 13255902 AAAGCCTGTATAGGCTCAC 59 13255927 13259093 TTTACGTACACTGGCAGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ghr ENSMUSG00000055737 ENSMUST00000069451,ENSMUST00000110698,ENSMUST00000110697 2 3 3 81 15 3290973 3290991 ATACCCTACTGCATCAAGC 59 3283517 3290928 CAGGTTGCACTATTTCGTC 58 NA Mus musculus 50 Fancm ENSMUSG00000055884 ENSMUST00000058889 2 1 1 80 12 66202632 66202650 ACAGTGACCAGGTTAAAGG 59 66202693 66203561 TTGGGTCTTGAATCACTCTG 59 NA Mus musculus 50 Ncoa4 ENSMUSG00000056234 ENSMUST00000111994 3 1 1 83 14 32986112 32986130 GTCCTACTCTTTGAAGCAG 57 32986177 32986598 CTCAGGGATTTGAATGGTC 57 NA Nonspecific Mus musculus 50 Synpr ENSMUSG00000056296 ENSMUST00000070323,ENSMUST00000112656 1 2 2 89 14 14395622 14441094 CCACTCATTGACTTTATCGT 57 14441146 14441164 TTTGACATCAGACAGTCCT 58 NA Mus musculus 50 Olfr1471 ENSMUSG00000056670 ENSMUST00000096203 1 1 1 62 19 13520058 13520076 TTCTTGTTCTGACACCCAC 59 13520102 13520120 ACAACATCCAATGTAGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr173 ENSMUSG00000056679 ENSMUST00000070316 2 1 1 73 X 148802017 148802035 ATACCTTTGCTCACTCACC 59 148782250 148801984 CACTTCCTCTATTCCTATAGCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Ide ENSMUSG00000056999 ENSMUST00000025747,ENSMUST00000087306 1 2 2 82 19 37384373 37386584 GGAAAGTTGCACTATTATCCC 58 37384311 37384329 ATGTCTATCAAGTCGGGTC 58 NA Mus musculus 50 2010309E21Rik ENSMUSG00000057497 ENSMUST00000071492 1 1 1 113 6 86318890 86318908 TCTCTGTCATCCATAGGGA 58 86318985 86319003 CTCATTCGTAAACGTTGCT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Krtap6-3 ENSMUSG00000057855 ENSMUST00000079151 1 1 1 110 16 89084342 89084360 AGGATACTACGGAGGTCTG 59 89084434 89084452 TAACCATAGCCACCATAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sdhc ENSMUSG00000058076 ENSMUST00000111336 2 1 1 135 1 173073781 173075896 GTATCAGAAATGCTGCTCCT 59 173068863 173068881 GACAGTGCCATAGGAAGAG 59 NA Mus musculus 50 EG328280 ENSMUSG00000058246 ENSMUST00000060609 2 1 1 82 13 67943933 67943952 GTTCTTCAGACTCCTGCAG 59 67943997 67944016 TGTATACCATCAGGCATTCC 59 NA Mus musculus 50 Pip ENSMUSG00000058499 ENSMUST00000075351 3 1 1 90 6 41799915 41801446 GTATGGTGATCAAAGCTTACC 58 41801497 41801516 GGATGATCATTACAGAGGCA 59 NA Mus musculus 50 Cds2 ENSMUSG00000058793 ENSMUST00000110158,ENSMUST00000103181,ENSMUST00000089461 3 3 3 135 2 132118994 132119013 AAGCAAAGCTAGATGGAGAG 59 132119111 132120131 CAGTTCTTCCACCTTGAGG 59 NA Mus musculus 50 Olfr814 ENSMUSG00000059134 ENSMUST00000081367 1 1 1 60 10 129311280 129311299 CATTGACCATTTCCTTTGTG 57 129311239 129311257 ACTTGTGTCTGAGCAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sept9 ENSMUSG00000059248 ENSMUST00000093907,ENSMUST00000106351,ENSMUST00000106354,ENSMUST00000019038,ENSMUST00000106352,ENSMUST00000100193,ENSMUST00000106349 1 7 7 82 11 117213988 117214405 CAACAATGAGAACTGCTGG 59 117214451 117214469 TGATGTTGACTTCCTCCTG 58 NA Mus musculus 50 Nrsn2 ENSMUSG00000059361 ENSMUST00000079278 2 1 1 129 2 152199851 152199869 GGTATATCAACCGACCCTG 59 152195568 152195587 TTAACAAGCTCTAGTTTGGG 57 NA DesignNoJunction Mus musculus 50 EG544864 ENSMUSG00000059605 ENSMUST00000077293 2 1 1 98 12 52931085 52931103 CTTCCGTAGTTATTCCCGT 58 52931165 52931183 CTCTAGTGTCACGGTTACG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rcan3 ENSMUSG00000059713 ENSMUST00000030606 2 1 1 60 4 134976161 134976179 GAAGCTTTACTTCGCACAG 59 134974425 134974444 CAGTAAGTAGGACTTGTCCC 59 NA DesignNoJunction Mus musculus 50 Ntng1 ENSMUSG00000059857 ENSMUST00000106571,ENSMUST00000106570 3 2 6 115 3 109675174 109675192 GCAAGAAGAACTACCAGGG 59 109644480 109654687 AAACTTTGGAGGAGTACCG 59 NA Mus musculus 50 EG245174 ENSMUSG00000060336 ENSMUST00000073782,ENSMUST00000109924 3 2 2 90 2 150062809 150063981 TCTAGAAGACATGGAAGGCT 59 150064034 150064052 GGCTCTGATATGCAATGAC 58 NA DesignNoJunction Mus musculus 50 Hnrnpc ENSMUSG00000060373 ENSMUST00000111610,ENSMUST00000075799 2 2 2 99 14 52701480 52701498 GTACCAGAACACCCTTCTC 59 52697222 52700937 CTGGGTAACTGTACATCCTG 59 NA Mus musculus 50 Lrrtm1 ENSMUSG00000060780 ENSMUST00000020400 1 1 1 80 6 77195409 77195430 CATATTCAGGAATCTGAGAGTG 58 77207336 77207354 GTATACGCTGCTTGAGGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Efcab4b ENSMUSG00000061414 ENSMUST00000071563 1 1 1 83 6 127575869 127575889 GATGAAGAAATCCAGCATCTC 58 127575934 127579765 CTCTGTGTCTTTCAGGAGG 59 NA Mus musculus 50 Olfr12 ENSMUSG00000061616 ENSMUST00000081274 1 1 1 60 1 94517335 94517353 TCTACACTCTGGTCATCCC 59 94517377 94517395 ACATCCTTGTTGCGTAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700029P11Rik ENSMUSG00000061633 ENSMUST00000074608 3 1 1 112 15 81811193 81811211 ACACTTCCATGGTTACGAC 59 81811286 81811305 CATAAGCCACAAAGGTAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp13 ENSMUSG00000062012 ENSMUST00000115516 1 1 2 240 17 23718234 23722419 GAGAAATCCCATGAGGTCC 59 23717818 23718030 GAGAAGGAACAACTCCACC 59 NA DesignRelaxed Mus musculus 50 Olfr20 ENSMUSG00000062128 ENSMUST00000116357 3 1 2 118 11 73159289 73167251 AGTTCACAGAATCTGGTGAC 59 73167332 73167350 GGAACAGGGCATAGTACAG 59 NA InUTR Mus musculus 50 Unc13c ENSMUSG00000062151 ENSMUST00000075245,ENSMUST00000093818 3 2 2 80 9 73421908 73426189 CCAGAATATTCCCTGTGGT 58 73421846 73421864 ATGAAGGAACTCCATGGAC 58 NA Mus musculus 50 Zfp398 ENSMUSG00000062519 ENSMUST00000079881 2 1 2 164 6 47790620 47790641 CCAGGTATTAAAGGAGATATCC 57 47809047 47809428 CATGGCATAATCCATGGAG 57 NA Mus musculus 50 Kcnj15 ENSMUSG00000062609 ENSMUST00000113855,ENSMUST00000113856 2 2 9 133 16 95479857 95479877 ACAGTAAGACTGGTTCTTCAC 59 95479972 95480468 TCTTTCTTTCTGCCGAGTG 59 NA InUTR Mus musculus 50 Tex101 ENSMUSG00000062773 ENSMUST00000078001 3 1 1 84 7 25454908 25455359 TAAAGCAGATGGAACCAGG 59 25454842 25454861 ATACTGGATGAAAGTCACCG 59 NA Mus musculus 50 Kcnc3 ENSMUSG00000062785 ENSMUST00000107907,ENSMUST00000107906 1 2 2 115 7 51851617 51851635 GTGATTGAAACCAACAGGG 58 51853826 51853844 TTGTCTTCTGGAGACATGG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Sorcs3 ENSMUSG00000063434 ENSMUST00000078880 3 1 1 80 19 48864721 48868643 CTCTGATTAAAGTGACCAGTG 58 48868685 48868703 AAAGCTCTGCTGAAGTAGG 59 NA Mus musculus 50 B9d2 ENSMUSG00000063439 ENSMUST00000108403 1 1 1 223 7 26468422 26471004 TAAAGGTCTCCAAGGTTGG 58 26471191 26471209 TGTAGATGGTATCTGCGTG 58 NA DesignRelaxed Mus musculus 50 Olfr1410 ENSMUSG00000063583 ENSMUST00000079790 1 1 1 62 1 94505316 94505334 AACAAGGATGTGAAGGACG 59 94505360 94505418 TTTCTCCTTCACCAGACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mapk15 ENSMUSG00000063704 ENSMUST00000089669 1 1 1 84 15 75825524 75825674 TTCTCAAGGAGTTTGGAGG 58 75825721 75825740 ACCAGGTAAATATCCCTGTC 58 NA Mus musculus 50 Ap3s2 ENSMUSG00000063801 ENSMUST00000075657 2 1 1 88 7 87060961 87060979 ACAGCAGATTGTTCGAGAG 59 87060134 87060909 CACCAATCAAACTTCCACC 58 NA Mus musculus 50 mmu-mir-411 ENSMUSG00000065477 ENSMUST00000083543 3 1 1 60 12 110948409 110948429 GTATAGCGTACGCTTTATCTG 58 110948448 110948469 ATTTGATACTGAGGGTTAGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Oog2 ENSMUSG00000066030 ENSMUST00000105758,ENSMUST00000080405 3 2 2 80 4 143785257 143785922 TTATAGAATGTCTCAGGTGCC 59 143785964 143785982 CCAAGTCTGACTGTGAGAG 59 NA Nonspecific Mus musculus 50 Ipo7 ENSMUSG00000066232 ENSMUST00000084731 1 1 1 80 7 117190651 117191650 CACAACATCTGGCAATGAC 59 117191692 117191712 CAGTAACTGCTTTGTCATCAC 59 NA Mus musculus 50 Wdr6 ENSMUSG00000066357 ENSMUST00000068700 1 1 1 101 9 108476321 108476439 GAGACCAGGTACATGTCTC 58 108476238 108476256 CACTGCTCCATCACTACAG 59 NA Mus musculus 50 Flvcr1 ENSMUSG00000066595 ENSMUST00000085635 3 1 1 80 1 192839282 192839303 TCCTACAAGAGTTCTATCTGGA 59 192837297 192839244 TCCAGTCATGATACCATAACTG 59 NA Mus musculus 50 Suds3 ENSMUSG00000066900 ENSMUST00000086471 1 1 1 82 5 117544964 117544985 CATCTACCTGGAATCTAAGGAC 59 117543025 117544921 TCTTCCTCACCCAGATCTC 59 NA Mus musculus 50 Olfr1436 ENSMUSG00000067513 ENSMUST00000087812 1 1 1 60 19 12373122 12373140 GTATCTCAGGTGTTTGCCA 59 12373080 12373098 AATGTCTGATGACGTTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Edg3 ENSMUSG00000067586 ENSMUST00000087978 1 1 1 61 13 51514573 51514591 CATGATCAAGATGAGGCCA 59 51514616 51514634 TCCCAATCAGAAGGAACAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Speer3 ENSMUSG00000067855 ENSMUST00000088625 1 1 1 77 5 13795571 13796302 AACTTCAGGACTCAGAGAC 58 13796343 13796361 GAAACTCATTGTGCAGGAG 58 NA DesignRelaxed Mus musculus 50 Clec16a ENSMUSG00000068663 ENSMUST00000066345,ENSMUST00000115827,ENSMUST00000115828,ENSMUST00000115824,ENSMUST00000038145,ENSMUST00000115823 3 6 6 86 16 10688647 10688665 ATTTACCAGATGAGCCTGG 59 10688715 10691487 CTGCATGTCCTGTAGAAGG 59 NA Nonspecific Mus musculus 50 Myoz1 ENSMUSG00000068697 ENSMUST00000090469 2 1 1 82 14 21470484 21472858 TGACAGCTCAATGGATCAC 59 21470420 21470438 CATATGAGAAGCCCTGACC 59 NA Mus musculus 50 Ssb ENSMUSG00000068882 ENSMUST00000090852,ENSMUST00000090851,ENSMUST00000112260 2 3 3 151 2 69704340 69704553 AAATTCAACAGGCTAAACCG 59 69704667 69704685 TACTCATCCGTCACTTCAG 58 NA Mus musculus 50 Hist4h4 ENSMUSG00000069306 ENSMUST00000104941,ENSMUST00000091747 1 2 2 242 13 21903726 21903744 ATAACATCCAGGGCATCAC 59 21903950 21903968 ATAATTAGCCGCCGAATCC 59 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Mus musculus 50 2610019A05Rik ENSMUSG00000069631 ENSMUST00000103072,ENSMUST00000100324 3 2 5 138 11 106048446 106048464 CACAGTAGGAACCCATGTC 59 106034679 106035001 AACCCTTTGCCTATGATGG 59 NA InUTR Mus musculus 50 Wfdc10 ENSMUSG00000070529 ENSMUST00000109334,ENSMUST00000094344 3 2 2 107 2 164481691 164482573 ATATGAAGCACCAGTTCAC 57 164482643 164482662 ATGTTATTTGCTTGGCAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Top1 ENSMUSG00000070544 ENSMUST00000109468,ENSMUST00000017078 1 2 2 80 2 160531045 160538386 TTCACGAATCAAGGGTGAG 59 160538430 160538448 TTTCGGATCTTGTCCACAC 59 NA Mus musculus 50 Ifnz ENSMUSG00000070908 ENSMUST00000094977 2 1 1 60 4 88453783 88453803 CTAGGGTTTACATAGGGAAGG 58 88453825 88453843 ATTTACAAGGGTGGAGAGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 2510002D24Rik ENSMUSG00000071632 ENSMUST00000055413 1 1 1 164 16 18836863 18836881 TACACCACTACTACGTCCA 59 18839225 18839243 ATACCAAGGTGTGCTTCTG 59 NA DesignNoJunction Mus musculus 50 OTTMUSG00000019001 ENSMUSG00000072930 ENSMUST00000112796 2 1 1 60 X 144638035 144650929 CCAGAAATTGACAGATCGT 57 144650950 144650971 GTTCCTGTACCCATAAATAGTC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 6030469F06Rik ENSMUSG00000073142 ENSMUST00000101508 1 1 1 60 12 31869504 31869522 AAACAAGCATTCTCCAGAC 57 31869546 31869564 TGGAGTTCAAGTTGCTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Vmn2r111 ENSMUSG00000073445 ENSMUST00000092491 2 1 1 61 17 22696130 22705820 AAAGGAAGTACACAGGTGC 59 22696087 22696105 TTTCTAGATCCAGGACCAC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000073610 ENSMUSG00000073610 ENSMUST00000097634 2 1 1 65 18 33630504 33630524 ACAAGACAAAGAGATGTCCAG 59 33632084 33632102 CTATGGAAACTGGAGGTGG 59 NA DesignNoJunction Mus musculus 50 Rpl27 ENSMUSG00000073640 ENSMUST00000097682 1 1 1 61 18 6332855 6332873 AACTACAACCACCTCATGC 59 6332898 6332916 ACAACAGTCTTGTCCAAGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073789 ENSMUSG00000073789 ENSMUST00000097954 2 1 1 60 4 100693177 100693195 TGGACACATATGGTGTTCC 59 100693135 100693153 GTGACCAGGAAATACTGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 B430319F04Rik ENSMUSG00000073866 ENSMUST00000098108 1 1 1 97 7 117911993 117912011 CTACCACCAATCTAGCTGC 59 117911914 117911932 CATGCCTCTAGAATCTCGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074080 ENSMUSG00000074080 ENSMUST00000098392 1 1 1 60 7 72887142 72887161 AGACTTCCCAAGACTATCAG 58 72887101 72887119 GAACAGAATAGACCCACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074204 ENSMUSG00000074204 ENSMUST00000098575 3 1 1 60 9 72233240 72233259 TAACCCTCAGTGTTATTCCC 58 72233199 72233218 ACATCAGTAAGAACGTCCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG229571 ENSMUSG00000074432 ENSMUST00000098885 1 1 1 299 3 92877494 92877844 CAGAAATTGTGCTACAGCC 59 92878107 92878125 CGGTTTGTTAGTCTCACCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG624866 ENSMUSG00000074579 ENSMUST00000099075 3 1 1 90 3 65488094 65488112 GTACATGCCTGAAATTCCA 57 65488165 65488184 GCACAGCAAAGGATATAGAG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 OTTMUSG00000015743 ENSMUSG00000074731 ENSMUST00000109914 2 1 1 60 2 150300522 150300541 TCTCTACAGAGATGTGATGC 58 150300282 150300500 CCAAACATAGCCTATAGCAG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Sel1l2 ENSMUSG00000074764 ENSMUST00000099303 2 1 1 80 2 140071126 140071146 ATTATCTAGCCGAGATGTACG 58 140069986 140071085 AGACACCTTTGTAAAGCTCC 59 NA Mus musculus 50 Qser1 ENSMUSG00000074994 ENSMUST00000099655 2 1 1 84 2 104620148 104620166 GAAAGTGGAGGTGAAGGTC 59 104618401 104620103 TTAAAGCCTCCTTAAAGGTCTC 59 NA InUTR Mus musculus 50 Olfr1089 ENSMUSG00000075173 ENSMUST00000099876 3 1 1 60 2 86573660 86573680 CTGTTCCTCATCATCTATCTG 57 86573620 86573638 TTGTGAGTATGATCATGCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Krt76 ENSMUSG00000075402 ENSMUST00000100179 2 1 1 90 15 101717785 101717803 GCTCATGAATGTCAAGCTG 59 101716165 101717731 AAACTCTCCAGACAACCTG 59 NA Mus musculus 50 I830127L07Rik ENSMUSG00000075601 ENSMUST00000100541 2 1 1 60 15 74964146 74964164 TTCCCTGATGGATTCTGTG 58 74962308 74964122 TCCTTCTTTGAGAGTCCAC 58 NA DesignRelaxed Mus musculus 50 TRBV21 ENSMUSG00000076477 ENSMUST00000103278 3 1 1 61 6 41152619 41152754 TATTCTGGACATCAATCCATGG 59 41152775 41152794 CCTTTGACCAGATGTCTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-15 ENSMUSG00000076693 ENSMUST00000103502 2 1 1 65 12 115895683 115895701 CCTGAAACTGGTGGTACTG 59 115895636 115895655 TTTGTCTGCAGTCAGTATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zdhhc17 ENSMUSG00000078108 ENSMUST00000104906 1 1 1 60 10 110379173 110379192 GATAAATCCAGTTCTCAGGC 58 110379132 110379150 AACTGACAGTGAGAACTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 mt-Atp6 ENSMUSG00000078295 ENSMUST00000105091 1 1 1 60 1 24621391 24621410 TTCAATCCTATTCCCATCCT 57 24621350 24621369 GTGTTGGAAAGAATGGAGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Cyp2b13 ENSMUSG00000078788 ENSMUST00000108392 2 1 1 70 7 26771330 26772986 ATGTTGCAGAGAAAGTCCA 59 26773020 26773038 ATCATCAAGGGTTGGTAGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 A2ARL5_MOUSE ENSMUSG00000078875 ENSMUST00000108976,ENSMUST00000108975 1 2 2 80 2 176794447 176794466 ATCCTTCTCAGAAGAGTCTC 57 176794506 176794733 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 Flrt3 ENSMUSG00000079021 ENSMUST00000099301 2 1 1 80 2 140476919 140482675 GCAACTTAGAAGGAGTGGA 58 140476857 140476875 TGTCACGGAAGTTAATCCA 58 NA InUTR Mus musculus 50 A2AKI2_MOUSE ENSMUSG00000079107 ENSMUST00000110705 1 1 1 80 2 120457214 120459913 ATCAGGAATGTAAAGGTGGA 58 120459956 120459974 GTAATCAAAGCCAAATGCC 57 NA Mus musculus 50 Drr1 ENSMUSG00000079143 ENSMUST00000110823 2 1 1 141 12 33881043 33894361 GGATCCCTTAGAGCTTTCTG 59 33880315 33880333 GTTCTCCAGACGTTAGGAG 59 NA InUTR Mus musculus 50 Drr1 ENSMUSG00000079143 ENSMUST00000110823 3 1 1 159 12 33881042 33894359 ATCCCTTAGAGCTTTCTGC 59 33880295 33880313 TCATCACTCCATAACAGCG 59 NA InUTR Mus musculus 50 NP_001078983.1 ENSMUSG00000079502 ENSMUST00000113843 3 1 1 70 2 28907773 28910344 TCATCGTCAAGAGACACTG 59 28907721 28907740 ACAGTCTGGTAAATTCCACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 H2-Q1 ENSMUSG00000079507 ENSMUST00000074806 3 1 3 82 17 35482202 35482399 AAAGAGGGAGAAACACAGG 59 35482617 35482636 AGAGATATCAGAGCTCTGGG 59 NA DesignNoJunction Mus musculus 50 Maea ENSMUSG00000079562 ENSMUST00000114449 3 1 1 80 5 33714445 33714922 TCTATGGCTACAATTCTCTGC 59 33714962 33714982 AGAAGTGGAAGACTTCTTTGG 59 NA Mus musculus 50 Ott ENSMUSG00000079843 ENSMUST00000112757,ENSMUST00000101183 1 2 2 80 X 145722009 145731222 AAATTGACAGATCGTCTGCA 59 145731262 145731283 GTTCAACTGTCTCATTTCTTCG 59 NA Nonspecific Mus musculus 50 Fert2 ENSMUSG00000000127 ENSMUST00000038080 1 1 4 92 17 64306655 64322423 CTGAGATACAAGGAAAGAAAGG 58 64322476 64322494 GAGTACCGACTTTGGAGAC 59 NA Mus musculus 50 Sec24b ENSMUSG00000001052 ENSMUST00000001079 1 1 2 131 3 129736853 129736871 CAAGCTCCGTAGTATCCAC 59 129723552 129736758 ACTGCATGCCTTTAGTCTG 59 NA Mus musculus 50 Lsr ENSMUSG00000001247 ENSMUST00000108115,ENSMUST00000001279 2 2 4 143 7 31751043 31751061 GTATTACTGCTCCGTGGTC 59 31747251 31747835 ACAAAGAGCCAATCTTCCA 59 NA Mus musculus 50 Scin ENSMUSG00000002565 ENSMUST00000078481 3 1 2 143 12 40799997 40800016 TGTTCAAAGACAAACCACTC 58 40789861 40799891 CCGGAACTTCTTCAATCTC 57 NA Mus musculus 50 Homer3 ENSMUSG00000003573 ENSMUST00000110124,ENSMUST00000110123 1 2 4 150 8 72815037 72815055 CAGAGGCTGAACTCTTGAG 59 72815323 72815429 AAAGTCTGGATCTCCTGGT 59 NA Mus musculus 50 Akt2 ENSMUSG00000004056 ENSMUST00000108344,ENSMUST00000108343,ENSMUST00000051356 1 3 3 85 7 28403262 28403280 AACACCTTTGTCATACGCT 59 28403329 28413864 CACTCTTCCCTCTCATCTG 58 NA Nonspecific Mus musculus 50 Ctse ENSMUSG00000004552 ENSMUST00000073350,ENSMUST00000116536 3 2 2 81 1 133568915 133569032 ATGGAGAATATGCAGTGGA 58 133569077 133569095 AGGGTATATGAAACCTCGT 57 NA Mus musculus 50 Cd33 ENSMUSG00000004609 ENSMUST00000004728 1 1 2 80 7 50784375 50784857 ATGTTCCATACACAGGCTC 59 50784313 50784331 TGAGTCCTTCTGTAAGGGT 59 NA Mus musculus 50 Prg4 ENSMUSG00000006014 ENSMUST00000006171,ENSMUST00000111902,ENSMUST00000111901 2 3 3 81 1 152300641 152300659 TTATGCAATGGTAAGCCAG 57 152299475 152300597 TCCAGAAATAATGACCTCGA 58 NA Mus musculus 50 Hipk1 ENSMUSG00000008730 ENSMUST00000106838 3 1 3 163 3 103562465 103562483 TATAGTATGCCCACCTGCT 59 103558235 103560554 TTGTAGTCCAGGGATTGTG 58 NA Mus musculus 50 A230106M20Rik ENSMUSG00000013367 ENSMUST00000107974,ENSMUST00000013511 2 2 2 123 7 50732025 50732215 GGTCACAGTGAATTATCCC 57 50731920 50731939 CTTGTACCACTGGAAATCTG 58 NA Mus musculus 50 Cad ENSMUSG00000013629 ENSMUST00000013773,ENSMUST00000114646 3 2 3 87 5 31364261 31364279 AGCTATCAAGGTCACTCAG 58 31364328 31364582 GATGTAATACTGCTCAGACTC 57 NA Mus musculus 50 Bicc1 ENSMUSG00000014329 ENSMUST00000014473 2 1 4 80 10 70393391 70393410 CAGATCAGGATCTGAAGGAG 58 70388118 70393349 TACTTAGCTCTGAGATTGCC 58 NA Mus musculus 50 Adam28 ENSMUSG00000014725 ENSMUST00000111072,ENSMUST00000022642 1 2 3 80 14 69229057 69235760 CCACAGTCTTCCACTTCTC 59 69228995 69229014 GGATCACTATAGCAACCACC 59 NA Mus musculus 50 Npdc1 ENSMUSG00000015094 ENSMUST00000114282 3 1 3 106 2 25263442 25263461 CCCATACTTCCTTGAGTTCC 59 25263530 25263617 CAATATGGAGGAGCCAAGG 59 NA Mus musculus 50 Setdb1 ENSMUSG00000015697 ENSMUST00000107170 1 1 3 100 3 95144157 95144175 ATCCAGTTTAAGCCCATGG 59 95143976 95144095 CTTTCTAAGTCAGTGTCAGCT 59 NA Mus musculus 50 Il17rb ENSMUSG00000015966 ENSMUST00000016110 3 1 2 80 14 30813977 30813995 CCCTTGGAAACAGATACAC 57 30813574 30813934 TCATCAGTTTATTCTCCAGC 57 NA Mus musculus 50 Chdh ENSMUSG00000015970 ENSMUST00000067620,ENSMUST00000022556 3 2 2 135 14 30849091 30849668 GTCAACAGAAACCGATGTC 58 30849765 30849785 TATCTCTTTGTCTGACTGGAC 58 NA Mus musculus 50 Col20a1 ENSMUSG00000016356 ENSMUST00000108856,ENSMUST00000108855,ENSMUST00000080705,ENSMUST00000076420,ENSMUST00000108854,ENSMUST00000108852,ENSMUST00000094213 3 7 7 98 2 180741852 180741870 ACTTCAACCATGATTCCCG 59 180741929 180742281 CTATATGTACCTTGTGGAAGCT 59 NA Mus musculus 50 Cadps2 ENSMUSG00000017978 ENSMUST00000115358,ENSMUST00000018122,ENSMUST00000115362 1 3 8 80 6 23332910 23332929 GCTGCCTTGATCAATTACAC 59 23305917 23331065 GTTCATGGTCTCTGTTTCCT 59 NA Mus musculus 50 1700081L11Rik ENSMUSG00000018412 ENSMUST00000106977,ENSMUST00000018556,ENSMUST00000106972,ENSMUST00000106971,ENSMUST00000106974 2 5 7 89 11 104211859 104211877 ACACTATGAAGCACCTCTC 58 104204975 104211806 CTTGTGGGAACATCATCTG 58 NA Mus musculus 50 2810408A11Rik ENSMUSG00000018570 ENSMUST00000100969,ENSMUST00000018714 3 2 4 129 11 69711805 69711824 CAAAGGAAGGTATCTGAGGT 58 69710984 69711612 CAAGCTTTCATCTGGAGTG 58 NA Mus musculus 50 Rad51l3 ENSMUSG00000018841 ENSMUST00000018985,ENSMUST00000092844,ENSMUST00000100718 1 3 4 80 11 82696434 82696453 GTTCATTTGACATCTTCCGG 59 82695348 82696391 CTGAAGAAGTTGCTTCCTG 58 NA InUTR Mus musculus 50 Syne1 ENSMUSG00000019769 ENSMUST00000116266 2 1 5 158 10 4922192 4922210 CAGTCTCTATCCAGCAGTG 59 4922331 4925977 TATTCCCATCTGCCTTACTG 58 NA Mus musculus 50 Epb4.1l2 ENSMUSG00000019978 ENSMUST00000053748,ENSMUST00000092645,ENSMUST00000092644,ENSMUST00000061084,ENSMUST00000068469,ENSMUST00000020151 1 6 8 87 10 25226072 25227593 TCACCAAGACTGTGAAAGG 59 25227644 25227662 TGATCATGATCCAGAGCTG 58 NA Mus musculus 50 Myb ENSMUSG00000019982 ENSMUST00000020158 3 1 2 147 10 20862881 20865992 TTTCTTGAACACTTCCAGC 58 20861877 20862771 AGCTGGAGTTCTAAAGATGG 59 NA Mus musculus 50 Unc5b ENSMUSG00000020099 ENSMUST00000077925,ENSMUST00000105458 1 2 2 93 10 60231917 60231935 ACAGTTACCACAACCTACG 59 60231223 60231860 TAGAAGGGAATCTCCTGGT 58 NA Mus musculus 50 Usp15 ENSMUSG00000020124 ENSMUST00000105259 2 1 3 93 10 122583991 122600663 TCCCTCTACTCCTAATGTG 57 122583916 122583935 ATTGTTTCTTCCAGGTTCTG 58 NA Mus musculus 50 Hnrpab ENSMUSG00000020358 ENSMUST00000109103 2 1 3 191 11 51416116 51416134 AGAGGAAATCGCAATCGAG 59 51414970 51415259 ACTACCCTGACTGTAGTCG 59 NA Mus musculus 50 Smek2 ENSMUSG00000020463 ENSMUST00000020755,ENSMUST00000101439,ENSMUST00000101438 1 3 4 84 11 29109418 29109436 TTGGATAATGGAACTCGGT 58 29109482 29111131 GAGACTTGATATCTTCCACTC 57 NA InUTR Mus musculus 50 Smek2 ENSMUSG00000020463 ENSMUST00000020755,ENSMUST00000101439,ENSMUST00000101438 3 3 4 85 11 29109418 29109436 TTGGATAATGGAACTCGGT 58 29109482 29111132 AGAGACTTGATATCTTCCACTC 58 NA InUTR Mus musculus 50 Dbnl ENSMUSG00000020476 ENSMUST00000109845,ENSMUST00000020769,ENSMUST00000102928 1 3 3 134 11 5695550 5695568 CATAAGGAAAGCACCTCCT 58 5696816 5697035 TTCTTCCTTCTCAGCTTTGG 59 NA Mus musculus 50 OTTMUSG00000001265 ENSMUSG00000020486 ENSMUST00000107960 3 1 9 85 11 87403250 87403268 CACTACGAGAACTACAGGG 58 87403317 87403525 TTTCTGGATCTGTCCTTGC 59 NA Nonspecific Mus musculus 50 X83328 ENSMUSG00000020610 ENSMUST00000020929 3 1 3 191 11 109295895 109295913 CTTTAACCCATGAGATCGG 57 109296067 109313091 GCCTTTCTTCATTCATTCTG 57 NA Mus musculus 50 Tlk2 ENSMUSG00000020694 ENSMUST00000106939,ENSMUST00000106936,ENSMUST00000106941,ENSMUST00000015107 2 4 6 108 11 105140532 105142410 AAGCAAAGGCATTTATCAGG 58 105142481 105142499 ACTGACTTTCGGATGTGAG 59 NA Mus musculus 50 Itgb4 ENSMUSG00000020758 ENSMUST00000021107 1 1 5 80 11 115850318 115851040 GACGAGCTTAAGAAAGAAGAG 58 115851082 115851100 CACGTTGTAGCTGTAAGTG 58 NA Mus musculus 50 Camkk1 ENSMUSG00000020785 ENSMUST00000102539 2 1 2 80 11 72851058 72851076 CCTCAAAGACCTGATCCTG 59 72851117 72851924 TTGACCAGGATCTTGATATCTG 59 NA Mus musculus 50 Aanat ENSMUSG00000020804 ENSMUST00000021159 2 1 2 109 11 116457082 116457100 CAGTGCGTTTGAGATTGAG 59 116457427 116457446 ATAAAGGCTGTAGCAGAAGG 59 NA DesignNoJunction Mus musculus 50 Mink1 ENSMUSG00000020827 ENSMUST00000079244 3 1 5 156 11 70417296 70417314 ACACGTGTCTCATCAAGAC 59 70417434 70417701 TCATACTCTGTCTCCTCCC 59 NA Mus musculus 50 Mink1 ENSMUSG00000020827 ENSMUST00000072237 1 1 5 89 11 70423146 70423164 GAAAGCAGTGAAGAGGAGG 59 70423217 70423598 GTCTGTATCACCATCACGG 59 NA Mus musculus 50 Higd1b ENSMUSG00000020928 ENSMUST00000107073,ENSMUST00000107072 3 2 3 96 11 102698067 102698556 GTGCCTATAGGTGTAGCAG 59 102698615 102698634 GAATCAGATGGATGGAGAGC 59 NA Mus musculus 50 Scfd1 ENSMUSG00000020952 ENSMUST00000021335,ENSMUST00000110735,ENSMUST00000085415 3 3 4 81 12 52485148 52488042 GAACCAGTATGGAAGGTACTC 59 52488084 52488103 CTCTCAGTTCCTTCACAGAC 59 NA Mus musculus 50 1810020G14Rik ENSMUSG00000021139 ENSMUST00000110339,ENSMUST00000056161,ENSMUST00000019829 3 3 5 113 12 82611896 82611914 TATGTCTCCAACGACAGTG 59 82605612 82611819 ATCTTGGCCATTTACCGAG 59 NA Mus musculus 50 Pcnx ENSMUSG00000021140 ENSMUST00000095565 1 1 3 80 12 83020300 83020318 CTCCAGGAATAGTTTGCCA 59 83020362 83047930 GACGAGAACTTACCTCCAG 59 NA Mus musculus 50 Zmynd11 ENSMUSG00000021156 ENSMUST00000110636,ENSMUST00000110634,ENSMUST00000021584 2 3 5 60 13 9709425 9709443 TGAGTTCAGGCTTAGAGAC 58 9697943 9709402 CTTAATGCTCCTGCAAACTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Cenpp ENSMUSG00000021391 ENSMUST00000021823 3 1 2 83 13 49655676 49722634 AGCATTTCAAGACCCACTC 59 49655611 49655630 TTGTTTGGTCATGTTTGGTG 59 NA Mus musculus 50 Auh ENSMUSG00000021460 ENSMUST00000110031 2 1 2 60 13 53014375 53014393 AAGTCCCTGGGATATTCTG 58 53008394 53008412 AAACAAAGCTGGATGTCAG 58 NA DesignNoJunction Mus musculus 50 Caml ENSMUSG00000021501 ENSMUST00000021963 2 1 1 75 13 55729950 55729968 CCATTTCTCACTTTGCAGC 59 55733173 55733191 TCGTCTTCACCTTCTTCTC 58 NA DesignNoJunction Mus musculus 50 Golm1 ENSMUSG00000021556 ENSMUST00000095739,ENSMUST00000022039 1 2 2 80 13 59743651 59743670 AGAAACAAGTCCCAGATTCC 59 59741689 59743610 CTCATTGGTTTCCTCATTCTG 58 NA Mus musculus 50 Pde4d ENSMUSG00000021699 ENSMUST00000074103 2 1 2 80 13 110725622 110725643 GCCTAACTAATTCATGTATCCC 58 110725682 110726900 TCACATCTTCTAGTTCCTTGG 59 NA Mus musculus 50 Acin1 ENSMUSG00000022185 ENSMUST00000111485 1 1 5 86 14 55285988 55298085 ACTTGAAGGAAAGAGCTCC 59 55285920 55285938 CTGGATGATCGTCTTTCCC 59 NA Mus musculus 50 Depdc6 ENSMUSG00000022419 ENSMUST00000096433,ENSMUST00000100660,ENSMUST00000023056 2 3 3 128 15 55043873 55047052 CCAAATCTGTGCTGAAGAG 58 55049754 55049772 GTTTACTTCCTCGTACCAC 57 NA Mus musculus 50 Nudt16l1 ENSMUSG00000022516 ENSMUST00000050881,ENSMUST00000115846 2 2 2 116 16 4939572 4939590 GCTGACATTGGAACAACTG 59 4940227 4940245 CCTACTCGATCCTTCTGTG 58 NA DesignNoJunction Mus musculus 50 Plec1 ENSMUSG00000022565 ENSMUST00000089610,ENSMUST00000074834,ENSMUST00000071869,ENSMUST00000076355,ENSMUST00000080857,ENSMUST00000073418,ENSMUST00000076442,ENSMUST00000054449,ENSMUST00000072692,ENSMUST00000023226 3 10 10 82 15 76023704 76023723 AAATGATGACATTGCTGACG 59 76022768 76023659 TGTCTGAGATCTGGAAGTG 58 NA Mus musculus 50 Pvrl3 ENSMUSG00000022656 ENSMUST00000023334 3 1 3 80 16 46449069 46454744 CATTTCAGATCCTCCTACCAC 59 46449009 46449027 GCTATATCCTGGACGTCAG 59 NA Mus musculus 50 Eaf2 ENSMUSG00000022838 ENSMUST00000075946,ENSMUST00000114829,ENSMUST00000114825 3 3 3 93 16 36808159 36808178 GGACTTCCAATCTTGTACAG 57 36800915 36808103 GCTTCTGCTTTCAGTTCTC 58 NA Mus musculus 50 Runx1 ENSMUSG00000022952 ENSMUST00000023673,ENSMUST00000046015,ENSMUST00000113956,ENSMUST00000113957 3 4 4 75 16 92689243 92689261 GAGATTCAACGACCTCAGG 59 92669023 92669041 TGTAAAGACGGTGATGGTC 59 NA DesignNoJunction Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000114002,ENSMUST00000064797,ENSMUST00000116575 2 3 16 82 16 91899851 91899869 AGAGAAGGAGAACTCAGAC 57 91899915 91905547 AATTGAACACCAGTTGCTC 58 NA Mus musculus 50 Larp4 ENSMUSG00000023025 ENSMUST00000100206,ENSMUST00000023766,ENSMUST00000057632 3 3 3 155 15 99816613 99817841 ATGATGTTTCTGGAGAAAGC 58 99820773 99820791 TCCATATTGGGACGAACTG 59 NA Mus musculus 50 Ube2j2 ENSMUSG00000023286 ENSMUST00000024056,ENSMUST00000105583,ENSMUST00000105581,ENSMUST00000105582 3 4 5 80 4 155320519 155323129 CCAGAAAGATGAGCAATAACAG 59 155323169 155323188 TAATTCGAAGGTAGTCCTGC 59 NA Nonspecific Mus musculus 50 1700019H03Rik ENSMUSG00000023393 ENSMUST00000094218,ENSMUST00000078837 2 2 3 84 2 180470606 180470625 GTCTTCTACTTCTCAGGTGG 59 180470672 180471403 CCAGGACAAGGTCTTTCTC 59 NA Mus musculus 50 Tulp2 ENSMUSG00000023467 ENSMUST00000107762,ENSMUST00000024233 3 2 5 81 7 52769565 52770034 GAAGAAAGAGACCCTGGAG 58 52770788 52770808 CTTCTTCTCAAATAGCTGTCG 58 NA Nonspecific Mus musculus 50 Pde10a ENSMUSG00000023868 ENSMUST00000115715,ENSMUST00000115724,ENSMUST00000089085,ENSMUST00000115720,ENSMUST00000024647,ENSMUST00000115718 3 6 7 101 17 9091800 9091818 GTTAGTGCAGAGACTGTGG 59 9113394 9121974 CATATTCGTATCCTGGTACCTG 59 NA Mus musculus 50 Vegfa ENSMUSG00000023951 ENSMUST00000071648,ENSMUST00000074629,ENSMUST00000024747,ENSMUST00000113520,ENSMUST00000113519 3 5 6 86 17 46161443 46161461 GATCAAACCTCACCAAAGC 59 46161026 46161395 GTTCTGTCTTTCTTTGGTCTG 59 NA Mus musculus 50 Abca3 ENSMUSG00000024130 ENSMUST00000039013,ENSMUST00000079594 2 2 2 80 17 24537507 24537526 TGACCATATTCAACATCCTG 57 24537569 24537753 CTTCTAACTTCACAGCTGG 57 NA Mus musculus 50 Lama3 ENSMUSG00000024421 ENSMUST00000092070 3 1 2 80 18 12612377 12615230 TCAGTCCAGAATGAAGTAAGG 59 12615271 12615290 GATGTATCTCAGAACGATGC 58 NA Mus musculus 50 Cd74 ENSMUSG00000024610 ENSMUST00000097563 1 1 2 96 18 60970065 60970960 ACCTAAAGTACTGACCAAGTG 59 60971018 60971036 ATAGTTACCGTTCTCGTCG 58 NA Mus musculus 50 Tmem2 ENSMUSG00000024754 ENSMUST00000096194,ENSMUST00000025663 1 2 2 80 19 21867406 21867424 CAGCTTCTCGTTCTTTGTG 59 21867465 21871832 TGATCTGGACAATTCTCATCTG 59 NA Mus musculus 50 Vti1a ENSMUSG00000024983 ENSMUST00000070075,ENSMUST00000095950 1 2 4 117 19 55573027 55573045 AACCTGAGTCATGACAGAG 58 55573787 55698317 TCTGGATGATTCTTCGCAG 59 NA Mus musculus 50 R3hdm2 ENSMUSG00000025404 ENSMUST00000077046,ENSMUST00000105251 3 2 5 122 10 126918840 126921040 AGTACAACATGGCAGAAGAC 59 126921125 126921143 GATGCTGGGAGATAAGTGG 59 NA Mus musculus 50 Paox ENSMUSG00000025464 ENSMUST00000026537,ENSMUST00000097967 3 2 2 82 7 147317590 147317610 AGTTTATGGAGACTCTGTCAG 58 147317654 147318293 CAATTGTGGGTTTCCTGTC 58 NA Nonspecific Mus musculus 50 Cnksr2 ENSMUSG00000025658 ENSMUST00000026750,ENSMUST00000112513 1 2 3 81 X 154357727 154357745 CTCAGAGCATGCTTACCTC 59 154348169 154357683 CTAGGTATAAGAGGCTGCAG 59 NA Mus musculus 50 Zdhhc3 ENSMUSG00000025786 ENSMUST00000026892 2 1 2 63 9 122998186 122998204 TGTACAAGTGTCCCAAGTG 59 122993420 122998159 TTACAAACACTGCAGTGGT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Myo5b ENSMUSG00000025885 ENSMUST00000074157,ENSMUST00000114883 1 2 2 121 18 74904415 74918688 GCCTATGATAGTTTCTGCC 57 74918773 74918791 CCAGGCAATACGAATTCTC 58 NA Mus musculus 50 4921533L14Rik ENSMUSG00000026153 ENSMUST00000027337 1 1 2 117 1 24033537 24033555 TACAGTGATGTTCCTCTGC 58 24031704 24033457 CACTGTTTCCATCTAGACCA 59 NA Mus musculus 50 Htr4 ENSMUSG00000026322 ENSMUST00000115215 2 1 3 96 18 62597591 62656089 CACCCATGTACTAAGGTATACAG 59 62656145 62656163 GCATGATTCCAGAGACTCC 59 NA Mus musculus 50 Steap3 ENSMUSG00000026389 ENSMUST00000112641,ENSMUST00000112639 3 2 5 266 1 122166576 122166594 GGTTCCTTTCTCAGAAACC 57 122140613 122140631 GTCACTTGAGCTAAGGAGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Srgap2 ENSMUSG00000026425 ENSMUST00000032395 1 1 3 80 1 133191097 133191535 TCTACAATCACAAGGAGCG 59 133189339 133189357 GAGTCAGTCAGAGAACTGC 59 NA Mus musculus 50 Xpr1 ENSMUSG00000026469 ENSMUST00000027741,ENSMUST00000111774 3 2 4 149 1 157154941 157156094 AAATGATCCACAAGAACCAG 58 157154811 157154830 CCAGCATTTACTAGATGAGG 57 NA Mus musculus 50 Fcgr2b ENSMUSG00000026656 ENSMUST00000097469 1 1 3 80 1 172891353 172893547 GGAAGTAGACAATCCTCCTG 59 172891197 172891215 TGCTTGAGAAGTGAGTAGG 58 NA Mus musculus 50 Uap1 ENSMUSG00000026670 ENSMUST00000111351,ENSMUST00000027981 3 2 3 152 1 172079470 172079488 TTTGATGTCCCTTCACCAC 59 172073580 172078131 TTGGCATCTTTCAAGTTGTG 59 NA Mus musculus 50 Pmpca ENSMUSG00000026926 ENSMUST00000076431 3 1 2 126 2 26248856 26248875 CTATGAAGATACAGGCCTCC 59 26249094 26250556 CTCTAGCTCCACCAAATCC 59 NA Mus musculus 50 Mdk ENSMUSG00000027239 ENSMUST00000111309,ENSMUST00000028672,ENSMUST00000069423,ENSMUST00000090602 3 4 5 162 2 91771107 91771125 TACAAGTTTGAGAGCTGGG 59 91770261 91770981 TTCCTTTCTTGGCTTTGGT 59 NA Nonspecific Mus musculus 50 Arhgap1 ENSMUSG00000027247 ENSMUST00000111329,ENSMUST00000111331,ENSMUST00000070873,ENSMUST00000090614,ENSMUST00000111330 1 5 5 122 2 91510715 91510875 TTCCTGGTGCAGATATCTG 58 91510961 91510979 ATTGATAGCCTTGAGGGTG 59 NA Mus musculus 50 2310046K01Rik ENSMUSG00000027463 ENSMUST00000073228,ENSMUST00000109861 1 2 4 153 2 151830273 151830291 CACCTTCTTCATAGGCGAG 59 151830408 151831279 GCTAAGGTTTCCCTGAGTG 59 NA Mus musculus 50 Gnas ENSMUSG00000027523 ENSMUST00000109096,ENSMUST00000069396,ENSMUST00000080493,ENSMUST00000109088,ENSMUST00000109089,ENSMUST00000087871,ENSMUST00000109087 3 7 14 126 2 174159768 174162249 TAATGGGTTTAACGGAGAGG 59 174167199 174167319 CACAATGGTTTCAATGGCC 59 NA Mus musculus 50 Ppm1l ENSMUSG00000027784 ENSMUST00000029355,ENSMUST00000068481 1 2 2 60 3 69301848 69301867 AGTCTCCTATGATGAAGCAG 58 69353266 69353288 GAGGTCTTTATCTGAGAGTAGAG 58 NA DesignNoJunction Mus musculus 50 Tsc22d2 ENSMUSG00000027806 ENSMUST00000099090,ENSMUST00000029383 2 2 2 83 3 58221516 58221535 GTTGATGGTGATGAAGACAG 58 58263298 58263941 TTTCACCAGATCCATTGCT 59 NA Mus musculus 50 Ndst3 ENSMUSG00000027977 ENSMUST00000106420,ENSMUST00000029602,ENSMUST00000106419,ENSMUST00000106418 3 4 4 93 3 123255590 123259720 GGGATTGATTGGTACATGGA 59 123255516 123255537 CCTCTGAATGGAAGTAATTAGC 58 NA Mus musculus 50 Ndst3 ENSMUSG00000027977 ENSMUST00000106420,ENSMUST00000029602 2 2 4 93 3 123309944 123330889 AAAGTTTGCCTTAGAGCAC 58 123309869 123309888 ATAAAGCTGAACATGGACAG 57 NA Mus musculus 50 Trim2 ENSMUSG00000027993 ENSMUST00000107692,ENSMUST00000107691,ENSMUST00000107695,ENSMUST00000107693,ENSMUST00000107694,ENSMUST00000065380,ENSMUST00000054990 2 7 7 102 3 83994504 83994522 CAGAAGGCTGTGAAGAGAC 59 83982086 83994438 TTCTTCCTTTGGTACCGAC 59 NA Mus musculus 50 3110001D03Rik ENSMUSG00000028398 ENSMUST00000030103 2 1 1 120 4 74923954 74923972 ACCTACGTCTATTTGGTGG 58 74923641 74923659 CTACCAGAACAACTACACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Bnc2 ENSMUSG00000028487 ENSMUST00000107198,ENSMUST00000030211,ENSMUST00000102820 2 3 3 103 4 83937668 83937686 TCACTACAGGAACGTTCAC 59 83922338 83937601 TATTGGCACTGTGTCTGTC 59 NA Mus musculus 50 Nfia ENSMUSG00000028565 ENSMUST00000097969,ENSMUST00000107062,ENSMUST00000075448,ENSMUST00000107061,ENSMUST00000052018,ENSMUST00000107057,ENSMUST00000107055 1 7 7 83 4 97729810 97729828 GACGCTGAAAGAGTTTGTC 59 97729875 97731982 CTTCCATTGGGATTGAGGA 58 NA Nonspecific Mus musculus 50 Cyp2j13 ENSMUSG00000028571 ENSMUST00000107078 1 1 4 99 4 95725809 95734886 CTAATGGTCCATTACCCAGG 59 95725729 95725747 ATGTTGTCTCTGTTCCAGC 59 NA Mus musculus 50 Stil ENSMUSG00000028718 ENSMUST00000067847 3 1 2 92 4 114694117 114694136 AATAAGCATGACACTGACCT 59 114694189 114702488 TAATAAGCGCTGGATCTTCTG 59 NA Mus musculus 50 Dnajb6 ENSMUSG00000029131 ENSMUST00000012734 1 1 3 88 5 30080183 30082784 GACTTCTTTGGTCTTCTAGGG 59 30082834 30082852 TACACGTAGTAGCCATGGA 59 NA Mus musculus 50 Apbb2 ENSMUSG00000029207 ENSMUST00000068206 3 1 3 91 5 66783088 66783522 ACATTTGGAAGGATTTGCAC 59 66783016 66783034 TTTCAAGGATGCATAGCGT 59 NA Mus musculus 50 Glmn ENSMUSG00000029276 ENSMUST00000082121,ENSMUST00000078021 2 2 3 80 5 107986986 107987004 TCTCTGTTAGACCTGGTCC 59 107986352 107986943 TGAAGCCATAATCCTGTCTG 59 NA Mus musculus 50 Tpk1 ENSMUSG00000029735 ENSMUST00000067888,ENSMUST00000114644 2 2 3 96 6 43438966 43473897 TACTACACCAAGAAGGGCT 59 43438888 43438907 CCTCTATCTTCCTTTGGAGC 59 NA Mus musculus 50 1700040I03Rik ENSMUSG00000030008 ENSMUST00000032080,ENSMUST00000113770 1 2 2 96 6 85398035 85398500 CTTTGGTGGGATATTTCACAC 59 85397959 85397977 GATAAAGAAGCCGTTGCTG 59 NA Mus musculus 50 Ergic2 ENSMUSG00000030304 ENSMUST00000032447 3 1 2 157 6 148138035 148138056 CCGGGAATTATTAATCCTTTGG 59 148132686 148136562 GAAAGAGATCGCCTTTCTG 58 NA Mus musculus 50 Ttc23 ENSMUSG00000030555 ENSMUST00000032774 3 1 4 159 7 74823940 74837781 ATCAGTCATTTCTCACGGG 59 74837904 74843125 GGATGATGAGATGTGCCTC 59 NA Mus musculus 50 Tmc5 ENSMUSG00000030650 ENSMUST00000098088,ENSMUST00000057320 1 2 2 80 7 125810459 125812684 CTATCACCATCTGGAGACTG 58 125812725 125812745 TGTAGATGGATTGGATGAAGG 59 NA Mus musculus 50 Arhgap17 ENSMUSG00000030766 ENSMUST00000106442 1 1 3 184 7 130430166 130430184 GAATCCATCGCAAAGTGAG 58 130423619 130430019 TAGAATTGGTGTCAGTGACG 59 NA Mus musculus 50 Tgfb1i1 ENSMUSG00000030782 ENSMUST00000070656,ENSMUST00000033046,ENSMUST00000092080,ENSMUST00000098011 3 4 4 97 7 135392697 135392820 TGTTCAGAACCATCTTCCAG 59 135392880 135392898 CTTTGCTAGTCTGTCCTGG 59 NA Mus musculus 50 Cckbr ENSMUSG00000030898 ENSMUST00000069707,ENSMUST00000033189 3 2 2 129 7 112582740 112582758 AACGTGTCCAACAAATGTG 59 112583126 112583144 TTATCACCATCAAAGCGGA 58 NA DesignNoJunction Mus musculus 50 Cask ENSMUSG00000031012 ENSMUST00000116623,ENSMUST00000115438,ENSMUST00000115440,ENSMUST00000115432 3 4 9 95 X 13132035 13132053 TTACCTTCAAGATTGTGCC 57 13126478 13128082 TTACATAGATCTGTCGTCCT 57 NA Mus musculus 50 Rab39b ENSMUSG00000031202 ENSMUST00000033545 1 1 1 60 X 72820052 72820070 CACAGACCTGACAAGAGAC 59 72820010 72820029 CTCCTGGATTGTAATCTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sytl4 ENSMUSG00000031255 ENSMUST00000113297 2 1 3 100 X 130482345 130482363 AAACACTTTCCTTGGAGAG 57 130472577 130482281 CCATTACTGATCCCTTTCC 57 NA Mus musculus 50 Gpm6b ENSMUSG00000031342 ENSMUST00000112236,ENSMUST00000060210,ENSMUST00000112228,ENSMUST00000112229 3 4 12 81 X 162821867 162821887 TTCTACATGTCCTATCACCTG 58 162821930 162824899 TCATGAGGAAGTGGATCAG 58 NA Mus musculus 50 Amelx ENSMUSG00000031354 ENSMUST00000066112,ENSMUST00000112118 3 2 5 80 X 165620457 165621845 ACTTAAGCTATGAGGTGCT 57 165620126 165620144 GTTCGTAACCATAGGAAGG 57 NA Mus musculus 50 Nxf7 ENSMUSG00000031410 ENSMUST00000113163,ENSMUST00000033784,ENSMUST00000033785,ENSMUST00000113160 2 4 4 80 X 132123166 132123185 GGAAGTATGACAAGACACAG 57 132123007 132123123 CACAATGGAAATCCACAGG 58 NA Mus musculus 50 Mcf2l ENSMUSG00000031442 ENSMUST00000110876,ENSMUST00000033819,ENSMUST00000098927,ENSMUST00000110873,ENSMUST00000110863 3 5 12 165 8 13013993 13014822 TCAAAGGTCAGAAAGCCTC 59 13017404 13017422 TTGATGAGTTCCTCAGCAC 59 NA Mus musculus 50 Cnot7 ENSMUSG00000031601 ENSMUST00000110472,ENSMUST00000034012,ENSMUST00000110474 2 3 4 90 8 41584708 41584726 TTCTTTGAGATCCTTCGGT 58 41581257 41584654 CCTGTAATCCACCTTTGAG 57 NA Mus musculus 50 Ap1g1 ENSMUSG00000031731 ENSMUST00000034171 2 1 2 83 8 112353564 112356623 CATTTCAGAAAGCTTGTGC 57 112356670 112356688 AGAGACATCATGTTCTGGG 58 NA Mus musculus 50 Fdx1 ENSMUSG00000032051 ENSMUST00000034552 3 1 2 113 9 51751748 51756693 ACTAACAGACAGGTCAAGG 58 51751653 51751671 CTCATGTCAACAGACTGTC 57 NA Mus musculus 50 Car12 ENSMUSG00000032373 ENSMUST00000071889 2 1 2 81 9 66601560 66601579 AAATGATCAACAACTTCCGG 58 66601623 66610222 TTGGTAAGCAGTCCTTGTC 59 NA Mus musculus 50 Csnk1g1 ENSMUSG00000032384 ENSMUST00000085436 2 1 2 101 9 65880061 65880079 AATGGAGAGCTGAATGTCG 59 65880144 65882866 TTTCAGGCAGTTAGCTTCC 59 NA Mus musculus 50 1700036D21Rik ENSMUSG00000032493 ENSMUST00000011392,ENSMUST00000098345 2 2 2 88 9 110718048 110718930 TTGAACAAGGTAGGTCGTC 59 110718981 110719000 GATGTCCTTGAGAATCTGGT 59 NA Mus musculus 50 Uba7 ENSMUSG00000032596 ENSMUST00000035216,ENSMUST00000075082 2 2 2 82 9 107880636 107880803 GATTGTCAGCCAAGAAACTG 59 107880847 107880866 TGTTGGTCACTCAGTTTCTC 59 NA Mus musculus 50 Nlrp4f ENSMUSG00000032999 ENSMUST00000037372 2 1 2 80 13 65284375 65286282 GGAGTCACTATGTTTGAGC 57 65284313 65284331 TTCTGGTTGTTCTTCAGGA 58 NA Mus musculus 50 Ctdspl2 ENSMUSG00000033411 ENSMUST00000099470 1 1 7 80 2 121819154 121819410 GATGTCATTTATCAGCAGGT 57 121819453 121819471 AAATCCCAGTCTTAACGTG 57 NA Mus musculus 50 Tmem35 ENSMUSG00000033578 ENSMUST00000037687 2 1 1 60 X 130839285 130839305 ACAGATCTTCTGAGAAGAAGG 58 130839326 130839345 TCATACAAGGATGGTTGCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mapkbp1 ENSMUSG00000033902 ENSMUST00000102506,ENSMUST00000066058 2 2 2 80 2 119842539 119842557 GTGAGATGCTGAAAGTGGA 59 119842601 119842887 GCAGTTTCAAACCTGTGTC 59 NA Mus musculus 50 Zxdc ENSMUSG00000034430 ENSMUST00000075117 2 1 3 60 6 90332505 90334170 TCTCTACTTGGAAAGTGGG 58 90334193 90334212 CTTGACTAGTTGAATGGCTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Bmp2k ENSMUSG00000034663 ENSMUST00000035635 2 1 2 81 5 97503749 97515767 CATTTCTCACTCAGGTTCTC 57 97515811 97515829 TTTGGTAAGGTTTGCAGTG 58 NA Mus musculus 50 Ppil5 ENSMUSG00000034883 ENSMUST00000110621 2 1 2 88 12 70272869 70272888 GCTCTTCACCAAATTTGTGG 59 70272939 70275388 CAGGATTGGCCTTACTCAG 59 NA Mus musculus 50 Ncapd3 ENSMUSG00000035024 ENSMUST00000086198 1 1 2 84 9 26890944 26890965 ACAGATGAAGATCATCTCACAG 59 26893569 26902311 TTTACGTTCCACTGTGGAG 59 NA Mus musculus 50 Secisbp2 ENSMUSG00000035139 ENSMUST00000040117,ENSMUST00000110044 3 2 2 83 13 51750595 51752254 GCAGTTTGAAATCTGATGGT 58 51752299 51752318 CAGGTTTAGAGGTAGATGCA 58 NA Mus musculus 50 Abi3bp ENSMUSG00000035258 ENSMUST00000096012,ENSMUST00000048280 1 2 4 80 16 56647203 56652260 ACTACATCTGCACCTTTAGAG 59 56652300 56652320 TTGTAGTTCCTCTTGACTAGG 58 NA Mus musculus 50 Rcbtb1 ENSMUSG00000035469 ENSMUST00000043227,ENSMUST00000111255,ENSMUST00000022551 2 3 5 80 14 59849308 59849327 CATCAAGCGAGGAATTACTG 58 59849369 59854066 TCTTCTAAATCCTCTGCGTC 59 NA Mus musculus 50 Cnot1 ENSMUSG00000036550 ENSMUST00000098473 3 1 3 80 8 98264823 98265649 TATTACTGTGGCAACTGGT 58 98264758 98264776 GGCTCTTGTTATGAGACAC 57 NA Mus musculus 50 Etl4 ENSMUSG00000036617 ENSMUST00000114627 3 1 12 80 2 20261667 20261685 TTGACAGAGTATCAGCAGG 58 20261728 20451596 TCTCCCTTGTTCTTTGTGAG 59 NA Mus musculus 50 Noxa1 ENSMUSG00000036805 ENSMUST00000114373,ENSMUST00000044018 3 2 2 142 2 24945790 24946022 ACAAAGTGCAGAAACAGGT 59 24944718 24944736 ATCAGGAATGACAGAAGCC 59 NA Mus musculus 50 Entpd8 ENSMUSG00000036813 ENSMUST00000114378,ENSMUST00000114376 1 2 4 81 2 24939600 24940256 CAGTTCTATGTGGAAGTCAG 57 24940300 24940318 ATACGAGGATGTACAGACC 57 NA Mus musculus 50 Gm1964 ENSMUSG00000037336 ENSMUST00000085790 1 1 3 124 12 4873606 4873624 ATGTTCAGAACTTGGTGCT 59 4872105 4873258 TCATACCCTGCAAACACAG 59 NA Mus musculus 50 Rps16 ENSMUSG00000037563 ENSMUST00000082134,ENSMUST00000041274 2 2 2 76 7 29136045 29136063 GAAATGGGCTCATCAAGGT 59 29136102 29137204 CTCCAGTAACTTGTACTGCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Tnfrsf23 ENSMUSG00000037613 ENSMUST00000097931 1 1 2 167 7 150867376 150867394 ATGATGTCTGTTGCAAGAC 58 150856912 150865860 CACTGTCACCTTTATCACAG 58 NA Mus musculus 50 Inf2 ENSMUSG00000037679 ENSMUST00000101029 3 1 2 162 12 113850095 113850113 CAGAATCTGCACTTGACAC 58 113850239 113850768 GGGACAAACTCTTCTTGGT 59 NA Mus musculus 50 Jmjd1c ENSMUSG00000037876 ENSMUST00000051446,ENSMUST00000095573 1 2 2 80 10 66686861 66686880 TCGACCTCACAAGATTACAG 59 66686921 66687496 CTCTCCAATTCTTCTTTGTGG 58 NA Mus musculus 50 Parp11 ENSMUSG00000037997 ENSMUST00000112195,ENSMUST00000112193,ENSMUST00000039680 3 3 4 109 6 127421587 127421608 TCAGTTAGCAGTGAAGATATCG 59 127421677 127424263 TGCTTCATTTCTGCAAAGTC 59 NA Mus musculus 50 Galnt11 ENSMUSG00000038072 ENSMUST00000045737,ENSMUST00000114952,ENSMUST00000114950 2 3 3 81 5 24754705 24754723 AGCACGCCTTTAATATGCT 59 24754768 24755913 CTCCTACACTCTGCATTCC 59 NA Mus musculus 50 Susd4 ENSMUSG00000038576 ENSMUST00000048739,ENSMUST00000085724 2 2 2 129 1 184817654 184818909 TCAAATCAGAACAAACGTGG 58 184819001 184819019 TTGGTCTGGAACATTCTGG 59 NA Mus musculus 50 Atp6v0a4 ENSMUSG00000038600 ENSMUST00000040259,ENSMUST00000114908 3 2 2 80 6 38038656 38038675 AAGAGCTTTCTGGAACTGAC 59 38038007 38038615 ACCTAAGTTGGTTTCTGTCTC 59 NA Mus musculus 50 Scgb3a2 ENSMUSG00000038791 ENSMUST00000115525,ENSMUST00000043803 1 2 2 60 18 43926366 43926384 CTTCTCATCAACCGTCTCC 59 43926407 43926426 GAATAATGTCGTCCAAAGGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ythdf1 ENSMUSG00000038848 ENSMUST00000108876,ENSMUST00000037299 1 2 2 80 2 180653893 180653911 GGTTCTTTGCATCAGAAGG 58 180646904 180653849 ACTGTTACTCGGATTGGAC 58 NA Mus musculus 50 Ncoa7 ENSMUSG00000039697 ENSMUST00000105514,ENSMUST00000068567,ENSMUST00000092610,ENSMUST00000099982 1 4 4 89 10 30368338 30372754 CATGGATAACCAGATATTTGGG 58 30368270 30368288 GTGTAGAGAAACGTTTCGC 59 NA Mus musculus 50 Trub2 ENSMUSG00000039826 ENSMUST00000113807,ENSMUST00000048044 3 2 3 83 2 29637712 29638841 TCTCACCAAGGATTACACAG 59 29637648 29637666 GTCTTCTCTATCAGCCGTC 59 NA Mus musculus 50 Clstn1 ENSMUSG00000039953 ENSMUST00000084120,ENSMUST00000105691 2 2 3 93 4 148988274 149001332 CTTTGCAGGTGAGATTTGTG 59 149001388 149001406 GATTATTCCCTCACCCGTG 59 NA Mus musculus 50 Arntl2 ENSMUSG00000040187 ENSMUST00000111639,ENSMUST00000080530,ENSMUST00000111636 3 3 4 145 6 146770648 146770668 GGAAATTCGTCTATGTTGACC 59 146771213 146771629 CTTACTCTGCAGAACTGCT 59 NA Mus musculus 50 Parc ENSMUSG00000040327 ENSMUST00000113441 3 1 2 149 17 46657551 46657570 CACATTGACCAACAAATCCA 58 46656871 46657442 CATCATCTTCTGATAGAAGTGC 58 NA Mus musculus 50 2900008C10Rik ENSMUSG00000040363 ENSMUST00000115513,ENSMUST00000065143 1 2 4 111 X 11633548 11633566 TAACTCGGCAGGTTATGTG 59 11632804 11633474 TTGTAATCCTTCCATCTGCA 59 NA Mus musculus 50 Spns2 ENSMUSG00000040447 ENSMUST00000045303 2 1 2 145 11 72269821 72269839 TTTCTAACTGGGCCATCAC 59 72267708 72267808 TAGGTCCGAGATAAAGCCA 59 NA Mus musculus 50 Wbscr27 ENSMUSG00000040557 ENSMUST00000047196,ENSMUST00000111221,ENSMUST00000111219,ENSMUST00000068617,ENSMUST00000111218 1 5 5 69 5 135408706 135409349 GAGTATGACCAGGATGTGG 59 135409382 135409400 CTCGACTGAGACAATCCAC 59 NA DesignRelaxed Mus musculus 50 Nlrp9c ENSMUSG00000040614 ENSMUST00000085944 2 1 2 86 7 27165594 27167313 TCCAAAGATTGTTGTGTTCC 58 27165527 27165548 GGTATTTCAGTTGTGGTATCTG 58 NA Mus musculus 50 Klc3 ENSMUSG00000040714 ENSMUST00000108459,ENSMUST00000047170,ENSMUST00000108458 3 3 3 159 7 19982345 19982363 CTGGTGATCCAGTATGCTG 59 19981927 19982223 TGTATTTGTTCTGGTCCCTG 59 NA Nonspecific Mus musculus 50 Lat2 ENSMUSG00000040751 ENSMUST00000077636 2 1 2 115 5 135081822 135082238 CCTTGAGGGAAGTAACCAG 59 135079330 135079348 CGTAGGAGTTGGAATCGTC 59 NA Mus musculus 50 Abca8a ENSMUSG00000041828 ENSMUST00000100287,ENSMUST00000046223,ENSMUST00000106662,ENSMUST00000106664 1 4 4 97 11 109947844 109947863 TATTCACCAACGCTTACTCC 59 109945566 109947784 GGAATGACAATGAGCTGTG 58 NA Mus musculus 50 Agrn ENSMUSG00000041936 ENSMUST00000105575,ENSMUST00000105574,ENSMUST00000075787 2 3 6 89 4 155546732 155546750 CCAACAGATCCAGGTATCC 59 155546522 155546679 GGAAACCAGTCAAAGTCCA 59 NA Mus musculus 50 Inpp5f ENSMUSG00000042105 ENSMUST00000054397 3 1 3 84 7 135802590 135802612 ACCAGTCTGTAAAGTCACC 58 135802660 135807163 CTTCTTACAGAGCTCCAGC 59 NA Mus musculus 50 Armc5 ENSMUSG00000042178 ENSMUST00000044660 1 1 1 95 7 135386122 135386140 GTGTCTCACCAGATGACTG 59 135386862 135386880 CAGTCAGGTTCTGTAGCAG 59 NA DesignNoJunction Mus musculus 50 Osbpl6 ENSMUSG00000042359 ENSMUST00000063499 1 1 5 137 2 76394026 76402845 AAATACAGCTCCAGGTTCC 59 76402946 76402964 AATCCGTGGAACTTTCCAG 59 NA Mus musculus 50 Acot5 ENSMUSG00000042540 ENSMUST00000046422,ENSMUST00000072505 2 2 2 80 12 85414441 85414460 TACTTTGAGGAAGCTGTGAC 59 85416274 85416292 TTTGGAAATCCCTAGCAGG 59 NA DesignNoJunction Mus musculus 50 D330038O06Rik ENSMUSG00000043090 ENSMUST00000039786,ENSMUST00000110201,ENSMUST00000098687,ENSMUST00000110197,ENSMUST00000039427 2 5 5 80 8 72290670 72291545 GGAAGAATTCAAAGGCATGTC 59 72290610 72290628 ATCGTATGGCTTGTTTCCA 59 NA Mus musculus 50 Zmpste24 ENSMUSG00000043207 ENSMUST00000106269 1 1 2 91 4 120768161 120768179 TCTACTCAGAGGTGGAAGG 59 120759989 120761471 GAGAAGAATAAACAGACTGTGG 58 NA Mus musculus 50 Usp48 ENSMUSG00000043411 ENSMUST00000105842,ENSMUST00000030549,ENSMUST00000105840,ENSMUST00000105841,ENSMUST00000097838,ENSMUST00000055131,ENSMUST00000105839,ENSMUST00000105838 2 8 10 81 4 137177110 137177129 GAGAATATCGGAATATGCGG 58 137177172 137179205 CTTACAAAGGGCTTTCACAG 59 NA Mus musculus 50 Rsbn1 ENSMUSG00000044098 ENSMUST00000068879,ENSMUST00000051139,ENSMUST00000106806 2 3 3 81 3 103732940 103757570 ATACTCAGGTCAACAGGAC 58 103757615 103757633 TCTACTGCTCCAACAAGAC 58 NA Mus musculus 50 Mcart6 ENSMUSG00000044348 ENSMUST00000113070,ENSMUST00000113069 1 2 3 161 X 133550792 133550813 GGATGGAAATATTGGACTAAGG 58 133518151 133549804 ATGGAAGAAGCTGGTAACC 59 NA InUTR Mus musculus 50 Zfp444 ENSMUSG00000044876 ENSMUST00000108567,ENSMUST00000108566 2 2 3 104 7 6125619 6125637 TTGTTCTTTGACCGAGGAC 59 6135464 6135483 TAGGTTTGAGTTACCAGCAC 59 NA DesignNoJunction, InUTR Mus musculus 50 Defb11 ENSMUSG00000045337 ENSMUST00000051965 1 1 1 60 8 23015962 23015984 CCTCCTCATACCAAGTTTATAGG 59 23015924 23015942 TGTTTATGCAACAGTGGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Whdc1 ENSMUSG00000045795 ENSMUST00000085099 1 1 3 92 7 88736605 88738020 TCTTACTAACAGCCCATTCTC 59 88741015 88741033 CATTGTCCTCCTCTGAGTC 59 NA Mus musculus 50 Zfp526 ENSMUSG00000046541 ENSMUST00000055604 1 1 1 76 7 26009208 26009226 CAACTTGACTGACAGACTG 57 26009359 26009377 TGTGTTGGTATCTCAGCTG 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 C230095G01Rik ENSMUSG00000048108 ENSMUST00000056623 3 1 1 101 6 116646892 116646910 CTGCTTCCAGAAGTTCCTC 59 116645532 116646828 ATGATTAACATGGAGCCTGG 59 NA Mus musculus 50 5930416I19Rik ENSMUSG00000048668 ENSMUST00000112152 1 1 3 183 6 128309362 128312084 TAAGATGTAGCATGGTTTGC 58 128309198 128309216 ATTCATAGTGGTGTTTGGG 57 NA InUTR Mus musculus 50 Atxn7l2 ENSMUSG00000048997 ENSMUST00000102633 2 1 2 120 3 108010971 108011362 AGAAGACATGTCCATCTTCG 59 108010512 108010888 ATGTCTTCTTTCGCAATGC 59 NA Mus musculus 50 Bmpr1b ENSMUSG00000052430 ENSMUST00000029948,ENSMUST00000106232,ENSMUST00000098568,ENSMUST00000106230 3 4 4 80 3 141505970 141508050 GTTTCTGGAGGTATAGTGGA 58 141505909 141505929 TCTCATGTCCTCATAAGAAGG 58 NA Mus musculus 50 A630001G21Rik ENSMUSG00000052760 ENSMUST00000086979 3 1 2 84 1 87621743 87621764 CTCTGTTTAACAGAGTGAACCT 59 87619947 87621698 AAGAGTTTGTCCCTTCCAG 59 NA Mus musculus 50 Spink2 ENSMUSG00000053030 ENSMUST00000065216 2 1 1 60 5 77635971 77635992 CACTTACAGCAATGAATGTACC 59 77634429 77634449 ATTAATATGGCTACCGTCCTC 59 NA DesignNoJunction Mus musculus 50 Wdr69 ENSMUSG00000053161 ENSMUST00000097675 3 1 2 82 1 83187953 83187971 TTGCTACTGGAAGTATGGA 57 83188017 83189200 CAAATGACCGGTTAGAGTG 58 NA Nonspecific Mus musculus 50 Ms4a5 ENSMUSG00000054523 ENSMUST00000067673,ENSMUST00000113013 1 2 2 60 19 11351112 11351130 GCAGTGTGGTGTTATTACC 58 11348759 11348780 GCTGAAGATCATCAACATAACC 59 NA DesignNoJunction Mus musculus 50 Srrp ENSMUSG00000054679 ENSMUST00000067864,ENSMUST00000108159 3 2 2 124 4 33313131 33317903 GACAGCCTGAAAGAGTCTC 59 33317990 33318009 GATCCAGAATTCCTTCTCGG 59 NA Mus musculus 50 Stfa1 ENSMUSG00000054905 ENSMUST00000068182 3 1 1 66 16 36452257 36452275 AAATCTCAAGTCGTTGCTG 58 36450793 36450811 GAAGGAAACAACCATTCCC 58 NA DesignNoJunction Mus musculus 50 Pprc1 ENSMUSG00000055491 ENSMUST00000111899 3 1 4 170 19 46141764 46142517 TAGGAAACTCAGGCATTGAC 59 46143599 46143618 TGGATTTAGGAGATTTGGCT 58 NA Mus musculus 50 Grik2 ENSMUSG00000056073 ENSMUST00000105487,ENSMUST00000105485,ENSMUST00000078692,ENSMUST00000079751 2 4 6 60 10 48852514 48852534 GATTGGTGGCCTTATAGACTC 59 48833416 48852492 ATATGGAGAACCCATGGGA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Pla2g4a ENSMUSG00000056220 ENSMUST00000070200 3 1 2 110 1 151769255 151779796 CACATTATAGTGGAACACCAG 58 151749553 151749571 ATAAGGATCTGGAGTGTCC 57 NA Mus musculus 50 Mpp7 ENSMUSG00000057440 ENSMUST00000115869 3 1 2 80 18 7355065 7355084 ACAAGTATAGACTCGGTTCG 58 7353284 7355022 ATGCTTCACTGTATGAGGC 59 NA Mus musculus 50 Lilrb3 ENSMUSG00000058818 ENSMUST00000078451,ENSMUST00000049747 1 2 2 80 7 3665876 3666198 AGGAAAGATGTCCAGAAAGAG 59 3665816 3665834 CTGGAGTTCTCCTTTCCTG 59 NA Mus musculus 50 9430015G10Rik ENSMUSG00000059939 ENSMUST00000072554 2 1 2 161 4 155496127 155496467 GTGTAGAATTCTCACTGGC 57 155497710 155497728 TAGAAGAATCCAGCCACAG 58 NA Mus musculus 50 Caln1 ENSMUSG00000060371 ENSMUST00000086029,ENSMUST00000111287,ENSMUST00000111288 2 3 3 82 5 130981989 130982007 CTCAACCGATCTCTGTCTG 59 130982053 131093725 GCTTCTCGGATTTCATCCA 59 NA Mus musculus 50 Kalrn ENSMUSG00000061751 ENSMUST00000076810,ENSMUST00000074924,ENSMUST00000114968,ENSMUST00000114961,ENSMUST00000089655,ENSMUST00000114960,ENSMUST00000114957 2 7 13 99 16 34314435 34332217 ACTCCATGAATGCCTATGTC 59 34314355 34314374 GAGATCTGCTTGATTTGCTG 59 NA Mus musculus 50 Sphk1 ENSMUSG00000061878 ENSMUST00000106388,ENSMUST00000106387,ENSMUST00000100201,ENSMUST00000106386,ENSMUST00000063396,ENSMUST00000063446,ENSMUST00000100200,ENSMUST00000106385 3 8 8 129 11 116396470 116396488 TGATGGTCTGATGCATGAG 59 116396657 116396676 ATAGTGGTTCACAGAAGCTG 59 NA DesignNoJunction Mus musculus 50 Ufc1 ENSMUSG00000062963 ENSMUST00000080001,ENSMUST00000111302 1 2 2 88 1 173219721 173220030 CGACATCGAGTTTGAAATTCC 59 173219653 173219671 ACATCTTTGCTGTCTTCCC 59 NA Mus musculus 50 Kif1b ENSMUSG00000063077 ENSMUST00000060537,ENSMUST00000055647 1 2 4 81 4 148572588 148572606 TGATGCTGTTCTTTCCCTG 59 148566781 148572543 GAAACGGTAGAAGGTCCTG 59 NA Mus musculus 50 Olfr65 ENSMUSG00000063615 ENSMUST00000081748,ENSMUST00000104878 3 2 2 60 7 111041740 111041758 TTCTCATATTGCCGTTCCC 59 111041698 111041716 TCATGACATCTTGGTGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp238 ENSMUSG00000063659 ENSMUST00000094276,ENSMUST00000077225 3 2 2 60 1 179378086 179378106 GTTGGCACTAATGACTATGAC 58 179378128 179378146 TGTTAGTGCTCACACTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Usp51 ENSMUSG00000067215 ENSMUST00000095755,ENSMUST00000087199 2 2 2 60 X 149442547 149442565 ACAAGAACAGACTCCACTC 58 149442588 149442607 TGTTTGTCAGTAAAGCATCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Klra7 ENSMUSG00000067599 ENSMUST00000112013,ENSMUST00000049304,ENSMUST00000112012,ENSMUST00000088011,ENSMUST00000032286 3 5 5 80 6 130176509 130176528 TGGAGTGGATGTAAACAGAC 59 130174198 130176468 AAGGAACTTCAGTTCATCCTC 59 NA Nonspecific Mus musculus 50 Pick1 ENSMUSG00000068206 ENSMUST00000053926,ENSMUST00000018295 3 2 2 80 15 79076866 79076886 ATAAAGCCATCCCTGATACAC 59 79076927 79077710 CCTTTAGACAGTACGACAGG 59 NA Mus musculus 50 Shroom4 ENSMUSG00000068270 ENSMUST00000103005,ENSMUST00000089520 3 2 2 90 X 6162765 6168083 GCCATACAGGAATTTCCTG 58 6200778 6200797 CCTTAGAATGAGCCATTTCC 58 NA Mus musculus 50 Prl6a1 ENSMUSG00000069259 ENSMUST00000091680,ENSMUST00000091679 3 2 2 85 13 27407250 27407270 TATATGACCTGCTTGATCACG 59 27407314 27408132 ATCCTCCATAAATATCCTGTGC 59 NA Mus musculus 50 Ank3 ENSMUSG00000069601 ENSMUST00000092434,ENSMUST00000092431,ENSMUST00000054167,ENSMUST00000047061,ENSMUST00000092432,ENSMUST00000092433 3 6 7 80 10 69421750 69421768 GACCTGGAAGGAACATCAG 59 69421812 69436479 CTGTCGAGTTCTTCATCCA 59 NA Mus musculus 50 Naip5 ENSMUSG00000071203 ENSMUST00000091317 1 1 2 91 13 100998437 100998455 ATATGCACTTCCAGAAGCC 59 100987555 100997592 GGATGAATTTAACCACCACTG 59 NA Mus musculus 50 C87414 ENSMUSG00000072820 ENSMUST00000101020 2 1 1 60 5 95452975 95452994 CAGACCAAGTTATCAGAGAC 57 95453016 95453035 TCTAATTCTGTGATGTGCTC 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000021199 ENSMUSG00000072999 ENSMUST00000081929,ENSMUST00000101278 2 2 2 85 6 72586499 72586517 GCAAGCTACATAGGTCGAG 59 72587102 72587123 CATAATGGAATCTGATTCCCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG331493 ENSMUSG00000073010 ENSMUST00000101297 2 1 2 81 X 103869996 103904423 CATTTCTGTGGAATCCTGC 58 103904468 103904486 TTGAACATCAGGTACCTGC 59 NA InUTR Mus musculus 50 Foxr1 ENSMUSG00000074397 ENSMUST00000114742,ENSMUST00000098837 3 2 2 107 9 44244181 44244300 CCCTGATAAAGATGGTCCA 58 44244092 44244110 TGGTCTTCCTCTTTCACTG 58 NA Mus musculus 50 BC089597 ENSMUSG00000074639 ENSMUST00000026464 3 1 2 154 10 127303857 127303875 GGATGTCACCAAGACAGAG 59 127311953 127311972 AGTACACTTGCAAGTCCTG 59 NA Mus musculus 50 Wipf1 ENSMUSG00000075284 ENSMUST00000094681,ENSMUST00000102680,ENSMUST00000102679 3 3 3 97 2 73282624 73285916 CATTTGCACTCGCTAACAC 59 73282545 73282563 TAGCTTCTTCCCTTTGCTG 59 NA Mus musculus 50 ENSMUSG00000075532 ENSMUSG00000075532 ENSMUST00000100418 3 1 1 224 2 10636802 10636820 AAGAAAGCAAGTTGACCAC 58 10639190 10639211 CACATAGGTGGTATACATTCAC 58 NA DesignNoJunction Mus musculus 50 Sox19 ENSMUSG00000076431 ENSMUST00000067230,ENSMUST00000110326 1 2 2 66 13 29044558 29044576 GATTCCGTTCATCCAGGAG 59 29044510 29044529 CTTGTAGTCAGGGTAGTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-72 ENSMUSG00000076545 ENSMUST00000103346 3 1 1 93 6 69177064 69177082 AAGGTCACAATGACTTGCA 59 69176989 69177007 CATAAATCCAGGGTTTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-58 ENSMUSG00000076554 ENSMUST00000103355 3 1 1 61 6 69450426 69450444 TTACTTGCACTGGTACCAG 59 69450383 69450402 ATGTCCTATGAATCAAGGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 A2BE20_MOUSE ENSMUSG00000078884 ENSMUST00000109002 1 1 4 80 2 176139782 176140952 CTTGGAAGGCATGAAAGAC 58 176140996 176141014 ACTCTGATATGCAAAGGCT 58 NA Nonspecific Mus musculus 50 Kcnip3 ENSMUSG00000079056 ENSMUST00000028850,ENSMUST00000103215,ENSMUST00000099402,ENSMUST00000088538 2 4 4 83 2 127286266 127290791 ACTTTGAGGACTTTGTGGT 58 127286201 127286219 CATAGAGATTGAAGGCCCA 58 NA Mus musculus 50 St6galnac4 ENSMUSG00000079442 ENSMUST00000113293,ENSMUST00000102818,ENSMUST00000113292 1 3 3 109 2 32449915 32451224 AAGAACCGGAGACAATCAG 59 32451297 32451315 TAACTATCGCTGACCATCC 58 NA Mus musculus 50 Apoo ENSMUSG00000079508 ENSMUST00000113898,ENSMUST00000113897,ENSMUST00000113896,ENSMUST00000113895 2 4 4 64 X 91627519 91627537 AACATCTCACAACTCCGAC 59 91627563 91633017 TGGGAGTATATTTCCTGACAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 NP_001075138.2 ENSMUSG00000079634 ENSMUST00000115179,ENSMUST00000115177 2 2 2 124 X 34908568 34908587 GTGCAATCAATACATCAGCA 58 34912021 34912040 ACAGCCTCTTATAACTCCTG 58 NA DesignNoJunction Mus musculus 50 Ccdc112 ENSMUSG00000079668 ENSMUST00000115476 2 1 1 113 18 46443395 46443413 TACAAACCTACCAAAGGCT 58 46442910 46442928 CTAGATTCCTTGTCGCCAG 59 NA DesignNoJunction Mus musculus 50 Nphs1 ENSMUSG00000074208 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-802 ENSMUSG00000076457 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Dennd1c ENSMUSG00000002668 ENSMUST00000011623 1 1 1 80 17 57210040 57210353 CTGTTCAAGCAGTTCATCG 59 57209978 57209997 GATCTCTTGCTCAAATTGGT 58 NA Mus musculus 50 Gsbs ENSMUSG00000002930 ENSMUST00000052827 2 1 1 101 6 55972382 55972400 CCACTGAGATGATGACCAC 59 55972465 55976026 CTGAAAGGTCATCTGAGGG 59 NA Mus musculus 50 Hbp1 ENSMUSG00000002996 ENSMUST00000081639,ENSMUST00000019163 2 2 2 146 12 32625254 32625272 CTTGGAGCCAGAATACCTC 59 32622608 32625145 TGTGTACAGGAGATGATCTG 58 NA Mus musculus 50 Timm50 ENSMUSG00000003438 ENSMUST00000081946 3 1 2 86 7 29093275 29093381 TACAGACAGATGATCATCGAG 58 29093209 29093227 CAGTGTATAAGGTGGCTGG 59 NA Mus musculus 50 Tfam ENSMUSG00000003923 ENSMUST00000105432,ENSMUST00000092430 2 2 2 65 10 70697658 70697676 GATGGGTATGGAGAAGGAG 58 70696199 70697630 TCTCTTCTCTTTACCAGTGC 59 NA DesignNoJunction Mus musculus 50 Zfp81 ENSMUSG00000003929 ENSMUST00000054072 3 1 3 87 17 33472588 33473407 AATTTGAGCACTCTCATGG 57 33472519 33472538 TATGCTCTTGAATCTGTTGG 57 NA Mus musculus 50 Efnb3 ENSMUSG00000003934 ENSMUST00000004036 1 1 1 81 11 69370490 69370712 CTACATAATTGCCACATCAGAC 59 69370430 69370448 CTTCATGCCTCTGGTTAGG 59 NA Mus musculus 50 Tax1bp1 ENSMUSG00000004535 ENSMUST00000080723 2 1 1 80 6 52671449 52677201 GGTATATTCAAGGTTGGATGG 58 52677243 52677261 TTCCACATAATGTTCAGGC 57 NA Mus musculus 50 Psg17 ENSMUSG00000004540 ENSMUST00000004655 3 1 1 158 7 19404268 19405261 CTTCAGGTGTACTCCTCTC 58 19404128 19404147 TCCTTTGTACCAGGTAAGTG 58 NA Mus musculus 50 Hmox1 ENSMUSG00000005413 ENSMUST00000005548,ENSMUST00000098626 2 2 2 114 8 77619862 77620753 GAGAAGGCTTTAAGCTGGT 59 77620831 77620849 TCCTCAGGGAAGTAGAGTG 59 NA Mus musculus 50 Mthfd2 ENSMUSG00000005667 ENSMUST00000005810 1 1 1 81 6 83259502 83259520 ATACACTCCCAAAGAGCAG 58 83259036 83259458 GATCAGATTTGGAATGCCAG 58 NA Mus musculus 50 Tcfap4 ENSMUSG00000005718 ENSMUST00000005862 1 1 1 60 16 4551779 4551798 AGGAGAAGACTAGACTCCTG 59 4551393 4551756 CTCAGCTCCTGGATAAAGC 59 NA DesignNoJunction Mus musculus 50 Itgae ENSMUSG00000005947 ENSMUST00000006101,ENSMUST00000102537 1 2 2 80 11 72945260 72946205 CCATCTCCAATTCCAATGAG 58 72946248 72946266 AAAGAACTGCAATGAAGGC 58 NA Mus musculus 50 1200013P24Rik ENSMUSG00000005982 ENSMUST00000006138,ENSMUST00000115860 1 2 2 101 16 3894474 3897258 TTTCCCATTGAGTACCCAG 58 3897323 3897341 TATCATTCCCACAATGGCA 58 NA Mus musculus 50 BC003331 ENSMUSG00000006010 ENSMUST00000006167,ENSMUST00000094477 3 2 4 156 1 152239739 152239757 CACATGTGCACATTCTGAG 59 152235776 152237372 TTGTGAAGAACACTGTCCT 58 NA InUTR Mus musculus 50 Homer1 ENSMUSG00000007617 ENSMUST00000060490,ENSMUST00000079086 1 2 10 107 13 94125938 94125956 GTATCAATGGGACAGACGA 58 94126026 94157489 TGATTGCTGAACTATGTGGA 59 NA Mus musculus 50 Adam21 ENSMUSG00000008438 ENSMUST00000008582 2 1 1 60 12 82661450 82661469 AACAAGACACAATTTCCACC 58 82661409 82661430 GTTGGTACAGTAGTCTCTTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Faf1 ENSMUSG00000010517 ENSMUST00000102724 1 1 1 80 4 109467396 109467415 TACAAGCATACCTGTTCGAC 59 109467456 109502427 GATTCAGCAAGACACATTGAG 59 NA Mus musculus 50 Cdc6 ENSMUSG00000017499 ENSMUST00000092706,ENSMUST00000093937 2 2 2 92 11 98775314 98776406 GATCGACTTAGTCAGGTGTC 59 98776461 98776479 GATGTCTCCTGAAACAGCA 59 NA Mus musculus 50 Crk ENSMUSG00000017776 ENSMUST00000093115 2 1 4 148 11 75505932 75505950 CTGAGAATCCGGGATAAGC 59 75506062 75514062 ATCAAACCATCAGGAGCTC 59 NA Mus musculus 50 Ddx27 ENSMUSG00000017999 ENSMUST00000018143 3 1 1 80 2 166853199 166853219 GAAGGAGATTATCCGAATGTG 58 166853259 166853379 AGATCTTTCACCTCATCTGTC 59 NA Mus musculus 50 Pelp1 ENSMUSG00000018921 ENSMUST00000019066 2 1 2 185 11 70219806 70223266 GAATCTTTCAGCTCTTGGG 58 70216242 70219134 AAATTCAGAAGAACCTGCAG 58 NA Mus musculus 50 Gtlf3b ENSMUSG00000018931 ENSMUST00000019075 3 1 1 161 11 60720458 60720476 TATGAGTATGTGGGCAAGC 59 60719555 60719574 ATACTTCTGGATGTACCAGC 58 NA DesignNoJunction Mus musculus 50 Hoxb1 ENSMUSG00000018973 ENSMUST00000019117 1 1 1 72 11 96227608 96227626 CTCTGAGGACAAGGAATCG 59 96227662 96227680 CTTCATCCAGTCGAAGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rab5c ENSMUSG00000019173 ENSMUST00000107364,ENSMUST00000019317 1 2 2 115 11 100579831 100579849 TTTGAGATCTGGGACACAG 58 100579268 100579753 GCAAATGTATCTGTGTTGGT 58 NA Mus musculus 50 1700093K21Rik ENSMUSG00000020286 ENSMUST00000020527 3 1 1 87 11 23418096 23418114 CTGAAGACCCTCTGTACAG 58 23417367 23418045 AGTGCATTAGGACCTTGTC 59 NA Mus musculus 50 Mpg ENSMUSG00000020287 ENSMUST00000020528 2 1 1 147 11 32130035 32131575 TTGAATGTCTCTAGTCAAGGG 59 32131684 32131702 CACTACAGAGTTCACGGTC 59 NA DesignNoJunction Mus musculus 50 Sgcd ENSMUSG00000020354 ENSMUST00000109220,ENSMUST00000077221,ENSMUST00000109219,ENSMUST00000020613 1 4 4 65 11 46896344 46939045 GAGTCTTAGGAGCTGAAGG 58 46896297 46896315 GGTCTGCTCTGACATTAGG 59 NA DesignRelaxed Mus musculus 50 Cnot6 ENSMUSG00000020362 ENSMUST00000109183,ENSMUST00000020624 1 2 2 80 11 49500396 49500415 AACCAGTTACGAGTTCTACC 59 49498841 49500355 GGTAAGTGGATTTCCTTTCAG 58 NA Mus musculus 50 Rdh12 ENSMUSG00000021123 ENSMUST00000021548 2 1 1 85 12 80311877 80311895 AAGGTAGTGGTCATCACAG 58 80311944 80312390 ATGTATACTCGTGCTCCTC 58 NA Mus musculus 50 Tc2n ENSMUSG00000021187 ENSMUST00000095460,ENSMUST00000110047 2 2 2 86 12 102931378 102931396 AAACTTCCTGGTTCCTCTG 59 102928048 102931329 AAATGAGTCATGTCTCTGGA 58 NA Mus musculus 50 Pdlim7 ENSMUSG00000021493 ENSMUST00000046246,ENSMUST00000109909 1 2 4 84 13 55600308 55600326 AAGATTGATGCTGGAGACC 59 55600083 55600260 TGATCTGACATATTGCGCA 59 NA Mus musculus 50 Ankra2 ENSMUSG00000021661 ENSMUST00000091356,ENSMUST00000022164 3 2 2 81 13 99037414 99038389 CCTCTGTTAGCAAATTCTCTG 58 99038431 99038450 CTTGTTCAATACGAGTAGCC 58 NA Mus musculus 50 Rgnef ENSMUSG00000021662 ENSMUST00000109426,ENSMUST00000022166 3 2 2 80 13 98737156 98737253 ACTTTGGAAAGCTTCAGGA 59 98737094 98737112 CTCATCGGAATGAGACCTG 59 NA Mus musculus 50 Dph3 ENSMUSG00000021905 ENSMUST00000112001 3 1 3 60 14 32898624 32898643 ACATATTTCTACCCTTGCCC 59 32896420 32898601 ACATGAACTGATCCTTGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Msmb ENSMUSG00000021907 ENSMUST00000022464 3 1 1 82 14 32963378 32963396 TTCCTTAACACTCCCTGGA 59 32963442 32971261 CTAGTAGCGTTGGTACAGC 59 NA Mus musculus 50 Upk3a ENSMUSG00000022435 ENSMUST00000023070 1 1 1 110 15 84849918 84849936 GAACGCATACCTAGTCAGG 59 84850007 84850979 TACTTGAATCTGTACTCAGTGG 59 NA Mus musculus 50 Prm1 ENSMUSG00000022501 ENSMUST00000023144 3 1 1 96 16 10796590 10796608 GCTCATACACCATAAGGTG 57 10796512 10796530 AGATGCTCTTGAAGTCTGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Bcl6 ENSMUSG00000022508 ENSMUST00000023151 3 1 1 100 16 23971569 23971587 ATACAGAGATGTGCCTCCA 59 23970146 23971505 GAAGGTCCCATTCTCACAG 59 NA Mus musculus 50 Nudt16l1 ENSMUSG00000022516 ENSMUST00000050881,ENSMUST00000115846 3 2 2 134 16 4939573 4939591 CTGACATTGGAACAACTGC 59 4940246 4940264 CAGAAAGTTAGGAAAGCCG 58 NA DesignNoJunction Mus musculus 50 Zfp251 ENSMUSG00000022526 ENSMUST00000080406 1 1 1 94 15 76685033 76700244 CCAGACAGATTCTGAGATCG 59 76684958 76684977 TCGGTGATATGAATTCTGGG 59 NA Mus musculus 50 Gsdmd ENSMUSG00000022575 ENSMUST00000023238 1 1 1 106 15 75695537 75695860 TATGCTTGAAGGGTGAAGG 59 75695930 75695948 AGAGCCAATAAGCAGTTGG 59 NA Mus musculus 50 ENSMUSG00000022591 ENSMUSG00000022591 ENSMUST00000023262 1 1 1 60 1 82230773 82230791 TGCTAACATCCACCTTGTC 59 82230814 82230833 AGTTTCTTGGTAGTGACAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Arl6 ENSMUSG00000022722 ENSMUST00000099646,ENSMUST00000023405 3 2 2 85 16 59621163 59622855 ATCACCCAGATATTAAGCACC 59 59621098 59621116 TTTCACAGAGGTCACTGAG 58 NA Mus musculus 50 Serping1 ENSMUSG00000023224 ENSMUST00000111642,ENSMUST00000023994,ENSMUST00000111641 3 3 3 98 2 84610315 84610333 ACACCAACCATAAGATCCG 59 84610053 84610254 TTATCTTCCACTTGGCACTC 59 NA Mus musculus 50 9530002B09Rik ENSMUSG00000023263 ENSMUST00000024032 1 1 1 81 4 122378469 122378487 AAGATTCTCCCTAAGCAGC 59 122378532 122379575 ATACCTTCCACATTTGGGA 58 NA Mus musculus 50 Spast ENSMUSG00000024068 ENSMUST00000024869 1 1 1 80 17 74755500 74758602 CAACTTCTAGAGAAGCTGC 57 74758646 74758664 TGTCAGGTTAGTACTCTCG 57 NA Mus musculus 50 Acsbg2 ENSMUSG00000024207 ENSMUST00000043062 3 1 1 90 17 57001023 57001041 CACCAGACAAGATGGAGAC 59 56996441 57000971 AAGTCATTCCATGAGTACAGG 59 NA Mus musculus 50 1700061G19Rik ENSMUSG00000024209 ENSMUST00000025048 1 1 1 90 17 57020479 57021597 AGATTAACCAGATCCAGGG 58 57021651 57021669 GAGTATAGATTTGGCTGCG 58 NA Mus musculus 50 Wdr46 ENSMUSG00000024312 ENSMUST00000025170 3 1 1 105 17 34080873 34081436 ACAGTAATGGCACAGTGTC 59 34081504 34081523 CCTGTAGAATCTACTGCCAC 59 NA Mus musculus 50 Cyp21a1 ENSMUSG00000024365 ENSMUST00000025223 3 1 1 198 17 34940626 34940997 TGCTAAATGGAAAGATGGAC 57 34940342 34940360 AATTCCTTATGGATGGCCA 58 NA Mus musculus 50 Spink3 ENSMUSG00000024503 ENSMUST00000025381 2 1 1 89 18 43894882 43896761 CTGAGTTTAGCAGGTAACAC 58 43893243 43893262 ATAAATTCTGGGACATCCCG 59 NA DesignNoJunction Mus musculus 50 Grp ENSMUSG00000024517 ENSMUST00000025395 3 1 1 293 18 66033366 66033384 CTGGCTAAGATGTATCCGC 59 66039799 66045882 AGAGTCTACCAACTTAGCG 58 NA DesignRelaxed Mus musculus 50 Ms4a6b ENSMUSG00000024677 ENSMUST00000025580 1 1 1 84 19 11603093 11603111 TATGTTGGAACTTGGCCTG 59 11603158 11603989 GAACATAACATTCCCAGGGA 59 NA Mus musculus 50 Slc25a45 ENSMUSG00000024818 ENSMUST00000025732 3 1 1 104 19 5879875 5880086 CCATTCGACACTGTAAAGGT 59 5880153 5880454 GAAGAAACCCAGGACTGAC 59 NA Mus musculus 50 Vldlr ENSMUSG00000024924 ENSMUST00000025866,ENSMUST00000047645 3 2 2 80 19 27313266 27313285 AGACATGAGCAAAGTATGTG 57 27313328 27314121 TCGTTGATATGGCATTCCT 58 NA Mus musculus 50 Pik3ap1 ENSMUSG00000025017 ENSMUST00000116503,ENSMUST00000059672 3 2 2 85 19 41383010 41395999 AGACCTCTATGTTGAAATGC 57 41382944 41382962 TCATCGAGTCTTTAGTGGG 58 NA Mus musculus 50 Hspa12a ENSMUSG00000025092 ENSMUST00000066285 2 1 1 80 19 58902796 58902814 TCTACATATTCCTCTCCGG 57 58902162 58902752 AGCATCGTTCAAGATATGG 57 NA Mus musculus 50 Bloc1s2 ENSMUSG00000025201 ENSMUST00000026219 3 1 1 175 2 52475601 52475619 AACATGATTGAGGAGCAGG 59 52475758 52475776 CAGCCTCATGACTTAGTGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Farp1 ENSMUSG00000025555 ENSMUST00000026635 1 1 1 83 14 121679154 121680048 AAATCACACCAGGACAGTC 59 121680094 121680113 GATGTTCTCAGACTCAGAGG 59 NA Mus musculus 50 Rab40c ENSMUSG00000025730 ENSMUST00000026826 1 1 1 104 17 26028284 26056320 CTACAGCAACGGGATAGAC 59 26027611 26027629 ATGGTACAGAACCTTCCCT 59 NA Mus musculus 50 Gsta3 ENSMUSG00000025934 ENSMUST00000027067 1 1 1 80 1 21248998 21249017 CCATTCTCAACTACATTGCC 58 21249058 21250145 CTGTGTACATGTCAATGATGG 59 NA Mus musculus 50 Slc40a1 ENSMUSG00000025993 ENSMUST00000027137 2 1 1 80 1 45975197 45975215 GATCACAATCCAAAGGGAC 58 45969308 45975156 CTAATGGTAGCATTCATGTCTG 58 NA Mus musculus 50 Efhd1 ENSMUSG00000026255 ENSMUST00000027472 3 1 1 279 1 89161327 89186058 AACGTATGATGCTGGAAGG 59 89194314 89194332 TTCGAAGAAGTTCTTGGCA 59 NA DesignNoJunction Mus musculus 50 Nuf2 ENSMUSG00000026683 ENSMUST00000111368,ENSMUST00000028000,ENSMUST00000111363 2 3 3 83 1 171453058 171454048 AGCACTTCTACATGATGCC 59 171452993 171453012 AGAACAAACTTCTGACTGGT 59 NA Mus musculus 50 Nr5a1 ENSMUSG00000026751 ENSMUST00000112883,ENSMUST00000028084 1 2 2 96 2 38555762 38555780 CCAAGAGTTAGTGCTCCAG 59 38549774 38555702 GAATTTCACATCGAGGCTG 58 NA Mus musculus 50 Wdr5 ENSMUSG00000026917 ENSMUST00000113953,ENSMUST00000113952 2 2 2 82 2 27389308 27389329 AGATAACCTGGTGTATATCTGG 58 27389371 27390291 TGGAAATCACAACATCTGTG 58 NA Mus musculus 50 Prnd ENSMUSG00000027338 ENSMUST00000110169,ENSMUST00000110171,ENSMUST00000110170 1 3 6 87 2 131779266 131779285 GTTTCGTTTGGTTCATTGTG 58 131780573 131780591 TTATTTCCAGATCCCGCTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Rrbp1 ENSMUSG00000027422 ENSMUST00000016072,ENSMUST00000037875,ENSMUST00000110037,ENSMUST00000110035,ENSMUST00000110034 2 5 5 60 2 143815958 143815977 ATATCTACGACACTCAGACC 58 143815917 143815935 GCAGAAACAACCATAAACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gzf1 ENSMUSG00000027439 ENSMUST00000028928 1 1 1 80 2 148510696 148512260 CCACCTGAGAGTTCATACAG 59 148512303 148512321 ATCAGCATGTGGTTCTGAG 59 NA Mus musculus 50 Snta1 ENSMUSG00000027488 ENSMUST00000109728,ENSMUST00000028991 3 2 2 88 2 154229518 154229536 GGTGAAGATTTGTCCTCTG 57 154209711 154229467 ATGTACTTAACCTCCAACAC 57 NA Mus musculus 50 Edn3 ENSMUSG00000027524 ENSMUST00000029030 2 1 1 101 2 174604255 174605194 GATGTCACCAGTTATTCCG 57 174607389 174607407 GGCTTTATCTGTCCTTGAC 57 NA Mus musculus 50 Sall4 ENSMUSG00000027547 ENSMUST00000109168 1 1 5 60 2 168581281 168581299 TTAGATGTCAAGGCCAAGG 59 168580603 168580621 AGATCTTGCACTGGAATGG 59 NA DesignNoJunction Mus musculus 50 Srms ENSMUSG00000027579 ENSMUST00000016498 2 1 1 81 2 180943427 180943445 CTGGCTTACTACAAGACCA 58 180942695 180943382 CCTGAACCAAGGGTATCTG 59 NA Mus musculus 50 Myh7b ENSMUSG00000027605 ENSMUST00000065973,ENSMUST00000109658,ENSMUST00000103142,ENSMUST00000029135,ENSMUST00000109657 2 5 5 92 2 155383358 155384337 GTTATCTGGTGTTCAAGCA 57 155384391 155384411 GGAACTTCTTAAAGTAGGTGG 57 NA Mus musculus 50 4833422F24Rik ENSMUSG00000027670 ENSMUST00000029213 2 1 1 142 2 165222828 165222846 TTGCTCTTAGTAGCCACAG 58 165221782 165222723 AGAACCTTATATGAGGCGTC 58 NA Mus musculus 50 Ccdc39 ENSMUSG00000027676 ENSMUST00000029222 2 1 1 80 3 33714881 33714901 CACCTTGCAAGTACTTAACAG 59 33714428 33714839 GCATACTCATCACTTGACG 58 NA Mus musculus 50 Stoml3 ENSMUSG00000027744 ENSMUST00000029307 2 1 1 83 3 53307225 53307243 ATGTCTTAGGGACACAGAC 58 53307290 53309368 CATCATCAAGCAAGGTCTG 58 NA Mus musculus 50 Dhx36 ENSMUSG00000027770 ENSMUST00000029336 3 1 1 80 3 62292133 62292478 TTGGAAGAAGAGGATGGTG 58 62292071 62292090 TGACATCAAGAGATCATGCA 59 NA Mus musculus 50 Pla2g12a ENSMUSG00000027999 ENSMUST00000029629 3 1 2 162 3 129581777 129581796 GATAGACACGTACCTCAACG 59 129591866 129593194 TATGTTCAGATGAACGCCA 58 NA Mus musculus 50 Cks1b ENSMUSG00000028044 ENSMUST00000029679 3 1 1 81 3 89220245 89220263 ATCTGAATGGAGGAACCTC 58 89219872 89220200 TAAGATGTGAGGTTCTGGT 57 NA Nonspecific Mus musculus 50 Fbxw7 ENSMUSG00000028086 ENSMUST00000107677 3 1 2 151 3 84769293 84771368 CTTCCTAAAGAGTTGGCAC 58 84771482 84771501 GTGATTCTGAACTTACCCTC 57 NA Mus musculus 50 Clca3 ENSMUSG00000028255 ENSMUST00000029919 1 1 1 103 3 144668915 144668933 AAATCACTGACCTGAAGGC 59 144668038 144668849 GATGTAGTTGGAAGCTCTCC 59 NA Mus musculus 50 Ak3l1 ENSMUSG00000028527 ENSMUST00000102780,ENSMUST00000106946,ENSMUST00000030252,ENSMUST00000106945,ENSMUST00000106948,ENSMUST00000106947 2 6 6 61 4 101135659 101136162 ATCGAACTGTACAAGAGCC 59 101136187 101136205 ATTCTGTTAGTCTCCGTCC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Urod ENSMUSG00000028684 ENSMUST00000030446 1 1 1 89 4 116666064 116666201 GCTACTTACCAGAGTTTAGGG 59 116665995 116666013 GTAGAGTCAGTTCACAGCA 58 NA Mus musculus 50 Tinagl ENSMUSG00000028776 ENSMUST00000030560,ENSMUST00000105999,ENSMUST00000105997,ENSMUST00000105998,ENSMUST00000061267 3 5 5 105 4 129844679 129844698 ATTCCAACGACATCTACCAG 59 129844260 129844508 TCCATGAGTGCTTGAACAG 59 NA Mus musculus 50 Rpl22 ENSMUSG00000028936 ENSMUST00000103191 2 1 1 178 4 151704203 151704221 ATCACTGTCACTTCAGAGG 58 151706514 151706532 TAATCCTCGTCTTCCTCCT 58 NA DesignNoJunction Mus musculus 50 Tnfrsf9 ENSMUSG00000028965 ENSMUST00000030808,ENSMUST00000105671,ENSMUST00000116257,ENSMUST00000105672,ENSMUST00000060901 1 5 5 100 4 150304856 150304874 ACAATCCAGTCTGCAAGAG 59 150304938 150306430 GAACCTGAAATAGCCTGCA 59 NA Mus musculus 50 Prkcz ENSMUSG00000029053 ENSMUST00000030922,ENSMUST00000105624 1 2 3 100 4 154731659 154731677 ACATTCAAGGACCTCTGTG 59 154730613 154731595 GTACAAGGGTCACCTTCAC 59 NA Nonspecific Mus musculus 50 Sorcs2 ENSMUSG00000029093 ENSMUST00000037370,ENSMUST00000070720 1 2 2 60 5 36496571 36571811 GGAAAGTTCTCTGTGGAGG 59 36496529 36496547 CTGGAGAGTAAGCTTGGTG 59 NA DesignNoJunction Mus musculus 50 Ociad2 ENSMUSG00000029153 ENSMUST00000087195 2 1 1 82 5 73717631 73718913 CTAAAGTTGCATTGGCTGG 59 73717567 73717586 GGAATGGAATTTACTCTGGC 58 NA Mus musculus 50 B3gnt4 ENSMUSG00000029431 ENSMUST00000031384 3 1 1 60 5 123960741 123960761 CCTAACAGTTGTTAACACCTC 58 123960783 123960801 ATAGGTTAAGAAGAGGCGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Golga3 ENSMUSG00000029502 ENSMUST00000112512,ENSMUST00000031477 1 2 2 80 5 110622712 110622730 AGAAACTCAGCATCGATCC 59 110622773 110630866 TGATCTAACATGTCAGCCTC 59 NA Mus musculus 50 Sirt4 ENSMUSG00000029524 ENSMUST00000112066,ENSMUST00000112067 1 2 2 86 5 115929670 115929688 CTTTAATAGACCCGCGGAG 59 115928409 115929620 CTTAGGGATCTTGAGCAGC 59 NA Mus musculus 50 Ccr9 ENSMUSG00000029530 ENSMUST00000111454 2 1 1 69 9 123683707 123688404 AACTCACAAGCCTTATTCC 57 123688437 123688455 TAGTCATCTGTGGAAGCAG 58 NA DesignRelaxed Mus musculus 50 2010301N04Rik ENSMUSG00000030051 ENSMUST00000065997,ENSMUST00000032130 1 2 2 80 6 87586963 87591895 GTCTTGTTACAGGAAGAACC 58 87580148 87580166 TCTTCATCCAGAGCAACTC 58 NA Mus musculus 50 Klra6 ENSMUSG00000030173 ENSMUST00000014683 3 1 1 118 6 129858876 129858894 ATAGATTGCAGTCCAGGTG 59 129856744 129858794 TGTTTAACACCTGTCCCTG 59 NA Mus musculus 50 Syt3 ENSMUSG00000030731 ENSMUST00000032980 1 1 1 82 7 51641425 51641445 ACCAATGATAGGTGTCAAGAG 59 51641489 51645881 AGGCTCACGGAAATATCTG 59 NA Mus musculus 50 Bckdk ENSMUSG00000030802 ENSMUST00000071056 1 1 1 166 7 135051037 135051445 CATCATCAGGATCTCAGACC 59 135051574 135051592 CATGCATAGGTCCTGACTG 59 NA Mus musculus 50 Tnni2 ENSMUSG00000031097 ENSMUST00000105971,ENSMUST00000105973 2 2 3 94 7 149629258 149629276 CCGAGAATCTGAGAAGGAG 58 149629334 149629491 GTTGTTTGCAGAGTTCCTG 59 NA DesignRelaxed Mus musculus 50 Fundc2 ENSMUSG00000031198 ENSMUST00000033541 3 1 1 118 X 72637002 72637021 CAAAGTTGACTGGCAAAGAG 59 72637102 72639658 ATGATACAACCTCCTCAGC 58 NA Mus musculus 50 Nxf7 ENSMUSG00000031410 ENSMUST00000113163,ENSMUST00000033784,ENSMUST00000033785,ENSMUST00000113160 1 4 4 80 X 132117672 132117690 CAAGAGCAGCAAAGAATGG 59 132114542 132117629 ATCTTCAAGGCACTTCTGAG 59 NA Mus musculus 50 Rdx ENSMUSG00000032050 ENSMUST00000000590,ENSMUST00000061352 2 2 2 80 9 51877813 51877834 CCTGATACTATTGAAGTACAGC 58 51877875 51881268 TAATTGTGCCCTTTCTAGC 57 NA Mus musculus 50 4833427G06Rik ENSMUSG00000032057 ENSMUST00000034558 2 1 1 104 9 50891728 50894230 GAAAGGATCTCGAAAGAACTG 58 50889596 50889614 TTCTTCTTGGTCCCTTAGG 58 NA Mus musculus 50 Ap4b1 ENSMUSG00000032952 ENSMUST00000076599,ENSMUST00000106824,ENSMUST00000106823,ENSMUST00000047285 2 4 4 83 3 103624370 103624604 TGCATTACTGCATAGAGGA 58 103624651 103624669 CAATGCCAACTAACAGGAG 58 NA Mus musculus 50 Ankrd54 ENSMUSG00000033055 ENSMUST00000040676 1 1 1 80 15 78884510 78884939 GTACCAAAGAACAGGTGGA 59 78884448 78884466 TCTCCATACTCTGCATCTG 58 NA Mus musculus 50 Mgll ENSMUSG00000033174 ENSMUST00000113580 2 1 4 93 6 88714645 88714663 CTGGCTCATATGTTGAAGG 57 88716249 88716267 ATATAACCAGGGCTGACTG 58 NA DesignNoJunction Mus musculus 50 1700124K17Rik ENSMUSG00000033237 ENSMUST00000096250,ENSMUST00000058749,ENSMUST00000109233 2 3 4 80 15 96192064 96192174 GGCTCATGAAGATACACCA 59 96192218 96192236 TCGATGTCATTAATGCCCA 59 NA Mus musculus 50 Adamts15 ENSMUSG00000033453 ENSMUST00000065112 2 1 1 153 9 30712238 30712359 GTACTAGCACCTAAGGTGG 58 30712103 30712122 TCTTATTGTCTCCACCACAC 59 NA Mus musculus 50 Exoc6b ENSMUSG00000033769 ENSMUST00000046353,ENSMUST00000046334,ENSMUST00000051531 3 3 4 80 6 84805519 84805538 CTACTGTTCTGATCCAAACC 57 84804782 84805476 AAACCATACACCTGAAGTG 57 NA Mus musculus 50 Hdlbp ENSMUSG00000034088 ENSMUST00000042498 1 1 1 80 1 95314091 95314109 TCATAGGAAAGGAGGATGC 58 95313952 95314047 CTTCAACCACATTCTCCAG 58 NA Mus musculus 50 Tiparp ENSMUSG00000034640 ENSMUST00000047906 1 1 1 81 3 65336097 65350138 TGAAGTATGGAGGACAAGAC 58 65350179 65350200 CTTCGTAGTTGGTCAAATTCAG 59 NA Mus musculus 50 Art3 ENSMUSG00000034842 ENSMUST00000058129,ENSMUST00000113087,ENSMUST00000038654,ENSMUST00000113083 2 4 4 94 5 92817226 92821501 GACATCTTCCAGGTGAAGG 59 92821558 92821577 TACTTCGATTCCATTCTGCT 58 NA Mus musculus 50 Tbxa2r ENSMUSG00000034881 ENSMUST00000105325 1 1 1 82 10 80795934 80795952 GGTGGAGATGATGGTTCAG 59 80795998 80797219 TCTGCATGATGAAGACCAG 59 NA Mus musculus 50 Pip5k1c ENSMUSG00000034902 ENSMUST00000045469,ENSMUST00000105327,ENSMUST00000105326 3 3 3 81 10 80769160 80770239 ATGACTATTTGTACTCCCTGTG 59 80770281 80770299 GTGACGTAGAAGACAGAGC 59 NA Mus musculus 50 Vat1 ENSMUSG00000034993 ENSMUST00000040430 1 1 1 86 11 101321927 101323525 AGTTGTCACTTACGGAATGG 59 101321860 101321878 CTGAACTGATTCCACCAGG 59 NA Mus musculus 50 3110001I20Rik ENSMUSG00000035093 ENSMUST00000053699 3 1 1 84 2 125597199 125597217 AAAGAAACAAGCGCAACAG 59 125594058 125597152 CTGATGGGAAATCAGTTTGC 59 NA Mus musculus 50 Rims4 ENSMUSG00000035226 ENSMUST00000109391,ENSMUST00000044734 2 2 2 171 2 163744327 163744345 CTCCTTCGATGATGAGGAC 59 163691631 163704839 ATAGTTAAGGTTGCCCTCTG 59 NA Mus musculus 50 4930524J08Rik ENSMUSG00000035364 ENSMUST00000046721 1 1 1 60 5 100408118 100408137 TTTAAAGAGGACCGGAAGTG 59 100408160 100408178 CCTTGTTCTCGATGGTACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dennd4a ENSMUSG00000035492 ENSMUST00000038890 1 1 2 80 9 64754757 64754775 TTTGTGGCAATCTCTTCCT 59 64754816 64754926 TGGACTTCAAGAAATATCTCCC 59 NA Mus musculus 50 1100001E04Rik ENSMUSG00000036198 ENSMUST00000114904,ENSMUST00000042444 1 2 2 83 X 46849033 46849291 AGAAACATGGCTTAAGCTC 57 46849618 46849636 TGTCAAATAACTCACGGAG 57 NA Mus musculus 50 Serbp1 ENSMUSG00000036371 ENSMUST00000042990 2 1 1 83 6 67222212 67222822 GATGAATTAACAGAGTCACCC 58 67222864 67222885 CTCAGTCACATTTGATTGATCC 59 NA Mus musculus 50 2310002J15Rik ENSMUSG00000036731 ENSMUST00000043379,ENSMUST00000114356 3 2 2 60 2 25094902 25094921 TTCCTTCTTCATCTTCCTCC 58 25094861 25094879 TCTGGGATACATGTTCCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1700010C24Rik ENSMUSG00000036800 ENSMUST00000022953 3 1 1 80 15 71280956 71282777 TGGTTAGTACTGGTTTGTGG 59 71280895 71280913 CAGCATTATCCCTGAAGGT 59 NA Mus musculus 50 H2-M10.5 ENSMUSG00000037246 ENSMUST00000041531 2 1 1 114 17 36910425 36910682 AATGGACGATTATCACACCC 59 36910756 36910777 CAGGTATAAGTCATCATAGCCA 59 NA Mus musculus 50 Endod1 ENSMUSG00000037419 ENSMUST00000041780 1 1 1 71 9 14162315 14185116 AGATTGATGACCCTGACAG 58 14162262 14162280 GATTGTCCACTGAGGTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Taar9 ENSMUSG00000037424 ENSMUST00000041180 1 1 1 60 10 23828684 23828704 ATGGTGTTTCTATATGGTCGG 59 23828644 23828662 CCTCTATCTTCCTAGCCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ppfia1 ENSMUSG00000037519 ENSMUST00000093967 1 1 1 80 7 151670797 151670818 CTGAGAAGGCTAAATTATGACC 58 151668330 151670756 CACAAGCACATCTCTTGTC 58 NA Mus musculus 50 Adh4 ENSMUSG00000037797 ENSMUST00000013458 2 1 1 84 3 138082224 138082242 TAGTCCTTGGTCATGAGTG 58 138082290 138083604 GGGATTACTTTGTCACCTG 57 NA Mus musculus 50 Nod1 ENSMUSG00000038058 ENSMUST00000060655 1 1 1 80 6 54889376 54893137 TCACGGTTATCAGACTCAG 58 54889314 54889335 TCTTATACTTGGTCAGTTCCTC 58 NA Mus musculus 50 Tapbpl ENSMUSG00000038213 ENSMUST00000043422 2 1 1 82 6 125180623 125180641 AAGGCATCACAGATTTCCA 59 125180422 125180577 CTGTACCAAGTCCACTGAG 59 NA Mus musculus 50 Lace1 ENSMUSG00000038302 ENSMUST00000041024 1 1 1 80 10 42146339 42146358 GCATATGTGGAAACGAAGAG 58 42145101 42146296 AAGGTGGTGTATCCTTCTG 58 NA Mus musculus 50 Mbd3l1 ENSMUSG00000038691 ENSMUST00000069218 1 1 1 85 9 18283666 18289018 TTTACAAGGGCTAATAACGG 57 18289066 18289084 TAAACAAGGCTTTGATGGG 57 NA InUTR Mus musculus 50 Omt2b ENSMUSG00000038750 ENSMUST00000113374 1 1 2 226 9 78176064 78176339 ATTGTTTGATTTGAGGCCG 59 78176802 78176820 AGAATCCGTTCCTCTAGAG 57 NA DesignNoJunction, InUTR Mus musculus 50 Pogz ENSMUSG00000038902 ENSMUST00000107270,ENSMUST00000042402 3 2 2 218 3 94660095 94660113 TCTTGTCACACTAATTGCC 57 94664889 94666357 CTTACAGGAAATCCCTGGG 59 NA DesignRelaxed Mus musculus 50 Nrn1 ENSMUSG00000039114 ENSMUST00000037623 2 1 1 122 13 36822065 36822083 TGATGCAGTCTTTAAGGGC 59 36818711 36821979 AAATCCTCCCAGTATGTGC 59 NA Mus musculus 50 Vstm2b ENSMUSG00000039257 ENSMUST00000044705 3 1 1 94 7 48155477 48155495 GATTCAGTGGTGGTACCTC 59 48155551 48156632 CCTTATTTGTTACCTTGCTCC 58 NA Mus musculus 50 5730528L13Rik ENSMUSG00000039693 ENSMUST00000061135,ENSMUST00000064807,ENSMUST00000107704,ENSMUST00000107705 3 4 4 82 4 48565638 48565656 ACTGTACTTCCTTCAGAGC 58 48565702 48573733 TTGAAACAGCAAAGGACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Alkbh4 ENSMUSG00000039754 ENSMUST00000041100,ENSMUST00000100568 2 2 2 96 5 136615395 136616056 GGAAGAAGCAGGACTATGG 59 136616116 136616134 ACTACCTTCTGGCTAAAGC 58 NA Mus musculus 50 Wfdc3 ENSMUSG00000039951 ENSMUST00000043448 1 1 1 60 2 164569519 164569538 TATTGATGCTGAAACACTCC 57 164569478 164569496 TTAAGCCTGACACCATGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr176 ENSMUSG00000040133 ENSMUST00000039160 2 1 1 80 2 118109695 118109713 GGTGCTCAAATTCCTACAC 58 118106082 118109651 GAATAGTACCTGTCCAGGG 58 NA Mus musculus 50 Hs2st1 ENSMUSG00000040151 ENSMUST00000043325 3 1 1 95 3 144097667 144098434 ACCGTACAGGAAAGAAATCTC 59 144097592 144097610 TCCAAATGTCAGACTGCTG 59 NA Nonspecific Mus musculus 50 Thbs1 ENSMUSG00000040152 ENSMUST00000039559 2 1 1 84 2 117944868 117944886 GATGGTAGCTGGAAATGTG 58 117944934 117945067 CTTCTTTGCACTCATCGAC 58 NA Mus musculus 50 1700034J05Rik ENSMUSG00000040163 ENSMUST00000111622 1 1 2 93 6 146901474 146901492 CTTGTCCAAGCAAAGATCC 58 146901011 146901418 TCTTATCTCCACAACTTCGT 58 NA Mus musculus 50 5330417C22Rik ENSMUSG00000040412 ENSMUST00000106625,ENSMUST00000048012 1 2 2 99 3 108262672 108262690 CATCATGGAAGGAGAGGAC 59 108261375 108262609 ATCAGGAGTCCTCTTGGAG 59 NA Mus musculus 50 Tlr8 ENSMUSG00000040522 ENSMUST00000049023,ENSMUST00000112170 3 2 3 60 X 163682961 163682979 CATCCATCCACATACATCC 57 163682919 163682940 AGGTTTAGATAGAGAAGTTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ppp1r14c ENSMUSG00000040653 ENSMUST00000043374 2 1 1 85 10 6920797 6922972 AAATTACAGGAAGCTCTCGT 59 6883109 6883127 TTCCTCATGCCTCTTATCC 58 NA Mus musculus 50 Sunc1 ENSMUSG00000040985 ENSMUST00000102909,ENSMUST00000043377,ENSMUST00000093334 2 3 3 80 11 8929375 8929393 GTACACAATCACAGCTTGC 59 8928112 8929334 TGACATTTCCTCATCTAGAACG 59 NA Mus musculus 50 Cyyr1 ENSMUSG00000041134 ENSMUST00000114174,ENSMUST00000040094 3 2 2 160 16 85545168 85550298 TGCTCTTTGTTTATGCAGG 58 85465897 85465915 GAACACGATTCCAAACACG 59 NA DesignNoJunction Mus musculus 50 Pcf11 ENSMUSG00000041328 ENSMUST00000040360 3 1 2 80 7 99807368 99808318 GTATCAAGAAGGTGTACGAG 57 99807307 99807327 GAATCTTCATATCTAGGTCGC 57 NA Mus musculus 50 Mdfic ENSMUSG00000041390 ENSMUST00000101663 3 1 2 88 6 15691096 15720217 GTGAACTTGTCAGAACCCA 59 15720267 15720287 CTTTATCTTGCCTGTTTCCTC 58 NA Mus musculus 50 D11Wsu99e ENSMUSG00000041629 ENSMUST00000042319,ENSMUST00000100250 1 2 2 105 11 113538695 113538713 AGGAGAAGAAATGGCAGTG 59 113524848 113538626 TGCTTGAAGACTCTGTGTC 59 NA Nonspecific Mus musculus 50 Sp9 ENSMUSG00000041762 ENSMUST00000112044,ENSMUST00000112043,ENSMUST00000076463,ENSMUST00000112045,ENSMUST00000112042,ENSMUST00000048504 2 6 6 80 2 73219929 73219947 AGCAAAGCTGGACTATTCC 59 73212058 73219888 GTACAGAGCTTCAACTATAGGG 59 NA Mus musculus 50 Flg ENSMUSG00000041991 ENSMUST00000090856,ENSMUST00000107294 1 2 7 80 3 93133149 93133167 ACATAACTCAGGGTCAAGC 59 93133210 93133760 TGACCTAAACCAGAAGACTG 58 NA Nonspecific Mus musculus 50 6230427J02Rik ENSMUSG00000042106 ENSMUST00000048568 1 1 1 60 9 107886657 107886675 GACATCTCACGATTTGCAG 58 107886615 107886636 CATTGTAGATAATAGGTTGGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc35f2 ENSMUSG00000042195 ENSMUST00000048670 2 1 1 80 9 53654570 53655858 GAGAAGATAATTCAGGGAGTG 57 53655900 53655918 CGTTAGACACAGCATACAG 57 NA Mus musculus 50 Mkl1 ENSMUSG00000042292 ENSMUST00000100406 3 1 2 94 15 80848748 80848766 CTCCTATGCCAAGATCCTG 59 80848670 80848691 GTAGTTGTAGTTGTTGCTGC 59 NA Mus musculus 50 S100a14 ENSMUSG00000042306 ENSMUST00000048075 2 1 1 129 3 90331100 90331118 CATGATCCATCAGCTCCTG 59 90331211 90331649 AATTCTTGGGCATCCTCAG 59 NA InUTR Mus musculus 50 Dhrs7b ENSMUSG00000042569 ENSMUST00000108718,ENSMUST00000042281 3 2 2 82 11 60666001 60669207 TTCCGATCGGCATATTCAG 59 60669252 60669271 ATGTTAGCCTCTTCCATCTC 58 NA Mus musculus 50 Rnf214 ENSMUSG00000042790 ENSMUST00000085928,ENSMUST00000058720 1 2 3 80 9 45707881 45707899 GAGTGAGAGTGGATCAGGA 59 45706565 45707837 TAAAGTCAGTCTGCACAGC 59 NA Mus musculus 50 Olfr1260 ENSMUSG00000042894 ENSMUST00000111512 3 1 2 214 2 89815039 89816160 TCAGACTTGTAACCTAAGGA 57 89817992 89818010 AAGAGTTTCTGCACATCTG 57 NA DesignNoJunction, InUTR Mus musculus 50 ENSMUSG00000043225 ENSMUSG00000043225 ENSMUST00000059032 1 1 1 60 14 75152913 75152931 TTCAAGATTGGGCATCAGG 59 75152871 75152889 TTGGTTAGCTGGGAAAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gprasp1 ENSMUSG00000043384 ENSMUST00000113147,ENSMUST00000113145,ENSMUST00000113144,ENSMUST00000070053,ENSMUST00000057164 2 5 5 110 X 132332145 132332163 ACTGTCTCAAATCTCTGGA 57 132332395 132332571 TAAAGCAGGACAATCTCCA 58 NA InUTR Mus musculus 50 Adam30 ENSMUSG00000043468 ENSMUST00000050342 2 1 1 60 3 97965292 97965311 GTGGTTGATGAAGAAACAGG 59 97965333 97965352 TACTTATCCTAGCCATCTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Defb13 ENSMUSG00000044222 ENSMUST00000060587 1 1 1 84 8 23057306 23058961 TTCAACTTTACCCAGCCTG 59 23059009 23059027 GTAAAGCACTCAGCTTCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG237300 ENSMUSG00000044624 ENSMUST00000055107 2 1 1 72 10 18504799 18505500 GCACCTCATTTCCTTTGAC 59 18504745 18504763 GCTCTGATGACTCATCCTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Lemd2 ENSMUSG00000044857 ENSMUST00000055117 1 1 1 116 17 27336319 27336337 AACTGTACAACTTCCTGGC 59 27332340 27333092 TGGTCACATTAGCTATGTACTC 59 NA Mus musculus 50 V1rg10 ENSMUSG00000046443 ENSMUST00000062811 3 1 1 60 7 12761830 12761849 TCTCTTTATGCTATGTGCCT 58 12761872 12761890 AGTTATTGGGACTGATGGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gprc5a ENSMUSG00000046733 ENSMUST00000050104 3 1 1 128 6 135029492 135033468 AATCACCCAAGGTCTTGAG 59 135033808 135033826 TAGTCATTGTACGGACTGG 58 NA Mus musculus 50 Zfp41 ENSMUSG00000047003 ENSMUST00000054555 2 1 1 94 15 75450089 75450109 TCTAAAGACAGCAAGTGACTG 59 75454024 75454042 AGAGGTAGACACTGACTCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Defb9 ENSMUSG00000047390 ENSMUST00000057076 2 1 1 60 8 22992389 22995807 AGCTGCCAACTCTATAATCG 59 22992348 22992366 GTACCCTCCTTTCTTGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp235 ENSMUSG00000047603 ENSMUST00000056549,ENSMUST00000098695 2 2 2 130 7 24920319 24922068 AATGACCAAGTTACAGGAGG 59 24922161 24922179 GGTTCAGGAAGTTCTCCAG 59 NA InUTR Mus musculus 50 Pkd1l3 ENSMUSG00000048827 ENSMUST00000109240,ENSMUST00000109242,ENSMUST00000057344 2 3 3 82 8 112191457 112191476 GACTACCAGAGCTTCTTCAG 59 112191520 112193126 AGAGCAATAACCTCCTTGTG 59 NA Mus musculus 50 Trappc1 ENSMUSG00000049299 ENSMUST00000102602 2 1 4 104 11 69137663 69137681 ACTGTCCACAATCTGTACC 58 69137747 69137905 CTTGTACTCCTCTTCCTTAGG 58 NA Mus musculus 50 Tmie ENSMUSG00000049555 ENSMUST00000050958 2 1 1 100 9 110770021 110770039 CGGTATCTACAGCGAAAGG 59 110769449 110769957 TTCTTCTTGTCCTCTCCAG 58 NA DesignRelaxed Mus musculus 50 Taar8a ENSMUSG00000050804 ENSMUST00000051133 1 1 1 83 10 23796651 23796669 TACTCTTCTGTCCTCCACC 59 23796716 23796734 GAACTTGGTGGGATAGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Muc15 ENSMUSG00000050808 ENSMUST00000111016 1 1 3 93 2 110574030 110574050 CCTTGTTGGCTACTTATTGTG 59 110574104 110577569 GGTTGTAGTAACTGGTTCGT 59 NA Mus musculus 50 P4ha3 ENSMUSG00000051048 ENSMUST00000057023,ENSMUST00000077908 1 2 2 110 7 107446456 107446474 GAAGCTGTCAGTCTCTTCC 59 107446547 107449155 ATTTCCTACCTGGAAACAGG 59 NA Mus musculus 50 NP_001034307.2 ENSMUSG00000051050 ENSMUST00000060328 2 1 1 88 18 44190635 44190653 ATAATCCCTGCATCTTGTG 57 44191556 44191688 GTTACCAGGAATCTAGCAC 57 NA InUTR Mus musculus 50 Olfr1491 ENSMUSG00000051156 ENSMUST00000052737 3 1 1 60 19 13779676 13779695 GCAATTATGGCCTATGACAG 58 13779718 13779736 TGATGAGGTTGTAGTGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr424 ENSMUSG00000051528 ENSMUST00000053941 3 1 1 60 1 176067642 176067661 CTCATGTATCTGCGTTTCTC 58 176067684 176067702 TTAGTGCAATAGCTGTGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp664 ENSMUSG00000051911 ENSMUST00000063487 3 1 1 200 5 125343876 125365093 CAGACCTACAAATCCAAGC 58 125381746 125381764 CTTGAAGAGGACCTTCCTC 58 NA DesignNoJunction Mus musculus 50 Phc3 ENSMUSG00000052714 ENSMUST00000064718 2 1 1 60 3 30799217 30799235 TGGGTCTTGGTTTGTACAG 59 30799175 30799194 GCACTTTCCAACAATTTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Krcc1 ENSMUSG00000053012 ENSMUST00000080949 1 1 1 126 6 71232301 71233966 GCCTGATAACGATAATCCCT 59 71234055 71234073 AAGTCTTTGGCTCTAAGCC 59 NA InUTR Mus musculus 50 2310001K24Rik ENSMUSG00000053353 ENSMUST00000065731 3 1 1 86 2 163298528 163298546 CTACTGGCTGAGATCACTG 59 163298595 163298614 ATAAAGAAAGCGAGAATCCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Krt42 ENSMUSG00000053654 ENSMUST00000107406,ENSMUST00000017270 3 2 2 107 11 100125865 100125883 AATCATGAGTACCAGGTGC 59 100124642 100125794 GTATTGAGTAGCCAGGTGG 59 NA Mus musculus 50 ENSMUSG00000054061 ENSMUSG00000054061 ENSMUST00000085008 3 1 2 127 7 100216636 100228408 TAGATCTTGTTGCTCCATAGAG 59 100216530 100216549 AGGACTTGTTTAAAGTCCCT 58 NA InUTR Mus musculus 50 A430110L20Rik ENSMUSG00000054135 ENSMUST00000066988 2 1 1 60 1 183157874 183157892 CCGTATGTCTAAGGTGCTG 59 183157915 183157934 TAGGAGTCTGTCTTGTTCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Klhl5 ENSMUSG00000054920 ENSMUST00000101192,ENSMUST00000031089,ENSMUST00000101191,ENSMUST00000031085 1 4 4 117 5 65535890 65535908 TTCTTGATGAAGCAGCTCC 59 65535988 65539840 CCATGAAATGTTCCATCGTG 59 NA Mus musculus 50 ENSMUSG00000055015 ENSMUSG00000055015 ENSMUST00000068397 2 1 1 170 16 11901665 11903114 AAGTATGTTCCAGGATACCTG 58 11903246 11930526 GACACAGCATCATGAAAGC 59 NA Mus musculus 50 4930502E18Rik ENSMUSG00000055555 ENSMUST00000069209 3 1 1 85 X 51030650 51030668 CAATCCTCTGAAAGCTGAG 57 51030717 51036913 CATTATCCACTGTGACTGC 58 NA Mus musculus 50 BC042720 ENSMUSG00000055567 ENSMUST00000114009,ENSMUST00000050986,ENSMUST00000087318 1 3 5 80 1 66682516 66683507 CATCAGCAATAGACAAGATGAG 58 66683547 66683566 GATGTTTGAGCTGGAAAGTC 59 NA Mus musculus 50 BC042720 ENSMUSG00000055567 ENSMUST00000114009,ENSMUST00000050986,ENSMUST00000087318 2 3 5 80 1 66695548 66695568 GAGAAACCACTGACATATTGG 58 66695608 66696262 TCCCATAGCAGAAATCTAGTG 58 NA Mus musculus 50 1700008P20Rik ENSMUSG00000055826 ENSMUST00000069562 3 1 1 64 7 25118560 25118579 CAGTCTCAACAAAGAGGAGG 59 25118515 25118533 ACATGTTGAAGAGGAACCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr357 ENSMUSG00000055838 ENSMUST00000069578 1 1 1 60 2 36852721 36852741 CCGTTACTCCTCAATACTGAC 59 36852763 36852781 GACATGACATAGAGCCACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Socs6 ENSMUSG00000056143 ENSMUST00000070104 1 1 1 60 18 89023345 89023365 ATGAGTTAGATGGCTCTTCAC 59 89023305 89023326 TTTAGATTCACTCCAAGGATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930458L03Rik ENSMUSG00000056223 ENSMUST00000070216 1 1 1 160 13 65018973 65021034 GCCTCAGATACAGATGACC 59 65021672 65021690 AGTTCAAATGGTGTCCTGG 59 NA DesignNoJunction Mus musculus 50 EG432743 ENSMUSG00000056257 ENSMUST00000070258 3 1 1 61 13 31066385 31066406 TAAGATTTCTCACAGGTCAGAG 59 31066427 31066446 TGCAAATCAATTTGCCACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4933421E11Rik ENSMUSG00000056260 ENSMUST00000098750 3 1 5 107 3 106535967 106535988 AAATCTCGTCCAGAACATAGAG 59 106536056 106537289 ATCTCATACTGCGTCTGTG 59 NA Mus musculus 50 Ms4a4b ENSMUSG00000056290 ENSMUST00000060844 3 1 2 81 19 11529254 11532299 CAATAATGTTCATTGTCTCCGG 59 11532338 11532359 CATACCAAATTACATACCAGGC 59 NA DesignRelaxed Mus musculus 50 Tas2r113 ENSMUSG00000056926 ENSMUST00000079035 3 1 1 60 6 132843111 132843132 TTCTGATAGTCTGCATAGACTG 59 132843151 132843171 CGGATTTGATCCACTAAAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cep110 ENSMUSG00000057110 ENSMUST00000113037,ENSMUST00000028237,ENSMUST00000113033,ENSMUST00000113034,ENSMUST00000045111 2 5 7 97 2 34993240 34993259 AAACTGAGCTAGAGACTCAG 58 34993319 34996015 TTGCTCTAACTGAGTACGC 59 NA Mus musculus 50 V1ri1 ENSMUSG00000057299 ENSMUST00000072632 3 1 1 60 13 22279226 22279245 AACTCTGCTCCAGAAATCAG 59 22279185 22279205 AAAGGAAGCAGGTCATAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 AY761184 ENSMUSG00000058618 ENSMUST00000071886 2 1 1 135 8 22813275 22813918 GCTCTTCAATATGTAGCCCA 59 22813159 22813177 TTTCTTTGCACAATGGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 C030014I23Rik ENSMUSG00000060380 ENSMUST00000080911 3 1 1 78 9 44287199 44287217 CAAACTCCTTTCCCTTTCC 58 44287259 44287277 CCTGAACTTGGAATTTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr601 ENSMUSG00000061200 ENSMUST00000080474 1 1 1 60 7 110507034 110507052 TCCTATGTTCTGATCCTCC 57 110506992 110507011 CTTTAAGACTTGCTTCTCGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1490 ENSMUSG00000061387 ENSMUST00000080162 3 1 1 60 19 13729015 13729033 GCTTCTTTGGAGTTAGCCT 59 13729054 13729075 ACCACAATAAGGATATTCCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Obscn ENSMUSG00000061462 ENSMUST00000020732,ENSMUST00000052872,ENSMUST00000108794 1 3 3 80 11 58891727 58891747 GAGGATGAAGATACGTACACC 59 58891439 58891685 AGTGATGGATTGCTCTTCC 59 NA Mus musculus 50 Dot1l ENSMUSG00000061589 ENSMUST00000105336,ENSMUST00000092291,ENSMUST00000092292 3 3 3 84 10 80249220 80249752 AAAGGTAGTGAGAAGGGTG 58 80249800 80249818 TGAGTGGAATGCTAACAGG 59 NA InUTR Mus musculus 50 Serpinb2 ENSMUSG00000062345 ENSMUST00000009356,ENSMUST00000064916 3 2 2 80 1 109412151 109412169 CATCTCATCAACATTGGCC 58 109412213 109416242 TTAAACTGCAGCACTTTGG 58 NA Mus musculus 50 Gm382 ENSMUSG00000062791 ENSMUST00000096332 1 1 1 183 X 123591658 123594648 GTAATATGCAAGGAGGAAGC 58 123594794 123594812 ACGAACCACATCATTTGGA 59 NA DesignNoJunction, InUTR Mus musculus 50 Olfr1510 ENSMUSG00000063106 ENSMUST00000079459 1 1 1 60 14 53030045 53030064 GGTCTATTCAAACCACTCTG 57 53030004 53030022 TAATCTATTTGGTTGGGCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr800 ENSMUSG00000063452 ENSMUST00000104903,ENSMUST00000076631 1 2 2 60 10 129097266 129097284 AGCAGGATCTGTACAAGAC 58 129097308 129097326 GCAGGATTACAAACAAGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 D630045J12Rik ENSMUSG00000063455 ENSMUST00000078942,ENSMUST00000090291 1 2 2 85 6 38097245 38097263 AAACGTTCTCCTAAGCCAC 59 38097178 38097196 CTGTCTGTGGTGATGAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Arhgap22 ENSMUSG00000063506 ENSMUST00000111956,ENSMUST00000052768 2 2 4 86 14 34176526 34177587 ACATCTGCAAGTTTCTGGA 59 34177637 34177655 TAGGACCAAAGACAGTTGC 59 NA Mus musculus 50 Mro ENSMUSG00000064036 ENSMUST00000025443 1 1 1 90 18 74033050 74036344 TACTGGATGATGAGGACGA 59 74036398 74036416 AATTTCTTCCACCTCCACC 59 NA Mus musculus 50 Olfr786 ENSMUSG00000064245 ENSMUST00000076508 2 1 1 60 10 128874428 128874446 TGTTCAGACACAAAGTTCC 57 128874469 128874488 ACATTAGGGTAAAGACAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Wdr35 ENSMUSG00000066643 ENSMUST00000085745,ENSMUST00000111113 3 2 2 81 12 8992853 8992871 TCCCAGAAGGTAGTCACTC 59 8992916 8994099 TCAAAGTACCCAGATGCTC 58 NA Mus musculus 50 OTTMUSG00000019268 ENSMUSG00000067208 ENSMUST00000112567 1 1 2 85 X 150458124 150466980 CGTTGATACTCGGAGTGTC 59 150458057 150458075 CTGCTAAGCTGCTAAGGAG 59 NA Nonspecific Mus musculus 50 MGI:3588187 ENSMUSG00000067341 ENSMUST00000050325 3 1 1 159 17 34472820 34475761 GAATCTGAGAGCAGGATCAG 59 34475881 34475901 TGTAGTCTTGGAGAAAGTGTG 59 NA InUTR Mus musculus 50 MGI:2442530 ENSMUSG00000067369 ENSMUST00000087541,ENSMUST00000113252 1 2 3 80 X 130797415 130798275 TATACCCTCTCCTACCACC 58 130797353 130797371 GTCTTTGGATTGCCATCTG 58 NA Mus musculus 50 Olfr1428 ENSMUSG00000067524 ENSMUST00000087824 1 1 1 60 19 12183432 12183450 CGAACTTCTCATGATCTCC 57 12183390 12183408 TAAGAGCAGGAAGAACCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Chrac1 ENSMUSG00000068391 ENSMUST00000089765 2 1 1 110 15 72923369 72923387 AGACACTTCAGTTTCTCGC 59 72924025 72924043 TTCCATCGTCCTCATTGTC 59 NA DesignNoJunction Mus musculus 50 Myoz1 ENSMUSG00000068697 ENSMUST00000090469 1 1 1 81 14 21470484 21472858 TGACAGCTCAATGGATCAC 59 21470421 21470439 ATATGAGAAGCCCTGACCA 59 NA Mus musculus 50 Zfp114 ENSMUSG00000068962 ENSMUST00000086010 1 1 2 124 7 24961170 24962772 AATGACCAAGTTACAGGAGG 59 24962859 24962877 TGAAGTTCTCCAGCATCAC 59 NA Nonspecific, InUTR Mus musculus 50 Rdh16 ENSMUSG00000069456 ENSMUST00000071646 3 1 1 206 10 127249992 127250473 GTACCTGGCATCCTATCTG 58 127250643 127250661 GAAGTCCAGTAGAGAAGGG 58 NA DesignRelaxed Mus musculus 50 Art5 ENSMUSG00000070424 ENSMUST00000094128,ENSMUST00000106940,ENSMUST00000106937,ENSMUST00000106938,ENSMUST00000084835,ENSMUST00000106934 1 6 7 75 7 109247987 109248005 GATTCTGGAGGATCTGCTG 59 109247007 109247948 GATAGGAACAGCTCGAACC 59 NA DesignNoJunction Mus musculus 50 Foxe1 ENSMUSG00000070990 ENSMUST00000095097 2 1 1 107 4 46357307 46357325 TCTACAAGTTCATCACCGA 57 46357396 46357414 GGATCTTGAGGAAGCAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4833413O15Rik ENSMUSG00000071019 ENSMUST00000108383 2 1 2 80 4 4003776 4003794 GTGATGTGAAAGTCTTTGC 57 3997155 4003733 CTTCTTTAACCTGATCAGCA 57 NA Mus musculus 50 Gm156 ENSMUSG00000071158 ENSMUST00000095409 3 1 1 87 6 129721696 129721714 GACATGGGATGAGAGTGAG 59 129718206 129721647 CTGAATAAAGTTCTGCTCCTC 58 NA Mus musculus 50 Olfr1357 ENSMUSG00000071185 ENSMUST00000095473 3 1 1 60 10 78074918 78074939 GGGTTATTACTAATCTCCAGTC 57 78074879 78074897 CAGAAGGTTAGTTGAGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pap ENSMUSG00000071356 ENSMUST00000096904 1 1 1 93 6 78321267 78321803 GGTTCAAGGTGAAGACTCC 59 78321860 78321878 CAAGGCATAGCAGTAGGAG 59 NA Mus musculus 50 Olfr1477 ENSMUSG00000071629 ENSMUST00000096201 1 1 1 60 19 13577357 13577376 CACTTCTTCTGTGATATCCC 57 13577399 13577417 CATTTGTGCGAATACTGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Eml3 ENSMUSG00000071647 ENSMUST00000096241 1 1 1 80 19 9011184 9011202 GGGAACATTCTTACCTGGG 59 9011245 9011632 GATCGTGTAGGTCTCTTTGG 59 NA Mus musculus 50 Lrrtm2 ENSMUSG00000071862 ENSMUST00000091636 2 1 1 60 18 35372764 35372785 ACTTATAGAGATCCAACCACTG 59 35372725 35372744 CTCCTACATGGTAACTCGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG544974 ENSMUSG00000072100 ENSMUST00000096852 2 1 1 115 X 151322285 151324688 TGAATTGTGTCTCTGTTCTC 57 151322189 151322207 ATATGCAGCAAAGTAGCCA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 EG546250 ENSMUSG00000072574 ENSMUST00000100643 2 1 1 128 14 44327686 44328389 AGGATTCCTACAGCTTCAC 58 44328481 44328499 CATAGGATGCTTCCTGGTC 59 NA DesignRelaxed Mus musculus 50 2700089E24Rik ENSMUSG00000072704 ENSMUST00000100864 3 1 1 62 6 133055573 133055591 TTCCCGTACTTCTACATCG 58 133055617 133055635 CTAAATGTGTACCTGCAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 A6NAV8_MOUSE ENSMUSG00000072736 ENSMUST00000100885 1 1 1 101 14 7242129 7242149 ATTACTGAATGAGCGAAGG 57 7242046 7242064 GACACAGATGTTCTTGCTG 58 NA DesignRelaxed Mus musculus 50 ENSMUSG00000072769 ENSMUSG00000072769 ENSMUST00000100944 2 1 1 81 5 108801355 108801373 CAGCTTACCCATTTCACTG 58 108801418 108801550 AGTGTACAGTGCATGTCTC 59 NA InUTR Mus musculus 50 A530017D24Rik ENSMUSG00000072847 ENSMUST00000101077 1 1 1 60 11 61679095 61679114 AGAGTACATTTGCAAACCAG 58 61679054 61679072 GAACCACTTGCTTATTGCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 4933437F05Rik ENSMUSG00000072919 ENSMUST00000021423 3 1 1 110 12 88574426 88574445 GTTACTGGCTGTACTTACAG 57 88568044 88574354 GATTCTGCAATAAGTTGCTC 57 NA Mus musculus 50 ENSMUSG00000072936 ENSMUSG00000072936 ENSMUST00000101200 3 1 1 100 5 54741362 54743720 CTCTTGTCTCAGTCCTGTG 59 54743784 54746324 TTCTTGTAGCTCCTTCACC 58 NA InUTR Mus musculus 50 Gm732 ENSMUSG00000073006 ENSMUST00000101290 2 1 1 73 X 105142591 105143650 ACAAGTGTCCGGATATCTC 58 105142536 105142554 ATAAGCATGAGTGGAAGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 9130019P16Rik ENSMUSG00000073067 ENSMUST00000101391 1 1 1 102 6 54353645 54353664 CACATTCAAGGACTTCTTCC 58 54351165 54353580 AAAGGTCTTCAGTGTCTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073607 ENSMUSG00000073607 ENSMUST00000097631 2 1 1 70 18 34381440 34381458 AGTCCAAAGCCTATGACAG 58 34381388 34381406 CTAGTGGAGTCTACGATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073760 ENSMUSG00000073760 ENSMUST00000097894 1 1 1 66 4 123572825 123572843 GAAGGAAGGACAGTGACTC 59 123572777 123572795 ATAGATCACGACTGAAGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Efcab7 ENSMUSG00000073791 ENSMUST00000097959 2 1 2 83 4 99550836 99551278 CATTCTCAAGCAAAGGTGAC 59 99551324 99551342 TGGTCATTGTGAAGGAGAC 59 NA Mus musculus 50 ENSMUSG00000074056 ENSMUSG00000074056 ENSMUST00000098355 1 1 1 65 9 110021015 110021033 GCTTGTGTCAAATCAACCA 58 110021062 110021080 GGTTATGAACACTTGCCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074134 ENSMUSG00000074134 ENSMUST00000098469 3 1 1 105 8 101670629 101670647 AGGTTCATCTCCTGTTCTC 58 101670716 101670734 TCCTTGCATTTCTGGAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 V1rd21 ENSMUSG00000074333 ENSMUST00000098747 1 1 1 60 7 20723579 20723599 CAGGTTTCCCTACTATTTCTC 57 20723539 20723560 AGACAAGGATTCTTAGGATCTC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Hsd3b4 ENSMUSG00000074380 ENSMUST00000058728 2 1 1 60 3 98361315 98367232 GAAGAGGAATTGTCCAAGCT 59 98361274 98361294 GAATGTCTCCCTTCAGTACTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000074598 ENSMUSG00000074598 ENSMUST00000099099 1 1 1 60 3 53657613 53657631 TAGTTCCCACACTTACCAG 58 53657571 53657589 TGAAATGGAGAATGCAGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Lcmt2 ENSMUSG00000074890 ENSMUST00000099486 1 1 2 67 2 120964408 120964426 ATTAATGCTGCACAACCAC 59 120954334 120964377 GACCTCCAATAAGCAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1040 ENSMUSG00000075203 ENSMUST00000099909 1 1 1 60 2 85986423 85986443 CATTTATGGATTCACTGTGGG 59 85986383 85986402 ACAGAATGAGAAGTGGAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 H47 ENSMUSG00000075701 ENSMUST00000101801 2 1 1 80 7 73232094 73232114 GGACCTTCTACTTCATCTGTC 59 73232155 73233669 CGTCAGAGGGTTATAACCAC 59 NA Mus musculus 50 IGKV3-9 ENSMUSG00000076597 ENSMUST00000103398 2 1 1 65 6 70538643 70538661 CCTAGAATCTGGAGTCCCT 59 70538690 70538708 ATGGTGAGAGTGAAGTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV3-2 ENSMUSG00000076602 ENSMUST00000103403 3 1 1 263 6 70648766 70648784 ATTGTGCTGACCCAATCTC 59 70649010 70649029 CATTGCAGTATCATCCTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV6S2 ENSMUSG00000076677 ENSMUST00000103486 2 1 1 61 12 115630111 115630129 CTACTGGATGAACTGGGTC 59 115630068 115630086 TAATTTGAGCAACCCACTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-42 ENSMUSG00000076707 ENSMUST00000103516 2 1 1 62 12 116175433 116175451 GTGGTACTACCTACAACCA 57 116175389 116175408 TGGAGGATTTGTCTACAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-11 ENSMUSG00000076742 ENSMUST00000103551 1 1 1 70 12 117219039 117219057 GATTTATCCTGGAAGCGGT 59 117218987 117219005 TGTCTACAGTCAATGTGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000068293 ENSMUSG00000078094 ENSMUST00000104895 3 1 1 65 16 40071864 40071882 CAGGAGCTACTATATGCCA 57 40071911 40071929 ATCTCTGAGTGGAAGACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 D130079A08Rik ENSMUSG00000078379 ENSMUST00000105171 3 1 1 69 14 104847678 104847697 CTGTAATCAACCCTTCTGGA 59 104847628 104847646 TGTGTTAGTCCTTTGAGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001074754.1 ENSMUSG00000078689 ENSMUST00000107521,ENSMUST00000098041 3 2 4 164 4 59977227 60016858 GGTATCCTGTATGATTAATGGG 57 60016980 60017703 GAGCACTCTTCATCTATAACAG 58 NA Mus musculus 50 0610010B08Rik ENSMUSG00000078888 ENSMUST00000109016,ENSMUST00000109015,ENSMUST00000109014 3 3 3 80 2 175747757 175747776 ATCCTTCTCAGAAGAGTCTC 57 175747816 175748042 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 Drr1 ENSMUSG00000079143 ENSMUST00000110823 1 1 1 139 12 33881042 33894359 ATCCCTTAGAGCTTTCTGC 59 33880315 33880333 GTTCTCCAGACGTTAGGAG 59 NA InUTR Mus musculus 50 1700001E04Rik ENSMUSG00000079378 ENSMUST00000112767 2 1 1 60 14 5236673 5236692 TTTCCATGAAGTTCTCCGAG 59 5236715 5237409 TTCTGCTTGATGCTGTAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 2610042L04Rik ENSMUSG00000079410 ENSMUST00000112820 3 1 1 87 14 3071333 3072026 TCCTACAGCATTAAGGAGG 58 3072077 3072095 GCCTTCTGTTCTCATTCAG 58 NA Nonspecific Mus musculus 50 Ins2 ENSMUSG00000000215 ENSMUST00000105934,ENSMUST00000105932,ENSMUST00000000220 1 3 4 294 7 149865431 149865450 TATTGTTTCAACATGGCCCT 59 149864668 149864686 ACTGATCTACAATGCCACG 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Apbb3 ENSMUSG00000001379 ENSMUST00000115684,ENSMUST00000001415 2 2 2 81 18 36836067 36836085 TGTCATGTGTTTCACTGTG 58 36835897 36836022 TCTCTGACAAGATCTGTGC 58 NA Mus musculus 50 Slc19a1 ENSMUSG00000001436 ENSMUST00000105410 1 1 2 85 10 76507571 76507589 TAGCTACTGCGCTTAAGAC 59 76507638 76512293 GATACGGAACTGATCACGG 59 NA Mus musculus 50 Fkbp10 ENSMUSG00000001555 ENSMUST00000001595,ENSMUST00000107400 3 2 2 99 11 100284905 100285211 CCAGAAGAGTTCTCTTCCT 57 100285274 100285292 GAAACATGTCACTGATGGT 57 NA Mus musculus 50 Dsg4 ENSMUSG00000001804 ENSMUST00000097660 1 1 2 168 18 20621211 20623362 AGACACATCAGAAGACAGC 59 20623494 20623512 CTGAGCTCCCATAGAAACC 59 NA Mus musculus 50 Slc1a5 ENSMUSG00000001918 ENSMUST00000065232 1 1 2 110 7 17375268 17375286 TGGTCTCCTGGATTATGTG 58 17379071 17379091 AGAATGTATTTGCAGGCTG 58 NA Mus musculus 50 Psmc3 ENSMUSG00000002102 ENSMUST00000002171,ENSMUST00000067663 1 2 3 127 2 90894807 90895148 GAGATCAAGATCATGAAGAGTG 58 90895236 90895254 ACATTGGAGACAAGGTACG 59 NA Mus musculus 50 Rgs19 ENSMUSG00000002458 ENSMUST00000108776 2 1 5 195 2 181428140 181428158 CCCTACTGCTTTAGAGCAC 59 181426196 181426214 TGTTTCTCAGCCTCATGTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Tsc2 ENSMUSG00000002496 ENSMUST00000088420,ENSMUST00000097374,ENSMUST00000115292,ENSMUST00000115291,ENSMUST00000115290 2 5 7 81 17 24739092 24739110 CCCTGTACAAGTCATTGTC 57 24738392 24739049 GAAAGAAGCCACTGTATTAGAG 58 NA Mus musculus 50 Crhr2 ENSMUSG00000003476 ENSMUST00000114374,ENSMUST00000095897 3 2 4 114 6 55067408 55067426 ATCAAGTACAACACGACCC 59 55053262 55054727 ACTTTCTCTGCTTGTCATCC 59 NA Mus musculus 50 Dnaja3 ENSMUSG00000004069 ENSMUST00000060067,ENSMUST00000115854 1 2 3 83 16 4693404 4694374 CCTCAGGAATACATCATGGA 58 4694417 4694438 GGTATCCATAATGTTCACAGTG 58 NA Mus musculus 50 Prkacb ENSMUSG00000005034 ENSMUST00000102515,ENSMUST00000005164,ENSMUST00000106140,ENSMUST00000106138,ENSMUST00000106137 3 5 5 81 3 146418650 146418668 TGGAAGAGTCATGTTGGTG 59 146414501 146418607 CTTAACAACCTTCTGCTTGTC 59 NA Mus musculus 50 Tmod4 ENSMUSG00000005628 ENSMUST00000005769,ENSMUST00000107227 3 2 2 81 3 94931338 94931515 AGAAGGCATTAGCAGTGTG 59 94931560 94931578 CTCCTCAATGTTTGTGGGA 59 NA Mus musculus 50 P2rx5 ENSMUSG00000005950 ENSMUST00000006104,ENSMUST00000092929,ENSMUST00000092928 2 3 3 80 11 72980136 72980424 CTTCTCCAAAGCCAATGTG 59 72980468 72980486 CAGTAGAGATTGGTGGAGC 59 NA Mus musculus 50 Atp5g1 ENSMUSG00000006057 ENSMUST00000090541,ENSMUST00000107686,ENSMUST00000107684 1 3 3 148 11 95935349 95936314 TTTCTCCAGCTCTGATTCG 59 95934959 95934977 GACACTGGTCTGGAATTCC 59 NA Nonspecific Mus musculus 50 1700019E19Rik ENSMUSG00000007867 ENSMUST00000110215,ENSMUST00000077560 2 2 3 111 12 87479763 87481007 AAGAGATGGAAGATCACCG 58 87502135 87502153 TGTAGCACAAAGTCTTCCT 58 NA Mus musculus 50 Tle1 ENSMUSG00000008305 ENSMUST00000072695,ENSMUST00000102848,ENSMUST00000107347,ENSMUST00000074216,ENSMUST00000030095 2 5 10 111 4 71819307 71819325 CTGTCTAGTGCTCTGAGTG 59 71806439 71818499 CCAAGAGGGAATTACTCGT 58 NA Mus musculus 50 Elk3 ENSMUSG00000008398 ENSMUST00000008542,ENSMUST00000105291 1 2 2 125 10 92747609 92747627 GAGTTCAAGCTCCTCAAGG 59 92728414 92747521 CTTGATGATGTTCTTGTCGT 58 NA DesignRelaxed Mus musculus 50 Mett10d ENSMUSG00000010554 ENSMUST00000100858 3 1 3 88 11 74617390 74630377 TAGAATCCAAGGGTCACCT 59 74630429 74630447 TCATCACAGACTCCAACAC 59 NA Mus musculus 50 Git1 ENSMUSG00000011877 ENSMUST00000037285 1 1 2 101 11 77314222 77314240 TATCTCTGTGGACGAAAGC 59 77316349 77316529 CAGATCCAAGCTCTGAGAC 59 NA Mus musculus 50 Msh3 ENSMUSG00000014850 ENSMUST00000022220 1 1 3 80 13 93044863 93055840 CACAAGAAGTGCTCTACCC 59 93044801 93044822 CATTAATGCTTGAAGCTCTGAC 59 NA Mus musculus 50 Hnrnpl ENSMUSG00000015165 ENSMUST00000098622,ENSMUST00000038572 2 2 2 115 7 29599090 29599108 CCCATCTACTCCATAACCA 57 29599296 29600126 GAATCAAACTCCACCATAGC 58 NA Mus musculus 50 Mtap2 ENSMUSG00000015222 ENSMUST00000114015,ENSMUST00000024639,ENSMUST00000114013,ENSMUST00000077355,ENSMUST00000114012 1 5 7 80 1 66472036 66472055 CCTGAAGAATGTCAAGTCCA 59 66472096 66480101 GTAACAATTTGTACCTGACCC 58 NA Mus musculus 50 Zfp207 ENSMUSG00000017421 ENSMUST00000053740,ENSMUST00000017567 1 2 3 92 11 80208026 80208616 TATCACTGGAAGAAAGAAGGG 59 80208670 80208688 GTCCAACTGGTGGATTACC 59 NA Mus musculus 50 Shroom1 ENSMUSG00000018387 ENSMUST00000109013,ENSMUST00000018531 2 2 2 181 11 53279751 53279890 CCAAGAAAGTGGAACTAGC 58 53280035 53280053 TAGATCAGTCATGAACCGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Irf1 ENSMUSG00000018899 ENSMUST00000108922,ENSMUST00000108920,ENSMUST00000019043 2 3 3 84 11 53587687 53587856 ATAACTCCAGCACTGTCAC 59 53587901 53587922 TGGTGCTATCTGGTATAATGTC 59 NA Mus musculus 50 Pelp1 ENSMUSG00000018921 ENSMUST00000019066 3 1 2 152 11 70219774 70219792 TCAGTAATGCACATCTTGG 57 70216243 70219134 AATTCAGAAGAACCTGCAG 57 NA Mus musculus 50 Ppp1r12a ENSMUSG00000019907 ENSMUST00000105279,ENSMUST00000070663 3 2 2 80 10 107704468 107705637 TGTTTCCAGGTATGACAGC 59 107705680 107705699 TAACTGTATGAAGCAGAGCG 59 NA Mus musculus 50 Dock2 ENSMUSG00000020143 ENSMUST00000093193 2 1 4 81 11 34158162 34161441 AAAGGAAAGATGTGGGAAGAG 59 34158101 34158120 GCTCGTAGTCAAAGATCTCC 59 NA Mus musculus 50 Ccdc139 ENSMUSG00000020280 ENSMUST00000020520,ENSMUST00000109525,ENSMUST00000058163 2 3 4 80 11 23606932 23607527 AGATTGCCATTTCCTAGGTG 59 23608758 23608777 GCCATTCTGGTAAATACCGA 59 NA Mus musculus 50 Xpo1 ENSMUSG00000020290 ENSMUST00000020538,ENSMUST00000109551,ENSMUST00000102870,ENSMUST00000102869 3 4 5 88 11 23185142 23185160 GTTGGAGAAGTAATGCCGT 59 23185211 23185811 AATGTATGAACCTGCTGAGG 59 NA Mus musculus 50 Nefh ENSMUSG00000020396 ENSMUST00000093369,ENSMUST00000020667 3 2 2 174 11 4845232 4845251 GAGGAGATAACTGAGTACCG 58 4843942 4843960 TGTTTCTCAGCTCACTGTC 59 NA DesignNoJunction Mus musculus 50 Smek2 ENSMUSG00000020463 ENSMUST00000020755,ENSMUST00000101439,ENSMUST00000101438 1 3 4 80 11 29111242 29111612 CAGAAACTGAACAGTGTACC 58 29111653 29111673 TTCTTCATCCTCTTCTAAGGC 59 NA Mus musculus 50 Ggnbp2 ENSMUSG00000020530 ENSMUST00000100685,ENSMUST00000100686 1 2 3 82 11 84654970 84654989 ATGTTTGCTGTGAAACAGAC 59 84653928 84654925 TTCTCTTCGCTCATACCCT 59 NA Nonspecific Mus musculus 50 Tom1l1 ENSMUSG00000020541 ENSMUST00000020849,ENSMUST00000107868 1 2 4 82 11 90532511 90534161 TTAGTCCCAGAACAGATCG 58 90532447 90532466 ATCAATATGGCTGTCATCAC 57 NA Mus musculus 50 Grhl1 ENSMUSG00000020656 ENSMUST00000085553 2 1 2 110 12 25260948 25262888 CTCTATGACTACTACAAGGTCC 58 25266196 25266214 CGTCACATTTGGTATGCTG 59 NA Mus musculus 50 Rhbdf2 ENSMUSG00000020806 ENSMUST00000103028,ENSMUST00000103029 2 2 3 137 11 116462236 116462254 ACTGTAAGATCAAAGGCCG 59 116461797 116461926 TGTCTAAACAGTGCACCTG 59 NA Mus musculus 50 Mink1 ENSMUSG00000020827 ENSMUST00000072237,ENSMUST00000072873,ENSMUST00000102559,ENSMUST00000102558 3 4 5 149 11 70417307 70417325 ATCAAGACTTACCTGAGCC 58 70417437 70417696 CTCTGTCTCCTCTTTCTCAC 59 NA Mus musculus 50 Slc46a1 ENSMUSG00000020829 ENSMUST00000001126,ENSMUST00000116356 1 2 2 61 11 78280674 78280692 GTTTGCTACCATTACACCC 58 78282138 78282156 TGACCAATGACAGGAAGAG 58 NA DesignNoJunction Mus musculus 50 Cacna1g ENSMUSG00000020866 ENSMUST00000100561 3 1 14 123 11 94287173 94287192 GAGAACTTCCATAAGTGCAG 58 94285030 94287087 ACATTAGATCGGCCATCTG 59 NA Mus musculus 50 Gcn5l2 ENSMUSG00000020918 ENSMUST00000100451 1 1 3 81 11 100572209 100572656 CCTCTTCAAGGGTGTACTG 59 100572146 100572164 GAGCTCAAACATTGTCTGG 58 NA Mus musculus 50 Clmn ENSMUSG00000021097 ENSMUST00000109936 1 1 3 92 12 106010167 106011994 AGTGTTAAACAGGACTGGC 59 106010093 106010111 TGTACAAACTGCGTCAGAG 59 NA Nonspecific Mus musculus 50 Numb ENSMUSG00000021224 ENSMUST00000110298 1 1 3 81 12 85152305 85172884 GAGATTGAAAGCTACGGGA 59 85152242 85152260 TTTCTCGTCCACAACTCTG 59 NA Mus musculus 50 Gpld1 ENSMUSG00000021340 ENSMUST00000021773,ENSMUST00000110370 3 2 2 81 13 25071548 25071568 TGTATGTCTACTATGGTTCCC 58 25071611 25071720 TTACAGTAGGTGTCCTTGC 58 NA Mus musculus 50 Catsper3 ENSMUSG00000021499 ENSMUST00000021961 2 1 2 80 13 55887866 55900148 TTCAGAACCTTTGAGTTCCT 58 55900189 55900209 CACATCCAGTATGTTATAGCC 57 NA Mus musculus 50 Mctp1 ENSMUSG00000021596 ENSMUST00000109583,ENSMUST00000046098 3 2 5 80 13 76871063 76896257 CCAGTAAGTTTCAGACCCA 58 76896300 76896319 TGATGCTGACTATTCCTCTC 58 NA Mus musculus 50 Camk2g ENSMUSG00000021820 ENSMUST00000071816,ENSMUST00000080440,ENSMUST00000100837 1 3 4 86 14 21583480 21584090 CCTACGATTTCCCATCACC 59 21583412 21583430 TTGCAGGGTTTATGGTCAG 59 NA Mus musculus 50 Hmbox1 ENSMUSG00000021972 ENSMUST00000067843 2 1 3 133 14 65444519 65445616 CAATATCGCAGCAATCCTG 59 65442502 65442521 GATCTTGGTGGTCACTATGG 59 NA Mus musculus 50 Cdadc1 ENSMUSG00000021982 ENSMUST00000056997,ENSMUST00000022555 2 2 2 81 14 60204930 60204948 CACAATCAGAGTTTGCCAC 59 60200203 60204888 TATGATCCTCAGTTCGATATGC 59 NA Mus musculus 50 Acin1 ENSMUSG00000022185 ENSMUST00000022793,ENSMUST00000111485,ENSMUST00000022794 1 3 5 80 14 55262607 55262626 GATGACCTCTTCCGTAAGAC 59 55261871 55262565 CTCCTTCTGAACAATTTGGC 59 NA Mus musculus 50 6030458C11Rik ENSMUSG00000022195 ENSMUST00000022804 3 1 2 119 15 12747879 12751173 TACCACAACCATCAGAAGC 59 12747778 12747796 ATGGTCACTTCTTGGTGTC 59 NA Mus musculus 50 3930401K13Rik ENSMUSG00000022536 ENSMUST00000115844,ENSMUST00000023189 1 2 2 80 16 5032061 5036342 CAAAGGATGAGAAGGACCTC 59 5032000 5032018 ATTTAAATGCAGCCATCGG 58 NA Mus musculus 50 Pdxdc1 ENSMUSG00000022680 ENSMUST00000115804,ENSMUST00000023361,ENSMUST00000115802 2 3 3 105 16 13872611 13876083 CCTTTGTAATCAGCTTGGC 59 13869951 13869969 CAGTTTCTCGAGAAAGGCA 59 NA Mus musculus 50 Slc7a4 ENSMUSG00000022756 ENSMUST00000063544,ENSMUST00000090165,ENSMUST00000116648 2 3 3 98 16 17574670 17575054 TCTATCTGTGCCATGAACAC 59 17574591 17574609 AAACACCTGGAAGAAGAGC 59 NA Mus musculus 50 Gsk3b ENSMUSG00000022812 ENSMUST00000114750 1 1 2 194 16 38208163 38217203 ATCCTTGGACAAAGGACTC 58 38220180 38220199 GTAGTTTGACATTTGGGTCC 58 NA Mus musculus 50 Cd86 ENSMUSG00000022901 ENSMUST00000089620,ENSMUST00000023618 2 2 2 82 16 36621115 36629063 GATCTCAGATGCTGTTTCC 57 36621051 36621070 TTTGAGCCTTTGTAAATGGG 58 NA Mus musculus 50 Setd4 ENSMUSG00000022948 ENSMUST00000023669,ENSMUST00000113951 3 2 2 80 16 93601926 93601945 GACGAAGAGGAAGAACAGAG 59 93599535 93601886 ATCTGTAGCTCTCATTTACTGC 59 NA Mus musculus 50 Fmnl3 ENSMUSG00000023008 ENSMUST00000081224,ENSMUST00000088233,ENSMUST00000023746 1 3 4 80 15 99153803 99153822 CTACTGAGGAGACTCTTCCT 59 99153303 99153760 GACACTTGTCTGGTAGTGG 59 NA Mus musculus 50 Cypt8 ENSMUSG00000023257 ENSMUST00000115422,ENSMUST00000024026 3 2 2 63 X 16100086 16100104 TTTCGAAGCTTGAGAAGAC 57 16100131 16100149 TTAGAACTAGGGTTTCGCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Anks1 ENSMUSG00000024219 ENSMUST00000097358,ENSMUST00000114842,ENSMUST00000025058 1 3 4 128 17 28113610 28113628 TAGTACGTCTGCTCATCCA 59 28115429 28122023 CATTGTCGTTGTTCTTGGC 59 NA Mus musculus 50 Nr3c1 ENSMUSG00000024431 ENSMUST00000115567,ENSMUST00000115571,ENSMUST00000025300 1 3 5 162 18 39588402 39588420 CAGATGTGAGTTCTCCTCC 59 39584141 39588276 TAATTGTGCTGTCCTTCCA 58 NA Mus musculus 50 Gpr137 ENSMUSG00000024958 ENSMUST00000099782,ENSMUST00000099774,ENSMUST00000025909,ENSMUST00000099776 3 4 4 60 19 7013772 7013790 AGATGCCTTCGATTACGAC 59 7013610 7013629 TAGGTCATTCACCAGATCTG 58 NA DesignNoJunction Mus musculus 50 Lgals12 ENSMUSG00000024972 ENSMUST00000051105 2 1 3 103 19 7672524 7672545 AAATGTCCACCTACTGTGTC 59 7672438 7672456 AGAATGGGCTGTAACTGTG 59 NA Mus musculus 50 Maged2 ENSMUSG00000025268 ENSMUST00000112700,ENSMUST00000112699,ENSMUST00000026302,ENSMUST00000112697,ENSMUST00000112702 3 5 5 80 X 147245266 147245286 CAAATGACTTGGTGAAGTACC 59 147244949 147245226 TGATGTCCTTCAGCATATCTG 59 NA Mus musculus 50 Rplp2 ENSMUSG00000025508 ENSMUST00000084434,ENSMUST00000106004,ENSMUST00000106003 3 3 3 136 7 148634652 148634670 ATTGAGGATGTCATCGCTC 59 148636999 148637146 TCTTTCTTCTCCTCTGCTG 58 NA Nonspecific Mus musculus 50 Cant1 ENSMUSG00000025575 ENSMUST00000017620,ENSMUST00000092378,ENSMUST00000106288,ENSMUST00000106287 2 4 5 84 11 118272222 118272240 CATCTACCAGATCGAAGGC 59 118270188 118272174 AGCTTTGAAACCCTTCTCC 59 NA Mus musculus 50 Arhgef9 ENSMUSG00000025656 ENSMUST00000113876,ENSMUST00000113885,ENSMUST00000113883,ENSMUST00000113882,ENSMUST00000113878,ENSMUST00000113881,ENSMUST00000113880,ENSMUST00000113873 1 8 10 117 X 92247484 92250291 AAACAGAAAGGTGTCAACTC 58 92247386 92247404 CAAACACTTGAGACTGAGC 58 NA Nonspecific Mus musculus 50 Atp5c1 ENSMUSG00000025781 ENSMUST00000026887,ENSMUST00000114896,ENSMUST00000114897 1 3 3 93 2 9985928 9990245 GTTCTTTGGCTCTGTATGAG 58 9985854 9985872 CAAAGCCCTCTATCTGAGG 59 NA Mus musculus 50 Fn1 ENSMUSG00000026193 ENSMUST00000055226,ENSMUST00000097700 3 2 3 85 1 71651601 71651619 GTGGAGTACGTGGTTAGTG 59 71650494 71651552 CGATCAATGTTGGTCACTG 58 NA Mus musculus 50 Eif4e2 ENSMUSG00000026254 ENSMUST00000076362 1 1 6 90 1 89122727 89122745 GAATCCGGGATACTCTTCG 59 89122798 89134429 GAATTGTCCTTGATGCTGTC 59 NA Mus musculus 50 Chit1 ENSMUSG00000026450 ENSMUST00000027719,ENSMUST00000112256,ENSMUST00000086475,ENSMUST00000112259 2 4 4 113 1 136045088 136045960 CTTACTATGAGGCCTGCTC 59 136046037 136046055 CTTTGAAGCTTTCCACGTC 59 NA Mus musculus 50 Lcn5 ENSMUSG00000026937 ENSMUST00000028306 3 1 3 172 2 25516200 25516221 ACTGTGATTGATATCACCTCTC 59 25516508 25516611 ACACAGGTTAAGTCATGCT 58 NA Mus musculus 50 Baz2b ENSMUSG00000026987 ENSMUST00000112550,ENSMUST00000112548,ENSMUST00000112553,ENSMUST00000090925 3 4 4 80 2 59807320 59807338 GGAGGAGAGTGAAGATGAC 58 59807063 59807278 ATACCATGTAATAGCACCTGG 59 NA Mus musculus 50 Cd82 ENSMUSG00000027215 ENSMUST00000028644,ENSMUST00000099696,ENSMUST00000111257 1 3 5 80 2 93270151 93270169 TCTTCCTTCTGCTGATCCT 59 93262073 93270107 TCTCCTTCTTCAGCTTGTC 58 NA Mus musculus 50 4930402H24Rik ENSMUSG00000027309 ENSMUST00000103190 3 1 6 167 2 130539230 130545585 TTGTCACAAGGTATGAAGGT 58 130538712 130538731 TGTGGTAGATGTTTCCAGAG 59 NA Mus musculus 50 2310003L22Rik ENSMUSG00000027384 ENSMUST00000044825,ENSMUST00000028863 3 2 2 81 2 140014579 140014597 TTCTCCTTTCACTGCTGTC 59 140014640 140019330 TTCATCAGTATCCACAGTCAG 59 NA Mus musculus 50 Rpo1-2 ENSMUSG00000027395 ENSMUST00000028874 3 1 2 188 2 128943816 128943834 CATTGGAACCATGGAACAG 58 128944926 128945882 TACACCTGTAATCCCATCTG 58 NA Mus musculus 50 Mbnl1 ENSMUSG00000027763 ENSMUST00000029327,ENSMUST00000099087 3 2 3 137 3 60425348 60425367 CAATATTGTGCATGACACCC 59 60426154 60429055 TTATGGGTATCTGGTTGGC 59 NA Mus musculus 50 Ccnl1 ENSMUSG00000027829 ENSMUST00000029416,ENSMUST00000029415 2 2 2 97 3 65760876 65761432 CAGTTTCGAGATTGTTGCT 58 65760797 65760818 GGTGGTGGAATACATTAATCAC 59 NA Mus musculus 50 Trim2 ENSMUSG00000027993 ENSMUST00000107692,ENSMUST00000107691,ENSMUST00000107695,ENSMUST00000107693,ENSMUST00000107694,ENSMUST00000065380,ENSMUST00000054990 3 7 7 103 3 83994504 83994522 CAGAAGGCTGTGAAGAGAC 59 83982085 83994438 TTTCTTCCTTTGGTACCGAC 59 NA Mus musculus 50 Trim2 ENSMUSG00000027993 ENSMUST00000107692,ENSMUST00000107691,ENSMUST00000107695,ENSMUST00000107693,ENSMUST00000107694,ENSMUST00000065380,ENSMUST00000054990 2 7 7 102 3 83994504 83994522 CAGAAGGCTGTGAAGAGAC 59 83982086 83994438 TTCTTCCTTTGGTACCGAC 59 NA Mus musculus 50 Polr3gl ENSMUSG00000028104 ENSMUST00000091924,ENSMUST00000029746 3 2 2 82 3 96383994 96384012 GGACCACCATTATCCTTCC 59 96383826 96383950 CTCTAGCGTCTCTAGTTTCTG 59 NA Mus musculus 50 Lphn2 ENSMUSG00000028184 ENSMUST00000106127 1 1 4 151 3 148484342 148484363 GCAATTACCTACTAACAAACCC 59 148480879 148483421 GTTCAGTGAATGTCTTGTCTC 58 NA Mus musculus 50 Ubap2 ENSMUSG00000028433 ENSMUST00000108068,ENSMUST00000030143,ENSMUST00000108066,ENSMUST00000108067 1 4 4 80 4 41156597 41158751 CTCCTCAGAGTTTGTCATCC 59 41156536 41156554 GGGAGTTGGAGATGTTCAC 59 NA Mus musculus 50 Mllt3 ENSMUSG00000028496 ENSMUST00000097993,ENSMUST00000030219,ENSMUST00000078090 2 3 5 80 4 87428237 87428257 TCTAGATGAGTTGGTAGAGCT 59 87420037 87428196 ATAAGGTTCACGATCTGCTG 59 NA Mus musculus 50 0610037L13Rik ENSMUSG00000028608 ENSMUST00000106727,ENSMUST00000106726,ENSMUST00000030347,ENSMUST00000030346,ENSMUST00000106725 1 5 5 68 4 107564605 107564623 CAGAAGTGCAAGCTATGTG 58 107564840 107564858 GTTGTAAGCCTTGATGGTG 58 NA DesignNoJunction Mus musculus 50 2810410C14Rik ENSMUSG00000028621 ENSMUST00000106756 2 1 5 171 4 106743144 106743484 GACCTTGAGAGCTGTTCTG 59 106743617 106746491 CATCTACTACACCTCGTAGGA 59 NA Mus musculus 50 Kif17 ENSMUSG00000028758 ENSMUST00000105818,ENSMUST00000030539,ENSMUST00000105819,ENSMUST00000105820 3 4 5 112 4 137837373 137842356 ATCCGAGAGGAGTATGAGG 59 137842432 137842450 TCATACGAGTTACGCATGG 59 NA Mus musculus 50 Adc ENSMUSG00000028789 ENSMUST00000084272 2 1 4 112 4 128611780 128611798 GTCTTTGACAACATGGGTG 58 128608180 128611705 TAATATTTCCAGGAGCAGGC 59 NA Mus musculus 50 Adc ENSMUSG00000028789 ENSMUST00000084272 3 1 4 115 4 128611783 128611801 CTGGTCTTTGACAACATGG 58 128608180 128611705 TAATATTTCCAGGAGCAGGC 59 NA Mus musculus 50 Dnajc2 ENSMUSG00000029014 ENSMUST00000115193,ENSMUST00000115195,ENSMUST00000030771 1 3 4 80 5 21267407 21267425 GGTCAGAAGATGATCTGCA 59 21266531 21267364 CAATGACTTCCCATCTTGAG 58 NA Mus musculus 50 Plac8 ENSMUSG00000029322 ENSMUST00000097437,ENSMUST00000112910,ENSMUST00000031264 3 3 3 82 5 100988823 100988843 CATGAATGAGTGTTGTCTGTG 59 100985605 100988780 AAATAGATCCAGGAATGCCG 59 NA Mus musculus 50 Iqcd ENSMUSG00000029601 ENSMUST00000069259,ENSMUST00000094391 2 2 2 117 5 121050749 121050767 TTCATACAGGACATCAGCC 59 121052335 121052353 CAAAGTTCTCCTTCTCCAC 57 NA DesignNoJunction Mus musculus 50 Pot1a ENSMUSG00000029676 ENSMUST00000115330,ENSMUST00000115329 1 2 3 80 6 25706213 25706231 ACTGAGATCCTATTTGCCC 58 25703343 25706172 GGAACTTCTTGTACTGAATGAC 59 NA Nonspecific Mus musculus 50 1700034O15Rik ENSMUSG00000029867 ENSMUST00000031900 2 1 1 60 6 41635228 41635249 GAGTATGAAGAACACTTTGAGG 58 41635269 41635288 CCATATCTATCTCCTGCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Adamts9 ENSMUSG00000030022 ENSMUST00000113438,ENSMUST00000049189 2 2 2 83 6 92746228 92746352 CGCTAAAGGTATTCTGTGC 58 92746163 92746181 AGAAGTTCTCTGAGTCACC 58 NA Mus musculus 50 Grin2b ENSMUSG00000030209 ENSMUST00000111905,ENSMUST00000053880 3 2 2 80 6 135873478 135993917 GCAGATAAGGATGAGTCCTC 59 135873417 135873436 CATGATGTTGAGCATGACAG 59 NA Mus musculus 50 Prmt3 ENSMUSG00000030505 ENSMUST00000107607,ENSMUST00000085271,ENSMUST00000032715 3 3 3 119 7 57035705 57035724 TTTCACACTGTAAGTTGGAG 57 57036533 57037324 CAACCGTAGGATTCTTAAGTC 58 NA Mus musculus 50 Micalcl ENSMUSG00000030771 ENSMUST00000033033 1 1 2 94 7 119538308 119538329 GAGAAGATACTCAGAAGAAGGA 58 119538384 119538609 TGCAGGATACAAACCTGAG 59 NA Mus musculus 50 Micalcl ENSMUSG00000030771 ENSMUST00000051308 3 1 2 82 7 119554963 119556320 AAATGCTCAAGGATGAGGG 59 119556366 119556384 AATCACCTGCATCATCTCC 59 NA Nonspecific Mus musculus 50 Gp2 ENSMUSG00000030954 ENSMUST00000079898,ENSMUST00000033255 3 2 2 80 7 126598152 126600683 TACATCAAGGTTATGGGAGG 58 126598091 126598109 TTCCAGAACTTGGAGAGTC 58 NA Mus musculus 50 A930008G19Rik ENSMUSG00000030956 ENSMUST00000097999,ENSMUST00000065371,ENSMUST00000106169,ENSMUST00000106168 3 4 8 98 7 139951138 139951156 TGACAAGAAGATCGGTGTG 59 139907672 139951076 AAGGTCTGACAGTTCTGTG 59 NA Mus musculus 50 Slc25a14 ENSMUSG00000031105 ENSMUST00000114938 2 1 4 84 X 45978790 45978808 AACCAGAATTTCCTGACCA 58 45981351 45982437 TTTCTGATGTAGTCGTGGC 59 NA Mus musculus 50 Otud5 ENSMUSG00000031154 ENSMUST00000115666,ENSMUST00000115668,ENSMUST00000115665,ENSMUST00000033494 1 4 5 81 X 7444942 7445061 TAGCACAGAACCTATCAACAC 59 7445104 7445122 GATATTCCGGTGGTAGCTG 59 NA Mus musculus 50 Otud5 ENSMUSG00000031154 ENSMUST00000115666,ENSMUST00000115668,ENSMUST00000115665,ENSMUST00000033494 2 4 5 86 X 7444942 7445061 TAGCACAGAACCTATCAACAC 59 7445109 7445127 TAGTGGATATTCCGGTGGT 59 NA Mus musculus 50 Porcn ENSMUSG00000031169 ENSMUST00000077595,ENSMUST00000082320,ENSMUST00000089403,ENSMUST00000089402,ENSMUST00000115602 3 5 5 125 X 7776272 7776370 TTATGTGGAACATGTCCTCAG 59 7775186 7775204 AAGTTTAAGGCTCGTACCC 59 NA Mus musculus 50 Bmx ENSMUSG00000031377 ENSMUST00000112265,ENSMUST00000015547,ENSMUST00000112263 1 3 3 80 X 160641183 160643115 CATACATCGAGATTTGGCTG 58 160641122 160641140 CTCGTCATTCCAAAGTCTG 58 NA Mus musculus 50 Ank1 ENSMUSG00000031543 ENSMUST00000110688,ENSMUST00000084037,ENSMUST00000110685 3 3 6 178 8 24220187 24221836 TGTCTGAAGATGAAGGTGAC 59 24222330 24222348 TTCAGATCGGATCACAACG 59 NA Mus musculus 50 Gins3 ENSMUSG00000031669 ENSMUST00000034094 2 1 1 71 8 98161921 98161939 ATATTTCCCAGTCTCTGCT 57 98167037 98167055 AAGAATTCTGGGAGGAGTC 58 NA DesignNoJunction Mus musculus 50 Nudt7 ENSMUSG00000031767 ENSMUST00000066514 3 1 3 288 8 116657543 116657561 TAAGAGGAAGTACTGCAGG 57 116675607 116675625 TTCATCAGCATTAGGTTGG 57 NA DesignNoJunction Mus musculus 50 Gpr83 ENSMUSG00000031932 ENSMUST00000115626,ENSMUST00000115625,ENSMUST00000034408,ENSMUST00000115624 3 4 4 80 9 14671419 14672631 AAGTACAGTGAGGACATTGTG 59 14672671 14672691 GTCCAGATACTTCCAGAAGAG 59 NA Mus musculus 50 Usp2 ENSMUSG00000032010 ENSMUST00000034508,ENSMUST00000114830 3 2 3 188 9 43884126 43884145 GAGAACTATGGTCGAAAGGG 59 43884294 43897223 CTTTGAATTCATGGTGTCTCG 59 NA Mus musculus 50 Tmed1 ENSMUSG00000032180 ENSMUST00000034698,ENSMUST00000098951 2 2 2 98 9 21312822 21313382 ACATCAAGGAATCCATAGAGAC 59 21312745 21312763 GAAGATTTCGATCACGAGC 58 NA Mus musculus 50 Chrna3 ENSMUSG00000032303 ENSMUST00000034851,ENSMUST00000114316 1 2 2 89 9 54872111 54872130 CAGTTTGAGGTGTCTATGTC 57 54870087 54871962 ATTCCAGATTTGCTTCAGC 58 NA Mus musculus 50 Smarcc1 ENSMUSG00000032481 ENSMUST00000035057,ENSMUST00000088716,ENSMUST00000111971,ENSMUST00000111969 2 4 5 214 9 110124457 110124475 AATATGCTGAACTACGTGC 57 110124653 110137391 TGGTATTTGACCTGGTTGG 59 NA DesignRelaxed Mus musculus 50 Ankrd15 ENSMUSG00000032702 ENSMUST00000078392 1 1 2 151 19 25496804 25496822 GATGACCAGATAGCCACTG 59 25497514 25500401 TCACTTAGTTCATACCCGC 59 NA Mus musculus 50 Arhgef17 ENSMUSG00000032875 ENSMUST00000107032,ENSMUST00000037681 1 2 2 80 7 108031029 108031302 GATGGTTATTGAAGTGAAGGC 59 108030969 108030987 GTGGTACAGACAATGAGGT 58 NA Mus musculus 50 Resp18 ENSMUSG00000033061 ENSMUST00000039534,ENSMUST00000067014 3 2 2 95 1 75270599 75270617 CAACAGTCAAGGTGAACAG 58 75268927 75270541 CAAAGAAACCCTTGGTAGGA 59 NA Mus musculus 50 Cst10 ENSMUSG00000033156 ENSMUST00000109938,ENSMUST00000047008,ENSMUST00000109939 1 3 3 60 2 149231257 149231276 GAAAGTGGTAAAGTTTGCTG 57 149231297 149231317 GCTAAGATACAGGTCATTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Trim45 ENSMUSG00000033233 ENSMUST00000094048,ENSMUST00000106984,ENSMUST00000106980,ENSMUST00000066553,ENSMUST00000037409 2 5 5 82 3 100729526 100729545 AAGGCTATGAAGTGTATGGG 59 100729590 100731158 TCTGTGGAGATCTTCTCCC 59 NA Mus musculus 50 EG333669 ENSMUSG00000033255 ENSMUST00000099577,ENSMUST00000037672 2 2 2 92 10 75439147 75441057 ATGTATACCATCACAGGTGG 58 75441112 75441130 ACCCATTAACAAGGCTGAG 59 NA Mus musculus 50 Stk36 ENSMUSG00000033276 ENSMUST00000087183,ENSMUST00000042446,ENSMUST00000113699,ENSMUST00000113694,ENSMUST00000087186 3 5 5 131 1 74648761 74649715 AAATACAGTGCTCAGGTGG 59 74649809 74649828 GAGCATATGCACAATGTTGG 59 NA Mus musculus 50 Foxh1 ENSMUSG00000033837 ENSMUST00000037824 3 1 1 260 15 76499669 76499687 ACCTTTCCTCTAATCGGTG 58 76499339 76499357 ACTTGATGCTGAAACCCTC 59 NA DesignNoJunction Mus musculus 50 Grip1 ENSMUSG00000034813 ENSMUST00000041962 2 1 5 84 10 119334777 119334796 GTCCCTACACTAAATCTGCC 59 119334843 119366966 TTGAATTCCTCTGGGATGC 59 NA Mus musculus 50 Cobll1 ENSMUSG00000034903 ENSMUST00000112431,ENSMUST00000102726,ENSMUST00000072921,ENSMUST00000112422,ENSMUST00000068356 3 5 9 81 2 64941441 64943779 CTTGACCTCTGGTGTAAGC 59 64941378 64941396 CGGATCTTTAGATGCCTCG 59 NA Nonspecific Mus musculus 50 Ankrd11 ENSMUSG00000035569 ENSMUST00000098334 3 1 2 116 8 125423703 125423892 TGCAAATAGTCCGGTAGAC 59 125423605 125423625 CGTTCATTTCTCTTGTTCACC 59 NA Mus musculus 50 Dnajb5 ENSMUSG00000036052 ENSMUST00000037872,ENSMUST00000098112,ENSMUST00000084662,ENSMUST00000107973 2 4 4 81 4 42966235 42966253 GTACGACCAGTATGGTGAG 59 42969437 42969456 AAAGGTGTAGTGAAAGGAGC 59 NA DesignNoJunction Mus musculus 50 Arl5a ENSMUSG00000036093 ENSMUST00000036541 1 1 1 60 2 52260442 52260460 CATATTCAAGCATGTTGCG 57 52257927 52257946 TCATCCATTCAAGTCCTTGG 59 NA DesignNoJunction Mus musculus 50 Jmjd4 ENSMUSG00000036819 ENSMUST00000045279,ENSMUST00000108777 2 2 2 81 11 59264277 59264297 CTACATCCAAGGGAGTTACTC 59 59264340 59267028 ATTCACCAAGGAGTCTCTG 58 NA Mus musculus 50 Ovol2 ENSMUSG00000037279 ENSMUST00000037423,ENSMUST00000110022,ENSMUST00000103171 2 3 3 124 2 144143626 144156647 AAATCAAGTTTACCACCGG 57 144143520 144143538 CCTCTTTACCTGGTTGTGG 59 NA DesignRelaxed Mus musculus 50 Ovol2 ENSMUSG00000037279 ENSMUST00000037423,ENSMUST00000110022,ENSMUST00000103171 2 3 3 124 2 144143626 144156647 AAATCAAGTTTACCACCGG 57 144143520 144143538 CCTCTTTACCTGGTTGTGG 59 NA DesignRelaxed Mus musculus 50 Rps16 ENSMUSG00000037563 ENSMUST00000082134,ENSMUST00000041274 3 2 2 86 7 29137285 29137392 AATTTATGCCATCCGACAG 57 29137525 29137543 TTGATCTCCTTCTTGGAGG 58 NA Nonspecific Mus musculus 50 Mpp6 ENSMUSG00000038388 ENSMUST00000036225 3 1 2 80 6 50113584 50113604 ATATTAGTGGAAGTGTCACCC 59 50113644 50126891 CCATATTGACGTAACTCTGCT 59 NA Mus musculus 50 P140 ENSMUSG00000038453 ENSMUST00000107596,ENSMUST00000107595,ENSMUST00000064145,ENSMUST00000107594,ENSMUST00000107593,ENSMUST00000107590 3 6 7 183 11 97413041 97413059 CACCTGAAGAGCAAGTACC 59 97403856 97410196 TCCAGTAGTTTGGTTGCTG 59 NA Mus musculus 50 Camk1d ENSMUSG00000039145 ENSMUST00000044009,ENSMUST00000114987 3 2 3 113 2 5283166 5366126 GTCATGCAACTTGTGTCTG 59 5283071 5283090 ATAGTATACGGCATCCAGGA 59 NA Mus musculus 50 Nt5dc1 ENSMUSG00000039480 ENSMUST00000105512,ENSMUST00000047885 3 2 3 82 10 34042460 34042479 TACAAACGCATTAAAGCCTG 59 34034657 34042417 CCTTCTCTTCATCATTCTCGA 59 NA Mus musculus 50 Ppp2r4 ENSMUSG00000039515 ENSMUST00000113603 1 1 3 85 2 30283911 30291090 AAAGTCTCTGAGGAAGCAG 58 30291139 30291157 AGGTAAACTGCCACTTCAG 59 NA Mus musculus 50 Nphp4 ENSMUSG00000039577 ENSMUST00000081393,ENSMUST00000056567 1 2 4 117 4 151880638 151881470 TCTTCCAAGAACAGCTCTG 59 151881551 151881569 TGTTGAACACGTACTCCAG 59 NA Mus musculus 50 AA536717 ENSMUSG00000039599 ENSMUST00000051915 1 1 5 187 14 21170629 21175585 GTTCTCACAGGAACTTGAC 57 21177259 21177280 CTTCACTCGGAGTAATTATCTG 58 NA Mus musculus 50 Dnajc11 ENSMUSG00000039768 ENSMUST00000103200,ENSMUST00000062904,ENSMUST00000105666 3 3 3 99 4 151324542 151324560 TGTATGCTTTACCATCCGG 59 151324622 151326959 CACTAAGCACTTCATAAGCC 58 NA Mus musculus 50 Zfp335 ENSMUSG00000039834 ENSMUST00000041361 2 1 2 80 2 164725657 164725675 TTTAAGAAGCGCTACACCT 58 164725516 164725614 GAACTCACACTTGAATCTGC 59 NA Mus musculus 50 Plcb2 ENSMUSG00000040061 ENSMUST00000102524 1 1 3 80 2 118537914 118537932 TCAAGTACTTCAATGCCCA 58 118537727 118537870 CAGAGAAGAGTTTCTCGGG 59 NA Mus musculus 50 Erg ENSMUSG00000040732 ENSMUST00000113846 3 1 4 82 16 95590983 95598923 ATTACAACTAGGCCAGCTG 59 95590297 95590939 TGGTAAGGATCTAACTGAGGA 59 NA Mus musculus 50 Camsap1l1 ENSMUSG00000041570 ENSMUST00000048309 1 1 2 105 1 138194345 138194363 AAATCTAAAGAGCACCACC 57 138189989 138190596 TGTAACGAGCTATAAGAGCT 57 NA Mus musculus 50 Znrf3 ENSMUSG00000041961 ENSMUST00000109867,ENSMUST00000049538 2 2 2 81 11 5186259 5187389 AACGTCGTAGTCAGAATTCC 59 5186197 5186217 CTCTTGGAGTTGAACTTTCTG 58 NA Mus musculus 50 A530082C11Rik ENSMUSG00000042202 ENSMUST00000116253,ENSMUST00000105608,ENSMUST00000105606,ENSMUST00000043829 2 4 4 107 4 154990356 154991735 TTCTTCATGGATATCCCTGTG 59 154991803 154991822 ACTCTGAAGGTGAAACAAGG 59 NA Mus musculus 50 Il17re ENSMUSG00000043088 ENSMUST00000058548,ENSMUST00000062146,ENSMUST00000101065,ENSMUST00000053569 1 4 5 82 6 113418938 113419028 CTTGTGTCCTGATGTCTCC 59 113419074 113419092 GAACTACACCCACTAGAGC 59 NA Mus musculus 50 Wdfy3 ENSMUSG00000043940 ENSMUST00000053177,ENSMUST00000043529 2 2 2 80 5 102292840 102292860 GATCTTACAATGACCTCATGC 58 102290485 102292798 TAGTGAGGTCAACTTCCTC 57 NA Mus musculus 50 Fmn1 ENSMUSG00000044042 ENSMUST00000099576,ENSMUST00000081349 3 2 6 86 2 113436538 113443334 TACTATGATCAGGAAGCTGGA 59 113443382 113443400 AAACTTGACTTGAGAGGCC 59 NA Mus musculus 50 Scml4 ENSMUSG00000044770 ENSMUST00000063063,ENSMUST00000105494 3 2 2 107 10 42675833 42677435 GAAAGCACGAGATTGATGG 58 42677503 42677524 CAATGTGATAGCAGAGTTTCAG 59 NA Mus musculus 50 Dpy19l4 ENSMUSG00000045205 ENSMUST00000084892,ENSMUST00000065018 1 2 3 92 4 11217598 11217618 CTACAGTTTGAGAATCCAGCT 59 11217425 11217544 TTTCCCATTCAGCTGAAGG 59 NA Mus musculus 50 Sh2d5 ENSMUSG00000045349 ENSMUST00000105824,ENSMUST00000062126,ENSMUST00000105823,ENSMUST00000116271 1 4 5 186 4 137810659 137810678 GTCTCAAGATCTACAGTGGG 59 137811606 137812638 AGGATATGGACCTCTCCAG 59 NA Mus musculus 50 2410002F23Rik ENSMUSG00000045411 ENSMUST00000055858,ENSMUST00000107948,ENSMUST00000084937 2 3 6 99 7 51503650 51504915 TCATCATCTTACTGTGGTGG 59 51505398 51505416 TGGTTGTCTGAAGGAACTG 59 NA InUTR Mus musculus 50 Mtus1 ENSMUSG00000045636 ENSMUST00000046161 1 1 5 81 8 42087708 42087726 AGTGTGAGAAGCTTCAGAG 58 42085064 42087663 TTGATTTCTGGAAGCTGCT 59 NA Mus musculus 50 Cldn12 ENSMUSG00000046798 ENSMUST00000115446,ENSMUST00000060947,ENSMUST00000115445 3 3 3 153 5 5511079 5511097 TGGAGAAACGCTGATTACC 59 5508328 5508346 CAGTTAGGAAGCAGAGTCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Gchfr ENSMUSG00000046814 ENSMUST00000057454 3 1 1 140 2 118993586 118993604 CTCATCAGCACTCAGATCC 59 118997680 118997699 GTCGTTGACGTAGTATTCGT 59 NA DesignNoJunction Mus musculus 50 Nqo2 ENSMUSG00000046949 ENSMUST00000110268,ENSMUST00000021843,ENSMUST00000058978 2 3 3 80 13 34064333 34071406 AATGATATCACTGGTGCCC 59 34071450 34071468 AGCTTTCTTCTTGTAGGCT 58 NA Mus musculus 50 Ccdc108 ENSMUSG00000047021 ENSMUST00000094844 2 1 2 80 1 74957064 74957082 ACTTCACCTCTACCATCCA 59 74954355 74957021 TGTACAGCTCGTAAATCTGG 59 NA Mus musculus 50 Olfr685 ENSMUSG00000047794 ENSMUST00000051355 1 1 1 60 7 112329228 112329246 GAAACCACAGTGAATCGAG 58 112329186 112329204 CATCTAGTCCTACCACCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Odz4 ENSMUSG00000048078 ENSMUST00000107166,ENSMUST00000107169 3 2 6 123 7 103702246 103843286 ACACAGAAACCGATCATCC 59 103843372 103843391 CTGTTCAAGGAGTTGATGGA 59 NA Mus musculus 50 Rnf149 ENSMUSG00000048234 ENSMUST00000062525 3 1 1 80 1 39620937 39620958 CATAGGAAGGAGACTAAGAAGG 59 39617606 39620898 ATCGACATCAATTCCCTTCTC 59 NA Nonspecific Mus musculus 50 Sacs ENSMUSG00000048279 ENSMUST00000074447,ENSMUST00000100499 1 2 3 127 14 61811409 61811427 CACCTCAGAAGAATTCCCA 58 61812313 61821549 GAGTACATGGTCTTCCTCG 59 NA Mus musculus 50 1110034B05Rik ENSMUSG00000048495 ENSMUST00000079998,ENSMUST00000097732 3 2 2 81 1 57447535 57447553 CCCACTCTTTCCTAAAGCA 59 57445583 57447490 ATGGAACCATAAAGCAGGA 58 NA Mus musculus 50 BC038286 ENSMUSG00000049339 ENSMUST00000097694,ENSMUST00000060113 3 2 2 80 1 75141000 75141200 AGAATCCAGCTCAGTTCTG 58 75141244 75141262 TAACTCCCGGAACATAGTG 58 NA Mus musculus 50 Vgll2 ENSMUSG00000049641 ENSMUST00000058347 1 1 1 60 10 51745034 51745052 GTCCTCTTCACCTACTTCC 58 51745076 51745094 CCCTACTGAAATGTTCGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Slc35c1 ENSMUSG00000049922 ENSMUST00000051836,ENSMUST00000067631 2 2 2 60 2 92294806 92294825 CTATACCAAGAAGGTGCTCC 59 92294765 92294783 GTTATAGAAGGTTAGGCGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Nlgn2 ENSMUSG00000051790 ENSMUST00000108634,ENSMUST00000056484,ENSMUST00000094069 1 3 3 69 11 69641400 69641527 CTCAGAAGGACTGTTCCAG 59 69641349 69641367 GTAGTTGACAGACCAGCTG 59 NA DesignRelaxed Mus musculus 50 Trpm3 ENSMUSG00000052387 ENSMUST00000074770,ENSMUST00000099564 2 2 7 109 19 22972208 22972226 GTGATCGAGTACCTGATGG 59 22972298 22975552 CTCAAGGGAATATCATCCCT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Glis3 ENSMUSG00000052942 ENSMUST00000065113 1 1 2 110 19 28373431 28391756 GAACTCTATTCAGCTCCCA 58 28373339 28373357 ATTATGTCCTGGAGAAGGG 58 NA Mus musculus 50 Vps24 ENSMUSG00000053119 ENSMUST00000065364,ENSMUST00000059462 2 2 2 118 6 71502438 71510896 GACAGGCAAATAAGAGATATCC 58 71510975 71510993 GACCTGATCATCTCCTTGG 59 NA DesignRelaxed Mus musculus 50 Ebf4 ENSMUSG00000053552 ENSMUST00000110288,ENSMUST00000110287,ENSMUST00000110286,ENSMUST00000066048,ENSMUST00000110283 2 5 5 89 2 130132587 130132742 GGTGTATAATAATGGACTTCGG 58 130134289 130134308 TGTCCCTCATAGATGATAGC 58 NA Mus musculus 50 Tanc2 ENSMUSG00000053580 ENSMUST00000100330,ENSMUST00000089485,ENSMUST00000066094 1 3 3 80 11 105641369 105641387 CAAGGACTGTAGCTATGGG 59 105641430 105659884 GTTAATGTTGCAATGATGCC 58 NA Mus musculus 50 Tprkb ENSMUSG00000054226 ENSMUST00000113753,ENSMUST00000113752,ENSMUST00000067137,ENSMUST00000089570 1 4 4 153 6 85874509 85877245 CCAATGTGATTGTCGATCC 58 85877806 85877824 AATTTCTTCAAGGCCTCTG 57 NA Mus musculus 50 2300002D11Rik ENSMUSG00000056596 ENSMUST00000070802 1 1 1 60 4 133047116 133047134 GAAGGAGGCACATTTACTC 57 133047074 133047093 TACAGCCACTTTAGAGAAGC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Skap1 ENSMUSG00000057058 ENSMUST00000107663 2 1 7 86 11 96402730 96402748 CAATCTGAGTGGGACTCAC 59 96402798 96539263 AGTAACCAAGGATGACCCT 59 NA Mus musculus 50 BC051142 ENSMUSG00000057246 ENSMUST00000097347 1 1 7 88 17 34558799 34558817 TATTTCCCATGGGAGACAC 58 34571483 34574124 TTGTTCTACCAGGATTGGA 57 NA Mus musculus 50 Arhgap24 ENSMUSG00000057315 ENSMUST00000094559,ENSMUST00000112855,ENSMUST00000112854,ENSMUST00000073302,ENSMUST00000112853,ENSMUST00000112852,ENSMUST00000070000,ENSMUST00000112849 3 8 8 81 5 103304838 103307469 GAAGAAGCAGGTGTTAAGG 58 103307513 103307532 TGCAAATGTACTTCAGAAGG 58 NA Mus musculus 50 Gstm1 ENSMUSG00000058135 ENSMUST00000106671 1 1 2 65 3 107818033 107819260 TACAACCCTGACTTTGTGG 59 107817986 107818004 CACCTTTAGACTCAGGCTC 59 NA DesignRelaxed Mus musculus 50 Tspan7 ENSMUSG00000058254 ENSMUST00000115526,ENSMUST00000076354 2 2 2 83 X 10156618 10159297 ATGCTGAAACTGTATGCCA 59 10159343 10159362 ATGACGAAACACAAATCCAG 58 NA Mus musculus 50 Rpl18 ENSMUSG00000059070 ENSMUST00000075178,ENSMUST00000072503 1 2 2 82 7 52974939 52974957 ATCAGGTTGTGCTGAAGAG 59 52975002 52975304 CTTCATCTTTCGGATCATGC 59 NA Nonspecific Mus musculus 50 Hist4h4 ENSMUSG00000060093 ENSMUST00000102964 2 1 2 63 13 23852675 23852693 CTAACCAAAGGCCCTTCTC 59 23852630 23852648 GTGGTTCAGTATTACAGCG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Plekhh1 ENSMUSG00000060716 ENSMUST00000039928,ENSMUST00000021546 3 2 2 81 12 80180021 80180039 TAGATCCATTCCAGACCAG 57 80180084 80180433 TTCTGTAATCTTGGGAGCA 58 NA Mus musculus 50 Myl4 ENSMUSG00000061086 ENSMUST00000018800,ENSMUST00000106957 3 2 3 102 11 104438878 104441726 AGAGTGTGAAGATAGACTTCAG 58 104445336 104445355 CCGTAGGTGATCTTCATCTC 59 NA Mus musculus 50 1810073N04Rik ENSMUSG00000061306 ENSMUST00000103018,ENSMUST00000045402,ENSMUST00000076697,ENSMUST00000053692 2 4 4 83 11 119990567 119990585 ACTCCGGTTTAAAGTCCTC 58 119989831 119990520 AGGATGGTTTCCACATTGG 59 NA Mus musculus 50 Csn1s2b ENSMUSG00000061388 ENSMUST00000072539,ENSMUST00000113279 2 2 3 99 5 88242975 88242993 CAGAATATGGATGTGGCCT 59 88245680 88247977 TGTCAGATACCTTCATGGGA 59 NA Mus musculus 50 Acvr2b ENSMUSG00000061393 ENSMUST00000035093,ENSMUST00000111699 3 2 2 76 9 119337644 119337662 GCTCATGAACGACTTTGTG 59 119338998 119339016 AGATTTCCCGTTCACTCTG 59 NA DesignNoJunction Mus musculus 50 Tnnt3 ENSMUSG00000061723 ENSMUST00000105955,ENSMUST00000105952,ENSMUST00000105957,ENSMUST00000074187,ENSMUST00000105947,ENSMUST00000105946,ENSMUST00000105945,ENSMUST00000105941 1 8 20 166 7 149689963 149690165 AGAGGAAGAAGTCCAGGAG 59 149697210 149697228 CAAAGTGGCTGTCAATGAG 59 NA Mus musculus 50 Sphk1 ENSMUSG00000061878 ENSMUST00000106388,ENSMUST00000106387,ENSMUST00000100201,ENSMUST00000106386,ENSMUST00000063396,ENSMUST00000063446,ENSMUST00000100200 2 7 8 110 11 116396299 116396397 TAAACTGATACTCACCGAACG 59 116396469 116396487 TCATGCATCAGACCATCAC 59 NA Mus musculus 50 Cnih4 ENSMUSG00000062169 ENSMUST00000111059,ENSMUST00000075968 1 2 2 85 1 183083927 183086000 TAAACAAGTGGGTGATCCC 59 183086049 183086067 AAGGAAGATGAACCAGTGC 59 NA Mus musculus 50 Arf2 ENSMUSG00000062421 ENSMUST00000057921,ENSMUST00000063347 1 2 3 82 11 103834364 103843012 CCAGAACACTCAAGGTCTG 59 103843058 103843076 TTCTGGTCAATTCTTCCCG 59 NA Mus musculus 50 Gm382 ENSMUSG00000062791 ENSMUST00000096332 2 1 1 215 X 123591627 123591646 CCATCAAGAAGAAACTGGAC 58 123594795 123594813 TACGAACCACATCATTTGG 57 NA DesignNoJunction, InUTR Mus musculus 50 Bbs5 ENSMUSG00000063145 ENSMUST00000112286 1 1 3 92 2 69495040 69501091 TCTGCAAATTAGTGGAGGA 58 69501146 69501165 TTGTGAAGTGAGTTGATCTC 57 NA Mus musculus 50 Serpina11 ENSMUSG00000063232 ENSMUST00000109971,ENSMUST00000074693 2 2 2 101 12 105223011 105224078 CTTCTTCAAAGCCAAGTGC 59 105222928 105222946 ATCATGGGAATTCGGAGTG 59 NA Mus musculus 50 Cntn4 ENSMUSG00000064293 ENSMUST00000089208,ENSMUST00000113264,ENSMUST00000113261,ENSMUST00000113260,ENSMUST00000113258,ENSMUST00000079416 1 6 6 80 6 106473564 106473583 AATGTAAAGCAAATGGGAGG 58 106473623 106475364 GTATTCTATCCCGTGTTAACAG 58 NA Mus musculus 50 2610305D13Rik ENSMUSG00000066000 ENSMUST00000105720,ENSMUST00000037565 2 2 2 61 4 146989504 146992533 CTGCACAGTGTCTATTAACC 58 146989462 146989480 TTCCCATTCCTCTGATGAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Clec16a ENSMUSG00000068663 ENSMUST00000115827,ENSMUST00000038145 1 2 6 80 16 10596061 10596079 ACGCTGAGAAGACTAAAGG 59 10596121 10611110 TCACCATCTCAATCTCTTCAC 59 NA Nonspecific Mus musculus 50 Nlrp1a ENSMUSG00000069830 ENSMUST00000108519,ENSMUST00000048514 2 2 3 84 11 70922536 70922554 GTCCCTACGATGAACATGG 59 70921554 70922488 CTACCATACCTGACTGCTG 59 NA Mus musculus 50 Tmem132b ENSMUSG00000070498 ENSMUST00000031446 2 1 1 153 5 126118570 126118588 TGTGAAGATAACGGCTGTG 59 126178940 126178958 AATCTCATAGAAGGAGCCG 58 NA DesignNoJunction Mus musculus 50 1700086L19Rik ENSMUSG00000071265 ENSMUST00000095617 1 1 1 60 12 75396387 75396408 GAAGATCTACATCAAGATTCCC 58 75396542 75396561 TGTCTTCCGGTAATATCAGG 58 NA DesignNoJunction Mus musculus 50 ENSMUSG00000073394 ENSMUSG00000073394 ENSMUST00000097320 3 1 1 68 17 44874300 44874320 ACTGAGGCGATCATTATACTG 59 44874350 44874368 TCAGAATTTGAGGCTGGTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zfp628 ENSMUSG00000074406 ENSMUST00000116354 2 1 2 147 7 4869086 4869106 CTTAAAGGAAAGACTCAGCAG 58 4870474 4870492 CCACACTCATACTGAGCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Olfr1160 ENSMUSG00000075141 ENSMUST00000074397,ENSMUST00000099839 2 2 2 66 2 87846521 87846539 ACATTGCAATCTGTAACCC 57 87846473 87846491 GCCAACTGAATACAGACTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001020457.1 ENSMUSG00000075259 ENSMUST00000105513 2 1 2 60 10 31670951 31670970 CCAATACATAGAAGTGGCTC 57 31670910 31670928 GTTGTCAACACTTACTGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fnbp1 ENSMUSG00000075415 ENSMUST00000113564,ENSMUST00000113562,ENSMUST00000113561,ENSMUST00000073879,ENSMUST00000113560,ENSMUST00000100208,ENSMUST00000075326,ENSMUST00000100207,ENSMUST00000113555 2 9 12 73 2 30892101 30892119 GACTGTATGATGGCCAGAC 59 30891759 30892064 GTAACTACCATCTGGGCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Gpx4 ENSMUSG00000075706 ENSMUST00000105372,ENSMUST00000097227 2 2 2 60 10 79517815 79517835 CTGTGGAAATGGATGAAAGTC 59 79517857 79518678 ATTTGATGGCATTTCCCAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 0610010B08Rik ENSMUSG00000078886 ENSMUST00000109009,ENSMUST00000109008,ENSMUST00000099024,ENSMUST00000109007 1 4 4 80 2 175975162 175975181 ATCCTTCTCAGAAGAGTCTC 57 175975221 175975447 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 0610010B08Rik ENSMUSG00000078886 ENSMUST00000109009 2 1 4 70 2 175976792 175978488 CTTTAGAACATGCAGTGGC 59 175978519 175978540 GCCAATATTCATAGGGTTTCTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Marveld3 ENSMUSG00000001672 ENSMUST00000001722 2 1 2 84 8 112483662 112483681 AATATTACCAGTCGGAAGCG 59 112472547 112483615 ATTATCTGCACCACACCTC 59 NA Mus musculus 50 Folr1 ENSMUSG00000001827 ENSMUST00000106983,ENSMUST00000001882,ENSMUST00000106985,ENSMUST00000106982,ENSMUST00000106986 2 5 6 82 7 109008065 109012453 AATTTACACGACCAGTGCA 59 109008001 109008021 GAAATGTCCTTATGTGCTTCC 59 NA Mus musculus 50 1500002O20Rik ENSMUSG00000002210 ENSMUST00000002280 3 1 1 190 7 25202012 25205037 CTCAGTCTGTACAGGTTCC 59 25205646 25205664 ATCATCAGGTGCATCTGAC 59 NA Mus musculus 50 Cyp2c29 ENSMUSG00000003053 ENSMUST00000003137 1 1 1 87 19 39384251 39384269 AACACAAGGAATCACTGGA 58 39384319 39396057 TGTTCAATGTGGTTTACCTG 58 NA Mus musculus 50 Ppp5c ENSMUSG00000003099 ENSMUST00000003183 3 1 1 80 7 17595276 17595294 TCACCTTCATGAAAGACCT 58 17594398 17595232 GTACTAGGATCTGGTAGGC 57 NA Mus musculus 50 Rab3b ENSMUSG00000003411 ENSMUST00000106651,ENSMUST00000106650 1 2 3 82 4 108563132 108596520 CAGATATGGGACACAGCTG 59 108596566 108596584 ATGAGAATGAAGCCCATGG 59 NA Mus musculus 50 Dnase2a ENSMUSG00000003812 ENSMUST00000003910 1 1 1 81 8 87433798 87433818 CAGTGTAATACTCACTTCCCA 59 87433861 87434595 GGAGTACAGGTCATCTCCA 59 NA Nonspecific Mus musculus 50 Emid2 ENSMUSG00000004415 ENSMUST00000111103,ENSMUST00000057497 3 2 2 80 5 137219073 137220049 TATGATTGGAGTCCATGATCC 59 137219013 137219032 ATCTTGAGATTGGCTCTCAG 59 NA Mus musculus 50 Cd244 ENSMUSG00000004709 ENSMUST00000004829 3 1 1 91 1 173507468 173507953 GAAGCAGTTACAGTTCAGC 58 173508007 173508026 TAGAGCATCCTTGTTGATCC 59 NA Mus musculus 50 Grap ENSMUSG00000004837 ENSMUST00000004959 2 1 1 87 11 61477801 61483349 CTCTGTGAATTATGGTGACCA 59 61483398 61483416 GTTGAACTTCTCCTCCCAC 59 NA Mus musculus 50 Ufd1l ENSMUSG00000005262 ENSMUST00000005394,ENSMUST00000115578 3 2 2 81 16 18825904 18826358 AGTCAATAGAGGGAGAAGC 58 18827118 18827136 AGTCTATTCCCAGAACCAG 57 NA Mus musculus 50 Prl4a1 ENSMUSG00000005891 ENSMUST00000021779 3 1 1 123 13 28112153 28113249 AGATCCAACTGGAAGTACTG 58 28113335 28113353 TTGGAGAGGATAGGAGGAG 59 NA Mus musculus 50 Hyi ENSMUSG00000006395 ENSMUST00000106393,ENSMUST00000006562 1 2 2 88 4 118034528 118034546 CCCAGTATTTCCTGGACAC 59 118034684 118034804 GAATATGTCCATCTGCAACTG 59 NA Mus musculus 50 Itih3 ENSMUSG00000006522 ENSMUST00000006697 1 1 1 80 14 31732240 31732486 GAATGTGCAGATAGTCAATGG 59 31732180 31732200 AAGACTATGTTCTTAGGCACC 59 NA Nonspecific Mus musculus 50 Aprt ENSMUSG00000006589 ENSMUST00000006764 1 1 1 83 8 125099090 125099109 CTGGAAATCCAGAAAGATGC 58 125098917 125099044 AAACATGGTTCCTCCTGTG 59 NA Mus musculus 50 Pcdha1 ENSMUSG00000007440 ENSMUST00000070797 2 1 9 160 18 37092308 37315811 TTCAGATCTTTCTGGTAATCCC 59 37318983 37319001 TTGCACTGGATACTGTTGG 59 NA DesignNoJunction Mus musculus 50 Taz ENSMUSG00000009995 ENSMUST00000114182,ENSMUST00000069722,ENSMUST00000114180,ENSMUST00000077311 2 4 4 199 X 71528688 71528706 CTTATCACCGTCTCCAACC 59 71529354 71533373 TGGTAGACACCATCTCCTC 59 NA Mus musculus 50 Cars ENSMUSG00000010755 ENSMUST00000010899,ENSMUST00000105909 3 2 2 90 7 150773066 150773084 TCAAGATGGGAAGAAGGTG 58 150772401 150773012 GAAGGAGATGTAGGACCTG 58 NA Mus musculus 50 2310061C15Rik ENSMUSG00000014633 ENSMUST00000078589 3 1 1 86 8 119435034 119435053 ACCTGCTAAAGGAATGTCAC 59 119417999 119418017 AACACTTCCTCATTTCCCG 59 NA DesignNoJunction Mus musculus 50 Entpd2 ENSMUSG00000015085 ENSMUST00000114287 2 1 2 104 2 25253577 25253595 GAATGTCTTGAACAGGCAC 59 25253663 25254061 CCCAGCCATATTGAGTAGG 59 NA Mus musculus 50 Npdc1 ENSMUSG00000015094 ENSMUST00000114282,ENSMUST00000055921,ENSMUST00000071442 3 3 3 238 2 25263648 25263666 TTCTGCTTAGCAAGCTCAG 59 25264206 25264442 TTTGGAGGTTCCTTATGCC 59 NA DesignNoJunction Mus musculus 50 Sqstm1 ENSMUSG00000015837 ENSMUST00000015981,ENSMUST00000102774 1 2 2 82 11 50019577 50019595 ACCAGAAGATCCCAATGTC 58 50016525 50019531 CAACCTCAATGCCTAGAGG 59 NA Mus musculus 50 9630031F12Rik ENSMUSG00000015879 ENSMUST00000016023 3 1 1 81 5 45946424 45964458 GAATTCTCTACTTGAGGACCC 59 45946363 45946383 TTCTTCATCTGTCAGCTTCTC 59 NA Mus musculus 50 Fnta ENSMUSG00000015994 ENSMUST00000016138 3 1 1 80 8 27115027 27117667 GTCATTCAGGAATTCCGAC 58 27114965 27114985 AGAGTTATTCCTCACATCCTC 58 NA Mus musculus 50 Stac2 ENSMUSG00000017400 ENSMUST00000107555 1 1 2 136 11 97902504 97902625 GGACAGTGTATTCACAGCT 59 97902253 97902271 TCATAGACAGTGGAGACCC 59 NA Mus musculus 50 Suz12 ENSMUSG00000017548 ENSMUST00000017692 2 1 1 92 11 79839442 79842653 TATTCTTGTTTGCAGGCCA 59 79842709 79842727 CTGTATGTTCTCTGCTGCT 59 NA Mus musculus 50 Rhbdl3 ENSMUSG00000017692 ENSMUST00000017836 1 1 1 88 11 80151082 80160338 TTGTCATGAACTGGTCAGG 59 80166915 80166933 CCTTCCGAACTCCATACTC 59 NA Mus musculus 50 Mmp9 ENSMUSG00000017737 ENSMUST00000017881 1 1 1 99 2 164776751 164777926 AGTATCTGTATGGTCGTGG 58 164777989 164778007 ATAGTGGGACACATAGTGG 58 NA Mus musculus 50 Med13l ENSMUSG00000018076 ENSMUST00000100816 1 1 1 81 5 119171934 119174001 GCAGGTGGTTATAGGAGAG 58 119174046 119174064 CATAGTTGACATCCCTCCA 58 NA Mus musculus 50 Ksr1 ENSMUSG00000018334 ENSMUST00000018478,ENSMUST00000103237,ENSMUST00000092866,ENSMUST00000108264 2 4 5 85 11 78846777 78846796 CTCATCTAATCCCTCCAGTG 58 78842577 78846729 CTGAAATGTCTGGGAAGCT 59 NA Mus musculus 50 Rcn3 ENSMUSG00000019539 ENSMUST00000019683 1 1 1 139 7 52339129 52340285 AAGAGTATATCGCGGACCT 59 52339008 52339026 CCAGTAACCGACTTCACTG 59 NA Mus musculus 50 Mypn ENSMUSG00000020067 ENSMUST00000095580 2 1 1 83 10 62632168 62655143 CCAAGTAAGGTGGTATTGTG 58 62632104 62632122 AGTGAGTGAAGGTTTCCTG 59 NA Mus musculus 50 Avpr1a ENSMUSG00000020123 ENSMUST00000020323 2 1 1 60 10 121886750 121886769 TGACCTTTGTGATTGTAAGC 58 121886791 121886810 ATCTGGACGATGAAGAAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Jsrp1 ENSMUSG00000020216 ENSMUST00000020435 3 1 1 255 10 80275145 80276209 GGTCTCTATGACTACCAGAG 58 80274719 80274739 GGCTATATGAGACCCTAACTC 58 NA DesignNoJunction, InUTR Mus musculus 50 OTTMUSG00000001265 ENSMUSG00000020486 ENSMUST00000060360 2 1 9 83 11 87381711 87381729 GTACCATTGACAGAAGTGC 58 87381776 87382420 AACATCCAGGAAGAAAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Laptm4a ENSMUSG00000020585 ENSMUST00000020909 3 1 1 84 12 8938546 8941511 GAATGGCTGATAATGCCTG 58 8941558 8941577 GAAATGGCTCCATAAACCAG 58 NA Mus musculus 50 Itsn2 ENSMUSG00000020640 ENSMUST00000062580,ENSMUST00000020972 3 2 2 85 12 4644560 4644580 CTTATCTATCTGGTCCCTGAG 58 4644627 4646473 CTGATCCCTGAATCAGGTG 59 NA Mus musculus 50 Ftsj3 ENSMUSG00000020706 ENSMUST00000021048 1 1 1 80 11 106114264 106114282 TCCAGCTACAACTGAAGAC 58 106114049 106114222 TTCAGAAGAGACCTAAGTTCC 58 NA Mus musculus 50 Coro6 ENSMUSG00000020836 ENSMUST00000079770 2 1 6 181 11 77279935 77279953 TCATCATCTGGAATGTGGG 59 77280098 77281782 CTCTTCGAAATTGTTCGCA 58 NA Mus musculus 50 Myh3 ENSMUSG00000020908 ENSMUST00000108689,ENSMUST00000007301 3 2 2 80 11 66914686 66914850 ACATATCAGAGTGAGGAGGA 59 66914893 66914911 GGACTTGACTTTCACTTGG 58 NA Mus musculus 50 Six6os1 ENSMUSG00000021098 ENSMUST00000110489,ENSMUST00000044000 2 2 2 80 12 74014252 74016351 CTGTAGTAACTGGAAGCCA 58 74014190 74014208 TCTTGGTAAGCAGTAAGCT 58 NA Mus musculus 50 Lrrc16 ENSMUSG00000021338 ENSMUST00000072889,ENSMUST00000110402,ENSMUST00000110398,ENSMUST00000060540,ENSMUST00000021771,ENSMUST00000110400 1 6 7 80 13 24173845 24173863 AGGAAATACCTTCAGGAGC 58 24167595 24173801 TATCCGGTCAATCATCTGC 59 NA Mus musculus 50 Ctsq ENSMUSG00000021439 ENSMUST00000021888 1 1 1 87 13 61140508 61140802 AAATTATACAGTCCGGAGGA 57 61140440 61140458 AATTCTCCCTGTTATGCAG 57 NA Mus musculus 50 Habp4 ENSMUSG00000021476 ENSMUST00000021929 2 1 1 80 13 64283571 64285885 CAGATACAGAGACGATATGGT 58 64285927 64285945 GATGTGATGTCATTGGCAG 58 NA Mus musculus 50 Lbxcor1 ENSMUSG00000022245 ENSMUST00000055281 1 1 1 80 9 62987908 62987926 AGGATCAAATGAAGAGGGA 57 62987356 62987865 CGTTACACAAGGTATCTCTG 57 NA Mus musculus 50 Rad21 ENSMUSG00000022314 ENSMUST00000022927 3 1 1 80 15 51804830 51805393 AAATGACTTTGGTGACTTCG 58 51804769 51804788 ACTAACATGTCGTCATCCTC 59 NA Mus musculus 50 Lsg1 ENSMUSG00000022538 ENSMUST00000023190,ENSMUST00000089772 3 2 2 80 16 30565587 30567806 GCTTATGGATGCATGAGAG 58 30565525 30565543 GTCCTTTAGGATGTACCGT 58 NA Mus musculus 50 Cd96 ENSMUSG00000022657 ENSMUST00000023336 3 1 1 80 16 46109273 46117813 TCATTGTGGAACCCTATACAC 59 46109213 46109232 AGCATGGTATTTCCAGAGTC 59 NA Mus musculus 50 Nde1 ENSMUSG00000022678 ENSMUST00000023359,ENSMUST00000115794 3 2 3 123 16 14190211 14190231 ACTTCATGTATGATCAGTCCC 59 14190316 14191819 TTTCCTGACCCTTTATCGC 59 NA Mus musculus 50 Xdh ENSMUSG00000024066 ENSMUST00000024866 2 1 2 103 17 74284194 74285220 CCTTCCAAGGAAACCTCTG 59 74275924 74275942 GTTGTTTCCACTTCCTCCA 59 NA Mus musculus 50 2900010M23Rik ENSMUSG00000024208 ENSMUST00000025045 1 1 1 107 17 27262834 27262855 CTGCATTCAAACTACTACAAGC 59 27259775 27262099 TTCCAAAGTGTCTGTGGAC 59 NA Mus musculus 50 Anks1 ENSMUSG00000024219 ENSMUST00000097358,ENSMUST00000114842,ENSMUST00000025058,ENSMUST00000088027 3 4 4 81 17 28188523 28188541 CACTCTTTCCTGTCCAGTG 59 28188585 28188679 CTTTCAGGACATTGACAAGC 59 NA Mus musculus 50 Tnf ENSMUSG00000024401 ENSMUST00000025263 2 1 1 107 17 35338625 35338643 TCTGTCTACTGAACTTCGG 58 35337842 35338039 AAGATGATCTGAGTGTGAGG 58 NA Mus musculus 50 Lox ENSMUSG00000024529 ENSMUST00000025409 2 1 1 87 18 52686614 52686632 AAGAGTGAAGAACCAAGGG 59 52684884 52686563 GTGGTAATGTTGGTGACAG 58 NA Mus musculus 50 Spire1 ENSMUSG00000024533 ENSMUST00000045105,ENSMUST00000082243,ENSMUST00000115050,ENSMUST00000091867 1 4 4 90 18 67705332 67705350 TTATCAGGCAGTATGTCGG 58 67690130 67705279 CTTAAGGTTCTCCTTTGCAC 58 NA Mus musculus 50 Ppic ENSMUSG00000024538 ENSMUST00000025419 1 1 1 87 18 53568835 53568853 TTCTTCATCACCTTGACCA 58 53566707 53568784 AATGTACCACAGTCATCCC 58 NA Mus musculus 50 Pde6a ENSMUSG00000024575 ENSMUST00000025468 3 1 1 80 18 61391092 61391110 GTAGCCATAATCATGGCTG 58 61391152 61392503 GAGGTACTTGAGAAGAATCTC 57 NA Mus musculus 50 Apba1 ENSMUSG00000024897 ENSMUST00000025830 3 1 1 80 19 24018611 24019385 GAATGGAATTATCTGCAGCC 59 24019427 24019446 ATTTCGATGATCCGATGTCC 59 NA Mus musculus 50 Trim8 ENSMUSG00000025034 ENSMUST00000026008 1 1 1 114 19 46588959 46589115 AAATCCTAATGGACAGGACC 59 46589192 46589210 AACTGCTTCTCCTTCTTGG 59 NA Mus musculus 50 Jarid1c ENSMUSG00000025332 ENSMUST00000112584,ENSMUST00000112588,ENSMUST00000082177 3 3 3 82 X 148683023 148683041 ATACTCTGCAGAGCTTTGG 59 148683087 148683219 TTCTGTGGGTACCATATGC 59 NA Mus musculus 50 Cdk2 ENSMUSG00000025358 ENSMUST00000026416,ENSMUST00000026415 2 2 2 81 10 128136257 128136536 TTGTTATCGCAAATGCTGC 59 128136194 128136212 CATCCTGGAAGAAAGGGTG 59 NA Mus musculus 50 Xrcc6bp1 ENSMUSG00000025436 ENSMUST00000026504 2 1 1 124 10 126331293 126331312 TCACCAACATCAGACATCTG 59 126305773 126328708 AGTCTCTATCTGATGATGTTGC 59 NA Mus musculus 50 Phf17 ENSMUSG00000025764 ENSMUST00000026865 1 1 1 85 3 41405329 41405347 AAGTGTCTCACATTCCCAG 59 41405396 41408400 CACAGAGCACTGTATGGAG 59 NA Mus musculus 50 Pdia4 ENSMUSG00000025823 ENSMUST00000077290 2 1 1 80 6 47756633 47757012 CCAGGAAGAAATTGTTGCC 59 47756571 47756592 GTCAATGAAAGAGTGACTTCAG 59 NA Mus musculus 50 Nhej1 ENSMUSG00000026162 ENSMUST00000027347 1 1 1 112 1 75014845 75015383 CACATAAAGACTCTGGAGAG 57 75014752 75014770 ATATTCAGGCTCTGAGAGG 57 NA Mus musculus 50 Htr2b ENSMUSG00000026228 ENSMUST00000027431 3 1 1 102 1 87999193 88007123 TGACAATCATGTTTGAGGCT 59 87999110 87999128 CAGAGATGCATGATGGAGG 59 NA Mus musculus 50 Tnnt2 ENSMUSG00000026414 ENSMUST00000112087,ENSMUST00000112086,ENSMUST00000112085,ENSMUST00000027671 3 4 4 87 1 137744341 137744568 GACTTTGATGACATCCACAG 58 137744618 137744636 TCTTCCTGTTCTCGAAGTG 58 NA Mus musculus 50 Efcab2 ENSMUSG00000026495 ENSMUST00000027775 2 1 1 85 1 180406009 180411448 CATGACTGAGGAAGGTGAG 59 180411496 180411515 TAATGGTGTTTGATTCGGGA 59 NA Mus musculus 50 Iqwd1 ENSMUSG00000026571 ENSMUST00000027856 3 1 1 81 1 167263513 167266884 GCTGATGAAGTTATAACTCGGA 59 167263453 167263471 TCAACATGAAAGAGGCTGG 59 NA Mus musculus 50 4930426L09Rik ENSMUSG00000026736 ENSMUST00000028069 3 1 1 60 2 18920388 18920408 AATGTCATTCCCAACCTACTC 59 18920430 18920448 GCTGTCTTGACTAAAGCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pfkfb3 ENSMUSG00000026773 ENSMUST00000091464,ENSMUST00000114846,ENSMUST00000114845,ENSMUST00000028114,ENSMUST00000114844,ENSMUST00000100411,ENSMUST00000049849 1 7 7 83 2 11405607 11405625 AGATACCTACCCTGAGGAG 58 11404188 11405560 AGATCCTGGTAGGACTCTC 59 NA Mus musculus 50 9130404D14Rik ENSMUSG00000026796 ENSMUST00000028135,ENSMUST00000113210,ENSMUST00000113209 1 3 3 85 2 32778185 32778384 CGTGCTGAAGAAATACGAC 58 32778433 32778451 GGAAGGGAATGGTGATCTG 59 NA Mus musculus 50 St6galnac6 ENSMUSG00000026811 ENSMUST00000113290,ENSMUST00000113282,ENSMUST00000095044,ENSMUST00000072111,ENSMUST00000081879 2 5 6 66 2 32464824 32467749 GAGTAGCAACAAAGAGCAG 58 32467779 32467797 GATGAGGATGGTGATGAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Traf1 ENSMUSG00000026875 ENSMUST00000028234,ENSMUST00000113064 3 2 2 80 2 34811765 34811783 TCTGTCCTAAATGCAGAGC 59 34804612 34811722 CATCAGAGTGAACCTTCTCC 59 NA Mus musculus 50 E2f1 ENSMUSG00000027490 ENSMUST00000000894,ENSMUST00000103145,ENSMUST00000109704 2 3 3 80 2 154390204 154390222 AGACTGACCATCAGTACCT 59 154389839 154390161 GAGATTTCACACCTTTCCCT 59 NA Mus musculus 50 Ptgfrn ENSMUSG00000027864 ENSMUST00000102694 1 1 1 98 3 100860568 100864567 CTCAGAAGATTCTGTGCTC 57 100860488 100860506 TTCTTGGAAGACACTTTGC 58 NA Mus musculus 50 Lelp1 ENSMUSG00000027927 ENSMUST00000029535 2 1 1 62 3 91939639 91939660 GTCAAGTGATAAGTCTAGTGAC 57 91939598 91939616 TGTTCACATCTGGGATCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1110007M04Rik ENSMUSG00000028261 ENSMUST00000108209,ENSMUST00000029925 2 2 2 162 4 24825445 24825734 GAGTCAGTATCCAGAAATCG 57 24828876 24828894 ATTTCCTATCGGCAGTCTG 59 NA DesignNoJunction Mus musculus 50 Chmp5 ENSMUSG00000028419 ENSMUST00000030128 2 1 1 99 4 40905941 40905960 GAGGATATGATGGAAGATGC 57 40906022 40907900 CATCTAACTCTGCTTCCAG 57 NA Mus musculus 50 Dph2 ENSMUSG00000028540 ENSMUST00000030265 2 1 1 80 4 117562408 117562427 AGATGACACTAGATGTTCGG 58 117562269 117562365 CTAAGGAATGAAGCTGCAG 58 NA Mus musculus 50 1700041C02Rik ENSMUSG00000028637 ENSMUST00000063642 2 1 4 82 4 119012466 119022342 GTGAAGAGTATGTCAAGAGCA 59 119012404 119012422 TTCTTGCCATAGAGCTTCC 59 NA Mus musculus 50 Tal1 ENSMUSG00000028717 ENSMUST00000030489 2 1 1 109 4 114737359 114740891 ATTTCTGATGGTCCTCACAC 59 114740963 114740981 ATCAGCTTTCTGAGCTCAG 59 NA Mus musculus 50 Gnat3 ENSMUSG00000028777 ENSMUST00000030561 3 1 1 82 5 17521456 17521476 AAGAAAGATCTCTTCCAGGAG 58 17521520 17525311 TCAAATGTGTTTGGTCCAG 58 NA Mus musculus 50 BC008163 ENSMUSG00000028878 ENSMUST00000030696,ENSMUST00000097856,ENSMUST00000036010 3 3 3 80 4 132469737 132472048 GATGATCGAAAGAAGGTGGA 59 132469676 132469695 TTTGGTCTTCTGAAGGACAC 59 NA Nonspecific Mus musculus 50 Stx12 ENSMUSG00000028879 ENSMUST00000030698 2 1 1 80 4 132413293 132414347 AGGTGATCTGATCGATAGC 58 132413231 132413249 CTTTGTAGCTGATCAGTGG 57 NA Mus musculus 50 Casz1 ENSMUSG00000028977 ENSMUST00000060495,ENSMUST00000094464 2 2 2 60 4 148315830 148317023 TATGAATAAGATGTCTCAGGGC 59 148317044 148317062 TTCTGTCTTGATGCTCAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 1700001C02Rik ENSMUSG00000029182 ENSMUST00000031078 1 1 2 80 5 30783021 30784459 TTTACAAGACAGTCCAGCA 58 30784500 30784521 GAAGTACAAAGTAAGGAACACG 59 NA Mus musculus 50 Polr2b ENSMUSG00000029250 ENSMUST00000031167 1 1 1 80 5 77742177 77742198 CATGCAATATGATGAAGACGAC 59 77742236 77744883 AAGTAAGAACTGATCACGATCC 59 NA Mus musculus 50 Agk ENSMUSG00000029916 ENSMUST00000031977 1 1 1 81 6 40307111 40314285 GTTGTCAAGACGGATTATGAG 58 40314328 40314346 CTCCAGCAACAATGATCAC 58 NA Mus musculus 50 Klrc1 ENSMUSG00000030167 ENSMUST00000032270 2 1 2 85 6 129628317 129628335 ATTACTACAGTTGCCACAC 57 129627328 129627791 GTGTAGTTTATATCTCTGTGGG 57 NA Mus musculus 50 Rab38 ENSMUSG00000030559 ENSMUST00000032778,ENSMUST00000107256 1 2 2 67 7 95599255 95639119 TTGAAACATCAGCCAAGGA 59 95639150 95639168 AAGTATGTGCTTGACCAGG 59 NA DesignNoJunction Mus musculus 50 Mvp ENSMUSG00000030681 ENSMUST00000032919 3 1 1 83 7 134131045 134131064 AGTTCAAGGAGATGACAGAG 58 134130619 134130999 GAAGTTTCACCTGCATCTC 58 NA Mus musculus 50 Hsd17b14 ENSMUSG00000030825 ENSMUST00000107752,ENSMUST00000033097,ENSMUST00000107751 3 3 3 68 7 52821351 52821369 TTTGGCTTTGGATGAAAGC 59 52821498 52821516 GGAGTCCAGATGTTTCCTG 59 NA DesignNoJunction Mus musculus 50 Usp11 ENSMUSG00000031066 ENSMUST00000033383 1 1 1 80 X 20291995 20292013 CCAAGAAGGGCAATATCTC 57 20292055 20292166 CAGCTACTATCATCTTGTCTG 57 NA Mus musculus 50 Fgf16 ENSMUSG00000031230 ENSMUST00000033581 2 1 1 93 X 102967951 102969284 CTATGGATCGAAGAAACTCAC 58 102969339 102969357 GTGTTTGTACAAGGTGGAG 58 NA Mus musculus 50 Irak1 ENSMUSG00000031392 ENSMUST00000114352,ENSMUST00000068286,ENSMUST00000114360,ENSMUST00000114714,ENSMUST00000114347,ENSMUST00000114344,ENSMUST00000114339,ENSMUST00000114334,ENSMUST00000033769,ENSMUST00000114354,ENSMUST00000114353,ENSMUST00000073369,ENSMUST00000101458 3 13 13 95 X 71266350 71266368 ACGACTGGACATTCTTCTG 59 71265866 71266294 ACGTTAGAACTCTTGATGTCTC 59 NA Mus musculus 50 Galnt7 ENSMUSG00000031608 ENSMUST00000034021,ENSMUST00000110316 2 2 2 80 8 60062616 60062635 GTTTGGATTTAACATGGTGG 57 60031399 60062573 TACTTGCATTCTTCTTGGC 58 NA Mus musculus 50 9130017C17Rik ENSMUSG00000031662 ENSMUST00000034087 2 1 1 62 8 91153848 91153866 CTCTTTGAGATCGCCTCAG 59 91151718 91153823 TTGGTACATCACAAACTTGG 58 NA DesignRelaxed Mus musculus 50 Pin1 ENSMUSG00000032171 ENSMUST00000034689 2 1 1 91 9 20466775 20466793 ACTTTGAATCTCTGGCCTC 59 20466848 20467632 TTTCTGCATCTGACCTCTG 59 NA Mus musculus 50 Aqp9 ENSMUSG00000032204 ENSMUST00000074465,ENSMUST00000113570,ENSMUST00000113569 3 3 3 96 9 70980499 70980517 ATGGAGTGGTTCAAGTTCC 59 70978338 70980441 TGAGTCCGTCATAGTAAATGC 59 NA Nonspecific Mus musculus 50 Plscr1 ENSMUSG00000032369 ENSMUST00000034930,ENSMUST00000113048 3 2 2 80 9 92161382 92161400 GAGAAGTCATGACTCTGGA 57 92161443 92161562 CCTGGATTTCTATCTCCTGG 58 NA Nonspecific Mus musculus 50 Ankrd15 ENSMUSG00000032702 ENSMUST00000049400,ENSMUST00000078392 3 2 2 99 19 25505559 25507362 TGGAAGACAATGATGGCAG 59 25507425 25507443 GCTTTCGAGAAGTTGAGGT 59 NA Mus musculus 50 1700031F05Rik ENSMUSG00000032894 ENSMUST00000048061 3 1 1 80 X 100059531 100059549 TCTGAACCTTCAAATGACC 57 100056533 100059488 ATCATATTAGGGAACAGGCA 58 NA Mus musculus 50 Ift57 ENSMUSG00000032965 ENSMUST00000046777 2 1 1 95 16 49736821 49736839 GAATCTACGACAGATGCTG 57 49736897 49758516 CCTCCAATCCTTATTGTCAG 57 NA Mus musculus 50 ENSMUSG00000033219 ENSMUSG00000033219 ENSMUST00000035980 2 1 1 81 5 14911513 14912162 CACATTTCTATCGTAACCTGC 59 14911452 14911470 TCCTGCTGTAATGTCATCG 59 NA Mus musculus 50 MGI:1919786 ENSMUSG00000033450 ENSMUST00000036370 1 1 1 81 17 8119783 8119801 GATAAGCAGTCTCGATGGT 58 8119934 8120240 GATATCACCCTCTGACTGAC 58 NA Nonspecific Mus musculus 50 Spr ENSMUSG00000033735 ENSMUST00000045986 3 1 1 200 6 85086936 85086957 TGGTTAACATCTCATCTCTGTG 59 85084223 85084241 TTAACTCTGGGTCCTTGGA 59 NA DesignNoJunction Mus musculus 50 Cpsf1 ENSMUSG00000034022 ENSMUST00000071898 2 1 1 80 15 76426488 76426506 GCTACCTATACCTCAGCAC 58 76426350 76426446 AGTCATCCAGGATAATGTCAG 58 NA Mus musculus 50 Gpbp1l1 ENSMUSG00000034042 ENSMUST00000030460,ENSMUST00000054876,ENSMUST00000106475 1 3 3 95 4 116260037 116260055 AGTCTGCTTTCACCAATCC 59 116260114 116261199 TAGTACTGGAGGGACTCTC 58 NA DesignRelaxed Mus musculus 50 Chchd4 ENSMUSG00000034203 ENSMUST00000040835 2 1 1 68 6 91417679 91417697 ATGATCCCTATGAGGAGCA 59 91415260 91415279 CAAGACATGGACAATTCCAG 58 NA DesignNoJunction Mus musculus 50 Golgb1 ENSMUSG00000034243 ENSMUST00000114812,ENSMUST00000039855 1 2 2 80 16 36917022 36917040 GCTCTAAAGGATCAGCTCC 59 36917084 36918010 CTTGTCATGTTCAAGCCTG 59 NA Mus musculus 50 Gcsh ENSMUSG00000034424 ENSMUST00000040484 2 1 1 60 8 119506619 119507718 TTACGAAGATGGTTGGCTG 59 119506577 119506597 CAATTCATCCATCTCTGAAGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Kdelc2 ENSMUSG00000034487 ENSMUST00000037853 2 1 1 84 9 53206054 53206073 GAAAGAAGGGCAGTTAACTG 58 53206119 53207800 GGCATATTTCTGCAGTACTC 58 NA Mus musculus 50 Mon2 ENSMUSG00000034602 ENSMUST00000073792,ENSMUST00000037557 3 2 2 80 10 122459934 122459954 CTTTGACGTCACTCATTAGAG 58 122457520 122459892 AAAGCAGCTGTAGTCTCTG 59 NA Mus musculus 50 Tmem5 ENSMUSG00000034620 ENSMUST00000038772 2 1 2 81 10 121527564 121527583 TTCATAACATATGACAGCCC 57 121526092 121527521 GAAACTGCCTATATGTTGCT 57 NA Mus musculus 50 Dnaic2 ENSMUSG00000034706 ENSMUST00000069325,ENSMUST00000092469 3 2 2 90 11 114611800 114611819 ACTTTCTGACTGTTGGAGAC 59 114611872 114613114 TAAGCCATGTGGTACTTGG 59 NA Mus musculus 50 Cd207 ENSMUSG00000034783 ENSMUST00000037882 2 1 1 100 6 83625638 83625658 AAGAGATCTGGATAAAGCCAG 59 83624383 83625579 GAATGTCACTCTGTTGTTTGAG 59 NA Mus musculus 50 Xkr6 ENSMUSG00000035067 ENSMUST00000037659 2 1 1 63 14 64417196 64417214 AGCTCTGCATAATGATCCA 58 64437663 64437681 GAAGTCACAGAGGAGACAC 59 NA DesignNoJunction Mus musculus 50 Sgcg ENSMUSG00000035296 ENSMUST00000077954 2 1 1 89 14 61859240 61859258 TTACAGCAGATGGACTTCG 59 61855723 61859187 GAGATGAGTCCACTCTGGA 59 NA Mus musculus 50 Ssx9 ENSMUSG00000035371 ENSMUST00000089384,ENSMUST00000103001 1 2 2 105 X 8326149 8326168 CTACTCTGATGAAGAGTGGG 58 8326236 8326553 GTTCATGGTGACACCTAGG 59 NA Mus musculus 50 9030025P20Rik ENSMUSG00000036552 ENSMUST00000040594,ENSMUST00000097393,ENSMUST00000081476 2 3 5 60 17 15180064 15180084 GAAATTCAGTATTCGCCTTGG 59 15180103 15181302 GTATCTCAAGAAACAACTCTGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Upf3b ENSMUSG00000036572 ENSMUST00000076265,ENSMUST00000115219 2 2 3 94 X 34642120 34644431 CGAGGATGATCCAGAATACAG 59 34642046 34642065 CAATTTCCTCCAGCAATGTC 59 NA Mus musculus 50 Rbm42 ENSMUSG00000036733 ENSMUST00000042726,ENSMUST00000108143 2 2 2 65 7 31426363 31426381 TTTGTCAGCTTCAAAGACC 58 31426229 31426336 CACATACTTCCCATTCATCTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Lrg1 ENSMUSG00000037095 ENSMUST00000041357 2 1 1 62 17 56259494 56259512 GATCTGTGACAAGAACCTG 57 56259450 56259468 AACATCTTGTTTCGGTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Wee2 ENSMUSG00000037159 ENSMUST00000038907 2 1 1 80 6 40413224 40413242 CATCATATCCGCAAAGGGA 59 40413283 40414147 GATCATGTTCTTGAGTAGACCA 59 NA Mus musculus 50 Paqr7 ENSMUSG00000037348 ENSMUST00000081525 1 1 1 60 4 134062829 134062847 ACCTGTGTTTACAGTGGAC 59 134062871 134062889 ATAGATGTACGGCTTCCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Arid5a ENSMUSG00000037447 ENSMUST00000115032,ENSMUST00000115031,ENSMUST00000097779,ENSMUST00000097778,ENSMUST00000115030 3 5 8 73 1 36374468 36374486 GATCTACAAGGCAGTGGAG 59 36374944 36374962 CATACACGTTCTTCCAGAG 57 NA DesignNoJunction Mus musculus 50 D430028G21Rik ENSMUSG00000037523 ENSMUST00000041362,ENSMUST00000110199 2 2 2 81 2 131067776 131068864 CCCAGTAGAGAATTCAGAGC 59 131068908 131068926 AGAGGGTATCAAAGAGCCA 59 NA Mus musculus 50 Vstm2l ENSMUSG00000037843 ENSMUST00000047411 3 1 2 246 2 157762970 157769604 AAATAAGTGTGGTCAAGGTG 58 157770016 157770034 AGAATGATGAGGAACAGGA 57 NA DesignRelaxed Mus musculus 50 Hoxa13 ENSMUSG00000038203 ENSMUST00000047993,ENSMUST00000114416 1 2 2 187 6 52209954 52209972 TCCCATGGAAAGCTATCAG 58 52209070 52209088 ACTGCACCTTAGTGTAAGG 58 NA DesignNoJunction Mus musculus 50 BC057079 ENSMUSG00000038368 ENSMUST00000097992,ENSMUST00000084432,ENSMUST00000107148,ENSMUST00000107147 1 4 4 80 4 88049243 88049263 AGAACTGATGGGTTATGTGAG 59 88049305 88053027 AAGTCCAAAGCCTCTTCAG 59 NA Mus musculus 50 BC031781 ENSMUSG00000038806 ENSMUST00000038091 1 1 1 106 1 182790191 182791236 AGTCCTCAAAGGTATGCAG 58 182791306 182791324 TTGCACTAGTTTCCTGGTC 59 NA Mus musculus 50 Itpkb ENSMUSG00000038855 ENSMUST00000070181 2 1 1 121 1 182264256 182264275 CTCTTCTTACGATGACTCGG 59 182264359 182342820 TTCTCCATGACTTGCTCAC 59 NA Mus musculus 50 Zdhhc1 ENSMUSG00000039199 ENSMUST00000044286 2 1 1 82 8 107999970 107999988 CTCAGGAAGCAAAGGAGAC 59 107997449 107999926 CATGTAGAACTCCATCTCCTG 59 NA Mus musculus 50 Svs1 ENSMUSG00000039215 ENSMUST00000037696 3 1 1 108 6 48940969 48940987 ACCATTCTGAGATTGTCCC 58 48941057 48941586 GTTGGAGAGGCTGTATATCTC 59 NA Mus musculus 50 Srrm2 ENSMUSG00000039218 ENSMUST00000090276,ENSMUST00000088621,ENSMUST00000073292 1 3 3 80 17 23960860 23960989 GGATCTACAGAGCAGTGAG 58 23961033 23961051 GTCTCCTTCCTCTTGTGAC 59 NA Mus musculus 50 2300002M23Rik ENSMUSG00000039269 ENSMUST00000044326 3 1 1 60 17 35705384 35705405 GGTAGCAATGGTTTAGTATCAG 58 35705426 35705444 TTCTTACTGGGTAAGGACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 6430573F11Rik ENSMUSG00000039620 ENSMUST00000036363 2 1 1 84 8 37568705 37568724 GTGAAGTCATGGTATGTGAC 58 37568769 37574636 TGATGTATGACTCCTATGGAG 58 NA Mus musculus 50 Negr1 ENSMUSG00000040037 ENSMUST00000074015 1 1 2 170 3 156809290 156823561 AGAAGAGGCTCTTCAATGG 58 156823695 156975761 CTGTACTTGGAGGGTTGAG 59 NA Mus musculus 50 Orc3l ENSMUSG00000040044 ENSMUST00000108142,ENSMUST00000048706,ENSMUST00000108144 2 3 3 80 4 34542480 34544571 CATAACTATCAGCAGTCAGCA 59 34542420 34542441 TGGATAATAACAGGAGATGTGG 59 NA Mus musculus 50 Ppapdc2 ENSMUSG00000040105 ENSMUST00000045674 2 1 1 68 19 29039302 29039320 TTGTGGATTATTGCTGGCT 59 29039352 29039370 GTCACTGTTGATTCCACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Btnl9 ENSMUSG00000040283 ENSMUST00000046522,ENSMUST00000066531 2 2 2 85 11 48994380 48996475 GAACTCAGACAAGGTCTGG 59 48994313 48994331 ATAAGCGACATGGGAACTC 59 NA Mus musculus 50 Trim41 ENSMUSG00000040365 ENSMUST00000047145,ENSMUST00000047139 3 2 2 191 11 48622711 48622729 AAGGTTTCTGGCTGAAGAG 59 48621976 48622556 GTCTCCTTGATGTCTTGCA 59 NA Mus musculus 50 Gyltl1b ENSMUSG00000040434 ENSMUST00000068586,ENSMUST00000090582,ENSMUST00000043868,ENSMUST00000111284 1 4 4 80 2 92205832 92205850 TTATGATCCTCGCTTTGTG 57 92205639 92205789 AGGAATTCATATTCCTGAGC 57 NA Mus musculus 50 Limd2 ENSMUSG00000040699 ENSMUST00000045923,ENSMUST00000064545,ENSMUST00000106875 1 3 3 121 11 106020379 106020484 CGGTCTAAGTCCTTTAGCT 58 106020276 106020294 CAGAAACAAGAGTTGTGGA 57 NA Mus musculus 50 Snrpd2 ENSMUSG00000040824 ENSMUST00000049294 1 1 1 224 7 19735243 19736585 TGAGTCTCCTCAATAAACCC 58 19737850 19737868 CAGTCCACATCTCCTTCAC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Tmtc4 ENSMUSG00000041594 ENSMUST00000037726,ENSMUST00000088343,ENSMUST00000057683 1 3 3 80 14 123325287 123326782 ATAACACAGGTAACTTAGCCC 59 123325227 123325248 ACATAAGGGAGTGATCATTAGG 59 NA Mus musculus 50 BC006965 ENSMUSG00000041674 ENSMUST00000042883 3 1 2 65 11 112572407 112572426 GCTTCTTTGTCAAGTCTTGG 59 112552994 112553012 TTCCAACAGATCTCCAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pde3a ENSMUSG00000041741 ENSMUST00000111839 3 1 2 216 6 141198938 141198956 GACCAAGGAAGAGATTCCG 59 141447193 141447211 TTTGGCAGTAGATTCTCCT 57 NA DesignNoJunction Mus musculus 50 Cd1d2 ENSMUSG00000041750 ENSMUST00000041920 2 1 1 104 3 86791723 86791741 AGTCAGACCTAGAGAAGCA 59 86792263 86792285 TTGGGTAGAAAGAGACATGAC 59 NA Mus musculus 50 Pramel1 ENSMUSG00000041805 ENSMUST00000037419 2 1 1 138 4 142987505 142988274 GGATGAGCTATTCTGGTGG 59 142988374 142988394 GACCCATTTCAAATTCAGGTG 59 NA Mus musculus 50 Sytl3 ENSMUSG00000041831 ENSMUST00000097430,ENSMUST00000075075,ENSMUST00000115762,ENSMUST00000115761,ENSMUST00000115760,ENSMUST00000080509 1 6 7 80 17 6919847 6919866 GAGATATGCATCAAGACCTG 57 6919909 6932603 GTAGGTCTTGACATACGGA 58 NA Mus musculus 50 1700122O11Rik ENSMUSG00000042494 ENSMUST00000049083 3 1 1 270 17 48174516 48175179 CCAAGTGACTTTGGAGAGG 59 48174131 48174149 AGAAATCTTCCCACCACTG 59 NA DesignNoJunction Mus musculus 50 Selk ENSMUSG00000042682 ENSMUST00000112268 3 1 1 60 14 30786577 30786595 TAGGATCAGTCACCTTCGT 59 30786619 30787665 TTACCTTCCTCATCCACCA 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Id1 ENSMUSG00000042745 ENSMUST00000109824,ENSMUST00000038368 3 2 2 283 2 152562068 152562086 CTCAGGATCATGAAGGTCG 59 152562332 152562351 ATTACATGCTGCAGGATCTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Foxo4 ENSMUSG00000042903 ENSMUST00000062000,ENSMUST00000113703 1 2 3 91 X 98454558 98454857 TCAACTTTGAGCCAGATCC 59 98454912 98454930 AAAGTGGATAAGGACAGGC 59 NA InUTR Mus musculus 50 Pigv ENSMUSG00000043257 ENSMUST00000062118 3 1 2 148 4 133221682 133225658 CTACAGGCACTCTTCAACC 59 133221552 133221571 ATAAACAGGAAGTGTTCAGC 58 NA DesignNoJunction Mus musculus 50 Olfr975 ENSMUSG00000043331 ENSMUST00000054067 2 1 1 60 9 39758317 39758336 GTCACTGAATTCATCCTGGT 59 39758276 39758294 CAAAGAGCATCCTTTCCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr975 ENSMUSG00000043331 ENSMUST00000054067 3 1 1 60 9 39758317 39758335 TCACTGAATTCATCCTGGT 58 39758275 39758293 ACAAAGAGCATCCTTTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Usp48 ENSMUSG00000043411 ENSMUST00000105842,ENSMUST00000030549,ENSMUST00000105840,ENSMUST00000105841,ENSMUST00000097838,ENSMUST00000055131,ENSMUST00000105836 3 7 10 124 4 137200404 137206217 GAAGATTCAGATCATGCACG 59 137206304 137206322 TGACAGACTCAGGAATGAC 58 NA Mus musculus 50 Olfr13 ENSMUSG00000043605 ENSMUST00000059512 1 1 1 60 6 43124628 43124648 GGTCTCTTATGCATGTATCCT 59 43124670 43124688 CCTTTGACCCTCTTCTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2200001I15Rik ENSMUSG00000043681 ENSMUST00000052126 3 1 1 104 14 35165252 35166891 AGAGAAGGCCATTAATGACG 59 35165167 35165185 GTAACAGCATCAGTGATGG 58 NA DesignRelaxed Mus musculus 50 1190005I06Rik ENSMUSG00000043687 ENSMUST00000061208 2 1 1 100 8 123135225 123152380 GTCTGAAAGGCTTTAAGATGTG 59 123135146 123135164 GATGATAATGTTGGGCACG 58 NA InUTR Mus musculus 50 Olfr62 ENSMUSG00000043698 ENSMUST00000102666 3 1 1 60 4 118338171 118338194 CCTTCTAGGATTCTCTAGTAACAC 59 118338211 118338231 GAGAAGAAAGATGCCAAACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr94 ENSMUSG00000043827 ENSMUST00000055324 1 1 1 60 17 37334771 37334789 ACTCACAGAAATTTCTGGC 57 37334729 37334747 TAATGCTAGACAGTGTTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pcdhb21 ENSMUSG00000044022 ENSMUST00000061405 1 1 1 60 18 37674204 37674223 TGTATGAGGTCCAAGTACCA 59 37674246 37674264 GCAGACACCTTGATTACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Als2cl ENSMUSG00000044037 ENSMUST00000084927,ENSMUST00000084926,ENSMUST00000111897,ENSMUST00000111896 1 4 4 80 9 110800272 110800290 GGGCTGCAAATACAAACTG 59 110800334 110800564 AGATGCTGAATTCGAGCTC 59 NA Mus musculus 50 Nkrf ENSMUSG00000044149 ENSMUST00000057093 3 1 1 103 X 34431694 34431714 GGCTGAAGGTATTGATATTGG 58 34430499 34431629 GATTCTGACCATCGTAGGT 58 NA Mus musculus 50 Rin3 ENSMUSG00000044456 ENSMUST00000056950,ENSMUST00000101114,ENSMUST00000110023,ENSMUST00000110024 2 4 4 80 12 103589155 103596925 GTGTCAGTAGAGACTTACTGC 59 103596966 103596985 TCTCAAGTTCAAGGAAGCTG 59 NA Mus musculus 50 NP_001074505.1 ENSMUSG00000044609 ENSMUST00000054104 2 1 1 61 7 50209403 50209422 CATATTACACTGGAGGAGGC 59 50209361 50209381 GTACCCACAAAGATCTTTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Spata21 ENSMUSG00000045004 ENSMUST00000051907 3 1 1 81 4 140663065 140663084 GTCACGTGGATTTCAAAGAC 59 140663127 140663257 ATCAGGACATTCTGTTCCAC 59 NA Mus musculus 50 Kcna5 ENSMUSG00000045534 ENSMUST00000060972 3 1 1 62 6 126483481 126483502 GAGTACTGACAGTATCAGAAGG 59 126483440 126483458 CTCTTGGCCTTTAGGTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc39a3 ENSMUSG00000046822 ENSMUST00000059551 1 1 1 112 10 80496375 80496393 ATGCTTTAATGCACTGCTG 59 80494370 80494388 AGAAACCCACCATCATGAG 59 NA DesignNoJunction Mus musculus 50 Tmem164 ENSMUSG00000047045 ENSMUST00000054263 3 1 9 193 X 139240591 139240609 TCTACCTGCTTTGGAAAGG 59 139276176 139276961 ACTCCATTCCTTAACATTCCTC 59 NA Mus musculus 50 9330128J19Rik ENSMUSG00000047117 ENSMUST00000055607 1 1 1 80 13 97194779 97199754 AAATCACTGACAAGCAAGG 58 97194717 97194735 TGATCAGCATATCCACGAC 59 NA Mus musculus 50 Rab2 ENSMUSG00000047187 ENSMUST00000060232 2 1 1 102 4 8488363 8499685 CACAATTGGTGTAGAGTTTGG 59 8505108 8505128 GATAGAACGAAAGGACTCCTG 59 NA Mus musculus 50 C230078M08Rik ENSMUSG00000047439 ENSMUST00000059100 1 1 1 61 17 26582122 26582140 CATGAGGTTGAAGACTGGG 59 26582165 26582183 ATGATCTCTTGCCTGAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr722 ENSMUSG00000048933 ENSMUST00000053290 2 1 1 60 14 50515178 50515197 TTATAAAGCCTGCATCACTC 57 50515137 50515155 AAACATTTCTCCTGCTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 C920005C14Rik ENSMUSG00000049687 ENSMUST00000050349,ENSMUST00000070098 1 2 2 60 15 82173860 82173881 ATCTGCTATTCTCTTTCGAGAC 59 82173901 82173920 TCCAATACCACAAGACTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700112C13Rik ENSMUSG00000049719 ENSMUST00000055340 2 1 1 96 9 110752300 110752511 CTTACAAAGATCCAAGAACCC 58 110752569 110752587 AATTCTAGTGACCAGGAGC 58 NA Mus musculus 50 9030420J04Rik ENSMUSG00000050730 ENSMUST00000034333 2 1 1 81 9 9148244 9155310 GTAGACTGGAGTGTGAGTG 59 9148181 9148199 AACTGGAATATGGTTCCGA 58 NA Mus musculus 50 Olfr164 ENSMUSG00000050742 ENSMUST00000056727 1 1 1 60 16 19286759 19286780 GGATTATTTGATCACAGTCCTC 58 19286720 19286741 AGAAGATACCCAGAATTAGGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pgbd5 ENSMUSG00000050751 ENSMUST00000116406,ENSMUST00000052580,ENSMUST00000095165 1 3 3 82 8 126898334 126900019 GAGAAGCAAGGGATCTACTG 59 126898271 126898289 TTGGTCAACATGGATGGAG 59 NA Mus musculus 50 Olfr1356 ENSMUSG00000051190 ENSMUST00000061289 2 1 1 60 10 78310201 78310219 GATCATGGATAGTCAGCGT 58 78310159 78310180 GATAGTCTTAACACAGTCAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 A630018P17Rik ENSMUSG00000051224 ENSMUST00000112188,ENSMUST00000112187 3 2 3 196 X 162943758 162945649 AAATAGCTGGACTTTCCAGG 59 162941281 162941299 GTTGCTCAATCAAGGAAGC 59 NA InUTR Mus musculus 50 Tbc1d22a ENSMUSG00000051864 ENSMUST00000109385,ENSMUST00000063414 1 2 2 83 15 86122564 86122582 AGGAATTACGGAAGCTGAG 59 86122629 86130089 CAGGAAGGTAACCTGAGAG 58 NA Mus musculus 50 Krt71 ENSMUSG00000051879 ENSMUST00000023710 3 1 1 88 15 101567032 101567050 TCATGAGCCTAAAGTTGGC 59 101565889 101566980 GTATTCTCCGGACATCCTG 59 NA Mus musculus 50 Rnf133 ENSMUSG00000051956 ENSMUST00000063548,ENSMUST00000115354 1 2 2 60 6 23599123 23599141 TTCAGATGGACATTGAGGA 57 23599081 23599100 GGCAATTCATTTGACATCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 B630019K06Rik ENSMUSG00000052364 ENSMUST00000064196 2 1 1 129 X 8470682 8470700 TGTTCCTTCATTGAAGCCA 59 8470793 8470811 CTCTAAGGAATTCGCAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mast1 ENSMUSG00000053693 ENSMUST00000109741,ENSMUST00000074363 1 2 2 80 8 87445286 87445305 AAACAGTTCTAGCCCTTGAG 59 87445118 87445245 AAGTAATGAGGAGGTTGTCTG 59 NA Mus musculus 50 Olfr1346 ENSMUSG00000054938 ENSMUST00000056144 3 1 1 60 7 6427391 6427409 TCAATTTGTCCTGTACCCA 58 6427431 6427451 ATGATGGCTGAGATAAAGTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gabra5 ENSMUSG00000055078 ENSMUST00000068456 3 1 1 92 7 64708377 64708395 TGACAATCTCTGCTGAGTG 59 64677245 64708321 TAGGGTAAGCATAACTGCC 58 NA Mus musculus 50 Zfp811 ENSMUSG00000055202 ENSMUST00000080905 1 1 1 61 17 32935803 32937336 CTAAGATGTCAACTTGTGGAG 58 32935762 32935780 ATCTCTGCACACTCATGAC 59 NA DesignNoJunction Mus musculus 50 Slain1 ENSMUSG00000055717 ENSMUST00000069443 3 1 1 80 14 104056223 104056242 GTCCTAGATAACCCAACTCC 58 104056285 104084899 CCTGGAGGTATAACCTTGC 59 NA Mus musculus 50 Nap1l3 ENSMUSG00000055733 ENSMUST00000079490 1 1 1 60 X 119510293 119510311 TTTCTTGGATAAGCTGCCC 59 119510251 119510271 CTGAATATTTCTGAGTGCCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cyct ENSMUSG00000056436 ENSMUST00000028430 3 1 1 63 2 76192281 76194144 GAACAAAGGTGTTATCTGGTC 58 76192238 76192257 ATATTTCTTCGGGTTCTCCA 58 NA DesignRelaxed Mus musculus 50 2310051M13Rik ENSMUSG00000056728 ENSMUST00000043754 1 1 1 94 13 60902318 60902336 CAAGAAGATGATCGACCTG 57 60902146 60902261 CTGTATTGGTCAAATCACCA 57 NA Mus musculus 50 Myh4 ENSMUSG00000057003 ENSMUST00000018632 3 1 1 93 11 67056950 67056970 CCATATGACTTTGCTTACGTC 59 67057024 67058111 TATCAACAGCAGTGTCTGTG 59 NA Mus musculus 50 V1rh15 ENSMUSG00000057209 ENSMUST00000072369 2 1 1 60 13 22271193 22271213 GTAAGGTCATTGTTTACCTGG 58 22271153 22271171 AGACTGCTAGTGCAAATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lypd3 ENSMUSG00000057454 ENSMUST00000080718 3 1 1 93 7 25423540 25423558 TCTTTCAGCTACAGCAGTG 59 25423615 25423948 TATGCACTCTCATTGCCTG 59 NA DesignRelaxed Mus musculus 50 Olfr787 ENSMUSG00000057617 ENSMUST00000077836 2 1 1 60 10 128899747 128899767 CTGTGATTACTGAGTTTGTGC 59 128899789 128899807 ATCACAACCTGGACTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2210010B09Rik ENSMUSG00000058192 ENSMUST00000115557,ENSMUST00000060063 3 2 2 90 9 20395856 20397613 AATACAAACAGGCAGAAGC 58 20397666 20397685 GGTCTTGAAATATGAGTGCT 57 NA Mus musculus 50 Eif4b ENSMUSG00000058655 ENSMUST00000078635 3 1 1 91 15 101921918 101923427 TGGCAGAAATACACGAAGG 59 101923482 101923500 GCTTAGAGGTTGGAGAGTG 59 NA Mus musculus 50 Pde1a ENSMUSG00000059173 ENSMUST00000090754 2 1 7 88 2 79767893 79767911 GATGTCAACGTTGTTGACC 59 79753955 79767843 CTTGAAGATCTTGTCTCATCG 58 NA Mus musculus 50 Slc14a1 ENSMUSG00000059336 ENSMUST00000091813,ENSMUST00000025433 2 2 2 80 18 78308138 78308158 AGTAAACTCTTCACACCTGTC 59 78306781 78308098 AAGAGACTTCAATAGCTCCAG 59 NA Mus musculus 50 Nrsn2 ENSMUSG00000059361 ENSMUST00000079278 3 1 1 130 2 152199850 152199868 GTATATCAACCGACCCTGG 59 152195566 152195587 CATTAACAAGCTCTAGTTTGGG 59 NA DesignNoJunction Mus musculus 50 ENSMUSG00000059659 ENSMUSG00000059659 ENSMUST00000082030 3 1 1 130 6 128389702 128422760 GTTATACAGCCTGGTCCTG 59 128422854 128422872 TCTAGACAAGACGGAACCA 59 NA InUTR Mus musculus 50 Olfr108 ENSMUSG00000059687 ENSMUST00000078207 2 1 1 60 17 37582579 37582600 ATCTTCCTAGGTCTTTACTTGC 59 37582618 37582639 CAATAGCTAACAGAAGTAGCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 V1rc18 ENSMUSG00000060390 ENSMUST00000073616 1 1 1 60 6 57906457 57906478 CCTAGCCAATATGTTTCTACTG 58 57906418 57906436 CTTAGGACTGTGACATGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ctnna3 ENSMUSG00000060843 ENSMUST00000105441,ENSMUST00000105440 3 2 3 80 10 62966812 62966832 AATATGGACACTCAGGATCTG 58 62966870 63000277 GGTAGTAACCTGGATTATCAGAG 59 NA Mus musculus 50 Kcnd2 ENSMUSG00000060882 ENSMUST00000081542 2 1 1 87 6 21673207 21673228 CTTCATAAGCAAATCTGGATCC 59 21673276 21675991 GACAAACTCATGGTTCGTG 59 NA Mus musculus 50 Rrs1 ENSMUSG00000061024 ENSMUST00000072079 1 1 1 80 1 9536064 9536082 AAAGAATGGCTGATCGAGG 59 9536126 9536144 TTCTTTCTTGGCCTGAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmprss11d ENSMUSG00000061259 ENSMUST00000031175 1 1 1 80 5 86756670 86760103 GATAACATCACTCACTGACC 57 86755577 86755596 GACAGTGTTATAAGGTCTGG 57 NA Mus musculus 50 Scfd2 ENSMUSG00000062110 ENSMUST00000072857,ENSMUST00000113542,ENSMUST00000075848 2 3 3 80 5 74858749 74878182 GAGTATGGGAAGAGTCACTC 58 74858688 74858708 TGATTTCTAAGAGCTCTGAGG 58 NA Mus musculus 50 Jazf1 ENSMUSG00000063568 ENSMUST00000074541 2 1 1 83 6 52720363 52727538 GAGATACAAGAATGTGAATGGC 59 52720301 52720319 CATTTGAATGGTTTGCGGA 59 NA Mus musculus 50 1700011J10Rik ENSMUSG00000063714 ENSMUST00000077161 1 1 1 60 2 72825679 72826436 ATTTGACCGAGAAGACCAC 59 72826460 72826478 TATCTGCAACTCACATCGT 58 NA DesignRelaxed Mus musculus 50 Izumo1 ENSMUSG00000064158 ENSMUST00000033100 3 1 1 96 7 52879584 52880043 AAAGGAAGTTCTTTGTCCCA 59 52880348 52880366 GGATTTCCGACAAATGTGC 59 NA Mus musculus 50 Cenpm ENSMUSG00000068101 ENSMUST00000089155,ENSMUST00000089157 3 2 2 63 15 82071786 82071804 CCGAATTGACCTGATTGTG 58 82070373 82071759 CTCCACTTTCTGGAGACTG 59 NA DesignRelaxed Mus musculus 50 Il2rb ENSMUSG00000068227 ENSMUST00000089398 2 1 1 85 15 78316212 78316230 CTCAACGAAACAATACCGG 58 78315457 78316164 GATCTCCTTCATGGGATCTG 59 NA Mus musculus 50 1700019G17Rik ENSMUSG00000068299 ENSMUST00000095757 3 1 1 97 6 85852247 85852266 GTAGATTCTCCCTGGATGTC 58 85852075 85852190 AACTGGTATGATTCAGACTCTC 59 NA InUTR Mus musculus 50 V1rc13 ENSMUSG00000068425 ENSMUST00000089829 3 1 1 70 6 66726382 66726402 CTGGGTGGACTTTATTATGTC 58 66726332 66726350 GAACAGTAAGCATGACTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1298 ENSMUSG00000068641 ENSMUST00000090322 3 1 1 61 2 111485336 111485354 TTGGACAAGTTTCTTGCTG 58 111485293 111485311 TAAATGGCTGGGTTTAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hist4h4 ENSMUSG00000069266 ENSMUST00000091702,ENSMUST00000102965 1 2 2 66 13 23849196 23849214 GGTTAAGGGACTAAAGCGA 58 23849244 23849262 AATTCAGTGAGTGGTCCTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Pcdhga2 ENSMUSG00000069394 ENSMUST00000003599 1 1 1 213 18 37831075 37831095 CCAAACTATGCAGATACTCTC 57 37992950 37992968 TATCAAACTGGTTGTTGGG 57 NA DesignNoJunction, InUTR Mus musculus 50 4930572O03Rik ENSMUSG00000069720 ENSMUST00000092696 1 1 1 80 5 15159398 15159416 TTTGGTGGAATTGAACCTG 58 15158593 15159357 GTTTCTGAGACCTGATATTCTG 58 NA Nonspecific Mus musculus 50 NM_177278.5 ENSMUSG00000069849 ENSMUST00000093007 3 1 1 119 17 69123655 69127150 AGAAGGAGCAGATAGATGG 57 69127232 69127251 TCCTGAACATCAGGATAGAG 57 NA Mus musculus 50 4733401H18Rik ENSMUSG00000070283 ENSMUST00000074208 1 1 1 135 9 108468577 108468679 TAGGATAGAGATTGTTGTGGTG 59 108468380 108468398 GAAGTTGAAAGTGGCACAG 59 NA Mus musculus 50 ENSMUSG00000070900 ENSMUSG00000070900 ENSMUST00000094969 1 1 1 68 4 94223514 94223532 TTACTACGCGTAGCTTCTG 59 94223564 94223582 AAACTCCAGACAACCTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ccin ENSMUSG00000070999 ENSMUST00000095107 3 1 1 60 4 43996526 43996544 ACAGAGGAAGCGTAAAGAG 59 43996568 43996586 GAAGAAGACATGATGGTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mug2 ENSMUSG00000071204 ENSMUST00000078431 3 1 1 82 6 122088502 122088521 AATTGGAAAGGAGAAACCTG 57 122088564 122089415 GAGTGTAGGGATAATGAAGGA 58 NA Mus musculus 50 ENSMUSG00000072564 ENSMUSG00000072564 ENSMUST00000100629 2 1 1 65 11 88833966 88833984 AAACACAAACAACCCTGTG 58 88833919 88833937 TGTTGACACTTCTCAGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 C87414 ENSMUSG00000072820 ENSMUST00000101020 2 1 1 62 5 95453268 95454097 ATGAATCAGGTCCTAGGGT 59 95454123 95454141 TAGGCATTGAGTGATGGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Lrrc61 ENSMUSG00000073096 ENSMUST00000114545,ENSMUST00000101436 1 2 2 60 6 48518710 48518728 GCCTCAAAGTCATAGATGG 57 48518752 48518770 CATAACTGGTACAGCTCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pramel4 ENSMUSG00000073723 ENSMUST00000097800 1 1 3 88 4 143697445 143697464 TATTATTGGGCCAAGCAGAG 59 143697514 143697578 AATTCCTGGATTGAGGAGTG 59 NA Nonspecific Mus musculus 50 ENSMUSG00000073868 ENSMUSG00000073868 ENSMUST00000098113 1 1 1 60 4 42729341 42729359 GTCTCTTTGGAAGACTGTG 57 42729383 42729401 TAGAACTTTGGGACTGGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Trim68 ENSMUSG00000073968 ENSMUST00000082175 3 1 1 80 7 109830262 109832572 GGGAATATAAGTGGAAACTCCA 59 109830203 109830221 CACTGACTTCCAGTTTCCA 59 NA Mus musculus 50 4930513N10Rik ENSMUSG00000074136 ENSMUST00000098472 1 1 1 123 8 98331383 98331401 GTTCCCATTTCACCATTCG 59 98331488 98331506 GATTGGTTTAAATCCGCGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 ENSMUSG00000074292 ENSMUSG00000074292 ENSMUST00000098705 3 1 1 85 8 69881359 69881377 TTCAAGAGGTATCGCACAG 59 69876737 69881310 TTGTATCTGTTGAGGCCTC 58 NA Mus musculus 50 Ehd2 ENSMUSG00000074364 ENSMUST00000098799 2 1 1 168 7 16548816 16549263 CTCAACAGGTTTATGTGCG 59 16543190 16543208 AGAGCAAGATGATGAGGTC 58 NA Mus musculus 50 Tdpoz5 ENSMUSG00000074427 ENSMUST00000098879 1 1 1 60 3 93764744 93764762 CCTGGACAGAACATAACAC 57 93764702 93764721 CTAGGTCATCTGTCAACAGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Fat3 ENSMUSG00000074505 ENSMUST00000082170,ENSMUST00000098977 1 2 2 100 9 15749355 15749373 GGACTTCAAGCTAGCTCTG 59 15742893 15749291 TGCCTTCCACAATCTTCAG 59 NA Mus musculus 50 F730031O20Rik ENSMUSG00000074570 ENSMUST00000109136 3 1 3 158 2 172253283 172253301 TGGACTTGAAGTGTGAGAG 58 172253423 172255157 GTAGGTTAGGTGACTGCTG 59 NA Mus musculus 50 1700101G07Rik ENSMUSG00000074571 ENSMUST00000077067 3 1 1 60 2 169408410 169408428 CAGACATCAACAGTCTCCT 58 169408451 169408470 AATGTAAATATGCAGGGTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Dcdc5 ENSMUSG00000074981 ENSMUST00000099638,ENSMUST00000037284 1 2 2 291 2 106224381 106225607 ATAAGACAGACAGAGGCAC 58 106241267 106241286 TCTCTATGTCATCCCATGAC 58 NA DesignNoJunction Mus musculus 50 Nrbf2 ENSMUSG00000075000 ENSMUST00000077839 3 1 1 82 10 66738323 66738343 GATTTCTTGTCACAGAAAGGC 59 66730899 66732856 CCAGTGATAAGTGAGCCTG 59 NA Nonspecific Mus musculus 50 Q6P6L0-2 ENSMUSG00000075007 ENSMUST00000099667 2 1 1 75 16 57507818 57513382 GAGAAACCAATGAATGAGTTGG 59 57513418 57513436 AGAGTTGTTCCAAGATCCG 59 NA DesignRelaxed Mus musculus 50 Olfr1271 ENSMUSG00000075062 ENSMUST00000111502,ENSMUST00000099751 2 2 2 60 2 90106331 90106349 CATCACTGACTTACTTGCT 57 90106289 90106307 TATCTGAGTTAGACAGCCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1249 ENSMUSG00000075079 ENSMUST00000099769 2 1 1 60 2 89470513 89470532 CTTTGGCTGTGACATATACC 58 89470472 89470491 GCCAAGGAAGTATGTATCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1166 ENSMUSG00000075135 ENSMUST00000099833 1 1 1 60 2 87964664 87964684 ATTGGTGGACTATGTACTGTG 59 87964624 87964643 ATTCACAATAGGAGAGTTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr228 ENSMUSG00000075180 ENSMUST00000099883 1 1 1 60 2 86323246 86323264 CTGGTCATTCTTGCTTCCT 59 86323204 86323222 CAGCAGAGTTCATCCTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075265 ENSMUSG00000075265 ENSMUST00000099984 1 1 1 60 16 32668055 32668075 GTCTGTGAAGACAGAGATAGC 59 32666761 32666779 TTTGCAGAGGATGAATGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 4933432I09Rik ENSMUSG00000075346 ENSMUST00000100100 1 1 1 159 16 18211275 18213933 GGTGACTCTAGTCTATCTGTG 58 18210960 18210978 CTTTATAGTGGGCAGGGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Olfr355 ENSMUSG00000075380 ENSMUST00000100147 3 1 1 60 2 36783021 36783042 GATTGTGATAGTGACAGAAGGA 59 36782982 36783001 GAAAGCAATGCATAGGAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075548 ENSMUSG00000075548 ENSMUST00000100447 3 1 1 139 14 68049981 68049999 CTATGGACACATGGCAGAG 59 68048583 68049881 GAAATTGATGTGTCTTCTCCTC 59 NA Mus musculus 50 IGKV12-44 ENSMUSG00000076566 ENSMUST00000103367 2 1 1 60 6 69764890 69764909 CATCCAGATGACTCAGTCTC 59 69764849 69764867 GATGGTGACAGTTTCTCCC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 IGHV1-20 ENSMUSG00000076697 ENSMUST00000103506 1 1 1 60 12 115962044 115962063 GTAGACAAATCCTCTAGCAC 57 115962003 115962021 CAGAGTCCTCAGATGTCAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRAJ32 ENSMUSG00000076897 ENSMUST00000103709 1 1 1 60 14 54805776 54805794 TGAATTATGGGAGCAGTGG 59 54805818 54805836 TTGACAGAAAGCAGAGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAC ENSMUSG00000076928 ENSMUST00000103740 2 1 1 123 14 54840419 54840438 TATCTTCAAAGAGACCAACG 57 54842688 54842706 GAGTCCCATAACTGACAGG 59 NA DesignNoJunction Mus musculus 50 Nrarp ENSMUSG00000078202 ENSMUST00000104999 1 1 1 60 2 25036750 25036768 CGAATTCAACGTGAACTCG 59 25036791 25036810 GATGACTGACTGGTGTAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000010671 ENSMUSG00000078496 ENSMUST00000063704 2 1 2 60 4 146889167 146889191 CACTAGAGAATACTTACAGAAGAGG 59 146889208 146890097 GAGTCACTTGTTATCCTTCG 57 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 Rex2 ENSMUSG00000078499 ENSMUST00000105731 1 1 3 97 4 145886500 145886518 ATGCTTTACCCAAACTTCC 57 145886579 145886601 CATTTGTCAGGCATTTGTC 57 NA Nonspecific Mus musculus 50 Zfp429 ENSMUSG00000078994 ENSMUST00000109732 3 1 1 129 13 67491991 67496988 TGTACCCAGGAATAACACC 58 67491880 67491898 GCCTTACCAAATTCTCCAC 58 NA Mus musculus 50 Flrt3 ENSMUSG00000079021 ENSMUST00000099301 1 1 1 80 2 140476921 140482678 AAAGCAACTTAGAAGGAGTG 57 140476860 140476879 CACGGAAGTTAATCCATGTC 58 NA InUTR Mus musculus 50 ENSMUSG00000068790 ENSMUSG00000079376 ENSMUST00000112760,ENSMUST00000112759,ENSMUST00000112758 2 3 3 62 14 5546395 5546413 TTGGTTCCATGCAGTACTC 59 5545676 5546369 CCTCCTTAATGCTGTAGGA 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Wdr52 ENSMUSG00000079576 ENSMUST00000085772 2 1 1 103 16 44479091 44479110 CCTTTCTGTTAACACAACCC 58 44479176 44479968 CTTGAGCGATCTTCTCCTC 59 NA Mus musculus 50 NP_001076016.1 ENSMUSG00000079597 ENSMUST00000114858 3 1 1 142 16 36184405 36186462 TGATAAGGTTAAGTCACTGC 57 36188015 36188033 TTATGTGGAGGAAACAACC 57 NA DesignNoJunction Mus musculus 50 Klra4 ENSMUSG00000079852 ENSMUST00000014477 1 1 1 156 6 130009565 130009583 TTCCAGCTTAACCCTTCTG 59 129994183 130002993 GTTCAAGGCAAGTTTAGATGG 59 NA Mus musculus 50 Pbsn ENSMUSG00000000003 ENSMUST00000000003 3 1 2 114 X 75093329 75093347 GATGCAACCAAGTCTACCT 59 75088334 75090363 ATGCTCCCTTCATACTGTG 59 NA Mus musculus 50 Gnb1l ENSMUSG00000000884 ENSMUST00000000904,ENSMUST00000100091,ENSMUST00000090086 3 3 5 113 16 18548187 18548205 TTCAGATTCTGGAGATGCC 59 18548282 18552475 GGAGACTGGAGTTAGTCTG 58 NA Mus musculus 50 Uhrf1 ENSMUSG00000001228 ENSMUST00000113038,ENSMUST00000001258,ENSMUST00000113035,ENSMUST00000113039 1 4 4 80 17 56451627 56451646 TGTTGAGATCTGTAGGAAGC 59 56451688 56452301 AGCTGAGAGTCATTCAAGAG 59 NA Mus musculus 50 Tcf25 ENSMUSG00000001472 ENSMUST00000108840,ENSMUST00000057934,ENSMUST00000093050 2 3 4 83 8 125905388 125905406 AAGGAAGGGCTAAACATGG 59 125905453 125906436 TTGCATTAGACTGTTCCGA 58 NA Mus musculus 50 Jup ENSMUSG00000001552 ENSMUST00000001592,ENSMUST00000107403 1 2 2 164 11 100239539 100239557 AAGATGACATCACAGAGCC 59 100238303 100239411 CAATAGTTGCCTTGACCAG 58 NA Mus musculus 50 Vwf ENSMUSG00000001930 ENSMUST00000100941,ENSMUST00000112262,ENSMUST00000112253 3 3 5 96 6 125541270 125541660 GCAACACTTGTATCTGCAG 59 125541720 125541738 CAGAGAACGGGAAGAAAGG 59 NA Mus musculus 50 Map2k7 ENSMUSG00000002948 ENSMUST00000062686,ENSMUST00000110999,ENSMUST00000110998,ENSMUST00000052385,ENSMUST00000003027,ENSMUST00000110995,ENSMUST00000110994,ENSMUST00000110996 3 8 8 80 8 4243846 4243958 TTGCTGTTAAGCAAATGCG 59 4244000 4244020 TCTTGAGTACTACATCCAGGT 59 NA Mus musculus 50 Cp ENSMUSG00000003617 ENSMUST00000091309,ENSMUST00000108327,ENSMUST00000108325 1 3 6 92 3 19889135 19889153 GAACCTGGTTACTCCACTG 59 19889206 19892517 ACTTAGTCTCTTGTTCTACTGG 58 NA Mus musculus 50 Mast2 ENSMUSG00000003810 ENSMUST00000106484,ENSMUST00000106486,ENSMUST00000046416 2 3 5 81 4 116003066 116006027 GAACAGACAGGACTGATGG 59 116003003 116003021 GTAGAGCTAGGAGTGTTGG 58 NA Mus musculus 50 Chn2 ENSMUSG00000004633 ENSMUST00000114402 3 1 4 178 6 54215194 54223083 GTAGGATCTCTTCACTGGT 57 54236165 54240271 TAACCCACAATCTGAACAC 57 NA Mus musculus 50 5730437N04Rik ENSMUSG00000004945 ENSMUST00000005053 2 1 2 80 17 5411429 5411448 AGATGCAATCCATATTCCCA 58 5411367 5411386 TGTCATTTCCACTCAGGAC 59 NA Mus musculus 50 Pex5 ENSMUSG00000005069 ENSMUST00000080557,ENSMUST00000112531 3 2 4 121 6 124353924 124354664 AATTGGCTAACTCTGAGGG 58 124353245 124353842 GACATCAGACTCTATAGCTGAC 59 NA Nonspecific Mus musculus 50 Cd44 ENSMUSG00000005087 ENSMUST00000111197,ENSMUST00000111194 1 2 15 80 2 102693215 102693233 TACTGAACAGCCTACTGGA 59 102682516 102693174 GTGCTGATTCTGTCTATATTGG 58 NA Mus musculus 50 Kbtbd4 ENSMUSG00000005505 ENSMUST00000111464,ENSMUST00000090682 2 2 2 115 2 90746425 90747706 ACTGATATCATCTCAGATGGG 58 90747783 90747801 CTAGTCCTTAGTGACTCGG 58 NA Mus musculus 50 Cugbp1 ENSMUSG00000005506 ENSMUST00000111448 1 1 6 91 2 90845011 90846799 TACTTAGCACTCCTACAGCA 59 90848329 90848347 AGCTGCATTGCATTTAACC 59 NA Mus musculus 50 Clint1 ENSMUSG00000006169 ENSMUST00000109261,ENSMUST00000109260,ENSMUST00000065062,ENSMUST00000109259 1 4 4 81 11 45697859 45697877 CCAGAACTCATGAACATGC 58 45697920 45699942 GCAGCAACGACTTATAAACTC 59 NA Mus musculus 50 Hap1 ENSMUSG00000006930 ENSMUST00000056033,ENSMUST00000103124 3 2 2 108 11 100213215 100213512 AGCGTTGTCAGTCTTATGG 59 100212835 100212853 TAATCCTGCATGTAGGAGC 58 NA Mus musculus 50 Tex11 ENSMUSG00000009670 ENSMUST00000113718,ENSMUST00000009814,ENSMUST00000113716 2 3 3 80 X 98111982 98128738 ATGCTTTCAGAGCTTTACAG 58 98111921 98111941 CAATTAGTCCACGATCTTCTG 58 NA Mus musculus 50 1700021C14Rik ENSMUSG00000010538 ENSMUST00000107556,ENSMUST00000010682 2 2 2 93 3 88099318 88099339 ACACTAGTAACCCTACTAAGGA 59 88091073 88091092 GGAAGATCAATGTAACTGGG 57 NA DesignNoJunction Mus musculus 50 Pkd2l2 ENSMUSG00000014503 ENSMUST00000097629 3 1 2 95 18 34576617 34576636 GAACAACTGGATTAGCAGAG 58 34576694 34577156 AAATTGCTCCTGATGATGC 58 NA Mus musculus 50 Hmgb3 ENSMUSG00000015217 ENSMUST00000072699,ENSMUST00000015361,ENSMUST00000088874,ENSMUST00000114582 2 4 4 97 X 68812439 68812853 TATGAGAAGGATGTTGCTGAC 59 68812912 68812930 TCTTCCTCTTCTTCCACCT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Rxrg ENSMUSG00000015843 ENSMUST00000015987,ENSMUST00000111386,ENSMUST00000111384 3 3 4 116 1 169543983 169544001 TGGCTCTCCGTATAGAGTC 59 169544080 169555075 CTGTTGACCACATTTAGCTG 59 NA Mus musculus 50 Ppfibp1 ENSMUSG00000016487 ENSMUST00000016631 3 1 2 81 6 146946733 146946751 TGAAGTAAAGAGGCTGCAG 59 146946794 146949473 TACTTCAATGTCTCGATCGAG 59 NA Mus musculus 50 Mtif3 ENSMUSG00000016510 ENSMUST00000066675,ENSMUST00000016654,ENSMUST00000110566,ENSMUST00000110564 3 4 4 81 5 147768408 147768427 AGAAATACCACGTTCAAGTC 57 147767375 147768365 TGGTTAAATATCTCCTCCGT 57 NA Mus musculus 50 Pscd1 ENSMUSG00000017132 ENSMUST00000017276,ENSMUST00000106305,ENSMUST00000106304,ENSMUST00000106302 2 4 5 88 11 118027404 118030344 GATCAAATGCATCAAGGCTG 59 118027335 118027353 GTCTCTTTGTGGAGGAGAC 59 NA Mus musculus 50 C1qtnf1 ENSMUSG00000017446 ENSMUST00000017590,ENSMUST00000106286,ENSMUST00000106284 1 3 3 133 11 118307932 118307950 GATCAACATCACCATCCTG 57 118309207 118309225 CTCCAATGGATCCCTTCTG 59 NA DesignNoJunction Mus musculus 50 Zkscan6 ENSMUSG00000018347 ENSMUST00000071465,ENSMUST00000018491,ENSMUST00000108692 2 3 3 83 11 65635449 65635470 GGATTCTACTCAGAAGGAACAG 59 65635514 65636342 TTGGAAATGCCTGCTACTC 59 NA Mus musculus 50 Vezf1 ENSMUSG00000018377 ENSMUST00000018521 3 1 1 60 11 87888208 87888226 AAAGACCCTTCAAATGCCA 59 87889715 87889733 GTCCGTAGTCTGTCTTTGG 59 NA DesignNoJunction Mus musculus 50 Derl2 ENSMUSG00000018442 ENSMUST00000108523,ENSMUST00000018586 2 2 2 76 11 70826629 70826649 CCTGGTGGAATAAGAATTCTG 58 70823890 70823909 TAATTGGGATCCTCATCTGG 58 NA DesignNoJunction Mus musculus 50 Ncor1 ENSMUSG00000018501 ENSMUST00000101066 2 1 8 140 11 62216955 62217309 CATCAAGACTGGAGTACCT 57 62211902 62211920 TCCATGAGCTGATCATAGC 58 NA Mus musculus 50 Pcgf2 ENSMUSG00000018537 ENSMUST00000103148,ENSMUST00000018681 1 2 3 80 11 97554091 97554110 TTGGAGACCAACAAATACTG 57 97553864 97554048 TTTGTCTGATCTGATGCTC 57 NA Mus musculus 50 Ndel1 ENSMUSG00000018736 ENSMUST00000018880,ENSMUST00000101017,ENSMUST00000108672 1 3 3 80 11 68657470 68658841 AGTATAAGCAAAGCTTCCAG 57 68657409 68657427 CCAACTCTGCTTCTAACTC 57 NA Mus musculus 50 Plod1 ENSMUSG00000019055 ENSMUST00000105713 2 1 4 83 4 147290447 147291426 GGGTGATAATAAGTTTCTGAGG 58 147290385 147290403 CAAACTGCACCTTCATGAG 59 NA Mus musculus 50 Zfp687 ENSMUSG00000019338 ENSMUST00000019482 1 1 2 80 3 94813051 94813069 GTCAGTGTCTTTAAGTGCC 58 94812831 94813007 GTGAGTGTTCTTGAGATGC 58 NA Mus musculus 50 Krt10 ENSMUSG00000019761 ENSMUST00000103131,ENSMUST00000006961 1 2 2 80 11 99248434 99248558 TGGTTCAATCAGAAGAGCA 58 99248372 99248391 GATTTCAGACTTATGGCTGG 58 NA Mus musculus 50 Ccdc53 ENSMUSG00000020056 ENSMUST00000020248 1 1 2 131 10 87682091 87697142 AAGATGGTTCAAGTGGGTG 59 87708534 87708552 TTCTTCTACGGCTCTTTCG 59 NA Mus musculus 50 Ccdc53 ENSMUSG00000020056 ENSMUST00000048238 3 1 2 80 10 87682092 87687781 AGATGGTTCAAGTGTTCCT 58 87687825 87687843 GATGTGTAACCGTAAAGGG 57 NA Mus musculus 50 4930415F15Rik ENSMUSG00000020191 ENSMUST00000020410,ENSMUST00000109678 2 2 2 80 11 11395444 11396408 ACATTCCTCTGTATACTGGTC 58 11396449 11396468 CCACAGACTTGATATCTCCG 59 NA Mus musculus 50 Acsl6 ENSMUSG00000020333 ENSMUST00000108902,ENSMUST00000108904,ENSMUST00000101211,ENSMUST00000101213,ENSMUST00000108899 2 5 12 185 11 54143453 54143473 GTTTCACAAGTGGTACAACAG 59 54150645 54151926 AGTAGACAACAGACTGCAC 59 NA Mus musculus 50 Hnrpab ENSMUSG00000020358 ENSMUST00000074669 3 1 3 88 11 51416145 51416164 TATCAGCAACAGCAGTATGG 59 51414962 51416097 TAATTTGTACTACCCTGACCTC 58 NA Mus musculus 50 Rasgef1c ENSMUSG00000020374 ENSMUST00000093142,ENSMUST00000109172,ENSMUST00000093141,ENSMUST00000063444 1 4 4 80 11 49789245 49791921 CGAAGACGGTTTGTATTTGG 59 49791962 49791982 CTTAGAGATTTCCACCTCTCC 59 NA Mus musculus 50 1700012B07Rik ENSMUSG00000020617 ENSMUST00000106674,ENSMUST00000020941 2 2 3 75 11 109658592 109658610 GATGAGTCCTCACAGAAGG 59 109655537 109655555 CTTCATGTCCATAAGGTGC 58 NA DesignNoJunction Mus musculus 50 Sh3yl1 ENSMUSG00000020669 ENSMUST00000110880 3 1 3 118 12 31607198 31611681 AAGATCATTCCTGAATGGTC 57 31624460 31624479 ACTGCTCTGTCATAATTCAG 57 NA Mus musculus 50 Tlk2 ENSMUSG00000020694 ENSMUST00000106939,ENSMUST00000106936,ENSMUST00000015107,ENSMUST00000106942 3 4 6 109 11 105071140 105082506 GATTACTTTGAGCGTCGAG 58 105082579 105082597 AACATCACTGACATGAGGG 59 NA Mus musculus 50 Ddx5 ENSMUSG00000020719 ENSMUST00000021062,ENSMUST00000106778 3 2 3 253 11 106646256 106646274 TATTGGTGCACTGGAACTG 59 106645415 106645433 CATTTAGAACCCAGTCACG 58 NA DesignNoJunction Mus musculus 50 3300001P08Rik ENSMUSG00000020863 ENSMUST00000107821,ENSMUST00000107820,ENSMUST00000021226,ENSMUST00000107822 1 4 4 83 11 94167531 94170948 TCTGATCTTGGTCCATGTG 58 94165267 94165285 GCCAACTTTCATAAAGCGA 58 NA Mus musculus 50 Cacna1g ENSMUSG00000020866 ENSMUST00000107790,ENSMUST00000107789,ENSMUST00000103166,ENSMUST00000107786,ENSMUST00000050636,ENSMUST00000021234 2 6 14 87 11 94285025 94287106 GAGAAGGAATCTAATGTTGGAC 58 94280259 94280277 AGAGTAGTAGGGTTTGCAC 58 NA Mus musculus 50 Rps6ka5 ENSMUSG00000021180 ENSMUST00000110076 3 1 2 80 12 101809200 101812649 CACGATCAGCTTCATACGT 59 101809138 101809157 GTGCTTCTTTCTCTTGATGC 59 NA Mus musculus 50 Nln ENSMUSG00000021710 ENSMUST00000022223,ENSMUST00000109315 2 2 3 81 13 104827431 104827450 CATTATAGAGACGGACACCC 59 104827054 104827387 TCAGAAGACCTGTGTTGAC 59 NA Mus musculus 50 Cenpk ENSMUSG00000021714 ENSMUST00000070761,ENSMUST00000099187,ENSMUST00000022227 1 3 3 125 13 105020944 105022743 GAAAGACATGGAAGATTGTCAG 59 105024261 105024279 CATTGACCAAGTTCAGCAG 59 NA Mus musculus 50 Slc4a7 ENSMUSG00000021733 ENSMUST00000057015,ENSMUST00000090583,ENSMUST00000074344 2 3 3 81 14 15570793 15570811 GGAGTTGTATCCTGAATGG 57 15570855 15572254 TTGTCTAACACCATATCTGC 57 NA InUTR Mus musculus 50 Ndufs4 ENSMUSG00000021764 ENSMUST00000022286 1 1 1 60 13 115098041 115098059 CAAAGAAGATGCAATTGCC 57 115079049 115079068 CTTCTCTTCCACATCATAGC 57 NA DesignNoJunction Mus musculus 50 Samd4 ENSMUSG00000021838 ENSMUST00000022386,ENSMUST00000111809 3 2 5 81 14 47672774 47683901 GTAGTGGTATGAAAGATGTTCC 58 47683942 47683961 TAAGTCATCTGCGAGAAGAG 58 NA Mus musculus 50 Sema5a ENSMUSG00000022231 ENSMUST00000100726 1 1 2 89 15 32611344 32611362 GGCCTTGTGTATTTGACTC 58 32612100 32614265 CATAGAAGTCTCCACACCT 57 NA Mus musculus 50 2610110G12Rik ENSMUSG00000024426 ENSMUST00000061052,ENSMUST00000077494,ENSMUST00000025296,ENSMUST00000056034 2 4 5 111 17 36041246 36041264 TCTTTGAAGGCTTCTTTGC 58 36038547 36038937 ACCTTCAGGAATTCTCTGTC 59 NA Mus musculus 50 Tcof1 ENSMUSG00000024613 ENSMUST00000078036,ENSMUST00000097562,ENSMUST00000057579 3 3 3 108 18 60995550 60997558 ATGTCGAGGTGAAATCTCC 59 60995460 60995479 ACATTCCCTAACTTGGTAGG 58 NA Mus musculus 50 Men1 ENSMUSG00000024947 ENSMUST00000113504,ENSMUST00000056391,ENSMUST00000113502,ENSMUST00000079327,ENSMUST00000113503,ENSMUST00000113500,ENSMUST00000078137 1 7 7 96 19 6337506 6337606 GGACATCTGGAAAGATACCC 59 6337665 6337683 GATAAAGGGTGAGTGGGTC 59 NA Nonspecific Mus musculus 50 Rbp4 ENSMUSG00000024990 ENSMUST00000112335,ENSMUST00000025951 1 2 2 112 19 38191391 38192772 TGAACACAATGGTTACTGTC 58 38191298 38191317 AAATAGAGATGAAGACCGGA 57 NA InUTR Mus musculus 50 R3hdm2 ENSMUSG00000025404 ENSMUST00000077046,ENSMUST00000105251 3 2 5 122 10 126918840 126921040 AGTACAACATGGCAGAAGAC 59 126921125 126921143 GATGCTGGGAGATAAGTGG 59 NA Mus musculus 50 Rpe ENSMUSG00000026005 ENSMUST00000113995,ENSMUST00000027157,ENSMUST00000087314 3 3 3 84 1 66753088 66761158 ACCCTTTCTTTGATATGCAC 58 66761204 66761223 GTATATTGATTGGCACCTGC 59 NA Mus musculus 50 Dst ENSMUSG00000026131 ENSMUST00000097785,ENSMUST00000097786,ENSMUST00000097789 2 3 8 88 1 34352320 34352338 TAGCCAAGTGTAAGTGTGC 59 34353594 34356574 GTCTCCAAACTGATTTCCCA 59 NA Mus musculus 50 Pik3c2b ENSMUSG00000026447 ENSMUST00000077730 1 1 2 80 1 134998911 134998931 GAGGAAGGAGGAGTTAAATGG 59 134998970 134999946 GTATACACCAGATCACACTCAG 59 NA Mus musculus 50 Tor1aip1 ENSMUSG00000026466 ENSMUST00000097528 3 1 3 81 1 157869483 157869502 GAAGATGATCTCGAGAGCTC 59 157867145 157869439 TGGCTTCATCTCTTGACTC 58 NA Mus musculus 50 Dclre1c ENSMUSG00000026648 ENSMUST00000115066,ENSMUST00000115067,ENSMUST00000061852 2 3 7 80 2 3370456 3374820 GAGATGAAATCACAGTGGAC 58 3375969 3375987 TCTTCAGACTCCATTGACC 58 NA Mus musculus 50 Fcgr2b ENSMUSG00000026656 ENSMUST00000097469 2 1 3 80 1 172891354 172893548 AGGAAGTAGACAATCCTCCT 59 172891198 172891216 GCTTGAGAAGTGAGTAGGT 58 NA Mus musculus 50 Pip4k2a ENSMUSG00000026737 ENSMUST00000006912 2 1 3 80 2 18787773 18793926 GAAATACGACTTAAAGGGCTC 58 18774528 18774546 TCCTTTAAAGTTGGCAGCT 59 NA Mus musculus 50 Acbd5 ENSMUSG00000026781 ENSMUST00000114529 2 1 3 186 2 22949861 22949879 AAGATGCTCAGCAATCTCC 59 22950027 22955091 CTATTCCCTACTCTCCCTCTC 59 NA Mus musculus 50 Lrsam1 ENSMUSG00000026792 ENSMUST00000113200,ENSMUST00000028132 1 2 3 85 2 32792012 32792030 AGTGTAATGCAGAAGGCTG 59 32790758 32791965 ATTAGCCTAATCTGGTTCCTG 59 NA Mus musculus 50 Grin1 ENSMUSG00000026959 ENSMUST00000114312,ENSMUST00000114307,ENSMUST00000114318,ENSMUST00000114314,ENSMUST00000114317,ENSMUST00000114310,ENSMUST00000028335,ENSMUST00000114308 2 8 8 80 2 25159299 25159317 GACAGGAAGATCATCTGGC 59 25154047 25159258 TGTCACTATCTTTAGTCTGGTG 59 NA Mus musculus 50 Pkp4 ENSMUSG00000026991 ENSMUST00000102754,ENSMUST00000037903 3 2 3 159 2 59143400 59143418 TCTTACTCTGACAGTGGGT 59 59143541 59146074 CTACTGATGGCTGAACCAG 59 NA Mus musculus 50 Nup35 ENSMUSG00000026999 ENSMUST00000028382 3 1 2 81 2 80495012 80496116 AGCATGTGATGTCTAACAC 57 80496161 80496179 TCTTTGCTTAAGGCTTTCC 57 NA Nonspecific Mus musculus 50 Nusap1 ENSMUSG00000027306 ENSMUST00000068225,ENSMUST00000028771 1 2 2 86 2 119469562 119469582 CAAGTTCTAGTAAGAAGCCAG 58 119469630 119472837 GTTTCAGCTTTCCTTTGTG 57 NA Mus musculus 50 Vps16 ENSMUSG00000027411 ENSMUST00000110274,ENSMUST00000028900 2 2 3 182 2 130264632 130264790 ATCACTCAAGGAGAAGCTG 58 130265364 130265382 AAGTAGGAGTCCTCATCGA 58 NA Mus musculus 50 E2f1 ENSMUSG00000027490 ENSMUST00000000894,ENSMUST00000103145,ENSMUST00000109704 3 3 3 80 2 154390203 154390221 GACTGACCATCAGTACCTC 58 154389838 154390159 GGAGATTTCACACCTTTCC 58 NA Mus musculus 50 Samhd1 ENSMUSG00000027639 ENSMUST00000109550,ENSMUST00000057725 3 2 5 96 2 156927521 156927539 AGAAGAAAGACGGGAAGAG 58 156925226 156927462 ATAATGTCACCATCCTGTGG 59 NA Mus musculus 50 Ttc14 ENSMUSG00000027677 ENSMUST00000108210,ENSMUST00000108208,ENSMUST00000099153,ENSMUST00000076916 3 4 5 90 3 33703381 33703399 ATGTGGATGCTATGAACGA 58 33703452 33703570 GTTGCATATAATGCTCCTCG 58 NA Mus musculus 50 Trim2 ENSMUSG00000027993 ENSMUST00000107692,ENSMUST00000107691,ENSMUST00000107695,ENSMUST00000107693,ENSMUST00000107694,ENSMUST00000065380,ENSMUST00000054990 1 7 7 100 3 83994504 83994522 CAGAAGGCTGTGAAGAGAC 59 83982088 83994440 CTTCCTTTGGTACCGACTC 59 NA Mus musculus 50 Rrh ENSMUSG00000028012 ENSMUST00000078035 1 1 3 80 3 129516255 129518167 CAGATGGATATTTATGCAGGAC 58 129516196 129516214 CCGATCCATAGCTACAACC 59 NA Mus musculus 50 Mapbpip ENSMUSG00000028062 ENSMUST00000029698 3 1 1 112 3 88356324 88356342 TATGATAGGAACGGGAACC 58 88354661 88354680 ATACATAGCAGAAGGTTGGC 59 NA DesignNoJunction Mus musculus 50 4930535B03Rik ENSMUSG00000028106 ENSMUST00000098855 1 1 3 89 3 95589021 95591217 AGAAGCTTTAACATCCACGA 59 95588238 95588256 AGCAACTCTTCAATGAGGG 59 NA Mus musculus 50 Epha7 ENSMUSG00000028289 ENSMUST00000108194,ENSMUST00000029964,ENSMUST00000080934,ENSMUST00000108191 3 4 4 90 4 28865918 28869742 AAATGTTTGAAGCGACAGC 59 28869796 28869814 AACACCAAGATGATGGTCC 59 NA Mus musculus 50 Cntfr ENSMUSG00000028444 ENSMUST00000102962,ENSMUST00000102961,ENSMUST00000084701,ENSMUST00000064443 3 4 4 178 4 41622060 41622078 TCTACACGCAGAAACACAG 59 41617957 41617975 TAAGCTTCGCAGTATCAGC 59 NA DesignNoJunction Mus musculus 50 Slc6a9 ENSMUSG00000028542 ENSMUST00000063857,ENSMUST00000030269,ENSMUST00000102685 3 3 3 112 4 117530070 117536043 GTACTGGAGGCTGTATGTG 59 117536119 117536137 GACAGAGGAAGACAACCAC 59 NA Mus musculus 50 Elavl4 ENSMUSG00000028546 ENSMUST00000106598,ENSMUST00000106601,ENSMUST00000102722,ENSMUST00000106600,ENSMUST00000106594 1 5 9 103 4 109879259 109882357 ATGGCGTAAAGAGGTTCTC 59 109879174 109879192 ATAGACGAAGATGCACCAG 59 NA Nonspecific Mus musculus 50 Csf3r ENSMUSG00000028859 ENSMUST00000106162,ENSMUST00000030673,ENSMUST00000106163 2 3 3 81 4 125719930 125719950 GGCATACTTTGCTTAGTACTC 58 125719992 125720164 AGAAGGAAGTCTTTCCTCTG 58 NA Mus musculus 50 BC008163 ENSMUSG00000028878 ENSMUST00000097856 3 1 3 223 4 132469737 132472047 ATGATCGAAAGAAGGTGGA 58 132459897 132459915 GATGACAAAGTGGTCAGTG 58 NA DesignRelaxed Mus musculus 50 Arhgef19 ENSMUSG00000028919 ENSMUST00000006618,ENSMUST00000105792 1 2 3 123 4 140803364 140803382 GATCTAAACGAGGTCCACG 59 140803534 140803770 AGAGGACAGAATTAAGGAGGA 59 NA Mus musculus 50 Errfi1 ENSMUSG00000028967 ENSMUST00000073600,ENSMUST00000030811 1 2 2 81 4 150239538 150240432 TAACAACTGTTGGATGTGCT 59 150240476 150240494 CTTGACCTTGGAGATGGAC 59 NA Mus musculus 50 Gpr125 ENSMUSG00000029090 ENSMUST00000030971 1 1 2 80 5 50352973 50354938 GATGCTGAGGTTCTACCTG 59 50352911 50352930 TAGTTCTTGATGTTTGCTGC 58 NA Mus musculus 50 Rgs12 ENSMUSG00000029101 ENSMUST00000030984,ENSMUST00000087684 1 2 4 171 5 35317973 35341866 TGATCTTGAGTCTGCAACTG 59 35362113 35362131 AAGGAGACGCTCAAATGAC 59 NA Mus musculus 50 Zfp509 ENSMUSG00000029127 ENSMUST00000094833,ENSMUST00000114114,ENSMUST00000075525 2 3 4 128 5 38597137 38597157 GCCATACATCTGTGAAATCTG 59 38594881 38594986 CTGAAATTGCTGAACCCTC 58 NA Mus musculus 50 Dnajb6 ENSMUSG00000029131 ENSMUST00000114839,ENSMUST00000008733 3 2 3 96 5 30080108 30080126 GAGTTTGGCTTCACATTCC 59 30080183 30090950 CAAATGGGTCTTCAAAGAAGTC 59 NA Nonspecific Mus musculus 50 Stra8 ENSMUSG00000029848 ENSMUST00000031876,ENSMUST00000114999 3 2 2 110 6 34877892 34877910 CCAGTCTGATATCACAGCC 59 34880428 34880892 TTGAAGGATGCTTTGAGCT 59 NA Mus musculus 50 Ephb6 ENSMUSG00000029869 ENSMUST00000031903,ENSMUST00000114732 2 2 3 80 6 41569310 41569328 CTTTGGCATACTCATGTGG 58 41569372 41569616 GCATTTAGTACCTCCTGCT 59 NA Mus musculus 50 Mlstd1 ENSMUSG00000030303 ENSMUST00000032443,ENSMUST00000111607 1 2 2 80 6 148087212 148087231 ATTTACATCCTCGTGAGACC 59 148087272 148094544 CTCAAACAGCTTACTGTTGAG 59 NA Mus musculus 50 Rabep2 ENSMUSG00000030727 ENSMUST00000106407,ENSMUST00000032971 2 2 3 91 7 133573290 133579183 ATCCTGAAAGACTCCATCAG 58 133579237 133579255 TCCTTCTCCTCAAAGTCCT 59 NA Mus musculus 50 Tgfb1i1 ENSMUSG00000030782 ENSMUST00000070656,ENSMUST00000033046,ENSMUST00000092080,ENSMUST00000098011 1 4 4 95 7 135392699 135392821 TTCAGAACCATCTTCCAGC 59 135392880 135392898 CTTTGCTAGTCTGTCCTGG 59 NA Mus musculus 50 Fgfr2 ENSMUSG00000030849 ENSMUST00000033138,ENSMUST00000106209,ENSMUST00000068807 3 3 4 134 7 137328888 137339697 AGACAGGTAACAGTTTCGG 59 137328772 137328790 CTCTGGCAACTCATACTCG 59 NA Mus musculus 50 Tacc2 ENSMUSG00000030852 ENSMUST00000033141,ENSMUST00000098004 1 2 5 153 7 137836499 137860232 CATGAGTTCCGACTCTGAG 59 137860349 137872050 CTCAGAAATGCATCCTGGT 59 NA Mus musculus 50 Smarca1 ENSMUSG00000031099 ENSMUST00000101616,ENSMUST00000077569,ENSMUST00000088973 3 3 6 82 X 45211482 45211501 GATTATTGTATGTGGCGTGG 59 45207882 45211437 GCATCTATCGCTTCCTCTC 59 NA Mus musculus 50 Gripap1 ENSMUSG00000031153 ENSMUST00000115675,ENSMUST00000101694 3 2 4 126 X 7380515 7380727 CTACAAGATCAGGTGTCCAG 59 7381489 7381507 CTTGTGTCTTTGCTGTCTG 58 NA Mus musculus 50 Pqbp1 ENSMUSG00000031157 ENSMUST00000033497,ENSMUST00000115655,ENSMUST00000115654 1 3 3 88 X 7472998 7473126 TAATGCAGATGCTGAGGAC 59 7472928 7472946 CTGGCTTCTCATGACTACG 59 NA Mus musculus 50 Vbp1 ENSMUSG00000031197 ENSMUST00000033540,ENSMUST00000114070 3 2 2 130 X 72762438 72762457 ATTCTTTCATGAAGCAGCCT 59 72762550 72766717 AATCTGACCTTTCAGCCTC 59 NA Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112408,ENSMUST00000112406,ENSMUST00000112403,ENSMUST00000112402,ENSMUST00000112401,ENSMUST00000078682,ENSMUST00000112400,ENSMUST00000112398 2 8 10 86 X 156896774 156896793 ATCTCTTGTCAGTCTCATCC 58 156899311 156903525 CTCTGGGATTTGACTCCTG 59 NA Mus musculus 50 Ash2l ENSMUSG00000031575 ENSMUST00000068892,ENSMUST00000110610,ENSMUST00000110609 2 3 3 94 8 26929022 26929041 ATCTCACTGTACAAGAGCTG 59 26927970 26928083 ATGTCACTCATAGGGTGGT 59 NA Mus musculus 50 Slc7a2 ENSMUSG00000031596 ENSMUST00000057784 2 1 2 81 8 41991069 41993759 CCTTATCAACAAGTCTTCTGG 58 41993802 41993820 CTAAACAGTAAGCCATCCC 57 NA Mus musculus 50 Sin3b ENSMUSG00000031622 ENSMUST00000004494 3 1 2 80 8 75271757 75273625 TCTATGATGAGCACCAGGA 59 75273667 75273687 CCTCATACACGAAGATAAGGT 59 NA Mus musculus 50 Ldhd ENSMUSG00000031958 ENSMUST00000070004 2 1 2 83 8 114152941 114152959 AACGTGATTAACCTGGAGG 59 114152611 114152894 TGCACTCTTCCTGTAATGG 59 NA Mus musculus 50 Ppp2r1b ENSMUSG00000032058 ENSMUST00000034560 2 1 2 97 9 50691613 50691631 TGTGAAGGACAGTGAAGAG 58 50691691 50699731 AAGGTAGAAACTTCCCAGTG 59 NA Mus musculus 50 Ilf3 ENSMUSG00000032178 ENSMUST00000067646,ENSMUST00000115414,ENSMUST00000115413 1 3 3 80 9 21196822 21196840 GTCCTTGACCATCCATCTG 59 21196883 21198170 TTGACTGATAGCGTTTCTCC 59 NA Mus musculus 50 Lrrfip2 ENSMUSG00000032497 ENSMUST00000035078,ENSMUST00000098340 2 2 3 96 9 111092708 111092727 CTAAGTGGGAACTCATCCAG 59 111092786 111102184 CTTCAGACAAAGACTCCCG 59 NA Mus musculus 50 Atp2c1 ENSMUSG00000032570 ENSMUST00000112557 3 1 4 181 9 105337534 105338898 ATACTGTTGGCTAAGGACAG 59 105335145 105337390 AAGGCAAGAACTCTGAGTC 59 NA Mus musculus 50 Mier3 ENSMUSG00000032727 ENSMUST00000109272 2 1 4 81 13 112500001 112501897 GAAAGGCATCTCAAGAAGG 58 112501942 112501960 TTTCCATGAAGCATCAGTG 58 NA Mus musculus 50 Cyb5r4 ENSMUSG00000032872 ENSMUST00000050631 3 1 2 165 9 86927241 86927259 CATGCTGAAAGAATGCCTG 59 86935278 86935342 TGCAGAACTGCTATCACTG 59 NA Mus musculus 50 Phldb2 ENSMUSG00000033149 ENSMUST00000036355 1 1 3 115 16 45775144 45775163 GCAATTCCACGAATCTATCC 58 45772380 45775068 TCTAAAGTGCTCTGAACTCTG 59 NA Mus musculus 50 Ctdspl2 ENSMUSG00000033411 ENSMUST00000036647,ENSMUST00000110581,ENSMUST00000110578,ENSMUST00000110574,ENSMUST00000110572 2 5 7 139 2 121832717 121833468 GCCTATCAGCTTTCTAATGGA 59 121836314 121836333 AATCTGTCTCTGATGTGAGG 58 NA Mus musculus 50 2700078E11Rik ENSMUSG00000033417 ENSMUST00000111460 1 1 2 107 19 60605408 60618927 TTTACAGCCTAATGCAGGT 58 60604942 60604961 AACCGTCACTATCTATACCC 57 NA Mus musculus 50 Rbm9 ENSMUSG00000033565 ENSMUST00000089470,ENSMUST00000109780 1 2 5 80 15 76922271 76928378 CTATCCAGGAATAGTGTTACAGG 59 76916557 76916575 TGTGCATATCTGTAGGCTG 59 NA Mus musculus 50 Usp36 ENSMUSG00000033909 ENSMUST00000106296,ENSMUST00000057088,ENSMUST00000092382 2 3 5 81 11 118136331 118136350 AGAACATCCAATGTCCTGAC 59 118134958 118136287 GATAGCCAACATCCTTGGT 59 NA Mus musculus 50 Tesk2 ENSMUSG00000033985 ENSMUST00000045542 2 1 5 80 4 116474399 116474836 TAACTGCTGTAATATGGACCC 59 116474878 116474896 AAGCGGCTCATAATTTCCT 59 NA Mus musculus 50 Golgb1 ENSMUSG00000034243 ENSMUST00000039855 2 1 2 82 16 36893458 36893476 TCGTCTCCATGAAGATGAG 58 36893522 36894932 GCATCACCCTCAATTTCTG 58 NA Mus musculus 50 Nipsnap1 ENSMUSG00000034285 ENSMUST00000093371 3 1 3 142 11 4783255 4783390 ATCTTCTATTCCAAGGACAGTG 59 4783493 4783741 TTCACGTTGTGAAACTGGA 59 NA Mus musculus 50 Cobll1 ENSMUSG00000034903 ENSMUST00000112431,ENSMUST00000102726,ENSMUST00000072921,ENSMUST00000112422,ENSMUST00000068356 1 5 9 81 2 64941441 64943779 CTTGACCTCTGGTGTAAGC 59 64941378 64941396 CGGATCTTTAGATGCCTCG 59 NA Nonspecific Mus musculus 50 Cobll1 ENSMUSG00000034903 ENSMUST00000112431,ENSMUST00000112430,ENSMUST00000090896,ENSMUST00000072921,ENSMUST00000112422,ENSMUST00000112432 2 6 9 68 2 64940167 64940185 AGGACAGAGTATCTGACAG 57 64937441 64940136 TTTGAACTACACTCTCCTGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Secisbp2 ENSMUSG00000035139 ENSMUST00000040117 3 1 2 100 13 51777993 51778657 CCACACTACATTGAGATTTGG 58 51778717 51778737 TTCATCATCTGAGAGGTTGAC 59 NA Mus musculus 50 Slfn8 ENSMUSG00000035208 ENSMUST00000038141,ENSMUST00000092838 3 2 3 81 11 82818272 82826874 ATTTCAAGTGTCACCAGAC 57 82818209 82818228 CTTTAGTCTCTTATGCTGGG 57 NA Mus musculus 50 2210018M11Rik ENSMUSG00000035401 ENSMUST00000038359,ENSMUST00000098271 1 2 3 83 7 105794963 105794981 CGGTTAACAACAATTGCAC 58 105790160 105793679 ACTATTAGGTCCAGACATACTG 58 NA Mus musculus 50 Ids ENSMUSG00000035847 ENSMUST00000101509,ENSMUST00000114633,ENSMUST00000038111 2 3 3 80 X 67613171 67613190 ATCAGCTAGTCCTTTCTTCC 58 67611599 67613129 AACTTCTGAAATTCCTTGGG 57 NA Mus musculus 50 Cd200r3 ENSMUSG00000036172 ENSMUST00000114612,ENSMUST00000114622,ENSMUST00000048479,ENSMUST00000077178,ENSMUST00000114613,ENSMUST00000114611 3 6 6 83 16 44951589 44951607 ACCGGATGATTCATTTCCT 58 44951651 44953524 GGAGTGATAATCTCAATCTCCA 59 NA Mus musculus 50 Skp1a ENSMUSG00000036309 ENSMUST00000037324,ENSMUST00000109072 3 2 3 90 11 52050356 52050374 GCAGAGTTCTGATGGAGAG 59 52050428 52056099 CATTCCCAAATCTTCCAGC 58 NA Mus musculus 50 Qsox2 ENSMUSG00000036327 ENSMUST00000036187 2 1 3 80 2 26066839 26066858 CCTGAAACAGCACTATAGCA 59 26065298 26066796 GCTCTCAGAACTGATCCAG 59 NA Mus musculus 50 Plxnb2 ENSMUSG00000036606 ENSMUST00000109331,ENSMUST00000060808 1 2 3 82 15 88992547 88992694 AGTTCACTTATCAACAACCC 57 88992484 88992502 ATTGATGGTCAATGTGGTG 57 NA Mus musculus 50 Entpd8 ENSMUSG00000036813 ENSMUST00000114378,ENSMUST00000114376 3 2 4 82 2 24939600 24940256 CAGTTCTATGTGGAAGTCAG 57 24940300 24940319 AATACGAGGATGTACAGACC 58 NA Mus musculus 50 Vps13b ENSMUSG00000037646 ENSMUST00000048646 2 1 2 80 15 35464052 35464070 GCTCCAGATTTGATAGCCT 59 35464113 35501831 ACAAAGAAATACAGCACCAG 58 NA Mus musculus 50 Slc32a1 ENSMUSG00000037771 ENSMUST00000045738,ENSMUST00000109483,ENSMUST00000099132 1 3 3 60 2 158440002 158440020 GGTCATCGCTTACTGTCTC 59 158440043 158440062 GTAGAACTTCACCTTCTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rnf144b ENSMUSG00000038068 ENSMUST00000068891,ENSMUST00000110111 2 2 2 94 13 47335223 47338245 ACCTGGACAATGACATATTCC 59 47338301 47338319 TGTTCGGTTCCACATTACC 59 NA Mus musculus 50 4921517L17Rik ENSMUSG00000038085 ENSMUST00000037096,ENSMUST00000109580 1 2 4 103 2 156191025 156193303 AAGATCAAATCCAGGTTCG 57 156193370 156193388 TGGATCTTCATGTAGACCC 58 NA Mus musculus 50 Tmem16b ENSMUSG00000038115 ENSMUST00000067267,ENSMUST00000041000,ENSMUST00000100935 2 3 3 94 6 125986959 125989268 TATCATCTTCCAGAACCTAGTG 58 125989323 125989341 CTTTCTTGATCTGGTCGCT 59 NA Mus musculus 50 Satb2 ENSMUSG00000038331 ENSMUST00000114415,ENSMUST00000042857 1 2 2 80 1 56954840 56954858 AATGCCTTAAAGGAACTGC 58 56948098 56954798 TGAAATCATACTCTGGGAGAG 58 NA Mus musculus 50 Zfp280d ENSMUSG00000038535 ENSMUST00000043096 1 1 3 80 9 72186637 72186655 TGAAACTCATTCTTGCCGA 59 72186845 72187431 CTTCTGCATTCAGAAAGACG 59 NA Mus musculus 50 Ttll6 ENSMUSG00000038756 ENSMUST00000107681,ENSMUST00000107680,ENSMUST00000035282 3 3 3 80 11 96018049 96018069 ATCTGATGTCAGAGATACTGC 59 96018111 96020010 TTGGGTATTGTGACTTGGG 59 NA Mus musculus 50 Tlr4 ENSMUSG00000039005 ENSMUST00000107365 1 1 2 84 4 66585509 66590056 CTTTCTTACCAGAGGGCAG 59 66590104 66590122 TAATATCGTGCCTCGTGTC 59 NA Mus musculus 50 Stim2 ENSMUSG00000039156 ENSMUST00000071083,ENSMUST00000087347 2 2 3 80 5 54493861 54493881 GTTGAACTGCCACAATATGAG 59 54493922 54494827 TTCATGAACTGCTATCCTGG 59 NA Mus musculus 50 Cdk5rap2 ENSMUSG00000039298 ENSMUST00000098013 1 1 3 169 4 69915692 69915710 TACTGAGAAGTACCCAGCA 59 69910524 69911397 TCAAATTCCCTTGGTCAGTC 59 NA Mus musculus 50 Stau1 ENSMUSG00000039536 ENSMUST00000109235,ENSMUST00000109238,ENSMUST00000109236,ENSMUST00000088055,ENSMUST00000049412 2 5 5 80 2 166785614 166788940 GAAAGGTTGGAGGTAAATGG 58 166785553 166785571 CGCAATTTCAAACACTTGG 58 NA Mus musculus 50 Ccbl1 ENSMUSG00000039648 ENSMUST00000113665,ENSMUST00000113660 3 2 8 143 2 30043759 30043777 CTTGTTCACAGCCTTTCAG 58 30042814 30043579 TTCTTAGAGAATACCAGCCTC 58 NA Mus musculus 50 Arhgap29 ENSMUSG00000039831 ENSMUST00000037958 1 1 2 80 3 121714433 121714452 CTGTTATCACCAGATGAGAG 57 121714494 121714997 TGAACTACGGATATCTTCCT 57 NA Mus musculus 50 Rere ENSMUSG00000039852 ENSMUST00000105682,ENSMUST00000037916 3 2 4 162 4 149805692 149813459 ACTTCAAACTGGTCCACAG 59 149842810 149842829 TTCATGAGTAGATGGTCCCT 59 NA Mus musculus 50 Rbms2 ENSMUSG00000040043 ENSMUST00000099139,ENSMUST00000092033,ENSMUST00000105247,ENSMUST00000076233 2 4 4 192 10 127580603 127582741 ACAAATGGCAAAGCAACAG 59 127575232 127575250 ACACTTCTCTGTTGACTCC 58 NA Mus musculus 50 Dnm3 ENSMUSG00000040265 ENSMUST00000086074,ENSMUST00000070330 2 2 2 81 1 164241567 164241588 GGAGTTCAATGAGAAAGAACTG 59 164238122 164241525 AGTAAACAACCCTGTCCTG 59 NA Mus musculus 50 A330021E22Rik ENSMUSG00000040473 ENSMUST00000054865 1 1 2 83 5 5617372 5618955 CTGTACAGCTATTAATCGATGG 58 5617310 5617329 ACTCCATGATCTTGAGTCTC 58 NA Mus musculus 50 Wdr7 ENSMUSG00000040560 ENSMUST00000097552 3 1 2 112 18 63939598 63953884 ACAGATTAAACAAGGCTGGA 59 63953959 63953977 ATCTTCGAGCTAGCATCTC 58 NA Mus musculus 50 Agbl2 ENSMUSG00000040812 ENSMUST00000099743,ENSMUST00000111483,ENSMUST00000111482,ENSMUST00000111481 2 4 7 105 2 90653502 90655509 GAATTCAGAGTAAGAAGCCAG 58 90655576 90655594 GTCTTAGACCAGTTTGGCT 59 NA Mus musculus 50 Psme4 ENSMUSG00000040850 ENSMUST00000041231,ENSMUST00000093224 1 2 3 80 11 30712154 30713672 GTAAGTGCATGATCACATTCC 59 30713713 30713732 CTTGCAGTACAGATGAACAG 58 NA Mus musculus 50 E130014J05Rik ENSMUSG00000040943 ENSMUST00000041994,ENSMUST00000098603 1 2 2 80 3 133144384 133146215 TCATGGAAGAAAGGTATGGAG 59 133144324 133144342 AGCTCTTGCCTTCTTTACC 59 NA Mus musculus 50 Pla2g5 ENSMUSG00000041193 ENSMUST00000102513,ENSMUST00000102512,ENSMUST00000030524,ENSMUST00000102511 3 4 4 84 4 138360473 138360494 TTAAGAACTATGGCTTCTACGG 59 138357362 138360428 ATCTGACAGCACCAATCAG 59 NA Mus musculus 50 Tardbp ENSMUSG00000041459 ENSMUST00000084125,ENSMUST00000055827,ENSMUST00000105699,ENSMUST00000105700,ENSMUST00000095719,ENSMUST00000045180 2 6 6 98 4 147996127 147996145 CCTCATAGTGTTGGGTCTC 59 147994831 147996065 TCTTTCTTGACCTGAACCA 58 NA Mus musculus 50 Usp48 ENSMUSG00000043411 ENSMUST00000105842 1 1 10 93 4 137189304 137189322 TAGCAAACGAGCAGAAGAC 59 137189378 137200274 TTGGTACTTCCATTGCTCTC 59 NA Mus musculus 50 Klhl15 ENSMUSG00000043929 ENSMUST00000113916,ENSMUST00000113915 3 2 5 81 X 91498433 91498451 TGTCTGATGACTCCATCCA 59 91517725 91517743 CTTCATATCGGAGCTGTCG 59 NA DesignNoJunction Mus musculus 50 Alkbh2 ENSMUSG00000044339 ENSMUST00000112279,ENSMUST00000053657 2 2 2 117 5 114575631 114575649 TTTCTGGTCTTACCCTGAC 58 114574255 114575550 TCTTTGTACCTGTTCACGA 58 NA Mus musculus 50 Suv420h1 ENSMUSG00000045098 ENSMUST00000113973,ENSMUST00000113972,ENSMUST00000113968,ENSMUST00000052699,ENSMUST00000113970,ENSMUST00000113967 3 6 9 128 19 3793168 3793188 GGTTCTTGATCCCTACTTAGG 59 3796702 3802086 ATAGGCCGAAATCTCACAG 59 NA Mus musculus 50 Ing1 ENSMUSG00000045969 ENSMUST00000116493,ENSMUST00000054399 1 2 2 60 8 11561740 11561759 GCGAAACAATGAGAATCGAG 59 11561782 11561800 TGAGGTGATGTCATCATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 B3gntl1 ENSMUSG00000046605 ENSMUST00000067399 1 1 2 80 11 121485530 121491194 GTCCTTGAGATGACCATCTG 59 121485469 121485487 GATGGTGAAGGACTTCCAG 59 NA Mus musculus 50 C87436 ENSMUSG00000046679 ENSMUST00000050497,ENSMUST00000113700,ENSMUST00000113698 1 3 3 80 6 86415950 86419751 CAAAGTTGGTAACACTTCCC 58 86419794 86419812 GACTGTGGGAGGATATCTG 58 NA Mus musculus 50 Sstr2 ENSMUSG00000047904 ENSMUST00000106630,ENSMUST00000067591 1 2 2 60 11 113485753 113485771 CACGCTGGTCATTTATGTC 58 113485795 113485813 GTAGATGTTGGTGATGGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Kcna1 ENSMUSG00000047976 ENSMUST00000055168 1 1 1 60 6 126592123 126592142 TCAACTATTTCTACCACCGA 58 126592082 126592100 CTAACATGGAGCAACTGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 D930001I22Rik ENSMUSG00000048486 ENSMUST00000109418,ENSMUST00000088333 2 2 2 60 2 163295306 163295327 ATGGGTATTGGTATCTGAAGTC 59 163295267 163295285 GTCAAACTACAACTCTGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem136 ENSMUSG00000048503 ENSMUST00000061833 3 1 1 79 9 42921570 42921589 GCTTATATTGGCTTCATCGA 57 42919908 42919926 AGAACGTGAACTTGGAGAG 59 NA DesignNoJunction Mus musculus 50 Morc2b ENSMUSG00000048602 ENSMUST00000053896,ENSMUST00000087649 2 2 2 60 17 33273924 33273945 CAGACCTTTCTCCAAATATCCT 59 33273885 33273904 TACATGGAAAGACGACTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lingo1 ENSMUSG00000049556 ENSMUST00000053568,ENSMUST00000114256,ENSMUST00000114247 3 3 3 60 9 56468437 56468456 CTCAACATCAATGCCATCAG 59 56468396 56468417 CTAAGACCTTAAGTCGGTACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Snx21 ENSMUSG00000050373 ENSMUST00000056181 1 1 1 112 2 164612324 164612342 ATGTTGTCAAAGACCCTCC 59 164617275 164617293 CTCAAAGTCCGAGTATCGG 59 NA DesignNoJunction Mus musculus 50 Sepn1 ENSMUSG00000050989 ENSMUST00000060435,ENSMUST00000084231 2 2 2 63 4 134098346 134098635 TCAAGAAGGTCAACTACCTG 58 134098302 134098320 AGTTTCTTCTCAGCTCTGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Zfp579 ENSMUSG00000051550 ENSMUST00000108572,ENSMUST00000040415 2 2 2 109 7 4944859 4944877 GAGGAGATGGACAGTAAGG 58 4944768 4944786 TCTTCCTTACTGCAAACCG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000111882 2 1 14 82 2 76732765 76732785 TCTTAAACCTCTACTCAGTGG 58 76732467 76732721 AAATTTCGGTGGTTCAACG 59 NA Mus musculus 50 Lins2 ENSMUSG00000053091 ENSMUST00000077967 1 1 2 130 7 73854206 73854224 TTTCTGCCAGAAGCATCTC 59 73854318 73855059 GCTGCTTTAGACTTTCTGC 59 NA Mus musculus 50 Gpr120 ENSMUSG00000054200 ENSMUST00000067098 2 1 1 84 19 38181967 38181987 GGTCATTGTGATCAGTTACTC 58 38188137 38188155 CTCAGAGTATGCCAAGCTC 59 NA DesignNoJunction Mus musculus 50 Cstl1 ENSMUSG00000055177 ENSMUST00000068607,ENSMUST00000109955,ENSMUST00000109952 2 3 4 144 2 148576877 148580347 AAGGTCAGATGCAGTTGAC 59 148581001 148581019 AGTGATTTGCAAATCAGGC 59 NA Mus musculus 50 Ntrk2 ENSMUSG00000055254 ENSMUST00000078541,ENSMUST00000079828,ENSMUST00000109838 1 3 5 96 13 58910215 58910233 GATTTGGTGTACTGAGCCT 59 58910293 58939166 TGCAATGAGAATTTCCGTG 58 NA Mus musculus 50 Tead1 ENSMUSG00000055320 ENSMUST00000059768 2 1 3 109 7 119903125 119903143 CATCTTATCAGACGAAGGC 57 119982990 119985417 GTATATGACTAGACACCTGCT 58 NA Mus musculus 50 Trim34 ENSMUSG00000056144 ENSMUST00000106850 2 1 8 153 7 111407942 111483814 TTGAAATGGAGTCAGATCTGG 59 111484187 111484206 ACATCTGCAACTTCTTACCC 59 NA Mus musculus 50 Rage ENSMUSG00000056458 ENSMUST00000021701 3 1 4 82 12 112048981 112050001 CTAAGTTCAAACAGTCGAGAG 58 112048919 112048938 CAAATTGGCTGTCAGTAGAG 58 NA Mus musculus 50 Atpbd4 ENSMUSG00000057147 ENSMUST00000102542,ENSMUST00000028640 2 2 3 96 2 114345517 114345535 GGACTCTTCAGAAGCAGTC 59 114344020 114345457 TGACGACACTTTCTCTTCC 59 NA Mus musculus 50 Eml1 ENSMUSG00000058070 ENSMUST00000054955,ENSMUST00000109860 1 2 3 83 12 109740617 109744696 CATTCAGTCCAGAAGAAGGA 59 109744742 109744760 AATCCACTTGGTCTTTGGG 59 NA Mus musculus 50 Pde1a ENSMUSG00000059173 ENSMUST00000102654 2 1 7 142 2 79767945 79878632 CCAAAGACCCATCTTTCGA 59 79746319 79767839 CCAGCAGTCTTCTTGTCTC 59 NA Mus musculus 50 Ntng1 ENSMUSG00000059857 ENSMUST00000072596 1 1 6 87 3 109635442 109635460 AGCACTGTGAGTTATGCAG 59 109585817 109635391 TCGCAGACATTAGCTATGC 59 NA Mus musculus 50 9430015G10Rik ENSMUSG00000059939 ENSMUST00000072554 3 1 2 162 4 155496126 155496467 AGTGTAGAATTCTCACTGGC 59 155497710 155497728 TAGAAGAATCCAGCCACAG 58 NA Mus musculus 50 Dlgap4 ENSMUSG00000061689 ENSMUST00000000094,ENSMUST00000070782,ENSMUST00000109568,ENSMUST00000109567,ENSMUST00000109566,ENSMUST00000099145 3 6 6 81 2 156587596 156587614 AAGTTCGATGAGCTCTACC 58 156587659 156588433 GCTTCTTCTCTTCCTTCCT 58 NA Mus musculus 50 Inadl ENSMUSG00000061859 ENSMUST00000107035,ENSMUST00000107034 1 2 10 86 4 98104091 98104109 GGAAGCAGAGGAAATTGGA 59 98104159 98107772 GAGCCTGGAACTTTCTCTG 59 NA Mus musculus 50 Zscan20 ENSMUSG00000061894 ENSMUST00000084276,ENSMUST00000097877,ENSMUST00000106082 3 3 3 192 4 128265424 128265442 AGATGGACTCACTGATGAG 58 128264079 128265268 AACTCAAATCCTGCATCTG 57 NA Mus musculus 50 Nupl1 ENSMUSG00000063895 ENSMUST00000111241,ENSMUST00000041905 1 2 2 80 14 60853114 60853134 GCCGAAATAGCTTTAAGAACC 59 60851490 60853074 TATTCTGAAGTAGTCAGCAGG 58 NA Mus musculus 50 Dppa1 ENSMUSG00000064010 ENSMUST00000077173,ENSMUST00000109227 2 2 2 81 11 46426471 46426493 GGACCTCTATATTGGAATCTCTG 59 46423972 46426433 GTGTCTGCACTTTATGATAGTC 58 NA Mus musculus 50 Olfr329 ENSMUSG00000064252 ENSMUST00000072373 3 1 1 72 11 58356634 58356652 CTGACACTAGTAGGGTCAG 58 58356580 58356600 GATAACAAATGGCCACATAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Akap13 ENSMUSG00000066406 ENSMUST00000065516 2 1 4 88 7 82822343 82822361 GATGCAGAAATGAACCAGC 59 82824753 82828291 CACCAGCTCATACTTCTCC 59 NA Mus musculus 50 Hmgn3 ENSMUSG00000066456 ENSMUST00000085287,ENSMUST00000113220 3 2 2 112 9 83004703 83005834 CAGCTAAGAAAGAACCTGG 57 83004609 83004628 TTTAGTGTCACCATTTGCAG 58 NA Mus musculus 50 Gjd2 ENSMUSG00000068615 ENSMUST00000090275 2 1 1 60 2 113838845 113838864 GAATGGACCATCTTGGAGAG 59 113838804 113838822 CAATCATAGTGGAGTGCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Col28a1 ENSMUSG00000068794 ENSMUST00000115537,ENSMUST00000090669 2 2 2 80 6 7965037 7967043 TTGAAATATGTGGTTGTGGG 58 7964976 7964994 CCACACTTTCTGAACTGTC 58 NA Mus musculus 50 Zfp748 ENSMUSG00000069204 ENSMUST00000091522 3 1 2 91 13 67646277 67646295 ATGAGAAGAGACAAGTGGC 59 67643791 67643809 GAGTGAGTTCCAATCACAG 57 NA DesignNoJunction Mus musculus 50 C78339 ENSMUSG00000069237 ENSMUST00000099547,ENSMUST00000091627 1 2 2 81 13 46766687 46768923 CAGTGGAATAAAGGACATCTC 58 46768966 46768984 CAGGTCTTCCATTGATGTG 58 NA Mus musculus 50 4933437K13Rik ENSMUSG00000071669 ENSMUST00000115813,ENSMUST00000096273 1 2 2 80 16 11660652 11660671 CTGATCAATGTCTGGATCCC 59 11660712 11715018 CCGAATGTAGACCTGATACAC 59 NA Mus musculus 50 D14Ertd449e ENSMUSG00000072680 ENSMUST00000100819,ENSMUST00000022417,ENSMUST00000100818 1 3 3 88 14 26745059 26745293 TAAGGAATGGGTATTGGCT 57 26744375 26744393 GTCTGTGATTCCTTTACGC 58 NA Nonspecific Mus musculus 50 EG668322 ENSMUSG00000074193 ENSMUST00000098547 3 1 1 272 7 31948904 31948923 TTATTTCTGCTCCAACAGTC 57 31955371 31955389 GAGACCTGCTACTTCTGAG 58 NA DesignNoJunction, InUTR Mus musculus 50 Gm561 ENSMUSG00000074754 ENSMUST00000099287 3 1 1 66 2 144419913 144419931 TTTCCTTTCACGGAAACAG 58 144420803 144420821 TTCATTCCTTGAGCCATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 AW112010 ENSMUSG00000075010 ENSMUST00000099676 3 1 1 87 19 11122784 11122802 CGTCGTTAAAGTCTTCTGC 58 11122530 11122548 ACTTGAGGTTTCCAGTGTG 59 NA DesignNoJunction Mus musculus 50 IGKV1-35 ENSMUSG00000076573 ENSMUST00000103374 2 1 1 60 6 69961060 69961078 TGTTTGAACAGGAATCTGG 57 69961018 69961036 AAATCTGTTCCAGACCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2A668_MOUSE ENSMUSG00000078695 ENSMUST00000107584,ENSMUST00000107585,ENSMUST00000107583 2 3 3 64 11 97547926 97549591 AAGAATCAGCCCTTCTGTG 59 97549619 97549637 AACTTGAGTGGAGAAAGGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 3100002L24Rik ENSMUSG00000078903 ENSMUST00000109061,ENSMUST00000109060,ENSMUST00000109058,ENSMUST00000109056 3 4 10 93 2 174958701 174958720 CCTATAGGAATCTCACAGCT 57 174957262 174958439 CTTTCATGCCTTCCATGAC 58 NA Nonspecific Mus musculus 50 ENSMUSG00000068790 ENSMUSG00000079369 ENSMUST00000112738,ENSMUST00000112737,ENSMUST00000112735 1 3 3 81 14 6732757 6732777 CAATGACATGGAGGAAATGTG 59 6731747 6732717 GTTGAATTCAGTGTTCATCCTG 59 NA Nonspecific Mus musculus 50 Hist1h3i ENSMUSG00000069265 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 P42pop ENSMUSG00000074355 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Alox12 ENSMUSG00000000320 ENSMUST00000000329,ENSMUST00000108574 2 2 2 97 11 70063753 70064965 CCATGGCTATCCAGATTCAG 59 70063675 70063693 GATCTTAGCCAAGAGCCAG 59 NA Mus musculus 50 Mx1 ENSMUSG00000000386 ENSMUST00000023655,ENSMUST00000113768 1 2 2 113 16 97677915 97677933 TGAGGAAGCTGAAAGAAGG 59 97677242 97677840 AGTTCTGACCCTTGTTAATGG 59 NA Mus musculus 50 Raf1 ENSMUSG00000000441 ENSMUST00000112949,ENSMUST00000000451 3 2 2 81 6 115572942 115572960 CCAGGAGACCAAATTCCAG 59 115571865 115572898 CTTTGCATGCAAATAGTCCA 59 NA Mus musculus 50 Dynlt1 ENSMUSG00000000579 ENSMUST00000092966 1 1 1 80 17 6650110 6653215 GTAAAGGAGGCTATAGAAAGC 57 6650050 6650068 TAGGACATTAGTGGTCCAC 57 NA Nonspecific Mus musculus 50 Zfp276 ENSMUSG00000001065 ENSMUST00000001092 3 1 1 84 8 125782279 125783338 CTTTCTGAGGGAGACTTCC 58 125783386 125783404 GGTAAGGCTCAAAGGACTC 59 NA Mus musculus 50 Slc19a1 ENSMUSG00000001436 ENSMUST00000105410,ENSMUST00000092387 1 2 2 108 10 76501231 76501249 CTATCTCTGCTTCTTCGGC 59 76501321 76504575 GATCTCGTTAGTCACCTGC 59 NA Mus musculus 50 4930432K09Rik ENSMUSG00000002240 ENSMUST00000101056,ENSMUST00000002310 1 2 2 84 5 88272516 88272534 AAACCACAGGTACTTGAGC 59 88272582 88275338 GTTTGTTCATTGGCACCTG 59 NA Mus musculus 50 Rab8a ENSMUSG00000003037 ENSMUST00000003121,ENSMUST00000098631 1 2 2 80 8 74698490 74699744 GAACATTGAAGAGCATGCC 59 74699787 74699806 ACCTGTCTCTTGTCATTCAC 59 NA Mus musculus 50 Psg18 ENSMUSG00000003505 ENSMUST00000003597,ENSMUST00000098783 1 2 2 80 7 18931467 18934439 ACATCCATCAGCTTGTGAC 59 18931405 18931424 AAGTGAAGACAACTGAGCTC 59 NA Mus musculus 50 Gstm5 ENSMUSG00000004032 ENSMUST00000004134 3 1 1 84 3 107701126 107701144 AACCGTATATTTGAGCCCA 58 107701192 107701384 CAATCTTCTCCAAAGCCTC 58 NA Mus musculus 50 Pcp2 ENSMUSG00000004630 ENSMUST00000111056,ENSMUST00000004749 3 2 3 112 8 3624586 3624606 AATCTCATGGATATGCTGGTC 59 3623545 3624512 TTCTGCATTCCATCCTTGG 59 NA Mus musculus 50 Cabp5 ENSMUSG00000005649 ENSMUST00000005791,ENSMUST00000086152 3 2 2 102 7 13988680 13988699 GACTTTGTGGAACTGATGAC 58 13988764 13990764 CTCCATTGGCATCAAACTC 58 NA Mus musculus 50 Dnase1 ENSMUSG00000005980 ENSMUST00000006136 3 1 1 86 16 4038983 4039001 AACAGAAGCTGTGAGTGAG 59 4039050 4039143 ATGAACATGATGTCCTCCAG 59 NA Mus musculus 50 Vax1 ENSMUSG00000006270 ENSMUST00000006432,ENSMUST00000111478 3 2 2 217 19 59243116 59243134 ATCCGAGAAATCATCCTGC 59 59241221 59241239 TCCTTCTTCTGCTTAGTCC 58 NA DesignNoJunction Mus musculus 50 Raver1 ENSMUSG00000010205 ENSMUST00000115487,ENSMUST00000010349 3 2 3 114 9 20881077 20883662 TTATCCCACAGATGTGGGA 59 20880522 20880540 CTCATTGAAGCTGCTAGGT 59 NA Mus musculus 50 Brf1 ENSMUSG00000011158 ENSMUST00000011302 2 1 1 83 12 114217949 114217968 GTTAACGTGTATGTGTTGGG 59 114211822 114217903 CAAGCATGGGTCTATAGCT 58 NA Mus musculus 50 2310076L09Rik ENSMUSG00000011305 ENSMUST00000019808,ENSMUST00000113072 1 2 2 107 17 56253395 56253413 ATCTCGCCTATGAACACTC 58 56252391 56253324 TCTGCATATGCTGGATCAG 59 NA Mus musculus 50 2200002J24Rik ENSMUSG00000013083 ENSMUST00000013227 2 1 1 137 7 31484985 31485268 CTGTTCTCCCTTAAGACCC 58 31485368 31485387 TAATCTAATAGAGCTGGCCA 57 NA DesignRelaxed Mus musculus 50 Bicc1 ENSMUSG00000014329 ENSMUST00000014473,ENSMUST00000105435,ENSMUST00000105434,ENSMUST00000105433 3 4 4 81 10 70410672 70412696 ACTGGACTAGGTTTATTGGG 58 70410610 70410628 TGTTGAGAGCATTCAGGAG 59 NA Mus musculus 50 NP_001028591.2 ENSMUSG00000014686 ENSMUST00000014830 3 1 1 83 7 20441698 20443183 AACTTGACGGTATACTTCGG 59 20441634 20441653 GTCCACTTTAATAGTGCAGC 58 NA Mus musculus 50 Gorasp2 ENSMUSG00000014959 ENSMUST00000112209,ENSMUST00000028509,ENSMUST00000112201,ENSMUST00000112205 2 4 4 80 2 70516655 70517492 ATACCGTCATGAATGAGTCTG 59 70517534 70517552 TGTACACGTAGAGCTTCAG 58 NA Mus musculus 50 Actn1 ENSMUSG00000015143 ENSMUST00000021554 2 1 1 80 12 81297963 81297981 GTTACTCCTGTGGTGTCAG 59 81297449 81297920 CCATCTTTCCAACTGATGTG 58 NA Mus musculus 50 Prpsap1 ENSMUSG00000015869 ENSMUST00000106391,ENSMUST00000106390,ENSMUST00000021153 1 3 3 88 11 116333632 116334271 TTGCGATTATAGTGGATGAC 57 116333563 116333581 GATCTTGTAAGCACCTCTC 57 NA Mus musculus 50 Gtf2ird2 ENSMUSG00000015942 ENSMUST00000016086 3 1 1 88 5 134690524 134692009 CTTGAACTCAGTAATGTGGG 58 134692060 134692078 TCCACGAAGAAATAGGCTC 59 NA Mus musculus 50 Ncf1 ENSMUSG00000015950 ENSMUST00000111275,ENSMUST00000016094 2 2 2 82 5 134701661 134702468 GAATAACGTAGCTGACATCAC 58 134701599 134701617 CTGTTCCCGAACTCTTCTC 59 NA Mus musculus 50 Cd40 ENSMUSG00000017652 ENSMUST00000017799,ENSMUST00000073707,ENSMUST00000081310,ENSMUST00000109305 1 4 4 80 2 164888275 164888528 ACTGTGAACCCAATCAAGG 59 164888571 164888590 GTCCTTCCTTACAGGTACAG 59 NA Mus musculus 50 Slc35b4 ENSMUSG00000018999 ENSMUST00000019143 1 1 1 80 6 34110538 34111683 TTTATAATCACGCCCTTCC 57 34110476 34110495 ACTTATTGAACAGGACAACG 58 NA Mus musculus 50 2610027L16Rik ENSMUSG00000019297 ENSMUST00000019441 3 1 1 84 14 56365439 56368178 AGTCGTCTGAAACACAGAG 59 56368226 56368244 TGAAGGCGATTCAAGAAGG 59 NA Mus musculus 50 D10Bwg1379e ENSMUSG00000019852 ENSMUST00000019999 2 1 1 80 10 18319099 18320252 TTTCTACACTCAGACATCAGG 59 18319039 18319057 CACGCATACTACCAGTAGC 59 NA Mus musculus 50 Prkar1a ENSMUSG00000020612 ENSMUST00000106677,ENSMUST00000020932,ENSMUST00000106676,ENSMUST00000049527 1 4 4 136 11 109521470 109522356 CCTACGTTAGAAAGGTTATTCC 58 109522614 109522632 GGAGACTGGAAACATAGCA 58 NA Mus musculus 50 Fbxl20 ENSMUSG00000020883 ENSMUST00000103143,ENSMUST00000107549,ENSMUST00000075071,ENSMUST00000107551 3 4 4 81 11 97961343 97961361 GCATTCAAGCACTAGTGAG 58 97959792 97961299 AGAGCTTCATCTTCTAGCTG 58 NA Mus musculus 50 Ttc8 ENSMUSG00000021013 ENSMUST00000079146,ENSMUST00000085109 1 2 2 81 12 100184811 100195497 CGATGTTAAGATGGCTTTGG 59 100195541 100195559 AATCTGTACCTTCCACCAC 58 NA Mus musculus 50 Ppp2r5e ENSMUSG00000021051 ENSMUST00000021447,ENSMUST00000101303 2 2 2 81 12 76569547 76569565 ACAGTTCCTGGTGAAAGTG 59 76567818 76569503 TATACAATACGCCAGCTGTG 59 NA Mus musculus 50 Fbln5 ENSMUSG00000021186 ENSMUST00000021603 2 1 1 80 12 103009501 103009519 CACTGAAGGAGGTTACACC 59 103006704 103009460 CGACATTCATCAATATCTAGGC 58 NA Mus musculus 50 Susd3 ENSMUSG00000021384 ENSMUST00000021816,ENSMUST00000058196 2 2 2 176 13 49332886 49332904 ACAACCACAATAACAGCAG 58 49326636 49326654 AAGTCCAAGGGTCTTTGTC 59 NA DesignNoJunction Mus musculus 50 Ctsq ENSMUSG00000021439 ENSMUST00000021888 2 1 1 88 13 61140508 61140802 AAATTATACAGTCCGGAGGA 57 61140439 61140457 GAATTCTCCCTGTTATGCA 57 NA Mus musculus 50 Auh ENSMUSG00000021460 ENSMUST00000110031 1 1 2 60 13 53014409 53014428 AGATAAGAAAGTTCGGACCA 58 53008429 53014386 AACAGCACAGAATATCCCA 58 NA DesignNoJunction Mus musculus 50 Fancc ENSMUSG00000021461 ENSMUST00000021916,ENSMUST00000073029,ENSMUST00000099444 2 3 3 86 13 63431920 63433159 GAAATGTTCAGGTTTGTGCT 59 63431853 63431871 TTCTACCAAGCACGATGTG 59 NA Mus musculus 50 1110018J18Rik ENSMUSG00000021482 ENSMUST00000021938,ENSMUST00000099434 3 2 2 111 13 64410227 64410410 TCATATTGAGCCTTTCTGC 57 64410134 64410153 GGAGGAAATTTCTTCACCTC 58 NA Mus musculus 50 Hmgcr ENSMUSG00000021670 ENSMUST00000022176 2 1 1 80 13 97436176 97436491 CCCTAAATTTGAAGAGGACG 58 97436115 97436133 TAAATGTACAGGATGGCGA 58 NA Mus musculus 50 Ap3b1 ENSMUSG00000021686 ENSMUST00000022196 1 1 1 80 13 95312818 95317714 TAAGAAGGAGCAAGGAACG 59 95317758 95317776 GAGGGAGTGAAGTTCTGTG 59 NA Mus musculus 50 Rab3c ENSMUSG00000021700 ENSMUST00000022210 2 1 1 129 13 110971301 111050700 AGCTTCAGATTTGGGACAC 59 110971190 110971208 TCTTGTACAGCGTTGAAGG 59 NA Mus musculus 50 Fst ENSMUSG00000021765 ENSMUST00000022287 1 1 1 80 13 115243707 115244499 GATCTTGCAACTCCATCTC 57 115243645 115243664 TGGAAGAGATAGGAAAGCTG 58 NA Mus musculus 50 Samd4 ENSMUSG00000021838 ENSMUST00000022386,ENSMUST00000100672,ENSMUST00000111811,ENSMUST00000111809,ENSMUST00000111805 1 5 5 81 14 47697256 47703181 CTTGTTCATGAGGCATTTACAG 59 47703223 47703241 AAGACCGAAAGAGCTTCTG 59 NA Mus musculus 50 Ktn1 ENSMUSG00000021843 ENSMUST00000089901,ENSMUST00000022391,ENSMUST00000111745,ENSMUST00000111744,ENSMUST00000111743,ENSMUST00000070762 3 6 6 80 14 48321391 48321409 AGAGTTGAAGGCTAAGCAG 59 48322836 48323876 TCTTTCTCATGGATCACTCTC 58 NA Mus musculus 50 Ebpl ENSMUSG00000021928 ENSMUST00000022494 2 1 1 85 14 61960975 61960993 GACTGTTGTCCTAGATGGG 59 61960225 61960927 CAATCTGTACAAAGTGCCTG 59 NA Mus musculus 50 Spry2 ENSMUSG00000022114 ENSMUST00000022709 1 1 1 60 14 106292319 106292337 AACGTCATTGACTATGGGA 58 106292277 106292295 TGGAGCAGTGATAGAAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Jub ENSMUSG00000022178 ENSMUST00000054487 3 1 1 80 14 55189336 55190449 ATTCTAGAGAAGATCCTCCAG 57 55189276 55189294 CAGGCACTTGTTACATACG 58 NA Mus musculus 50 Lrp12 ENSMUSG00000022305 ENSMUST00000022916,ENSMUST00000110305 3 2 2 82 15 39707754 39709348 GAACGGAGATCATTTGAGAC 58 39707691 39707709 AACTGTCCATATGAGGGAG 58 NA Mus musculus 50 Bcl6 ENSMUSG00000022508 ENSMUST00000023151 1 1 1 95 16 23971564 23971582 GAGATGTGCCTCCATACTG 59 23970146 23971505 GAAGGTCCCATTCTCACAG 59 NA Mus musculus 50 Oplah ENSMUSG00000022562 ENSMUST00000023222 1 1 1 83 15 76135625 76135643 CAGATGCTTACCTCACTCC 59 76135479 76135579 CTTGCACATTCTTTAGCTGG 59 NA Mus musculus 50 Lypd2 ENSMUSG00000022595 ENSMUST00000023260 3 1 1 240 15 74563501 74564662 TTGCTATGGCCTTACAGTG 59 74562852 74562870 CATAGGTCAGAATTGCAGC 58 NA DesignNoJunction Mus musculus 50 Chkb ENSMUSG00000022617 ENSMUST00000023289 2 1 1 80 15 89257318 89257768 CTAGAGATCAGTCGGTACTC 58 89257257 89257275 TATAGTGGACATCGAAGCC 58 NA Mus musculus 50 Mfi2 ENSMUSG00000022780 ENSMUST00000023464 3 1 1 104 16 31892885 31894787 ACACAAATGGTCACAATCCT 59 31894854 31894872 CTTGGAACTGGTCTACCTC 58 NA Mus musculus 50 Tfrc ENSMUSG00000022797 ENSMUST00000023486 1 1 1 80 16 32626846 32628570 CAGATATCAGGGATATGGGT 57 32628612 32628631 TTAGTCTAGAAGTAGCACGG 58 NA Mus musculus 50 Sod1 ENSMUSG00000022982 ENSMUST00000023707 2 1 1 81 16 90225442 90225460 GTGTCCATTGAAGATCGTG 58 90225505 90226410 CTTGTTTCTCATGGACCAC 58 NA Mus musculus 50 Leprel2 ENSMUSG00000023191 ENSMUST00000023958 2 1 1 81 6 124806015 124806034 CATGGCTAAGTACAGAAGGA 58 124805286 124805971 ATAAGCTGCCCAGTATAGG 58 NA Mus musculus 50 Wfdc1 ENSMUSG00000023336 ENSMUST00000024107 2 1 1 82 8 122204126 122204938 GAAGTGTTACAAGCAGAGAC 58 122204983 122205001 ATATGGCACTCATAGCCTG 58 NA Mus musculus 50 Ela3 ENSMUSG00000023433 ENSMUST00000102522 1 1 1 161 4 136986416 136986434 TAATCACCCTGAAGCTCAC 58 136981038 136984386 CATACTGAAGGGAGACCTG 58 NA Nonspecific, InUTR Mus musculus 50 Gpr115 ENSMUSG00000023918 ENSMUST00000024711 1 1 1 83 17 42809588 42812684 ACCAAGACAGGGTAAATGTG 59 42809524 42809542 ATTTCTCCACGGAAGTTCC 59 NA Mus musculus 50 2700062C07Rik ENSMUSG00000024273 ENSMUST00000097646 1 1 1 103 18 24629416 24629435 GTATTACATTGAAGCGGCTG 59 24629582 24631465 AAGTGCTGTTATCCTCGTG 59 NA Mus musculus 50 Adamts10 ENSMUSG00000024299 ENSMUST00000097350 3 1 2 183 17 33665763 33667085 TATTCTACAAGCATGGCCT 58 33667232 33668540 TTCCACGGTTTCTCATCTC 59 NA DesignRelaxed Mus musculus 50 Slc29a2 ENSMUSG00000024891 ENSMUST00000025826 1 1 1 83 19 5027374 5027393 ATACTTCATCACACCCTGTG 59 5027438 5027696 TAGTAACGGGCAAACTTCAG 59 NA Mus musculus 50 Rela ENSMUSG00000024927 ENSMUST00000025867 2 1 1 135 19 5638877 5638895 GAACAGTTCGAATCTCCCT 58 5638992 5639867 TTCTGGAAGCTATGGATACTG 58 NA Mus musculus 50 Mark2 ENSMUSG00000024969 ENSMUST00000051711,ENSMUST00000032556,ENSMUST00000032557,ENSMUST00000025921 2 4 4 82 19 7365146 7365164 CTCCTTAAGACCATTGGCA 59 7364849 7365100 TTCACAGCTACCTCTTTCC 58 NA Mus musculus 50 Dnase1l3 ENSMUSG00000025279 ENSMUST00000026315 2 1 1 80 14 8819862 8819882 CTGTTGATGGAAATCAAGGAC 59 8816664 8819820 GCTTCTTCGTGAATTTCCA 58 NA Mus musculus 50 Gpr143 ENSMUSG00000025333 ENSMUST00000026383 3 1 1 81 X 149233151 149242795 GTCTGAAGATTCAGATGCCA 59 149242838 149242857 GGAAATGGAGTCAACTTCCT 59 NA Mus musculus 50 Cyp2e1 ENSMUSG00000025479 ENSMUST00000026552,ENSMUST00000106055 1 2 3 93 7 147959025 147959043 AGATTCATCAACCTCGTCC 59 147959100 147959541 TTACAACTGTACCCTTGGG 58 NA Mus musculus 50 Klhl4 ENSMUSG00000025597 ENSMUST00000040504,ENSMUST00000113371,ENSMUST00000113370 3 3 3 80 X 111636031 111639247 GTATGCTTATACAGGTGTGCT 59 111639289 111639307 GTCAGCTGTAAGAGACAGG 59 NA Mus musculus 50 Col7a1 ENSMUSG00000025650 ENSMUST00000112070,ENSMUST00000026740 3 2 2 81 9 108860265 108860372 CTAACGATCCACAGAGATCC 59 108860414 108860434 CCCTAATTCTTGTTGCATCTG 59 NA Mus musculus 50 Itgb1 ENSMUSG00000025809 ENSMUST00000004192,ENSMUST00000090006 3 2 2 81 8 131248258 131248277 CTGCTGGTTCTATTTCACCT 59 131248321 131249930 AGTAGGACAGTCTGGAGTC 59 NA Mus musculus 50 Pard3 ENSMUSG00000025812 ENSMUST00000026921,ENSMUST00000079777,ENSMUST00000108752 1 3 3 80 8 129895769 129900655 CTTAAGAAAGGTACAGAAGGAC 58 129900696 129900714 GACATAAATGGGAGCTGAG 57 NA Mus musculus 50 Dhtkd1 ENSMUSG00000025815 ENSMUST00000026924,ENSMUST00000095147 1 2 2 80 2 5852028 5853446 CTTCACTACCACAGGACTG 59 5851966 5851987 TAGATATGGTTCAGATAGGCCA 59 NA Mus musculus 50 4833439L19Rik ENSMUSG00000025871 ENSMUST00000026989,ENSMUST00000110014 3 2 2 174 13 54665626 54665886 ATTTCACTGTGGTGGAAGG 59 54663157 54663175 TCATCATAGCTGAATGCCC 59 NA InUTR Mus musculus 50 Alkbh8 ENSMUSG00000025899 ENSMUST00000053407 2 1 1 80 9 3368008 3369671 CAATTGTAGTTACTCCTCAGTC 58 3369711 3369730 AATGCTTCTTTACTGCTCTC 57 NA Mus musculus 50 Pftk2 ENSMUSG00000026023 ENSMUST00000114248 2 1 2 85 1 59387835 59401102 TCCTGATGAGGAGTCTCTG 59 59401151 59401169 GTCTCTTCCTGTAGGAAGC 59 NA Mus musculus 50 Mitd1 ENSMUSG00000026088 ENSMUST00000027257 1 1 1 80 1 37939454 37939473 AGAATACCTACACGAGACAG 58 37938617 37939414 AGGAAGTTATAGAGCTGATGAG 58 NA Mus musculus 50 6330578E17Rik ENSMUSG00000026112 ENSMUST00000027286 2 1 1 110 1 37477465 37485197 AAAGATCAATGCTGGATGC 58 37477373 37477392 TTTCTGTTAAGGACCATGGA 58 NA InUTR Mus musculus 50 Col9a1 ENSMUSG00000026147 ENSMUST00000054588,ENSMUST00000084261,ENSMUST00000088349,ENSMUST00000115252 3 4 4 132 1 24203791 24204144 TAGATGGCATTGATGGTGAC 59 24208853 24208872 CCATCAGGTCCTGTTAATCC 59 NA Mus musculus 50 3110079O15Rik ENSMUSG00000026258 ENSMUST00000027476 3 1 1 209 1 89371691 89371709 AGGAATTTGCTGTCTCTGG 59 89372004 89372023 TTTATTGGCTTCAAGAAGCG 59 NA DesignNoJunction, InUTR Mus musculus 50 Asb1 ENSMUSG00000026311 ENSMUST00000027538,ENSMUST00000086843 1 2 3 80 1 93449003 93451334 TAAAGAGGCCAGAAGTATTCC 59 93451376 93451394 AGTCGGTATTTGCCAAGAG 59 NA Mus musculus 50 Csrp1 ENSMUSG00000026421 ENSMUST00000097561,ENSMUST00000027677 2 2 2 82 1 137636019 137636037 GAAGACGGTCTACTTTGCT 59 137636083 137641847 TCTTGCAGACCATACACAG 59 NA Mus musculus 50 ENSMUSG00000026654 ENSMUSG00000026654 ENSMUST00000054846 1 1 1 60 17 42547268 42547286 TTGTAAACCTCACCAGCTC 59 42547310 42547328 CTCATAAGGAAGCCAAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zbtb43 ENSMUSG00000026788 ENSMUST00000113156 1 1 3 82 2 33317840 33317858 TATTCATCCCAGATAGGGC 57 33310634 33317794 TTGTTTAGTGTGGTTCGAC 57 NA InUTR Mus musculus 50 Fcna ENSMUSG00000026938 ENSMUST00000028307 1 1 1 225 2 25483050 25483269 GATGTTAAGGTCGTAGGTCTG 59 25482176 25482194 CTCCTGTATCGCCTTTCTC 59 NA DesignNoJunction Mus musculus 50 Pkp4 ENSMUSG00000026991 ENSMUST00000102754,ENSMUST00000037903,ENSMUST00000112577 3 3 3 80 2 59180231 59180249 AGAGTTGTCTCTTCTGTGG 58 59180292 59182865 GGCGTATTTACCTATGAGCT 59 NA Mus musculus 50 Depdc7 ENSMUSG00000027173 ENSMUST00000028595 1 1 1 88 2 104563524 104563542 AACAGGGAGGAGTTTAGAC 58 104563311 104563472 CGATTGTCACTTTCTTCCT 57 NA Mus musculus 50 Hsd17b12 ENSMUSG00000027195 ENSMUST00000028619 2 1 1 81 2 93874228 93884042 CATCTTTGTGCAGAGTGTC 58 93874165 93874183 AGAGGGCTTATCCAAAGTC 58 NA Mus musculus 50 Lrp4 ENSMUSG00000027253 ENSMUST00000111341,ENSMUST00000028689 3 2 2 80 2 91326052 91326071 ACGTGTATTGGACAGATGTC 59 91326114 91326257 TATCCACTACCACCTCCTG 59 NA Mus musculus 50 Siglec1 ENSMUSG00000027322 ENSMUST00000028794,ENSMUST00000110227 1 2 3 81 2 130899364 130899653 CTGCAAATTCTCTATGCCC 58 130899301 130899319 ACTGAATCACGACCATGAG 59 NA Mus musculus 50 BC020535 ENSMUSG00000027474 ENSMUST00000028975,ENSMUST00000109800 1 2 2 80 2 152905255 152906650 TTCCTTCTCATTGGAATGC 57 152906694 152906712 GATACCCATACTCTCCAGG 57 NA Mus musculus 50 Snx16 ENSMUSG00000027534 ENSMUST00000099223,ENSMUST00000067626 3 2 3 82 3 10420787 10420806 TGGAATCCCTGAAGAAACTG 59 10419208 10420742 TGGCTTATGATCAGCTCTG 59 NA Mus musculus 50 Cd2 ENSMUSG00000027863 ENSMUST00000029456 1 1 2 138 3 101087061 101087081 AACACTACTCAATAGTCTCCC 58 101083823 101086961 CAGACCTTTCTCTGGACAG 59 NA Mus musculus 50 MGI:1316726 ENSMUSG00000028001 ENSMUST00000029630 1 1 1 87 3 82834177 82834195 CATAGAGAAAGCGCAACAG 58 82834246 82834766 ATCAATATCCACCTCCAGG 58 NA Mus musculus 50 Cd1d1 ENSMUSG00000028076 ENSMUST00000029717 3 1 3 261 3 86802268 86802571 GTCACCTAAAGAAGACTATCCC 59 86802028 86802046 GAGACCACGGACAAATAGG 59 NA DesignRelaxed Mus musculus 50 Hemgn ENSMUSG00000028332 ENSMUST00000071096,ENSMUST00000107764 1 2 2 90 4 46413619 46413638 TTGGAGTCTGAGAAACAGAG 58 46409924 46413566 TTTCTGTTCTCCAAGGAGC 59 NA Mus musculus 50 Pramef12 ENSMUSG00000028591 ENSMUST00000030326 1 1 1 80 4 143985630 143985648 CCTGGATATCTTGCAAACC 58 143985048 143985586 TGCAGTTTGTAATTCCTGG 57 NA Mus musculus 50 Capzb ENSMUSG00000028745 ENSMUST00000102507,ENSMUST00000102508,ENSMUST00000030519,ENSMUST00000116268,ENSMUST00000030518,ENSMUST00000042675 3 6 6 114 4 138836492 138842955 CCAGACAGATGGAGAAAGAC 59 138843693 138843711 TAGATCTCATTCAGCGTGC 59 NA Mus musculus 50 4930555I21Rik ENSMUSG00000028801 ENSMUST00000063707 1 1 1 94 4 135075349 135081344 CATTACAATGCCTCCATCG 58 135081402 135081420 GAGGGTATGAATCCTCTCG 58 NA Mus musculus 50 Stx12 ENSMUSG00000028879 ENSMUST00000030698 3 1 1 80 4 132413293 132414348 AAGGTGATCTGATCGATAGC 59 132413232 132413250 TTTGTAGCTGATCAGTGGC 59 NA Mus musculus 50 Rab28 ENSMUSG00000029128 ENSMUST00000031011 1 1 1 82 5 42089677 42089695 AGTTTGGGATATAGGAGGG 57 42079074 42089631 ATACCAAGAGGATTCCCTG 58 NA Mus musculus 50 Fosl2 ENSMUSG00000029135 ENSMUST00000031017 2 1 1 119 5 32452834 32452852 AGAGAAACAAGCTAGCTGC 59 32455077 32455095 CAGCAATCTCTTTCTGCAG 58 NA DesignNoJunction Mus musculus 50 Klf3 ENSMUSG00000029178 ENSMUST00000031074 2 1 1 90 5 65213516 65213535 TTATGTATACCAGCCACCTG 58 65213588 65214127 ATTACAGGTACTGGCATGC 59 NA Mus musculus 50 Pds5a ENSMUSG00000029202 ENSMUST00000031104 2 1 1 80 5 66045329 66046037 TTCTTGGGCGATTTAATGAC 58 66045268 66045287 GGTGATTCATCAAACAGTGG 59 NA Mus musculus 50 Nsun7 ENSMUSG00000029206 ENSMUST00000031109,ENSMUST00000065530,ENSMUST00000113720 2 3 3 83 5 66655849 66667762 CCTTCTAAACGGCTTTAAGAC 58 66667806 66667825 ATATGGTAAATCGAGAGGGC 59 NA Mus musculus 50 Acad10 ENSMUSG00000029456 ENSMUST00000031412,ENSMUST00000111770 2 2 2 86 5 122082663 122084695 ATTCTGAGAGGGTTCAGAG 57 122082595 122082616 CATGTTAAGACAGTACATCCTG 58 NA Mus musculus 50 Csda ENSMUSG00000030189 ENSMUST00000111988,ENSMUST00000032309,ENSMUST00000087865,ENSMUST00000081659 2 4 4 172 6 131318450 131318468 GTCCCTACAACTATAGGCG 58 131315410 131317787 ATTCTTTAGGTCACCCTGC 59 NA Mus musculus 50 Dyrk4 ENSMUSG00000030345 ENSMUST00000112234,ENSMUST00000078521,ENSMUST00000032495 3 3 3 84 6 126841700 126841718 AATGTGGTCCACATGAAGG 59 126840164 126841653 ACTCATACAGGTTGATTCCC 59 NA Mus musculus 50 Cyp2b10 ENSMUSG00000030483 ENSMUST00000005477,ENSMUST00000072438 2 2 2 81 7 26702073 26702093 TTATACCTATTGGAGTGCCAC 59 26702136 26702320 TACACCTCAGTGTTCTTGG 58 NA Mus musculus 50 Prmt3 ENSMUSG00000030505 ENSMUST00000107607,ENSMUST00000085271,ENSMUST00000032715 1 3 3 117 7 57035708 57035726 CACACTGTAAGTTGGAGCA 59 57036533 57037325 TCAACCGTAGGATTCTTAAGTC 59 NA Mus musculus 50 Rasgrp4 ENSMUSG00000030589 ENSMUST00000094617,ENSMUST00000032810 1 2 2 127 7 29923933 29924077 TTCATATCCTAAGGCTGCC 58 29925304 29925322 TTATGACTGCTTCCAGCTG 59 NA Mus musculus 50 Pak4 ENSMUSG00000030602 ENSMUST00000108283,ENSMUST00000032823 3 2 2 171 7 29347568 29347586 GACTCTATCTTGCTGACCC 59 29345283 29345820 GTGACCAGATATCCACCTC 58 NA Mus musculus 50 Det1 ENSMUSG00000030610 ENSMUST00000032839 3 1 1 97 7 85979067 85979086 CCCATACCTGGATTTGTCTC 59 85972991 85979007 CATAGAACCTGATCGGGTG 59 NA DesignNoJunction Mus musculus 50 Slco2b1 ENSMUSG00000030737 ENSMUST00000032985,ENSMUST00000107088,ENSMUST00000107086 3 3 3 81 7 106834072 106834401 CTACATTGGGATCTTGTTTGG 58 106834011 106834029 ATAAAGGCGTAGCATGAGG 59 NA Mus musculus 50 Fgf21 ENSMUSG00000030827 ENSMUST00000033099 2 1 1 178 7 52870332 52870449 CAGTCCAGAAAGTCTCCTG 59 52869617 52869635 ACACATTGTAACCGTCCTC 59 NA DesignNoJunction Mus musculus 50 Trim30 ENSMUSG00000030921 ENSMUST00000076922 2 1 1 81 7 111560749 111560767 AAGCTCCAGATCTGAAAGG 58 111560168 111560437 TGTAGAGTCATATGAACCCAG 58 NA Mus musculus 50 Pqbp1 ENSMUSG00000031157 ENSMUST00000033497,ENSMUST00000115655,ENSMUST00000115654 1 3 3 88 X 7472998 7473126 TAATGCAGATGCTGAGGAC 59 7472928 7472946 CTGGCTTCTCATGACTACG 59 NA Mus musculus 50 Ophn1 ENSMUSG00000031214 ENSMUST00000033560,ENSMUST00000113817,ENSMUST00000113815,ENSMUST00000113826 1 4 4 85 X 95897226 95897245 AATAGAAGGCTATGGATGGA 57 95893679 95894203 TTCAGCTCCATTTCTTCCT 58 NA Mus musculus 50 D630029K05Rik ENSMUSG00000031294 ENSMUST00000033651 1 1 1 70 10 116403704 116404294 GAAACTGCACAAGGAAAGC 59 116404328 116404346 ATAATCAGGCAGCTTCCAC 59 NA DesignNoJunction, InUTR Mus musculus 50 Bgn ENSMUSG00000031375 ENSMUST00000116585,ENSMUST00000033741 2 2 2 84 X 70737487 70738067 CATGAACTGCATTGAGATGG 59 70738114 70738132 GTAATTGAGCTTCAGGCCA 59 NA Mus musculus 50 Dkc1 ENSMUSG00000031403 ENSMUST00000033776 3 1 1 80 X 72347893 72349686 AAAGATAGTGCAGTGAATGC 58 72349727 72349747 CTCAATGCCATCTTCATATCG 58 NA Mus musculus 50 Tmem38a ENSMUSG00000031791 ENSMUST00000034244 3 1 1 104 8 75103524 75103542 TTTGGGAGTTACATCCTGG 58 75103609 75103868 AATCAAGTACCACACTCCAG 59 NA Mus musculus 50 1110019N10Rik ENSMUSG00000031879 ENSMUST00000093234 1 1 1 97 8 107164892 107164910 CATCAAAGTCAAGCTGCTG 59 107163978 107164429 GTTTGTTCACTGCATGCTC 59 NA Mus musculus 50 Nip7 ENSMUSG00000031917 ENSMUST00000034392 1 1 1 80 8 109581242 109581260 GAAGTTTACCAAGACCCAC 57 109581301 109581957 CACACTTTATACTTGGCATAGG 58 NA Mus musculus 50 Ankrd49 ENSMUSG00000031931 ENSMUST00000034406 3 1 1 63 9 14587077 14587096 CAAGCAAATTGCTTCTTTGG 58 14586030 14586048 GAGAGTAGTCTCTGCACTG 58 NA DesignNoJunction Mus musculus 50 Med17 ENSMUSG00000031935 ENSMUST00000034411 3 1 1 83 9 15080506 15082015 CTTCCTCCCAAACAGAGTC 59 15080441 15080460 CTTCAGTAGGATCTGAGCTG 59 NA Mus musculus 50 Kars ENSMUSG00000031948 ENSMUST00000034426,ENSMUST00000093120 2 2 2 80 8 114524080 114525394 GCTTCCTAGAGATCGAAACTC 59 114524020 114524041 CATTGTGATAGGTGATGAAAGG 59 NA Mus musculus 50 Nnmt ENSMUSG00000032271 ENSMUST00000034808 3 1 1 94 9 48411519 48411537 AGAAATGGCTGAAGAAGGA 58 48400452 48411461 CTCAGGTCCCTTCATTCTG 59 NA Mus musculus 50 Pdxk ENSMUSG00000032788 ENSMUST00000041616 1 1 1 85 10 77914279 77914297 GTCCCAGGAACTTCATGAG 59 77913100 77914230 CTCTCGTGTAACCAGTGAG 59 NA Nonspecific Mus musculus 50 Dnahc8 ENSMUSG00000033826 ENSMUST00000035963 3 1 1 80 17 30916108 30916675 GAGTCGTTAAAGCTGATGAG 58 30916718 30916736 AGTTTCCTCGTTGATTGTG 57 NA Mus musculus 50 Atp2c2 ENSMUSG00000034112 ENSMUST00000095171 3 1 2 80 8 122245182 122248928 CTGGATCAGTTCAGGAACC 59 122248969 122248990 ATCCTCATATTCTTTGGTGAGG 59 NA Mus musculus 50 Lrrc58 ENSMUSG00000034158 ENSMUST00000078717 2 1 1 107 16 37878574 37878592 CACTCCCTATGACCTTCCT 59 37881351 37881370 ATTTGTCTGACACAACAGTC 58 NA DesignNoJunction Mus musculus 50 Barhl2 ENSMUSG00000034384 ENSMUST00000045578,ENSMUST00000086795 3 2 2 114 5 106882680 106884478 AGAACCGAAGAACCAAGTG 59 106882584 106882603 GGGTGATAGAAATAAGGCGA 59 NA Mus musculus 50 Cybasc3 ENSMUSG00000034445 ENSMUST00000099695,ENSMUST00000099694 3 2 2 179 19 10653494 10653512 GGTATTTGGTCCCTTGGAG 59 10655040 10656796 CAATAACACCTTTAGACTCAGC 59 NA InUTR Mus musculus 50 Mrpl34 ENSMUSG00000034880 ENSMUST00000048914 2 1 1 72 8 73988899 73988917 GATATGGCTTTCCTAGCCC 59 73988952 73989153 GATACCTGCCACTCAATAGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Cebpa ENSMUSG00000034957 ENSMUST00000042985 1 1 1 62 7 35905341 35905359 GATAAAGCCAAACAACGCA 59 35905385 35905403 ATTGTCACTGGTCAACTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ggta1 ENSMUSG00000035778 ENSMUST00000044232,ENSMUST00000079424,ENSMUST00000102794,ENSMUST00000113002,ENSMUST00000113001,ENSMUST00000113000,ENSMUST00000044255,ENSMUST00000091012 2 8 8 82 2 35263597 35268858 GGTTCAATCCAAAGAACCG 59 35263533 35263551 TGTGTCATAAGTGCCTTCC 59 NA Mus musculus 50 Psenen ENSMUSG00000036835 ENSMUST00000043898 3 1 1 81 7 31347145 31347353 AATCAAAGGCTATGTTTGGC 59 31347083 31347101 CTGGAAGATGGTGATCCAG 59 NA Nonspecific Mus musculus 50 Dchs1 ENSMUSG00000036862 ENSMUST00000078482 1 1 1 60 7 112904960 112904980 ATATCTTACCATCTGGCTTCC 59 112904578 112904938 GAGTTCCATTGTTAGGGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cst11 ENSMUSG00000036958 ENSMUST00000028934 3 1 1 139 2 148596216 148596922 TTATGAAGCAGGTGACAGG 59 148594509 148594527 CACTGAGAAGTAGCACTGG 59 NA DesignNoJunction Mus musculus 50 Anapc10 ENSMUSG00000036977 ENSMUST00000048147 1 1 1 67 8 82253100 82253119 AAATCTCAGTCAGAGTAGGA 57 82253149 82298848 TTCCACCAATTCAAGTTGC 58 NA DesignNoJunction Mus musculus 50 Zfp39 ENSMUSG00000037001 ENSMUST00000102703 1 1 2 80 11 58706511 58706529 TCTTTAAGCTGGAGCAAGG 59 58705034 58706470 TTATCTTCTGTACATCTGCTCG 59 NA Nonspecific Mus musculus 50 Zscan21 ENSMUSG00000037017 ENSMUST00000110961,ENSMUST00000110960,ENSMUST00000080732,ENSMUST00000062350,ENSMUST00000110959 3 5 5 163 5 138566772 138566790 CTAGAGCTACTGGTTCTGG 58 138566917 138567698 TTTGGAGGAGATGAGACCT 59 NA DesignNoJunction Mus musculus 50 Myom3 ENSMUSG00000037139 ENSMUST00000105854,ENSMUST00000074336 1 2 2 80 4 135368400 135370075 ATCATGGAAGATAAGACCCT 57 135370118 135370136 GTCGTTCTTTAGCCAAGAG 58 NA Mus musculus 50 AY223547 ENSMUSG00000037236 ENSMUST00000041514 3 1 1 85 18 35742429 35742447 GAAGGCACTTTGGTTTCAG 59 35742496 35743544 CTCTGTTAGGAATCCGCAG 59 NA Mus musculus 50 Lsm1 ENSMUSG00000037296 ENSMUST00000038421 3 1 1 81 8 26904251 26912406 TACTAGGAGAAATAGACCTGG 57 26912448 26912467 CTCTGTTCCTCTAGGATCTC 58 NA Mus musculus 50 Hhat ENSMUSG00000037375 ENSMUST00000110841 1 1 4 173 1 194481480 194485349 TTTCTTAATCAGGCCTCCC 58 194481325 194481343 ATGGAGCTCATTGCTATCC 59 NA Mus musculus 50 Best1 ENSMUSG00000037418 ENSMUST00000041773 3 1 1 82 19 10066201 10066561 CAGAGCCTGATGAATGAGG 59 10066137 10066157 ACCAATGGGATACTTATCCAG 58 NA Mus musculus 50 Atp8a1 ENSMUSG00000037685 ENSMUST00000037380,ENSMUST00000072971,ENSMUST00000113656,ENSMUST00000113652,ENSMUST00000113651 2 5 5 80 5 68204374 68204394 GTTCCTCTATTCTCAGTTCCG 59 68203409 68204333 GACACATCAGGAATTTGCTG 59 NA Mus musculus 50 Mrps26 ENSMUSG00000037740 ENSMUST00000046149 3 1 1 69 2 130389669 130389687 AATTCTTCGTGTTGACCGA 59 130389720 130389828 GTGAACTCTAGCCTGAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Npy6r ENSMUSG00000038071 ENSMUST00000042747 3 1 1 60 18 44435628 44435647 GGATCATCTTGATTTGGCTC 58 44435670 44435688 TGGTAGGACAGGAATAAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Smg6 ENSMUSG00000038290 ENSMUST00000045281,ENSMUST00000053096 1 2 3 60 11 74803601 74803619 AGGTCCTTAAGGAGTTCCA 59 74803643 74803661 CGGGTACTTCCAATAGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Snx10 ENSMUSG00000038301 ENSMUST00000049152,ENSMUST00000114439 1 2 2 80 6 51512056 51525912 AGAAAGAGGAGTTCGTGAG 58 51525953 51525974 CATAGTCGATATAAGAGTGCCA 59 NA Mus musculus 50 Gpr162 ENSMUSG00000038390 ENSMUST00000046893 3 1 1 108 6 124809228 124809517 ACTTACAGGTCCCTTTGTC 58 124809138 124809156 ATATCATCCGATGAGGACC 57 NA Mus musculus 50 Atp5j2 ENSMUSG00000038690 ENSMUST00000037056 1 1 1 93 5 145948056 145948074 AGTCAAACTTGGAGAGCTG 59 145945504 145947999 ATACCGGTCATACCCTCTC 59 NA Nonspecific Mus musculus 50 Siglec5 ENSMUSG00000039013 ENSMUST00000012798,ENSMUST00000085470 3 2 2 82 7 50607309 50607329 GTACTTCTTCAGATTGGATGG 58 50607373 50607549 CCTCAGTCAGAGCTATCAC 58 NA Mus musculus 50 Edaradd ENSMUSG00000039309 ENSMUST00000041383 1 1 1 88 13 12599584 12600649 TTATCCTTTGCCATGTCAG 57 12592843 12592861 GGACAGTTGGAATTGACTG 58 NA Mus musculus 50 Edaradd ENSMUSG00000039309 ENSMUST00000041383 2 1 1 89 13 12599584 12600650 TTTATCCTTTGCCATGTCAG 58 12592843 12592861 GGACAGTTGGAATTGACTG 58 NA Mus musculus 50 Prpf18 ENSMUSG00000039449 ENSMUST00000035721 2 1 1 80 2 4566714 4569300 GATGTGGCTACAAGATACAG 57 4566653 4566671 CTAGTTCAAGTTCCAGCAC 58 NA Mus musculus 50 C330006K01Rik ENSMUSG00000039623 ENSMUST00000038699,ENSMUST00000110792 3 2 2 199 5 142948327 142949868 AGTCTGTTCAAGTTCCTGG 59 142950354 142950372 AGGGAGATATCCCAAAGCA 59 NA Mus musculus 50 Gpr34 ENSMUSG00000040229 ENSMUST00000041708 2 1 2 173 X 13209997 13210623 AGCTTCAACTCAGTTCCTG 59 13216341 13216362 CATTGTTACAGTGTGACTTCTC 59 NA InUTR Mus musculus 50 Apoc1 ENSMUSG00000040564 ENSMUST00000045035 3 1 2 92 7 20277781 20277799 CTTCCTGTCCTGATTGTGG 59 20277332 20277350 TATGCTCTCCAATGTTCCG 59 NA DesignNoJunction Mus musculus 50 Rnasek ENSMUSG00000040904 ENSMUST00000040428 1 1 1 103 11 70052504 70053163 ATGTTGATAATGCTCGGGA 58 70051952 70051970 TATATGTTCTGAGGACCGT 57 NA DesignNoJunction Mus musculus 50 Pnliprp1 ENSMUSG00000042179 ENSMUST00000048644 1 1 1 80 19 58805022 58805040 AAGACTCGGTTCATCATCC 59 58805084 58806525 TTGGAACATGTTCTTGCAC 58 NA Mus musculus 50 Osbpl6 ENSMUSG00000042359 ENSMUST00000111929,ENSMUST00000077972,ENSMUST00000090784,ENSMUST00000111930,ENSMUST00000063499 2 5 5 80 2 76417296 76417314 ATGTCAGAATCCGTGTCAG 59 76417357 76422526 ATCAGAAGCCTCATTCTCTG 59 NA Mus musculus 50 4933432B09Rik ENSMUSG00000042564 ENSMUST00000109648,ENSMUST00000109646,ENSMUST00000046816 3 3 3 93 15 79472606 79472624 AATAAACTGCCCAATGGTG 58 79471163 79472549 CTGAACAGTAAGACTTGCC 58 NA Mus musculus 50 Rfesd ENSMUSG00000043190 ENSMUST00000050997 1 1 1 80 13 76145460 76145572 CATTCGCTGTTACCATTCTG 59 76140505 76140526 GGGCAAACTATACATGATTGTC 59 NA Mus musculus 50 A030009H04Rik ENSMUSG00000043419 ENSMUST00000052108 2 1 1 147 11 69154557 69154675 AATGTGCTCTACTGTCCAG 58 69154785 69154804 GGTAGTCTTGACATCAACCT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Pcdhb12 ENSMUSG00000043458 ENSMUST00000055495 1 1 1 60 18 37596946 37596965 CCATCAATTCAGACAATGGG 58 37596988 37597006 TGAAGCATCTCATAGTCCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Klhl15 ENSMUSG00000043929 ENSMUST00000096369,ENSMUST00000113911,ENSMUST00000113915 1 3 5 91 X 91487327 91497765 GTTCATTTGTGATTCATGGC 57 91497819 91497837 TCATACAGTGCTCTGAACC 58 NA InUTR Mus musculus 50 Thrap3 ENSMUSG00000043962 ENSMUST00000080919,ENSMUST00000106142 2 2 3 102 4 125858048 125863686 AGGCTGAGTTCTAGGTCTC 59 125857964 125857984 TGTTATGACCTCGGAAATCTC 59 NA Mus musculus 50 Fmn1 ENSMUSG00000044042 ENSMUST00000110955,ENSMUST00000110954 3 2 6 161 2 113205841 113205859 ATCTACTACGAAGGTCACG 58 113205984 113319074 ATAGCAGCCTGGTATTCTG 58 NA Nonspecific Mus musculus 50 A830010M20Rik ENSMUSG00000044060 ENSMUST00000100951,ENSMUST00000112671 1 2 4 60 5 107939769 107939787 GCTAGTGTTTCTTCCACAG 58 107939810 107939829 TTTCCAATTCCAGGATTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lmod3 ENSMUSG00000044086 ENSMUST00000095655 2 1 1 191 6 97197328 97197346 AGAATTCAGCGCAAATCTC 58 97188857 97197173 CAGTTGCACAGGTTTAAGG 58 NA Mus musculus 50 Bcl2l15 ENSMUSG00000044165 ENSMUST00000062945,ENSMUST00000106820 1 2 2 80 3 103637336 103637355 ATCAGTTCAATGGAGAGCTG 59 103637398 103639981 GTACAGTACTTCCTGCCTG 59 NA Nonspecific Mus musculus 50 Zbtb39 ENSMUSG00000044617 ENSMUST00000054287 2 1 1 60 10 127178783 127178803 AACCTCTTCTTAAACACTGGG 59 127178825 127178843 GGGTAATGAAGTCCACCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700001G17Rik ENSMUSG00000044744 ENSMUST00000051203 3 1 1 189 1 33727049 33727067 AGAGTCAGGGTAACTGAGG 59 33727220 33727238 CGACGTCATTCTTACAGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hjurp ENSMUSG00000044783 ENSMUST00000065420 3 1 3 148 1 90173853 90173960 CTGATAGCGAAGTACAACCA 59 90164588 90171621 CTCTTCTCTGCGTTCTGAG 59 NA Mus musculus 50 E130308A19Rik ENSMUSG00000045071 ENSMUST00000052420 3 1 2 103 4 59704121 59704140 TTAACACAGAGCCTGAAGTG 59 59704206 59732526 TCTTTCATCCTGGTCTGGA 59 NA Mus musculus 50 Pxt1 ENSMUSG00000045378 ENSMUST00000051526 3 1 1 124 17 29078190 29078209 TCAATCACAGGGTGATTCAG 59 29071650 29071668 CAGCAAATGGTTGTTCCAG 59 NA DesignNoJunction Mus musculus 50 1190002N15Rik ENSMUSG00000045414 ENSMUST00000061904 3 1 2 126 9 94420849 94420867 GTGAAATTGCCAAAGATGG 57 94420739 94420759 TCACATTGTGACTTCTGTG 57 NA Mus musculus 50 EG330552 ENSMUSG00000045813 ENSMUST00000054860 2 1 1 80 7 69259581 69259599 AGAGTCAGAGGAGGATACC 59 69257081 69259538 AATCCTCAGGATGTTAAGCA 58 NA InUTR Mus musculus 50 Mtmr11 ENSMUSG00000045934 ENSMUST00000054356 1 1 1 80 3 95968479 95968716 ATGTAGCTACCAGTCTTTCAG 59 95968757 95968776 AATGTGCAAATGCTCTTCTG 59 NA Mus musculus 50 Usp27x ENSMUSG00000046269 ENSMUST00000066557,ENSMUST00000115744 1 2 2 60 X 6950784 6950802 GATGATGCCGTAATCACCA 59 6950742 6950762 GTAAATACCCTTCACTGTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr1 ENSMUSG00000046856 ENSMUST00000050536 2 1 1 137 1 63256428 63256446 GTTTGAGGCTAGAAAGGGT 59 63230660 63256330 AGGTGAAGAGTAAGGAAATCTG 59 NA InUTR Mus musculus 50 1600012P17Rik ENSMUSG00000047661 ENSMUST00000062159 3 1 1 134 1 160909853 160909872 AAACATTGCTTTGGTTGGAG 59 160899926 160899944 AGATCTTCAACAAGGACCT 57 NA DesignNoJunction, InUTR Mus musculus 50 Ccdc37 ENSMUSG00000048794 ENSMUST00000062750 1 1 1 80 6 90362380 90362851 TTCGGTGACAAAGGATCTG 59 90362242 90362261 CTTTGTGACCTTCTTCAAGC 59 NA Mus musculus 50 Ppm2c ENSMUSG00000049225 ENSMUST00000108299,ENSMUST00000095144 2 2 6 104 4 11889370 11892768 ACGAATTGGAATCCCAGTC 59 11889284 11889302 CTCAGTTCACAGTTACGGA 58 NA Mus musculus 50 1810010M01Rik ENSMUSG00000049350 ENSMUST00000051122 1 1 1 113 7 134194104 134195151 TACATAGTAGGTCTCCAGGTG 59 134194011 134194029 CACCTGGATCACAGATTCC 59 NA Mus musculus 50 Zfp644 ENSMUSG00000049606 ENSMUST00000112696,ENSMUST00000045466,ENSMUST00000112698,ENSMUST00000086790,ENSMUST00000112695,ENSMUST00000112694 2 6 6 60 5 107047447 107048576 TTACATTCTCCGATGCAGG 59 107047405 107047423 TTCCTGAACAGACAATGGT 58 NA DesignNoJunction Mus musculus 50 Spatc1 ENSMUSG00000049653 ENSMUST00000074173 2 1 1 100 15 76114626 76115135 CCTCCAAAGTCAATGATACC 57 76115198 76115216 CTTGTTAGACTTTCGGTGG 58 NA Mus musculus 50 Hoxc12 ENSMUSG00000050328 ENSMUST00000055562 3 1 1 61 15 102768802 102768820 GTCAACGAGTTCATCACAC 58 102768844 102768863 TCACTAAGATTCAAGCGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxl22 ENSMUSG00000050503 ENSMUST00000056890 2 1 1 73 9 66362242 66362260 GAGATGTGTTTGAGGACCC 59 66362187 66362206 GTTGTCTTTCTTGAGCTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 A130092J06Rik ENSMUSG00000050592 ENSMUST00000056406 3 1 1 60 2 31938342 31938360 TGTATTCAGAGCATCGGAG 58 31938300 31938318 CATCAATCACGGTAATCCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 4930562D19Rik ENSMUSG00000051427 ENSMUST00000093381,ENSMUST00000101626 2 2 2 91 11 4044645 4046247 CCAGATCCAAAGCTCTAGC 59 4044572 4044590 TGTTCTCCTCCTGTAGGAC 59 NA Mus musculus 50 Olfr414 ENSMUSG00000051509 ENSMUST00000053178 1 1 1 60 1 176361389 176361408 CTCTACACTGTCATTGTCCC 59 176361431 176361449 CCTCCTTGTTTCTCAAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pcdhb6 ENSMUSG00000051678 ENSMUST00000061717 1 1 1 60 18 37494358 37494377 CCACTGTTCGAATTGAAGTC 59 37494400 37494418 AGTGACTGTACAAATTCGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 4930564D02Rik ENSMUSG00000051788 ENSMUST00000070584 2 1 1 81 3 104871227 104871247 AGATGCACCATCAGATAACAG 59 104871288 104880563 TGATTTCTGATTTCCTGGGAG 59 NA InUTR Mus musculus 50 Gpr17 ENSMUSG00000052229 ENSMUST00000064016 3 1 1 63 18 32107372 32107390 CTTCTCTGGGAATCACTGG 59 32107327 32107345 ATAGAAGAGGAAGCCAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000012358 ENSMUSG00000052248 ENSMUST00000064026 3 1 1 288 2 44967834 44967853 TCTAAGAGAAGGACTTGCTC 58 44968709 44968727 AGAGAAACTTGGCGATCAC 59 NA DesignNoJunction, InUTR Mus musculus 50 Atf7 ENSMUSG00000052414 ENSMUST00000064254,ENSMUST00000108828 2 2 2 80 15 102381886 102381904 CACTTCATCCAACTCTTCC 57 102378293 102381843 CAGTAGGAGATCCTATTTGC 57 NA Mus musculus 50 Asna1 ENSMUSG00000052456 ENSMUST00000064314 3 1 1 91 8 87548140 87548159 CTCACAACATCTCAGATGCT 59 87543799 87548089 GTCTATCTCCATAGCAAAGAGG 59 NA Mus musculus 50 ENSMUSG00000052769 ENSMUSG00000052769 ENSMUST00000064809 1 1 1 252 3 115418190 115418208 GTAGAGGAGCTTTCTGGTC 59 115418424 115418442 AAGTTTCAAGGCTTCACCA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ostb ENSMUSG00000053862 ENSMUST00000065894 3 1 1 98 9 65261801 65261819 GCTCCTTGGAATTATTCCA 57 65260799 65261739 CTTTCGATTTCTGTTTGCC 57 NA Mus musculus 50 A130066N16Rik ENSMUSG00000053889 ENSMUST00000066604 3 1 1 75 9 34729290 34730462 GACATCTATCACGAGTGGG 59 34729233 34729253 GGATACTCCAATTCAATCCCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Tmem62 ENSMUSG00000054484 ENSMUST00000067582,ENSMUST00000110686 1 2 2 80 2 120824825 120824843 GTGTTGATTGTGCTGATCC 59 120824887 120828243 TCCCAGAGGTTCTTTAAGC 58 NA Mus musculus 50 Ugt1a1 ENSMUSG00000054545 ENSMUST00000113142 3 1 11 286 1 89952857 89952875 CAACATGGTCTTTGTTGGT 58 90112451 90112724 TCTTTGGATGACCAAGCAG 59 NA DesignRelaxed Mus musculus 50 Cd47 ENSMUSG00000055447 ENSMUST00000084838 1 1 2 81 16 49869182 49884285 GTTGCAAATTAGTTTCGTGG 58 49884329 49884347 CAGAACAGGAGTATAGCCA 58 NA Nonspecific Mus musculus 50 Olfr305 ENSMUSG00000055571 ENSMUST00000069236 1 1 1 60 7 93512588 93512609 CTTTGTCAATAGCCTTATGCAC 59 93512549 93512567 TACCTGAAATGCACATCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ces6 ENSMUSG00000055730 ENSMUST00000034346 3 1 1 81 8 107264169 107264671 ACATGAATTTGGACCTCAC 57 107264716 107264734 CCATTTCTTGCGAAATTGG 57 NA Mus musculus 50 E130018O15Rik ENSMUSG00000055944 ENSMUST00000069741 2 1 1 60 5 35725240 35725258 TAAATTTGGGTTCCAGCTC 57 35725198 35725218 AGAGTAGATGACATGTTTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG432945 ENSMUSG00000056332 ENSMUST00000070382 3 1 1 96 15 40344152 40357774 CCTACCAAGATGACTCCTC 58 40344074 40344093 GAGATAAATTGGGTCCAGGA 58 NA Mus musculus 50 Higd1c ENSMUSG00000056487 ENSMUST00000088142 3 1 3 91 15 100191825 100191843 ATGGGTACAGTATGTAGGG 57 100191898 100191916 TTGACCAGAAGAATCCCTC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 ENSMUSG00000056739 ENSMUSG00000056739 ENSMUST00000071072 2 1 1 60 19 58372970 58372989 TCTTCAGAATTTCTGAGCCT 58 58373012 58373030 TAGGGTAGCAATGGAAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 6330417G02Rik ENSMUSG00000056856 ENSMUST00000106111,ENSMUST00000068273 2 2 2 99 7 146211904 146212463 AACATAGAAATGAGGCAGAG 57 146212525 146212543 GCTTTAGGAAGTCGATCTC 57 NA Mus musculus 50 Glipr1 ENSMUSG00000056888 ENSMUST00000074805 2 1 1 83 10 111430550 111430571 GCCTGGTATGAAGAAATTAAGC 59 111425933 111430509 CCAAACAACCTGAGTATAATGG 59 NA Mus musculus 50 4921509E07Rik ENSMUSG00000056987 ENSMUST00000116417 3 1 1 128 12 79820502 79820520 CAGACTACTCAGACTCCTG 58 79820612 79835167 AGTTCACCATCTGGATTCC 58 NA InUTR Mus musculus 50 Tas2r123 ENSMUSG00000057381 ENSMUST00000071696 1 1 1 60 6 132797309 132797328 TCAGATTCTCACTGCTTTGG 59 132797349 132797369 GCAAATCAGCATAGACAAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lce1a1 ENSMUSG00000057609 ENSMUST00000074142 1 1 1 174 3 92451110 92452196 TGTGTACCTGGAATCTTGC 59 92450954 92450972 CTACAGCAGGAAGACACAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Mmel1 ENSMUSG00000058183 ENSMUST00000080559,ENSMUST00000079269,ENSMUST00000105635,ENSMUST00000105634 3 4 4 84 4 154266061 154266079 TATACGGGAACAGATTGGC 59 154266124 154266533 GAAAGTCAAACTGGAGTATTCC 58 NA Mus musculus 50 4933403O03Rik ENSMUSG00000058537 ENSMUST00000075305 1 1 1 60 10 57685782 57685800 GAAACATGGGAGCAAATGG 59 57685740 57685761 TCTGATATTCTTCTGGAGTGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Olfr1462 ENSMUSG00000058800 ENSMUST00000076832 1 1 1 60 19 13265980 13265999 GTTCTACTCCATTGTCATCC 57 13266022 13266040 CTCCTTATTCCTCATGCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cfi ENSMUSG00000058952 ENSMUST00000077918 2 1 1 81 3 129551682 129551700 GTCACCAGAAGAGTTTCGA 59 129551744 129553621 TTAAACTTTCCTTCAGCTGC 58 NA Mus musculus 50 Ddn ENSMUSG00000059213 ENSMUST00000075444 2 1 1 75 15 98636270 98636288 GAGTCTTAAACCAACCGAG 57 98636213 98636231 TCCTCCAATGAAGAATCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr802 ENSMUSG00000059414 ENSMUST00000074713 1 1 1 60 10 129119004 129119024 ACATTAAACCCTCAGCTACAG 59 129118964 129118984 GTATTTAGTATGGCAACTCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr700 ENSMUSG00000059522 ENSMUST00000079936 1 1 1 60 7 113949348 113949368 GGTGTGATCTTCTTACTTCTC 57 113949308 113949328 GCAGGATTAGTGTATAAGAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1393 ENSMUSG00000059864 ENSMUST00000078932 3 1 1 61 11 49094041 49094061 GCACTATACTACCATCATGCA 59 49094084 49094102 CTACCCAGGAAGCAATAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Serpinb12 ENSMUSG00000059956 ENSMUST00000081277,ENSMUST00000112724,ENSMUST00000078313 2 3 3 80 1 108845766 108845784 TGAAAGCAAAGCTTCTGAC 58 108845828 108846152 TTTGTAGATTCACCCTGCT 58 NA Mus musculus 50 3110018I06Rik ENSMUSG00000060375 ENSMUST00000082269 3 1 1 78 12 108727107 108727125 TCATCTCTTCTGTGTCTGC 58 108727167 108727185 GCAAACGAGTGAAGAAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tnfrsf19 ENSMUSG00000060548 ENSMUST00000111236,ENSMUST00000111234,ENSMUST00000077444 2 3 3 102 14 61624084 61643017 GAGTTGTCCAAGGAATGTG 58 61624000 61624018 GCTTACACTTCTGGAAACC 58 NA Mus musculus 50 Olfr1418 ENSMUSG00000060556 ENSMUST00000079875 3 1 1 60 19 11929531 11929549 TCAAGGATGCTTTGAGGAG 59 11929489 11929507 AGTGCTTCTTGTGTTTGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tssk5 ENSMUSG00000060794 ENSMUST00000071119 2 1 1 138 15 76204174 76204192 CATATCAACGCAGTGTCAG 58 76203977 76204073 TTTCACATTTCAAGTCCCTG 58 NA Mus musculus 50 Exosc5 ENSMUSG00000061286 ENSMUST00000079634 3 1 1 71 7 26451346 26452721 CTATTCTGACGCTGAGCTC 59 26452755 26452774 TAGAATCGGAAGATGTGCTG 59 NA DesignNoJunction Mus musculus 50 Nol10 ENSMUSG00000061458 ENSMUST00000046011 1 1 1 80 12 17411789 17411808 TCATTGGATCACCTTTCCTC 59 17411850 17412051 CCATCAATTTCACCTTGTGG 59 NA Mus musculus 50 Tbpl2 ENSMUSG00000061809 ENSMUST00000080453 3 1 1 85 2 23931610 23942654 TTCAGTAGCAGTTATGAACC 57 23931544 23931563 GATGCAAAGATTAGCAACAC 57 NA Mus musculus 50 Hmgb1l ENSMUSG00000062477 ENSMUST00000082150 2 1 1 65 6 131558396 131558414 ATATTGCTGCCTACAGAGC 59 131558349 131558367 TTTCAGCGTTGATTACCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kif1b ENSMUSG00000063077 ENSMUST00000060537,ENSMUST00000055647,ENSMUST00000105694,ENSMUST00000030806 1 4 4 80 4 148632029 148632048 ATCTGTGACCAGTATTCAGG 58 148627850 148631986 TTCTCTGACTCCTTCAGAC 57 NA Mus musculus 50 Numbl ENSMUSG00000063160 ENSMUST00000079258 1 1 1 92 7 28051806 28053801 GATGACAAGACCAAGGACC 59 28053857 28053875 GTAGGAGAAAGCCTTGTCC 59 NA Mus musculus 50 EG434674 ENSMUSG00000063590 ENSMUST00000065651 3 1 1 105 19 8139010 8139031 CGTATTATTGTGGTCACATTGG 59 8137970 8138945 TACCTGTTGCCCTTAATGTG 59 NA Mus musculus 50 BC068157 ENSMUSG00000064125 ENSMUST00000070717 1 1 1 98 8 4215244 4215262 CAGAAGAGACTCCAACCTC 58 4215080 4215182 AACTCTTCGTGTTCCAGAG 59 NA DesignNoJunction Mus musculus 50 MGI:99543 ENSMUSG00000064334 ENSMUST00000075388 2 1 1 60 X 27900628 27900958 ATTGGACCTTATGGAAGTACAG 59 27900589 27900607 TTCAGGATTTGCATTCCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000067736 ENSMUSG00000065947 ENSMUST00000084013 1 1 1 60 MT 9933 9952 ACTTATATTTCGCTCTCACC 57 9973 9993 GGATAATACTATGCCTTCCAG 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Rad54b ENSMUSG00000066307 ENSMUST00000095145 2 1 1 64 4 11507252 11510839 GAGTGCAAACTTGGATGAG 58 11510867 11510885 GGTGATCCACCATTACCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rpl35a ENSMUSG00000067558 ENSMUST00000087889 3 1 1 173 5 33418848 33418867 AAACAATACGGTGACTCCTG 59 33419003 33419021 GTTTAAATCCGGGATGGGT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 V1ra6 ENSMUSG00000068232 ENSMUST00000089419 1 1 1 60 6 89795082 89795101 TGTTAATTGGCAGTCAACTC 58 89795041 89795060 TCATTCATGGTCAAATTGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sf3b4 ENSMUSG00000068856 ENSMUST00000076372 2 1 1 74 3 95977669 95977687 TGGAGTCATCCTACAGACC 59 95977725 95977743 TTAATGAAGGCGTAACCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr366 ENSMUSG00000068947 ENSMUST00000091001 1 1 1 60 2 37075137 37075155 TCAGTCATCATTGCATCCA 58 37075176 37075197 GAAAGAAGTACATAGGAGTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Urm1 ENSMUSG00000069020 ENSMUST00000091142 1 1 1 128 2 29682907 29682925 TTGGTTTCCTAAACATGGC 58 29688273 29696930 GTATATCCCAGGGTTCCTC 58 NA InUTR Mus musculus 50 Dusp22 ENSMUSG00000069255 ENSMUST00000091672,ENSMUST00000095914 2 2 2 172 13 30797556 30799803 TGTCTTGTACATTGCCTGG 59 30799939 30799957 TGTTTCTCAAACTCCTGCA 59 NA Mus musculus 50 V1ri3 ENSMUSG00000069293 ENSMUST00000091733 3 1 1 60 13 22446220 22446240 CTGGAGTAATGTTATCCACAC 58 22446262 22446280 TCCCATAATTCCAGGTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bhmt ENSMUSG00000069324 ENSMUST00000091776 1 1 1 85 18 87927413 87927431 TGACCCTTAGAAACATCGA 57 87927480 87927498 CAGACAGAATAGCAGTCCA 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ssbp4 ENSMUSG00000070003 ENSMUST00000049908 3 1 1 129 8 73122917 73123024 GTAACTCGATCCCGTACTC 58 73122641 73122660 GTGTACATATTCTCGCTGGA 59 NA Mus musculus 50 Zfp712 ENSMUSG00000071284 ENSMUST00000071628 1 1 1 60 13 67770211 67770231 TCATCACTATCTAAACACGGG 59 67770171 67770190 ATACTTCACAGTTGTATGGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 EG436523 ENSMUSG00000071517 ENSMUST00000095999 2 1 1 84 6 41392814 41393348 CTTAGCTTTGGTGTCAGTG 58 41392748 41392766 GATAGGAGGCTTCACAGTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Klrg2 ENSMUSG00000071537 ENSMUST00000096030 1 1 1 95 6 38579830 38579848 CTCTGAAGAAGCCCAAGAC 59 38578178 38579772 CTTAAGAAGTCCTGGGTGTG 59 NA Mus musculus 50 Gm967 ENSMUSG00000071604 ENSMUST00000096164 3 1 1 81 19 24054126 24054144 GAAGTGTTCTGTCCTCTGG 59 24053946 24054081 GGAATGAAGACTCCTGCTC 59 NA Mus musculus 50 Apcdd1 ENSMUSG00000071847 ENSMUST00000096554 2 1 1 118 18 63093609 63093627 TTCAAGGAGTCACAGTGTC 59 63093709 63096574 GACCTTACTTCACAGCCTG 59 NA Mus musculus 50 ENSMUSG00000072655 ENSMUSG00000072655 ENSMUST00000100766 3 1 1 61 6 149234636 149234657 ATCATGGACCCTAAAGAATACG 59 149234596 149234617 TTCTACATGTTTCAGTAGAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 9030025P20Rik ENSMUSG00000073455 ENSMUST00000061688,ENSMUST00000097397,ENSMUST00000097396 2 3 3 60 17 15148689 15148709 GAAATTCAGTATTCGCCTTGG 59 15148728 15149927 GTATCTCAAGAAACAACTCTGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Creg1 ENSMUSG00000073530 ENSMUST00000045721 2 1 2 123 1 160744999 160762854 GAAATTTGGCTTGAAGTGTG 58 160744895 160744913 CAATCAGGTAAAGGGTCAC 57 NA Mus musculus 50 D230012E17Rik ENSMUSG00000073678 ENSMUST00000097739 2 1 1 147 1 54532694 54532712 ACTACTAACTGCTCCAGAG 57 54532565 54532583 TTCCAATACAGATGACCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 Pramel4 ENSMUSG00000073724 ENSMUST00000105761 2 1 6 167 4 143649113 143655635 TGAATTGGACTGCAGACTC 59 143655766 143655784 CATCCTTGAAGAGTGGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 9530048O09Rik ENSMUSG00000073771 ENSMUST00000097915 2 1 2 134 4 116793450 116794825 AGGTTGAACAGATTGTGGA 58 116793334 116793352 ATTTGAAACGAAGGTCCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr597 ENSMUSG00000073952 ENSMUST00000098203 3 1 1 62 7 110469496 110469514 AGCAGATGATGTACAGGTC 58 110469540 110469558 AATCCCAGAATGCTAAACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074057 ENSMUSG00000074057 ENSMUST00000098356 1 1 1 114 7 86611754 86611772 ATCTGTCAATCTCTGGGTC 58 86611850 86611868 GTCCCAGTTATTCACCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074574 ENSMUSG00000074574 ENSMUST00000099065 2 1 1 62 2 168456382 168456401 AGAAGGCGCTTTATAGACAC 59 168456339 168456357 GAAGACATGGATGCAAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Kcng1 ENSMUSG00000074575 ENSMUST00000109191,ENSMUST00000109189 1 2 3 69 2 168094759 168106386 GAACTTAAGGCCCAAGAGG 59 168094708 168094726 TCATAGTGCGAGTTGTCTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 ENSMUSG00000074638 ENSMUSG00000074638 ENSMUST00000099152 2 1 1 67 13 119428799 119428817 GTTGGTCAGCAAAGAAAGG 59 119428750 119428768 AAATACATCGTGCTTTCCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1700041B20Rik ENSMUSG00000074825 ENSMUST00000099409 3 1 2 273 2 126967462 126967727 GGATACATCCAGTGACCAG 59 126967207 126967226 AGATAAACATAGTGCCCTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 OTTMUSG00000000697 ENSMUSG00000074973 ENSMUST00000099629 3 1 1 71 13 33030535 33030553 CTCTGTCTCAAGCAAATGG 58 33030482 33030502 GTATTGAAGGGTTGCTTTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm1968 ENSMUSG00000075286 ENSMUST00000100016 1 1 1 91 16 29958864 29958883 ACCCATAACTCCAACTTCAG 59 29958695 29958810 CAGCTAGGACATCAGAGTG 59 NA Mus musculus 50 Crebbp ENSMUSG00000075417 ENSMUST00000100216 3 1 1 69 16 4082502 4082520 CAGGAAGGACTATCACCAC 59 4082451 4082469 AAGAGGAGGACAGGAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Apobec3 ENSMUSG00000075536 ENSMUST00000100423 3 1 1 81 15 79737385 79741541 ATCAAGGAGTCAAGGTCTC 58 79741585 79741604 GAAGATCTGGAGTACATGGT 58 NA InUTR Mus musculus 50 ENSMUSG00000075547 ENSMUSG00000075547 ENSMUST00000100443 3 1 1 64 2 5833503 5833521 TATAGCATTCACCAAGCCA 58 5833549 5833567 CTACAGAGGTGGAAGAAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp652 ENSMUSG00000075595 ENSMUST00000107717,ENSMUST00000091565 2 2 2 88 11 95614712 95614730 GTGGAAAGTCTTTCAAGCG 59 95614782 95615233 ATCGCAGTTCTCACATCTG 59 NA Mus musculus 50 IGKV9-124 ENSMUSG00000076511 ENSMUST00000103312 3 1 1 120 6 67892348 67892480 GGTACCAGATGTGACATCC 59 67892246 67892265 GAAGCCAGCTTAAGTAACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV15-103 ENSMUSG00000076523 ENSMUST00000103324 3 1 1 60 6 68387632 68387650 TGACATCCAGATGAACCAG 58 68387674 68387692 GGTAATTGTGTCTCCAAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV10-94 ENSMUSG00000076529 ENSMUST00000103330 3 1 1 225 6 68654781 68654925 AGGTACCAGATGTGATATCCA 59 68654576 68654594 ATAATCTGTCCCAGACCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001079020.1 ENSMUSG00000078222 ENSMUST00000105020 1 1 1 60 X 3242561 3242579 CATCTGTGACTTGACTTCC 57 3242519 3242538 CCATGCCATAGGTATTAGTC 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A2AJD7_MOUSE ENSMUSG00000078632 ENSMUST00000107017 3 1 1 86 11 103352475 103352493 TTGGGTGCAATTTACTCAC 58 103328835 103352425 GGTTGAGGATTAACTGCTG 58 NA Mus musculus 50 NP_001079007.1 ENSMUSG00000078662 ENSMUST00000107321 1 1 2 80 4 73535377 73535396 CGACTTATGAATGGATCCTG 57 73535038 73535334 CATCAAACCAAAGACCTGG 58 NA Nonspecific Mus musculus 50 A2AKP6_MOUSE ENSMUSG00000078722 ENSMUST00000107981 1 1 1 114 4 42804820 42804838 ATGAAGAGCAGGAGAAGAG 58 42795605 42804742 CTACATAGTGAGACCCAGG 58 NA Nonspecific Mus musculus 50 Tmem179b ENSMUSG00000079437 ENSMUST00000010249 3 1 1 87 19 8847321 8847533 CCTACATACTGCTGAAACCT 59 8847253 8847272 TTTAAACTTGCACTGCATGG 59 NA Mus musculus 50 NP_001092786.1 ENSMUSG00000079638 ENSMUST00000115191 3 1 1 60 X 34826677 34826858 TGCGAATGGTATAAAGACTC 57 34826881 34826899 CTCTCCCTCATTTCTTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG382275 ENSMUSG00000079655 ENSMUST00000089165 3 1 1 125 X 25476589 25476607 ACAACTGAACGCTTAAGAG 57 25470878 25476502 GCCTCTTTACTTCAGAATGAG 58 NA InUTR Mus musculus 50 Scpep1 ENSMUSG00000000278 ENSMUST00000100630 2 1 2 82 11 88805182 88808473 CGAAATACTACCTGGACGG 59 88805118 88805136 AGTTCTACACTGATGCCAG 58 NA Mus musculus 50 Myo18a ENSMUSG00000000631 ENSMUST00000108375,ENSMUST00000108376,ENSMUST00000000645,ENSMUST00000092884 2 4 10 81 11 77667383 77668187 CTCATCAACAGTTTGCAGG 59 77671232 77671250 CTGAGTCCACATCTGAGTC 59 NA Mus musculus 50 Tpd52l2 ENSMUSG00000000827 ENSMUST00000069712 3 1 6 157 2 181236712 181236730 AAGCAGAACCTGTCTAGGA 59 181242963 181246287 GAGTAGCTGCTCATGTCTC 59 NA Mus musculus 50 Fmr1 ENSMUSG00000000838 ENSMUST00000114655,ENSMUST00000114654 3 2 8 80 X 65966433 65966451 CGAACAGATAATCGTCCAC 57 65966495 65968703 GCAGTTAACTGTGATCTGC 58 NA Mus musculus 50 Def8 ENSMUSG00000001482 ENSMUST00000001522,ENSMUST00000093049,ENSMUST00000065534,ENSMUST00000108832,ENSMUST00000108830,ENSMUST00000108833 3 6 6 165 8 125971804 125973210 CTTCTGAAGACACTTTGCC 58 125976685 125976703 TGTTTGCATTCTTCGATGG 58 NA Mus musculus 50 Folh1 ENSMUSG00000001773 ENSMUST00000107271 2 1 2 158 7 93905474 93905492 TCCTGTCCATCCTATTGGA 59 93894693 93895298 TGCATCTTGACCTTCTGTG 59 NA Mus musculus 50 Dsg4 ENSMUSG00000001804 ENSMUST00000097660 3 1 2 170 18 20621209 20623362 TTAGACACATCAGAAGACAGC 59 20623494 20623512 CTGAGCTCCCATAGAAACC 59 NA Mus musculus 50 Ndufb2 ENSMUSG00000002416 ENSMUST00000002490 3 1 1 163 6 39546546 39546564 GTGGTTCTGGATTCTTTGG 58 39549391 39549409 GAAATGTCTCACCTTGCTC 58 NA DesignNoJunction, InUTR Mus musculus 50 Tsc2 ENSMUSG00000002496 ENSMUST00000088420,ENSMUST00000097374,ENSMUST00000115292,ENSMUST00000115291,ENSMUST00000115290 2 5 7 80 17 24739090 24739109 CCTGTACAAGTCATTGTCAG 58 24738392 24739049 GAAAGAAGCCACTGTATTAGAG 58 NA Mus musculus 50 Mical3 ENSMUSG00000003178 ENSMUST00000088567 1 1 2 80 6 120959060 120959079 TGCTTCAAGTGTGAGTACTG 59 120952880 120959018 ACAGTAGAATTTGCCATCCT 59 NA Mus musculus 50 Ddr1 ENSMUSG00000003534 ENSMUST00000003628,ENSMUST00000097333 1 2 2 95 17 35822004 35822022 GACTTCCCTATCAGTGTGC 59 35821246 35821945 CAGGAAATCATTCCTGGCA 59 NA Mus musculus 50 Cacna1b ENSMUSG00000004113 ENSMUST00000114442 3 1 7 130 2 24487514 24487532 TGTTGCTGTAATCATGGAC 57 24482423 24487421 TATAATGAATCCGGCAACAC 58 NA Mus musculus 50 Cd33 ENSMUSG00000004609 ENSMUST00000004728 3 1 2 81 7 50784915 50785243 CTATCAAGAGGCAGGAAGC 59 50784852 50784870 GAACATCCTGGAGTCACAG 59 NA Mus musculus 50 Arid3b ENSMUSG00000004661 ENSMUST00000004780,ENSMUST00000114165 1 2 4 129 9 57643916 57643934 AGATCAGAATCAACGGCAG 59 57640483 57642751 AACAGCACACCTGTATAGG 58 NA Mus musculus 50 Ncoa2 ENSMUSG00000005886 ENSMUST00000081713,ENSMUST00000006037,ENSMUST00000068304 3 3 3 80 1 13170612 13170630 GCATTCAGAAGTTCCACAC 59 13167291 13170569 CTTGTCTCAGAACTTCATGG 58 NA Mus musculus 50 Nelf ENSMUSG00000006476 ENSMUST00000116574,ENSMUST00000114388,ENSMUST00000114386,ENSMUST00000114392,ENSMUST00000100334,ENSMUST00000006646,ENSMUST00000102931,ENSMUST00000074422,ENSMUST00000114381 1 9 9 80 2 24916645 24916787 GAGGACATGATCCACTTCTG 59 24916829 24916848 CATGATGTGGATGACATTCG 59 NA Mus musculus 50 Hipk1 ENSMUSG00000008730 ENSMUST00000029438,ENSMUST00000106845 1 2 3 100 3 103562525 103562543 TTCCTTACAACCTGGAACC 59 103558231 103562461 TTGCTTGTAGTCCAGTCTG 59 NA Mus musculus 50 Psen2 ENSMUSG00000010609 ENSMUST00000111106,ENSMUST00000010753,ENSMUST00000111108,ENSMUST00000111105 1 4 4 204 1 182163833 182165130 CTCTGTGTACGATCTCGTG 59 182159608 182159981 GGAGTCTTCTTCCATCTCTG 59 NA DesignRelaxed Mus musculus 50 Dhdds ENSMUSG00000012117 ENSMUST00000012262,ENSMUST00000105887,ENSMUST00000105889,ENSMUST00000105885 3 4 5 93 4 133548488 133550087 ATGGAAGAACAGGAGAAGC 59 133548413 133548431 CAATCTTCTCCTGGAGGTC 59 NA Mus musculus 50 Nit1 ENSMUSG00000013997 ENSMUST00000111289,ENSMUST00000014141,ENSMUST00000111295 2 3 3 63 1 173273953 173274207 TTGAACAGCAAGGGATCAG 59 173273908 173273926 GGATCTCTACATCGCACAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Acot8 ENSMUSG00000017307 ENSMUST00000017451 3 1 2 98 2 164620652 164620671 GACATCAAGATGCATTGCTG 59 164618502 164620592 GAGAGCCACCTTATACTTGG 59 NA Mus musculus 50 Abr ENSMUSG00000017631 ENSMUST00000108408,ENSMUST00000072740,ENSMUST00000108407,ENSMUST00000094012,ENSMUST00000040910 3 5 7 81 11 76286040 76286058 ATAAAGTCGCTCTGGAGAC 58 76282265 76285997 TTCACTTTGAGTTCCTCAGAG 59 NA Mus musculus 50 Rhot1 ENSMUSG00000017686 ENSMUST00000077451,ENSMUST00000017831 1 2 4 82 11 80068298 80068316 CTTGCAATACTGCTGATGC 59 80068361 80069379 TCTGTAATGATCCTCTGGGT 59 NA Mus musculus 50 Myo1c ENSMUSG00000017774 ENSMUST00000102505,ENSMUST00000069057,ENSMUST00000102504,ENSMUST00000108431,ENSMUST00000057572 3 5 6 80 11 75479046 75479064 GGAAATCTCTAGACCGAGG 58 75479108 75479206 TATCCAGAAACCCAGTCAC 58 NA Mus musculus 50 Ppp2r5c ENSMUSG00000017843 ENSMUST00000065483,ENSMUST00000084985,ENSMUST00000017987 3 3 4 110 12 111807244 111807263 AGTTCAAAGCAGAGAAACTC 58 111808975 111812970 GACTATACACTGCATACTGG 57 NA Mus musculus 50 Smurf2 ENSMUSG00000018363 ENSMUST00000100310,ENSMUST00000092517,ENSMUST00000103067 2 3 3 80 11 106689863 106689883 CAGAAGGGCTTTAATGAAGTC 58 106686110 106689822 TCCACAAATAATGAGCTCCA 59 NA Mus musculus 50 Aatf ENSMUSG00000018697 ENSMUST00000018841 1 1 2 80 11 84325687 84325705 AGACCACTTCTAGGAAAGC 58 84325063 84325645 CATCAGATGCTTCGTTATCAG 58 NA Mus musculus 50 Sema6a ENSMUSG00000019647 ENSMUST00000115449 1 1 4 102 18 47442963 47442981 TCCTGAGAACAATGGTCAG 58 47441464 47441560 ACATTCATCTCCTCCAGGA 59 NA Mus musculus 50 Cobl ENSMUSG00000020173 ENSMUST00000093315 2 1 5 90 11 12273366 12275821 ACAGAAGAGTTCTTCTGACC 58 12269658 12269676 GTCTCATCATTGCCAAGTG 58 NA Mus musculus 50 Adarb1 ENSMUSG00000020262 ENSMUST00000020496,ENSMUST00000105404,ENSMUST00000105405 3 3 6 137 10 76775226 76775244 ATTTCAGAAGTCAGAGCGG 59 76774004 76775125 TGTCTATCTGCTGGTTCCT 59 NA Mus musculus 50 Clk4 ENSMUSG00000020385 ENSMUST00000080120,ENSMUST00000020652 2 2 6 84 11 51080758 51080776 GCAAGAGAAGGTCTCACAG 59 51080823 51081675 ATGGAACATCAATCCGAGTC 59 NA Mus musculus 50 Itgb4 ENSMUSG00000020758 ENSMUST00000106461,ENSMUST00000106460,ENSMUST00000068981,ENSMUST00000106458 2 4 5 157 11 115850051 115850069 TGAGATCAACTACTCTGCG 58 115850323 115851041 CCTCTTCTGCTTTCTTAAGC 58 NA Mus musculus 50 Ankrd40 ENSMUSG00000020864 ENSMUST00000107818,ENSMUST00000051221,ENSMUST00000021227 2 3 3 101 11 94196213 94199664 ATATGCAAGAGCTGGTACTC 59 94199728 94199746 CTTGGTAGGTGAGTTCCTG 59 NA Mus musculus 50 Cacna1g ENSMUSG00000020866 ENSMUST00000107792,ENSMUST00000107788 3 2 14 111 11 94280277 94287109 AAAGAGAAGGAAAGCCCAG 59 94280184 94280202 GACACCAGTGATGAAGAGG 59 NA Mus musculus 50 Six6os1 ENSMUSG00000021098 ENSMUST00000110489,ENSMUST00000044000 3 2 2 80 12 74014254 74016353 AGCTGTAGTAACTGGAAGC 58 74014192 74014210 TTGGTAAGCAGTAAGCTGG 59 NA Mus musculus 50 Ciita ENSMUSG00000022504 ENSMUST00000023147,ENSMUST00000100187 2 2 3 168 16 10488512 10501872 TGCAAGACCATAGTCTGTG 59 10502004 10502244 GTATCTGTGTCTGGCTCTG 59 NA Mus musculus 50 Nat13 ENSMUSG00000022698 ENSMUST00000063520,ENSMUST00000063542,ENSMUST00000023382,ENSMUST00000114661 3 4 5 82 16 44158046 44159583 GACAATATCTATCTGCATGTCC 58 44159625 44159644 GTCTCGATAATCTCAAAGCC 58 NA Mus musculus 50 Zbtb20 ENSMUSG00000022708 ENSMUST00000114694,ENSMUST00000079441,ENSMUST00000114695 3 3 5 122 16 43577297 43577682 TGCTAGAACGGAAGAAACC 59 43577767 43577786 AAACAGCTTCAAAGTTCAGG 58 NA Mus musculus 50 2610528E23Rik ENSMUSG00000022748 ENSMUST00000023430,ENSMUST00000114371 3 2 4 80 16 57303841 57303860 TAAAGTTTCTGGTGTTCGAC 58 57302383 57303798 CCTCCTTTCTTATCTCGGG 58 NA Mus musculus 50 Mylk ENSMUSG00000022836 ENSMUST00000068988 3 1 3 85 16 34922008 34953862 ATATCCGAGAAATGCTGGG 59 34953911 34953929 GTATGTATCACCACACCCA 58 NA Mus musculus 50 Son ENSMUSG00000022961 ENSMUST00000114037,ENSMUST00000023683,ENSMUST00000114036 2 3 3 88 16 91660748 91660767 TTAGTAGATCTCCCATTCGG 57 91660817 91662356 TTGAGCCTTATCCAAATCTG 57 NA Mus musculus 50 Wnt1 ENSMUSG00000022997 ENSMUST00000023734,ENSMUST00000109138 3 2 2 112 15 98621470 98621488 AAATGGCAATTCCGAAACC 59 98622138 98622156 GTGATTGCGAAGATGAACG 59 NA DesignNoJunction Mus musculus 50 Serinc2 ENSMUSG00000023232 ENSMUST00000105996,ENSMUST00000075677 3 2 2 80 4 129940405 129940839 CTCCTTTCCCAAGATCTGG 59 129940343 129940361 TCAACAAACAGGATCAGCT 59 NA Mus musculus 50 Rfx2 ENSMUSG00000024206 ENSMUST00000002444,ENSMUST00000086801 3 2 2 92 17 56924179 56924728 AGTACATAGATGTGTCCCAC 58 56924106 56924124 TCACATCATGAAGGGTGAC 59 NA Mus musculus 50 MGI:1928484 ENSMUSG00000024213 ENSMUST00000062397,ENSMUST00000025050 3 2 2 92 17 27717890 27718961 TGAACATCGGAAGGAAGAG 58 27717816 27717834 TCTCAAAGTATGACGCCTG 59 NA Nonspecific Mus musculus 50 Bat3 ENSMUSG00000024392 ENSMUST00000087274,ENSMUST00000025250 1 2 2 90 17 35282104 35282122 GTGTGGATATCATCCGGAC 59 35282175 35282283 AATCCACTGTCTGTACAGTG 59 NA Mus musculus 50 Slk ENSMUSG00000025060 ENSMUST00000026043 1 1 2 126 19 47699866 47699885 AGAACAAGAGCACACTAACC 59 47699971 47709976 CTGAACAAATTCTTGTTCCTCC 59 NA Mus musculus 50 Ndufb8 ENSMUSG00000025204 ENSMUST00000026222 2 1 1 60 19 44628169 44628188 TCAGAACTCAGGATGAACTG 59 44627313 44627332 TCCTGATGTACATGTCTAGG 57 NA DesignNoJunction Mus musculus 50 Msx3 ENSMUSG00000025469 ENSMUST00000055353,ENSMUST00000106084 1 2 2 65 7 147233905 147233923 TACTTATCCATTGCGGAGC 59 147233858 147233876 CTTGACCTGAGTCTCAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rplp2 ENSMUSG00000025508 ENSMUST00000084434,ENSMUST00000106004 2 2 3 60 7 148633881 148633899 AAATACTAGACAGCGTGGG 59 148633922 148634635 TCACTGATGACCTTGTTGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Copg2 ENSMUSG00000025607 ENSMUST00000026697 2 1 2 81 6 30698958 30698977 AGGTGGCTATGACTTATTGG 59 30698895 30698914 TCTCTTTGCTTCCACAGTC 59 NA Mus musculus 50 Crisp4 ENSMUSG00000025774 ENSMUST00000115344 3 1 4 98 1 18127128 18131510 TGTATTCTGCACAGGTATGG 59 18124235 18124254 GCTCTATCCAGTTTGAGAGG 59 NA Mus musculus 50 Sec61a2 ENSMUSG00000025816 ENSMUST00000026926,ENSMUST00000114951 1 2 4 93 2 5803686 5803704 ATTGTGTATGTCATGACGG 57 5800731 5803629 TCAATGTAAGCAATCCCTG 57 NA Mus musculus 50 Pdgfa ENSMUSG00000025856 ENSMUST00000110897,ENSMUST00000110896,ENSMUST00000076095 2 3 4 103 5 139455173 139455191 ATTGAAAGAGGTCCAGGTG 59 139453170 139455106 CTCACCTCACATCTGTCTC 59 NA Mus musculus 50 Asb1 ENSMUSG00000026311 ENSMUST00000113020,ENSMUST00000027538,ENSMUST00000086843 3 3 3 87 1 93440808 93440826 ATGATGCAGCCTATGTAGG 58 93443507 93443525 ACAGACTTCTCATTGATGC 57 NA DesignNoJunction Mus musculus 50 Cenpl ENSMUSG00000026708 ENSMUST00000111618,ENSMUST00000111620,ENSMUST00000028035 1 3 4 113 1 163008598 163013044 CGTTTCTTGTCCAGATTCTC 58 163013120 163013138 CAGTCTCCTGAAGACTCTC 58 NA Mus musculus 50 Med27 ENSMUSG00000026799 ENSMUST00000028139,ENSMUST00000113830 2 2 2 80 2 29269026 29326819 TTCTACCACCTCAGTATGTC 58 29326861 29326880 GTCTCGATAAGTGAATGGAC 57 NA Mus musculus 50 Hspa5 ENSMUSG00000026864 ENSMUST00000028222,ENSMUST00000100171 3 2 2 101 2 34628815 34629347 TTTGGGAAAGAAGGTTACCC 59 34629411 34629429 TTCAGTCCAGCAATAGTGC 59 NA Mus musculus 50 Pax8 ENSMUSG00000026976 ENSMUST00000028355 2 1 2 80 2 24292011 24292031 ACATCTTCCAATACACCTCTG 59 24291473 24291970 GAAGGGTGAATGAGGATCTG 59 NA Mus musculus 50 Hat1 ENSMUSG00000027018 ENSMUST00000112122,ENSMUST00000028408 2 2 2 80 2 71228040 71247048 ATCGAGCTGAAACTAGTTCG 59 71247089 71247109 GAGCTGATGGGTATATTCAGG 59 NA Mus musculus 50 Ube2l6 ENSMUSG00000027078 ENSMUST00000111637 2 1 3 80 2 84643667 84646501 GGATTACAAAGGACCAGCT 59 84646545 84646563 GCTTGAATGGATACTCCCT 58 NA Mus musculus 50 Cdc25b ENSMUSG00000027330 ENSMUST00000028804 2 1 2 80 2 131017662 131018303 TGACTTGATGTGTCTTACCAC 59 131018344 131018363 GGAGTCAAGGAAGAAGACTG 59 NA Mus musculus 50 Dnmt3b ENSMUSG00000027478 ENSMUST00000056495,ENSMUST00000109771 2 2 10 84 2 153500773 153501472 AAGAATTTCAGGAGCCACC 59 153501520 153501538 CCATCAAACAGAGACAGGA 58 NA Mus musculus 50 Nkain4 ENSMUSG00000027574 ENSMUST00000108873,ENSMUST00000103053,ENSMUST00000029091 3 3 5 127 2 180678877 180678895 TTTGACTTCCTGGGTTACC 59 180678513 180678786 GCCCATACAACATACACCA 59 NA Mus musculus 50 0610011L14Rik ENSMUSG00000027628 ENSMUST00000109570,ENSMUST00000029158 2 2 2 108 2 156381745 156381763 TTTGTGGACATTGTCTCCC 59 156392643 156392661 TCTCAGCTTTCTTCCTCAG 58 NA DesignNoJunction Mus musculus 50 Dnajc19 ENSMUSG00000027679 ENSMUST00000011029 2 1 2 108 3 33977760 33978138 ATTAGGTGTAAGCCCTACTG 58 33957011 33957029 TTTCAGACCTTCTTCCACC 59 NA Mus musculus 50 Ampd2 ENSMUSG00000027889 ENSMUST00000102638,ENSMUST00000102637,ENSMUST00000106668,ENSMUST00000078912 3 4 5 81 3 107883089 107883199 CGACTCAGACTTACAGCTG 59 107883026 107883044 TTCCAATACCACATCACGT 58 NA Mus musculus 50 Tars2 ENSMUSG00000028107 ENSMUST00000029752,ENSMUST00000074339,ENSMUST00000098857 3 3 3 87 3 95558301 95558320 AGATATCACTTCCTGAAGGC 58 95557045 95558253 AGTGTTACACTGATCTGATGG 59 NA Mus musculus 50 Cdh17 ENSMUSG00000028217 ENSMUST00000029871 3 1 2 101 4 11741867 11742015 CTTACCAGTTACTTTCTGCC 58 11742079 11742097 AGAAGTATACCAACTGCCA 57 NA Mus musculus 50 Ubap2 ENSMUSG00000028433 ENSMUST00000108068,ENSMUST00000030143,ENSMUST00000108066 1 3 4 80 4 41180741 41182564 GCTAAAGTTAAGCAGCTTATGG 59 41180682 41180703 ATCACCATTACAGTCATGTAGG 59 NA Mus musculus 50 Mllt3 ENSMUSG00000028496 ENSMUST00000097995 1 1 5 121 4 87420045 87429565 TGAATGTGACAAGATCGTG 57 87419942 87419963 GGTAACTCTGTAATTTACGGAC 58 NA Mus musculus 50 Slc35d1 ENSMUSG00000028521 ENSMUST00000036195,ENSMUST00000072164,ENSMUST00000106846,ENSMUST00000094947 3 4 4 99 4 102885830 102886486 TACCTCGAAAGACGTTTCC 59 102883959 102883977 AGAACTGTAAACATGGGCA 59 NA Mus musculus 50 Orc1l ENSMUSG00000028587 ENSMUST00000075835 2 1 2 81 4 108268199 108268219 CTCCTGCTAATATTGTCATCC 57 108269746 108269870 GGTTTATTAGGCTTTCTGGT 57 NA Mus musculus 50 2810410C14Rik ENSMUSG00000028621 ENSMUST00000106756 1 1 5 167 4 106743144 106743484 GACCTTGAGAGCTGTTCTG 59 106743613 106746487 TACTACACCTCGTAGGATGAG 59 NA Mus musculus 50 Cap1 ENSMUSG00000028656 ENSMUST00000106255,ENSMUST00000069533,ENSMUST00000106257 2 3 3 81 4 122542507 122544735 AGAGATGTGGATAAGAAGCA 58 122542445 122542463 ACTCCTTGATGTAAGCCTG 58 NA Mus musculus 50 2510006D16Rik ENSMUSG00000028797 ENSMUST00000102591,ENSMUST00000071840 2 2 2 81 4 129279491 129284335 CTTTGGCATCAACAGATCTG 59 129284379 129284397 ACCTTCCCAACAATCAGTG 59 NA Mus musculus 50 Espn ENSMUSG00000028943 ENSMUST00000105659,ENSMUST00000030785,ENSMUST00000084114,ENSMUST00000070018,ENSMUST00000080042,ENSMUST00000105657 3 6 13 234 4 151508544 151509593 GATCGAATCGAGGGATTCC 59 151508328 151508347 TTATTCAGATGCAGTCCCAC 59 NA DesignRelaxed Mus musculus 50 Ski ENSMUSG00000029050 ENSMUST00000084103,ENSMUST00000030917,ENSMUST00000105629 3 3 3 100 4 154534800 154534956 GTTCCTCCAATAAGAGCCT 58 154534718 154534736 GGACGTCTCTTTCTCACTC 59 NA Mus musculus 50 Ablim2 ENSMUSG00000029095 ENSMUST00000114205,ENSMUST00000114206,ENSMUST00000101280,ENSMUST00000114204 3 4 7 105 5 36200517 36200535 ACTAACTCTCCAGACCTGG 59 36200601 36217482 TCTTATACTGTGAGTAGAGGCT 59 NA Mus musculus 50 Klhl8 ENSMUSG00000029312 ENSMUST00000112815,ENSMUST00000112811,ENSMUST00000031254,ENSMUST00000112817 1 4 4 80 5 104296668 104296880 GCTCTGTGGCTTTAATAAACC 59 104296608 104296626 GATACCTCTCCACACTGGA 59 NA Mus musculus 50 Klhl8 ENSMUSG00000029312 ENSMUST00000112815,ENSMUST00000112811,ENSMUST00000031254,ENSMUST00000112817 2 4 4 81 5 104296666 104296879 CTCTGTGGCTTTAATAAACCAC 59 104296606 104296624 GTGATACCTCTCCACACTG 59 NA Mus musculus 50 Nos1 ENSMUSG00000029361 ENSMUST00000086451,ENSMUST00000111935 2 2 4 95 5 118364444 118369415 GAGAGGAAGAGCTACAAGG 58 118369473 118369492 AAAGTTGTCTCTGAGGTCTG 59 NA Mus musculus 50 Glcci1 ENSMUSG00000029638 ENSMUST00000050350 2 1 2 180 6 8377169 8487818 AACTTGTCCCGATTCTGTG 59 8487962 8508511 GCAACTAGGTGTCTGAGTG 59 NA Mus musculus 50 C8b ENSMUSG00000029656 ENSMUST00000031663 2 1 2 95 4 104459521 104459539 ATGGCGTTATGGATCTTGG 59 104459598 104463092 GGAACTTGCTTTGAGTGTG 59 NA Mus musculus 50 Auts2 ENSMUSG00000029673 ENSMUST00000061007 2 1 3 81 5 132734840 132734858 AGAATGACCGCAATCTCTG 59 132653762 132734796 CGTATTCCTGGAGGAATCTG 59 NA Mus musculus 50 Asb15 ENSMUSG00000029685 ENSMUST00000031696,ENSMUST00000090534 2 2 2 83 6 24508705 24508723 ATGAGAAAGGATGGTTCCC 58 24508769 24509158 TATAGGATGCATCCAGAACC 58 NA Mus musculus 50 Arhgap25 ENSMUSG00000030047 ENSMUST00000113637,ENSMUST00000101197,ENSMUST00000071024 1 3 3 82 6 87438292 87442179 TATTCCAGCCTCAAGTGAC 58 87438228 87438246 ACTCCTCCATCTCTACCTG 59 NA Mus musculus 50 Ptms ENSMUSG00000030122 ENSMUST00000032216,ENSMUST00000112444 1 2 2 152 6 124864728 124864951 GAAAGAAGTAGTGGAGGAGG 59 124864430 124864448 TCTTCAGCAGTTCTCTTCC 58 NA Mus musculus 50 Rad18 ENSMUSG00000030254 ENSMUST00000113178 2 1 3 98 6 112625810 112625829 TTCAAGGAAACAAACAGCAG 59 112615324 112625750 AACCATGACCTGATTTAGGA 58 NA Mus musculus 50 Ergic2 ENSMUSG00000030304 ENSMUST00000032447 1 1 2 145 6 148138026 148138044 AATCCTTTGGATGGAACTG 57 148132686 148136562 GAAAGAGATCGCCTTTCTG 58 NA Mus musculus 50 Prmt3 ENSMUSG00000030505 ENSMUST00000085271 3 1 3 85 7 57082189 57082207 AGAAAGCAGTTATACCGGA 57 57082255 57084310 CCCATCCATCTTGATATCAC 57 NA Mus musculus 50 5730507A09Rik ENSMUSG00000030518 ENSMUST00000107504,ENSMUST00000032731 3 2 2 114 7 71920670 71920688 ACTCTGTATGATGTTGCCA 58 71912598 71920592 GATCAACACTTGCAACCTG 59 NA InUTR Mus musculus 50 Mphosph10 ENSMUSG00000030521 ENSMUST00000032735 3 1 2 82 7 71532388 71532407 AGATACAAGTCCCTTAGCTG 58 71530697 71532345 TCTCATTCATCTTCTCCTGTC 58 NA Mus musculus 50 Lyrm1 ENSMUSG00000030922 ENSMUST00000106518,ENSMUST00000054440,ENSMUST00000106517,ENSMUST00000106516 2 4 4 71 7 127053428 127053449 ACAGTACATACTAAAGGAAGCC 59 127057691 127057709 TTAATCAGCTCTGGGTCTG 58 NA DesignNoJunction Mus musculus 50 4631426J05Rik ENSMUSG00000030930 ENSMUST00000077472,ENSMUST00000080215 3 2 2 84 7 139454421 139454439 CTGACCCAAGACTTCATCC 59 139439693 139454373 CTGAGTACAACCTCTCCAC 59 NA Mus musculus 50 Mcf2 ENSMUSG00000031139 ENSMUST00000063507 3 1 3 129 X 57406160 57408790 TCTATTGCAAGGCAAAGTG 58 57389523 57389541 CTAAGTGTAAGCTCCCAGG 59 NA Mus musculus 50 Timm17b ENSMUSG00000031158 ENSMUST00000033498,ENSMUST00000115651 3 2 2 165 X 7478094 7478112 CGAATTGTGGATGATTGCG 59 7480853 7483205 CAAAGCTTCCTCCAATCTG 58 NA DesignRelaxed Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112408,ENSMUST00000112406,ENSMUST00000112403,ENSMUST00000112402,ENSMUST00000112401,ENSMUST00000078682,ENSMUST00000112400,ENSMUST00000112398 1 8 10 84 X 156896776 156896794 CTCTTGTCAGTCTCATCCC 59 156899311 156903525 CTCTGGGATTTGACTCCTG 59 NA Mus musculus 50 Star ENSMUSG00000031574 ENSMUST00000084024,ENSMUST00000033979 2 2 2 150 8 26919075 26919094 GCTCCTATAGACATATGCGG 59 26920030 26920288 AGTTGAGAACCAAGCAGAG 59 NA Mus musculus 50 Arl2bp ENSMUSG00000031776 ENSMUST00000034228,ENSMUST00000109527 1 2 2 60 8 97191514 97191532 CAGAATTTGATGCTGTGGT 58 97191556 97194236 AACTGGAACTCATCATCCA 58 NA DesignRelaxed Mus musculus 50 Cotl1 ENSMUSG00000031827 ENSMUST00000034285 1 1 1 163 8 122346638 122346656 AAGATCCAAGTTTGCCCTC 59 122334195 122334213 TCCTGATGAAGTCTTCCTC 57 NA DesignNoJunction Mus musculus 50 Usp28 ENSMUSG00000032267 ENSMUST00000034805 2 1 2 80 9 48843996 48844014 TATCATGAAGGTGGCTCAG 58 48844057 48847097 GCATTCAGCTCCTTATACTC 57 NA Mus musculus 50 Csnk1g1 ENSMUSG00000032384 ENSMUST00000034949 3 1 2 90 9 65860588 65860606 GTGCATCTGCAATAACTCG 59 65860659 65867625 CGCTCTGATGATGTAGTCTG 59 NA Mus musculus 50 Tfdp2 ENSMUSG00000032411 ENSMUST00000034982 3 1 2 81 9 96195478 96195498 TACAATGAGGTAGCTGATGAG 59 96195539 96198058 TCTGATCATAAGCCGAATCAG 59 NA Mus musculus 50 Flcn ENSMUSG00000032633 ENSMUST00000102697,ENSMUST00000091246 1 2 2 80 11 59609359 59611568 CACATGAGACAGGTCTTGG 59 59609297 59609316 TTTCCAGATCACCTGATTCC 59 NA Mus musculus 50 Flcn ENSMUSG00000032633 ENSMUST00000102697,ENSMUST00000091246 3 2 2 93 11 59608702 59608720 AGTATGAGGAGGCCTATCG 59 59607891 59608645 ACGACAACTACGAACTCTG 59 NA Mus musculus 50 Trib3 ENSMUSG00000032715 ENSMUST00000040312,ENSMUST00000099213 2 2 2 74 2 152165451 152165469 TCTTCAGCAACTGTGAGAG 59 152164368 152164386 CATCTGATCCAGTCATCAC 57 NA DesignNoJunction Mus musculus 50 Psmf1 ENSMUSG00000032869 ENSMUST00000042452,ENSMUST00000109869 3 2 3 138 2 151561237 151561255 TCTGAAAGCTGTCTCTGTG 59 151555403 151559968 CTTATAGGTCCTGTGGAAGTC 59 NA Mus musculus 50 Ccdc85a ENSMUSG00000032878 ENSMUST00000042534,ENSMUST00000109502 1 2 4 110 11 28334149 28476400 GGCATGAATGAATCAACCT 58 28288925 28288943 ATCTCCAAGTTTCCTCCAC 58 NA Mus musculus 50 Nup93 ENSMUSG00000032939 ENSMUST00000079961,ENSMUST00000109547 3 2 2 80 8 96818939 96818957 AAGATTGTGAGTGGACACC 59 96819000 96820358 AGAAATGCTCTTGTCATCCA 59 NA Mus musculus 50 Bai3 ENSMUSG00000033569 ENSMUST00000115223,ENSMUST00000115225,ENSMUST00000041838 2 3 4 89 1 25513935 25517595 CACAACAGATTTACCCAGG 58 25513864 25513882 TTTGAAAGTCCATCATCCC 57 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111698,ENSMUST00000111690,ENSMUST00000099941,ENSMUST00000111693,ENSMUST00000111692,ENSMUST00000111688,ENSMUST00000111686,ENSMUST00000111691,ENSMUST00000111697,ENSMUST00000067232,ENSMUST00000066177,ENSMUST00000036811 2 12 23 81 2 84443860 84443878 AGACCACAACAGAACACTG 59 84443052 84443815 AATCTTCTGCATCAAGGGT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Igsf9b ENSMUSG00000034275 ENSMUST00000037531 2 1 3 123 9 27139390 27140097 GAAGAAAGATCCTCCGCTC 59 27140714 27140732 GTCGTCAGAGGATTCAGAC 59 NA Mus musculus 50 Fhod3 ENSMUSG00000034295 ENSMUST00000037097,ENSMUST00000115820 3 2 4 137 18 25181360 25181378 TCCAACCATAGACAAGCTG 59 25181477 25186583 CTGCTGAAATTGCTGTATCTG 59 NA Mus musculus 50 Rnps1 ENSMUSG00000034681 ENSMUST00000058094 2 1 3 114 17 24558777 24558817 TCACCAGGAATAACCACAG 58 24559170 24559188 CATAGCCTTTGGAGAGGTG 59 NA Mus musculus 50 Sema3f ENSMUSG00000034684 ENSMUST00000080560 3 1 2 130 9 107594599 107594617 GAGAGTGTGGTAACTTCGT 58 107592099 107594505 GAAGATGTAATCCTGTGCG 58 NA Mus musculus 50 D230004J03Rik ENSMUSG00000034832 ENSMUST00000089622,ENSMUST00000051321 3 2 2 129 6 83323321 83323790 CCTATCAGAACCAGGTGAC 59 83323210 83323228 TTATGTTGGTCCTTGTGGG 59 NA Mus musculus 50 Eef2k ENSMUSG00000035064 ENSMUST00000047875,ENSMUST00000106489,ENSMUST00000106488 3 3 5 114 7 128042957 128042975 GTACGATGGGATACAGGAC 58 128043050 128046806 GTACAAATCTCCTGATCTTTGG 58 NA Mus musculus 50 Cdh8 ENSMUSG00000036510 ENSMUST00000109461,ENSMUST00000067860,ENSMUST00000093249,ENSMUST00000109459 1 4 5 80 8 101714353 101720152 AAGACTGAGAAAGCCTCTG 58 101714291 101714309 GGGTCGATGTGGATATTGG 59 NA Mus musculus 50 Tmtc3 ENSMUSG00000036676 ENSMUST00000058154 2 1 2 85 10 99911513 99911534 CTTTAATCGAGCTTTGGAACTG 59 99910369 99911468 TAACTTCACCTGATTCCTGC 59 NA Mus musculus 50 Taf6 ENSMUSG00000036980 ENSMUST00000110936,ENSMUST00000048698 1 2 2 80 5 138623478 138623497 TTGCTTATCTACCTGATGCG 59 138623307 138623437 GAGCTCATGCACATATTTCTC 59 NA Nonspecific Mus musculus 50 Arid5a ENSMUSG00000037447 ENSMUST00000115032,ENSMUST00000097778,ENSMUST00000115030 1 3 8 80 1 36374104 36374124 TCTACAAGTTCATGAAGGAGC 59 36374165 36374469 TCTTCCACAGGTTAATCTGC 59 NA Mus musculus 50 Pank2 ENSMUSG00000037514 ENSMUST00000079386 3 1 4 175 2 131099701 131099724 TTGAACCTAAAGACAGCTG 57 131099863 131099881 GGAAAGCGTATAAAGTGCA 58 NA Mus musculus 50 D530005L17Rik ENSMUSG00000038070 ENSMUST00000047023,ENSMUST00000102819 3 2 3 86 4 84593473 84593491 AATCTGAAGCCAAAGACAG 57 84593541 84602192 GTACAGATTCAGTCTGCTC 57 NA Mus musculus 50 1810054D07Rik ENSMUSG00000038172 ENSMUST00000030205 1 1 3 80 4 82906837 82906855 AAGAAATGCACAGTTGTCG 58 82905360 82906795 GAGATCAGTTTCTTCACTCAG 58 NA Mus musculus 50 Trp53inp2 ENSMUSG00000038375 ENSMUST00000109676,ENSMUST00000043237 2 2 2 88 2 155211123 155211141 CTGAAGACTCCAACTGTCC 59 155211192 155211627 TGTATAGCTGTCCTGTAGGT 59 NA Mus musculus 50 Mesdc2 ENSMUSG00000038503 ENSMUST00000094215 3 1 1 127 7 91044254 91044272 CCAACTATGACGTTCAGAG 57 91046350 91046368 TAGAGTGACTTCAGCACAC 58 NA DesignNoJunction Mus musculus 50 Ensa ENSMUSG00000038619 ENSMUST00000058230,ENSMUST00000037983 1 2 2 106 3 95430721 95430739 GCTAAAGGCCAAATATCCA 57 95432475 95432493 TGTTGTAGTCTCCTGAGTC 57 NA DesignNoJunction Mus musculus 50 Sema6c ENSMUSG00000038777 ENSMUST00000090821,ENSMUST00000090823,ENSMUST00000079897 3 3 5 81 3 94972564 94972583 TTACAGAAGTCTTGGACCTC 58 94972626 94972747 ATAGACAAAGTGTGGCTCTC 59 NA Mus musculus 50 Agbl3 ENSMUSG00000038836 ENSMUST00000115017,ENSMUST00000090350 1 2 4 81 6 34743919 34743937 GACAGGCCTGGAAATAGAG 59 34743980 34748204 CTCTTTGTAAGCATCTTCAGC 59 NA Mus musculus 50 Garnl3 ENSMUSG00000038860 ENSMUST00000102810 3 1 4 87 2 32941449 32942604 AAGCTCTGTCTCAGAAGAC 58 32919584 32941398 ATCACTAGAGATGAGCAGC 58 NA Mus musculus 50 Rpl22l1 ENSMUSG00000039221 ENSMUST00000043867 1 1 1 261 3 28705663 28705681 AGTTTCTACGGGAGAAGGT 59 28706233 28706252 TAGTCCTCAGACTCTGAACC 59 NA DesignNoJunction Mus musculus 50 Zdhhc2 ENSMUSG00000039470 ENSMUST00000049389,ENSMUST00000110479 2 2 2 111 8 41541390 41541408 CGATATTGTGACAGATGCC 58 41542045 41547455 CACAATTGTTCACCCATGG 59 NA Mus musculus 50 Prrx2 ENSMUSG00000039476 ENSMUST00000113592,ENSMUST00000041659 1 2 2 134 2 30735157 30735175 ATTATCTATCCTGGCCAGC 58 30736397 30736415 TGAACTCTTTGGCCTTGAG 59 NA DesignNoJunction Mus musculus 50 AA536717 ENSMUSG00000039599 ENSMUST00000090499,ENSMUST00000090503 3 2 5 99 14 21194828 21197009 AAGCTCCTAGATCTTGATGAC 59 21197070 21197088 ATGTACTAAGCTCCATGGC 59 NA Mus musculus 50 Ccbl1 ENSMUSG00000039648 ENSMUST00000113664,ENSMUST00000113659 1 2 8 128 2 30047545 30047564 TATGATGTCGTGAACTTGGG 59 30043651 30047454 GATGATGACAAACGCTGAG 58 NA Mus musculus 50 Ccbl1 ENSMUSG00000039648 ENSMUST00000113664,ENSMUST00000113659 3 2 8 136 2 30047554 30047572 CCAAGGAGTATGATGTCGT 58 30043651 30047454 GATGATGACAAACGCTGAG 58 NA Mus musculus 50 Sdk1 ENSMUSG00000039683 ENSMUST00000085774,ENSMUST00000110794 3 2 3 92 5 142089112 142089131 AACTTACTGCCTATCGTCAG 59 142089186 142268891 TGTGATGGCTATTCTGCTG 59 NA Mus musculus 50 Arntl2 ENSMUSG00000040187 ENSMUST00000111638 2 1 4 104 6 146771123 146771141 TTTAGGATACCTGCCTCAG 58 146771208 146771655 TTGTATGAGTCTGCTTTGTG 58 NA Mus musculus 50 Ddx58 ENSMUSG00000040296 ENSMUST00000037907,ENSMUST00000108111 3 2 2 80 4 40160808 40160828 AAGAGTACCACTTAAAGCCAG 59 40158658 40160767 TCCATTTCTTCAGAGCATCC 59 NA Mus musculus 50 Bptf ENSMUSG00000040481 ENSMUST00000106763,ENSMUST00000106762,ENSMUST00000057892,ENSMUST00000041145 3 4 4 90 11 106928561 106929598 ACACGGACAGAAACATCTG 59 106928489 106928508 AATACTCAGAACGAATGCCA 59 NA Mus musculus 50 Adam22 ENSMUSG00000040537 ENSMUST00000088762,ENSMUST00000088747,ENSMUST00000078296 3 3 13 158 5 8082266 8086608 ACATCAACAAGACAGGACC 59 8078687 8082146 TAAATGGATGTCTCCCATAGC 59 NA Mus musculus 50 Phc1 ENSMUSG00000040669 ENSMUST00000079560,ENSMUST00000081849 2 2 3 89 6 122270327 122270963 CTCTGTAGAGTTAGAGAAGAAGG 59 122270260 122270279 CTCTTAGAGCCTCGAAACTG 59 NA Mus musculus 50 Gpr161 ENSMUSG00000040836 ENSMUST00000043164,ENSMUST00000111450 1 2 2 112 1 167241117 167247381 GATCACAGACTTGGGTCTG 59 167247456 167247475 CTGAATCCTGAGAGTAGCTG 59 NA InUTR Mus musculus 50 Rcc2 ENSMUSG00000040945 ENSMUST00000071169,ENSMUST00000038893 3 2 2 83 4 140268582 140269326 CTGCTCAGATAATGTACAACG 58 140269370 140269389 TTCCTTTACAGTCCATCAGC 59 NA Mus musculus 50 Rbbp8 ENSMUSG00000041238 ENSMUST00000047322,ENSMUST00000115861 2 2 2 81 18 11819443 11831101 AGTGCAAGGTTTACAAGTC 57 11836113 11836134 GGTGAAGAATTCTTCTAGTCTC 57 NA Mus musculus 50 Gcn1l1 ENSMUSG00000041638 ENSMUST00000064454 3 1 2 91 5 116029704 116029805 TACTTGCTGGACAACTGTG 59 116029860 116029878 AGCAAGGACTTCTGTATGG 58 NA Mus musculus 50 Sp9 ENSMUSG00000041762 ENSMUST00000112043,ENSMUST00000076463,ENSMUST00000112042,ENSMUST00000048504 1 4 6 85 2 73206426 73206447 CCCTGTCTATTCTTCTCTTGAG 59 73205647 73206382 AACAATAGTCTGAGCGATGAG 59 NA Mus musculus 50 2310008H04Rik ENSMUSG00000041974 ENSMUST00000040248,ENSMUST00000115757 2 2 2 80 16 15912806 15912824 GAAGACCACATTTCCAAGC 59 15912654 15912764 TGTACTGCACTCATTAGTCTG 59 NA Mus musculus 50 D330038O06Rik ENSMUSG00000043090 ENSMUST00000039786,ENSMUST00000110201,ENSMUST00000098687,ENSMUST00000110197,ENSMUST00000039427 3 5 5 81 8 72290670 72291545 GGAAGAATTCAAAGGCATGTC 59 72290609 72290628 AATCGTATGGCTTGTTTCCA 59 NA Mus musculus 50 4932442L08Rik ENSMUSG00000043549 ENSMUST00000044989,ENSMUST00000113902 3 2 3 159 X 91602682 91604336 ACTAAAGCCGTCAACATCC 59 91602541 91602559 TTTGTCAGACGAAGTGTCC 59 NA InUTR Mus musculus 50 Klhl15 ENSMUSG00000043929 ENSMUST00000096369,ENSMUST00000113911,ENSMUST00000113915 1 3 5 91 X 91487327 91497765 GTTCATTTGTGATTCATGGC 57 91497819 91497837 TCATACAGTGCTCTGAACC 58 NA InUTR Mus musculus 50 Tmem20 ENSMUSG00000044026 ENSMUST00000054098 3 1 1 95 19 38475032 38475050 ATGCTGTAGAGATCAGTGC 59 38477134 38477152 CTTTGGGACCTATGAACCC 59 NA DesignNoJunction Mus musculus 50 Zfp295 ENSMUSG00000046962 ENSMUST00000113734,ENSMUST00000052089 3 2 3 154 16 98174248 98177930 CTTGCCAGATAAAGTGCAG 58 98174112 98174132 CTTATGAGCTCGGAATTTCTG 58 NA Mus musculus 50 Tmem164 ENSMUSG00000047045 ENSMUST00000112891,ENSMUST00000112892 2 2 9 145 X 139186622 139205520 GTCATCTTCAAGTTACAGATGC 59 139267093 139267111 AAAGAACATGAGGCCAGTC 59 NA Mus musculus 50 Cltc ENSMUSG00000047126 ENSMUST00000060766 1 1 3 83 11 86547341 86550574 AGGTATAAAGGATTCTGGCA 58 86547277 86547295 TCATCAGTCATGGTATGGG 58 NA Mus musculus 50 1700001C19Rik ENSMUSG00000047150 ENSMUST00000061885,ENSMUST00000073143 1 2 2 60 17 47550611 47550630 CTAAATCCCTTCTACACCCT 58 47550570 47550588 CGGTTTCTCTTTGGTACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC048546 ENSMUSG00000047228 ENSMUST00000116526,ENSMUST00000060574 1 2 2 61 6 128492857 128492875 ACGTTCTGTTCTACTTGGA 58 128491083 128491101 TTCAATGGAGAAGGTGAGG 58 NA DesignNoJunction Mus musculus 50 Fbxw10 ENSMUSG00000047821 ENSMUST00000072639,ENSMUST00000055006,ENSMUST00000108703 2 3 4 60 11 62650781 62650800 AAGTATAGGACCTCGAAACC 58 62650820 62653902 CACAGGCATATTGAAGAAACTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Bri3 ENSMUSG00000047843 ENSMUST00000056578 1 1 2 206 5 145016707 145016725 TAACATCCACAGTCGAACG 59 145024991 145025009 TAAGTAAAGACCGCTCCAC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Stx19 ENSMUSG00000047854 ENSMUST00000055557 3 1 1 60 16 62821842 62821861 ATGTTCAACGATTTGGACAG 58 62821883 62821902 AGACTAAACCTTCTCATGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000047923 ENSMUSG00000047923 ENSMUST00000051692 3 1 1 65 2 91786090 91786108 CATACAGACTGGGAGTGTC 59 91786137 91786155 TTCTTTGCTTATGGGACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Entpd1 ENSMUSG00000048120 ENSMUST00000112231,ENSMUST00000052414 1 2 2 80 19 40800741 40801789 ACATTCAGGTTTCAAGTGGT 59 40801831 40801850 GCTCACTTACATTCACAACC 59 NA Mus musculus 50 1110007A13Rik ENSMUSG00000048170 ENSMUST00000057557 2 1 1 80 7 135848037 135848055 CCAACAATACTTCCCTGGT 59 135847125 135847995 CAGTTACGTTATGAACACCTG 58 NA Mus musculus 50 EG665044 ENSMUSG00000048484 ENSMUST00000058918 3 1 1 265 8 4677874 4677893 TTGAACCATAACTTTCTGCG 58 4677628 4677646 AGACAGTGATTCCGTTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Thnsl1 ENSMUSG00000048550 ENSMUST00000102952,ENSMUST00000102951 1 2 4 96 2 21131660 21134598 AGCTTGCTTGAAACTTTGG 59 21134658 21134676 TGGTTCTGATTAGAGGCAC 58 NA InUTR Mus musculus 50 Gpr23 ENSMUSG00000049929 ENSMUST00000060576 2 1 1 145 X 104119479 104119498 AGATAAATCTGGTGCCAGAG 59 104125553 104125574 GTCAATAAATCTTCTGTCACCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Il17d ENSMUSG00000050222 ENSMUST00000089494,ENSMUST00000089492 1 2 2 202 14 58144432 58161184 TACAGGATTTCCTACGACC 58 58161350 58161368 ATGGTGATGTAGTGTTCGG 59 NA DesignNoJunction Mus musculus 50 Sox6 ENSMUSG00000051910 ENSMUST00000072804 1 1 2 94 7 122722597 122722615 TAAAGGGCATAAGTGACCG 59 122693665 122722540 ATAGAGCTGCTCAATCTGTC 59 NA Mus musculus 50 Nup188 ENSMUSG00000052533 ENSMUST00000064447,ENSMUST00000113626 1 2 3 80 2 30180800 30180818 TGTTGAAGGAGATGCTTCC 59 30180860 30181004 GAATTAGGCAACCTATCAGCT 59 NA InUTR Mus musculus 50 Ccdc79 ENSMUSG00000052616 ENSMUST00000064576,ENSMUST00000109440 2 2 3 87 8 106976670 106992641 ATATACGTGCTCAGGTTGC 59 106976601 106976619 ACACTGGTATGCACATGAG 59 NA Mus musculus 50 Grk4 ENSMUSG00000052783 ENSMUST00000001112,ENSMUST00000074651,ENSMUST00000114320 1 3 3 102 5 35017209 35017227 AAACAGCCAATTGGAAGAC 58 35017293 35018774 TAACTTCGTACTCTGCCAC 59 NA Mus musculus 50 Dspp ENSMUSG00000053268 ENSMUST00000112771,ENSMUST00000065590 2 2 2 85 5 104603926 104603944 AGTACCACTGGAAAGAGAC 58 104603993 104604165 ATAACTCATTCTGTGCTGC 57 NA Mus musculus 50 EG433873 ENSMUSG00000053337 ENSMUST00000065707 3 1 1 61 5 33973520 33973538 TTCTCAAATCACCACGGTC 59 33973560 33973581 CGTATGTAACTTAATCAGCTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ebf4 ENSMUSG00000053552 ENSMUST00000110288,ENSMUST00000110287,ENSMUST00000110286,ENSMUST00000066048,ENSMUST00000110283 1 5 5 84 2 130132593 130132748 TAATAATGGACTTCGGACAGAG 59 130134289 130134309 CTGTCCCTCATAGATGATAGC 59 NA Mus musculus 50 Gon4l ENSMUSG00000054199 ENSMUST00000107498,ENSMUST00000081695 2 2 4 91 3 88672737 88672755 GAGGATTTCCGTACTGACC 59 88673760 88679842 ACTACAGATTGCACAGTCTC 59 NA Mus musculus 50 Fsd1l ENSMUSG00000054752 ENSMUST00000059942 1 1 2 80 4 53668621 53672390 ACAGATCAAGGATAGAGTCAC 58 53672432 53672450 AAATGGGTCATGTTGTCAC 58 NA Mus musculus 50 Eef1d ENSMUSG00000055762 ENSMUST00000109972,ENSMUST00000089681,ENSMUST00000089680,ENSMUST00000073802,ENSMUST00000023235,ENSMUST00000109976,ENSMUST00000116440,ENSMUST00000109975 3 8 9 130 15 75726770 75726788 AAGAAGATAAGGAGGCTGC 59 75726342 75726676 AGTCTCATCATCCCAAGGT 59 NA DesignRelaxed Mus musculus 50 OTTMUSG00000002038 ENSMUSG00000056008 ENSMUST00000069852 3 1 1 60 11 94557033 94557051 TGAACTCTACTTCACTCGT 57 94556991 94557010 CACTGAGGATAGTAAGACCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Centa1 ENSMUSG00000056413 ENSMUST00000110865 1 1 3 116 5 139783778 139783796 TGTTCATCTGTTTGAGCTG 57 139778334 139783698 CATGAGATGCCATGAACTC 58 NA Mus musculus 50 Lepr ENSMUSG00000057722 ENSMUST00000102777,ENSMUST00000037552,ENSMUST00000106921,ENSMUST00000084387 3 4 4 81 4 101406194 101408175 CCAGCTAGGTGTAAACTGG 59 101408219 101408238 AGGTAATGGCTCCATATGAC 58 NA Mus musculus 50 Cyb5d2 ENSMUSG00000057778 ENSMUST00000087640,ENSMUST00000079681 3 2 2 97 11 72596328 72602591 TATGTATTTGTCGGAAGACTGG 59 72596252 72596270 ATGCCTTTAGTCACCATGG 59 NA Mus musculus 50 Camk2b ENSMUSG00000057897 ENSMUST00000066431 3 1 10 81 11 5879716 5882733 TGGAGTCAAGGAATCTTCC 58 5872869 5872888 CTTGATGATTTCCTGCTTCC 58 NA Mus musculus 50 EG381438 ENSMUSG00000058174 ENSMUST00000079755,ENSMUST00000108106,ENSMUST00000108105,ENSMUST00000099128 1 4 4 60 3 37613626 37613644 CCCAAGAGAAAGCATTCCA 59 37613584 37613602 GTATACTGGCAGATGGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pde1a ENSMUSG00000059173 ENSMUST00000102654,ENSMUST00000102655,ENSMUST00000102653 3 3 7 89 2 79767892 79767910 ATGTCAACGTTGTTGACCT 59 79746319 79767839 CCAGCAGTCTTCTTGTCTC 59 NA Mus musculus 50 Mbtd1 ENSMUSG00000059474 ENSMUST00000063645 2 1 7 169 11 93787631 93790936 CATTAGAAAGGTGCTGGCT 59 93791069 93791087 AGAATGGAGTACCTCTGGG 59 NA Mus musculus 50 Dsc3 ENSMUSG00000059898 ENSMUST00000115847 2 1 3 81 18 20124179 20124197 ATGGATACTGACAACTGCA 58 20122180 20124135 CTCTAATGGAGTCTTCACCA 58 NA Mus musculus 50 8430427H17Rik ENSMUSG00000061411 ENSMUST00000035346 2 1 2 162 2 153303624 153303643 AGGATGCACTTTAACTCCAG 59 153262068 153296426 TCACAGACGTTTCATCCTG 59 NA Mus musculus 50 Dlgap4 ENSMUSG00000061689 ENSMUST00000000094,ENSMUST00000070782,ENSMUST00000109568,ENSMUST00000109567 3 4 6 86 2 156536990 156571581 GCTTCCAAGTTCATCATGC 59 156571631 156571649 ACTGAGATGAACGGTTTCG 59 NA Mus musculus 50 Dlgap4 ENSMUSG00000061689 ENSMUST00000000094,ENSMUST00000070782,ENSMUST00000109568,ENSMUST00000109567 1 4 6 81 2 156536990 156571581 GCTTCCAAGTTCATCATGC 59 156571626 156571644 GATGAACGGTTTCGATGTG 59 NA Mus musculus 50 Krr1 ENSMUSG00000063334 ENSMUST00000075924 3 1 2 91 10 111420036 111420054 CTCTTACAAAGAGGCAGGA 58 111420109 111421608 AGTTTCGGTAGAAGCTTCC 59 NA Mus musculus 50 Eno1 ENSMUSG00000063524 ENSMUST00000080926 3 1 3 82 4 149616277 149618119 TCTGGTTAGCAAGAAAGTG 57 149618165 149618183 ATTTATTCTCTGTGCCGTC 57 NA Nonspecific Mus musculus 50 Tnfsf18 ENSMUSG00000066755 ENSMUST00000086084 1 1 1 125 1 163424952 163424973 GGTACACTGATCTATACTTCAC 57 163433628 163433647 ATCAGATGTCGTATTCACAC 57 NA DesignNoJunction Mus musculus 50 Dcpp2 ENSMUSG00000067843 ENSMUST00000088598,ENSMUST00000088594 3 2 2 132 17 24036366 24037366 TGATTGTTGGAATTCAGCTC 58 24037460 24037479 GGATTATATGTGCCTTCGAC 58 NA Mus musculus 50 4930519N13Rik ENSMUSG00000068115 ENSMUST00000089169 2 1 5 85 2 150765703 150775383 ACAGATGCTGGAGAAACAG 59 150765636 150765656 GTCTTAAGTACTGGCATTCCT 59 NA Mus musculus 50 Macrod2 ENSMUSG00000068205 ENSMUST00000110062,ENSMUST00000110072,ENSMUST00000043836,ENSMUST00000110061 1 4 10 92 2 140226707 140244563 AAATGATGGATGCATCCCT 59 140244619 140244637 TTTCCATAACCGTCTCAGG 58 NA InUTR Mus musculus 50 Epc2 ENSMUSG00000069495 ENSMUST00000102770 3 1 2 127 2 49385656 49390785 AAACTAAGGTGCTGTCTCC 59 49392104 49392125 CATATGGTTATTAGCTTGGTCC 58 NA Mus musculus 50 Art5 ENSMUSG00000070424 ENSMUST00000106938 2 1 7 169 7 109248152 109248356 AACTTCTTCCAGGCTTCAC 59 109248001 109248020 GAATCATCCTAGGACGAGTC 59 NA InUTR Mus musculus 50 Wfdc10 ENSMUSG00000070529 ENSMUST00000109334,ENSMUST00000094344 2 2 2 60 2 164482695 164482714 TGAACCTGTTGGATAAAGAC 57 164482736 164482755 TAGACATAGTCAGAGGGAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_796335.1 ENSMUSG00000073811 ENSMUST00000097990 2 1 2 126 4 88248747 88248766 GATCACTGTGTACCTGAGAG 59 88248190 88248658 TGCTTGTTCCTTCTCACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2810426N06Rik ENSMUSG00000074165 ENSMUST00000098508 1 1 3 81 7 48898795 48902872 CTGTCGAGGATTTAGTTGTC 57 48902916 48902934 TTCTGAGAAGAATCCAGCA 58 NA Mus musculus 50 Foxr1 ENSMUSG00000074397 ENSMUST00000114742 1 1 2 81 9 44242102 44243519 TACAGTTTCACTCGAGAGC 59 44242039 44242057 AACTGAGATTGTGACGGAC 59 NA Mus musculus 50 Gm826 ENSMUSG00000074623 ENSMUST00000109474,ENSMUST00000099127 2 2 3 91 2 160152854 160152872 TGGTCAAGAAACGACAGAG 59 160137784 160137803 CTCCAGAAATTCCTCAGGAC 59 NA DesignNoJunction, InUTR Mus musculus 50 Gm1587 ENSMUSG00000075512 ENSMUST00000100372 3 1 1 88 14 78196802 78196820 AAGGATGGAAACAGCAGAG 59 78194800 78194818 GGAAGAGCTTCATTGACCA 59 NA DesignNoJunction Mus musculus 50 Ywhaq ENSMUSG00000076432 ENSMUST00000110976,ENSMUST00000049531 2 2 3 63 12 21422692 21422710 CTATCGGGAGAAAGTGGAG 58 21404214 21422665 ATCCAACAATTCCAGGACC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 TRAV8D-2 ENSMUSG00000076821 ENSMUST00000103632 2 1 1 63 14 53965904 53965923 TACACAACTGTTGTTCAGTG 58 53965949 53965967 TTAAGATTAGCTGGGCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV6-6 ENSMUSG00000076835 ENSMUST00000103647 1 1 1 60 14 54136897 54136916 TCCTCCTGAAAGTCATTACG 59 54136939 54136957 TATGTGGCTTCAAACCCTC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 3100002L24Rik ENSMUSG00000078903 ENSMUST00000109061,ENSMUST00000109060,ENSMUST00000109058,ENSMUST00000109056 3 4 10 93 2 175023312 175023331 CCTATAGGAATCTCACAGCT 57 175021880 175023055 CTTTCATGCCTTCCATGAC 58 NA Nonspecific Mus musculus 50 Sec61g ENSMUSG00000078974 ENSMUST00000109643,ENSMUST00000109642,ENSMUST00000109641 2 3 3 71 11 16401800 16404746 ATTATTGTGGGTGGCTGAG 59 16401747 16401765 TTACTTCATGCCCTTTCCC 59 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 A2AMP4_MOUSE ENSMUSG00000079483 ENSMUST00000113635 3 1 2 138 X 99045165 99045184 GAGGATGATGAAGAATTGCT 57 99271530 99271548 TGTTAAACAACGAGTGTCG 58 NA DesignNoJunction Mus musculus 50 Rbm35b ENSMUSG00000079864 ENSMUST00000115978,ENSMUST00000115979 2 2 2 60 8 108658164 108658183 AGTGAAGACTATGGTAGCTG 58 108657904 108658141 GAACAACTGACCATTGGAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 NM_001105180.1 ENSMUSG00000080150 ENSMUST00000116296 1 1 1 60 7 92095475 92095493 TCATCCTCTCCTAAGTGAC 57 92095433 92095451 GTTCTTTGGAGACATCTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-483 ENSMUSG00000070140 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Pbsn ENSMUSG00000000003 ENSMUST00000000003,ENSMUST00000114041 1 2 2 85 X 75087856 75087874 TACAGCGTATCATGGACAC 59 75083441 75087207 GTCATCTGTAATGCTAATCCTG 58 NA InUTR Mus musculus 50 Gna12 ENSMUSG00000000149 ENSMUST00000000153 1 1 1 254 5 141305952 141305970 CCATCTTCGACAACATCCT 59 141238579 141261353 ACTTCACTGATTCACCCAG 59 NA DesignRelaxed Mus musculus 50 Acvr1b ENSMUSG00000000532 ENSMUST00000000544 1 1 1 80 15 101034995 101039515 ATGCAATTCTGGAGGAGTC 59 101039559 101039577 ATCTCCTCAATGGAAGGGT 59 NA Mus musculus 50 Cd52 ENSMUSG00000000682 ENSMUST00000105881 1 1 2 115 4 133638627 133650859 TTGTGATTCAGCACTCTGG 59 133638530 133638548 TTTCCTTTGAGGATGACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Snrpn ENSMUSG00000000948 ENSMUST00000059305 2 1 1 102 7 67130857 67131665 CTAAAGATACTGGCATTGCTC 58 67130775 67130793 GGAATAGGTACACCTGCTG 59 NA Mus musculus 50 Itgb7 ENSMUSG00000001281 ENSMUST00000001327 2 1 1 80 15 102049744 102052531 GATGCTTATGATAGCCTGTC 57 102049683 102049701 AGATTCAAAGGAGATGCTG 57 NA Mus musculus 50 Marveld3 ENSMUSG00000001672 ENSMUST00000001722 3 1 2 89 8 112483666 112483686 AGAGGAATATTACCAGTCGGA 59 112472547 112483615 ATTATCTGCACCACACCTC 59 NA Mus musculus 50 1810034K20Rik ENSMUSG00000002329 ENSMUST00000002400 1 1 1 95 14 56278887 56278905 GAACATCCAATTGTACCCG 58 56278300 56278828 TGTATCTCACTTGTCCGAG 58 NA Mus musculus 50 Lcp2 ENSMUSG00000002699 ENSMUST00000052413,ENSMUST00000109329 1 2 2 80 11 33968955 33969872 TTCTTGAGGAGACAGAAAGC 59 33970976 33970997 CATCATTGGGACTTTCATAGTC 58 NA Mus musculus 50 Cd97 ENSMUSG00000002885 ENSMUST00000075843,ENSMUST00000109802,ENSMUST00000002964 3 3 3 85 8 86251700 86251719 CAATTCTGTCTTCCTGACCA 59 86249919 86251655 TTGACTCCACAGAAGTAAAGTC 59 NA Mus musculus 50 Prkar2b ENSMUSG00000002997 ENSMUST00000003079,ENSMUST00000036497 1 2 2 80 12 32657065 32660798 TTACGTCATTGACAGAGGA 57 32657003 32657022 CGGTTATCATAGTTACCGAC 57 NA Mus musculus 50 Aven ENSMUSG00000003604 ENSMUST00000003705,ENSMUST00000099588 1 2 2 108 2 112467994 112469907 TGATCCAGACCACAATTCC 59 112469979 112469997 GATCTGAGCTCAGAGATGG 58 NA Mus musculus 50 Stxbp2 ENSMUSG00000004626 ENSMUST00000004745 3 1 1 81 8 3635676 3635695 CCACTATTACACGAACTCAC 57 3635738 3635842 TGGTCTCATACCTGTATGTG 58 NA Mus musculus 50 Rab23 ENSMUSG00000004768 ENSMUST00000088287,ENSMUST00000115174 2 2 2 81 1 33780840 33781786 CGACAGATTCAGGTTAACG 58 33781831 33781849 TCGTGATTGCATCAAACTC 58 NA Mus musculus 50 Atp4a ENSMUSG00000005553 ENSMUST00000005692 3 1 1 81 7 31498297 31500000 TGATGATAATCTGTACCTGGC 59 31500042 31500061 CTTGAACTCCTGGTAGTAGC 59 NA Mus musculus 50 Bcas2 ENSMUSG00000005687 ENSMUST00000005830 1 1 1 80 3 102981331 102982284 AATGGAGTCAAACTGGGTG 59 102982328 102982346 TAGATCTCGTTCTCCAGCT 59 NA Mus musculus 50 Apc ENSMUSG00000005871 ENSMUST00000079362,ENSMUST00000115781 3 2 3 80 18 34470496 34470514 TATTGAAAGTGGAGGTGGG 58 34470557 34471673 TCTCTTAGGATTTGCCTGTG 59 NA Mus musculus 50 Epor ENSMUSG00000006235 ENSMUST00000006397 3 1 1 126 9 21766041 21766144 AATGAAGTAGTGCTCCTGG 58 21765933 21765951 CTTCATATCGGATGTGGGT 58 NA Mus musculus 50 Gabpa ENSMUSG00000008976 ENSMUST00000114184,ENSMUST00000009120 1 2 2 80 16 84841704 84844530 CTGCAAGATATTCAGCTGG 58 84844573 84844592 TACACTAAGCTGTACAGTCC 58 NA Mus musculus 50 Tnpo1 ENSMUSG00000009470 ENSMUST00000109401,ENSMUST00000040075,ENSMUST00000099273,ENSMUST00000109399 2 4 4 164 13 99623441 99625106 CTTGTATAGCTGATTTCATGCC 59 99622849 99622868 TAATGATCTCCACAAGCTGG 59 NA Mus musculus 50 Hyal2 ENSMUSG00000010047 ENSMUST00000010191 1 1 1 141 9 107473275 107473294 CAACTTTGTCAGTTTCCGTG 59 107473398 107473837 AGAGATAAGGTCCACCTGG 59 NA Mus musculus 50 Ebf3 ENSMUSG00000010476 ENSMUST00000106118,ENSMUST00000033378 2 2 2 80 7 144397920 144397939 ATAGATTACGGCTTCCAGAG 58 144392866 144397878 TAACACTTCCTTGGGTAACC 59 NA Mus musculus 50 Zfp296 ENSMUSG00000011267 ENSMUST00000108453,ENSMUST00000011411,ENSMUST00000116346 3 3 3 60 7 20163304 20164975 TCTCAGAATCCAAAGAGCTG 59 20164998 20165016 CTAGTGTACTGTCTGCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Amotl1 ENSMUSG00000013076 ENSMUST00000013220 1 1 1 80 9 14354889 14354907 AGACTTCTCTTACCAGCAG 58 14353242 14354845 GCAGGAATCCTATACTCCC 58 NA Mus musculus 50 Surf2 ENSMUSG00000014873 ENSMUST00000015017 1 1 1 81 2 26774562 26774716 AGACCTATACCCACCTGAG 59 26774760 26774779 TGTCAGAAAGTCTTCAGGAG 58 NA Mus musculus 50 Lage3 ENSMUSG00000015289 ENSMUST00000114153,ENSMUST00000114152,ENSMUST00000015433 3 3 3 77 X 71598331 71598671 CACAGATTCTCCCTCTTCG 59 71598272 71598290 GACATCTGGAACTAGGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mocs2 ENSMUSG00000015536 ENSMUST00000015680,ENSMUST00000050131 1 2 2 100 13 115614814 115614832 AATACAGTTCACTGCCGAG 59 115614893 115615430 TTCTTGTAGTCCCTACAAAGAG 59 NA Mus musculus 50 Nat9 ENSMUSG00000015542 ENSMUST00000103041,ENSMUST00000103039,ENSMUST00000103038,ENSMUST00000103040 3 4 4 162 11 115045934 115046333 GAAGATGAAGACAAGTGCAC 59 115044993 115045809 TAGGCTCTGCAATCATGAC 59 NA Mus musculus 50 Wfdc15b ENSMUSG00000018211 ENSMUST00000018355,ENSMUST00000109376 2 2 2 95 2 164040917 164040935 GTGATAAAGGCTGCAAGGA 59 164040321 164040858 TCCGGTTTGTCTATTCTGG 58 NA InUTR Mus musculus 50 Ncor1 ENSMUSG00000018501 ENSMUST00000018645,ENSMUST00000101069,ENSMUST00000108708,ENSMUST00000101066,ENSMUST00000037575,ENSMUST00000101067 2 6 8 80 11 62154121 62156506 TTCTGATGTTTCTTCCAGC 57 62154059 62154079 GCTGGTATACTTTCTCTTTGG 58 NA Mus musculus 50 Trim37 ENSMUSG00000018548 ENSMUST00000041282,ENSMUST00000092807,ENSMUST00000092808 1 3 3 80 11 86962851 86973326 GAGGTAGAACATCAGTTGC 57 86973370 86973388 TTGCTGGAACATCATTAGG 57 NA Mus musculus 50 Tnfsf12 ENSMUSG00000018752 ENSMUST00000094070,ENSMUST00000108650,ENSMUST00000108648,ENSMUST00000018896 1 4 5 80 11 69497398 69497418 TCCGATGTATCAGAAGTATGC 59 69496829 69497359 GATGTAAATGAAAGACACCTGC 59 NA Nonspecific Mus musculus 50 Tmem129 ENSMUSG00000019295 ENSMUST00000019439 1 1 1 87 5 33998031 33998050 CAGACTCAAACCTACCTGTG 59 33997513 33997984 GAATTCAGCCGAATATCAAAGG 59 NA Mus musculus 50 Ffar3 ENSMUSG00000019429 ENSMUST00000094583 3 1 1 60 7 31640360 31640378 CCTGTACGACTAGAGATGG 58 31640318 31640337 AGTAACTCGTGATACACAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Trmt11 ENSMUSG00000019792 ENSMUST00000019927,ENSMUST00000116254 1 2 2 80 10 30279038 30280638 CAATCATCACAGATCCTCCA 59 30278977 30278997 CTATTCCCTTTGGTATGTCCT 58 NA Mus musculus 50 Mypn ENSMUSG00000020067 ENSMUST00000095580 3 1 1 84 10 62632168 62655143 CCAAGTAAGGTGGTATTGTG 58 62632103 62632121 CAGTGAGTGAAGGTTTCCT 59 NA Mus musculus 50 6230410P16Rik ENSMUSG00000020258 ENSMUST00000112543 2 1 2 75 9 106059617 106059827 GGAAAGAAAGAGATGCTGC 58 106059560 106059578 GATCCGGTAAGTTGTCCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Stk10 ENSMUSG00000020272 ENSMUST00000102821 3 1 1 83 11 32514700 32515786 AGAAGATCAAGCAGTTCTCC 59 32515832 32515850 TCTGGTTCTCGTGTTTCTG 59 NA Mus musculus 50 Rab10 ENSMUSG00000020671 ENSMUST00000021001 2 1 1 81 12 3256914 3256932 GTGTATGACATCACCAACG 58 3253343 3256869 CATCTTCATTGGCATGCTC 59 NA Mus musculus 50 Coro6 ENSMUSG00000020836 ENSMUST00000102493,ENSMUST00000108390,ENSMUST00000021190,ENSMUST00000052515,ENSMUST00000108391 2 5 6 300 11 77279935 77279953 TCATCATCTGGAATGTGGG 59 77280841 77281781 TCTTCGAAATTGTTCGGGT 59 NA DesignRelaxed Mus musculus 50 Dvl2 ENSMUSG00000020888 ENSMUST00000102575,ENSMUST00000019362 1 2 2 80 11 69821891 69821912 CCGTCAACAAGATTACTTTCTC 59 69821951 69822287 TAACTAGGTAACTCTCACAGC 58 NA Mus musculus 50 Pfas ENSMUSG00000020899 ENSMUST00000021282,ENSMUST00000108668 2 2 2 81 11 68805238 68805256 TCAGCATATGCTGTCTGTC 59 68804984 68805193 AAAGCAAATGACCTTTCCC 58 NA Mus musculus 50 Map3k14 ENSMUSG00000020941 ENSMUST00000021324,ENSMUST00000100354 2 2 2 204 11 103102404 103103432 GAATGTGAGAATAGCCAAGAG 58 103082010 103101044 ACTTCGACCTCTTCTTCCT 59 NA DesignNoJunction Mus musculus 50 Clmn ENSMUSG00000021097 ENSMUST00000109937 2 1 3 138 12 106012050 106012713 AGGTCTTTGGAATTGGACC 59 106011432 106011450 CTCTGATGCCGTAGAACTG 59 NA Mus musculus 50 4933426M11Rik ENSMUSG00000021133 ENSMUST00000085243,ENSMUST00000068519 3 2 2 92 12 81969531 81969551 TGAAGGGTGACTACAAATACC 59 81969602 81971073 GGGTTTCTTTGTCTTCAATGAG 59 NA Mus musculus 50 Tcfap2a ENSMUSG00000021359 ENSMUST00000021787,ENSMUST00000080429,ENSMUST00000110193,ENSMUST00000110192 3 4 4 88 13 40814696 40816649 CACTAGTGGAAGGAGAAGC 59 40814626 40814645 AAATTCTGCTACTGCTTTGG 58 NA Mus musculus 50 Nedd9 ENSMUSG00000021365 ENSMUST00000021794 3 1 1 110 13 41521305 41521324 TATGACAAGGAGGAAACAGG 59 41434374 41521232 CCCTTGCCATAAGATTCCT 59 NA InUTR Mus musculus 50 Spata9 ENSMUSG00000021590 ENSMUST00000022081,ENSMUST00000022080 1 2 2 188 13 76105330 76105508 TTCTCTGGAAGACTTGAGG 58 76115066 76115084 TAACCCTTGAATGAGCGTC 59 NA DesignNoJunction Mus musculus 50 Srd5a1 ENSMUSG00000021594 ENSMUST00000091514 3 1 2 237 13 69733849 69733870 GGTGATAAATATCCACTCAGAC 58 69714065 69725471 GAGGTACCACTGATGATGC 59 NA DesignRelaxed Mus musculus 50 4930452B06Rik ENSMUSG00000021747 ENSMUST00000102996 2 1 1 80 14 9369158 9390557 GATAAAGATGATGAACCCACAG 58 9369099 9369118 TAGCAGCTGTGTAACATGAG 59 NA Mus musculus 50 Ebpl ENSMUSG00000021928 ENSMUST00000022494 1 1 1 85 14 61960976 61960994 TGACTGTTGTCCTAGATGG 58 61960226 61960927 AATCTGTACAAAGTGCCTG 57 NA Mus musculus 50 Lats2 ENSMUSG00000021959 ENSMUST00000038381 2 1 3 81 14 58341587 58341608 GTCTTCATAAGGAAGGTATCAG 57 58341379 58341545 GAATATGCATTGTTGACCG 57 NA Mus musculus 50 Ppp2r2a ENSMUSG00000022052 ENSMUST00000089230 1 1 1 81 14 67641159 67641180 GACTAGAGACTATTTGTCAGTC 57 67638633 67641120 GTATTCATGTACCTGGTATGTC 58 NA Mus musculus 50 Uchl3 ENSMUSG00000022111 ENSMUST00000002289,ENSMUST00000066470 1 2 2 90 14 102065874 102066215 AGATGCACTTCGAATCAGG 59 102066269 102066287 TTCTCCAGGAATTTGGCTC 59 NA Mus musculus 50 Rab2b ENSMUSG00000022159 ENSMUST00000022765,ENSMUST00000100631 1 2 2 80 14 52888370 52888388 GACCTCATGGTTAGAGGAC 58 52885968 52888329 TCTAGATCACTCTTATTCCCGA 59 NA Mus musculus 50 Psmb5 ENSMUSG00000022193 ENSMUST00000022803 2 1 1 81 14 55235399 55235417 ATCAGTACAAAGGCATGGG 59 55233303 55235354 TCTACGTAGTAGAGGCCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Map3k7ip1 ENSMUSG00000022414 ENSMUST00000023050 3 1 1 166 15 79989326 79990510 CACACTCACTAACCAGAGC 59 79990640 79990658 AGAACTCAGCAAAGTCCAC 59 NA Mus musculus 50 Pp11r ENSMUSG00000022468 ENSMUST00000100249,ENSMUST00000023105 3 2 2 83 15 97550107 97550559 GTGATCATGAGGGTTTCTC 57 97550042 97550060 CTACCCTGTAGATGGTCTC 57 NA Mus musculus 50 4930570C03Rik ENSMUSG00000022473 ENSMUST00000023111 1 1 1 90 15 97620494 97621028 GCATCAGAGTCTCAAAGAC 57 97621081 97621100 GTAGAGGCTAAGTAGGAAGG 58 NA InUTR Mus musculus 50 Mpv17l ENSMUSG00000022679 ENSMUST00000023360 1 1 1 88 16 13944817 13946659 GAATACGTATAAGAGTGGTCTC 57 13946872 13946890 TATATGCTGTCCTCCAGTG 58 NA Mus musculus 50 Boc ENSMUSG00000022687 ENSMUST00000023370,ENSMUST00000114634 2 2 2 84 16 44491863 44491881 GTGGGAGATTGGATACTGG 59 44491458 44491818 AAGAAATACCTTTCTCTAGGCC 59 NA Mus musculus 50 Pdia5 ENSMUSG00000022844 ENSMUST00000023550 2 1 1 80 16 35456222 35456561 TTATTCCATTACCAGGACGG 59 35453609 35453628 TTTCAGAAAGGCCACTATGG 59 NA Mus musculus 50 Zfp641 ENSMUSG00000022987 ENSMUST00000023722 2 1 1 80 15 98119645 98120921 GTCACATATACAGGAGACGG 59 98119584 98119603 ACTGGATAATGTTCTGGGAG 58 NA Mus musculus 50 Dip2b ENSMUSG00000023026 ENSMUST00000100203,ENSMUST00000023768,ENSMUST00000108971 2 3 3 82 15 100026318 100029376 GCCATCATTGATACAGATGAC 58 100029420 100029438 AGATACGCCAACATCTCAG 59 NA Mus musculus 50 Bsg ENSMUSG00000023175 ENSMUST00000067036,ENSMUST00000105381 2 2 2 87 10 79172564 79172812 GAAGTACATAGTGGACGCA 59 79172863 79172881 CACATTGATCTCGCTTCTG 58 NA Mus musculus 50 Strn ENSMUSG00000024077 ENSMUST00000024881,ENSMUST00000112483 3 2 2 90 17 79064129 79066477 CTCACTAGCTTATGATATAGCG 57 79064060 79064078 GATGCCATCAAAGTGACTC 58 NA Mus musculus 50 Slc3a1 ENSMUSG00000024131 ENSMUST00000024944 3 1 1 106 17 85459216 85460156 ATGATAGTACTACCCTTGTCTC 58 85460223 85460241 GTAGTCAGAGTTTGTGGGT 58 NA Mus musculus 50 Gbl ENSMUSG00000024142 ENSMUST00000070888 3 1 1 82 17 24615097 24615272 AGGACTCTCAGGTAAATGC 58 24614948 24614967 ATACATGCGGATATGTTGGT 59 NA Mus musculus 50 Stard4 ENSMUSG00000024378 ENSMUST00000025236 1 1 1 105 18 33363461 33364714 TTATCCTGTGGTGTGAGTG 58 33363374 33363392 TTGGACTGTCTTTGAGTGG 59 NA Mus musculus 50 Anxa1 ENSMUSG00000024659 ENSMUST00000099584,ENSMUST00000025561 3 2 2 81 19 20459067 20459197 GAACAGGAATATGTTCAAGCTG 59 20459007 20459027 ATACATTGAAGGAAGGGTAGG 58 NA Mus musculus 50 Ankrd1 ENSMUSG00000024803 ENSMUST00000025718 3 1 1 80 19 36190053 36191271 TCCGAGATATGCTTGAATCC 59 36189992 36190010 TGTTCAGCAACAGTTTCAG 58 NA Mus musculus 50 Mxi1 ENSMUSG00000025025 ENSMUST00000003870,ENSMUST00000025998,ENSMUST00000111737 2 3 3 88 19 53405963 53420948 ACTGCCAACAGATCTACAC 59 53444061 53444079 GGGATCAGAACTTTCAAGC 58 NA Mus musculus 50 Mxi1 ENSMUSG00000025025 ENSMUST00000003870,ENSMUST00000025998,ENSMUST00000111737 3 3 3 138 19 53405963 53420948 ACTGCCAACAGATCTACAC 59 53444111 53444129 CTTTGTTGAGCAAACCGAG 59 NA Mus musculus 50 Hdhd2 ENSMUSG00000025421 ENSMUST00000097522,ENSMUST00000026485,ENSMUST00000097521 1 3 4 80 18 77193855 77193874 AAACTTAATCGAGCAGAAGC 58 77193916 77195587 GTTTGAACTCCTGTGAACTC 58 NA Mus musculus 50 Crisp1 ENSMUSG00000025431 ENSMUST00000026498 3 1 1 82 17 40431449 40435110 GCTATGCACCAATAGTTGTG 59 40431386 40431405 GTTCATGTTCACAGGATAGC 58 NA Mus musculus 50 Sigirr ENSMUSG00000025494 ENSMUST00000097958 3 1 1 80 7 148278927 148278946 CTCTATGTTAAGTGTCGGCT 59 148278618 148278886 TAACTTCCCATCGTTCATCTC 59 NA Mus musculus 50 Gusb ENSMUSG00000025534 ENSMUST00000026613,ENSMUST00000111308,ENSMUST00000026614 3 3 3 96 5 130475934 130476243 CTGACACCTCCATGTATCC 59 130475856 130475875 GTATAGAGGACCACAGATCG 58 NA Mus musculus 50 Gaa ENSMUSG00000025579 ENSMUST00000106259,ENSMUST00000106258,ENSMUST00000026666 3 3 4 100 11 119131984 119134196 CACTTCAAGATCAAAGATCCTG 59 119134257 119134275 AATTCCACGCTGTAAAGTG 58 NA Mus musculus 50 Imp4 ENSMUSG00000026127 ENSMUST00000027303 3 1 1 82 1 34501047 34501066 TGTCTACAAGAAGACAGACC 58 34501108 34501217 GGCGAATCATATACAACTTGAG 59 NA Mus musculus 50 Dnpep ENSMUSG00000026209 ENSMUST00000066668,ENSMUST00000113605 2 2 2 80 1 75310983 75311003 CCTATGAAGAGTTCATCTTCG 57 75310069 75310941 AGGAATCAATCAATGCCTG 57 NA Mus musculus 50 Gpr35 ENSMUSG00000026271 ENSMUST00000027489,ENSMUST00000064480 1 2 2 110 1 94869858 94879738 GGTAGTGACTGTGCTATCG 59 94879812 94879830 AAGCAGATGACAAACACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rnf2 ENSMUSG00000026484 ENSMUST00000076110 3 1 1 83 1 153325718 153325736 GACAAATGGAACTCAACCA 57 153324149 153325671 TCTGTTATTGCCTCCTGAG 58 NA Mus musculus 50 Slc30a10 ENSMUSG00000026614 ENSMUST00000061093 2 1 1 81 1 187286791 187287959 ACATGGAAGAGCTGATGAG 59 187288002 187288022 CTTATAAGTTCCCAGATGTGC 58 NA Mus musculus 50 Phyh ENSMUSG00000026664 ENSMUST00000027975 3 1 1 81 2 4849726 4849745 TATGTGGAGTGTTTCACTGG 59 4849789 4851767 TCTTCTTGCCAACATCTGG 59 NA Mus musculus 50 Stam ENSMUSG00000026718 ENSMUST00000102960,ENSMUST00000028050,ENSMUST00000114738 3 3 3 80 2 14024043 14024062 AGTTGAATACTGCTGAGGAC 59 14024105 14037454 AATCTTTAGGTCCTGTGCG 59 NA Mus musculus 50 2010311D03Rik ENSMUSG00000026766 ENSMUST00000102769 2 1 1 60 2 50143348 50143366 GACTGTCTGGAGTGAAGAG 59 50136701 50143326 ACTGATGAACTTCTCCAAGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Cel ENSMUSG00000026818 ENSMUST00000028161 3 1 1 86 2 28415144 28415163 CATCAGTCAGAGTGGTATGG 59 28414940 28415096 CCTACCTTCTTAGCAATCGT 59 NA Mus musculus 50 Notch1 ENSMUSG00000026923 ENSMUST00000028288,ENSMUST00000102908,ENSMUST00000114062 1 3 3 136 2 26325896 26325914 TACCATGGGTCTAACTGCT 59 26325563 26325796 ATCTCACAGTGTACACCCT 59 NA Mus musculus 50 Lcn5 ENSMUSG00000026937 ENSMUST00000100313,ENSMUST00000028306,ENSMUST00000100312 2 3 3 85 2 25513898 25513916 CACAAGGAGGAGAAGATGG 59 25513965 25515585 TGGCCCTCATTGTAATAGG 58 NA Mus musculus 50 Nmi ENSMUSG00000026946 ENSMUST00000028314,ENSMUST00000112705 2 2 2 107 2 51808036 51808054 TCTGTAAGTCCAGGAATGG 58 51805596 51807965 AAATCTTGTCAACAACGCC 59 NA Mus musculus 50 Jag1 ENSMUSG00000027276 ENSMUST00000028735 1 1 1 80 2 136919046 136920196 TTCCACAAACATCGATGAC 58 136918984 136919002 CACTTGAATCCATTCACCA 57 NA Mus musculus 50 1700037H04Rik ENSMUSG00000027327 ENSMUST00000103188,ENSMUST00000028800 2 2 3 116 2 130973980 130973998 GATTACCTTCACTCTGCCT 58 130973010 130973900 ATGCTGTAACCTTCAGAGG 58 NA Mus musculus 50 Ggtl3 ENSMUSG00000027603 ENSMUST00000029131 2 1 1 86 2 155319403 155319421 GAACAGGAACCTGAGTGAC 59 155316843 155319353 GTGAACTCACTGTCAACCT 59 NA Mus musculus 50 Slc35a3 ENSMUSG00000027957 ENSMUST00000029569 2 1 1 89 3 116397405 116397423 CTGTCTTCTACAGCAGTGG 59 116390330 116397354 TCTCACACTACACTTACTGTC 58 NA Mus musculus 50 Kcnq5 ENSMUSG00000028033 ENSMUST00000029667,ENSMUST00000115300 1 2 2 80 1 21395917 21395938 GTCATTGAACAATACTCTGCTG 59 21395124 21395877 AAGAATTTGATCAACGCGTG 59 NA Mus musculus 50 Fmo5 ENSMUSG00000028088 ENSMUST00000107050,ENSMUST00000107049,ENSMUST00000029729 1 3 3 80 3 97442859 97442878 CATTGTAATTGGCATTGGGA 58 97442921 97445604 GTACTGAGGAATACCTGCT 58 NA Mus musculus 50 Nudt17 ENSMUSG00000028100 ENSMUST00000029742 2 1 1 152 3 96511563 96511740 TCTTGCAGATACTGGAGTG 58 96511172 96511190 TGAGGTGATGGTATTTGGG 58 NA Mus musculus 50 Rpe65 ENSMUSG00000028174 ENSMUST00000029824 1 1 1 80 3 159285787 159285805 TACCAGAAATTTGGAGGGA 57 159285849 159285970 CTTACAGAGCTTGTCAGGA 58 NA Mus musculus 50 Ube2j1 ENSMUSG00000028277 ENSMUST00000029944,ENSMUST00000108163 3 2 2 83 4 33125231 33125249 GGAGGAGTTTACCATGGAC 59 33125296 33127716 TCCATTAGCTGTTAGCAGG 59 NA Mus musculus 50 Rad23b ENSMUSG00000028426 ENSMUST00000030134 1 1 1 80 4 55393978 55395361 ATCTTCTAATGGGAATCCCTG 58 55395403 55395421 GAGTTCCAGTACTCACAGC 59 NA Mus musculus 50 Car9 ENSMUSG00000028463 ENSMUST00000107917 2 1 2 138 4 43522023 43522041 GAACTTCATGAAGCCTTGG 58 43523128 43525295 AATTCACATGGACTTCCTCC 59 NA Mus musculus 50 Ptplad2 ENSMUSG00000028497 ENSMUST00000068220,ENSMUST00000030221 1 2 2 89 4 88068951 88068969 CATCTTATGCTGCCTTGAC 58 88065714 88068900 GATAGATGGTGAATGCTTCAG 58 NA Mus musculus 50 Sgip1 ENSMUSG00000028524 ENSMUST00000097948,ENSMUST00000072481,ENSMUST00000102775,ENSMUST00000106882,ENSMUST00000080728,ENSMUST00000066824,ENSMUST00000106879,ENSMUST00000097946 2 8 9 60 4 102542366 102542385 CTGAGCTAGATGAAGAAGGT 58 102542408 102543166 TTTCCTTTGGTAGAGCCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Angptl3 ENSMUSG00000028553 ENSMUST00000030280 3 1 1 80 4 98700048 98701144 AGAACAAGATGACCTTCCTG 59 98701186 98701205 GGTTTAATAGTGTACACGCC 58 NA Mus musculus 50 Ncdn ENSMUSG00000028833 ENSMUST00000030637,ENSMUST00000106116 1 2 2 67 4 126424363 126424381 CATCTTCCTCAACCTGGTG 59 126423907 126423925 TAAGAGATGTGAAGCAGGC 59 NA DesignNoJunction Mus musculus 50 D4Wsu114e ENSMUSG00000029022 ENSMUST00000030886,ENSMUST00000105717 1 2 2 80 4 147239369 147239771 CATCTAAGCCCAGAGTGAC 59 147239307 147239326 AATCATAGCCTAGGTATGGC 58 NA Mus musculus 50 Gltpd1 ENSMUSG00000029073 ENSMUST00000105586 3 1 2 148 4 155240789 155241254 CCACTATATTGCCGGACTG 59 155240659 155240677 GAGTGATAGTTAGCCAGCG 59 NA Mus musculus 50 Spata18 ENSMUSG00000029155 ENSMUST00000041422,ENSMUST00000113548,ENSMUST00000071077 1 3 3 85 5 74062436 74062454 ATACTGACTTTGAGACCGC 59 74062502 74063585 GATCACATCATTGACACTGC 59 NA Mus musculus 50 9130005N14Rik ENSMUSG00000029185 ENSMUST00000031080 1 1 1 81 5 65419725 65421307 TGACAAACTCAATAAGGCCA 59 65421351 65421369 TTTGGCCACATCTATCGAC 59 NA Mus musculus 50 Ambn ENSMUSG00000029288 ENSMUST00000031226 2 1 1 81 5 88892426 88892444 GAAGGAGAGCTGATAGCAC 59 88892486 88893511 AATCCATTATTGGTACCTCAGG 59 NA Mus musculus 50 Vps33a ENSMUSG00000029434 ENSMUST00000031388 3 1 1 81 5 124019480 124019501 AGAAGAATACAGCTTGGATCTC 59 124015076 124019438 GTAGCACTCTTTGAAAGCG 59 NA Mus musculus 50 Sfrs8 ENSMUSG00000029439 ENSMUST00000053737,ENSMUST00000031394 3 2 2 218 5 130076416 130076887 TAACTCAGGATCTCATGGC 58 130077069 130077087 GGATAGCTGCATGTAGGTC 59 NA DesignRelaxed, InUTR Mus musculus 50 P2rx7 ENSMUSG00000029468 ENSMUST00000086247 1 1 3 80 5 123104171 123104192 GGAACTCATTCTTTGTCATGAC 59 123104233 123105000 GGTTGGAAAGATCCTCAGG 59 NA Mus musculus 50 Cyp3a25 ENSMUSG00000029630 ENSMUST00000068317 2 1 1 98 5 146804930 146806452 AAACTCAAGGAGATGTTCCC 59 146804851 146804869 TTTCATACTGATGGGCTCC 59 NA Mus musculus 50 Hsp110 ENSMUSG00000029657 ENSMUST00000076410,ENSMUST00000074846,ENSMUST00000110499,ENSMUST00000110498 2 4 4 83 5 150421118 150421333 CTTCAGAGGCAAGGATGAG 59 150421053 150421073 TCCATCACCTCATTAACAGAC 59 NA Mus musculus 50 Fkbp9 ENSMUSG00000029781 ENSMUST00000031795 2 1 1 82 6 56825754 56825772 GAATGGTGAAGTGTCTCCC 59 56825818 56828037 ACTCTGAGAACTCCTCCAG 59 NA Mus musculus 50 Pcyox1 ENSMUSG00000029998 ENSMUST00000032065 3 1 1 100 6 86342335 86344415 ACAAGTTCATGAGGATCTACC 59 86342255 86342273 CAGTCTGACGTAGTCATCC 59 NA Mus musculus 50 MGI:1889515 ENSMUSG00000030188 ENSMUST00000032307 1 1 1 82 6 131234739 131235674 GTAAATCAGTCAAAGGATCCTG 58 131234678 131234696 ATGAGGCTGAACACTAAGC 59 NA Mus musculus 50 Plekha5 ENSMUSG00000030231 ENSMUST00000032357,ENSMUST00000087622,ENSMUST00000032358 3 3 3 80 6 140492637 140492658 GAATTCAATGCAACAGCTAGAG 59 140492698 140499290 GAAATTACTCCTCTGGGCTC 59 NA Mus musculus 50 Scnn1a ENSMUSG00000030340 ENSMUST00000081440 3 1 1 81 6 125288407 125288862 GTATGAGAAAGGAAGCCCT 58 125288907 125288925 TTCTTGACAGGGACATCAC 59 NA Mus musculus 50 Tead4 ENSMUSG00000030353 ENSMUST00000006311,ENSMUST00000112157 3 2 2 84 6 128193439 128193457 CATAGCTAGCTCCAAGCTC 59 128192578 128193393 CAGGTGTTTGTTGTATGTGTC 59 NA Mus musculus 50 Pop4 ENSMUSG00000030423 ENSMUST00000032585 3 1 1 85 7 39049444 39050934 GGTGCTATTATTTCAGTCACG 59 39049379 39049398 AAGACATGTTTGGTCTCCTG 59 NA Mus musculus 50 2210411K11Rik ENSMUSG00000030431 ENSMUST00000032596 2 1 1 68 7 4740922 4740940 GACCTGCTCATCTACTCTG 58 4740872 4740890 GGTGTACCAGAGAATCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nipa2 ENSMUSG00000030452 ENSMUST00000032635 3 1 1 150 7 63198375 63198396 CCATGCATATCTTAAGGAATGG 58 63191316 63192947 AGACAGAATGGCACTTACG 59 NA Mus musculus 50 Stard10 ENSMUSG00000030688 ENSMUST00000032927 2 1 1 81 7 108491087 108491107 TGGGACAGTAATGTCATTGAG 59 108491147 108491706 GACACCTCCAGGAATAATATCC 59 NA Mus musculus 50 Ate1 ENSMUSG00000030850 ENSMUST00000094017,ENSMUST00000033139,ENSMUST00000035458 2 3 3 99 7 137562069 137607652 GATACAAGGGTCAATATAGACC 57 137561991 137562009 TACTTGGAGTTGTCCAGAG 58 NA Mus musculus 50 St5 ENSMUSG00000031024 ENSMUST00000079282,ENSMUST00000077909,ENSMUST00000084738 2 3 3 81 7 116681853 116682460 CAGAATACAGCAGTGAAACC 58 116681791 116681809 AGTAAGCGCCTACAATAGC 59 NA Mus musculus 50 Fgf13 ENSMUSG00000031137 ENSMUST00000033473,ENSMUST00000088612 1 2 3 94 X 56385082 56385100 AACTATACAGCCGACAAGG 59 56379164 56385027 GTTAAACAGAGTGTAAGTGCTG 59 NA InUTR Mus musculus 50 Acsl4 ENSMUSG00000031278 ENSMUST00000033634,ENSMUST00000112904,ENSMUST00000112903,ENSMUST00000112907 3 4 4 80 X 138768260 138768278 ACACTACTGGAAGAGTTGG 58 138766912 138768217 GAACTGTATAACCACCTTCC 57 NA Mus musculus 50 Morf4l2 ENSMUSG00000031422 ENSMUST00000113095 3 1 4 88 X 133269033 133274354 CAGAATACAGGTGGTTGGA 58 133268963 133268982 TTCTTCAGCAGATTGTTGTC 58 NA InUTR Mus musculus 50 Adrb3 ENSMUSG00000031489 ENSMUST00000081438 1 1 2 109 8 28337808 28337826 CTTCTGTGTAGCTACGGTG 59 28337254 28337736 TAGCCATCAAACCTGTTGAG 59 NA Mus musculus 50 Gpsn2 ENSMUSG00000031708 ENSMUST00000019382 1 1 1 98 8 86095952 86096143 CTACACTTATGAGGTGGGC 59 86095795 86095813 ATAGTCATCTGGGTGAAGC 58 NA Mus musculus 50 2400003C14Rik ENSMUSG00000031729 ENSMUST00000034164 1 1 1 80 8 112203367 112203388 CCAAATACAGCAAGGAATATGG 59 112202850 112203326 TCAGTTTGTGCATTAGCCT 59 NA Mus musculus 50 Cenpn ENSMUSG00000031756 ENSMUST00000034205 2 1 1 84 8 119450141 119450160 GGAAGTGATTCTGCTATGTG 58 119452477 119454994 CCGATGAAATTGAGTATACACG 59 NA Mus musculus 50 Cdyl2 ENSMUSG00000031758 ENSMUST00000109102,ENSMUST00000109101 1 2 2 115 8 119113312 119118870 ACTCCTGAGATCATGAAGGA 59 119113216 119113234 GAATAGTCTAGTCCGCTGC 59 NA Nonspecific Mus musculus 50 Ldhd ENSMUSG00000031958 ENSMUST00000070004,ENSMUST00000093128 3 2 2 143 8 114152539 114152557 CATTACATCAACCACCCTG 58 114152328 114152428 ATCTAGGAACTCAATGCGA 58 NA Mus musculus 50 Rexo2 ENSMUSG00000032026 ENSMUST00000034524,ENSMUST00000114532 3 2 2 73 9 48287451 48287470 AGATTATTGAGATGGCCTGC 59 48283285 48287415 GATAATCAGGTTGGGACCT 58 NA DesignNoJunction Mus musculus 50 Rdx ENSMUSG00000032050 ENSMUST00000000590,ENSMUST00000061352 3 2 2 80 9 51877813 51877834 CCTGATACTATTGAAGTACAGC 58 51877874 51881268 TAATTGTGCCCTTTCTAGCT 59 NA Mus musculus 50 Sltm ENSMUSG00000032212 ENSMUST00000049263 1 1 2 80 9 70410631 70410650 CTCAAGAAGGTGAAGATGAC 57 70419977 70421278 CAGAACCTGCTATATCTTTCTC 58 NA Mus musculus 50 Anp32a ENSMUSG00000032249 ENSMUST00000085519 3 1 1 197 9 62219616 62219634 TACAATCAACGTAGGCCTC 59 62219986 62221305 TTCTCTAACTTCTTCAGCGG 59 NA Mus musculus 50 Ankk1 ENSMUSG00000032257 ENSMUST00000034792 3 1 1 83 9 49224942 49226155 AGACAGTGTCTCAAGTGAC 58 49224877 49224896 TTCTCGTAGACATCACTTGC 59 NA Mus musculus 50 Ireb2 ENSMUSG00000032293 ENSMUST00000034843 3 1 1 80 9 54747904 54748264 GAGCCTTTAGGTACTGACTC 59 54748305 54748325 CATCTGATGAACTTCTTCTCG 58 NA Mus musculus 50 Gorasp1 ENSMUSG00000032513 ENSMUST00000035099 2 1 1 81 9 119839213 119839347 TCTCCAGGAGTCAGAAGAC 59 119839150 119839170 CTCCGAGTTATACACCATCAG 59 NA Mus musculus 50 Fanca ENSMUSG00000032815 ENSMUST00000035495 1 1 1 80 8 125830369 125830388 TTTCACTTGATACCCTGGAG 59 125829746 125830327 CGGAGTAGATAGGAATCCAG 58 NA Mus musculus 50 Polr2f ENSMUSG00000033020 ENSMUST00000040077 2 1 1 116 15 78971852 78975029 ACAACGAGGACAATTTCGA 59 78976498 78976516 CAGATGGGAGAATCTCGAC 59 NA DesignNoJunction Mus musculus 50 Fa2h ENSMUSG00000033579 ENSMUST00000038475,ENSMUST00000093130,ENSMUST00000109156 3 3 3 98 8 113880046 113880065 AGTATGATGAGTGGGTTCAC 59 113879396 113879986 GGACACTATACCAGACAGTC 58 NA Mus musculus 50 Gucy1a3 ENSMUSG00000033910 ENSMUST00000094162,ENSMUST00000048976 3 2 2 84 3 81898809 81901536 CACATACAGGTTACTCAAAGAC 58 81898746 81898764 GTCACTAGGGAAGTTTGGT 58 NA Mus musculus 50 6330416L07Rik ENSMUSG00000033972 ENSMUST00000115535,ENSMUST00000074295 1 2 3 80 17 22480655 22480673 TTTCCTGACACAGACTTGG 59 22478047 22480611 AATGTTAACTGACCCTGGG 59 NA InUTR Mus musculus 50 2810012G03Rik ENSMUSG00000034300 ENSMUST00000049281,ENSMUST00000097622 1 2 2 255 18 34928599 34930265 TGAATCAGAAACCATACTCAGG 59 34930481 34930499 ATCAGATTCAGGTCCAGGT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ramp1 ENSMUSG00000034353 ENSMUST00000048383 2 1 2 80 1 93093474 93102980 GAAAGACCATACAGGATCTG 57 93103023 93103041 GTAGCCTTGACAATACCAG 57 NA Mus musculus 50 5830443L24Rik ENSMUSG00000034438 ENSMUST00000072890,ENSMUST00000031235,ENSMUST00000112718 2 3 3 195 5 105446893 105447588 AGCTGGTGGAATTAATAGGT 58 105446717 105446735 ACTTGCCAGTAATCATGCT 59 NA Mus musculus 50 Scn10a ENSMUSG00000034533 ENSMUST00000084787 3 1 1 80 9 119560199 119567535 CTTCTGTCATTGAGGAGCT 58 119560137 119560155 ATATCAGGTACTTCTGGGC 58 NA Mus musculus 50 Ppm1h ENSMUSG00000034613 ENSMUST00000067918 1 1 1 80 10 122344607 122344628 CCATGACTTAAAGGTTCATGAC 59 122344668 122357766 AGATCGTAGACTCTGACCTC 59 NA Mus musculus 50 Grn ENSMUSG00000034708 ENSMUST00000049460 2 1 1 85 11 102296071 102296089 CTGATCCAGAGTAAGTGCC 59 102296138 102296388 CACTTCACCTCCTTCACTG 59 NA Mus musculus 50 Gpsm3 ENSMUSG00000034786 ENSMUST00000038244 2 1 2 283 17 34727193 34727411 AGATGGTGAACAGAGTCTC 58 34727836 34727854 CTTTGTCTTCAAGAAGCCG 59 NA DesignNoJunction Mus musculus 50 5830405N20Rik ENSMUSG00000034833 ENSMUST00000099102,ENSMUST00000042586 3 2 2 81 10 129793887 129793905 CCAGTTACTTGATCTTGGC 58 129793950 129797712 CTCTGAGATGCTTGAACTG 57 NA Mus musculus 50 Rtkn ENSMUSG00000034930 ENSMUST00000065512,ENSMUST00000087938 3 2 2 104 6 83100085 83100911 CATCAACAAGGAGACTAGGG 59 83100978 83100996 TTTGTCACCTCATCATCCC 59 NA Mus musculus 50 Baz1a ENSMUSG00000035021 ENSMUST00000038926 1 1 1 80 12 56012440 56013573 AGCCATCAAGGTTACAGAC 59 56012378 56012397 TTGCTCTCCTCACTTAACAG 59 NA Mus musculus 50 Tmem166 ENSMUSG00000035104 ENSMUST00000042974 3 1 1 108 6 82021216 82021236 CAGCCTGGTCTTATATCTCAG 59 82041857 82041875 GAGATCCTCATCACCAAGG 59 NA DesignNoJunction Mus musculus 50 Isg15 ENSMUSG00000035692 ENSMUST00000085425 1 1 1 179 4 155573891 155573909 CAGCAACATCTATGAGGTC 57 155573730 155573748 AAATGCTTGATCACTGTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 N28178 ENSMUSG00000036062 ENSMUST00000107975,ENSMUST00000107976,ENSMUST00000069184 1 3 3 113 4 42947683 42950725 ACTACTGTGACAACCTTAACC 59 42951053 42951071 CAAAGTCCTCCAGTGTCAG 59 NA Mus musculus 50 Abt1 ENSMUSG00000036376 ENSMUST00000041782 1 1 1 81 13 23514406 23514424 AGCCAGTCTACATAACACG 59 23514196 23514362 ATGCAAATACTTGAGGTTCC 58 NA Mus musculus 50 BC038479 ENSMUSG00000036395 ENSMUST00000040398,ENSMUST00000066560 2 2 2 80 9 26574713 26574732 CATACTGAGGATCTTGGTGG 59 26573648 26574670 CCAATTAAACCTTTGCGCT 59 NA Mus musculus 50 Tmem184a ENSMUSG00000036687 ENSMUST00000110832,ENSMUST00000044002 3 2 2 155 5 140283994 140284321 CTGCTACGAAGCATTTGTC 59 140283770 140283789 GTGATGGAGTAGGACATACC 58 NA Mus musculus 50 Wnt4 ENSMUSG00000036856 ENSMUST00000045747 1 1 1 117 4 136851434 136851452 GAGAACTGGAGAAGTGTGG 59 136851620 136851638 ACAAAGGACTGTGAGAAGG 59 NA DesignNoJunction Mus musculus 50 Neto2 ENSMUSG00000036902 ENSMUST00000109686,ENSMUST00000047344 1 2 2 99 8 88193501 88193519 CAACGGGAAGATTCATGTG 58 88187318 88193438 GTAAAGTCTGGATCTGGGA 57 NA Mus musculus 50 Spaca5 ENSMUSG00000037167 ENSMUST00000040437 2 1 1 80 X 20653798 20654739 TCGATTGTAATGACCTGCT 58 20654782 20654801 TACTCTTATGTGAGGATGCA 57 NA Mus musculus 50 Hook3 ENSMUSG00000037234 ENSMUST00000037182 3 1 1 80 8 27182888 27184085 AATTGGATATGCAGGTTGC 58 27182826 27182847 TGAGTCGTTCCATTAGTATCTG 59 NA Mus musculus 50 Tbcel ENSMUSG00000037287 ENSMUST00000066148,ENSMUST00000066179 2 2 2 89 9 42258068 42258087 GATGAAAGAGAAATCGCAGC 59 42252663 42258016 CTTACTGACCTCATGCCAG 59 NA Mus musculus 50 Tspan14 ENSMUSG00000037824 ENSMUST00000047652 1 1 1 81 14 41728721 41728739 TCGAGAGCAACATCAAGTC 59 41726766 41728677 CAGCACTGATTAGCTTTCTG 58 NA Mus musculus 50 Sh2d4b ENSMUSG00000037833 ENSMUST00000096000,ENSMUST00000070328 3 2 2 80 14 41633955 41633973 CTTCTACAGCTTTCTGGGA 58 41629239 41633911 ATGATCTCCTCCTTGTGGA 59 NA Mus musculus 50 Muc5ac ENSMUSG00000037974 ENSMUST00000041924 1 1 1 80 7 148981756 148981774 CATGGTGAAAGCTACTGGA 59 148981818 148981921 AAGAAGGTAGCATTGGCTG 59 NA Mus musculus 50 Prdm1 ENSMUSG00000038151 ENSMUST00000105490,ENSMUST00000039174 3 2 2 82 10 44176486 44176504 GTACTTCTGTTCAAGCCGA 59 44170036 44176440 GCCAATAACCTCTTTGCTG 59 NA Mus musculus 50 C1rl ENSMUSG00000038527 ENSMUST00000049124 2 1 1 95 6 124444054 124455261 CTGTCACAATTTCAACTGGAG 59 124455318 124455336 ATACAAACTCCCTGTGACC 58 NA Mus musculus 50 Creb3l2 ENSMUSG00000038648 ENSMUST00000041093 2 1 1 80 6 37303606 37303624 GTGGAGTCTTGTTCAACTG 58 37286302 37303563 CTGAAGGAGAGTCCTATTGG 58 NA Mus musculus 50 Nudcd1 ENSMUSG00000038736 ENSMUST00000066292 2 1 2 60 15 44246329 44252280 CTTAACAGTGATGCTGATGAG 58 44246289 44246309 CTACAAGAGAAAGCTTCTCTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Garnl4 ENSMUSG00000038807 ENSMUST00000094030 2 1 4 147 11 74298467 74380729 TCTGAAGGTCAAGAAGCAG 59 74250951 74255255 CGGGATATAGTCATCCTGC 59 NA Mus musculus 50 Birc7 ENSMUSG00000038840 ENSMUST00000108875 3 1 2 140 2 180667916 180667934 GTCTCCATAGTCTTCGTGC 59 180668038 180668540 CTCTGCAGTGTAGTTCCTG 59 NA InUTR Mus musculus 50 Isg20 ENSMUSG00000039236 ENSMUST00000038151 2 1 2 97 7 86061607 86064603 CAAGAACATCCAGGTCCTG 59 86064664 86064682 CCATTCCGACATAGAGCAG 59 NA Mus musculus 50 Exosc2 ENSMUSG00000039356 ENSMUST00000038474,ENSMUST00000113464 3 2 2 80 2 31532243 31533977 TGAAATATGGGAAGCTAGGTC 59 31534017 31534037 CATGGAAATGAGTCTTCTGTC 58 NA Mus musculus 50 Plekhg5 ENSMUSG00000039713 ENSMUST00000105662,ENSMUST00000084115,ENSMUST00000105661 1 3 3 102 4 151486533 151486631 ATTTACAACGCACAGAACC 58 151486697 151486715 CATCTTCCTCCTCTTCCAG 58 NA Nonspecific Mus musculus 50 Gnaz ENSMUSG00000040009 ENSMUST00000037813 2 1 1 61 10 74454868 74477613 TATGAGGACAACCAGACGA 59 74477637 74477656 TTGCAGATGGAGTCAAAGAG 59 NA DesignNoJunction Mus musculus 50 Pitpnm3 ENSMUSG00000040543 ENSMUST00000075258,ENSMUST00000108508,ENSMUST00000108507 3 3 3 172 11 71869774 71869792 TGATCCTTTACATCACGGG 59 71865460 71869638 TTTGATGAAACACTCCTGC 58 NA Mus musculus 50 Wbscr27 ENSMUSG00000040557 ENSMUST00000047196,ENSMUST00000111221,ENSMUST00000111219,ENSMUST00000068617,ENSMUST00000111218 2 5 5 70 5 135408705 135409348 GGAGTATGACCAGGATGTG 59 135409382 135409400 CTCGACTGAGACAATCCAC 59 NA DesignRelaxed Mus musculus 50 D4Ertd22e ENSMUSG00000040842 ENSMUST00000102487 1 1 3 62 4 140676269 140676287 AAATAGACAGACGGTTGGA 58 140674683 140676243 ATTTGGATTTCCTGCTCTC 57 NA DesignRelaxed Mus musculus 50 Reps2 ENSMUSG00000040855 ENSMUST00000112334,ENSMUST00000101102,ENSMUST00000039359 2 3 3 83 X 158958185 158960863 CTTATATCTGGGAACTCAGTG 57 158958122 158958140 CTACGATGAGATGGAATGC 57 NA Mus musculus 50 S100pbp ENSMUSG00000040928 ENSMUST00000106059,ENSMUST00000072431,ENSMUST00000106061 3 3 4 80 4 128857510 128858999 GTTCATCAAACAGACATGCC 59 128857449 128857467 GAACAGGAATGACTTTGCC 59 NA Mus musculus 50 Mtap7d2 ENSMUSG00000041020 ENSMUST00000112471,ENSMUST00000058145,ENSMUST00000043151,ENSMUST00000112470,ENSMUST00000087141 1 5 5 115 X 155907919 155907938 CATACAAGTCCTCTCCAACC 59 155908016 155910765 TTTCTCCATCTGTGAAGGC 59 NA Mus musculus 50 Ripk2 ENSMUSG00000041135 ENSMUST00000037035 3 1 1 80 4 16079108 16079126 GCCACCTGAGAACTATGAG 59 16066384 16079066 CACATGATAACTGCATAGCTG 59 NA Mus musculus 50 Nthl1 ENSMUSG00000041429 ENSMUST00000047611 3 1 1 97 17 24772680 24775374 ATATCAGGCATAGCAGTGG 58 24775434 24775453 TTCTTACGTGTCTCTTCTGG 59 NA Mus musculus 50 Irf8 ENSMUSG00000041515 ENSMUST00000047737 3 1 1 147 8 123278391 123278904 CATTCTGGTGCAGGTAGAG 59 123279014 123279033 GTGTGAGGTACAGATATCCG 59 NA Mus musculus 50 Ptchd2 ENSMUSG00000041544 ENSMUST00000047720,ENSMUST00000097784 3 2 2 83 4 147635302 147644496 CAGTCCACTAGCAAAGTCC 59 147635237 147635257 CATGTCGTTATTGAAGGTTCG 59 NA Mus musculus 50 Tmtc4 ENSMUSG00000041594 ENSMUST00000037726,ENSMUST00000088343,ENSMUST00000057683 2 3 3 80 14 123332624 123340539 CCTCAATGCTAAGGTTCAC 58 123332562 123332580 CGGTAATATTTGATGGCCG 58 NA Mus musculus 50 BC006965 ENSMUSG00000041674 ENSMUST00000042883 1 1 2 63 11 112572406 112572424 TTCTTTGTCAAGTCTTGGG 57 112552994 112553012 TTCCAACAGATCTCCAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC057022 ENSMUSG00000041930 ENSMUST00000043650 1 1 1 165 5 115018426 115044360 CTGATACGGATTCCTGCTG 59 115060848 115060866 GAGGAATGCATAGAGCTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Pelo ENSMUSG00000042275 ENSMUST00000109226 1 1 1 78 13 115879459 115879478 TCTGCGATTACATGTTTCAG 58 115879168 115879418 ACCTGAAGGAATTTGGAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Itga1 ENSMUSG00000042284 ENSMUST00000061673,ENSMUST00000036276 1 2 2 80 13 115825529 115825550 ACTGGAGATGTCTATAAGTGTC 58 115821391 115825491 CGATGTGTTAACTGGTAAATCC 59 NA Mus musculus 50 Grap2 ENSMUSG00000042351 ENSMUST00000043149 3 1 1 105 15 80464767 80464785 TACTAAGCAACCAGGAGGA 59 80464854 80468889 CCTTCATGGAACCACTCAG 59 NA Mus musculus 50 E230019M04Rik ENSMUSG00000042433 ENSMUST00000044806 3 1 1 82 X 136611576 136616759 TCGAGAAATCCCAGATTATGAG 59 136616801 136616820 GATCCTTTCCTGTCAATCCT 59 NA Mus musculus 50 Map3k9 ENSMUSG00000042724 ENSMUST00000035987 1 1 1 80 12 82835236 82836068 AACTCATGGAAGACTGCTG 59 82835174 82835193 CTATAGTCGTTAGCTGGTCC 59 NA Mus musculus 50 Olfr769 ENSMUSG00000042801 ENSMUST00000050915 3 1 1 60 10 128548649 128548667 TGTATCTGTGCTCACAACG 59 128548607 128548627 TCGCAGTGTATAGATGAATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpx2 ENSMUSG00000042808 ENSMUST00000082431 1 1 1 172 12 77893970 77896141 GGAGAACTGTCAGAACGAG 59 77893816 77893834 AGAACGGGTCATCATAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr957 ENSMUSG00000042949 ENSMUST00000051653 1 1 1 60 9 39319141 39319159 ATCCTGTTCTCTTCTCACC 58 39319099 39319118 CGAAAGACAGATTACTGAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 C030030A07Rik ENSMUSG00000043298 ENSMUST00000111894 1 1 2 60 6 136779751 136779771 TACCATCATGCTATCACTGAG 59 136779216 136779730 AATCTGTTCATCTTAGCTGG 57 NA DesignNoJunction, InUTR Mus musculus 50 Rai2 ENSMUSG00000043518 ENSMUST00000112338,ENSMUST00000061514 2 2 2 60 X 158215502 158215520 CCAGAATCTTTCCATGGAC 57 158215543 158215562 CTCCAGTCTGTTATTAGCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tox3 ENSMUSG00000043668 ENSMUST00000109621,ENSMUST00000060304 2 2 2 155 8 92781909 92781927 CACCATCAACCAGTCTCAG 59 92778400 92781790 GCTCTGTTTGCATCATCAG 59 NA DesignNoJunction Mus musculus 50 Nhlrc1 ENSMUSG00000044231 ENSMUST00000052747 1 1 1 60 13 47109055 47109074 AAGCCTATAATCACTCACGG 59 47109014 47109032 AATTCTCCTTGGTGAAGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nhlrc1 ENSMUSG00000044231 ENSMUST00000052747 2 1 1 60 13 47108998 47109016 ATTCTCTTCTTGTGCTGGA 58 47108956 47108975 CCCTCCATCACTTTAAAGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1391 ENSMUSG00000044373 ENSMUST00000053387 3 1 1 60 11 49141550 49141569 GATTCTAGGATCGTATGCCC 59 49141592 49141610 ACCAGATGTTGACTTGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Znrf4 ENSMUSG00000044526 ENSMUST00000052211 1 1 1 282 17 56651621 56651639 TAACTTGAGCTCTGTGGAC 58 56651357 56651375 CTCCAAGTCCTCAAACTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 5031434C07Rik ENSMUSG00000044574 ENSMUST00000053559 1 1 1 60 6 112237994 112238012 TCTAGAGATGGAGCAAAGC 58 112237952 112237970 AAGTAAGAGAAAGCTGCGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 AB112350 ENSMUSG00000044968 ENSMUST00000115217,ENSMUST00000060899,ENSMUST00000057599 3 3 3 82 5 21171174 21176320 CCTTAGCTAATGAGCATTACC 58 21171112 21171132 GAAATCCTCACAAGAAAGTCC 58 NA Mus musculus 50 NM_019468.1 ENSMUSG00000045120 ENSMUST00000053876 2 1 1 60 5 62200969 62200988 GATGTCCGTAATGAGAAGGT 59 62201011 62201029 CATTGTCAGTTTCCACCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr460 ENSMUSG00000045514 ENSMUST00000051540 2 1 1 60 6 40522159 40522178 TCTATGTGAAACCCAAGCAG 59 40522201 40522219 ATCATCAAGGAAACCACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp553 ENSMUSG00000045598 ENSMUST00000056232,ENSMUST00000106312 1 2 2 60 7 134378881 134378900 CCAAGTAGGAAACACTTCTC 57 134378923 134378941 GTCCCATAAATCATCCCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zswim3 ENSMUSG00000045822 ENSMUST00000052107 2 1 1 60 2 164630923 164645268 GGATATCCTATATGTGCAGGT 58 164645290 164645308 TTTCTTCCTGTTTGACTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 5830418K08Rik ENSMUSG00000046111 ENSMUST00000098979,ENSMUST00000058041,ENSMUST00000115596,ENSMUST00000059410 3 4 4 80 9 15128059 15128077 GTCACATTCTCCTAACCCA 58 15127512 15128016 AAAGACTGTTCAGATCCCTC 59 NA Mus musculus 50 Olfr735 ENSMUSG00000046210 ENSMUST00000049729 3 1 1 60 14 50965451 50965469 ACTTCTACTGTGATGTCCC 58 50965409 50965427 TCAACCAAGTAAGTGTCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1341 ENSMUSG00000046790 ENSMUST00000061215 2 1 1 73 4 118382025 118382044 CAATCAGACCTTTGTGACAG 58 118382080 118382098 AGAAGAGAAGAGGTGTGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr61 ENSMUSG00000046793 ENSMUST00000116284 1 1 2 85 3 107952086 107952683 AAAGGGTGACAAAGGACTG 59 107952019 107952037 CTCTTGTACCCGAATGTCC 59 NA InUTR Mus musculus 50 1810007E14Rik ENSMUSG00000046804 ENSMUST00000061360 2 1 2 129 2 118598522 118600382 CCTACTCTACACTCTCAGGT 59 118603487 118603505 GATGTCCCTCATGACAGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Catsperb ENSMUSG00000047014 ENSMUST00000055156 1 1 1 80 12 102650612 102653449 ACAATTTGAAAGTCCGCTG 58 102653492 102653511 CTCCTGATGTAAAGAGACCC 59 NA Mus musculus 50 Acsm4 ENSMUSG00000047026 ENSMUST00000047045 1 1 1 80 7 126842260 126846792 TTCAGGAGTTACTTCAATCGG 59 126846833 126846852 TGAAGTAAATGGCCATTGGT 59 NA Mus musculus 50 2010001J22Rik ENSMUSG00000047394 ENSMUST00000049968 2 1 1 90 15 89208568 89208586 CTTACTCCATCTACAGCCG 59 89208269 89208287 GGATTCACTACGTGGTAGG 59 NA DesignNoJunction Mus musculus 50 Tmem121 ENSMUSG00000049036 ENSMUST00000058491 3 1 1 68 12 114426713 114426731 GACACTGCTACTGTCTGTG 59 114426763 114426781 TATTCCATGCGGTCTAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Krt82 ENSMUSG00000049548 ENSMUST00000023713 2 1 1 122 15 101373184 101373202 ACCAAGAGGTGATGAACTG 59 101372367 101372881 TGCTGACAGAGATATTCACAG 59 NA Mus musculus 50 BC023055 ENSMUSG00000049670 ENSMUST00000051772 2 1 1 66 19 42151047 42152465 GATGGCTCAAGGTATGAGG 59 42150999 42151017 ATCGAATGAAGACTCCGAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 4930430E16Rik ENSMUSG00000049811 ENSMUST00000094363,ENSMUST00000109557,ENSMUST00000058269,ENSMUST00000063007 3 4 4 110 11 22915871 22920004 GATTCGTCTTCGAGTTCTG 57 22920078 22920096 AGTAGTTGTGGACAAGGAG 58 NA Nonspecific Mus musculus 50 MGI:1921841 ENSMUSG00000050296 ENSMUST00000087268 2 1 1 80 1 71337956 71337976 AATCTGAACTTCTACGAAGGG 59 71335321 71337914 CAGCATGGAGATTGTTGTG 59 NA Mus musculus 50 Gp1bb ENSMUSG00000050761 ENSMUST00000051160 2 1 1 71 16 18620916 18620935 ATTGGCACTTCTACTAGGTC 58 18620864 18620882 GAGAACTCTTGGATGGAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A730017C20Rik ENSMUSG00000050875 ENSMUST00000058633 3 1 1 115 18 59222167 59222185 GTGGAAATTATCCTGCCAC 58 59225536 59226578 TATTGTAGAAAGGACCGCC 59 NA InUTR Mus musculus 50 Olfr853 ENSMUSG00000051160 ENSMUST00000058296 1 1 1 60 9 19342173 19342191 TCTTCCTCTCAAACCTGTC 58 19342131 19342149 ATCTTAGGAACAGTGGTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Taf7 ENSMUSG00000051316 ENSMUST00000066272 3 1 1 60 18 37802452 37802471 TGAAGAAGACGTAAACATCC 57 37802411 37802429 CTTGTCTTGTAGCTGTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Cacna1c ENSMUSG00000051331 ENSMUST00000112825 3 1 5 67 6 118543596 118543614 TTTGCACATGTTCTGTCTG 58 118543547 118543565 ATTCCTGCCATAGATCCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tbc1d22a ENSMUSG00000051864 ENSMUST00000109385,ENSMUST00000063414 2 2 2 91 15 86130123 86130144 GGAAACAGAAGGAATACTTTGC 59 86130195 86131984 GATATGGATCTGGCGATACG 59 NA Mus musculus 50 Cyp2j5 ENSMUSG00000052520 ENSMUST00000030299 2 1 1 97 4 96325347 96325365 TTGATTATGAGGACTGCCA 58 96308125 96325286 GAAGCCATTGTAGAGTTGG 58 NA Mus musculus 50 B830017H08Rik ENSMUSG00000053571 ENSMUST00000090145 3 1 1 250 16 17833433 17833452 AGGCCAAATTTCAAATACCC 58 17833667 17834467 CCATCTACATAGCCTCTGC 59 NA DesignRelaxed Mus musculus 50 H2-T24 ENSMUSG00000053835 ENSMUST00000116595,ENSMUST00000113760 1 2 3 170 17 36151639 36151760 CTTGTTCTGAAATGGGAGC 58 36143720 36151506 GTTCTTTCTTCTGACCTGAG 57 NA Mus musculus 50 BC055111 ENSMUSG00000054362 ENSMUST00000067387,ENSMUST00000106788 2 2 2 84 4 106287690 106287708 CAGAAGAAACCACAGAGCA 59 106286092 106287643 GGCCAGGATAATAATTCCCA 59 NA Mus musculus 50 Ugt2b5 ENSMUSG00000054630 ENSMUST00000113327,ENSMUST00000067790 1 2 2 296 5 87565243 87566239 CCTTGCCTAAGGATATGGA 58 87556857 87556875 GATAGATCGCCTCGTAGAC 58 NA DesignRelaxed Mus musculus 50 Rnd1 ENSMUSG00000054855 ENSMUST00000109149,ENSMUST00000003451 3 2 2 80 15 98506961 98506979 TTACACAGCCTGTTTGGAG 59 98504368 98506920 TTGTCATAGTAAGGAGAACCTG 59 NA Mus musculus 50 Ddx17 ENSMUSG00000055065 ENSMUST00000054014 2 1 1 80 15 79374181 79374202 GAGTGAACTCCCTAAATTTGAG 58 79373003 79374140 TCATCAACCTCATACGGAG 58 NA Mus musculus 50 Tead1 ENSMUSG00000055320 ENSMUST00000084705,ENSMUST00000059768,ENSMUST00000106638 1 3 3 87 7 120005063 120019600 CAGACTCGTACAACAAACAC 59 120019650 120019668 CGAATGTCCACAGATTCGA 59 NA Mus musculus 50 Zfp457 ENSMUSG00000055341 ENSMUST00000049705,ENSMUST00000068871 1 2 2 60 13 67397268 67397286 TACAGGGATGTGACATTGG 58 67396764 67397244 TAGAAGAAGCAAGACCCAG 58 NA DesignRelaxed Mus musculus 50 1110020C17Rik ENSMUSG00000055404 ENSMUST00000050338 1 1 1 60 14 66536308 66536327 GTATTTGGTCTCCTCAACTG 57 66536267 66536285 TCTGTTATTGGAACCATGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ctsr ENSMUSG00000055679 ENSMUST00000021889 1 1 1 80 13 61261889 61262521 TAAGGGAGGTATTTACCATGAG 58 61261830 61261849 TTAAATCCGTAACCAACCAC 58 NA Mus musculus 50 Dennd1b ENSMUSG00000056268 ENSMUST00000070283,ENSMUST00000094505 1 2 3 81 1 140936616 140938508 GATGTGGAAAGGGTGTCTC 59 140938552 140938571 CAAATCGCTGCTTACTTTCC 59 NA Mus musculus 50 5730446D14Rik ENSMUSG00000056445 ENSMUST00000069575 1 1 2 239 6 52115952 52115970 CACTCTGGGTTTCATACCC 59 52118381 52118402 GCCATTCTGTGGATTTATTTCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Rab31 ENSMUSG00000056515 ENSMUST00000070673 2 1 1 95 17 66017307 66045620 CTGATATTAGGGAGGTGCC 58 66017230 66017248 TGTTAATGGCATTCTTCGC 58 NA Mus musculus 50 9230105E10Rik ENSMUSG00000057143 ENSMUST00000059037 2 1 2 256 7 111491587 111493425 AGAAATACTGCAGGGTGTG 59 111489792 111489810 CAAGATTCCTTGCTTGGAG 58 NA DesignRelaxed Mus musculus 50 Olfr782 ENSMUSG00000057151 ENSMUST00000077024 1 1 1 78 10 128787676 128787694 CACAACTGCAAATTGTGGT 59 128787735 128787754 AGCACAATGATTAAGTTCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 V1rf1 ENSMUSG00000057203 ENSMUST00000079633 1 1 1 60 17 21365975 21365994 ATTAAAGCACATGGACTGGA 59 21366014 21366035 TAGGAGAGTTAAGAAGTTGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr668 ENSMUSG00000057770 ENSMUST00000072887 3 1 1 61 7 112074063 112074081 GCCTTACTCTCCTTCACTG 59 112074020 112074038 ATACACAGCATATTGGGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tubb2a ENSMUSG00000058672 ENSMUST00000056427 2 1 1 114 13 34168498 34168516 TGATAAGCGATGAGCATGG 59 34168142 34168421 GGTACATATTTGTTGCCAGC 59 NA Mus musculus 50 Olfr498 ENSMUSG00000058679 ENSMUST00000074787 1 1 1 60 7 115609415 115609433 TTCTGATGTCACTGTTGCT 59 115609457 115609475 TGTCAGTGTGATAAAGCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 NM_146289.1 ENSMUSG00000059219 ENSMUST00000081181 2 1 1 60 17 37712001 37712021 ACAGTGATGTCATATGATCGG 59 37711961 37711982 TGATGACTTCATAGTGAAGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 R74862 ENSMUSG00000059277 ENSMUST00000072468 3 1 1 90 7 150223246 150223264 GTTAAAGATGTGAGCTCGC 58 150219820 150223192 CTCTGGAAACATCGTTCCA 59 NA Mus musculus 50 4930473A02Rik ENSMUSG00000060029 ENSMUST00000079964 1 1 1 81 2 130370797 130377888 GTCCATTCTGAGGGTTCTG 59 130370734 130370752 ACACGATTGAGGACTTCTG 59 NA InUTR Mus musculus 50 Gmfb ENSMUSG00000062014 ENSMUST00000111817 3 1 2 112 14 47435881 47435900 AAGATTGACAAGGATGAACG 58 47434648 47435278 CTATACACAATGAAGCGAGG 58 NA Mus musculus 50 V1re4 ENSMUSG00000062165 ENSMUST00000077001 3 1 1 60 17 21050697 21050717 CATCTACCAAGACGAATAGCA 59 21050657 21050678 GAATGGCAGAATTCAGAATCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1386 ENSMUSG00000062285 ENSMUST00000071905 3 1 1 67 11 49283801 49283819 CCGAATAGACCTTCGACTG 59 49283850 49283868 AGAGGTCCAGAAAGGAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp398 ENSMUSG00000062519 ENSMUST00000079881 1 1 2 163 6 47790621 47790642 CAGGTATTAAAGGAGATATCCC 57 47809047 47809428 CATGGCATAATCCATGGAG 57 NA Mus musculus 50 Zfp35 ENSMUSG00000063281 ENSMUST00000074941 1 1 1 80 18 24148881 24161158 CTTTCTGTCAGATGGTGAG 57 24161202 24161220 ACTGTTCCAATCTTTCCTG 57 NA Mus musculus 50 Nhp2l1 ENSMUSG00000063480 ENSMUST00000080622 3 1 1 272 15 81872162 81872181 AATGTTACTGACACTGAGGA 58 81871909 81871928 GTTCCACAATAAGACATCCC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Tas2r129 ENSMUSG00000063762 ENSMUST00000070991 1 1 1 60 6 132901694 132901712 TTACACTTTCCCAGTCCAC 59 132901735 132901754 TTCTTGTAATGTCTCCACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr120 ENSMUSG00000063994 ENSMUST00000077498 2 1 1 60 17 37863753 37863773 ATCTATTACCTACTTGAGGCC 58 37863793 37863813 GGCCAAGAGTTTATCTATTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Klk8 ENSMUSG00000064023 ENSMUST00000085461 3 1 1 132 7 51054574 51054592 ATTCGACTGCAGAACTCAG 59 51054688 51057458 GAAAGTTCTCTTGAGGGCT 59 NA Mus musculus 50 Defcr24 ENSMUSG00000064213 ENSMUST00000080533 1 1 1 157 8 22845168 22845748 CTTCAAGAGGAATCATTGAGAG 58 22845866 22845884 ACTCATGGTCATCTTGTCC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 EG665536 ENSMUSG00000065968 ENSMUST00000090305 3 1 1 145 16 13983701 13983719 TCTAGGGACAGGAAGATGG 59 13982077 13983592 GGGTAGAAGCTTCTAGTGG 58 NA Mus musculus 50 Trim12 ENSMUSG00000066258 ENSMUST00000106839,ENSMUST00000070943 1 2 3 224 7 111455535 111455553 GACATGGAAAGAAACTCCA 57 111452900 111454531 TCTCCCAGTAAGTTCTATCC 57 NA DesignNoJunction Mus musculus 50 Serpina3c ENSMUSG00000066361 ENSMUST00000085050 2 1 1 103 12 105385626 105386534 TAGTGTCTCAGATGGTCCA 59 105385541 105385562 GGTTCTTCTACTAAGAATGCGA 59 NA Mus musculus 50 Hmcn1 ENSMUSG00000066842 ENSMUST00000097545 3 1 2 78 1 152723612 152839918 TCCAGAAATTGGTCCAGTG 59 152723552 152723571 CACCTGAACATACAGTTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1425 ENSMUSG00000067526 ENSMUST00000087828 1 1 1 70 19 12148249 12148267 ACACTCTAAGGAACCAGGA 59 12148197 12148216 CCAATAAGAAGGTCCAAGTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Nnat ENSMUSG00000067786 ENSMUST00000109526,ENSMUST00000088485 2 2 3 80 2 157386958 157386976 GAATGCTGCATTTACTGGG 59 157387020 157387286 CCTGAACACCTCACTTCTC 59 NA Mus musculus 50 1200003I07Rik ENSMUSG00000068134 ENSMUST00000109931,ENSMUST00000094538 2 2 3 69 2 149945602 149945621 TCTCAGAAGGATCTCTACAG 57 149943928 149945570 CTTTCATGCCTATAGCAGC 58 NA DesignRelaxed Mus musculus 50 Olfr1278 ENSMUSG00000068647 ENSMUST00000090330 1 1 1 60 2 111132669 111132689 GATTTCTGATCTGTCTTCTGG 58 111132711 111132729 TATCTGGAAGACACAACCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 7420416P09Rik ENSMUSG00000071235 ENSMUST00000095551 3 1 1 60 12 85991590 85991608 CTCCACCTACTACATGTGG 58 85991632 85991650 TCAGCCATCAATCAGTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 V1rh7 ENSMUSG00000071495 ENSMUST00000076012 3 1 1 69 13 22712255 22712274 CATGTCCTCTTCCTTCAGAG 59 22712205 22712223 TACTTTGAGCAGCTCTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000072688 ENSMUSG00000072688 ENSMUST00000100834 2 1 1 127 5 117769052 117769070 CTTGTCATCTGGGTTCTCC 59 117768943 117768961 CAAGTTCATTCGAGAACCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 C030034I22Rik ENSMUSG00000073374 ENSMUST00000097289 3 1 1 62 17 69767382 69767400 ATTCGACCGAATAGCACAG 59 69767425 69767444 TCCAGATGATGAATGCTACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073430 ENSMUSG00000073430 ENSMUST00000097363 2 1 1 62 17 27480564 27480582 CATTGGTTCATGAGTGCTG 59 27480607 27480626 GAAGTGGCAAATACCAAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tns1 ENSMUSG00000073651 ENSMUST00000050681 1 1 1 97 1 74041791 74041809 AGATGTTGAAGTCCAAGCA 59 74038785 74039743 GAATTCCAGGACCTTAGCA 58 NA Mus musculus 50 Pex10 ENSMUSG00000073686 ENSMUST00000097750 3 1 1 248 4 154417485 154417504 CTCTTTCTGCAAAGATGCAC 59 154417715 154417733 CTGGTCTTGGGACTTTCAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 ENSMUSG00000074231 ENSMUSG00000074231 ENSMUST00000098610 1 1 1 107 9 66953809 66953827 ATGACCTCATCAGAAACGG 59 66954563 66954581 TTCCAGAATTCCTCGTGAG 58 NA DesignNoJunction Mus musculus 50 EG667283 ENSMUSG00000074322 ENSMUST00000098736 2 1 1 71 7 21554991 21556783 GAGGCTCAGAAGATTTCCC 59 21556818 21556836 AAGTACCATGGAGACACTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Defcr-rs1 ENSMUSG00000074437 ENSMUST00000098890 1 1 1 163 8 22465841 22466485 TAGCCCAAAGAAGGTTTCC 59 22465696 22465714 TGTATTTGGAGCTTGGGTG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000016394 ENSMUSG00000074507 ENSMUST00000098982 1 1 1 60 2 180558980 180558999 TGTGAAGAGGTGATGAATCC 59 180554564 180554583 GTATCCATGATTGCAGACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tox2 ENSMUSG00000074607 ENSMUST00000109428 1 1 3 101 2 163028973 163028991 ACCTGGACTACTACCACTG 59 163073560 163101714 TGTTATAGGTCTGGCTGGT 59 NA Mus musculus 50 Tox2 ENSMUSG00000074607 ENSMUST00000109428,ENSMUST00000099110 1 2 3 180 2 163073561 163101715 CCAGCCAGACCTATAACAG 59 163101859 163101877 ATTGCTTGGTACGAGTAGG 59 NA Mus musculus 50 Gm1527 ENSMUSG00000074655 ENSMUST00000099170 3 1 1 83 3 28801221 28802303 CCTGTGACAGTACTTTATCTG 57 28802347 28802366 TTCTTATCATTGGTAGCAGC 57 NA Mus musculus 50 ENSMUSG00000074847 ENSMUSG00000074847 ENSMUST00000099425 3 1 1 94 13 65361434 65361452 CTCCTCAGGAATGACATCC 59 65361510 65361528 AAAGATTCAGAGAAGCTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 6720457D02Rik ENSMUSG00000074865 ENSMUST00000082203 1 1 1 80 13 62620080 62621539 CACAGAAGGTGTGAAAGGA 59 62620018 62620036 AGCAGATAAAGCAAAGGCT 59 NA Mus musculus 50 Cyp2c68 ENSMUSG00000074882 ENSMUST00000099472 2 1 1 60 19 39786930 39786948 GATGAGATTTGCTCTCCTG 57 39777993 39786906 TTCCTGGACTTTAGCTGTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000074919 ENSMUSG00000074919 ENSMUST00000099552 2 1 1 220 10 76475124 76479404 AGAATAAGAGCACCTTGCT 58 76483998 76484016 TTAGACAGAAGGAACCAGC 58 NA DesignNoJunction, InUTR Mus musculus 50 Olfr1179 ENSMUSG00000075127 ENSMUST00000099825 3 1 1 60 2 88242886 88242905 ATTACCTTGCTTTGTCAGAC 58 88242845 88242863 TCAGTGAGAAACTTGGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2610036L11Rik ENSMUSG00000075266 ENSMUST00000099985 1 1 1 83 10 29918327 29918345 AAGAGTCCAGGACAAATGC 59 29917023 29918281 TCAGAATTACCTTTCCTGCA 58 NA Nonspecific Mus musculus 50 Gm1968 ENSMUSG00000075286 ENSMUST00000100016 2 1 1 98 16 29958871 29958890 CAGAATCACCCATAACTCCA 59 29958695 29958810 CAGCTAGGACATCAGAGTG 59 NA Mus musculus 50 Dio3 ENSMUSG00000075707 ENSMUST00000097228 3 1 1 60 12 111518129 111518148 AGAGTACTACAACAAGGTGC 59 111518171 111518189 TAGAGTTGGCCATAGTGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ass1 ENSMUSG00000076441 ENSMUST00000102840 2 1 1 60 2 31365754 31370209 ATACACAGGTTTCTGGCAC 59 31370233 31370251 GGACTTCTGGATACAGTGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 IGKV1-133 ENSMUSG00000076503 ENSMUST00000103304 2 1 1 205 6 67674944 67675348 CTCTGGATTCAGGAAACCA 58 67675517 67675535 GAGTCCAGTTTAGACACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV12-89 ENSMUSG00000076534 ENSMUST00000103335 1 1 1 85 6 68785131 68785273 TGTGGCTTACAGTTGTCAG 59 68785064 68785082 GATGGTGACAGTTTCTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV6-32 ENSMUSG00000076576 ENSMUST00000103377 1 1 1 60 6 70024540 70024560 GTCTTCGTATTTCTACTGCTC 58 70024286 70024305 TCTGGGTCATCACAATACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHA ENSMUSG00000076610 ENSMUST00000103411,ENSMUST00000103412 1 2 2 114 12 114497362 114497586 ATCACAGTGAACACCTTCC 59 114497266 114497284 CTTTAGGGTTGAAAGCTCG 58 NA DesignNoJunction Mus musculus 50 IGHV5-4 ENSMUSG00000076635 ENSMUST00000103444 2 1 1 64 12 114835755 114835775 TATCCAGACAATGTAAAGGGC 59 114835711 114835729 AGGTACAGGTTGTTCTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-56 ENSMUSG00000076718 ENSMUST00000103527 2 1 1 96 12 116481211 116481229 CTATACCTTCACCAGCCAC 59 116481133 116481151 AGTACTACCACTTCCAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 3100002L24Rik ENSMUSG00000078903 ENSMUST00000109062,ENSMUST00000109063 3 2 10 95 2 174957009 174957028 ATCTCCGAATGCATAATCGA 59 174955087 174956951 TATATTTGGAGGCCATCCT 57 NA DesignRelaxed Mus musculus 50 Pms2 ENSMUSG00000079109 ENSMUST00000110709 2 1 3 67 5 144680442 144680460 TTCTTCATCAATCAGAGGC 57 144682897 144682918 ACATGTGATACCTCATTGAC 57 NA DesignRelaxed Mus musculus 50 ENSMUSG00000072740 ENSMUSG00000079402 ENSMUST00000112801 1 1 1 81 14 3773294 3773314 CAATGACATGGAGGAAATGTG 59 3773354 3774328 GTTGAATTCAGTGTTCATCCTG 59 NA Nonspecific Mus musculus 50 Ctsf ENSMUSG00000079865 ENSMUST00000115980 1 1 1 83 19 4858010 4858028 ACGAGCACAGAAGATTCAG 59 4858075 4858196 AATTCCTCCTCTGTGAGGT 59 NA Nonspecific Mus musculus 50 Scml2 ENSMUSG00000000037 ENSMUST00000074802,ENSMUST00000112345,ENSMUST00000112342 2 3 8 64 X 157672621 157675434 AATGCCAGCTCTTAGTGTG 59 157675462 157675480 ACTTTGGTTGTTCAGAGGA 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Blvra ENSMUSG00000001999 ENSMUST00000002064,ENSMUST00000099411,ENSMUST00000110389 2 3 3 80 2 126906386 126908677 AGTACTGAGCCAAAGAGGA 59 126908719 126908739 CTTCAAGTCCCTTATCCTCAC 59 NA Mus musculus 50 Trappc6a ENSMUSG00000002043 ENSMUST00000108455,ENSMUST00000108456,ENSMUST00000002112 1 3 3 156 7 20099806 20099824 TAGATGCCCTCAAGTTCCT 59 20100411 20100429 TCCTCTAGATACTGTGGCC 59 NA DesignNoJunction Mus musculus 50 Cugbp2 ENSMUSG00000002107 ENSMUST00000002176,ENSMUST00000114934 1 2 5 108 2 6475005 6481729 AATGCACTAGCAGGTATGG 59 6474915 6474933 GAATTCCTGAGTAGGCCTG 59 NA Nonspecific Mus musculus 50 Irf9 ENSMUSG00000002325 ENSMUST00000002396,ENSMUST00000053473 1 2 2 80 14 56226683 56227530 TTCTGTAGAGATTTGGCCC 58 56227574 56227592 CTCCTCCCAGAAATGTAGG 58 NA Mus musculus 50 Braf ENSMUSG00000002413 ENSMUST00000002487 2 1 2 81 6 39601613 39601631 AAACACAATTGAGCCTGTG 58 39598468 39598822 CTGGTCTCTAATCAAATCCCT 58 NA Mus musculus 50 Cd97 ENSMUSG00000002885 ENSMUST00000002964 3 1 3 82 8 86257363 86257382 TGTAACCTGGGATATAAGCT 57 86253412 86257318 CACTCATCCACATCTTGAC 57 NA Mus musculus 50 Rab3b ENSMUSG00000003411 ENSMUST00000106650,ENSMUST00000003502 2 2 3 90 4 108602055 108602073 CGTGGGAAATAAGTGTGAC 58 108602127 108613244 AAAGAAGTCAAACCCAAGC 58 NA Mus musculus 50 Pex19 ENSMUSG00000003464 ENSMUST00000075895,ENSMUST00000111252 3 2 2 96 1 174063425 174064136 TCTCATGCAGCAGTTACAG 59 174064358 174064376 CAGATTGAGAGCATCCAGG 59 NA Mus musculus 50 1700019E19Rik ENSMUSG00000007867 ENSMUST00000110215,ENSMUST00000077560 3 2 3 111 12 87479763 87481007 AAGAGATGGAAGATCACCG 58 87502134 87502153 TGTAGCACAAAGTCTTCCTC 59 NA Mus musculus 50 Crlf1 ENSMUSG00000007888 ENSMUST00000008032 2 1 2 60 8 73023085 73023106 TCTTACATACCAACTACTCCCT 59 73023234 73023252 CATGTGTTATCCTGACCGT 59 NA DesignNoJunction Mus musculus 50 Pgam1 ENSMUSG00000011752 ENSMUST00000011896 1 1 1 78 19 41991295 41991313 ATCGTTAAGCATCTGGAGG 59 41992137 41992155 CATAGACGATAGGGATGCC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Camta1 ENSMUSG00000014592 ENSMUST00000049790,ENSMUST00000105668 2 2 6 82 4 150449388 150450697 ATAGCCTTGAAGTATGCAC 57 150449324 150449342 TGCTCATAGTAACTTCGGA 57 NA Mus musculus 50 Msh3 ENSMUSG00000014850 ENSMUST00000022220 3 1 3 82 13 93026697 93026716 ATCACCTAGCAACTGTTGAC 59 93019878 93026652 TTCTTGTAGAGTTGGCCTG 59 NA Mus musculus 50 Svs3a ENSMUSG00000017003 ENSMUST00000109370,ENSMUST00000017147 3 2 2 82 2 164116071 164116902 AGACACATTTAGAGGAGTCAC 59 164116945 164116964 CAAGGTGTTGAGGACTAGAG 59 NA InUTR Mus musculus 50 Cadps2 ENSMUSG00000017978 ENSMUST00000115356 2 1 8 167 6 23360881 23360899 TTAGATGAGTACTGTGCCC 58 23360033 23360750 AGAAAGAAATCTGTTGCCG 58 NA Mus musculus 50 Pmp22 ENSMUSG00000018217 ENSMUST00000108702,ENSMUST00000018361,ENSMUST00000108701,ENSMUST00000108700 3 4 4 62 11 62948003 62948021 CTACTCCTCATCAGTGAGC 58 62964645 62964663 ATGACAGACAGGATCATGG 58 NA DesignNoJunction Mus musculus 50 Rai12 ENSMUSG00000018565 ENSMUST00000108595,ENSMUST00000108594,ENSMUST00000018709 2 3 3 81 11 69788587 69788606 TCACATTCCCTGTGTTACAC 59 69784228 69788545 TACTAGGGAGTTATCACCTGG 59 NA Mus musculus 50 Cog1 ENSMUSG00000018661 ENSMUST00000106623,ENSMUST00000018805 3 2 3 87 11 113513324 113513342 TCTAACTCCAGATACAGCC 57 113513393 113513549 AAATAGTTGACCGGAAGTG 57 NA Mus musculus 50 Zwint ENSMUSG00000019923 ENSMUST00000020081,ENSMUST00000105431 1 2 2 160 10 72118810 72118992 GAGTTTATGAGGAACTCGC 57 72119284 72119302 TCCTTAGTTTCAGTTGCCT 58 NA Mus musculus 50 Med23 ENSMUSG00000019984 ENSMUST00000092646 2 1 2 81 10 24602390 24602409 AGATATGTACTGGAGCAACC 58 24602453 24603025 GAGCAATGTTCAAGGTCTG 58 NA Mus musculus 50 Papolg ENSMUSG00000020273 ENSMUST00000020513,ENSMUST00000102863 2 2 2 82 11 23785564 23790241 CAGTGAAAGTAAGAATCTCCCA 59 23785503 23785521 CTCCAAGCCTGTAAGATCC 59 NA Mus musculus 50 Hormad2 ENSMUSG00000020419 ENSMUST00000109948,ENSMUST00000109949 2 2 4 125 11 4327344 4327363 CAAATGAGCATGAGTCACTG 59 4324814 4327256 AACTGAGGTCATCCAAACG 59 NA Mus musculus 50 1700086D15Rik ENSMUSG00000020548 ENSMUST00000108696,ENSMUST00000020855 2 2 2 101 11 64966496 64966514 GATGCTCATTGAGGATCGT 59 64966131 64966431 TCTCTTTCTGCTGAAGCTC 59 NA Mus musculus 50 Hnf1b ENSMUSG00000020679 ENSMUST00000021016,ENSMUST00000108113 2 2 3 175 11 83669446 83669464 ATGCAACAGCACAATATCC 58 83669603 83675233 ACTGTCTGGTTGAACTGTC 59 NA Mus musculus 50 Tlk2 ENSMUSG00000020694 ENSMUST00000106942 3 1 6 99 11 105082582 105082601 TCATGTCAGTGATGTTAGCA 59 105082662 105102896 ATTGTGAGGTCAGAAGAGAC 59 NA Mus musculus 50 Grin2c ENSMUSG00000020734 ENSMUST00000019007,ENSMUST00000106554,ENSMUST00000003351 2 3 3 89 11 115117057 115117075 CTACGACTTGTACCTGGTG 59 115116727 115117005 CGCTTGTAGTATACCTCACC 59 NA Mus musculus 50 Rabep1 ENSMUSG00000020817 ENSMUST00000108533 3 1 4 81 11 70707182 70713980 GCCTCAAAGGTTGTTAAGG 58 70714025 70714043 CAGCTACGTACATCTCCAG 59 NA Mus musculus 50 Abcc3 ENSMUSG00000020865 ENSMUST00000107806,ENSMUST00000021231 1 2 2 80 11 94216424 94218300 CCTATGCCTTACAGGTGAC 59 94216362 94216384 CCACAGCTATGATATTAGACTCC 59 NA Mus musculus 50 Cast ENSMUSG00000021585 ENSMUST00000072276,ENSMUST00000109612 3 2 5 95 13 74886300 74891767 GAGACTAAGGCAATTCCAG 57 74885662 74885681 TTGTGGTTTCTTAGACTCTG 57 NA Mus musculus 50 Scel ENSMUSG00000022123 ENSMUST00000095576,ENSMUST00000110762 1 2 3 92 14 103959541 103961695 ACTAATAGGCAGATACATGCAG 59 103964000 103964018 GTCATCGAGATCCTCAGTC 58 NA Mus musculus 50 Tmem44 ENSMUSG00000022537 ENSMUST00000089775,ENSMUST00000023188,ENSMUST00000054524,ENSMUST00000089774 3 4 4 81 16 30540874 30540892 CTGAATACCTCCTTCAGGC 59 30539611 30540831 GACAGAAAGATGATAGCAAGG 58 NA Mus musculus 50 Rabl2a ENSMUSG00000022621 ENSMUST00000094056 2 1 3 98 15 89414428 89414782 GGTACCTGCAGACATACAG 59 89414348 89414366 ACATTGGTACCATCAGCAG 59 NA Mus musculus 50 Tmem41a ENSMUSG00000022856 ENSMUST00000023562,ENSMUST00000023563 2 2 2 83 16 21937106 21937124 CTGGTTCTTGAACCTCTCG 59 21935106 21937060 TAAGGGATCAAACCGATGAG 59 NA Mus musculus 50 Fhl1 ENSMUSG00000023092 ENSMUST00000023854,ENSMUST00000116596,ENSMUST00000114773,ENSMUST00000114772,ENSMUST00000114770 1 5 8 80 X 54043757 54043775 GTATTACTGCGTGGATTGC 58 54043819 54045030 TTACCAAACCCAGTGATGG 59 NA Mus musculus 50 Serping1 ENSMUSG00000023224 ENSMUST00000111642,ENSMUST00000023994 2 2 3 98 2 84605974 84607442 GGAGAAACTGGAATTCTTTGAC 59 84605897 84605915 ACTGTCTCGTGTTTCATGG 59 NA Mus musculus 50 Centg3 ENSMUSG00000023353 ENSMUST00000024123 2 1 2 92 5 23993632 23993651 AATCCTTGAACAAGGAGTGG 59 23993706 23998788 TTTGCATGTAATCGTGCAG 59 NA Mus musculus 50 Tmem173 ENSMUSG00000024349 ENSMUST00000025207,ENSMUST00000115728 2 2 2 93 18 35895767 35898348 GTTGATCTTACCAGGGCTC 59 35895692 35895710 GATGTACAGTCTTCGGCTC 59 NA Mus musculus 50 Cd6 ENSMUSG00000024670 ENSMUST00000039043 1 1 4 192 19 10865933 10868639 CAAAGAAGATTCCCAGCGA 59 10865554 10865572 ATCACTGTTGTTCCTCACG 59 NA Mus musculus 50 Ddb1 ENSMUSG00000024740 ENSMUST00000025649 3 1 2 81 19 10688674 10689352 TCGTAAAGCTCAATGTCGA 59 10689396 10689415 ACAATGGGTCCTAAATTGGT 59 NA Mus musculus 50 Ltbp3 ENSMUSG00000024940 ENSMUST00000076366 2 1 2 80 19 5753984 5754003 CAATGGTTCCTACAGATGTC 57 5754043 5755558 CACTCATCTATATCTACTTGGC 57 NA Mus musculus 50 Sf1 ENSMUSG00000024949 ENSMUST00000113487,ENSMUST00000113485,ENSMUST00000076351 2 3 4 239 19 6374053 6374071 CTGGTCCTTCAGAGAATCG 59 6374274 6374557 GGTACTGATCCATTGGAGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Apex2 ENSMUSG00000025269 ENSMUST00000112725,ENSMUST00000112727,ENSMUST00000112720,ENSMUST00000026303,ENSMUST00000112719 3 5 6 99 X 147020578 147021593 CTATTCTGGTGTGGCTACC 59 147020497 147020516 ACCAATATCTCCATTCAGGG 58 NA Mus musculus 50 4933436I01Rik ENSMUSG00000025288 ENSMUST00000026325 1 1 1 60 X 65173999 65174017 TACCTGATGGAGTGAAGAC 57 65173957 65173975 TTTCTGTTCTTGTGCATCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mbc2 ENSMUSG00000025366 ENSMUST00000026427 2 1 2 85 10 127948621 127948722 GTTCAATGAGCGGTTTGAG 59 127948554 127948572 AGGAGGAGTTTGACTTCAC 58 NA Mus musculus 50 Pfkfb4 ENSMUSG00000025648 ENSMUST00000026738 2 1 3 125 9 108919630 108927570 GAATTCAAAGGCGTCTGTG 59 108927659 108930045 GTCTTCATAGGACTCACCC 58 NA Mus musculus 50 D3Ertd751e ENSMUSG00000025766 ENSMUST00000108065,ENSMUST00000026867,ENSMUST00000026868 3 3 3 176 3 41550484 41550502 CGAATACACTTGGGATGGT 59 41550639 41552604 GCTTCCACAACTTCATAATTCC 59 NA Mus musculus 50 Dst ENSMUSG00000026131 ENSMUST00000097785,ENSMUST00000097786,ENSMUST00000097789 1 3 8 80 1 34352317 34352335 AGGTAGCCAAGTGTAAGTG 58 34352379 34353602 GATTTCCCAGGAAGAACCT 58 NA Mus musculus 50 Zfp142 ENSMUSG00000026135 ENSMUST00000113739,ENSMUST00000027315 2 2 5 81 1 74632006 74632025 GAACATGGAGATCATTGTGG 58 74626488 74631962 CTTTACCAGGACACCTGAG 59 NA Mus musculus 50 Plcd4 ENSMUSG00000026173 ENSMUST00000067916,ENSMUST00000113750 3 2 7 121 1 74611744 74611870 GTATGAAACAAGAGATGGCAC 59 74612332 74612350 AGATTGTTCTTCAAGGCCC 59 NA Mus musculus 50 Chrng ENSMUSG00000026253 ENSMUST00000027470 3 1 2 115 1 89104013 89104031 CGACGGTTGTATCTACTGG 59 89104110 89104793 AAGTCTGGGATTGGAAGAC 58 NA Mus musculus 50 Gpr39 ENSMUSG00000026343 ENSMUST00000027581 3 1 1 60 1 127574332 127574353 CCTTCAAGTATAAAGCAGTGTC 59 127574374 127574392 CATACAAAGCCAATCAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rsu1 ENSMUSG00000026727 ENSMUST00000028059 2 1 2 120 2 13146047 13163384 AACAAGCTAACAACTGTGC 58 13145945 13145963 GTTTGAGTTTCTGGAGGCT 59 NA Mus musculus 50 Prkcq ENSMUSG00000026778 ENSMUST00000102970,ENSMUST00000028118 3 2 3 87 2 11201142 11205377 GGAATTGTCTACAGGGACC 59 11205428 11205446 CTTTGCACATCCCAAAGTC 59 NA Mus musculus 50 1700007K13Rik ENSMUSG00000026831 ENSMUST00000113912,ENSMUST00000086370,ENSMUST00000028174 3 3 3 128 2 28320697 28320715 TGTACAGGACCAGTAACCA 59 28317885 28317904 TATGACTCTGGAACATTCCA 58 NA DesignNoJunction Mus musculus 50 Gapvd1 ENSMUSG00000026867 ENSMUST00000102800,ENSMUST00000113111,ENSMUST00000028224,ENSMUST00000113099,ENSMUST00000113109 3 5 7 81 2 34555416 34556290 GCCTAAAGCTCCTATACCA 58 34555353 34555371 TGTTGAGAATCTGTCAGGA 57 NA Mus musculus 50 Slc12a1 ENSMUSG00000027202 ENSMUST00000110494 1 1 3 80 2 124991312 124995152 GATATGTCAGAGGAGGTGG 58 124995196 124995214 AGATCAAGCCTATTGACCC 58 NA Mus musculus 50 Arhgap1 ENSMUSG00000027247 ENSMUST00000111329,ENSMUST00000111331,ENSMUST00000070873,ENSMUST00000090614,ENSMUST00000111330 2 5 5 123 2 91510714 91510875 CTTCCTGGTGCAGATATCTG 59 91510961 91510979 ATTGATAGCCTTGAGGGTG 59 NA Mus musculus 50 Snap25 ENSMUSG00000027273 ENSMUST00000028727,ENSMUST00000110098 1 2 2 140 2 136595596 136599649 AGCTTAAATCCAGTGATGCT 59 136599752 136603085 CATCATTTGTTACCCTGCG 59 NA Mus musculus 50 Trpm7 ENSMUSG00000027365 ENSMUST00000110401 2 1 3 85 2 126622905 126622923 AGAAGAGATCATGCTAGCC 58 126622176 126622856 CCCGAGTTTCTTGTAAGTC 57 NA Mus musculus 50 Sall4 ENSMUSG00000027547 ENSMUST00000075044,ENSMUST00000103074,ENSMUST00000029061,ENSMUST00000109167 2 4 5 127 2 168578051 168578069 GAAAGAACTTCTCGTCTGC 58 168575949 168577961 CATGTAGTGTACCTTCAGGT 58 NA InUTR Mus musculus 50 Ncoa3 ENSMUSG00000027678 ENSMUST00000109252,ENSMUST00000088095,ENSMUST00000099082 1 3 3 80 2 165894039 165894713 GCAAATTACGGAATGGGAC 59 165894756 165894775 TCTTGATGACATCATTGCAC 58 NA Mus musculus 50 Postn ENSMUSG00000027750 ENSMUST00000073012 2 1 4 80 3 54181514 54187315 CCATGACTGTCTATAGACCTG 59 54187356 54187375 TTTCGCCTTCTTTAATCAGC 58 NA Mus musculus 50 Veph1 ENSMUSG00000027831 ENSMUST00000029419 2 1 2 80 3 65962224 65963165 CATTAGATTTAGCAGGTCCAG 58 65962164 65962182 TCGACTTCGTTATCTTCCA 58 NA Mus musculus 50 Vcam1 ENSMUSG00000027962 ENSMUST00000029574 1 1 2 97 3 115820453 115823725 GAGGTCTACTCATTCCCTG 58 115820374 115820392 TACACATTAGGGACTGTGC 58 NA Mus musculus 50 Asph ENSMUSG00000028207 ENSMUST00000108335,ENSMUST00000098276 3 2 17 127 4 9531761 9563052 ATTAGACCTTGAAGCAGATGG 59 9529640 9531674 CCTCGATTTCTTCATGAACTG 59 NA Mus musculus 50 Cdh17 ENSMUSG00000028217 ENSMUST00000029871,ENSMUST00000108303 1 2 2 80 4 11731257 11734584 CCTGACTGTGAGTTATTCAC 57 11734625 11734645 GCACTAAATATCTCACCAGTG 58 NA Mus musculus 50 Anp32b ENSMUSG00000028333 ENSMUST00000072244 1 1 2 165 4 46482897 46482917 CTTCCCTATCTGTGTAAAGAC 57 46485011 46485155 ATTCTTTGGCTCTTCTCCT 58 NA Mus musculus 50 2310039E09Rik ENSMUSG00000028348 ENSMUST00000030033,ENSMUST00000107701 3 2 2 60 4 48676742 48676760 CTACGTTGTCAACAAGCTG 59 48676784 48676802 GACATCCTTAATGTGAGCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc107 ENSMUSG00000028461 ENSMUST00000030181,ENSMUST00000107922 3 2 2 149 4 43508107 43508125 AGAAGAAATCCTCGCAGTC 59 43508400 43508418 CTAGAAGTTCCCTCTGGGT 59 NA DesignNoJunction Mus musculus 50 Mier1 ENSMUSG00000028522 ENSMUST00000097945 3 1 6 81 4 102790878 102790896 GTTTACAGACTGTCTCTGG 57 102799897 102801959 CACTTATATTCACCCTGGAC 57 NA Mus musculus 50 Slc5a9 ENSMUSG00000028544 ENSMUST00000102721,ENSMUST00000102720,ENSMUST00000102719 2 3 4 114 4 111571164 111571182 TGTCTTTGTTCTTGCTGTG 58 111566276 111568889 TAGAGATGCTCCAATTGGC 59 NA Mus musculus 50 Slc5a9 ENSMUSG00000028544 ENSMUST00000102721,ENSMUST00000102720,ENSMUST00000102719 2 3 4 114 4 111571164 111571182 TGTCTTTGTTCTTGCTGTG 58 111566276 111568889 TAGAGATGCTCCAATTGGC 59 NA Mus musculus 50 Osbpl9 ENSMUSG00000028559 ENSMUST00000030288,ENSMUST00000084365,ENSMUST00000084366 2 3 4 85 4 108755750 108755770 TACTCTAGCAGTGAAGATGAG 58 108745746 108755705 CCAGAAGAATCTATTAAGCGC 58 NA Mus musculus 50 Kif17 ENSMUSG00000028758 ENSMUST00000105818,ENSMUST00000105821,ENSMUST00000105819 2 3 5 120 4 137849848 137849866 CCCAGATCCCATCATACTG 58 137852172 137857178 GTGAGTTGTGATATGCATGTG 59 NA Mus musculus 50 Tmem54 ENSMUSG00000028786 ENSMUST00000030577,ENSMUST00000106064 1 2 3 91 4 128785641 128787629 CCATTGTGGTCATTGTTGC 59 128787779 128787797 ACTCAAGCTAAACACGGTC 59 NA Mus musculus 50 Trim63 ENSMUSG00000028834 ENSMUST00000105875 1 1 2 132 4 133881579 133881597 TAGAACACATAGCAGAGGC 58 133883687 133884829 CATTGGTGTTCTTCTTTACCC 59 NA Mus musculus 50 Trspap1 ENSMUSG00000028898 ENSMUST00000105962 1 1 5 81 4 131877642 131877662 GTTCTTTGTCAAAGTCTACCC 58 131870270 131877599 CTTTACCCGGCTCTTAGAC 59 NA Mus musculus 50 Park7 ENSMUSG00000028964 ENSMUST00000105675,ENSMUST00000030805,ENSMUST00000105674,ENSMUST00000105676,ENSMUST00000105673,ENSMUST00000105677 3 6 6 99 4 150271571 150275125 TGAATGGCAGTCACTACAG 59 150271490 150271508 GCTAGTGCAAACTCAAAGC 59 NA Mus musculus 50 Mthfr ENSMUSG00000029009 ENSMUST00000097788,ENSMUST00000069604 3 2 2 83 4 147422361 147425484 ATCTTCCCTATTCAGGGCT 59 147425529 147425549 TACATCCTTGATCTTCTGTGG 59 NA Mus musculus 50 Zcchc4 ENSMUSG00000029179 ENSMUST00000113901,ENSMUST00000031077,ENSMUST00000113904 2 3 3 83 5 53195676 53198199 TTCTTTGATGGAAAGGCTG 57 53198246 53198264 GTCTGTCACCATAATCACC 57 NA Mus musculus 50 Fip1l1 ENSMUSG00000029227 ENSMUST00000113536,ENSMUST00000113534 3 2 4 94 5 74960644 74967137 GATCTAAGGAGATTACCTGGAG 58 74967192 74967210 TTGCTGTTCTCATTTGCAC 59 NA Mus musculus 50 Gfi1 ENSMUSG00000029275 ENSMUST00000065478,ENSMUST00000031205 1 2 2 140 5 108149183 108149201 TATCCCTGTCAGTACTGTG 57 108146870 108146888 ATGAGTGATGAGGTTGGAG 58 NA DesignNoJunction Mus musculus 50 Hnrpdl ENSMUSG00000029328 ENSMUST00000086900,ENSMUST00000031271 1 2 2 215 5 100466639 100466657 TCTTTGTGGGTGGATTGAG 59 100465983 100466109 CTTTGATTTCGCACTTCCC 59 NA DesignRelaxed Mus musculus 50 Wsb2 ENSMUSG00000029364 ENSMUST00000031309,ENSMUST00000111959 2 2 2 130 5 117824213 117825786 GGAGAAGTCGGTCTTTCTG 59 117825880 117825898 TGTCATACGAAGCTGTGAC 59 NA Mus musculus 50 4930434E21Rik ENSMUSG00000029658 ENSMUST00000110502,ENSMUST00000085533 1 2 3 170 5 150369030 150376568 ACAACACAGTCAAGGTCTG 59 150376702 150381633 CAGATCCCACTTTCAGGTG 59 NA Mus musculus 50 Cpa5 ENSMUSG00000029788 ENSMUST00000062758,ENSMUST00000115139 1 2 2 80 6 30580415 30580433 CACAGCTACTCTCAGATGG 59 30580476 30580787 AAGATTGAACAGCTCTTCGT 59 NA Mus musculus 50 Cnbp ENSMUSG00000030057 ENSMUST00000113619,ENSMUST00000032138 2 2 2 80 6 87795164 87795183 CAGAAGTGCTATTCTTGTGG 58 87794138 87795122 AGTTTCACCACACCTATAGC 59 NA Mus musculus 50 Foxp1 ENSMUSG00000030067 ENSMUST00000113326,ENSMUST00000113328,ENSMUST00000113324,ENSMUST00000113322,ENSMUST00000074346 1 5 10 80 6 98889776 98891541 AAAGATCAGTGGTAACCCT 57 98889714 98889732 TGTAAAGCTGCATTGAGAG 57 NA Mus musculus 50 Mtmr14 ENSMUSG00000030269 ENSMUST00000113146,ENSMUST00000032403,ENSMUST00000042548 2 3 3 80 6 113204133 113205816 CTTTGTTCTTCGGAGTGGT 59 113205859 113205878 ACTGACAGGTATTGAAGCAG 59 NA Mus musculus 50 Cd22 ENSMUSG00000030577 ENSMUST00000019248,ENSMUST00000108125,ENSMUST00000108123 1 3 3 80 7 31653072 31654541 CTCACTGTCTACTACAGTCC 58 31653011 31653029 CAGGATGCAGATAGTCAGG 59 NA Mus musculus 50 Ccdc83 ENSMUSG00000030617 ENSMUST00000107221,ENSMUST00000107220,ENSMUST00000040413 3 3 3 84 7 97392595 97392613 GCTCAACTCATTGTTTCCT 57 97388830 97392549 GGGTGACTTTATACTGTTCTG 58 NA Mus musculus 50 Kif22 ENSMUSG00000030677 ENSMUST00000032915 1 1 2 80 7 134174602 134176153 CAGAAACTAAGCCTCTTACAG 58 134174542 134174560 CAGCAAACGTTCCATACTC 58 NA Mus musculus 50 Sult1a1 ENSMUSG00000030711 ENSMUST00000106373,ENSMUST00000106371,ENSMUST00000106372,ENSMUST00000075935 1 4 4 80 7 133817686 133817793 ATGGGAAAGTGTCCTATGG 58 133817624 133817643 GATAGAGAACAGGGTGAGTG 59 NA Mus musculus 50 Fgf13 ENSMUSG00000031137 ENSMUST00000088612 3 1 3 131 X 56385119 56419199 TCATATTCAGAGCCTCAGC 58 56379164 56385027 GTTAAACAGAGTGTAAGTGCTG 59 NA InUTR Mus musculus 50 Cstf2 ENSMUSG00000031256 ENSMUST00000113283 3 1 6 81 X 130607293 130607760 AATTGCAGTCTGTGATGCT 59 130607803 130608671 GTAAGCTCTAGGTTCTACGTC 59 NA Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112403,ENSMUST00000112401,ENSMUST00000078682,ENSMUST00000112398 3 4 10 178 X 156896795 156899282 CTACTCCAATGATGCTGCT 59 156906835 156906856 CATGTTGAAACACTATCTCACC 59 NA Mus musculus 50 Dmrtc1a ENSMUSG00000031323 ENSMUST00000033686 2 1 1 71 X 100100409 100100427 CACTGACCCTATGCTACTG 59 100100181 100100199 GTAGCAGAAACTGAAGCCT 59 NA DesignNoJunction Mus musculus 50 Morc4 ENSMUSG00000031434 ENSMUST00000087401,ENSMUST00000033811 3 2 4 96 X 136372513 136375246 CTACTTCCAGGCTGATTCC 59 136372435 136372453 GGTAATGTGGATGGATCCA 58 NA Mus musculus 50 Lamp1 ENSMUSG00000031447 ENSMUST00000110847,ENSMUST00000033824 2 2 2 80 8 13165896 13165914 GGCACAACGTGTATAATGG 58 13165958 13167166 GTTCACGATCTGAGAACCA 59 NA Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113685,ENSMUST00000050905,ENSMUST00000113684,ENSMUST00000030185 3 4 16 83 9 66877542 66878846 TGACTTAGAAGACGAGCTG 58 66877477 66877495 GTCATATCGTTGAGAGCGT 59 NA Mus musculus 50 Car12 ENSMUSG00000032373 ENSMUST00000085420 1 1 2 80 9 66601620 66611063 TCCGACAAGGTATCATCCT 59 66611107 66611125 AGAGCCAAATAGACACTGC 59 NA Mus musculus 50 Trip4 ENSMUSG00000032386 ENSMUST00000034952 1 1 2 89 9 65686841 65699188 CAATTTCAGGAGCAGTTCC 58 65686770 65686788 CTTCACAACCATTTCCTGG 58 NA Mus musculus 50 Atr ENSMUSG00000032409 ENSMUST00000034980,ENSMUST00000098471 3 2 2 109 9 95768007 95768027 CTCAAGAATTCTGTTGCTGAG 59 95768098 95770312 TTGACATTATGGCCATCCA 58 NA InUTR Mus musculus 50 Fhod3 ENSMUSG00000034295 ENSMUST00000037097,ENSMUST00000115820,ENSMUST00000091991,ENSMUST00000115819 1 4 4 80 18 25271097 25271116 GAACAATAAGACTCTGGGCT 59 25271158 25272021 AATGCTTTGGCATTAGTTCC 59 NA Mus musculus 50 Hdx ENSMUSG00000034551 ENSMUST00000113422,ENSMUST00000038472 1 2 2 80 X 108714273 108714294 TGAAGTAGGAGAGGATAATGAC 58 108706637 108714232 TCATTGGACTCCTCTTGAG 58 NA Mus musculus 50 Zcchc11 ENSMUSG00000034610 ENSMUST00000043368 2 1 3 84 4 108230067 108231326 TTCTATGCTCAAGCAGACAG 59 108231373 108231391 ATTACTCGGACACGTTTCC 59 NA Mus musculus 50 Pip5k1c ENSMUSG00000034902 ENSMUST00000045469,ENSMUST00000105327 2 2 3 81 10 80773616 80774392 GAGACAGATGACACGATGG 59 80774436 80774455 TATCAATGATCCCGATGTGG 59 NA Mus musculus 50 Kcnh4 ENSMUSG00000035355 ENSMUST00000107363,ENSMUST00000107361,ENSMUST00000092679 2 3 3 82 11 100603307 100605450 GCTGAACCAAGAGATCTCC 59 100603243 100603261 CCTGTAAGAGACCCATCAC 59 NA Mus musculus 50 Rnf38 ENSMUSG00000035696 ENSMUST00000045793,ENSMUST00000102934,ENSMUST00000098098,ENSMUST00000107836 2 4 4 84 4 44150479 44150497 CGTAGTAGATACCGATCCC 58 44147833 44150431 CTGGAAGCATTGATAGCAC 58 NA Mus musculus 50 Palm ENSMUSG00000035863 ENSMUST00000105379 3 1 2 92 10 79277972 79281790 CAATGATGAAAGCAGTGGTC 59 79281845 79281863 TGTGAATGAGTTCGTCCAC 59 NA Mus musculus 50 Entpd8 ENSMUSG00000036813 ENSMUST00000114378,ENSMUST00000114376 2 2 4 81 2 24939601 24940257 AGTTCTATGTGGAAGTCAGC 59 24940300 24940319 AATACGAGGATGTACAGACC 58 NA Mus musculus 50 Unc84a ENSMUSG00000036817 ENSMUST00000058716,ENSMUST00000078690 1 2 5 194 5 139707184 139709436 CTATACAGGTGACCTCTTGG 58 139709923 139709942 AGAAGAAAGACATTCAGCCA 59 NA Mus musculus 50 2510003E04Rik ENSMUSG00000036955 ENSMUST00000065887 1 1 2 81 10 62026032 62026050 GGAAATAGCAAGATGCTGG 58 62022617 62025987 CTCTCCTATGTTGTCCTGC 59 NA Mus musculus 50 4930583H14Rik ENSMUSG00000037161 ENSMUST00000038154,ENSMUST00000108046 3 2 2 97 3 51195816 51195834 GTCATCCAGGAAATTCCCT 58 51195232 51195758 CCTTGTAAGTGTAATATCCACC 58 NA Mus musculus 50 Rapgef6 ENSMUSG00000037533 ENSMUST00000101206,ENSMUST00000102743,ENSMUST00000050145,ENSMUST00000108894,ENSMUST00000094536 2 5 7 80 11 54462770 54462788 GAACACTTTCATCCAGCAG 58 54462830 54470756 CAGGAATATCTGAAGGATTGG 57 NA Mus musculus 50 AW146242 ENSMUSG00000037788 ENSMUST00000114297 2 1 1 60 6 57724757 57724776 TTCCTATGAAGACTGCTGTG 59 57724716 57724734 CAGCCTCTGTATGGAAAGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Acd ENSMUSG00000038000 ENSMUST00000042608,ENSMUST00000095190 3 2 3 153 8 108223791 108223917 AATGAGTGTCTTGAGGACC 58 108223526 108223544 TACAAGGACCTTTCAGCAC 59 NA Mus musculus 50 Cep250 ENSMUSG00000038241 ENSMUST00000109619 3 1 4 104 2 155793383 155794504 AGATCCTGACAAACCATGC 59 155794571 155794590 GGGTTATAGCCTTGATCACC 59 NA Mus musculus 50 Fbxo25 ENSMUSG00000038365 ENSMUST00000043520 2 1 2 82 8 13929432 13931192 GTGACAAAGCAGGTAAACAC 59 13931237 13931255 TCTGAGAAACGGTACAGGA 59 NA Mus musculus 50 Tbkbp1 ENSMUSG00000038517 ENSMUST00000092755,ENSMUST00000107615,ENSMUST00000107614,ENSMUST00000066078 1 4 5 97 11 96998978 96999943 CCATCAACCTACTGATGGAG 59 96998900 96998918 GATGAGAGCATCATCTGGG 59 NA Mus musculus 50 2310066E14Rik ENSMUSG00000038604 ENSMUST00000109346,ENSMUST00000043531 1 2 2 80 8 108144842 108144860 TGGAGTTATGTAGAAGCCT 57 108144903 108145027 CTGTACTAGTAACACCTCCT 57 NA Mus musculus 50 Trps1 ENSMUSG00000038679 ENSMUST00000077935,ENSMUST00000079553,ENSMUST00000090037,ENSMUST00000080683 2 4 4 60 15 50654219 50654237 ATAAATGTCGTCAGTGCAG 57 50654177 50654195 TTGAAGTGCTCCAATAGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Arid4b ENSMUSG00000039219 ENSMUST00000049601,ENSMUST00000110534,ENSMUST00000039538 2 3 5 80 13 14257202 14262196 CGATCTGGAGATGAAACCA 59 14262240 14262258 TTCTTCCTCGTCTTCTTCC 58 NA Mus musculus 50 Wdr45 ENSMUSG00000039382 ENSMUST00000115686,ENSMUST00000116633 1 2 8 80 X 7304144 7304164 CTTTGATACCCAATCCAAGGA 59 7304205 7304887 CTACACAGATGGCAGTACAG 59 NA Mus musculus 50 Cntnap2 ENSMUSG00000039419 ENSMUST00000069147 3 1 3 96 6 45942071 45951177 AAATCTAGGTTTCAACCAGC 58 45951236 45951254 AATGAGTACAGAGTGCCAG 58 NA Mus musculus 50 Zfp189 ENSMUSG00000039634 ENSMUST00000042964,ENSMUST00000107696 2 2 2 101 4 49535299 49535320 GAGAAGCCTGTATAAAGATGTC 58 49541916 49541934 TCTTCTTTCACAGTTGGCT 59 NA DesignNoJunction Mus musculus 50 Icmt ENSMUSG00000039662 ENSMUST00000048892,ENSMUST00000087301 3 2 2 63 4 151672798 151672816 CCATCAGAGCTTGTTTCCT 59 151672843 151672861 GACTGGCTGAAACTTAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxl5 ENSMUSG00000039753 ENSMUST00000114047,ENSMUST00000047857,ENSMUST00000087465 1 3 3 80 5 44164728 44164748 GTACACTCTGACAATAAGCTC 58 44162057 44164688 CTGTTCGTACTCATTCTTGAC 58 NA Mus musculus 50 A730011L01Rik ENSMUSG00000039850 ENSMUST00000106245,ENSMUST00000106244,ENSMUST00000064513 3 3 3 201 11 119362008 119363615 CAAGGAGAAGATTGTGCTC 58 119364117 119364135 TATAGGTTCTGGGATCCGG 59 NA DesignRelaxed Mus musculus 50 Disp2 ENSMUSG00000040035 ENSMUST00000063975,ENSMUST00000110846,ENSMUST00000110843,ENSMUST00000037547 3 4 4 81 2 118612455 118612614 ATGCCGAAGAGCTATTCTC 59 118612659 118612677 TACAGAGGAAGATGAAGGC 58 NA Mus musculus 50 Rbms2 ENSMUSG00000040043 ENSMUST00000099139,ENSMUST00000092033,ENSMUST00000105247,ENSMUST00000076233 2 4 4 192 10 127580603 127582741 ACAAATGGCAAAGCAACAG 59 127575232 127575250 ACACTTCTCTGTTGACTCC 58 NA Mus musculus 50 Rbms2 ENSMUSG00000040043 ENSMUST00000099139,ENSMUST00000092033,ENSMUST00000105247,ENSMUST00000076233 3 4 4 194 10 127580603 127582741 ACAAATGGCAAAGCAACAG 59 127575230 127575249 TCACACTTCTCTGTTGACTC 59 NA Mus musculus 50 Fmo2 ENSMUSG00000040170 ENSMUST00000045902,ENSMUST00000111510 2 2 2 81 1 164817853 164818836 TCAGTTTCAGACCACTGTC 59 164817790 164817810 GCTCTGAGTATAAACTTCCCA 59 NA Mus musculus 50 Tlr8 ENSMUSG00000040522 ENSMUST00000112170,ENSMUST00000112169 3 2 3 112 X 163701745 163701763 TAGAGCACATCTTCTTCCA 57 163683752 163683770 CAGAATCCATGACTGAGGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Ranbp17 ENSMUSG00000040594 ENSMUST00000102815,ENSMUST00000037522 2 2 2 80 11 33400765 33404694 AGAACAAGGAACAACATCC 57 33400703 33400721 GGTAAAGGATTGATTCGGG 57 NA Mus musculus 50 Tmem146 ENSMUSG00000040828 ENSMUST00000112979 2 1 2 81 17 56793108 56793126 GACTTCGACAAGTGTACAG 57 56793170 56793867 GAAGTTCCACATTACATGGT 57 NA Mus musculus 50 Rshl1 ENSMUSG00000040866 ENSMUST00000035521,ENSMUST00000076887 2 2 2 96 7 19653492 19659396 CACTGGCAAGAAGTTTGAG 58 19659456 19659474 CTCTTGCTGAATCAGAGCT 59 NA Mus musculus 50 Foxa3 ENSMUSG00000040891 ENSMUST00000036018 3 1 1 60 7 19600456 19600475 ATTCTCCAGTGAATCCTGTG 59 19600415 19600433 GGGTTCAAGGTCATGTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ulk4 ENSMUSG00000040936 ENSMUST00000098284,ENSMUST00000051479,ENSMUST00000098283 3 3 4 95 9 121175727 121182004 AAATAACCAACTGGGTCCG 59 121175650 121175668 CCAACCAGAGATGATTGCT 59 NA Mus musculus 50 Arhgef10l ENSMUSG00000040964 ENSMUST00000069623,ENSMUST00000105800,ENSMUST00000105799,ENSMUST00000105798 1 4 7 156 4 140124681 140126185 AACATCAACTTCAAGCCCT 59 140124308 140124327 GATTGTCTTTGTCGTAGGTG 58 NA Mus musculus 50 Nkx6-2 ENSMUSG00000041309 ENSMUST00000097974,ENSMUST00000039606,ENSMUST00000106095 2 3 3 209 7 146767836 146767854 CAGACCAAGTATTTGGCAG 58 146767453 146767471 GTATTCGTCATCGTCCTCC 59 NA DesignNoJunction Mus musculus 50 Dcp1b ENSMUSG00000041477 ENSMUST00000073909 1 1 2 144 6 119165611 119167924 CTCCTCTTCTGCAGAACTG 59 119170055 119170073 GTCACGCTGAAGAGATAGG 59 NA Mus musculus 50 Dmtf1 ENSMUSG00000042508 ENSMUST00000040604 1 1 5 91 5 9132485 9132503 TTATAGAAGAGTGCTGCGC 59 9130642 9131283 TCCACAGTTGTTCCTTGAG 59 NA Mus musculus 50 Emx2 ENSMUSG00000043969 ENSMUST00000062216 1 1 1 60 19 59536310 59536328 CACAGTCTCAGTCTTACGG 59 59538385 59538403 ATTTCGTTCTCCGGTTCTG 59 NA DesignNoJunction Mus musculus 50 Tnip3 ENSMUSG00000044162 ENSMUST00000053641 2 1 2 125 6 65549910 65549929 CATGTGAAATTAAACGCCTC 57 65555916 65555936 TTCCACCTCTTCTCATCTC 57 NA Mus musculus 50 Sh2d5 ENSMUSG00000045349 ENSMUST00000105822 3 1 5 84 4 137810200 137810218 TTTCCTGTGGATGACTTGG 59 137810265 137812643 GATACAGGATATGGACCTGC 59 NA Mus musculus 50 BC056923 ENSMUSG00000047443 ENSMUST00000086861,ENSMUST00000116555 2 2 2 92 1 93268028 93268963 CTATCTACAGGCAGGACAC 58 93269019 93269037 ATAGCACTGAAGTGAGAGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Bola2 ENSMUSG00000047721 ENSMUST00000052145 2 1 2 293 7 133839544 133839562 TGTGGTTATGGAACTCAGC 59 133840176 133840194 TTAATGACTGTTCAGGCCT 58 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Mus musculus 50 Entpd1 ENSMUSG00000048120 ENSMUST00000112231,ENSMUST00000052414 3 2 2 81 19 40797658 40797676 TGATACCAACATCCAAGCA 58 40797721 40799426 TCGCTTTCCATTCTAAGCA 59 NA Mus musculus 50 Selplg ENSMUSG00000048163 ENSMUST00000063167,ENSMUST00000100874,ENSMUST00000072194 3 3 3 60 5 114269405 114269423 CCACAGAGTCTAACGAGTC 59 114269363 114269382 CTGTCAGGTAAGTGAGTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Asb8 ENSMUSG00000048175 ENSMUST00000059112 2 1 1 153 15 97973084 97973102 GTAGAGGACCTCATCAGAG 57 97966842 97966860 TTCGGTTGTAACCATCCAG 59 NA DesignNoJunction Mus musculus 50 4931432M23Rik ENSMUSG00000048400 ENSMUST00000052690 3 1 1 125 8 98089448 98089466 CATGCATTTCAACGACCTG 59 98088362 98089360 GTCATGTGATTTCCTGTTGC 59 NA Mus musculus 50 Bdnf ENSMUSG00000048482 ENSMUST00000053317,ENSMUST00000111051,ENSMUST00000111049,ENSMUST00000111047,ENSMUST00000111046,ENSMUST00000111050,ENSMUST00000111052,ENSMUST00000111045,ENSMUST00000111044,ENSMUST00000111043,ENSMUST00000111042 3 11 11 60 2 109564058 109564076 ACAGTCCTAGAGAAAGTCC 57 109564099 109564118 TGGTCTCGTAGAAATACTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700067C01Rik ENSMUSG00000049123 ENSMUST00000048659 1 1 2 135 7 30510266 30510284 CATGAGCCCATCGATACAG 59 30509253 30510060 CACATGTATAGACCTGTCCC 59 NA Mus musculus 50 6030446N20Rik ENSMUSG00000049411 ENSMUST00000055447,ENSMUST00000092075 3 2 3 108 18 12276913 12276934 CCTACCCTACATTATTCCAAGG 59 12262681 12271913 ACATCAGATCTTGGACTGC 59 NA Mus musculus 50 Adamts16 ENSMUSG00000049538 ENSMUST00000080145,ENSMUST00000109694 1 2 2 80 13 70910914 70910932 AGTGTGCCGAGTATAACAG 59 70909153 70910870 AGTCCTGATCTTCCAACTG 58 NA Mus musculus 50 Zfp668 ENSMUSG00000049728 ENSMUST00000106263,ENSMUST00000106262,ENSMUST00000106261,ENSMUST00000054415 1 4 4 188 7 135011282 135011300 CTGAGCTCAAGGACTTACG 59 135010720 135010738 TTTGGTAAGAGCTGAGCTG 59 NA DesignNoJunction Mus musculus 50 Txndc14 ENSMUSG00000050043 ENSMUST00000111665,ENSMUST00000053664 3 2 2 83 2 84513755 84515571 AACCATTGATGAGGAGCTG 59 84513690 84513710 GATTGGCAATCATTAGACCAG 59 NA Nonspecific Mus musculus 50 Plcb1 ENSMUSG00000051177 ENSMUST00000110116,ENSMUST00000070724 2 2 3 87 2 134639337 134639357 GACTCCACTATTGTTACTCCA 58 134639406 134813869 GCTCCGTCTCCTTATTCTG 59 NA Mus musculus 50 ENSMUSG00000052469 ENSMUSG00000052469 ENSMUST00000080075,ENSMUST00000097403 2 2 2 61 17 13549373 13549391 CCAAAGCCTGTATAGGCTC 59 13549416 13552623 TATGTACACTGGCAGAGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Kcnip1 ENSMUSG00000053519 ENSMUST00000101368,ENSMUST00000109340,ENSMUST00000065970,ENSMUST00000109341,ENSMUST00000093194 3 5 5 93 11 33534580 33534598 ATGTGGATGTCTTCTTCCA 58 33530588 33533155 ATGTTGTCATCCTCCTGAC 58 NA Mus musculus 50 Dpep2 ENSMUSG00000053687 ENSMUST00000081998 3 1 2 84 8 108511988 108512007 TAGCCAATGTATCCACTGTG 59 108510129 108510352 ATGACTGACACGAAGTGTG 59 NA Mus musculus 50 Fpgt ENSMUSG00000053870 ENSMUST00000066568 1 1 1 63 3 154753076 154753094 GTCCTGCTAATCCACTCTG 59 154750989 154751007 TCTTTCCTAAAGCACTCGC 59 NA DesignNoJunction Mus musculus 50 Nlrp9a ENSMUSG00000054102 ENSMUST00000108387,ENSMUST00000071780 1 2 3 102 7 27355689 27356270 TGTCTTGGGTTAGACATGTG 59 27356334 27356353 TCCAGTCAAGGTTTAAGCTC 59 NA Mus musculus 50 Lrtm2 ENSMUSG00000055003 ENSMUST00000068351,ENSMUST00000112756 2 2 2 125 6 119270457 119270475 GAATTCAAACACTGGCTGG 59 119267440 119267460 GTAGTTAAACATCTCCATGGG 58 NA DesignNoJunction Mus musculus 50 Dach1 ENSMUSG00000055639 ENSMUST00000069334,ENSMUST00000110812 1 2 3 100 14 98315182 98369038 AATTCAAGTGTTGGACTGGA 59 98315101 98315119 ATCTGACTCATTGCCATGG 59 NA InUTR Mus musculus 50 Centa1 ENSMUSG00000056413 ENSMUST00000110865 3 1 3 118 5 139783780 139783798 TGTGTTCATCTGTTTGAGC 58 139778334 139783698 CATGAGATGCCATGAACTC 58 NA Mus musculus 50 Cngb3 ENSMUSG00000056494 ENSMUST00000070627,ENSMUST00000102999 3 2 2 80 4 19210718 19236685 CAGCAAAGAAGACAACAGC 59 19236729 19236747 AGTTCTGCTCGACATTCAG 59 NA Mus musculus 50 Pign ENSMUSG00000056536 ENSMUST00000070699,ENSMUST00000073314 2 2 4 93 1 107418698 107443254 GATATTGGAACAAGCATCAGC 59 107418625 107418643 TTGTTGTGAGCAATTGTGC 59 NA Mus musculus 50 Pcbp2 ENSMUSG00000056851 ENSMUST00000077037,ENSMUST00000078404 3 2 3 129 15 102314645 102314663 TCTCCAGTCATCTTTGCAG 59 102316463 102317528 TGGTATAGGCCTCTAGAGG 58 NA Mus musculus 50 Acbd4 ENSMUSG00000056938 ENSMUST00000107040,ENSMUST00000074474 1 2 6 80 11 102964949 102965415 CCTAAGAATGGGATGCCTG 59 102965459 102965477 CACCAGCTTCATCTCAGAG 59 NA Mus musculus 50 Dtnbp1 ENSMUSG00000057531 ENSMUST00000072329 3 1 2 100 13 45026511 45048549 CCTTCAAAGCTGAACTCGA 59 45026429 45026447 TTCCTCGAAGAACTTCTGC 59 NA Mus musculus 50 Lmcd1 ENSMUSG00000057604 ENSMUST00000089151 1 1 2 148 6 112265736 112265754 TCGTCAAGCACTACAAGAG 59 112265874 112265896 TTCTTTGGATGGATCAGGC 59 NA Mus musculus 50 Sema3b ENSMUSG00000057969 ENSMUST00000102532,ENSMUST00000073448,ENSMUST00000102529,ENSMUST00000102531,ENSMUST00000102530 1 5 5 80 9 107505253 107505271 ATCTTTCGAAGCCTTGGTC 59 107504423 107505211 GACAAACTTGGGTTCATTGAG 59 NA Mus musculus 50 Adra2b ENSMUSG00000058620 ENSMUST00000104934,ENSMUST00000071902 1 2 2 60 2 127189368 127189386 CCATCACCTTTCTCATCCT 58 127189410 127189428 AACACAGCCAGAATTACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lin9 ENSMUSG00000058729 ENSMUST00000085803,ENSMUST00000085804 3 2 2 83 1 182582089 182589204 ATCCCACAGAAATTTACAGC 58 182589250 182589268 GAGTAGGTTCCGTAATCGA 58 NA Mus musculus 50 Col13a1 ENSMUSG00000058806 ENSMUST00000051826 2 1 4 83 10 61440502 61440521 TAACTCAATCCCTGCAACTG 59 61424084 61424102 CTACGCGAGTAGAACTTCC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Pde1a ENSMUSG00000059173 ENSMUST00000102654,ENSMUST00000102655,ENSMUST00000102653 3 3 7 92 2 79767894 79767913 GTGATGTCAACGTTGTTGAC 59 79746319 79767839 CCAGCAGTCTTCTTGTCTC 59 NA Mus musculus 50 Serpinb12 ENSMUSG00000059956 ENSMUST00000078313 3 1 3 121 1 108845723 108845744 CTAGGATGAACACAAAGAACC 58 108845827 108846151 TTGTAGATTCACCCTGCTG 59 NA Mus musculus 50 4921513D23Rik ENSMUSG00000060657 ENSMUST00000078747 3 1 2 83 16 14149165 14149186 AGAGAAGCAGAGTTTATCTGTG 59 14146175 14149124 GACATCAGCTGAATTATTCAGC 59 NA Mus musculus 50 Pclo ENSMUSG00000061601 ENSMUST00000030691,ENSMUST00000115309 1 2 3 80 5 14723314 14750486 CACAGTTTCAGGTAATGGG 58 14750530 14750548 TAGGCTCCAATTTCTCCAC 58 NA Mus musculus 50 Dlgap4 ENSMUSG00000061689 ENSMUST00000000094,ENSMUST00000070782,ENSMUST00000109568,ENSMUST00000109567 3 4 6 86 2 156536990 156571581 GCTTCCAAGTTCATCATGC 59 156571631 156571649 ACTGAGATGAACGGTTTCG 59 NA Mus musculus 50 Tnnt3 ENSMUSG00000061723 ENSMUST00000105956,ENSMUST00000105943,ENSMUST00000105942 2 3 20 179 7 149689963 149694250 AGAGGAAGAGGAGAAACCA 59 149697249 149697268 TTAAGTGCGATTAGCTCCTC 59 NA Mus musculus 50 Kalrn ENSMUSG00000061751 ENSMUST00000114961 1 1 13 200 16 34049998 34053653 ATGAGATGTCGTCTTTGCT 58 34049816 34049834 AATTAGGATGTGGGAGACC 58 NA Mus musculus 50 Tac1 ENSMUSG00000061762 ENSMUST00000090679 3 1 2 122 6 7507253 7507730 TCTTTATGGACATGGCCAG 59 7512401 7512419 CTTTCGTAGTTCTGCATCG 58 NA Mus musculus 50 Arf2 ENSMUSG00000062421 ENSMUST00000107008 1 1 3 161 11 103841054 103843008 CTCATGGAGCTCTTGAAGG 59 103843130 103844920 TCATAGCATTAGGAAGATCCTG 59 NA Mus musculus 50 Lin28b ENSMUSG00000063804 ENSMUST00000079390,ENSMUST00000099849 1 2 4 82 10 45139007 45140340 AAGGGAGATAGGTGGAGAC 59 45138943 45138962 CTTGGAATCATCCTGGACTC 59 NA Mus musculus 50 2310035K24Rik ENSMUSG00000068264 ENSMUST00000110210,ENSMUST00000110208,ENSMUST00000089506,ENSMUST00000110206 3 4 4 163 2 131037130 131037148 AAATCACCCGATGATCCAC 59 131038248 131038266 GGTTCAGCTGAGAACTGAG 59 NA DesignNoJunction Mus musculus 50 Ank3 ENSMUSG00000069601 ENSMUST00000092434,ENSMUST00000092431,ENSMUST00000054167,ENSMUST00000047061,ENSMUST00000092432,ENSMUST00000092433 3 6 7 80 10 69421750 69421768 GACCTGGAAGGAACATCAG 59 69421812 69436479 CTGTCGAGTTCTTCATCCA 59 NA Mus musculus 50 OTTMUSG00000011097 ENSMUSG00000070605 ENSMUST00000105733,ENSMUST00000105734,ENSMUST00000078693 2 3 3 61 4 145733630 145734489 AAATACACCACAGGGTCTG 59 145733587 145733605 ATTCCTCCAGTGAGAAGTC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 A230069A22Rik ENSMUSG00000073680 ENSMUST00000097742 3 1 1 67 4 155159673 155159691 GACAGAAGAGGATGAAGGC 59 155159624 155159642 AATCAGTAGGCCTTCTTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 6330545A04Rik ENSMUSG00000073733 ENSMUST00000105793,ENSMUST00000097813 2 2 2 83 4 140774522 140774540 CTTCCTGGACAGTTGACTC 59 140774584 140775767 CATGTACTGATCAAACTTGGAC 59 NA Mus musculus 50 NM_001033768.2 ENSMUSG00000074997 ENSMUST00000099659 2 1 1 60 2 104556403 104556423 AGAACCCTGCTTAATACACTG 59 104556363 104556382 CTGGTTTCTTAGTGTTGCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Prdm11 ENSMUSG00000075028 ENSMUST00000111272,ENSMUST00000111273 1 2 4 120 2 92826932 92829396 TACCAGCTATGATGAAGACG 58 92826831 92826849 AGATGAATAGAGCAGCGTG 59 NA Mus musculus 50 Ifna5 ENSMUSG00000078641 ENSMUST00000107138,ENSMUST00000071378 1 2 2 60 4 88473398 88473417 CCTCAGACTCATAACCTCAG 58 88473440 88473458 GTCTCCTCATTTGTACCAG 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 A8Y5P7_MOUSE ENSMUSG00000078716 ENSMUST00000107865,ENSMUST00000107864,ENSMUST00000107866 2 3 3 154 4 43698922 43698940 TCACCTATGGATTCCAGCT 59 43699058 43702313 ACAGGCATGATAGAACGTG 59 NA Mus musculus 50 A2AJJ1_MOUSE ENSMUSG00000078719 ENSMUST00000107884 1 1 1 62 4 43596709 43596727 ATTGTACCTGTCTGCATCC 59 43596346 43596364 AGTCAATAGGATGCTGAGC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Sec61g ENSMUSG00000078974 ENSMUST00000109643,ENSMUST00000109642,ENSMUST00000109641 2 3 3 71 11 16401800 16404746 ATTATTGTGGGTGGCTGAG 59 16401747 16401765 TTACTTCATGCCCTTTCCC 59 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 9030025P20Rik ENSMUSG00000079709 ENSMUST00000087433 1 1 2 92 17 15119271 15119289 TACTGGTTGGGAAAGAGTG 58 15119342 15119862 CTAGAATATTCACAGCATGTCC 58 NA Nonspecific Mus musculus 50 mmu-mir-125b-2 ENSMUSG00000065472 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Rpl41 ENSMUSG00000066809 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-466b-1 ENSMUSG00000076955 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Rrp15 ENSMUSG00000001305 ENSMUST00000001339 2 1 1 192 1 188563647 188563665 GAGGAAGACAATGAAGACG 57 188561555 188563491 TCTTATCAAGCTGCTTCCT 58 NA Mus musculus 50 Marveld3 ENSMUSG00000001672 ENSMUST00000051430 1 1 2 66 8 112483621 112483639 AATGCAGATACTTGTGCAC 58 112478602 112478620 ATCAGCAAGTTCAGCAGAG 59 NA DesignNoJunction Mus musculus 50 Srpk3 ENSMUSG00000002007 ENSMUST00000002081 3 1 1 81 X 71023672 71023847 CTTCAACCGTAGAGGAGAG 58 71023891 71023910 CTCATACTTCTCCATGAGCA 58 NA Mus musculus 50 Bicd1 ENSMUSG00000003452 ENSMUST00000086829,ENSMUST00000111517,ENSMUST00000111513,ENSMUST00000003544 1 4 4 80 6 149432708 149443090 AACTGAAAGAGAACAACGAG 58 149443131 149443151 CCTCCCGGAATTTATATTCTC 57 NA Mus musculus 50 Farsa ENSMUSG00000003808 ENSMUST00000003906,ENSMUST00000109754,ENSMUST00000095222 2 3 3 123 8 87385216 87385236 CAGTATAGAGGATGAAGTGCA 59 87385321 87387966 TTTCAGGATCACTTCCGTC 59 NA Mus musculus 50 Apba3 ENSMUSG00000004931 ENSMUST00000057798,ENSMUST00000099453 3 2 2 80 10 80735688 80735797 TCACAGAGACAAGAGAAATCC 59 80735839 80735857 ATACTGGTTGTTCCTGTCC 58 NA Mus musculus 50 Tmem110 ENSMUSG00000006526 ENSMUST00000006701 1 1 1 80 14 31677639 31677658 CATAGGGATGCTCTTCATCC 59 31677700 31679817 ATGAGGTACAGTGAACAAGG 59 NA Mus musculus 50 Casq1 ENSMUSG00000007122 ENSMUST00000003554 2 1 1 84 1 174146979 174146998 TGTTCAAAGGAGATGAAGTC 57 174146141 174146932 TCTTCTAGGACATCAAGCA 57 NA Mus musculus 50 Arpp19 ENSMUSG00000007656 ENSMUST00000007800 1 1 1 124 9 74900096 74900114 AAGGTATCCTCACTTGGGA 59 74904480 74904499 GCTTGTTCTTCATCTTTGCT 59 NA DesignNoJunction Mus musculus 50 Otog ENSMUSG00000009487 ENSMUST00000009631 1 1 1 80 7 53526680 53526699 GACACTATCGCACATTTGAC 59 53526742 53529088 GCTCGGATGTACTCTTGAC 59 NA Mus musculus 50 Nxf2 ENSMUSG00000009941 ENSMUST00000113189,ENSMUST00000113187,ENSMUST00000010085 2 3 3 80 X 131486079 131486098 TTCTCGATGCTTACCATGAC 59 131485917 131486036 CCAAGTTGTTCAGGTTTGG 59 NA Mus musculus 50 Mcoln2 ENSMUSG00000011008 ENSMUST00000011152,ENSMUST00000098524 1 2 2 80 3 145838653 145838671 AAGGAATTGACCTACAGGC 59 145838715 145839490 TGTTGTCGAAGGTAATCGT 58 NA Mus musculus 50 Prdm15 ENSMUSG00000014039 ENSMUST00000095849,ENSMUST00000113740 1 2 2 80 16 98016260 98017271 CAGAGTATCCAACAGGTGG 59 98016198 98016217 GATGTTGGTTAGACCAACTG 58 NA Mus musculus 50 Anapc1 ENSMUSG00000014355 ENSMUST00000014499,ENSMUST00000110333 3 2 3 80 2 128510391 128511569 GAAACAGAAGGAAAGCTGG 58 128510329 128510347 ACATAGAGCTCTTCATCGT 57 NA Mus musculus 50 A230106N23Rik ENSMUSG00000015484 ENSMUST00000015628 3 1 1 65 1 157927118 157927137 TAGCTACAGTGATCCTCCTC 59 157926431 157927090 AGCAGTAATACTGGAGCCT 59 NA DesignRelaxed Mus musculus 50 Ctsz ENSMUSG00000016256 ENSMUST00000016400 3 1 1 124 2 174263755 174263773 ACTGGAGAAATGTGAACGG 59 174259152 174263668 CTTGATGTTGATTCGGTCTG 58 NA Mus musculus 50 Mpped2 ENSMUSG00000016386 ENSMUST00000111063,ENSMUST00000111065,ENSMUST00000016530 2 3 3 98 2 106539683 106584865 ATGTACATATGGTCGACCC 58 106584927 106584945 TACCATCTGTTCTGGAGTG 58 NA Mus musculus 50 Matn4 ENSMUSG00000016995 ENSMUST00000103104,ENSMUST00000103103,ENSMUST00000059332,ENSMUST00000109360 2 4 8 85 2 164223016 164225243 AGAATTGTTTGGCCTTGGA 59 164222949 164222967 ACAGAAATACGAGTCCACG 59 NA Mus musculus 50 Wsb1 ENSMUSG00000017677 ENSMUST00000017821 3 1 1 88 11 79058055 79059679 AGATGATGGAAACATGGTG 57 79057985 79058003 AACACAGCATAGAACAGTC 57 NA Mus musculus 50 Myo1c ENSMUSG00000017774 ENSMUST00000102505,ENSMUST00000069057,ENSMUST00000102504,ENSMUST00000108431,ENSMUST00000057572,ENSMUST00000108427 1 6 6 80 11 75471080 75471098 GGAGAATTTCACCAGTGAG 57 75471140 75471265 CCGATGTAGGTATAAATGAGG 57 NA Mus musculus 50 Tbx5 ENSMUSG00000018263 ENSMUST00000018407 3 1 1 83 5 120295114 120303544 CCAGAATCACAAGATCACAC 58 120303590 120303608 TGTAACTCCAGGTCATCAC 58 NA Mus musculus 50 Mtmr4 ENSMUSG00000018401 ENSMUST00000103179,ENSMUST00000092802,ENSMUST00000018545 3 3 3 80 11 87425802 87426928 ACTATGAGGATGACTTTACGTG 59 87426968 87426987 AGTCTTCACTGTGATCAGAG 58 NA Mus musculus 50 Arrb1 ENSMUSG00000018909 ENSMUST00000098266,ENSMUST00000032995 2 2 2 80 7 106739844 106739862 AGACTACCAGACAGTTCCT 59 106739905 106741029 CTCCGTGGTAATAGATCTCC 58 NA Mus musculus 50 Lyst ENSMUSG00000019726 ENSMUST00000110559,ENSMUST00000050664 1 2 2 80 13 13770464 13770482 GACTGGGAGAACTTTACCT 58 13770526 13771242 GTCTTCAATGACACTGTGG 58 NA Mus musculus 50 Fabp7 ENSMUSG00000019874 ENSMUST00000020024 1 1 1 81 10 57505415 57505436 GAACACAGAGATCAATTTCCAG 59 57505478 57506082 CCGAACCACAGACTTACAG 59 NA Mus musculus 50 Dcbld1 ENSMUSG00000019891 ENSMUST00000069004,ENSMUST00000105476 3 2 2 84 10 52036882 52036900 ACGGAATTTACCATCAGCT 58 52036946 52039290 GCTGATAATCTGCCATATCAC 58 NA Mus musculus 50 Tmpo ENSMUSG00000019961 ENSMUST00000072239,ENSMUST00000092219,ENSMUST00000099355,ENSMUST00000105293,ENSMUST00000099357 2 5 6 109 10 90621587 90626802 GCGACAATGATGAAGACTC 58 90621496 90621514 ATTGTGCTCAGTCCTTCTC 59 NA Mus musculus 50 Myb ENSMUSG00000019982 ENSMUST00000020156,ENSMUST00000020158 2 2 2 80 10 20862811 20862830 CATTGGTCACAAACTGACAC 59 20861875 20862771 ATAGCTGGAGTTCTAAAGATGG 59 NA Mus musculus 50 Fabp6 ENSMUSG00000020405 ENSMUST00000020672 2 1 1 105 11 43411050 43412083 AAGAAGTTCAAGGCTACCG 59 43409664 43410981 AGATCTCCACCAACTTGTC 58 NA Mus musculus 50 Trim11 ENSMUSG00000020455 ENSMUST00000108810 1 1 3 182 11 58801175 58802238 TAGCCAAGGACATTAAGGAC 59 58803721 58803739 CAGATAAGACCAGCTCAGG 59 NA Mus musculus 50 Agr2 ENSMUSG00000020581 ENSMUST00000020898 1 1 1 80 12 36725224 36728281 GTGTTTGTAGACCCATCCC 59 36728323 36728343 AGAAGGTTCATAAGCGTAGAG 59 NA Mus musculus 50 Pxdn ENSMUSG00000020674 ENSMUST00000021008 3 1 1 80 12 30669842 30671940 CGAAACAATAACGAGTTGAG 57 30671983 30672001 TGTGTTCTGAATCATCAGC 57 NA Mus musculus 50 Nup85 ENSMUSG00000020739 ENSMUST00000021085,ENSMUST00000106510,ENSMUST00000106511 3 3 3 98 11 115443091 115443109 GTTCGTAATAACCGCTTGG 58 115443171 115443268 GTAATCCCGGAGGAATCTG 59 NA Mus musculus 50 Pik3r5 ENSMUSG00000020901 ENSMUST00000021283 1 1 1 80 11 68306439 68306581 CTATAGCAAGCTCAGGAGG 58 68306624 68306643 ACAGGCACATAGAAGAACTG 59 NA Mus musculus 50 1810035L17Rik ENSMUSG00000021040 ENSMUST00000077462 1 1 1 66 12 88788570 88790258 TTTGACAAAGAGACTGGCT 59 88790288 88790306 GAAGTTCTTCCTGAGAGGA 57 NA DesignNoJunction Mus musculus 50 Cdca7l ENSMUSG00000021175 ENSMUST00000021592 1 1 1 118 12 119115406 119115425 ATCTGCAATTGCAGTTACTG 58 119115506 119115948 TTCTGTAAGCTCTCCAGGT 59 NA Mus musculus 50 Rpp40 ENSMUSG00000021418 ENSMUST00000021855 3 1 1 101 13 35993246 35993267 ACCTGGATTCTAAGAAGTACAG 58 35990874 35993185 CTTCTGTACCTGTAGGATGC 59 NA Mus musculus 50 Shc3 ENSMUSG00000021448 ENSMUST00000021898 1 1 1 81 13 51568216 51575476 TCCAAACAGATCATAGCGA 58 51561916 51561934 CAACATAGTCCGTTGTGTC 58 NA Mus musculus 50 Sema4d ENSMUSG00000021451 ENSMUST00000021900,ENSMUST00000110040,ENSMUST00000110039 2 3 3 80 13 51819049 51820602 GAACATGGAGAGGTAGGTC 58 51818987 51819005 TTTGTCCTCACTCATCAGC 59 NA Mus musculus 50 Auh ENSMUSG00000021460 ENSMUST00000021913 1 1 2 81 13 52934929 52934947 GCAATTAACCAAGGGATGG 58 52930908 52933460 TTGTTGAGATGGTCTGAGC 59 NA Mus musculus 50 Trpc7 ENSMUSG00000021541 ENSMUST00000022023,ENSMUST00000109871 1 2 2 80 13 56905919 56905938 ATGATCGGAATGTTCAACCT 59 56891143 56905877 AAAGCTTTCTTCAACTGTGG 58 NA Mus musculus 50 Cast ENSMUSG00000021585 ENSMUST00000072276,ENSMUST00000109613,ENSMUST00000109612,ENSMUST00000065629,ENSMUST00000109610 2 5 5 92 13 74840066 74840084 AGAGCATAGCGAGAAACTG 59 74838686 74840010 TTCTCTGGTTTGTCCTTCC 59 NA Mus musculus 50 Arsk ENSMUSG00000021592 ENSMUST00000022083 3 1 1 80 13 76202944 76204092 ACTATGCTTGACATTGCTG 58 76202882 76202900 AGATGCATTTGACAACAGC 59 NA Mus musculus 50 F2rl1 ENSMUSG00000021678 ENSMUST00000022185 1 1 1 60 13 96283689 96283708 TCACCATCCCTTTGTATGTC 59 96283648 96283666 GTGGTGATGTTCAATGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pde8b ENSMUSG00000021684 ENSMUST00000022192,ENSMUST00000067082,ENSMUST00000067093 2 3 3 91 13 95870891 95874615 TCACAAGCATCTGATGACC 59 95865654 95865672 ATTATGCTGCTGTTCTCCA 58 NA Mus musculus 50 Nln ENSMUSG00000021710 ENSMUST00000022223,ENSMUST00000109315,ENSMUST00000063812 2 3 3 88 13 104815155 104825679 TATGAATCCAGAGGTTGGA 57 104815085 104815103 AGAAATTCTGGAGCATGTC 57 NA Mus musculus 50 Txndc16 ENSMUSG00000021830 ENSMUST00000022377,ENSMUST00000111851,ENSMUST00000095958 3 3 3 81 14 45792271 45802730 GGAACACCAGAGCATAGAG 59 45792208 45792227 CAATTTCTGTGGTTAAGGCA 58 NA Mus musculus 50 Dph3 ENSMUSG00000021905 ENSMUST00000022461 1 1 3 170 14 32898157 32898603 TCACCAAGGAAGATTTGGA 58 32894446 32896363 TAGCTTCATTCTGAGAGCC 58 NA InUTR Mus musculus 50 NP_001074599.1 ENSMUSG00000021913 ENSMUST00000022480 1 1 1 80 14 33156504 33157517 TATGGAGTTCTAGGCTTTGAG 58 33157559 33157577 ATCACCAAACTGAGCTTCC 59 NA Mus musculus 50 Sap18 ENSMUSG00000021963 ENSMUST00000022533 2 1 1 65 14 58417422 58420336 AGATCTACACCTGGATGGA 58 58420365 58420383 CTGGGTAGACTTCCTTCAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 1700019P01Rik ENSMUSG00000022388 ENSMUST00000109371,ENSMUST00000023023 3 2 2 80 15 88763208 88763875 ATTCTTGGATGACTTCCGG 59 88763146 88763165 ACTTTGCTGCAGTAATTCTG 58 NA Mus musculus 50 Nudt16l1 ENSMUSG00000022516 ENSMUST00000050881,ENSMUST00000115846 2 2 2 116 16 4939572 4939590 GCTGACATTGGAACAACTG 59 4940227 4940245 CCTACTCGATCCTTCTGTG 58 NA DesignNoJunction Mus musculus 50 Gcet2 ENSMUSG00000022659 ENSMUST00000089499,ENSMUST00000023339 3 2 2 81 16 45617009 45617027 CATACGCACATTTAAAGCC 57 45618953 45619948 ATTAGCATTGTCCTGAACG 57 NA Mus musculus 50 Snai2 ENSMUSG00000022676 ENSMUST00000023356 3 1 1 77 16 14707336 14708209 CATTAGAACTCACACTGGG 57 14708250 14708268 CTCAGGTTTGATCTGTCTG 57 NA DesignNoJunction Mus musculus 50 Sdf2l1 ENSMUSG00000022769 ENSMUST00000023453 1 1 1 164 16 17130878 17131704 CTATCCAACAACCAGGAGG 59 17130732 17130750 ATACTGTTCACCAGTGACC 58 NA Mus musculus 50 Mcfd2 ENSMUSG00000024150 ENSMUST00000024963 3 1 1 87 17 87656501 87656519 CTCTCCATAGCCATCACTC 58 87655343 87655361 CTATGATGCTGACGAGCTC 59 NA DesignNoJunction Mus musculus 50 Slc27a6 ENSMUSG00000024600 ENSMUST00000025500 3 1 1 83 18 58767467 58768832 ACACTTTCAGGTGGAAAGG 59 58768879 58768897 TTGCTTCCTGGATGAAGTC 59 NA Mus musculus 50 Slc16a3 ENSMUSG00000025161 ENSMUST00000070653,ENSMUST00000100130 3 2 2 188 11 120815573 120816548 TCAGTTCTTGGTGAAAGCA 59 120816700 120816718 AACTCATGCATAAGCTCCT 58 NA InUTR Mus musculus 50 Sufu ENSMUSG00000025231 ENSMUST00000111867,ENSMUST00000039922,ENSMUST00000111866 1 3 3 81 19 46524453 46525078 TTCCTCCAGATTGTTGGTG 59 46525123 46525141 GTAGTAGTTCCAGGATGCC 59 NA Mus musculus 50 Jarid1c ENSMUSG00000025332 ENSMUST00000112584,ENSMUST00000112588,ENSMUST00000082177 2 3 3 82 X 148683295 148683314 CATTCCAAAGAATTTGGCAG 57 148683359 148687980 CTTGTAGCATACTCCTCCT 57 NA Mus musculus 50 Crisp4 ENSMUSG00000025774 ENSMUST00000026876,ENSMUST00000115340,ENSMUST00000115344,ENSMUST00000115339 1 4 4 80 1 18120325 18124132 CATGCTGAAAGTGAGTTGG 59 18120263 18120281 TCACTGTCTGACTTGTCAC 59 NA Mus musculus 50 Taf3 ENSMUSG00000025782 ENSMUST00000114906 3 1 4 159 2 9839823 9840381 CTCAGATCCGTGATGAGTG 59 9838046 9838064 AACCACTGCATCTCTTCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 4921521F21Rik ENSMUSG00000025955 ENSMUST00000069142 1 1 1 80 1 65077187 65077205 CATGGAACTAAGTGATGGC 58 65072288 65077144 ACCATACTCTTGGAAACCTC 59 NA Mus musculus 50 Zfp142 ENSMUSG00000026135 ENSMUST00000027313 2 1 5 81 1 74634190 74634208 GCCTCCACTTTACAGACAG 59 74632261 74634145 TCTCCTAAATGCGTGTAGC 59 NA InUTR Mus musculus 50 Rhbdd1 ENSMUSG00000026142 ENSMUST00000027322 2 1 1 88 1 82374204 82374222 TATGATGTCTACACAGCGG 58 82374273 82439450 TTTCTGGTATTTCCTCGGTC 59 NA Mus musculus 50 Psmd1 ENSMUSG00000026229 ENSMUST00000113330,ENSMUST00000027432 3 2 2 80 1 87986696 87986715 CATTGCGTTAGTGATGTACG 59 87986758 87988588 AGAATTGGGTCCTTGTCAC 59 NA Mus musculus 50 Akp5 ENSMUSG00000026246 ENSMUST00000027455 2 1 1 80 1 88985058 88985291 TGGACATTGATGTGATCCT 58 88984996 88985015 TGTCAGTTGGATATTCCTGG 59 NA Mus musculus 50 Tnni1 ENSMUSG00000026418 ENSMUST00000027674 2 1 1 275 1 137701634 137701652 AATCCAAGATCACTGCCTC 59 137704185 137705225 GCTTCAGGTCCTTGATCTC 59 NA DesignRelaxed Mus musculus 50 Spata17 ENSMUSG00000026611 ENSMUST00000110950,ENSMUST00000027908,ENSMUST00000110945,ENSMUST00000068313 3 4 4 81 1 189017856 189017875 AAATTCGAGAATGATGCAGC 59 189016889 189017814 TGTTCAAGTGCCTCATATAGG 59 NA Mus musculus 50 Rabgap1l ENSMUSG00000026721 ENSMUST00000028052 3 1 5 87 1 162156801 162161934 CAGTAAAGGGTAAGATGATGG 57 162156734 162156752 TCTCTATTTACGGCCACTG 58 NA Mus musculus 50 4921504E06Rik ENSMUSG00000026734 ENSMUST00000062060,ENSMUST00000028067 3 2 2 88 2 19461952 19461972 GACTTAAAGAGGAGTCTTGGA 58 19455452 19461902 GATATCTTCTCCCTGCTGG 58 NA Mus musculus 50 Rbm18 ENSMUSG00000026889 ENSMUST00000028251 1 1 1 80 2 35976378 35976399 ATGATAAGATCCTTCCCATCAG 59 35973481 35976337 TCTTTGCAGTGACACTGAG 59 NA Mus musculus 50 Pax8 ENSMUSG00000026976 ENSMUST00000102940,ENSMUST00000028355 2 2 2 82 2 24296650 24296670 TCTACCTACTCTATCAACGGG 59 24296326 24296606 TCCTGGTCACTATCATCCA 59 NA Mus musculus 50 Xirp2 ENSMUSG00000027022 ENSMUST00000112347,ENSMUST00000028410 3 2 2 96 2 67357326 67357344 TTTATCCAATGGAGTGCCT 58 67357404 67362840 TAATTTCCCAAGCTCAGCT 58 NA Mus musculus 50 Chst1 ENSMUSG00000027221 ENSMUST00000065797 3 1 2 156 2 92451967 92453304 TTGAATTCCAGAAGACCCG 59 92453424 92453442 CAAGTGTGGAAAGACTTGG 58 NA DesignRelaxed, InUTR Mus musculus 50 Mdk ENSMUSG00000027239 ENSMUST00000111310 1 1 5 170 2 91771396 91771531 AAGAGAAGGTGAAGAAGGG 58 91770264 91771263 CTTTCTTGGCTCCAAATTCC 59 NA Nonspecific Mus musculus 50 Mdk ENSMUSG00000027239 ENSMUST00000111310 2 1 5 170 2 91771396 91771531 AAGAGAAGGTGAAGAAGGG 58 91770264 91771263 CTTTCTTGGCTCCAAATTCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ttbk2 ENSMUSG00000027284 ENSMUST00000110701 1 1 6 190 2 120546715 120546733 CTCTACAGGATGTGCTCTC 58 120546331 120546477 CTGGTCTGCAACTAGAAGG 59 NA Mus musculus 50 Ivd ENSMUSG00000027332 ENSMUST00000028807 2 1 1 83 2 118703670 118706193 CATTCAGTGTCTAGGTGGA 58 118706240 118706258 CCGATCTCATACAGTTTGG 57 NA Mus musculus 50 Usp50 ENSMUSG00000027364 ENSMUST00000028842,ENSMUST00000110405 1 2 2 85 2 126605852 126606132 TCTTAAGAAGGACTGCAGTG 59 126605786 126605804 GTGAGACACAGTCTGAGTC 59 NA Mus musculus 50 Tgm6 ENSMUSG00000027403 ENSMUST00000028888 1 1 1 91 2 129963153 129963171 TACGTGCTTAACGACAGTG 59 129963226 129964577 ATGTCCTCTTCAAACTGCC 59 NA Mus musculus 50 Nfs1 ENSMUSG00000027618 ENSMUST00000029147,ENSMUST00000109600 2 2 2 76 2 155969118 155969136 TCTCTACATGGACGTACAG 57 155967936 155967954 AGTTGACAAGGTATGGGAG 58 NA DesignNoJunction Mus musculus 50 Zfp639 ENSMUSG00000027667 ENSMUST00000029203,ENSMUST00000116344 1 2 2 81 3 32414262 32415959 TCTCGCTATTCAGATTCTTCTG 59 32415999 32416019 AGACACTGTAACAGTGATCAG 59 NA Mus musculus 50 Ppid ENSMUSG00000027804 ENSMUST00000029382 3 1 1 160 3 79401648 79401666 CAATACGAATGGCTCTCAG 57 79401789 79402726 CAATAACACAGAGTTTGGCA 58 NA Mus musculus 50 2810403A07Rik ENSMUSG00000028060 ENSMUST00000029696 3 1 1 84 3 88493157 88493178 GAAGTAGAAATCAATGACGTGC 59 88493223 88493561 CACTAAGCCGACTGATCTC 59 NA Mus musculus 50 Bdh2 ENSMUSG00000028167 ENSMUST00000029817 3 1 1 84 3 134951233 134951251 AAGAGAAGGAGCCAAAGTC 59 134951299 134952532 TCGAGTTTGAATACCTCGG 59 NA Mus musculus 50 Spaca1 ENSMUSG00000028264 ENSMUST00000108148,ENSMUST00000084734 1 2 3 105 4 34115525 34116053 ATCATCATAAATTGGGCGG 57 34112102 34112120 TATCCTTGTCTTGTTCGCA 58 NA Mus musculus 50 2700059D21Rik ENSMUSG00000028291 ENSMUST00000084299 2 1 1 167 4 34512440 34512458 TTGGAATGATCTGTGAACG 57 34513244 34513472 ATGAAACATAACTAGCAGGC 57 NA Mus musculus 50 Orm3 ENSMUSG00000028359 ENSMUST00000006687 2 1 1 80 4 63017738 63017953 ATCACACCAAAGATGACCA 58 63017997 63018015 CATACTTGAAGAGGGTCCC 59 NA Mus musculus 50 Kif24 ENSMUSG00000028438 ENSMUST00000108055,ENSMUST00000030148,ENSMUST00000051409 2 3 3 100 4 41370665 41375392 TCATTCTTGTGTCAGGCAG 59 41370583 41370604 GTACTTCCCTTACACCTAAAGG 59 NA Mus musculus 50 2310028H24Rik ENSMUSG00000028439 ENSMUST00000108049,ENSMUST00000108052 2 2 3 60 4 41467970 41467990 CTTTGACATGTCCAGATACTC 58 41467417 41467948 ATCTTGGTTGATCTGCTCG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ccdc28b ENSMUSG00000028795 ENSMUST00000030586,ENSMUST00000106035 1 2 2 80 4 129298277 129298295 TTATGAGATGGAGGGAGGA 58 129298108 129298233 GAACATTCCTTCCCAAAGG 58 NA Mus musculus 50 Tmem57 ENSMUSG00000028826 ENSMUST00000030628 1 1 1 84 4 134393816 134393834 GATTTGAATACCTGTGGCC 58 134392351 134393768 AATACTGAGAAGGCCAGTC 58 NA Mus musculus 50 Psmb2 ENSMUSG00000028837 ENSMUST00000030642 3 1 1 102 4 126361481 126364285 GCGGAATGGATATGAATTGTC 59 126383305 126383325 GAGGAGGTTCACATGATATGG 59 NA Mus musculus 50 Tmub1 ENSMUSG00000028958 ENSMUST00000030799,ENSMUST00000115033,ENSMUST00000115036 1 3 3 113 5 23952395 23952413 CTCAATGACTCTGAGCAGG 59 23952040 23952058 TTGACCTTGGTAGATGAGC 58 NA DesignNoJunction Mus musculus 50 Agtrap ENSMUSG00000029007 ENSMUST00000030865 2 1 1 60 4 147455858 147456389 CATAGGCATGTTTCTTGGTG 59 147455817 147455838 GCTAATGTAGATAATGTCCAGG 58 NA DesignRelaxed Mus musculus 50 Slc26a5 ENSMUSG00000029015 ENSMUST00000030878,ENSMUST00000115176 1 2 2 80 5 21319713 21319733 TCATTCTAGACTTTACGCAGG 59 21319179 21319674 CTCCATATTCTTTCACAATCCC 58 NA Mus musculus 50 Ski ENSMUSG00000029050 ENSMUST00000084103,ENSMUST00000030917,ENSMUST00000105629 1 3 3 80 4 154533442 154533461 AAATGCGAGTTAAGCAAGAG 58 154532270 154533399 GCAAGAATTCTAGCTCCTG 57 NA Mus musculus 50 Prkg2 ENSMUSG00000029334 ENSMUST00000031277 1 1 1 81 5 99399006 99399024 AAAGCAGCAAGAACATGTC 58 99396823 99398962 AGTACGATACAACTTCACGA 58 NA Mus musculus 50 Crybb1 ENSMUSG00000029343 ENSMUST00000112378 1 1 3 80 5 112692658 112696344 AGGTGTAAAGATTCCCAGG 58 112696388 112696406 CTCTTGGATCTCCATGGTG 59 NA Nonspecific Mus musculus 50 Rhof ENSMUSG00000029449 ENSMUST00000031401 3 1 1 143 5 123570433 123570531 GTCCTCATCAAGTGGTTCC 59 123570308 123570327 TGTGTAGGTAATAGGCTCCA 59 NA Mus musculus 50 Foxp2 ENSMUSG00000029563 ENSMUST00000115477,ENSMUST00000031545,ENSMUST00000115472 1 3 4 80 6 15355633 15359750 TCCCAAACCTCTAAATCTGG 59 15359793 15359811 GTTTGAGGTAAGCTCTGTG 58 NA Nonspecific Mus musculus 50 Wnt16 ENSMUSG00000029671 ENSMUST00000069255 1 1 2 76 6 22241176 22241194 ATCTACACAACAACGAAGC 58 22244296 22244314 TTAAGCAGTTAGTGTGGGC 59 NA DesignNoJunction Mus musculus 50 Csda ENSMUSG00000030189 ENSMUST00000111988,ENSMUST00000032309,ENSMUST00000087865,ENSMUST00000081659 1 4 4 130 6 131318407 131318426 TTTCACAAGATGGCAAAGAG 58 131315410 131317787 ATTCTTTAGGTCACCCTGC 59 NA Mus musculus 50 Tacc2 ENSMUSG00000030852 ENSMUST00000084513,ENSMUST00000033140,ENSMUST00000059145,ENSMUST00000033141,ENSMUST00000098004 1 5 5 148 7 137902704 137902722 CTCCCACCAAACTGTACAG 59 137902833 137903060 ACACCTCTTCATTCTTTCGA 58 NA Mus musculus 50 Prickle3 ENSMUSG00000031145 ENSMUST00000033485 3 1 2 89 X 7235823 7236670 ATGGCTGGAGAAAGATCTG 59 7236723 7236741 ACATGATGCGTTCTAGGTC 59 NA Mus musculus 50 Mecp2 ENSMUSG00000031393 ENSMUST00000033770,ENSMUST00000100750 2 2 2 139 X 71282356 71282375 TTAAACAAAGGAAGTCTGGC 58 71281749 71281767 ATCATTAGGGTCCAAGGAG 58 NA DesignNoJunction Mus musculus 50 Odz3 ENSMUSG00000031561 ENSMUST00000033965 1 1 1 80 8 49384389 49384955 GATGGAATGTTTGACTTGGTG 59 49384329 49384347 GTACTGAGTGAGGAATGGG 59 NA Nonspecific Mus musculus 50 Txnl4b ENSMUSG00000031723 ENSMUST00000034159 2 1 1 136 8 112095409 112096598 AAGGTGGATTATGGGTCTC 58 112096697 112096716 GGATCAATAGGACTCTGGAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 2310022B05Rik ENSMUSG00000031983 ENSMUST00000034464 2 1 1 60 8 127175296 127175314 CTTGGCAAGATGAACACTC 58 127163499 127175274 CTGAATTCCATCTGACTCCTC 59 NA DesignRelaxed Mus musculus 50 Tex9 ENSMUSG00000032219 ENSMUST00000074318,ENSMUST00000085358 3 2 2 85 9 72326204 72326223 AGATCCGATTTCTAAAGGCC 59 72325709 72326159 TTTATCCTCCTTCTTACTGCAC 59 NA Mus musculus 50 Commd4 ENSMUSG00000032299 ENSMUST00000065358 2 1 1 94 9 57004095 57004337 CTGATGCCAAGTTTGAGTC 58 57004019 57004037 ATCACTGTCGACACTATGC 59 NA Mus musculus 50 Ooep ENSMUSG00000032346 ENSMUST00000034900 1 1 1 103 9 78225851 78225869 ATCTTTGGACAACCCAGTG 59 78225483 78225784 TCTTTCACCTTCACAGCTC 59 NA Mus musculus 50 Oas1d ENSMUSG00000032623 ENSMUST00000044224 2 1 1 90 5 121365882 121365900 TTCTGAGCTTCAAGCTGAG 59 121365953 121366860 TGTCTTACTTCATACAGGGC 59 NA Mus musculus 50 Pon2 ENSMUSG00000032667 ENSMUST00000057792,ENSMUST00000047700 2 2 2 125 6 5227918 5239021 AAGGAATCGAAACTGGAGC 59 5223106 5223124 TCATCAGTATCCCTCCAGG 59 NA Mus musculus 50 Mier3 ENSMUSG00000032727 ENSMUST00000109272,ENSMUST00000109270,ENSMUST00000109271,ENSMUST00000047412 2 4 4 80 13 112504508 112504527 ACGCTATGATTACTTTGCTC 58 112504570 112504664 TCCATGTAGTCCGTAACAC 58 NA Mus musculus 50 Centd2 ENSMUSG00000032812 ENSMUST00000107011,ENSMUST00000107010,ENSMUST00000098246,ENSMUST00000084896,ENSMUST00000084895,ENSMUST00000098243 2 6 6 86 7 108549428 108549446 GTATCGAGAGCTCTTGGTG 59 108549495 108549915 AAGCACTGTACACAGTACAG 59 NA Mus musculus 50 Trim33 ENSMUSG00000033014 ENSMUST00000029444,ENSMUST00000106860 3 2 2 83 3 103152245 103152263 AATGTGAACGTCTTCTGCT 59 103152309 103155935 AGTTTGGTATCGAAACAGGA 58 NA Mus musculus 50 Slc7a6os ENSMUSG00000033106 ENSMUST00000035925 2 1 1 82 8 108725046 108726145 ATGAAGATTCCAGAGGCTC 58 108724982 108725001 GTATTTGCTCCACATCAGTC 58 NA Mus musculus 50 Pxk ENSMUSG00000033885 ENSMUST00000036682,ENSMUST00000112689 3 2 2 81 14 8984081 8984599 ATCTTAGCTCGAAAGAAGTC 57 8984642 8984661 AGTTATTGGAGTTACTGTGC 57 NA Mus musculus 50 Thoc5 ENSMUSG00000034274 ENSMUST00000101615,ENSMUST00000109903,ENSMUST00000038237 1 3 3 80 11 4822015 4822147 ATGAAGATTACATGGAGCTG 57 4822190 4822208 CCAGGTAGTAGAGATTGGT 57 NA Mus musculus 50 Ly6g5c ENSMUSG00000034482 ENSMUST00000037849 2 1 1 138 17 35247763 35248739 GCACATAAAGAACAGCAGC 59 35248841 35248859 GAAATCCAGGAAGCAACAC 59 NA Mus musculus 50 Tmem109 ENSMUSG00000034659 ENSMUST00000038128 1 1 1 134 19 10948732 10948751 CCATGCATGTGATTTCAGAG 59 10946628 10947083 TGAGTTGTTCACCATCCAG 59 NA Mus musculus 50 Baz1a ENSMUSG00000035021 ENSMUST00000038926 3 1 1 80 12 56042534 56042553 CTTTCATCTTCAGTCCTGCT 59 56036553 56042491 TAGCAATGCTGTCTTCCTG 59 NA Mus musculus 50 1810055G02Rik ENSMUSG00000035372 ENSMUST00000039048 2 1 1 82 19 3715795 3716501 AGAGCCACGAAACATAGTC 59 3716546 3716565 TATCAGTCCTTGGAACTGTG 59 NA Mus musculus 50 Fignl1 ENSMUSG00000035455 ENSMUST00000047689 3 1 2 86 11 11706149 11706168 ATAGACCTTGCTTCACTTGG 59 11703050 11706103 TCTCCATGTCAAAGGTTTAGAG 59 NA InUTR Mus musculus 50 BC051227 ENSMUSG00000035559 ENSMUST00000038626 1 1 1 108 8 73282920 73283023 CTATCTGAAGTACTGGGTCC 58 73282831 73282849 GTAATCTCCTGTGGGAGTG 59 NA InUTR Mus musculus 50 Ddx11 ENSMUSG00000035842 ENSMUST00000038387 3 1 1 81 17 66499381 66499678 AATCAGACACTTCCTAGGAC 58 66499719 66499740 GGTTTATAGCCTTCATACACAG 58 NA Mus musculus 50 BC021523 ENSMUSG00000035900 ENSMUST00000088931,ENSMUST00000044582,ENSMUST00000109398 1 3 3 80 15 85957440 85957459 CTAACTTCGTGAAGAACCTG 58 85957502 85957989 TCATGTATACCGTGAAGGC 59 NA Nonspecific Mus musculus 50 Abpe ENSMUSG00000036521 ENSMUST00000038835 2 1 1 118 7 32088645 32088663 TTTGATCCTACTGTGGAGG 58 32088743 32089760 GAGCTGAAGAGTATAGTTGTC 57 NA DesignNoJunction Mus musculus 50 Tbc1d9b ENSMUSG00000036644 ENSMUST00000101270,ENSMUST00000093138 1 2 2 82 11 49953995 49958538 AAGATACACGGCATCATCG 59 49958584 49958602 TCTGCCTCCTTGAATTTCC 59 NA Mus musculus 50 Zcchc12 ENSMUSG00000036699 ENSMUST00000048067,ENSMUST00000115256,ENSMUST00000115258 2 3 4 132 X 33736551 33736780 TTGTAGAGCTGGTCTTGAG 58 33736875 33736894 GGGAAACTGGAGTATTTCCA 59 NA InUTR Mus musculus 50 Papd5 ENSMUSG00000036779 ENSMUST00000066748 1 1 1 80 8 90776117 90776135 TGCCACGTATAGAGATTGG 58 90776179 90776297 GTAACACCATTTCCGTTGC 59 NA Mus musculus 50 Gjd4 ENSMUSG00000036855 ENSMUST00000041007 2 1 1 60 18 9280459 9280477 AGGAGAAAGACACTGAGGA 59 9280417 9280435 CTTCACAGACTGGTCTAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fgf2 ENSMUSG00000037225 ENSMUST00000091203 3 1 3 187 3 37279921 37295125 TTCAAACTACAACTCCAAGC 58 37303598 37303616 CTGGAGTATTTCCGTGACC 59 NA DesignNoJunction Mus musculus 50 Solh ENSMUSG00000037326 ENSMUST00000041641 3 1 1 109 17 26101044 26101062 CAGGGAGAGTATGCATGTG 59 26100382 26100974 CCACAAAGTTCACACTATTCTC 59 NA Mus musculus 50 Tnfrsf23 ENSMUSG00000037613 ENSMUST00000035742,ENSMUST00000097931 2 2 2 80 7 150867414 150867433 CATACTCCTTCAACTGTCCC 59 150865967 150867371 TGACAAATGTACCTGAGGG 58 NA Mus musculus 50 Actr5 ENSMUSG00000037761 ENSMUST00000045644 3 1 1 70 2 158453927 158453945 AGGAGCATAGCTACATTGC 59 158457215 158457233 CTCGTAGTAATCGGGACAC 59 NA DesignNoJunction Mus musculus 50 Cpe ENSMUSG00000037852 ENSMUST00000048967 1 1 1 86 8 67087897 67087915 CAAGAATGACGATGACAGC 58 67085524 67087847 TTGAAGTCTTGCATTCCAC 58 NA Mus musculus 50 2010002N04Rik ENSMUSG00000038059 ENSMUST00000042710 2 1 1 60 18 60635125 60635143 CATTGTCATCATGACCTCC 57 60635083 60635102 CATTCGATAGATGATGACCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 D530005L17Rik ENSMUSG00000038070 ENSMUST00000047023,ENSMUST00000102819 2 2 3 85 4 84593473 84593491 AATCTGAAGCCAAAGACAG 57 84593540 84602191 TACAGATTCAGTCTGCTCC 58 NA Mus musculus 50 Atg5 ENSMUSG00000038160 ENSMUST00000039286 1 1 1 80 10 44009787 44014410 CCCTGAAATGGCATTATCC 58 44014454 44014472 GTACTGTGATGTTCCAAGG 57 NA Mus musculus 50 Pigu ENSMUSG00000038383 ENSMUST00000099167,ENSMUST00000077626 2 2 2 87 2 155156944 155156962 CCAGTATGCTCCAGATGTG 59 155154408 155156893 TAGGAGATAGAACAGGGCC 59 NA Mus musculus 50 Fcrla ENSMUSG00000038421 ENSMUST00000046322 1 1 1 102 1 172852426 172852444 AGATGATGGCGATATGACC 58 172851905 172852360 GATCAGCCAGTCATAGGAC 59 NA Mus musculus 50 Nepn ENSMUSG00000038624 ENSMUST00000067085 2 1 1 150 10 52121049 52123711 GTTGTCTATCCCTCTGAGG 58 52123824 52123843 GAAATCTAAGGCCGAGATCC 59 NA DesignNoJunction Mus musculus 50 Gngt2 ENSMUSG00000038811 ENSMUST00000107712,ENSMUST00000107714,ENSMUST00000107711,ENSMUST00000100532,ENSMUST00000036088,ENSMUST00000107709,ENSMUST00000107708 1 7 7 81 11 95706443 95706803 CCACGTGATCTGATTTCCA 59 95706847 95706866 CTTTGAGAAGAGGGTCTGTC 59 NA Mus musculus 50 Ak5 ENSMUSG00000039058 ENSMUST00000045262 2 1 1 80 3 152316704 152318847 TCATTCTTGTCATAGGTGGT 58 152316643 152316661 TGTACTGGAATCCATACCG 58 NA Mus musculus 50 Gipc2 ENSMUSG00000039131 ENSMUST00000046614 2 1 1 154 3 151770944 151770962 TACTTCAAGAGGGACCCTC 59 151757245 151765589 CAAACATGGTTGTAGCTAAGTC 59 NA Mus musculus 50 Zdhhc1 ENSMUSG00000039199 ENSMUST00000044286 1 1 1 80 8 108000029 108000284 CCACATTTATCTAATGTGGCAC 59 107999970 107999988 GTCTCCTTTGCTTCCTGAG 59 NA Mus musculus 50 C130074G19Rik ENSMUSG00000039349 ENSMUST00000048308 2 1 1 124 1 186698256 186698274 GTACATTGTCATTGGCCTG 58 186698150 186698168 AGAAGCATTCTGGTGTCAC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ccdc81 ENSMUSG00000039391 ENSMUST00000041195 3 1 1 80 7 97030852 97030870 AGAAACGACAATGAGAGGC 59 97030259 97030809 ATAGCACATTTCCTGTCCTG 59 NA Mus musculus 50 4732454E20Rik ENSMUSG00000039508 ENSMUST00000048052 1 1 1 63 10 33763558 33763576 CTCCCTCTGATGTGATTCC 59 33761697 33763532 ATTTGTGACTGGTATCTGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Mrpl12 ENSMUSG00000039640 ENSMUST00000043627 2 1 1 101 11 120346644 120346664 TAATGCTCCCAAAGAATACCC 59 120346726 120346971 TTCTTCAGGAGTTCGTTGAG 59 NA DesignNoJunction Mus musculus 50 Dock3 ENSMUSG00000039716 ENSMUST00000044532 3 1 1 80 9 106891790 106891808 AATACTTCCACTTCCGACC 58 106888396 106891747 GGATGAGCTCCTTATATGCC 59 NA Mus musculus 50 Slc6a5 ENSMUSG00000039728 ENSMUST00000056442,ENSMUST00000107605 1 2 2 80 7 57193759 57197146 CAACTGCTACAGGGATACG 59 57197189 57197208 ACAGAGAAGATGACAAACCC 59 NA Mus musculus 50 Lrrc17 ENSMUSG00000039883 ENSMUST00000035651 1 1 1 83 5 21076180 21080787 GTTTATAGATCCTGCTGCCT 59 21080833 21080851 TAGTCAAAGTTCTGCAGGC 59 NA Mus musculus 50 Stk32a ENSMUSG00000039954 ENSMUST00000045477,ENSMUST00000064055 1 2 2 80 18 43402717 43402737 AGGAATGTCTTCAAGGAACTC 59 43402777 43420917 ATCTTGGAAGGAATACCACAG 59 NA Mus musculus 50 Cd209c ENSMUSG00000040165 ENSMUST00000044060 2 1 1 80 8 3944175 3944898 GATGATGAACAGAGCTTCCT 59 3944114 3944132 TTCATGCTTCAGGTCTGAC 59 NA Mus musculus 50 4933424B01Rik ENSMUSG00000040250 ENSMUST00000032427 2 1 1 80 6 146508724 146510260 TCCTATGAAGGAAGAGCAG 58 146508662 146508681 TCTACATGTGCATCTTTGTG 58 NA Mus musculus 50 Stac3 ENSMUSG00000040287 ENSMUST00000035839 3 1 1 106 10 126945265 126945444 GAAGGACCAGATCGTAGTG 59 126945514 126945532 AAATCTCCTCCAGGAAGTC 58 NA Mus musculus 50 Blvrb ENSMUSG00000040466 ENSMUST00000037399 2 1 3 187 7 28233210 28244287 AAGCAGGTTATGAGGTGAC 59 28244436 28244598 CATTACTGTAGTGGGACTGAG 59 NA Mus musculus 50 Padi6 ENSMUSG00000040935 ENSMUST00000038749,ENSMUST00000105796 1 2 2 80 4 140284933 140285634 CCTATGTTGAGAAGTGTATCAG 58 140284874 140284892 TCAGGATGATGTCCTTGTC 58 NA Mus musculus 50 4732474O15Rik ENSMUSG00000041886 ENSMUST00000048880 1 1 1 80 12 120688841 120688859 ACTAAGCATCAGATGCAGG 59 120688902 120703947 AGGTTTCCACATCATCTCTG 59 NA Mus musculus 50 Zfp532 ENSMUSG00000042439 ENSMUST00000049016 3 1 1 90 18 65784907 65784928 GTGTTTGGAGTGTAATGAAGTC 59 65784978 65842557 CTTCATTTGTTGTCCACTGG 59 NA Mus musculus 50 Snai1 ENSMUSG00000042821 ENSMUST00000052631 1 1 1 229 2 167364565 167364583 TAACAAGGAGTACCTCAGC 58 167367476 167367494 ATCTCTTCACATCCGAGTG 58 NA DesignNoJunction Mus musculus 50 Mobkl1b ENSMUSG00000043131 ENSMUST00000055261,ENSMUST00000101245 3 2 3 80 6 83284191 83288281 CCTTCTAAGATTGGTGTCCC 59 83288324 83288342 ATAAACCCTGAAGAGACGC 59 NA Mus musculus 50 4930579E17Rik ENSMUSG00000043153 ENSMUST00000062041 3 1 1 80 12 37274533 37414841 CTAAACTACTCACAGGATGAG 57 37414883 37414901 TTCCTTAACTAAGGCAGCT 58 NA Mus musculus 50 Olfr266 ENSMUSG00000043529 ENSMUST00000059486 1 1 1 60 3 106624579 106624598 ATAGCCTGAGAAACAGAGAC 58 106624538 106624557 TCTGACTTCTTACTCAAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Fem1a ENSMUSG00000043683 ENSMUST00000060253 2 1 1 117 17 56397027 56397045 GTACCTCATCCAGGAACAG 59 56397125 56397144 ATACGGTTCTGCTTCTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lmod3 ENSMUSG00000044086 ENSMUST00000095655 3 1 1 192 6 97197328 97197347 GAGAATTCAGCGCAAATCTC 59 97188857 97197173 CAGTTGCACAGGTTTAAGG 58 NA Mus musculus 50 EG212225 ENSMUSG00000044457 ENSMUST00000051224 2 1 1 100 1 46078783 46081757 TAGATGCAGAGTTCATCCC 58 46078701 46078720 TATTGCCATTCACTGATGTC 57 NA InUTR Mus musculus 50 9930014A18Rik ENSMUSG00000044513 ENSMUST00000058584 2 1 1 60 15 60661757 60661776 TCATATTGTTGATGTTGCCG 58 60661799 60661817 CCCAGCTACAATCTCAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rasip1 ENSMUSG00000044562 ENSMUST00000057927 2 1 1 164 7 52890686 52891711 CTACTACCTCACCAAGACTC 58 52891838 52891856 CTGGTCAGTTCTAGAGCTG 59 NA Mus musculus 50 Gm444 ENSMUSG00000044576 ENSMUST00000058045,ENSMUST00000114826,ENSMUST00000114824 1 3 3 65 5 30439937 30440466 ATCACCTTCAGTGTCAAGG 59 30440495 30440513 TGTGAAGTTGTACACCTCG 59 NA DesignNoJunction Mus musculus 50 Col27a1 ENSMUSG00000045672 ENSMUST00000036300 1 1 1 112 4 62882113 62885248 TCCTGAAGATGTGGATGTC 58 62885324 62885342 TGAAGATGAAGCCAGATGG 59 NA Mus musculus 50 NM_147078.2 ENSMUSG00000045701 ENSMUST00000055344 1 1 1 60 2 86263635 86263653 ACTTCTTCCTCAGACACCT 59 86263593 86263611 TTAGGAGCAATGACAGTGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Ifit2 ENSMUSG00000045932 ENSMUST00000102826 1 1 1 87 19 34644851 34647565 CAGTCATGAGTACAACGAG 57 34647616 34647634 TCTTCTGCTATCAGGTTCC 58 NA InUTR Mus musculus 50 Mcart1 ENSMUSG00000045973 ENSMUST00000107796,ENSMUST00000116341 2 2 3 86 4 45417649 45417668 CTAACAATGGACAACACTGG 58 45413035 45417603 GGAAGAGTTTCTTTAACCTGTG 59 NA Nonspecific, InUTR Mus musculus 50 Atxn1 ENSMUSG00000046876 ENSMUST00000091628 3 1 1 92 13 45890878 45890896 ATGAAGGCAAATGGTACAG 57 45793305 45830492 TTAGAAATACCCTCTGCCA 57 NA InUTR Mus musculus 50 Hsp25-ps1 ENSMUSG00000047061 ENSMUST00000054395 2 1 1 114 13 45173831 45173849 AATGGCTATGGGAGATAGG 57 45173927 45173945 CATTCCGATCACTTTCGAG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Tmem93 ENSMUSG00000047260 ENSMUST00000054952,ENSMUST00000108480 3 2 2 61 11 72990040 72990059 CTACGGCTTCATCTTCTACC 59 72989998 72990016 CTTTGAGAATGAGGAGCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 4930518F22Rik ENSMUSG00000047308 ENSMUST00000061860 2 1 1 60 8 24368117 24368135 TGGACCAACAACAGTTCTC 59 24368158 24368177 TGTCTTGCAAAGATACAGTC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Arl4a ENSMUSG00000047446 ENSMUST00000101472,ENSMUST00000051616 2 2 2 61 12 40763268 40763286 GTCCTTTCAGTCCTTTCAC 57 40763225 40763243 AAACTGTTGTCTTTCCAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem41b ENSMUSG00000047554 ENSMUST00000094097 2 1 1 60 7 117124625 117126182 CTCAGCTTAGTGAGGAAGAG 59 117124584 117124602 TTGGCGTCATCCATATCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Apof ENSMUSG00000047631 ENSMUST00000050901 2 1 1 60 10 127706954 127706972 CAACTTCTAACTGGGAGTG 57 127706995 127707014 TATCTCTTGTACGCCAAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 C1galt1c1 ENSMUSG00000048970 ENSMUST00000058265 1 1 1 60 X 35984794 35984814 CAATCCCAACCTTTCTATCTC 58 35984754 35984774 CACTCACATATTCAAGGTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hspe1-rs1 ENSMUSG00000049246 ENSMUST00000051437 1 1 1 297 18 47271855 47271874 AGTTTCTTCTGCTCTTTGAC 58 47272133 47272152 CAACAGTGATTTCAGTTGAC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Trappc1 ENSMUSG00000049299 ENSMUST00000108662 2 1 4 87 11 69137751 69137907 AGGAAGAGGAGTACAAGCT 59 69137958 69138364 TTGTAACGGATGTCTAGCG 59 NA Mus musculus 50 Tmie ENSMUSG00000049555 ENSMUST00000050958 1 1 1 101 9 110770021 110770039 CGGTATCTACAGCGAAAGG 59 110769448 110769957 TTTCTTCTTGTCCTCTCCAG 58 NA Mus musculus 50 Prss33 ENSMUSG00000049620 ENSMUST00000115444 3 1 2 217 17 23972278 23972296 ATTTAGTCCCTTACCTGCT 57 23971835 23971982 TCTAGGGAAACAGTGACCT 59 NA DesignNoJunction Mus musculus 50 Olfr273 ENSMUSG00000049648 ENSMUST00000107670,ENSMUST00000051520 3 2 2 60 4 52869091 52869109 TTTCTTTCTCTGGTTGTGC 58 52869049 52869068 CATTCTGTTGATCCCATTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Krtap9-3 ENSMUSG00000049809 ENSMUST00000062683 2 1 1 63 11 99459386 99459405 CTCTCAACTACACAGCTCTC 59 99459342 99459360 ACAGAAGCTTGTAGCACAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rasl11b ENSMUSG00000049907 ENSMUST00000051937 1 1 1 134 5 74592176 74593304 GAAATGCAGGTAATCTCTACAC 58 74594164 74594182 GAATGCAGCGATTCAACTG 59 NA Mus musculus 50 Klk6 ENSMUSG00000050063 ENSMUST00000107968,ENSMUST00000107966,ENSMUST00000005896,ENSMUST00000107967 3 4 4 106 7 51081474 51082173 TCTTGCTAAATCAGCCTGG 59 51082243 51082261 AGTGACCTGAGGTGTAGAG 59 NA Mus musculus 50 Vamp8 ENSMUSG00000050732 ENSMUST00000059983 3 1 1 100 6 72338322 72338341 TTATGACCCAGAATGTGGAG 59 72335633 72338259 CTTGAAGTGTTCAGACGTG 58 NA Mus musculus 50 EG331392 ENSMUSG00000051537 ENSMUST00000089189 1 1 1 60 X 20939198 20939216 ACAGTTCTGAGGATGAAGC 59 20939240 20939258 TTGCTTAAGGGACTCTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rft1 ENSMUSG00000052395 ENSMUST00000064230 1 1 1 80 14 31495978 31495997 CTTGCTATCAATGGTGTGAC 58 31496038 31502906 CATGGTGAAATTGTACCTGTC 59 NA Mus musculus 50 Gsx1 ENSMUSG00000053129 ENSMUST00000065382 3 1 1 60 5 148001442 148001460 CTCCAACATGTACCTCTCC 59 148001484 148001502 GGACAGGTTCAGATAGGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Styx ENSMUSG00000053205 ENSMUST00000095952,ENSMUST00000111835 3 2 2 82 14 45988133 45990700 GGGATGAAATACAGAGATGCA 59 45990744 45990762 AGTTGGTGGACAAATCCAG 59 NA Nonspecific Mus musculus 50 Mapk14 ENSMUSG00000053436 ENSMUST00000114754,ENSMUST00000114758,ENSMUST00000004990,ENSMUST00000062694,ENSMUST00000114757,ENSMUST00000114752 3 6 6 80 17 28862446 28862464 TTCGGCTGACATAATTCAC 57 28862781 28865312 AAATCCAGAATCTTGAGCTC 57 NA Mus musculus 50 ENSMUSG00000053474 ENSMUSG00000053474 ENSMUST00000037107 2 1 1 265 18 80453741 80453759 GGGTATGTACGGTACTACC 58 80453494 80453513 GTGCTTTATCTTTGTTTCCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ptrh1 ENSMUSG00000053746 ENSMUST00000066352 2 1 2 67 2 32632537 32632648 CTGAACTCCAATGCAATGC 59 32632679 32632697 TCCACCATATTAGGGTGTG 58 NA DesignRelaxed Mus musculus 50 Iigp1 ENSMUSG00000054072 ENSMUST00000032473,ENSMUST00000066912 2 2 2 60 18 60550335 60550357 CCTAGTGAATATCATCCCTTCTC 59 60550376 60550395 CTTCAGAGTCTCCAAATCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Skp2 ENSMUSG00000054115 ENSMUST00000096482,ENSMUST00000110585 1 2 2 80 15 9053753 9054826 GAAAGCTTCAGCTCTTTCC 58 9053691 9053710 CAGAATCTTATGGAGGTTCG 57 NA Mus musculus 50 ENSMUSG00000054339 ENSMUSG00000054339 ENSMUST00000067349 1 1 1 60 17 16152031 16152052 AGACTATGAGCATGACATATCC 59 16152071 16152091 CCTCTTATCACTCCATCATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mettl7a ENSMUSG00000054619 ENSMUST00000108962 1 1 2 60 15 100135729 100135748 AGAACCAGGAGAAGATTCTG 58 100135771 100158662 TTGTAGAGATAGACCGGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mtnr1a ENSMUSG00000054764 ENSMUST00000095329 3 1 2 60 8 46170937 46170955 ACGGTTCTTCTTTCCTGTC 59 46170979 46172552 CCCAGACGGATATAAAGGG 58 NA DesignNoJunction Mus musculus 50 2610024B07Rik ENSMUSG00000055593 ENSMUST00000069256 1 1 1 130 7 120047857 120047875 TATTCATGAGAGCACCGAG 58 120047969 120047987 ACACAGACACAAGAGTTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Taar1 ENSMUSG00000056379 ENSMUST00000051532 3 1 1 60 10 23640544 23640563 CCACTTAGCTTTCATTTCCA 58 23640585 23640604 TTTGTATCTCAAAGGGTCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 BC051142 ENSMUSG00000057246 ENSMUST00000114169,ENSMUST00000097347 2 2 7 156 17 34574133 34574151 AAGTCCTTATCCGAACCTC 58 34580391 34580991 TACATTGTACAATAGGTCCAGG 59 NA Mus musculus 50 EG668236 ENSMUSG00000057805 ENSMUST00000078832 1 1 1 71 X 88821217 88821235 ATAAGACCATGCCTCTGAG 58 88821164 88821183 CTTCTTAGTTGCTTTCACCA 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Btnl4 ENSMUSG00000058435 ENSMUST00000080904 3 1 3 117 17 34606703 34606722 GACTTTCACTCTGGATCCAG 59 34606603 34606623 ATGCCTAACACAGAAGAGG 58 NA Mus musculus 50 EG544864 ENSMUSG00000059605 ENSMUST00000077293 3 1 1 98 12 52931085 52931104 CTTCCGTAGTTATTCCCGTC 59 52931165 52931183 CTCTAGTGTCACGGTTACG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Prpf40a ENSMUSG00000061136 ENSMUST00000076313 3 1 1 82 2 53003868 53003888 CAGCGTTTGAGGATATAACTC 58 53001052 53003824 CTGACATTCATGCTCAAGC 59 NA Mus musculus 50 4930534B04Rik ENSMUSG00000061533 ENSMUST00000021341,ENSMUST00000042048 3 2 3 81 12 92257841 92260853 TCAAAGACTTCAGAGGTGC 59 92257778 92257796 ACAGAATCTCCGTGAAGAC 59 NA Mus musculus 50 Gpr114 ENSMUSG00000061577 ENSMUST00000074570 3 1 1 82 8 97465615 97465633 CTTCTTCTCCTTCGGTGTG 59 97465676 97465946 GGAAGAGGAAGAAACCATAGAG 59 NA Mus musculus 50 Ppef1 ENSMUSG00000062168 ENSMUST00000071204 1 1 1 80 X 157071259 157072949 TGATGGAAAGGTCATTACTG 57 157071198 157071217 CTTAGTCTGATGTAAGCTCC 57 NA Mus musculus 50 Tnfaip8 ENSMUSG00000062210 ENSMUST00000115429 2 1 1 61 18 50250365 50250384 CTTACAGAAACTTTGCGACG 59 50250408 50250426 CGCAAGCTCATATGTTCTC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ppia ENSMUSG00000062933 ENSMUST00000071781 1 1 1 60 9 96796231 96796252 CCTTTCACAGAATTATTCCAGG 59 96796272 96796291 CCATTATGGCGTGTAAAGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Nmral1 ENSMUSG00000063445 ENSMUST00000079130 1 1 3 80 16 4711676 4713653 TACATCATGCCAAGGACTC 59 4711614 4711632 AGAATCCACCATGTCTGTC 58 NA Mus musculus 50 Sepp1 ENSMUSG00000064373 ENSMUST00000082424 2 1 1 80 15 3227207 3227225 TCCCATATGTTGAAGAAGC 57 3227269 3229114 CATCTTCAAGACTCGTGAG 57 NA Mus musculus 50 mmu-let-7i ENSMUSG00000065406 ENSMUST00000083472 1 1 1 60 10 122422750 122422768 GTAGTTTGTGCTGTTGGTC 58 122422708 122422726 TAGCTTGCGCAGTTATCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-26a-2 ENSMUSG00000065430 ENSMUST00000083496 3 1 1 60 10 126432594 126432614 CTGGATTCAAGTAATCCAGGA 59 126432635 126432654 CAAGTAATCAAGAACAGGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-26a-1 ENSMUSG00000065513 ENSMUST00000083579 3 1 1 60 9 118940928 118940948 GTTCAAGTAATCCAGGATAGG 57 118940968 118940988 GTGCAAGTAACCAAGAATAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Prpf4 ENSMUSG00000066148 ENSMUST00000084524 3 1 1 87 4 62080326 62080346 GATATTGAAGGCCATACAGTG 58 62080395 62083225 ATGAACGGTCATAACAGGT 58 NA Mus musculus 50 Olfr559 ENSMUSG00000066272 ENSMUST00000084816 3 1 1 88 7 109872132 109872150 TATGTGTACCTTGTGGTGC 59 109872062 109872080 AGAACTTTGAACATGGCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Bpil3 ENSMUSG00000068009 ENSMUST00000088955 1 1 1 80 2 153734954 153736459 CTATGGACAGTTTATTGAGCCT 59 153737200 153737219 TGATGAAGCCAGTTAACTCC 59 NA Mus musculus 50 Clk2 ENSMUSG00000068917 ENSMUST00000090927 1 1 1 80 3 88974317 88977302 TCCTGACAACAAGAACCTC 59 88977344 88977364 AGAAGCTCAAAGGAGATACAC 59 NA Mus musculus 50 2610019A05Rik ENSMUSG00000069631 ENSMUST00000106871,ENSMUST00000007444 2 2 5 169 11 106045883 106045903 GGCTTAAGAGATTTGGAACTG 58 106034679 106035001 AACCCTTTGCCTATGATGG 59 NA Mus musculus 50 Mrgprb3 ENSMUSG00000070546 ENSMUST00000094383 3 1 1 60 7 55899064 55899082 GAATTTGCTTTCCATCACC 57 55899022 55899042 CCACAGCACTATGATATTCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pla2g4d ENSMUSG00000070719 ENSMUST00000094665 1 1 1 80 2 120096103 120096339 TTCTGGAAGGTATCTGGAG 57 120096041 120096059 TTGAGTCTTTCCCATAGGT 57 NA Mus musculus 50 Ifna4 ENSMUSG00000070904 ENSMUST00000094973 2 1 1 60 4 88487844 88487863 TGCCTCACACTTATAACCTC 59 88487885 88487904 CTTCTCATTTCTTCCAGGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ccl21b ENSMUSG00000071003 ENSMUST00000095114 2 1 1 60 4 42786922 42786942 CTCTAAGTCTGGAAAGAAAGG 57 42786800 42786900 CTGTGTCTGTTCAGTTCTC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 D630040G17Rik ENSMUSG00000071064 ENSMUST00000098614,ENSMUST00000095242 3 2 3 89 8 81660487 81660505 CAATCACCATTCACCTCCA 59 81660558 81699745 AATCTTCTCGGTCTCTGGA 59 NA Mus musculus 50 Mcptl ENSMUSG00000071361 ENSMUST00000095798 1 1 1 148 14 56645864 56646290 TATACATGGGAGACTCTGGAG 59 56645736 56645754 CTCGCCCTTTATGACTCTG 59 NA Mus musculus 50 V1rh9 ENSMUSG00000071493 ENSMUST00000095967 3 1 1 77 13 22864614 22864633 AGAGATGCATTGTTTCAGGT 59 22864556 22864574 ATGATGGTGGTGCTTATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ganab ENSMUSG00000071650 ENSMUST00000096246,ENSMUST00000096247 1 2 2 80 19 8989689 8989709 CTTTAACTATCAGACTCGCCA 59 8989751 8989902 TCTGCTGAACTAGAGACCA 59 NA Mus musculus 50 C230004F18Rik ENSMUSG00000071753 ENSMUST00000096426 2 1 1 87 X 58387899 58387919 GAAATAGCTACAGTGCAAGAC 59 58387968 58428317 CATGTTCCTTCTCCCTCAG 59 NA InUTR Mus musculus 50 Als2cr11 ENSMUSG00000072295 ENSMUST00000097080,ENSMUST00000114295 2 2 2 81 1 59123047 59123066 CTCTTCAGAAAGCCATTGAG 58 59119366 59123004 ATAACATTTGTGACAGGGTC 57 NA Mus musculus 50 Myo18b ENSMUSG00000072720 ENSMUST00000086617 1 1 1 82 5 113268711 113269652 GAGATACAAAGAGGAAGGCA 59 113268648 113268666 TTTGATCCACTACAGCCAC 59 NA Mus musculus 50 ENSMUSG00000072730 ENSMUSG00000072730 ENSMUST00000100889 1 1 1 60 5 111823788 111823808 CTGTTTCTTATCAGCTAGGTC 57 111823827 111823848 CACTAAAGTCAAAGCAGATGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cylc1 ENSMUSG00000073001 ENSMUST00000101282 2 1 1 122 X 108314389 108316077 CATTCTGAGCATTCAAACTAGC 59 108316157 108316178 GGAACTGCAACTTCTAATTCTG 59 NA Mus musculus 50 OTTMUSG00000008822 ENSMUSG00000073765 ENSMUST00000097910 1 1 1 81 4 118627161 118627179 TTAGGAAGGTTTGGTCCAG 58 118627098 118627116 AGATTGCTGAGTTTCCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073800 ENSMUSG00000073800 ENSMUST00000097978 1 1 1 60 7 144426577 144428595 ACAAACACTATGTGCTGTC 57 144429979 144429997 TTTCCCACCTATGAATCCT 57 NA DesignNoJunction Mus musculus 50 Plekho2 ENSMUSG00000074239 ENSMUST00000098627 2 1 1 60 9 65399669 65399689 CTTTGGAAGTGAATGTACCTG 58 65399629 65399647 AGTTGAACTAGGTCCTCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 EG667283 ENSMUSG00000074311 ENSMUST00000098724 3 1 1 80 7 22880687 22882464 TGAGGCTCAGAAGATTTCC 58 22882508 22882526 AGGAGGAGAAGTACCATGG 59 NA Nonspecific Mus musculus 50 Vmn2r29 ENSMUSG00000074394 ENSMUST00000095611 2 1 1 60 7 7187201 7192696 AGAAAGATGCCATCCTCTG 59 7187159 7187178 TCCACAATCTTCTGAATCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 NM_011093.1 ENSMUSG00000074419 ENSMUST00000108620 2 1 1 60 7 3776585 3776605 ACCCAGTATAAATCATCAGGC 59 3776395 3776563 AGTAGTCTTCTGTCACCAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Gcnt7 ENSMUSG00000074569 ENSMUST00000099060 1 1 2 125 2 172279461 172279479 GTCCAAAGACATCCAAAGC 59 172278471 172278489 TCTGTTCTCCACTTTGTGG 59 NA DesignNoJunction Mus musculus 50 BC029722 ENSMUSG00000074649 ENSMUST00000099160 1 1 1 74 2 155644181 155644199 AACTGCAGAAGTACACTCC 59 155644125 155644143 AAAGACCAGGGCATATGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Eif2s2 ENSMUSG00000074656 ENSMUST00000099173 3 1 1 99 2 154710115 154710133 ACCTTGACATTATGCTTGG 57 154704288 154710053 TCATCTTCTAAAGCTTCGTC 57 NA Nonspecific Mus musculus 50 Sel1l2 ENSMUSG00000074764 ENSMUST00000099303 3 1 1 80 2 140071126 140071145 TTATCTAGCCGAGATGTACG 58 140069985 140071084 CAGACACCTTTGTAAAGCTC 58 NA Mus musculus 50 ENSMUSG00000074816 ENSMUSG00000074816 ENSMUST00000099399 3 1 1 61 2 127528673 127528691 TTCAAGTTGCAACTCACTG 58 127528716 127528734 GGCTGAGTGTTTCTTTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sp5 ENSMUSG00000075304 ENSMUST00000100043 3 1 1 109 2 70315167 70315186 AATAAGAAGCTCAAAGTCGC 58 70315258 70315276 CTGGGAAAGATGTCTTGGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Olfr288 ENSMUSG00000075427 ENSMUST00000088331 2 1 1 116 15 98019609 98019627 CATCTCTGTTTCTCGGGAC 59 98018168 98018186 AGGATGAACTCAGTCACAG 58 NA DesignNoJunction Mus musculus 50 mmu-mir-669c ENSMUSG00000076118 ENSMUST00000084675 1 1 1 92 2 10430924 10430942 CTCCATGTATGTGCATGTG 58 10430998 10431016 GCACTTGTGTTTACTTGTG 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 TRBC1 ENSMUSG00000076490 ENSMUST00000103291 2 1 1 108 6 41488510 41488529 CTTTCAGAGGAGGACAAGTG 59 41489119 41489236 GATAGGATGCTGAGGTAATCC 59 NA Mus musculus 50 IGHV3-8 ENSMUSG00000076674 ENSMUST00000103483 1 1 1 60 12 115560639 115560658 TCCAAGAACCAGTATTACCT 57 115560598 115560616 AATATGTGGCTGTGTCCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lenep ENSMUSG00000078173 ENSMUST00000057431 2 1 1 60 3 89206429 89206447 ATGTATCGAACCCTGAAGG 58 89206387 89206405 GTTCCTTGATACACCAGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_082706.1 ENSMUSG00000078451 ENSMUST00000105507 1 1 1 90 10 41214412 41218177 AAGAAGAGGGAACTGAAGG 58 41218231 41218249 GATCAAATGCGTTACCCAG 58 NA Mus musculus 50 NP_001078973.1 ENSMUSG00000078505 ENSMUST00000105747 1 1 1 99 4 144263715 144264439 GTAGCCTGGACATTTACCA 58 144260588 144260606 TGATGATGCTTAGGAAGCT 58 NA Mus musculus 50 Prnp ENSMUSG00000079037 ENSMUST00000091288 2 1 1 87 2 131737953 131737971 CTGAACCATTTCAACCGAG 58 131738021 131762167 ATGATGACTGATAGTCTGCT 57 NA InUTR Mus musculus 50 EG664859 ENSMUSG00000079052 ENSMUST00000110327 1 1 1 60 8 57991107 57991126 TCAGAGAAACCATCAAGTCC 59 57991149 57991167 AAGTCCTTTACAAAGGGCA 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 NP_001079003.1 ENSMUSG00000079521 ENSMUST00000114030 1 1 1 80 X 75374599 75374618 CTTGTGAAATATGCTGTGTC 57 75374660 75374915 TTACTCAGGACAGGTATCTG 57 NA Mus musculus 50 A2BI73_MOUSE ENSMUSG00000079704 ENSMUST00000089372,ENSMUST00000115573 2 2 2 93 X 8101035 8101053 AGGCATTGAAGTTCATGAC 58 8094655 8100504 TATTGTCACCGATGTCAGC 59 NA DesignNoJunction Mus musculus 50 Q9DAS3_MOUSE ENSMUSG00000079728 ENSMUST00000115764 3 1 1 80 17 6854933 6858036 GTAAAGGAGGCTATAGAAAGC 57 6854873 6854891 TAGGACATTAGTGGTCCAC 57 NA Nonspecific Mus musculus 50 NP_001098021.1 ENSMUSG00000080312 ENSMUST00000116660 1 1 1 179 17 19517190 19519477 TTTCAGAGATCCCTCAGTC 57 19530654 19530673 CTGCATTTGCATAATGTCTC 57 NA Mus musculus 50 Mgl1 ENSMUSG00000000318 ENSMUST00000000327,ENSMUST00000102571,ENSMUST00000100954 3 3 4 149 11 69983757 69983927 GAAAGGCTTTAAGAACTGGG 58 69984039 69984057 TTCATCTCACAGATCCAGC 59 NA Mus musculus 50 Vmn2r88 ENSMUSG00000000606 ENSMUST00000022438 1 1 3 87 14 52035231 52036384 GAACATCACCTCAGGTTCC 59 52036434 52036453 CAGTCTGCTGTTTCTTTCTG 59 NA Mus musculus 50 Loxl3 ENSMUSG00000000693 ENSMUST00000000707 2 1 2 80 6 82999947 82999967 CTAGGAAGAGCTGACTTTAGG 59 83000009 83000125 CATACTGTGGTAATGCCCA 59 NA Mus musculus 50 Aire ENSMUSG00000000731 ENSMUST00000019257,ENSMUST00000105396,ENSMUST00000105395 2 3 4 87 10 77502466 77502485 TAGAGATGAGCAGAAAGTGG 58 77500725 77502417 CTCGTTCTTCTGGTTAACCT 59 NA Mus musculus 50 Icam2 ENSMUSG00000001029 ENSMUST00000106810 2 1 4 186 11 106242243 106242638 CATGAAAGGGTCTGGTGAG 59 106242075 106242093 GAACTGTTTCCACTTCCCT 59 NA Mus musculus 50 Epn2 ENSMUSG00000001036 ENSMUST00000001063,ENSMUST00000116368 1 2 6 105 11 61348850 61348868 TCCTCTGAGTTAGAGCAGG 59 61348106 61348781 TTTCTGATGACTGCTCAGC 59 NA Mus musculus 50 Akt1 ENSMUSG00000001729 ENSMUST00000001780,ENSMUST00000109749 3 2 2 80 12 113893435 113894726 TGTATGAGAAGAAGCTGAGC 59 113893374 113893394 TGAACTCCTCATCGAAATACC 59 NA Mus musculus 50 Emd ENSMUSG00000001964 ENSMUST00000096424 1 1 3 93 X 71500366 71500803 ATTGTGGACTTGGATTCAG 57 71500859 71501090 CATTATAGTCCTTGCTCTGG 57 NA Mus musculus 50 Ap4e1 ENSMUSG00000001998 ENSMUST00000002063,ENSMUST00000110394,ENSMUST00000110392 2 3 4 80 2 126860935 126863529 AGACGATGAAAGGACAAGTG 59 126863569 126863590 GTGACATTGTGATTTAACTCGG 59 NA Mus musculus 50 Mll1 ENSMUSG00000002028 ENSMUST00000114689,ENSMUST00000098833 3 2 3 98 9 44642052 44642070 ATGACGATGACTACGAGAG 58 44641120 44641991 ACATCTCATCTTCTGTACCT 57 NA Mus musculus 50 Ikzf4 ENSMUSG00000002578 ENSMUST00000105233,ENSMUST00000002653,ENSMUST00000105232,ENSMUST00000065334 3 4 4 112 10 128073774 128073793 TACAAACAGCAAAGTACCCT 59 128072962 128073699 TCACGGATTTCATCACCTG 59 NA Mus musculus 50 Top3a ENSMUSG00000002814 ENSMUST00000002891,ENSMUST00000102668 3 2 3 152 11 60559321 60559339 CAAGACCAAGAAGAGTGGT 59 60556618 60557445 AACTTCAACCTGTACACAGG 59 NA Mus musculus 50 Kcnn1 ENSMUSG00000002908 ENSMUST00000110081,ENSMUST00000110080,ENSMUST00000110078,ENSMUST00000002987 2 4 4 82 8 73376601 73376619 CTGTGTTGTTGGTCTTCAG 58 73374625 73376555 CTGCTTATCGTGGTACCTC 59 NA Mus musculus 50 Irf3 ENSMUSG00000003184 ENSMUST00000107835,ENSMUST00000003284,ENSMUST00000107834 3 3 3 87 7 52257082 52257100 GCTACACTCTGTGGTTCTG 59 52257151 52257544 GTAGGAACAACCTTGACCA 59 NA Mus musculus 50 Pih1d1 ENSMUSG00000003423 ENSMUST00000107813,ENSMUST00000085375,ENSMUST00000107811 2 3 3 94 7 52414684 52415054 GACCTTCCTAAACTGGACG 59 52415111 52415130 TCCAGATGATACAGTTGCTG 59 NA Mus musculus 50 Bicd1 ENSMUSG00000003452 ENSMUST00000086829,ENSMUST00000111517,ENSMUST00000111513,ENSMUST00000003544 3 4 4 80 6 149465593 149467432 ATGTTTGCAACAAGATGCG 59 149467476 149467494 CTTCTCATCTTCTGCAGCT 59 NA Mus musculus 50 Rad23a ENSMUSG00000003813 ENSMUST00000003911,ENSMUST00000109761 3 2 2 88 8 87362369 87362389 CATCTCCAGAATCCATTTCTG 58 87362023 87362179 AGAGCCAGTCACTAATGTG 58 NA Mus musculus 50 Nfat5 ENSMUSG00000003847 ENSMUST00000075922,ENSMUST00000077440,ENSMUST00000109265 1 3 3 80 8 109863199 109863217 CAAAGCACCTCACTATGTG 58 109863260 109868697 CTGTCCAATGTTCCATTTCC 59 NA Mus musculus 50 Nkg7 ENSMUSG00000004612 ENSMUST00000070518 3 1 2 109 7 50693225 50693243 TTCTCCTGGTCCTTCTACC 59 50693445 50693463 AAGGTTTCATACTCAGCCC 59 NA DesignNoJunction Mus musculus 50 Apba3 ENSMUSG00000004931 ENSMUST00000057798,ENSMUST00000099453 1 2 2 80 10 80735691 80735799 CAGAGACAAGAGAAATCCAC 57 80735842 80735860 GGTATACTGGTTGTTCCTG 57 NA Mus musculus 50 Polr2a ENSMUSG00000005198 ENSMUST00000058470,ENSMUST00000071213 3 2 2 82 11 69550474 69550695 GAGATCTTCACGGTACTGG 59 69550410 69550429 GAACCATCAAAGGAGATGAC 58 NA Mus musculus 50 Pan2 ENSMUSG00000005682 ENSMUST00000105236 3 1 3 103 10 127751367 127751789 CTGAGGGTAGCATTCAGAC 59 127751855 127751874 TTGCAGTCTCCAGAAATCAG 59 NA Mus musculus 50 Khsrp ENSMUSG00000007670 ENSMUST00000007814,ENSMUST00000065744 3 2 2 90 17 57164495 57164743 ATACAAAGTACAGCAAGCCT 59 57164424 57164442 AGATCCGTATTCATTGCGG 59 NA Mus musculus 50 Ccdc109a ENSMUSG00000009647 ENSMUST00000009791 2 1 2 177 10 58919546 58920581 TAAACAAGACCTCCTAAGCC 59 58917889 58919406 AATTCGTACCTTCTCCAGG 58 NA Mus musculus 50 Rpl15 ENSMUSG00000012405 ENSMUST00000079419,ENSMUST00000100799,ENSMUST00000080281 2 3 4 152 14 19102918 19102936 TATGGAGGAAGAAGCAGTC 58 19102549 19102802 TGACATAGCCTTGCTTAGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Rpl15 ENSMUSG00000012405 ENSMUST00000079419,ENSMUST00000100799,ENSMUST00000080281 1 3 4 153 14 19102918 19102937 CTATGGAGGAAGAAGCAGTC 59 19102549 19102802 TGACATAGCCTTGCTTAGC 59 NA Nonspecific Mus musculus 50 Dguok ENSMUSG00000014554 ENSMUST00000014698,ENSMUST00000101241 1 2 3 80 6 83430933 83431356 TTAACAAGACTACCAAGCTC 57 83430872 83430890 CAGAGAAGTCTTCAGTGAC 57 NA Mus musculus 50 Lbp ENSMUSG00000016024 ENSMUST00000016168 3 1 2 87 2 158150342 158150360 CACAGATGGAGATCGAAGG 59 158150409 158151459 GCAAATACATTAGTGACCACG 59 NA Mus musculus 50 Nt5c3l ENSMUSG00000017176 ENSMUST00000107398,ENSMUST00000107399,ENSMUST00000092688,ENSMUST00000092689,ENSMUST00000107397 3 5 6 89 11 100292583 100294241 CAGTGAGGATGGATTCCTG 59 100292512 100292530 AAGTAGCTGGAGTTCTCAC 58 NA Mus musculus 50 Zc3h18 ENSMUSG00000017478 ENSMUST00000017622,ENSMUST00000093073 1 2 3 118 8 124923052 124925498 AGAGACACAACACTTGAGC 59 124925580 124925598 TGATACGGTTCTGCTTCTG 59 NA Mus musculus 50 Hnf4a ENSMUSG00000017950 ENSMUST00000109411,ENSMUST00000018094,ENSMUST00000051130 1 3 3 146 2 163378378 163383926 ATGAAGAAGGAAGCTGTCC 59 163384699 163384717 ATTGATCCCAGAGATGGGA 59 NA Mus musculus 50 Pmp22 ENSMUSG00000018217 ENSMUST00000108702,ENSMUST00000018361,ENSMUST00000108701,ENSMUST00000108700 2 4 4 61 11 62948002 62948020 GCTACTCCTCATCAGTGAG 58 62964643 62964661 GACAGACAGGATCATGGTG 59 NA DesignNoJunction Mus musculus 50 Myh11 ENSMUSG00000018830 ENSMUST00000090287,ENSMUST00000077248,ENSMUST00000115792 2 3 3 80 16 14239536 14239555 GATGAGATGTTCCAGGAGAC 59 14236544 14239493 TACCTTCAAGATGGCTAGC 58 NA Mus musculus 50 Lhx9 ENSMUSG00000019230 ENSMUST00000093486,ENSMUST00000019374,ENSMUST00000112030 2 3 5 94 1 140729339 140729357 TGCTATCAACCATAACCCA 58 140725272 140729281 CCAAGATTTGTTCTCCCTG 58 NA Mus musculus 50 Rwdd1 ENSMUSG00000019782 ENSMUST00000080041 3 1 2 178 10 33731897 33731915 CATTACTGTGACATCGGAG 57 33723633 33728808 GGAAATAAATCTGCAATGCC 57 NA Mus musculus 50 Atp2b1 ENSMUSG00000019943 ENSMUST00000020107 2 1 2 84 10 98479594 98479614 GCTCAGAACTTTCAATAGAGC 59 98479660 98481362 ATGGTTGAAATAAGCTGGC 58 NA Mus musculus 50 Fgf22 ENSMUSG00000020327 ENSMUST00000020577 2 1 1 63 10 79219388 79219406 TCTATGTGGCCATGAATCG 59 79219512 79219531 CTACAGTCCACAGAGTAGAC 58 NA DesignNoJunction Mus musculus 50 Hnrpab ENSMUSG00000020358 ENSMUST00000074669 1 1 3 84 11 51416145 51416164 TATCAGCAACAGCAGTATGG 59 51414966 51416098 TTGTACTACCCTGACCTCC 59 NA Mus musculus 50 OTTMUSG00000001265 ENSMUSG00000020486 ENSMUST00000107961 3 1 9 162 11 87392481 87392500 ATGATGACAGAATGACCCAC 59 87397901 87397919 TTACCCAGACCAGATTCTC 57 NA DesignNoJunction, InUTR Mus musculus 50 OTTMUSG00000001265 ENSMUSG00000020486 ENSMUST00000084575,ENSMUST00000107962,ENSMUST00000107960,ENSMUST00000018544,ENSMUST00000096206 1 5 9 80 11 87397104 87397428 TGATTCCTCTGAGGATGAC 58 87397472 87397490 CCTTTCTTCACAGACTTCC 57 NA Nonspecific Mus musculus 50 Nf1 ENSMUSG00000020716 ENSMUST00000071325,ENSMUST00000108251,ENSMUST00000108248,ENSMUST00000097941 1 4 4 80 11 79257642 79257660 TGCTCTGTATCCAATGCTG 59 79257699 79258112 CTTAGTAATACCTGTCCTTGAGAG 59 NA Mus musculus 50 Nt5c ENSMUSG00000020736 ENSMUST00000106530 1 1 2 82 11 115352080 115352182 AAAGACAACATTCAAGAGCG 59 115352017 115352035 AGGTGAACAAGATGTGCTC 59 NA Mus musculus 50 Ppp2r5e ENSMUSG00000021051 ENSMUST00000021447,ENSMUST00000101303 1 2 2 81 12 76569499 76569517 GTCACTCTTTCATGCACAG 58 76567657 76567791 CCTAATAACTGGTTCTGTAAGG 57 NA Mus musculus 50 Wdr37 ENSMUSG00000021147 ENSMUST00000054251,ENSMUST00000021572 2 2 2 80 13 8860378 8860399 ATACGAAGAACTAACAGCTCAG 59 8856160 8860338 CGGCAGTTTAGAATCTTGTC 58 NA Mus musculus 50 Trip11 ENSMUSG00000021188 ENSMUST00000021605 3 1 3 80 12 103128823 103131653 CAAGCTTTGACTGATGCTG 59 103127975 103127994 CTGATTGTCTTCAGCAAGAC 58 NA Mus musculus 50 Prpf4b ENSMUSG00000021413 ENSMUST00000021850,ENSMUST00000077853 3 2 2 85 13 34987318 34987847 CCTCTCAGTATGAATTTGCG 58 34987895 34987913 TGACTGTACGATCGTACAG 58 NA Mus musculus 50 Rgnef ENSMUSG00000021662 ENSMUST00000022166 2 1 2 144 13 98847262 98847645 CTTTATATGGACAGAAGACGGT 59 98847139 98847157 GATTGGAGGACATTGTCCT 58 NA Mus musculus 50 BC026439 ENSMUSG00000022366 ENSMUST00000110196,ENSMUST00000022995 3 2 2 83 15 57076574 57079006 CAGTAGAACTCAGGTCAACTC 59 57076511 57076530 TAGCAAGTGTTAGTGCAGAC 59 NA Mus musculus 50 Dnalc4 ENSMUSG00000022420 ENSMUST00000023055,ENSMUST00000069877 3 2 2 136 15 79595264 79595282 TGACTATAAACGGCTGCAG 59 79592940 79593942 TCATCTTTGCAGCACTCTC 59 NA Mus musculus 50 Trp63 ENSMUSG00000022510 ENSMUST00000115310,ENSMUST00000115306,ENSMUST00000040231 2 3 6 81 16 25886319 25886337 ATGCCTGGACTATTTCACG 59 25886382 25889108 CAGACTTGCCAAATCATCC 58 NA Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000114002,ENSMUST00000064797,ENSMUST00000116575,ENSMUST00000023678 3 4 16 80 16 91887699 91887718 AAGGCTACATCCATGAACTC 59 91887758 91889375 GTTTCTGAAAGATCTCTGTGAC 59 NA Mus musculus 50 Fmnl3 ENSMUSG00000023008 ENSMUST00000081224 2 1 4 86 15 99162474 99162494 AGGGAGTTTCTCAATGATGAG 59 99158588 99162429 AGTACTGTACATGACAGAACAC 59 NA Mus musculus 50 Grm2 ENSMUSG00000023192 ENSMUST00000098430,ENSMUST00000023959 1 2 2 99 9 106552746 106552764 CCTCTACAAGGACTTCGTG 59 106550496 106550514 AATACCATCTCCAAAGCGG 59 NA DesignNoJunction Mus musculus 50 Cul2 ENSMUSG00000024231 ENSMUST00000080089 2 1 3 83 18 3434100 3434852 ATTCAAGAGGTAATCAGCCA 58 3434895 3434916 GTCTATCAGAACTTCTATGCAC 58 NA Mus musculus 50 Eif4ebp3 ENSMUSG00000024483 ENSMUST00000006203 2 1 6 80 18 36773566 36773584 ATGTTCTGTCAGTTCCCAC 59 36773628 36774432 AAGTTCTGTCAGGTTCCTG 59 NA Mus musculus 50 D18Ertd653e ENSMUSG00000024544 ENSMUST00000063775,ENSMUST00000025426 3 2 2 140 18 68395386 68395405 AACCACTACAAAGTCTCCAC 59 68410269 68413671 ACACATGATCTCTGAAGCC 59 NA Mus musculus 50 Gpha2 ENSMUSG00000024784 ENSMUST00000113526,ENSMUST00000025698 1 2 2 105 19 6227106 6227124 ACAACATCACCTCTTCCTC 58 6227538 6227556 GTAAAGATCTCAAGCTCCC 57 NA DesignNoJunction Mus musculus 50 Htatip ENSMUSG00000024926 ENSMUST00000025865,ENSMUST00000113641,ENSMUST00000113640 2 3 4 81 19 5603977 5605380 TTGAGTTCAGCTATGAACTCTC 59 5603917 5603935 GATAGGAGGCCAAGATCTG 58 NA Mus musculus 50 Prdx5 ENSMUSG00000024953 ENSMUST00000099807,ENSMUST00000025904 3 2 2 97 19 6982542 6982560 GAAAGAAGGTGAACTTGGC 58 6982155 6982481 CAGGTGGGTCTTAGAACAG 59 NA Mus musculus 50 Gpr137 ENSMUSG00000024958 ENSMUST00000099782,ENSMUST00000099774,ENSMUST00000025909,ENSMUST00000099776 3 4 4 60 19 7013772 7013790 AGATGCCTTCGATTACGAC 59 7013610 7013629 TAGGTCATTCACCAGATCTG 58 NA DesignNoJunction Mus musculus 50 Dntt ENSMUSG00000025014 ENSMUST00000112200 1 1 2 80 19 41130319 41133560 TATGACAGGACTAAGAGGGT 58 41133603 41133621 TTCAATGTAGTCCAGTCCC 58 NA Mus musculus 50 Slk ENSMUSG00000025060 ENSMUST00000051691 2 1 2 83 19 47699908 47699926 CATCAAAGGAGAGCAGGAG 59 47699971 47702154 TCCACTTCATTCATAACCTCC 59 NA Mus musculus 50 Prkar1b ENSMUSG00000025855 ENSMUST00000110890,ENSMUST00000026973 1 2 2 150 5 139584604 139603554 AGAAGTTGGAGAAGGAGGA 59 139584472 139584490 TAGACTTCAGCACTCACAC 58 NA Mus musculus 50 Kdelc1 ENSMUSG00000026047 ENSMUST00000065767 1 1 2 94 1 44167640 44167661 CTGGAAACATTACATTCCAGTC 59 44166916 44167585 CTATCTTCTTGGCCTCTGC 59 NA Mus musculus 50 Ptp4a1 ENSMUSG00000026064 ENSMUST00000027232,ENSMUST00000076587 3 2 2 80 1 31001505 31001794 ATTCATGTTCTTGACTGGC 58 31001443 31001461 CTTCACAAGACTTAGCCAG 57 NA Nonspecific Mus musculus 50 Sema4c ENSMUSG00000026121 ENSMUST00000114992,ENSMUST00000114991,ENSMUST00000027295,ENSMUST00000114990,ENSMUST00000114995 1 5 5 80 1 36610613 36610632 CTTCAGCCATACAATTCCTC 58 36610404 36610570 GAGCATGTTGATGTAGGTG 58 NA Mus musculus 50 Prim2 ENSMUSG00000026134 ENSMUST00000027312 3 1 2 83 1 33685373 33687198 AGAGTCAGTTTATAAGGTCCC 58 33685310 33685328 TAAGCAAAGCCATCTTCCA 59 NA Mus musculus 50 Ptprc ENSMUSG00000026395 ENSMUST00000027645,ENSMUST00000112038,ENSMUST00000081416,ENSMUST00000112036 1 4 6 80 1 139985132 139985151 TATAACCGTGTGGAACTCTC 58 139980352 139985090 CTTGAAGCCATCAATGTAGC 59 NA Mus musculus 50 Klhl12 ENSMUSG00000026455 ENSMUST00000112232 1 1 3 139 1 136383722 136383742 CCAGCGGAATAATCTATTGTC 58 136384317 136385609 AGTGCGAATGTTATAAGCAG 58 NA Mus musculus 50 Rgs7 ENSMUSG00000026527 ENSMUST00000085853 1 1 5 84 1 177008373 177008391 ATGAAGAGCGACTCATACC 58 176996813 177008326 TTTCATGGCATCTCTTTCTC 57 NA Mus musculus 50 Odf2 ENSMUSG00000026790 ENSMUST00000113756,ENSMUST00000113757,ENSMUST00000113759,ENSMUST00000113755,ENSMUST00000046571,ENSMUST00000113766 1 6 13 80 2 29748609 29748627 GATGAGAACACTCCTGTCC 59 29748671 29748978 GCGCTTATGAGATTTCTGG 58 NA Mus musculus 50 Dnm1 ENSMUSG00000026825 ENSMUST00000113350,ENSMUST00000113352,ENSMUST00000078352,ENSMUST00000113365,ENSMUST00000002626,ENSMUST00000116534 3 6 9 80 2 32179181 32179199 GACTTCATAGGCTTTGCCA 59 32178702 32178951 AATCTCATCCTGGTTCCCT 59 NA Nonspecific Mus musculus 50 Egfl7 ENSMUSG00000026921 ENSMUST00000080087,ENSMUST00000102906,ENSMUST00000102907,ENSMUST00000100290 2 4 4 131 2 26447238 26447645 TGCTAGAACAGAAACTGCA 59 26447740 26447758 GTGAATCAATTCGGTCCAG 58 NA Mus musculus 50 BC003993 ENSMUSG00000027014 ENSMUST00000111824 2 1 5 102 2 77741946 77741964 GACTCAGAATCTGACAGCA 58 77719539 77741882 TTTCTGAAACTGAGGTAGAGC 59 NA Mus musculus 50 Zfp385b ENSMUSG00000027016 ENSMUST00000111830,ENSMUST00000111831,ENSMUST00000090766 3 3 5 81 2 77253833 77253852 TACTCTACTGCTCACTATGC 58 77252793 77253791 GTCTTGTGTTTAGATCCTGTG 58 NA Mus musculus 50 Eif3m ENSMUSG00000027170 ENSMUST00000028592,ENSMUST00000111109 2 2 3 88 2 104853416 104853434 GGTACACAGTGTACTGCAG 59 104853094 104853364 CTTTCTCACTTGATCCAGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Arhgap1 ENSMUSG00000027247 ENSMUST00000111329,ENSMUST00000111331,ENSMUST00000070873,ENSMUST00000090614,ENSMUST00000111330 2 5 5 123 2 91510714 91510875 CTTCCTGGTGCAGATATCTG 59 91510961 91510979 ATTGATAGCCTTGAGGGTG 59 NA Mus musculus 50 Ubox5 ENSMUSG00000027300 ENSMUST00000028761 1 1 1 67 2 130428320 130428339 TAAATCTTTGCCTCCCACAG 59 130426427 130426445 TTCGTAACCATCAGCTGAC 59 NA DesignNoJunction Mus musculus 50 5730494N06Rik ENSMUSG00000027341 ENSMUST00000110164 3 1 3 286 2 132071803 132071822 TTTCCCTTTCAGACTAGCTG 59 132066330 132066348 TATGATGAGGACAGGAACG 58 NA DesignNoJunction, InUTR Mus musculus 50 Gabpb1 ENSMUSG00000027361 ENSMUST00000110424,ENSMUST00000028839,ENSMUST00000103228,ENSMUST00000089741,ENSMUST00000103226 2 5 10 80 2 126472480 126475819 TCTTCAGAAACTCCAGTAGTG 59 126472420 126472440 GCTAACTACTTGCTGAATTGC 59 NA Mus musculus 50 Rpo1-2 ENSMUSG00000027395 ENSMUST00000103205 2 1 2 90 2 128948925 128948943 ATGGACAACTATCCGATCG 58 128948997 128949459 CCTTGTTGACAATCATGGC 59 NA Mus musculus 50 Phactr3 ENSMUSG00000027525 ENSMUST00000108917,ENSMUST00000108916,ENSMUST00000103066,ENSMUST00000029031,ENSMUST00000108915,ENSMUST00000108914,ENSMUST00000103065 2 7 7 84 2 178066339 178067539 CAAGAAAGCTTAACCAGAGAC 58 178067583 178067603 GCTACTTCCACATAATCACTG 58 NA Mus musculus 50 Sall4 ENSMUSG00000027547 ENSMUST00000075044,ENSMUST00000103074,ENSMUST00000029061,ENSMUST00000109167 3 4 5 128 2 168578051 168578069 GAAAGAACTTCTCGTCTGC 58 168575948 168577960 TCATGTAGTGTACCTTCAGG 58 NA Mus musculus 50 Rpn2 ENSMUSG00000027642 ENSMUST00000103128,ENSMUST00000116380 3 2 3 89 2 157115280 157115298 TCAAGTCCAACCTTGATCC 59 157115350 157116282 AAACAGATATCTCACAGCCT 58 NA Mus musculus 50 Nola1 ENSMUSG00000028010 ENSMUST00000029643,ENSMUST00000106366 2 2 2 147 3 129532403 129533524 AACGTGTCGTCTTGTTAGG 59 129532274 129532294 AATATCTCATCCACTTTCCCG 59 NA Mus musculus 50 Kcnq5 ENSMUSG00000028033 ENSMUST00000029667 2 1 2 81 1 21447697 21456473 CATCAAGCAGTCAGAAGCT 59 21447634 21447652 GCTTGTCTGCTCTTAATGC 59 NA Mus musculus 50 Spata1 ENSMUSG00000028188 ENSMUST00000029839,ENSMUST00000093951 2 2 2 142 3 146152875 146156647 TCTTCATCAGAGTTGGTGG 58 146151705 146151723 TGTAAGGTAAGCTGAGGAG 57 NA Mus musculus 50 Hsdl2 ENSMUSG00000028383 ENSMUST00000107529 2 1 3 179 4 59604959 59605038 GGAATATGAAGCTAGCGGG 59 59605180 59606117 CTGCTTCAATTTCTTCAGCA 59 NA Mus musculus 50 Nfx1 ENSMUSG00000028423 ENSMUST00000091614 3 1 3 90 4 40956229 40956247 ATTCTTGTCATAGCGAGGA 58 40956300 40959107 TTCTTAATTGTGAGCTCCTC 57 NA Mus musculus 50 4930417M19Rik ENSMUSG00000028457 ENSMUST00000107942,ENSMUST00000056010,ENSMUST00000102953 3 3 5 81 4 43304588 43315457 AGACAGAAGGAAGAAGAGGA 59 43315501 43317531 TGGAATTGTCCGGATACTC 58 NA Mus musculus 50 Tpm2 ENSMUSG00000028464 ENSMUST00000030184,ENSMUST00000107914 2 2 4 177 4 43532262 43532280 CAGACCGCAAATATGAGGA 59 43531326 43531882 TTGGTGGAATACTCCTCCT 59 NA Mus musculus 50 Rnf11 ENSMUSG00000028557 ENSMUST00000064167,ENSMUST00000030284 2 2 2 65 4 109129528 109129546 GTTTATGACCCTGGAAGAG 57 109127006 109127025 GTCCATCATACAGATCACAC 57 NA DesignNoJunction Mus musculus 50 2310009E04Rik ENSMUSG00000028573 ENSMUST00000107085 2 1 8 183 4 95363721 95363741 ATGATTGGACTGGAAGATCTC 59 95405599 95467256 TTTGCTGATCTAGTCCTCC 58 NA InUTR Mus musculus 50 Ndufs5 ENSMUSG00000028648 ENSMUST00000106206,ENSMUST00000030401 3 2 3 205 4 123393234 123393252 AACAGCCCTATAAGAACGC 59 123390110 123390131 GTATTTGCCCTCTTTCATTAGC 59 NA DesignNoJunction Mus musculus 50 Macf1 ENSMUSG00000028649 ENSMUST00000082108,ENSMUST00000084301,ENSMUST00000097897,ENSMUST00000106220,ENSMUST00000106224 2 5 12 151 4 123047158 123047176 CCAATCCTCTCACAGTCTG 59 123045270 123046071 AATTCTTTCAATTCCGGGC 58 NA Mus musculus 50 Pik3r3 ENSMUSG00000028698 ENSMUST00000030464 1 1 2 81 4 115958731 115958749 ATACCCAAGAACAACACAG 57 115958793 115959436 ATCATAATTCGCTCGATCTC 57 NA Mus musculus 50 Prkag2 ENSMUSG00000028944 ENSMUST00000114975,ENSMUST00000030784,ENSMUST00000076306,ENSMUST00000099290 2 4 4 197 5 24394987 24395324 AGAAGACTCAGAAAGTGGC 59 24384572 24386510 GTGAGCATTCCTACAAAGC 58 NA Mus musculus 50 Prkag2 ENSMUSG00000028944 ENSMUST00000099290 3 1 4 199 5 24394988 24395327 GAAAGAAGACTCAGAAAGTGG 58 24384573 24386511 TGAGCATTCCTACAAAGCT 58 NA Mus musculus 50 Mib2 ENSMUSG00000029060 ENSMUST00000077624 3 1 3 176 4 155033102 155033241 GATGGCAGAGTTTATCGGA 59 155032010 155032028 TTCACAGTGTCAAGGTCAC 59 NA Mus musculus 50 Prom1 ENSMUSG00000029086 ENSMUST00000074113,ENSMUST00000087441 2 2 4 93 5 44392522 44393033 ATACGACGATGTTGAGACTG 59 44392024 44392042 AACAGGATTGTGAACACCA 59 NA Mus musculus 50 Spata18 ENSMUSG00000029155 ENSMUST00000041422,ENSMUST00000113548,ENSMUST00000071077 1 3 3 85 5 74062436 74062454 ATACTGACTTTGAGACCGC 59 74062502 74063585 GATCACATCATTGACACTGC 59 NA Mus musculus 50 Lnx1 ENSMUSG00000029228 ENSMUST00000087161,ENSMUST00000039744 1 2 2 82 5 75006832 75016012 CTCATCTGATTCAGGCCAG 59 75006768 75006786 TTGAAAGATGTCTGGGCTG 59 NA Nonspecific Mus musculus 50 Aff1 ENSMUSG00000029313 ENSMUST00000081312 1 1 4 86 5 104270112 104270132 AACTGGATAAGTCGCACTG 59 104271255 104271273 TGAGTTCTCTGAGGAGGAC 59 NA Mus musculus 50 Nos1 ENSMUSG00000029361 ENSMUST00000111935 3 1 4 91 5 118350611 118358006 AGTTCACAGAGGAAGTAGC 58 118358060 118358079 AATGTTAATCTCCACCAGGG 59 NA Mus musculus 50 Cdkl2 ENSMUSG00000029403 ENSMUST00000069937,ENSMUST00000086978,ENSMUST00000113143,ENSMUST00000113140 3 4 4 83 5 92466381 92468274 AGTTACTAAAGCAACTGCG 58 92466316 92466334 CAAAGACTAGGTACCAACG 57 NA Mus musculus 50 Pus1 ENSMUSG00000029507 ENSMUST00000031481,ENSMUST00000112426,ENSMUST00000086643,ENSMUST00000031483,ENSMUST00000100906 2 5 5 87 5 111204615 111204633 GTATCCCTAAAGGTGTGGC 59 111204224 111204564 TCTTCAATCCCAGAATCCG 59 NA Mus musculus 50 Flt1 ENSMUSG00000029648 ENSMUST00000031653,ENSMUST00000110529 3 2 3 95 5 148466741 148466759 TCCTTTATCCTGGATCCCA 59 148457801 148466684 GCTAACCGTCTTATTTGTTCC 59 NA Mus musculus 50 Cald1 ENSMUSG00000029761 ENSMUST00000079391,ENSMUST00000115027,ENSMUST00000115026 2 3 6 113 6 34636067 34691801 GCAGAAAGAATTGCCTATCAG 59 34691875 34691894 CAAGGATTCTTCCTCTTGCT 59 NA Mus musculus 50 Osbpl3 ENSMUSG00000029822 ENSMUST00000114470,ENSMUST00000114469,ENSMUST00000071728,ENSMUST00000114468 2 4 4 60 6 50250952 50250972 TCAAGGTCTTTATTACCACCC 59 50249427 50250932 CCTCTAGAAGCCTTTGATCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Klf15 ENSMUSG00000030087 ENSMUST00000032174,ENSMUST00000113530 1 2 2 119 6 90417424 90417442 AGATGTACACCAAGAGCAG 58 90424121 90424139 TTGACAACTCATCTGAGCG 59 NA DesignNoJunction Mus musculus 50 C530028O21Rik ENSMUSG00000030329 ENSMUST00000032479 2 1 1 86 6 124949711 124949729 AAACACCTGCTACCTTGAG 59 124950692 124950710 TGGATATGGTGATCGTGAC 58 NA DesignNoJunction Mus musculus 50 Aldoa ENSMUSG00000030695 ENSMUST00000087566 3 1 3 80 7 133941280 133941495 TAGGAAAGGAAAGCACTGC 59 133941218 133941236 CAGACAGCTCCTTCTTCTG 59 NA DesignRelaxed Mus musculus 50 Sult1a1 ENSMUSG00000030711 ENSMUST00000106373,ENSMUST00000106371,ENSMUST00000106372,ENSMUST00000075935 2 4 4 81 7 133817686 133817794 GATGGGAAAGTGTCCTATGG 59 133817624 133817643 GATAGAGAACAGGGTGAGTG 59 NA Mus musculus 50 Acsm3 ENSMUSG00000030935 ENSMUST00000098081,ENSMUST00000106527,ENSMUST00000106528,ENSMUST00000063770,ENSMUST00000106529,ENSMUST00000106526 1 6 6 80 7 126924514 126924533 CCCTCATAGAACATCCTTCC 59 126924575 126927376 AAGCCTTTACTACCTCTCCT 59 NA Mus musculus 50 Rs1 ENSMUSG00000031293 ENSMUST00000033650 1 1 2 80 X 157219828 157228711 TAGACTGTATTCCAGAATGCC 59 157228753 157228771 AGCAAGTGATCTGATCTGG 59 NA Mus musculus 50 Gpr64 ENSMUSG00000031298 ENSMUST00000112403,ENSMUST00000112401,ENSMUST00000078682,ENSMUST00000112398 3 4 10 178 X 156896795 156899282 CTACTCCAATGATGCTGCT 59 156906835 156906856 CATGTTGAAACACTATCTCACC 59 NA Mus musculus 50 Rps6ka3 ENSMUSG00000031309 ENSMUST00000112493,ENSMUST00000033671,ENSMUST00000112492,ENSMUST00000112496 3 4 7 169 X 155723247 155749406 CACAAACTGAAGAAGGCAG 58 155755879 155755897 AAGCTGTCTAGCATCAGAG 58 NA Mus musculus 50 Arhgap6 ENSMUSG00000031355 ENSMUST00000033721,ENSMUST00000112131,ENSMUST00000112127,ENSMUST00000112126 3 4 6 82 X 165739695 165739715 AGAGGAGCCTTTCAATATCTG 59 165739758 165740257 CATAAGAGCCTGTCATTCCT 59 NA Mus musculus 50 Ctps2 ENSMUSG00000031360 ENSMUST00000101093,ENSMUST00000112302 1 2 7 103 X 159413117 159413135 AATTGACATGCCTGAACAC 58 159413201 159449002 ATGGATGACTCAGTATGGAG 58 NA Mus musculus 50 Cnot7 ENSMUSG00000031601 ENSMUST00000110472,ENSMUST00000034012,ENSMUST00000110471 2 3 4 80 8 41592996 41595380 TATGTTGCTATGGACACCG 59 41592934 41592954 GTACTGATAGTCAGCATTGCT 59 NA Mus musculus 50 Tcf12 ENSMUSG00000032228 ENSMUST00000034755,ENSMUST00000113549 1 2 3 80 9 71770504 71770525 ACACCATACTACTCATTCTCTG 59 71764851 71770464 CGCTTGTAAAGGATCTAGGG 59 NA Mus musculus 50 Tspan3 ENSMUSG00000032324 ENSMUST00000034876,ENSMUST00000098723 1 2 2 100 9 55993731 55994335 TATGTGCAGAGACAGTTGC 59 55993649 55993667 CTAAGAGGGACACTCTGGT 59 NA Mus musculus 50 Nptn ENSMUSG00000032336 ENSMUST00000034887,ENSMUST00000074429,ENSMUST00000114121 1 3 3 90 9 58488539 58488557 TGTACTGCAAGTCAGTTGG 59 58488607 58491355 CCAGAGCTATTAGAAATCTCCTC 59 NA Nonspecific Mus musculus 50 Pdcd6ip ENSMUSG00000032504 ENSMUST00000111853 1 1 3 88 9 113565146 113598844 TGCTAGTGCTACCTATCCA 59 113564167 113564186 TATTGTACTGGCCATATGCG 59 NA Mus musculus 50 Styk1 ENSMUSG00000032899 ENSMUST00000049150,ENSMUST00000111992 3 2 2 96 6 131252370 131254732 GGAGATATTTGGTCCTTTGG 57 131251692 131251711 GATATTGTAGGATGCTGGTG 57 NA Mus musculus 50 Map2k4 ENSMUSG00000033352 ENSMUST00000046963,ENSMUST00000108694 1 2 2 81 11 65509844 65509862 AAGAATAGACCCAAGTGCA 58 65507064 65509800 CAACTCGTACAATGTGATCC 58 NA Nonspecific Mus musculus 50 Ctdspl2 ENSMUSG00000033411 ENSMUST00000036647,ENSMUST00000110581,ENSMUST00000110578,ENSMUST00000110574,ENSMUST00000110572 3 5 7 139 2 121832717 121833467 GCCTATCAGCTTTCTAATGG 58 121836314 121836333 AATCTGTCTCTGATGTGAGG 58 NA Mus musculus 50 St18 ENSMUSG00000033740 ENSMUST00000115503,ENSMUST00000115501,ENSMUST00000043578,ENSMUST00000115499,ENSMUST00000115497 2 5 5 80 1 6835863 6838995 ACCCACAGAAGCTTATCTG 58 6839034 6839057 GATAGTCATTAGTTCCTCAGAGAC 59 NA Mus musculus 50 Rpap2 ENSMUSG00000033773 ENSMUST00000112650,ENSMUST00000112651,ENSMUST00000112654,ENSMUST00000065422,ENSMUST00000112653,ENSMUST00000112655 2 6 6 110 5 108032548 108032566 ATGTTCATCACACCAGCTC 59 108032639 108032854 TTTCTGTTTCGGGATAACCC 59 NA Mus musculus 50 Dysf ENSMUSG00000033788 ENSMUST00000113821,ENSMUST00000089595 3 2 5 107 6 84037860 84046480 AAATAGAAGAGGAGCCTGC 59 84047738 84047758 CATAGAGGTTCACATAGCAGG 59 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111696,ENSMUST00000111695,ENSMUST00000111694,ENSMUST00000111678,ENSMUST00000111677,ENSMUST00000111676,ENSMUST00000111687,ENSMUST00000111685,ENSMUST00000111684,ENSMUST00000111672 3 10 23 72 2 84443386 84443404 GAAGAGTTGGATGTGTTGG 58 84443048 84443350 GCTAAATCTTCTGCATGGG 58 NA DesignRelaxed Mus musculus 50 Vav1 ENSMUSG00000034116 ENSMUST00000005889 1 1 4 80 17 57451315 57454679 CAGCATTAAGTATAACGTGGAG 58 57454720 57454738 GCCTTCTTCTCTGTGATCC 59 NA Mus musculus 50 Rnps1 ENSMUSG00000034681 ENSMUST00000115371,ENSMUST00000088512 1 2 3 101 17 24558789 24559107 TGACCAAGGATCATATCATGG 59 24559170 24559188 CATAGCCTTTGGAGAGGTG 59 NA Nonspecific Mus musculus 50 Txndc13 ENSMUSG00000034723 ENSMUST00000038228 2 1 3 105 2 134426694 134426713 TATTTCACAGTGACCCTTGG 59 134425794 134426626 AAATCACCACCAGGATCAG 59 NA Mus musculus 50 C8a ENSMUSG00000035031 ENSMUST00000048947,ENSMUST00000064873,ENSMUST00000106808 3 3 3 81 4 104499319 104499339 AGTGCCATTACATATCAGTCC 59 104494801 104499276 GGTAGATAGGCTGCATCTC 58 NA Mus musculus 50 Mid1 ENSMUSG00000035299 ENSMUST00000112104,ENSMUST00000112107,ENSMUST00000112108,ENSMUST00000036753,ENSMUST00000112105,ENSMUST00000078947 2 6 7 158 X 166404083 166414865 ATGTTGAAGTCAATGCATCC 58 166419841 166419859 TACAGTTTGCAATCTGCTG 58 NA Mus musculus 50 D4Wsu132e ENSMUSG00000035649 ENSMUST00000107824,ENSMUST00000084635,ENSMUST00000067521 1 3 4 90 4 44775304 44775322 ATCCTTCTCAACTTGGTGG 59 44906434 44907797 CTATCTTGGCCTCGATGTC 59 NA Mus musculus 50 Lrfn5 ENSMUSG00000035653 ENSMUST00000047317 1 1 2 104 12 62944960 62944979 CCTGATTCTGTTACAGAGGG 59 62952013 62953149 GGAAAGCTTCTGTGTTTCC 58 NA Mus musculus 50 Fbxw2 ENSMUSG00000035949 ENSMUST00000113080,ENSMUST00000028220,ENSMUST00000091020,ENSMUST00000113075 1 4 8 80 2 34678130 34678149 AGACCTCTTCGTTAATTGGA 58 34668521 34678087 CATCTGACCCTGTACAGAG 58 NA Mus musculus 50 4632404H22Rik ENSMUSG00000036022 ENSMUST00000114838,ENSMUST00000071023,ENSMUST00000114841,ENSMUST00000114837 2 4 4 81 X 50613093 50613380 TTTGGAAAGCAATGCTTGTC 59 50613031 50613050 TTGGATTGAGAACAGGACTC 59 NA Mus musculus 50 Gng12 ENSMUSG00000036402 ENSMUST00000043148,ENSMUST00000114228,ENSMUST00000114227,ENSMUST00000114226,ENSMUST00000114225,ENSMUST00000114224,ENSMUST00000114222 3 7 7 125 6 66965821 66967462 CCATCGAAAGAATAAAGGTCTC 58 66967547 66967566 TCTTCTTATCCTTGAACGGG 59 NA Mus musculus 50 Megf11 ENSMUSG00000036466 ENSMUST00000068967,ENSMUST00000093829 2 2 2 135 9 64545167 64545618 TGTGAACGTGTTAGACTCC 59 64547905 64547923 TCTGTCCATTCCACAAGTG 59 NA Mus musculus 50 Arhgap21 ENSMUSG00000036591 ENSMUST00000114594,ENSMUST00000045258 3 2 3 82 2 20803469 20804836 TACAGCACTGGCATATTCTC 59 20803406 20803426 GAGGTTCAGGTATATTACGGG 59 NA Mus musculus 50 Etl4 ENSMUSG00000036617 ENSMUST00000114627,ENSMUST00000114620,ENSMUST00000114609,ENSMUST00000066509,ENSMUST00000114608 1 5 12 160 2 20728979 20728997 CATATCTCCAGCTTCACGT 59 20729649 20730352 TAGCACTTCCATTAGCCTG 59 NA Mus musculus 50 Bcorl1 ENSMUSG00000036959 ENSMUST00000114972,ENSMUST00000037596 3 2 2 80 X 45746466 45753747 CTTTCTCAGTGATCACCTCTC 59 45753788 45753807 GAACTGCTGTAGAAATCCCA 59 NA Mus musculus 50 Zscan21 ENSMUSG00000037017 ENSMUST00000110961,ENSMUST00000110960,ENSMUST00000080732,ENSMUST00000062350,ENSMUST00000110959 3 5 5 77 5 138567850 138567868 ACTCAGGATCCAAGAAAGC 59 138574300 138574319 AGAACTTCTGTGCTCATCTG 59 NA DesignNoJunction Mus musculus 50 Zscan21 ENSMUSG00000037017 ENSMUST00000110961,ENSMUST00000110960,ENSMUST00000080732,ENSMUST00000062350,ENSMUST00000110959 3 5 5 77 5 138567850 138567868 ACTCAGGATCCAAGAAAGC 59 138574300 138574319 AGAACTTCTGTGCTCATCTG 59 NA DesignNoJunction Mus musculus 50 Tacc3 ENSMUSG00000037313 ENSMUST00000079534,ENSMUST00000074849 2 2 4 133 5 34009386 34009723 ACTTCCTCGTTTAAGGAGTC 59 34010614 34010632 TCCTCCTCTGTATCCTGTG 59 NA Mus musculus 50 Gm1964 ENSMUSG00000037336 ENSMUST00000045921,ENSMUST00000095877 2 2 3 109 12 4872112 4872544 CTCAGTTTGGAGTTTGCAG 58 4872021 4872040 ATAAGGATCATACAGGTGGG 58 NA Mus musculus 50 Rps6kc1 ENSMUSG00000037581 ENSMUST00000056178,ENSMUST00000061611,ENSMUST00000097440 3 3 4 82 1 192695822 192709222 GGTACTGAAGGATTCTCCA 57 192695758 192695776 ATTCCATCATCTACCTCGG 58 NA Mus musculus 50 Tnfrsf23 ENSMUSG00000037613 ENSMUST00000097931 2 1 2 168 7 150867376 150867395 AATGATGTCTGTTGCAAGAC 58 150856912 150865860 CACTGTCACCTTTATCACAG 58 NA Mus musculus 50 Darc ENSMUSG00000037872 ENSMUST00000038227 1 1 1 60 1 175262342 175262361 GTTAGTGTCTTGTGGATCTG 57 175262301 175262320 CAAATATGAGAACCATCCCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Rcor1 ENSMUSG00000037896 ENSMUST00000116388,ENSMUST00000084968 3 2 2 85 12 112341944 112341962 GTCTGCTAATGCTACTGCT 59 112342010 112346795 TGATGTTCTGAATCTGTCGT 59 NA Mus musculus 50 Rapgefl1 ENSMUSG00000038020 ENSMUST00000107480,ENSMUST00000037640,ENSMUST00000107479 2 3 3 80 11 98701588 98701608 GACATTGTTCTTACCCATTCC 58 98701648 98703524 CCTTGACTGAACAAAGTACTG 58 NA Mus musculus 50 Tmco3 ENSMUSG00000038497 ENSMUST00000045229 3 1 2 82 8 13318909 13319768 TGGTCATCATGAAGTTTGTG 58 13319811 13319831 TACGATCCACTTGATGTACTG 59 NA Mus musculus 50 Cbfa2t2 ENSMUSG00000038533 ENSMUST00000109725,ENSMUST00000045270,ENSMUST00000109720,ENSMUST00000099178,ENSMUST00000109724,ENSMUST00000109718 2 6 7 239 2 154336319 154341556 ATTCCATTTCTCAAGGCCA 59 154343468 154343487 TTCAGGAGGAACTGTATCTC 58 NA DesignRelaxed Mus musculus 50 Ralgps1 ENSMUSG00000038831 ENSMUST00000113165,ENSMUST00000091039,ENSMUST00000113162 2 3 6 89 2 33014490 33014508 GTCCAGATACATCTGTGGC 59 33013439 33014437 GACACATCAGATTGTTGCC 59 NA Mus musculus 50 Agbl3 ENSMUSG00000038836 ENSMUST00000115017,ENSMUST00000115016,ENSMUST00000090350,ENSMUST00000115014 2 4 4 106 6 34732185 34732204 CTCAGATAGAAGCATCAGTG 57 34733624 34735202 CAATAGAATCAGCTGCCAG 58 NA Mus musculus 50 Stau1 ENSMUSG00000039536 ENSMUST00000109235,ENSMUST00000109238,ENSMUST00000109236,ENSMUST00000088055,ENSMUST00000049412 2 5 5 80 2 166776821 166776839 TAAAGAAACCAGGAGACGG 58 166776589 166776778 CGTCCTTGTTACTAGTTCCA 59 NA Mus musculus 50 4833442J19Rik ENSMUSG00000039958 ENSMUST00000047531,ENSMUST00000111551 3 2 4 60 6 149095774 149095792 GGAGCATCAAAGATCTTGG 58 149098868 149098887 TTAGTGTAATCGCCATTCCT 58 NA DesignNoJunction Mus musculus 50 Ccdc67 ENSMUSG00000039977 ENSMUST00000115592,ENSMUST00000115593 1 2 3 89 9 15379781 15392440 AATTAAGCAAGGCTGTGGA 59 15379710 15379728 TTCGGAGTCTTTCGTTCTC 59 NA Mus musculus 50 Cacna2d1 ENSMUSG00000040118 ENSMUST00000039370 3 1 3 114 5 15825103 15825123 TATCAAGAGATTGACACCACG 59 15825970 15828368 TACACCAATAGGCTTTGGC 59 NA Mus musculus 50 Wbscr27 ENSMUSG00000040557 ENSMUST00000047196,ENSMUST00000111221,ENSMUST00000111219,ENSMUST00000068617,ENSMUST00000111218 1 5 5 69 5 135408706 135409349 GAGTATGACCAGGATGTGG 59 135409382 135409400 CTCGACTGAGACAATCCAC 59 NA DesignRelaxed Mus musculus 50 Col16a1 ENSMUSG00000040690 ENSMUST00000097867,ENSMUST00000044565,ENSMUST00000106002,ENSMUST00000106001 1 4 5 82 4 129730757 129731401 CGGTTTCATTTGACCTTCAG 59 129731446 129731464 CGGTAAGATCTCACAGCAG 59 NA Mus musculus 50 Ints8 ENSMUSG00000040738 ENSMUST00000108318 2 1 3 110 4 11136607 11140865 ATATACAGACCAAGTGGCA 57 11136400 11136419 TAGTAGGAATCCATAGCGTC 58 NA Mus musculus 50 Sh3kbp1 ENSMUSG00000040990 ENSMUST00000073094,ENSMUST00000112456,ENSMUST00000080394,ENSMUST00000112451,ENSMUST00000112449 1 5 8 85 X 156278543 156303276 GACAATTGGGAAGAAGTTACC 58 156303323 156316062 AATCCTTGGTCTTTGTCCT 58 NA Mus musculus 50 Spem1 ENSMUSG00000041165 ENSMUST00000045771 1 1 1 68 11 69635336 69635354 AATCCGCATCCTCTTACAC 59 69635115 69635133 TTCCCAAGTGAAGTACTGG 58 NA DesignNoJunction Mus musculus 50 Dzip1 ENSMUSG00000042156 ENSMUST00000004055 3 1 2 90 14 119280292 119280311 AAGGAAGTGGGAATAAAGCA 59 119278724 119280240 GCATCTGTGCACTTTAACTC 59 NA Mus musculus 50 Chchd7 ENSMUSG00000042198 ENSMUST00000108386,ENSMUST00000041122 3 2 2 81 4 3869902 3869923 ATAACTATGACAGGGAAAGGTG 59 3869964 3870551 TGGATCATGACAGAATTCCA 58 NA Mus musculus 50 Pbrm1 ENSMUSG00000042323 ENSMUST00000112095,ENSMUST00000112094,ENSMUST00000052239,ENSMUST00000112098,ENSMUST00000112089,ENSMUST00000112088,ENSMUST00000112080,ENSMUST00000052467,ENSMUST00000022471,ENSMUST00000022474,ENSMUST00000090214 2 11 11 60 14 31874881 31874899 ATGAAACTCATGTTCCGCA 59 31874923 31877941 CATTGTATACCTGGGAGCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Acn9 ENSMUSG00000042505 ENSMUST00000040826 1 1 1 60 6 6988947 6988967 CTCAATGACTTTCGTGATGAG 59 6988989 6989007 TAGTAGCCTCTTGCATCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ubap2l ENSMUSG00000042520 ENSMUST00000064639 3 1 5 91 3 89832295 89835231 TATGATACATCCAGGTGCA 57 89830576 89830594 CGGTAAAGATCTTGGTCTC 57 NA Mus musculus 50 Rgs8 ENSMUSG00000042671 ENSMUST00000041776,ENSMUST00000111812,ENSMUST00000111810 1 3 3 83 1 155538124 155538142 CAACTGCAAAGCTAGTCAC 59 155538189 155539867 AATCGATATTCACCTCCCG 58 NA Nonspecific Mus musculus 50 Gjc2 ENSMUSG00000043448 ENSMUST00000075445,ENSMUST00000108793,ENSMUST00000069642,ENSMUST00000108790,ENSMUST00000108792 3 5 5 66 11 58990950 58990968 TGACAACGTCTGCTATGAC 59 58990902 58990920 CACTATCTGGAAGACCCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Trp53bp1 ENSMUSG00000043909 ENSMUST00000065020,ENSMUST00000110648,ENSMUST00000064996 3 3 6 83 2 121033858 121034101 ACTGGAACCAGAGAAACAG 59 121033793 121033811 GAAGGACTTGTCATCTGGT 58 NA Mus musculus 50 Fmn1 ENSMUSG00000044042 ENSMUST00000099576,ENSMUST00000081349 2 2 6 86 2 113436539 113443333 ACTATGATCAGGAAGCTGG 58 113443383 113443401 CAAACTTGACTTGAGAGGC 58 NA Mus musculus 50 4933404M19Rik ENSMUSG00000044122 ENSMUST00000078099,ENSMUST00000108317,ENSMUST00000100774 2 3 4 90 11 78017692 78018354 GAATCTAGGTGTAGAAGCCAC 59 78018405 78018424 CTTCCAGATCGTCATCTGTC 59 NA Mus musculus 50 Cyb5d1 ENSMUSG00000044795 ENSMUST00000108660 1 1 2 203 11 69208301 69208319 TTGCATGAGATACCGTACC 59 69207289 69208134 ATTTCCATGTGTAGCTGCA 59 NA DesignRelaxed Mus musculus 50 Ankrd45 ENSMUSG00000044835 ENSMUST00000111608,ENSMUST00000052245 1 2 2 82 1 163090879 163093402 TCAAGGAAGACAAGAGCAC 59 163093448 163093466 ACTAATGGAAGCCTCTGGA 59 NA Nonspecific Mus musculus 50 Ust ENSMUSG00000047712 ENSMUST00000061601 1 1 1 83 10 8017908 8017926 CTTTGGAGATTGGAGAGGG 59 7967974 8017861 TCATTGATGTCCAGGTAGC 59 NA Mus musculus 50 Olfr686 ENSMUSG00000048425 ENSMUST00000050157 2 1 1 60 7 112351949 112351970 GTTAAGACCAAACAGATCAGAG 58 112351910 112351929 GTTCAATCTTCTTGGAACCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 1700012H17Rik ENSMUSG00000049119 ENSMUST00000054857,ENSMUST00000108380 3 2 2 103 4 5656737 5656755 GTGCTTTAAGCAAGGAAGG 59 5725433 5725451 TCTCCTTCAGGTCTTTGTG 58 NA DesignNoJunction, InUTR Mus musculus 50 Ugt3a2 ENSMUSG00000049152 ENSMUST00000058565 2 1 2 110 15 9291606 9291625 TCTGACCTTCTACTGAAAGC 59 9291698 9291717 GTTTGTCCAGTAACCTCCC 59 NA Mus musculus 50 Arhgap23 ENSMUSG00000049807 ENSMUST00000107602,ENSMUST00000107601 1 2 3 80 11 97336712 97337366 CTCAGAGAAGAACAAGATGGA 59 97337407 97337426 ATGTTGTCTTCAGATGTCCT 58 NA Nonspecific Mus musculus 50 AI314180 ENSMUSG00000050812 ENSMUST00000102889,ENSMUST00000098054,ENSMUST00000107560,ENSMUST00000041849 3 4 6 81 4 58834330 58834916 AGAATCCAGCTGTTTAGCTC 59 58834268 58834288 CCACATTTCTGGAAGTTTGTC 59 NA Mus musculus 50 Plcb1 ENSMUSG00000051177 ENSMUST00000110116,ENSMUST00000070724 1 2 3 86 2 134639337 134639357 GACTCCACTATTGTTACTCCA 58 134639405 134813868 CTCCGTCTCCTTATTCTGG 58 NA Mus musculus 50 Mafg ENSMUSG00000051510 ENSMUST00000058162,ENSMUST00000106182,ENSMUST00000106181,ENSMUST00000106180 3 4 4 136 11 120491137 120491156 CAATAAAGGAAACAAGGCCT 58 120490939 120490957 TGATCTCTTCCTTGGAGAG 57 NA DesignNoJunction Mus musculus 50 1110012J17Rik ENSMUSG00000052105 ENSMUST00000086693,ENSMUST00000112716,ENSMUST00000097291,ENSMUST00000036760 1 4 4 154 17 66717791 66727201 AACCTAGAGATGGAGGAGG 59 66717655 66717673 AAGATGTTCTGCTTCAGGG 59 NA Mus musculus 50 Mpp3 ENSMUSG00000052373 ENSMUST00000107168,ENSMUST00000100400,ENSMUST00000062801 3 3 4 86 11 101862033 101863346 TCTTCACTTGATGAACAGCA 59 101861966 101861984 GAGCACAGTGTCTATCAGG 59 NA Mus musculus 50 4930565N07Rik ENSMUSG00000052477 ENSMUST00000064341 3 1 2 95 1 85251146 85256283 CTTCTTCCTAAATGCATCCA 57 85250740 85250758 TCACAAGAACTACTTCCCT 57 NA Nonspecific Mus musculus 50 Prkg1 ENSMUSG00000052920 ENSMUST00000065067 2 1 2 181 19 31660204 31839047 GGTCGAAGGATCTCATAAAGG 59 31376876 31660061 TTCAACCTTCCCATCTTCC 59 NA Mus musculus 50 Brsk2 ENSMUSG00000053046 ENSMUST00000018971 3 1 4 123 7 149184440 149184461 CAGTCACATTCACTTTACTCTC 58 149184619 149188389 GGGATAATTCCTGACAGGT 58 NA Mus musculus 50 Camk2d ENSMUSG00000053819 ENSMUST00000106402,ENSMUST00000106404,ENSMUST00000106397,ENSMUST00000106396,ENSMUST00000106401 3 5 9 99 3 126511159 126513566 GGAAACAAGGAGTCAACTG 58 126537515 126537533 CAATCAGTTGCTCAGTGAC 58 NA Mus musculus 50 1600014C10Rik ENSMUSG00000054676 ENSMUST00000067854 3 1 1 165 7 38979783 38979802 CTCAGATCTTAATGGAGCTG 57 38979931 38979949 ACATAGGTCGTTAGCATGG 59 NA DesignNoJunction Mus musculus 50 Actr3b ENSMUSG00000056367 ENSMUST00000088244 2 1 2 81 5 25304307 25315609 ATTATCCCGTCATGTATCGC 59 25315653 25315671 CATCGACTCCTCTCAACAC 59 NA Mus musculus 50 Anks1b ENSMUSG00000058589 ENSMUST00000099366,ENSMUST00000078569,ENSMUST00000092221,ENSMUST00000099364 2 4 4 81 10 90143586 90143604 TTACACCAAAGCCTTTCTC 57 90330795 90357846 AACCTGAAATAGCTCAAGC 57 NA Mus musculus 50 Anks1b ENSMUSG00000058589 ENSMUST00000099366,ENSMUST00000078569,ENSMUST00000092221,ENSMUST00000099364 3 4 4 82 10 90143585 90143604 ATTACACCAAAGCCTTTCTC 58 90330795 90357846 AACCTGAAATAGCTCAAGC 57 NA Mus musculus 50 Bcas3 ENSMUSG00000059439 ENSMUST00000108062,ENSMUST00000108061,ENSMUST00000092821 1 3 12 147 11 85615442 85627507 GGATCTGGAACAGACACAG 59 85635574 85635592 CTTTGTTACTGTTGGGCTG 58 NA Mus musculus 50 Nr1h2 ENSMUSG00000060601 ENSMUST00000107912,ENSMUST00000073488 1 2 4 84 7 51807933 51807952 CCCACTATTAAGGAAGAGGG 58 51807607 51807888 CTAAGATGACCACGATGTAGG 59 NA Mus musculus 50 Apbh ENSMUSG00000062556 ENSMUST00000080635 1 1 1 78 7 32076478 32076496 GATAGGACGTTGACGAAGG 59 32075658 32075676 ATCAACATAACGGACTGGA 58 NA DesignNoJunction Mus musculus 50 Apbh ENSMUSG00000062556 ENSMUST00000080635 3 1 1 88 7 32076487 32076506 GATATGTGTCGATAGGACGT 58 32075658 32075676 ATCAACATAACGGACTGGA 58 NA DesignNoJunction Mus musculus 50 Slc24a3 ENSMUSG00000063873 ENSMUST00000110007,ENSMUST00000081121 3 2 2 80 2 145439356 145439375 GTGGTTTATGGTGACATTCG 59 145439417 145442345 ATGATGGTAACCATCCACAC 59 NA Mus musculus 50 2610305D13Rik ENSMUSG00000066000 ENSMUST00000105720,ENSMUST00000037565 3 2 2 80 4 146992575 146992593 CTCCTCACCAAGAATCTGG 59 146989503 146992532 AGGTTAATAGACACTGTGCA 58 NA Nonspecific Mus musculus 50 Fgfr1op ENSMUSG00000069135 ENSMUST00000097419 2 1 2 80 17 8365803 8365822 ATCTATCCGATGGACATCCT 59 8365864 8368393 ACCTTGGTATCTTACTTGGG 58 NA Mus musculus 50 Tia1 ENSMUSG00000071337 ENSMUST00000113713 3 1 4 111 6 86363887 86366303 TTATGGATGTAAGGACAGCAG 59 86366376 86366394 TTACCCATTATCTTCCGCC 59 NA Mus musculus 50 D14Ertd449e ENSMUSG00000072676 ENSMUST00000100811 2 1 2 60 14 26885103 26885122 CAGAGCATCCCTTATCAGAG 59 26885058 26885081 TAGTGGTCCACCAAATAGTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 IGHV7-3 ENSMUSG00000076653 ENSMUST00000103462 2 1 1 60 12 115150305 115150324 CCAGAGATAATTCCCAAAGC 58 115150264 115150282 CTGTCCTCAGTTCTCAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Eif5a ENSMUSG00000078812 ENSMUST00000071026,ENSMUST00000070996,ENSMUST00000043419,ENSMUST00000108612,ENSMUST00000108611,ENSMUST00000108610,ENSMUST00000108613,ENSMUST00000108609,ENSMUST00000108608,ENSMUST00000108607 1 10 10 161 11 69731420 69731438 TCAAACGGAATGACTTCCA 59 69730994 69731107 GCACTGTGATCAGGATCTC 59 NA Mus musculus 50 Zfx ENSMUSG00000079509 ENSMUST00000088102,ENSMUST00000113927,ENSMUST00000113926 3 3 4 81 X 91327628 91343630 TGATCTCTTTGGATGATGCT 58 91327566 91327584 GGGTCAATTTCTGTTTCGT 58 NA Mus musculus 50 9030025P20Rik ENSMUSG00000079709 ENSMUST00000097395 3 1 2 80 17 15124621 15124639 GCTGCAGTTAACAAGTGTC 59 15125057 15125870 TGCCAGTATTTCATCAAACG 58 NA Nonspecific Mus musculus 50 Mfsd4 ENSMUSG00000059149 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-218-2 ENSMUSG00000065583 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Tcf7 ENSMUSG00000000782 ENSMUST00000072425,ENSMUST00000086844,ENSMUST00000109071 1 3 3 83 11 52075071 52075089 AGCTTTCTCCACTCTACGA 59 52074115 52075024 TGTGAACTCCTTGCTTCTG 59 NA Mus musculus 50 Nsun5 ENSMUSG00000000916 ENSMUST00000000940 2 1 1 156 5 135845927 135845945 TGTATTCCAGCAACTTCCA 58 135846179 135847124 TCATACACTAGCACCTTGG 58 NA Mus musculus 50 Cyp51 ENSMUSG00000001467 ENSMUST00000001507 3 1 1 81 5 4087866 4091855 CTTACGACCAGTTGAAGGA 58 4087803 4087821 ATGGTCATTATTGGAGGCC 59 NA Mus musculus 50 2810405J04Rik ENSMUSG00000002017 ENSMUST00000112507,ENSMUST00000002070 3 2 2 80 17 75938447 75938752 GACAGAGCTAAGAGTCAGAC 59 75938386 75938404 GACCTTACCTTTAGGCGAC 59 NA Mus musculus 50 Armc6 ENSMUSG00000002343 ENSMUST00000019679 1 1 1 111 8 72748879 72748897 ATGATGATATCCGAGTGCC 58 72747576 72748804 TTGTCAGAGAATGCTCTGG 59 NA Mus musculus 50 Paf1 ENSMUSG00000003437 ENSMUST00000003529 3 1 1 80 7 29180087 29180105 TACTGCAATAGCCTTCCTG 59 29180147 29180449 GTACTGAACAAACCTGTTCTG 59 NA Mus musculus 50 Crhr2 ENSMUSG00000003476 ENSMUST00000114374,ENSMUST00000003568,ENSMUST00000095897,ENSMUST00000095898 2 4 4 87 6 55043006 55043024 CTTCTTTGTCAATCCTGGC 58 55042540 55042955 AAAGAAACCCTGGAAGGAC 59 NA Mus musculus 50 Angptl2 ENSMUSG00000004105 ENSMUST00000004208 1 1 1 80 2 33099456 33101613 TGATGTCTACACAGGAAACTG 59 33101655 33101673 CCATTGAGGTTGGAGTGAG 59 NA Mus musculus 50 Cacna1b ENSMUSG00000004113 ENSMUST00000102939,ENSMUST00000070864 3 2 7 96 2 24504065 24504419 TTGAACTACTTCAGAGATGCC 59 24494727 24504007 TGTTCGTTTCCGCTATCTC 59 NA Mus musculus 50 Slc1a2 ENSMUSG00000005089 ENSMUST00000080210,ENSMUST00000111206,ENSMUST00000111204,ENSMUST00000111213,ENSMUST00000111212,ENSMUST00000005220,ENSMUST00000111211 1 7 7 80 2 102578073 102579852 CAGTTTAATCACAGGGTTGTC 59 102579891 102579912 GACATGTAATACACCATAGCTC 58 NA Mus musculus 50 Agxt2 ENSMUSG00000005269 ENSMUST00000110542,ENSMUST00000022858 1 2 2 80 15 10323491 10323509 AACGTTTGCTTCACTTCAG 58 10323553 10328778 CTTCAATCACCTCAAGCAC 58 NA Mus musculus 50 Txn2 ENSMUSG00000005354 ENSMUST00000005487,ENSMUST00000109747 3 2 4 122 15 77758125 77758143 TTGTTGTGGACTTTCATGC 58 77754996 77755014 TGTGATCGTCAATGTCCAC 59 NA DesignNoJunction Mus musculus 50 Pafah1b3 ENSMUSG00000005447 ENSMUST00000005583 3 1 1 253 7 26082903 26082921 AATGATTTCCTCCTCGGAC 59 26081452 26082118 CAGATCTCACATTGGTGCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Rhox6 ENSMUSG00000006200 ENSMUST00000006362 1 1 1 169 X 35180888 35180906 ATGTTCTGAATAGGCTGGC 59 35181627 35182809 AAACCAATTCTGCACATCAC 59 NA Mus musculus 50 2510048L02Rik ENSMUSG00000006241 ENSMUST00000006403 3 1 1 81 9 21738150 21738171 GGATGAGATCTCAGAGAATCTC 59 21738212 21738576 CATCTTGGTAAGAACCTTGC 58 NA Mus musculus 50 Tek ENSMUSG00000006386 ENSMUST00000073939,ENSMUST00000102798,ENSMUST00000071168 2 3 3 80 4 94504086 94516321 CTTAGTGACATTCTCCCTCC 59 94516363 94516382 TGTCCAAGAAACCATAGCTG 59 NA Mus musculus 50 Tcf23 ENSMUSG00000006642 ENSMUST00000006818 1 1 1 161 5 31272560 31272578 TTTCCAAGTTGGATGTGCT 59 31275867 31275885 CTGCATAGAGACGAGATCG 59 NA DesignNoJunction Mus musculus 50 Syngr3 ENSMUSG00000007021 ENSMUST00000007236 3 1 1 102 17 24823468 24823486 GCTTCTTCTCCATCCTCAG 59 24823306 24823324 GTACCTAGCTGATCTGTGG 58 NA DesignNoJunction Mus musculus 50 Adam21 ENSMUSG00000008438 ENSMUST00000008582 3 1 1 60 12 82659941 82659960 GGAGGTAGTATTGACAGTGG 59 82659900 82659920 ACAGGACAGTGATAATGACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hyal1 ENSMUSG00000010051 ENSMUST00000112387,ENSMUST00000010195 1 2 3 147 9 107481294 107481441 GTACCAAGGAATCATGCCA 59 107481552 107481570 TCAGGATAACTTGGATGGC 59 NA Mus musculus 50 Faf1 ENSMUSG00000010517 ENSMUST00000102724 3 1 1 80 4 109467389 109467408 ATGACCTTACAAGCATACCT 58 109467450 109502420 CAAGACACATTGAGTCATCG 58 NA Mus musculus 50 Tex22 ENSMUSG00000012211 ENSMUST00000012355,ENSMUST00000109729 1 2 2 164 12 114313540 114313558 CTTGCTCAAGAGCAAAGAC 59 114326729 114326747 ATCGATGCTGATGTTCCAG 59 NA DesignNoJunction Mus musculus 50 Ndufa2 ENSMUSG00000014294 ENSMUST00000014438 1 1 1 147 18 36903929 36904079 TGTGAGGGATTTCATCGTG 59 36902278 36902296 ATTGTTCAGAGACACCGTC 59 NA DesignNoJunction Mus musculus 50 Glis2 ENSMUSG00000014303 ENSMUST00000014447 2 1 1 82 16 4611600 4611618 AACAGGATGCTCGATACTG 59 4611663 4611766 AATGAGCATCTTGTACCTGG 59 NA Mus musculus 50 Bik ENSMUSG00000016758 ENSMUST00000016902 2 1 1 117 15 83373583 83374017 GCTATACACAGACTCGCTG 59 83374098 83374116 GAGTCAAGACTCTCCAGGA 59 NA Mus musculus 50 Mpp2 ENSMUSG00000017314 ENSMUST00000017458,ENSMUST00000100398 1 2 2 138 11 101924610 101924628 CAAGGAAGTGAATGGACAG 58 101923685 101924509 TTTAACAAATACCTGTCGGG 57 NA Mus musculus 50 Shroom1 ENSMUSG00000018387 ENSMUST00000109013,ENSMUST00000018531 2 2 2 181 11 53279751 53279890 CCAAGAAAGTGGAACTAGC 58 53280035 53280053 TAGATCAGTCATGAACCGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 6330403K07Rik ENSMUSG00000018451 ENSMUST00000018595 1 1 1 60 11 70846601 70846620 CCTCTCCATCTTCATCTACG 59 70846560 70846578 ATAGGTGAAGATGCAGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnab3 ENSMUSG00000018470 ENSMUST00000018614 2 1 1 81 11 69144320 69144563 AAATCATGGAGGCCTACTC 58 69144608 69144626 TGAAAGAAGTGGTTCTCCG 59 NA Mus musculus 50 Hbs1l ENSMUSG00000019977 ENSMUST00000020153,ENSMUST00000092674 3 2 2 81 10 21024435 21027394 GTGAAATTGACCAAGCTCG 59 21027439 21027457 AGTATGTCATCAGGCACAG 59 NA Nonspecific Mus musculus 50 Apc2 ENSMUSG00000020135 ENSMUST00000020349 3 1 1 128 10 79764698 79764716 TTGAGACAGAGACTTCTGG 58 79764966 79765070 CAGTCTGAAGAGCTTTCAG 57 NA Nonspecific Mus musculus 50 Rab1 ENSMUSG00000020149 ENSMUST00000020358,ENSMUST00000109602,ENSMUST00000074741 1 3 4 80 11 20124492 20124660 AACAGCAAAGGAATTTGCAG 59 20124702 20124721 GACTGTTCTACATTCGTTGC 59 NA Nonspecific Mus musculus 50 9530003J23Rik ENSMUSG00000020177 ENSMUST00000020392 3 1 1 81 10 116672713 116674685 ATATCCTGCAAAGCTTTGC 58 116672650 116672668 TTCCTTGTGGATCCTTCAC 59 NA Mus musculus 50 Gabrg2 ENSMUSG00000020436 ENSMUST00000070735,ENSMUST00000070725,ENSMUST00000109292,ENSMUST00000109290 1 4 4 80 11 41781161 41782305 CTCCAGTTATGGATATCCTCG 59 41781101 41781119 CATGATCTTGTGTCACCCA 59 NA Mus musculus 50 Snx13 ENSMUSG00000020590 ENSMUST00000048519 2 1 1 80 12 35797113 35797132 GATGACCTTTCAAGTGTGAC 58 35797174 35804454 ATGATCATTACAAACGCCAG 58 NA Mus musculus 50 Ddx52 ENSMUSG00000020677 ENSMUST00000049257 2 1 1 80 11 83756932 83758046 AGATGACTTCAGAAGTTCCTG 59 83758086 83758106 CTTGAAGCTTTGCTTCTACAG 59 NA Mus musculus 50 Ankrd40 ENSMUSG00000020864 ENSMUST00000107818,ENSMUST00000051221,ENSMUST00000021227 2 3 3 101 11 94196213 94199664 ATATGCAAGAGCTGGTACTC 59 94199728 94199746 CTTGGTAGGTGAGTTCCTG 59 NA Mus musculus 50 Polr2h ENSMUSG00000021018 ENSMUST00000021405 2 1 1 147 16 20718973 20719075 GGACTTAGGTGACAAGTTCC 59 20720619 20720637 GATCCTGTACACTTTCCCA 58 NA DesignRelaxed Mus musculus 50 Papola ENSMUSG00000021111 ENSMUST00000101063,ENSMUST00000093264,ENSMUST00000109901 3 3 3 80 12 107038951 107043145 TGAAAGCAAGAATCTCCCA 58 107043187 107043207 ACTCCTAGTCTGTAAGATCCA 59 NA Nonspecific Mus musculus 50 1200014M14Rik ENSMUSG00000021671 ENSMUST00000099295 1 1 1 80 13 97161562 97161580 GATGAGGACAAGTGTTCAC 58 97161624 97163193 TTCATACTCCTCCTGAAGG 57 NA Mus musculus 50 Psmb5 ENSMUSG00000022193 ENSMUST00000022803 3 1 1 81 14 55235399 55235417 ATCAGTACAAAGGCATGGG 59 55233303 55235354 TCTACGTAGTAGAGGCCAG 59 NA Nonspecific Mus musculus 50 Bcl2l2 ENSMUSG00000022194 ENSMUST00000022806,ENSMUST00000111476 3 2 2 88 14 55503507 55503526 GTGGCATTCTTTGTCTTTGG 59 55503577 55503595 ATCCAATCCTGCACTTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc22a17 ENSMUSG00000022199 ENSMUST00000078122,ENSMUST00000050772,ENSMUST00000111469 2 3 3 80 14 55526930 55527106 CTTCACCAACTTTATTGCCC 59 55526869 55526887 AAGTAGAAGTCTGATGGGC 58 NA Mus musculus 50 Ccdc80 ENSMUSG00000022665 ENSMUST00000099498,ENSMUST00000061050 1 2 2 80 16 45116426 45116446 GAGGAAGGAGTATGGAATGAC 59 45116486 45118224 TCGTAGTATTGCTTGACTCTC 59 NA Mus musculus 50 Prkdc ENSMUSG00000022672 ENSMUST00000023352 3 1 1 80 16 15783340 15786006 GGATGGAACTTGCTAAACTC 58 15786049 15786067 TTGTTCCTAACTCACTGCT 58 NA Mus musculus 50 Nit2 ENSMUSG00000022751 ENSMUST00000023432 1 1 1 80 16 57164427 57166224 TAGTTTCTCTGCCTGAGTG 58 57164365 57164383 ACTCTCCAGGAATCTTCTC 57 NA Mus musculus 50 Gsk3b ENSMUSG00000022812 ENSMUST00000023507,ENSMUST00000114750 3 2 2 80 16 38144530 38170758 GCGATTTAAGAACCGAGAG 58 38170801 38170820 GAGTAGAAGAAATACCGCAG 57 NA Mus musculus 50 Cyp2ab1 ENSMUSG00000022818 ENSMUST00000023513 1 1 1 110 16 20314347 20314365 TTGGCCATCATTTCCTCTC 59 20313959 20314273 GAAACATGTCATACAGCCG 58 NA InUTR Mus musculus 50 Runx1 ENSMUSG00000022952 ENSMUST00000023673,ENSMUST00000046015,ENSMUST00000113956,ENSMUST00000113957 2 4 4 73 16 92689243 92689261 GAGATTCAACGACCTCAGG 59 92669025 92669043 TAAAGACGGTGATGGTCAG 58 NA DesignNoJunction Mus musculus 50 Epb4.2 ENSMUSG00000023216 ENSMUST00000102490,ENSMUST00000023987 1 2 2 80 2 120855749 120855767 GAACGGCTTTATCTACCTG 57 120854876 120855706 ATGACGTCTTTCTCAAACTG 58 NA Mus musculus 50 Ube2j2 ENSMUSG00000023286 ENSMUST00000103175,ENSMUST00000024056,ENSMUST00000105583,ENSMUST00000105581,ENSMUST00000105582 1 5 5 108 4 155325608 155329347 GACTCCTTATGAAGGTGGC 59 155329417 155329437 GCACTTAAATCTTCCATTGGG 59 NA Nonspecific Mus musculus 50 Park2 ENSMUSG00000023826 ENSMUST00000066658 3 1 1 109 17 11828280 11828298 ATGCTCAACTTGGCTACTC 59 12031526 12047607 CTGGTACCTAGTGTACTGC 58 NA Mus musculus 50 Tnfrsf21 ENSMUSG00000023915 ENSMUST00000024708 1 1 1 80 17 43177075 43177093 CTGAAGAAGTCCCTGACTC 58 43177134 43201933 CTTCAAGATGTCAATACCATGG 59 NA Mus musculus 50 Ptk7 ENSMUSG00000023972 ENSMUST00000044442 2 1 1 84 17 46716371 46716527 CTGATCTCAGAGGACTCGA 59 46716305 46716323 ACAATGTCCCGTCATACAC 59 NA Mus musculus 50 Sfrs7 ENSMUSG00000024097 ENSMUST00000063417,ENSMUST00000112421,ENSMUST00000063403 1 3 3 83 17 80603703 80603721 ATCTAGATCCCATTCCCGA 59 80603558 80603656 GATGCTGATCTTGACCTCC 59 NA Mus musculus 50 Prss21 ENSMUSG00000024116 ENSMUST00000024928 1 1 1 84 17 24006599 24009345 AGAAGATGAGAGTCTGCCA 59 24009390 24009411 GTACATATGGTTACACATGCTG 59 NA Mus musculus 50 Esco1 ENSMUSG00000024293 ENSMUST00000097670,ENSMUST00000025142,ENSMUST00000115865,ENSMUST00000115864,ENSMUST00000115863 2 5 5 146 18 10585976 10585997 CGTCTATCAACAGAAAGAACAG 59 10582175 10584254 GTCCTGCATCTATGACCAG 59 NA Mus musculus 50 Eif4ebp3 ENSMUSG00000024483 ENSMUST00000115692,ENSMUST00000006205 3 2 6 80 18 36753908 36753926 GATACACGCCTTTGATGGA 59 36753969 36754467 TTATATTTGCACCTTGTGCC 58 NA Mus musculus 50 Yipf5 ENSMUSG00000024487 ENSMUST00000025364 3 1 1 197 18 40370542 40371710 CCCTCTGTTAGAAGAGTTGG 59 40367485 40367503 CTGATCCCGTATACGTAGC 59 NA Mus musculus 50 Gnaq ENSMUSG00000024639 ENSMUST00000025541 2 1 1 87 19 16409587 16452651 AGTCAGACAATGAGAACCG 59 16452702 16452720 ATCACAGAGGAGTTCTGGA 59 NA Mus musculus 50 Doc2g ENSMUSG00000024871 ENSMUST00000025806 2 1 1 144 19 4004421 4004520 GAAGACCCTGAGACTATGTG 59 4004627 4004645 CTTCCGCTTCTCTAGACAG 59 NA Mus musculus 50 Kcnk4 ENSMUSG00000024957 ENSMUST00000113431 1 1 2 149 19 7007322 7007340 GCTTTACTTGGTATCTGGG 57 7007014 7007209 TGCTTGATGAAATCCTCCA 58 NA DesignNoJunction Mus musculus 50 Ablim1 ENSMUSG00000025085 ENSMUST00000111529,ENSMUST00000099294,ENSMUST00000111559,ENSMUST00000111528,ENSMUST00000111526,ENSMUST00000111550,ENSMUST00000111558,ENSMUST00000111555,ENSMUST00000079360,ENSMUST00000111546,ENSMUST00000111541,ENSMUST00000036802,ENSMUST00000111538,ENSMUST0 2 14 15 81 19 57142624 57142645 TTACCTATGAGCCTTTCTACAC 59 57138275 57142583 GACAAAGTCCTTGGAGACTC 59 NA Mus musculus 50 Chuk ENSMUSG00000025199 ENSMUST00000026217,ENSMUST00000112015 2 2 2 80 19 44157077 44157095 GGAGACTTGATGGAGTCTC 58 44153465 44156444 GTACAAGTGATCAGGAGGTC 59 NA Mus musculus 50 Pigq ENSMUSG00000025728 ENSMUST00000097368,ENSMUST00000026823 2 2 2 84 17 26067973 26068414 TTGACCAGCTCTTCATTGG 59 26067907 26067928 GTGAATACCAGGTAGTACAGAG 59 NA Mus musculus 50 Wdr24 ENSMUSG00000025737 ENSMUST00000026833 2 1 1 100 17 25964007 25964026 ATTATCTACTGTAGCCCTGG 57 25964088 25964188 AGATTGAAGCTGTTCATGAG 57 NA Mus musculus 50 Obfc2a ENSMUSG00000026107 ENSMUST00000027279 2 1 1 86 1 51529851 51529869 GAGGACAGCAGAATAGAGG 58 51528241 51529176 TCTGATCACCATTTCCCAC 59 NA Mus musculus 50 Cops7b ENSMUSG00000026240 ENSMUST00000027446 2 1 1 80 1 88488931 88493335 GGATTACATAGCCAACAAGGA 59 88493377 88493395 CTCACGATGGTAAGATGCT 59 NA Mus musculus 50 Nr5a2 ENSMUSG00000026398 ENSMUST00000027649 3 1 1 90 1 138787320 138787339 AGCTCTTGATTCTCGATCAC 59 138778978 138787267 GAGTAGTCCACGTGTTCTC 59 NA Mus musculus 50 Lhx4 ENSMUSG00000026468 ENSMUST00000027740 1 1 1 89 1 157557436 157571928 TTTCTTCAAACGCTTTGGC 59 157557365 157557383 TAGACAAAGTCCTGAGCCT 59 NA Mus musculus 50 Traf5 ENSMUSG00000026637 ENSMUST00000085573 2 1 1 111 1 193882879 193882897 CATAGTGGTGACCAACCTG 59 193881084 193881862 GTGTTCATTCACCCTAGCT 59 NA Mus musculus 50 Ak1 ENSMUSG00000026817 ENSMUST00000113278,ENSMUST00000113277,ENSMUST00000068271 2 3 3 147 2 32486705 32488824 AACAGAAGATTGGACAGCC 59 32488934 32488953 TTGTAATAAGTCTCCAGCCG 59 NA Mus musculus 50 Dapl1 ENSMUSG00000026989 ENSMUST00000028369 1 1 1 61 2 59334624 59334642 AAATGTCGCCAAGATACAG 57 59334667 59342777 TATGGTTGAGCTTGTCCAG 59 NA DesignRelaxed Mus musculus 50 Dnajc10 ENSMUSG00000027006 ENSMUST00000028392 3 1 1 80 2 80159460 80159479 CTACTACCGTTACGATTTCG 57 80161443 80164826 ACAGCAGCATCAAATTCTC 58 NA Mus musculus 50 Pax6 ENSMUSG00000027168 ENSMUST00000090397,ENSMUST00000037848,ENSMUST00000111087,ENSMUST00000111086,ENSMUST00000111085,ENSMUST00000111084,ENSMUST00000111083,ENSMUST00000111082,ENSMUST00000090391,ENSMUST00000111078 2 10 13 82 2 105535600 105536431 GACCACTTCAACAGGACTC 59 105536476 105536495 AGTACTGAGACATGTCAGGT 59 NA Mus musculus 50 Snrpb ENSMUSG00000027404 ENSMUST00000103199 2 1 1 60 2 130002782 130002801 CAAGCACATGAACTTGATCC 59 130001168 130002760 GTTCTTTGGCTTGATCTTCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Cpxm1 ENSMUSG00000027408 ENSMUST00000028897 2 1 1 81 2 130221423 130221441 ATTCAAGGTCCAGTTCAGC 59 130220797 130221379 GGCAGGAAATACTATGTCCA 59 NA Mus musculus 50 Dtd1 ENSMUSG00000027430 ENSMUST00000028917 2 1 1 139 2 144443150 144461498 AGAGCTTATCAGAGATGGC 58 144572637 144572655 GTTTCTCCAGCTTTGACAG 58 NA Mus musculus 50 Nkx2-2 ENSMUSG00000027434 ENSMUST00000109969,ENSMUST00000067075 2 2 3 76 2 147010028 147010046 GACACAGGTCAAGATCTGG 59 147009970 147009988 TCACCTCCATACCTTTCTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Gucy1b3 ENSMUSG00000028005 ENSMUST00000029635 2 1 1 82 3 81838349 81838671 ACATACAGGTGTCTCATGTC 59 81838286 81838304 TTGCCCTTCATAGACACTG 59 NA Mus musculus 50 2610029I01Rik ENSMUSG00000028251 ENSMUST00000029915 1 1 1 80 4 21686569 21686588 GGTGTTCTCTTGTTTAGCTG 58 21685614 21686526 TGTTGAGCACTGTTAAAGC 58 NA Mus musculus 50 Wdr40a ENSMUSG00000028436 ENSMUST00000030145 2 1 1 81 4 41249696 41249714 GAGGAGACAACCCTAACAG 58 41248414 41249651 TCCTTGTGTCCATCATCAC 59 NA Mus musculus 50 Hint2 ENSMUSG00000028470 ENSMUST00000030192 3 1 1 80 4 43667434 43667452 AGGACACTTACTCCTTGTG 58 43667271 43667391 CCATCATTAACCACAAGTCG 58 NA Mus musculus 50 Atpaf1 ENSMUSG00000028710 ENSMUST00000030478 3 1 1 80 4 115468040 115468058 CAGTCTACGCAGTTATTCC 57 115469402 115470583 GTGCACAAAGAAATGTTGG 57 NA Nonspecific Mus musculus 50 Atad3a ENSMUSG00000029036 ENSMUST00000030903,ENSMUST00000105594 3 2 2 138 4 155127738 155128001 GAGTCTATCAGGACAGCTG 58 155125644 155125664 CAGAAGTAGCATTCTTTGCAG 59 NA Mus musculus 50 Krtcap3 ENSMUSG00000029149 ENSMUST00000054829,ENSMUST00000075611,ENSMUST00000114570 3 3 3 110 5 31554377 31554395 GTTGCATGGTACTGTTCTG 58 31554469 31554575 ACTGAAACGCTCAGTAGTC 59 NA Mus musculus 50 Commd8 ENSMUSG00000029213 ENSMUST00000013693,ENSMUST00000101142 1 2 2 82 5 72552299 72553975 GATTGGCAGTTAAAGCTCG 59 72552235 72552253 TTCACATCCAGATGAAGGT 58 NA Mus musculus 50 Srd5a3 ENSMUSG00000029233 ENSMUST00000113508 2 1 2 105 5 76578862 76578881 TCAGTGTCTTCTCTAATGCA 58 76578950 76578969 TATCATCCATGGGACTTGG 58 NA Mus musculus 50 Alb ENSMUSG00000029368 ENSMUST00000031314 1 1 1 80 5 90901156 90901493 GTGTGGAAGACTATCTGTCTG 59 90901535 90901553 TGGTAACATGCTCACTCAC 59 NA Mus musculus 50 Rsrc2 ENSMUSG00000029422 ENSMUST00000050827,ENSMUST00000057795,ENSMUST00000111515 3 3 3 92 5 124189563 124189581 AAGGATCAGAACTCGTTCC 58 124186679 124189510 TTCTTTCTATCTCGACTTCGAC 59 NA Mus musculus 50 Pxn ENSMUSG00000029528 ENSMUST00000067268,ENSMUST00000086523,ENSMUST00000112060 1 3 3 80 5 116002218 116002237 TACTGTGAGAAGGACTACCA 59 116002280 116002784 TGTCACCACTTTATCCAGG 58 NA Mus musculus 50 Pxn ENSMUSG00000029528 ENSMUST00000067268,ENSMUST00000086523,ENSMUST00000112060 3 3 3 80 5 116002217 116002236 CTACTGTGAGAAGGACTACC 58 116002279 116002783 GTCACCACTTTATCCAGGA 58 NA Mus musculus 50 Sdsl ENSMUSG00000029596 ENSMUST00000031594,ENSMUST00000052258 2 2 2 236 5 120913066 120913084 CTGGCTCCTTTAAGATTCG 57 120910692 120911991 CTTCATCCCAGACTTTCCC 59 NA DesignRelaxed Mus musculus 50 Lrch4 ENSMUSG00000029720 ENSMUST00000031734 1 1 1 93 5 138078529 138078779 TCAGGAAATGAGTCCACAG 58 138078836 138078854 CTTCCCTAGGTTGTCTAGG 58 NA Nonspecific Mus musculus 50 Herc3 ENSMUSG00000029804 ENSMUST00000031823,ENSMUST00000041401,ENSMUST00000114286 3 3 3 80 6 58812976 58812994 AGTATCGTGTCGTTAAGCA 58 58813036 58818648 CAGGAGAAGAATTCTCATACG 57 NA Mus musculus 50 Zc3hav1 ENSMUSG00000029826 ENSMUST00000114900,ENSMUST00000039710,ENSMUST00000114898,ENSMUST00000031850 2 4 4 82 6 38281810 38281829 CCTAGGATGGATGATCATGG 59 38279257 38281765 TTCTTGTTGCAGTTGACCT 59 NA Mus musculus 50 Rerg ENSMUSG00000030222 ENSMUST00000032347 3 1 1 108 6 137015566 137113463 CAAGTCAGCGATTGTAGTG 58 137006364 137006383 AACAACTTCATCGTCTATGG 57 NA Mus musculus 50 Ccdc91 ENSMUSG00000030301 ENSMUST00000032441,ENSMUST00000111615,ENSMUST00000111614 2 3 3 190 6 147482699 147484115 CTCCAAGGCTCAGATTCAG 59 147484266 147484287 CAGAAGCTTTGAGTTTAGTCTC 59 NA Mus musculus 50 Stx4a ENSMUSG00000030805 ENSMUST00000033075 1 1 1 80 7 134989634 134989723 TGAAGATCACCAATGCTGG 59 134989767 134989785 ACACAAACACCTCACTCTG 59 NA Mus musculus 50 Hsd17b14 ENSMUSG00000030825 ENSMUST00000033097 2 1 3 99 7 52811754 52812984 AGAGATTTGCAGACTCTGG 58 52814396 52814416 GGGTGTTGAATAAACATCAGC 59 NA InUTR Mus musculus 50 Dnhd1 ENSMUSG00000030882 ENSMUST00000106783,ENSMUST00000058333,ENSMUST00000106780,ENSMUST00000084778 3 4 5 250 7 112789131 112789288 AGAAACTTGCGAGACTTCC 59 112789672 112789690 TGTTCTGCAGGAATACCTG 59 NA DesignNoJunction Mus musculus 50 Ctag2 ENSMUSG00000031181 ENSMUST00000033524 3 1 1 95 X 62301716 62301906 ATTCTCACTGTTAGGTGGAC 59 62301964 62301982 GATGTTTCTCACCACAAGG 58 NA Mus musculus 50 Phka2 ENSMUSG00000031295 ENSMUST00000112377 3 1 4 80 X 156940827 156961212 GTGTTACCAGAACCCAGTC 59 156961253 156961274 CTATAGATATTGTCCCGTACCC 59 NA Mus musculus 50 Nono ENSMUSG00000031311 ENSMUST00000033673 2 1 1 128 X 98637037 98637056 TGTAGTCATTGTGGATGACC 59 98637147 98638277 CGAGGAAATGTAGTCAGCA 59 NA Mus musculus 50 Amelx ENSMUSG00000031354 ENSMUST00000066112,ENSMUST00000112119,ENSMUST00000112118,ENSMUST00000062820 3 4 5 89 X 165621838 165621859 CCCTGGTTATATCAACTTAAGC 58 165620131 165620419 TAACCATAGGAAGGATACGG 57 NA Mus musculus 50 Psmd10 ENSMUSG00000031429 ENSMUST00000112978,ENSMUST00000033805 1 2 2 80 X 137486848 137486959 GAAGAATAGGCATGAGATTGC 59 137486788 137486806 GCTGTAGCATCGTAATGGT 59 NA Mus musculus 50 Grk1 ENSMUSG00000031450 ENSMUST00000033827 1 1 1 80 8 13409425 13409823 GGACAATGATGGCAATATCC 58 13409865 13409884 TAGCCCTTGGTCTTATTCTG 58 NA Mus musculus 50 AI316807 ENSMUSG00000031534 ENSMUST00000033935 2 1 1 95 8 23581985 23582003 AGAAGGGATGTTGTCAGAG 58 23573835 23581927 TCATACTTTCTTGAAACGGG 57 NA Mus musculus 50 Ash2l ENSMUSG00000031575 ENSMUST00000068892,ENSMUST00000110610,ENSMUST00000110609 2 3 3 94 8 26929022 26929041 ATCTCACTGTACAAGAGCTG 59 26927970 26928083 ATGTCACTCATAGGGTGGT 59 NA Mus musculus 50 Anxa10 ENSMUSG00000031635 ENSMUST00000034052,ENSMUST00000034054 2 2 2 86 8 64541829 64541847 ATATTTCTGGCCAAGACCT 58 64539856 64541780 TACAACGAACAATAGCAACC 58 NA Mus musculus 50 Rfx1 ENSMUSG00000031706 ENSMUST00000005600 3 1 1 122 8 86619381 86619399 TGTACTACCTGATCGAGCA 59 86619561 86619704 CTTCTTCATCTTTGTCAGGGT 59 NA Mus musculus 50 1700030J22Rik ENSMUSG00000031847 ENSMUST00000070577 3 1 1 151 8 119497435 119497453 GAAAGGAGTCATGTCTGCT 59 119496007 119496025 TTCTTTGACCAGATGCAGG 59 NA DesignNoJunction Mus musculus 50 Jam3 ENSMUSG00000031990 ENSMUST00000034472 2 1 1 81 9 26906481 26906499 TGATTACGATGGGCATCTG 59 26906340 26906437 GGGCTCTTATAGCTTTCTCC 59 NA Mus musculus 50 Srpr ENSMUSG00000032042 ENSMUST00000034541 3 1 1 104 9 35023386 35023528 CATTGATGACAAGGTGGGA 59 35023596 35023614 TTAAGACTGCGTAGGTCAC 59 NA Mus musculus 50 Icam5 ENSMUSG00000032174 ENSMUST00000019616 3 1 1 168 9 20839267 20839494 TGACTGTTTACAGCTTCCC 59 20839623 20839644 GTAACATTTAACTGGAGCTCAG 59 NA Mus musculus 50 Hcrtr2 ENSMUSG00000032360 ENSMUST00000063140 2 1 1 84 9 76084023 76084042 TCATGGTTGTACTTCTGGTC 59 76080811 76083978 GTGAACATCCCAAATACTCTC 58 NA Mus musculus 50 Rbp2 ENSMUSG00000032454 ENSMUST00000035029 3 1 1 263 9 98399239 98399258 AACTACGACCTGGATTTCAC 59 98410014 98410032 AGAACTCTGCACATGTTCC 59 NA DesignNoJunction, InUTR Mus musculus 50 Armet ENSMUSG00000032575 ENSMUST00000069036 3 1 1 105 9 106793475 106793494 CTCAAAGACAGAGATGTCAC 57 106792621 106793407 CAATGTAGTAGCACAACCG 58 NA Mus musculus 50 Itgbl1 ENSMUSG00000032925 ENSMUST00000100289 1 1 3 156 14 124227113 124239795 CAATGCAGGTACATGTCAC 58 124245667 124245686 AGAACATTCACCACATACAC 57 NA Mus musculus 50 Hsd17b3 ENSMUSG00000033122 ENSMUST00000039832 1 1 1 80 13 64175248 64177670 TTGCAGAAGAGATTGAGAGG 59 64175187 64175207 GGTCATAGATGTCTTCTCTGG 59 NA Mus musculus 50 Abhd10 ENSMUSG00000033157 ENSMUST00000036411,ENSMUST00000066983 2 2 2 93 16 45737696 45737715 TAACTTAGCAGAGTGCACAG 59 45737129 45737640 GGATCCAACCAGTATCTGC 59 NA Mus musculus 50 Trim69 ENSMUSG00000033368 ENSMUST00000036089 2 1 1 88 2 121999048 121999066 GTGTCTTGTTGCCAAAGAC 59 121999118 121999988 GCTTTGTGATGTCTGTGAG 58 NA Mus musculus 50 Rtp1 ENSMUSG00000033383 ENSMUST00000038730 1 1 1 60 16 23429363 23429381 TGTAAGAGTGTGACCACAG 58 23429405 23429423 TCACCTCCTCCATCTTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gabrb3 ENSMUSG00000033676 ENSMUST00000085240,ENSMUST00000039697 1 2 2 94 7 65020934 65020952 AAAGTCATTTGTCCACGGA 59 65021010 65044249 CTGTCGTAGTGATCCTGAG 58 NA Mus musculus 50 Fgb ENSMUSG00000033831 ENSMUST00000048246 2 1 1 87 3 82848193 82848211 GTATCTCATCCAGCCTGAC 59 82847808 82848143 CTGTATGACTGTCCATCCTC 59 NA Mus musculus 50 D230014K01Rik ENSMUSG00000033857 ENSMUST00000043447 2 1 1 84 11 118348176 118348194 CTCTTGGTGAGCTTCTCAC 59 118348242 118348414 CATCAACCACCTGGATCTC 59 NA Mus musculus 50 Slc16a2 ENSMUSG00000033965 ENSMUST00000042664 2 1 1 105 X 100903171 100903189 TTCAACATGCGTGTATTCC 58 100901725 100903103 CATATTTCATCAGGTGCACG 59 NA Mus musculus 50 6330416L07Rik ENSMUSG00000033972 ENSMUST00000074295 2 1 3 185 17 22476161 22476261 AATGTGGCAATGAATGTGAC 59 22475995 22476016 CACATCCACTACATCTATAAGG 57 NA DesignRelaxed Mus musculus 50 Phka1 ENSMUSG00000034055 ENSMUST00000052012,ENSMUST00000113611,ENSMUST00000043596 1 3 3 80 X 99812706 99812724 TTGTTTGGTGTGAAAGGTG 58 99811385 99812662 ATTCAGGATAGACTGGCAG 58 NA Mus musculus 50 Mks1 ENSMUSG00000034121 ENSMUST00000038196 2 1 1 80 11 87670373 87670392 CAACCACGCTATTAACACTC 58 87670434 87670703 ACCTTATAGCCAAGCTTTCC 59 NA Mus musculus 50 Rhov ENSMUSG00000034226 ENSMUST00000037360 3 1 1 273 2 119096654 119096672 CAGCACTAGACACCTTCTC 59 119096030 119096048 AGTACATTGACATCGTCCC 59 NA DesignNoJunction Mus musculus 50 Iqsec1 ENSMUSG00000034312 ENSMUST00000043863,ENSMUST00000101153 3 2 2 83 6 90618784 90619287 GAACCAGTACTATCCCAATGG 59 90618721 90618741 GGAGCGTTGAAGTTTATTAGC 59 NA Mus musculus 50 Plcg2 ENSMUSG00000034330 ENSMUST00000081232 3 1 1 80 8 120101760 120101779 GGATGACCAAGTTTATCGAC 58 120101822 120103691 ACAGATACGTGAGGAACTC 58 NA Mus musculus 50 Pcdh11x ENSMUSG00000034755 ENSMUST00000113358,ENSMUST00000113364 3 2 5 81 X 117515496 117708323 ATATCAGACCGACAATGAAGG 59 117708366 117708384 GGATGAGTCCAGATTTCCA 58 NA Mus musculus 50 Egln3 ENSMUSG00000035105 ENSMUST00000039516 2 1 1 81 12 55284913 55284932 CAGACTTCTGTTCTTCTGGT 59 55282676 55284869 GACAGTCATAGCGTACCTG 59 NA Mus musculus 50 Hectd1 ENSMUSG00000035247 ENSMUST00000042052 3 1 1 80 12 52899744 52901709 TAGCAAAGACTCTGTTACGG 59 52899683 52899702 CTCGAGCTTTATCCAATGGT 59 NA Mus musculus 50 Rmi1 ENSMUSG00000035367 ENSMUST00000042450 2 1 1 168 13 58503809 58503827 CAGAGGATAATGGCGTCTG 59 58508442 58509280 CCACATCTACCACTTAGCAG 59 NA InUTR Mus musculus 50 1110049B09Rik ENSMUSG00000035860 ENSMUST00000095774,ENSMUST00000070876 1 2 2 80 12 33765234 33765252 CCTGGATTCATTTACCAGG 57 33752995 33765191 AGAAATGAGGAAATACCCGA 58 NA Mus musculus 50 Sfrs14 ENSMUSG00000036054 ENSMUST00000093458 3 1 1 81 8 72760626 72760645 ACAGGAGAAATCTAAACGGT 58 72760688 72766403 TGTCCTTAGGAGATCTTGAG 57 NA Mus musculus 50 Mgat5 ENSMUSG00000036155 ENSMUST00000038361 3 1 1 89 1 129284009 129284029 TCAGTGGAGTGACTTAATCAC 59 129284077 129287329 TTCATTATCTCCTTGAGCTCAG 59 NA Mus musculus 50 Calm3 ENSMUSG00000036438 ENSMUST00000040440 1 1 1 80 17 87834541 87834951 TTGATAAGGATGGCAATGG 57 87834479 87834497 CATCTGTTAACTTCTCGCC 58 NA Nonspecific Mus musculus 50 Akap14 ENSMUSG00000036551 ENSMUST00000046557 2 1 1 95 X 34690876 34691827 ACTACTTCAAAGACCAGGAG 58 34690800 34690818 TTAAAGGGAATGGACTCCA 57 NA Mus musculus 50 Slitrk2 ENSMUSG00000036790 ENSMUST00000036043 1 1 1 60 X 63908170 63908190 AGTTCACTAACATCTCTGACC 59 63908209 63908230 GTTAGGTAGAGTTTCTTTGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Snx26 ENSMUSG00000036882 ENSMUST00000044338 1 1 1 83 7 31313723 31313741 CTCTGCAAGCTCTACTTCC 59 31313557 31313676 CACTGACATAGCCTCACTG 59 NA Mus musculus 50 Zfp157 ENSMUSG00000036898 ENSMUST00000085856 2 1 1 76 5 138888771 138888789 CTTAAGGTTGGAGCATGGA 59 138888829 138896219 CTTCAAGAACACCTGGGAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Slc22a20 ENSMUSG00000037451 ENSMUST00000041827 1 1 1 80 19 5981744 5982841 CTATTCTTGGTGGCTTCCA 59 5981682 5981700 TTCTGAAGGTTCTGCACAG 59 NA Mus musculus 50 Slc25a43 ENSMUSG00000037636 ENSMUST00000047655 3 1 1 97 X 34297855 34297873 AACTTTGCCAATGTCTGTG 58 34297933 34315493 AGATAAGGACTTTGAGCCTG 59 NA Mus musculus 50 Ctnna1 ENSMUSG00000037815 ENSMUST00000042345 2 1 1 80 18 35395285 35395303 CTCCAACAATGAAGAAGGC 58 35395347 35399047 GCATTGATAACCTGAGGAC 57 NA Mus musculus 50 Darc ENSMUSG00000037872 ENSMUST00000038227 3 1 1 68 1 175263058 175263536 GAACTGTCTGTATCCGGTG 59 175263008 175263027 CAGCTGTCGAAAGTAAACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Igsf8 ENSMUSG00000038034 ENSMUST00000085912,ENSMUST00000039506 3 2 2 63 1 174246610 174246628 CACAGATACGCAGTACCTG 59 174246653 174247499 CTCATCTGGAAGAACTCTCAG 59 NA DesignRelaxed Mus musculus 50 Dbil5 ENSMUSG00000038057 ENSMUST00000040806 3 1 1 60 11 76031948 76031966 TGGATGGTAAACAAAGGGA 58 76031987 76032008 CCACTTTAGCAATGTAGATCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Scarf1 ENSMUSG00000038188 ENSMUST00000042808 1 1 2 80 11 75337573 75337592 TTCTCTTCTGATCCTGACTC 58 75337634 75338885 CATAGGGACCATCTCTTCTC 58 NA Mus musculus 50 Rilp ENSMUSG00000038195 ENSMUST00000042972 2 1 1 139 11 75325362 75325380 TCAAGGCCAAGATGTTAGG 59 75325928 75326213 CCATAAGCCAAAGAAATTCTGG 59 NA Mus musculus 50 Uqcrfs1 ENSMUSG00000038462 ENSMUST00000042834 3 1 1 60 13 30632837 30632855 CGAAGTGTCCCAGTTAAGG 59 30632795 30632815 CCATTCAGGTTTCTTTACTCG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tfdp1 ENSMUSG00000038482 ENSMUST00000079071 2 1 1 252 8 13370623 13370642 AACCACATTCTACCAAACGA 59 13371418 13372481 TCTTGAAGGCAATTTGCTG 58 NA DesignRelaxed Mus musculus 50 Cbfa2t2 ENSMUSG00000038533 ENSMUST00000109725,ENSMUST00000045270,ENSMUST00000109720,ENSMUST00000109717,ENSMUST00000099178,ENSMUST00000109718 1 6 7 80 2 154346907 154346925 GATGAGTTGGTAGACCACC 59 154346969 154349654 AATGCAATTCAGTGCATGG 59 NA Mus musculus 50 Akap12 ENSMUSG00000038587 ENSMUST00000045730,ENSMUST00000092717 2 2 2 87 10 5993390 6032693 GTTGAAGATGTTGGACAGAG 58 5993322 5993341 CTTCAACAACTGTGGAACTG 59 NA Mus musculus 50 Hoxb4 ENSMUSG00000038692 ENSMUST00000049241 1 1 1 60 11 96180107 96180126 CAACTCAAACTATGTCGACC 58 96180147 96180167 GTAATCGCTCTGTGAATACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nup205 ENSMUSG00000038759 ENSMUST00000043815 2 1 1 80 6 35191073 35191092 AAGATAATAATGCGGAGGGA 58 35191135 35191334 TCACATTGGCACAAATCTG 58 NA Mus musculus 50 Smurf1 ENSMUSG00000038780 ENSMUST00000110677,ENSMUST00000085684,ENSMUST00000100461 1 3 3 80 5 145655420 145657369 TGAAGGCTATGAGCAAAGG 59 145655358 145655376 TCATGCCATGTACTGACTC 59 NA Mus musculus 50 Ralgps1 ENSMUSG00000038831 ENSMUST00000113165,ENSMUST00000042615,ENSMUST00000113167,ENSMUST00000091039,ENSMUST00000113162 1 5 6 80 2 33116047 33116065 AGACAACTACAAGCGAACC 59 33030056 33116007 AGAAGGTAGATTCCTAGATAGGG 59 NA Mus musculus 50 Osbpl2 ENSMUSG00000039050 ENSMUST00000040668 1 1 1 81 2 179884926 179884944 ACACAATGTCATCCTTGGG 59 179884987 179885736 ACACTTATCTCCAGTTCTGTG 59 NA Mus musculus 50 Mtmr7 ENSMUSG00000039431 ENSMUST00000048890,ENSMUST00000048898 1 2 2 80 8 41682687 41682707 GTGAAGAATACAAGCGAATGG 59 41675883 41682647 AGTCACAAACTCTGTAGTCTC 59 NA Mus musculus 50 BC021608 ENSMUSG00000039438 ENSMUST00000044694 3 1 1 75 9 44610849 44610868 CCATCTTCAACCCTGATACC 59 44609865 44610811 TCTTCATCTCCCTCCTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Il22ra2 ENSMUSG00000039760 ENSMUST00000105526,ENSMUST00000036564 3 2 2 81 10 19351574 19352579 CAATTCACTAGAGAAGGAGCA 59 19352621 19352640 GCTGGAATGAGGTATCAGAC 59 NA Mus musculus 50 Fgl2 ENSMUSG00000039899 ENSMUST00000035799 1 1 1 80 5 20879058 20879076 TTGTGGTCAACAGTTTGGA 59 20879120 20881083 TTAGATGTTGAACCGGCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 A530088I07Rik ENSMUSG00000039934 ENSMUST00000036031 3 1 1 80 5 20795693 20795866 AAACTACAGGAAAGAGCCTC 59 20795908 20795927 ATGAAGTAGTTCAGAGGCAG 59 NA Mus musculus 50 Zfp292 ENSMUSG00000039967 ENSMUST00000098163,ENSMUST00000047950 2 2 2 80 4 34787129 34787148 GTTAAAGCTCGACCATACCT 59 34786884 34787086 TTCAACACAGCTTAATGCC 58 NA Mus musculus 50 BC052040 ENSMUSG00000040282 ENSMUST00000110918 3 1 1 81 2 115495327 115495348 CTGTTATAAACAGTATGCTGCG 59 115495389 115495755 TTCACGATGCACTGATAGAC 59 NA Mus musculus 50 Slc25a24 ENSMUSG00000040322 ENSMUST00000029477 3 1 1 91 3 108952481 108957922 CTTCAAAGCATCGACTCTG 58 108957977 108957995 TCCTCAATGTCTGTCACAG 58 NA Mus musculus 50 Q6UJB9-2 ENSMUSG00000040576 ENSMUST00000047305 2 1 1 95 5 135378460 135378478 ATCACTTTAGTCTGGGCTG 58 135377788 135377807 AAGAGCATTGGTAAGGACTG 59 NA DesignNoJunction Mus musculus 50 Mat2b ENSMUSG00000042032 ENSMUST00000040167,ENSMUST00000109307 3 2 3 79 11 40501282 40505982 GAGGAGGAAGTGAACATCC 59 40501221 40501239 TCTTTGTAAACTGCTCTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Wdr60 ENSMUSG00000042050 ENSMUST00000039349 1 1 1 80 12 117463405 117463424 GATCCACCATTATGTGAGAC 57 117457352 117463362 GATGTGAGGATTCCATCAG 57 NA Mus musculus 50 B230209C24Rik ENSMUSG00000042182 ENSMUST00000115161,ENSMUST00000062289 3 2 2 81 1 33921417 33921435 CCAACTCTACTTCCAGCTC 59 33920766 33921372 CTCTCAATCGTGAACTGCT 59 NA Mus musculus 50 Anubl1 ENSMUSG00000042213 ENSMUST00000112900 1 1 2 80 6 116238132 116238150 TCCGTGTGGTAGATAGAGG 59 116243805 116252056 GTGAGTGTATCTGAGTCCC 58 NA Mus musculus 50 Gm944 ENSMUSG00000042680 ENSMUST00000049260 1 1 1 87 18 21288510 21289841 CATAACATCATCACTCAGAGTG 58 21288444 21288462 CAGAGTCACTCTTCACTCG 59 NA Mus musculus 50 AU042671 ENSMUSG00000042744 ENSMUST00000042614 1 1 1 99 5 121808254 121808272 ATCTTGCTATCACACCAGC 59 121808335 121809315 ATAGGCACATTTGAGAGGC 59 NA Mus musculus 50 1200015N20Rik ENSMUSG00000043259 ENSMUST00000062883,ENSMUST00000105436 3 2 3 64 10 70017323 70019991 TAAACAGACGGGAAGAAGC 59 70020018 70020037 ATTCACAGTACTCATCTGCC 59 NA DesignRelaxed Mus musculus 50 NM_134174.2 ENSMUSG00000044089 ENSMUST00000059171 1 1 1 60 6 56936110 56936130 CCAGTAATCCTTACTGTTCAG 57 56936152 56936170 CCAAAGGAGTAATTGTGGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Dsg2 ENSMUSG00000044393 ENSMUST00000059787 1 1 1 80 18 20757156 20759819 GTTACTTCACAGAGAAAGCG 58 20759862 20759880 GAGAGTAAACGAGAAGGCA 59 NA Mus musculus 50 Hs3st5 ENSMUSG00000044499 ENSMUST00000058738 2 1 1 168 10 36348206 36421743 AAGATGTGAAGGTGCTCAC 59 36548511 36548529 CACCTGCTGTTTGAATAGC 59 NA InUTR Mus musculus 50 AY074887 ENSMUSG00000044820 ENSMUST00000054018 3 1 1 60 9 54798321 54798342 CAAATCGTTTACTCTTCCAGTC 59 54798282 54798302 GCTAAGAGGAAGAACAAAGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lrtm1 ENSMUSG00000045776 ENSMUST00000055662 1 1 1 69 14 29835335 29835353 CAACCCTTGGATTTGTGAC 58 29835386 29840511 CCCTTGAAAGGTGAATCTC 57 NA DesignNoJunction Mus musculus 50 Tmem104 ENSMUSG00000045980 ENSMUST00000100235,ENSMUST00000061450,ENSMUST00000106555 1 3 3 114 11 115058566 115058584 TGTTTAACCTCATCGTGGG 59 115058662 115062142 GTCACAAAGCTCATGAAGC 59 NA Mus musculus 50 Pilra ENSMUSG00000046245 ENSMUST00000058897,ENSMUST00000110980 2 2 2 80 5 138265247 138265265 AACCAGTGAGAAACATGAG 57 138264812 138264989 ACGATGTTATTATCCTTGGG 57 NA Mus musculus 50 1700067K01Rik ENSMUSG00000046408 ENSMUST00000060357 2 1 1 83 8 86527307 86527325 TATAAGAAGATGCGCTGGA 58 86527369 86527833 CAAGAAGTAGTAATCCACATGG 58 NA Mus musculus 50 Slitrk4 ENSMUSG00000046699 ENSMUST00000069926,ENSMUST00000114679 3 2 2 60 X 61524516 61524535 CCAACATCGAATTGAAGTCC 59 61524475 61524495 GGCTTGTTTAAGAGTTTAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Irgm ENSMUSG00000046879 ENSMUST00000049519 1 1 2 83 11 48682083 48682103 CTCGGATCTTATCATGAAACC 58 48680462 48680480 GGAGCATAATGGGTCTCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Ccdc108 ENSMUSG00000047021 ENSMUST00000094844,ENSMUST00000057511 3 2 2 102 1 74973267 74973602 TTGGTTTCTGTAGAGGTCC 58 74973183 74973202 TTCTCAATCCACAGAGTCTG 59 NA Mus musculus 50 1110012D08Rik ENSMUSG00000047090 ENSMUST00000051011 3 1 1 96 10 128238275 128238414 CAGCTCCAAGTTATCTCCA 58 128238197 128238215 CAATCAGAATCCAGGTCCA 58 NA Mus musculus 50 Taf9b ENSMUSG00000047242 ENSMUST00000113495,ENSMUST00000055497 3 2 2 130 X 103413776 103414244 TTTGCTTTCCGATATGTGAC 58 103413665 103413683 GAGGTAAAGGACTGGTCAG 58 NA Mus musculus 50 MGI:2177522 ENSMUSG00000047444 ENSMUST00000050678 3 1 1 60 11 73858221 73858240 CACTTCTACTGTGACCTTCC 59 73858180 73858199 CATTGAGGTAGATGCTGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tsp50 ENSMUSG00000048752 ENSMUST00000051097 2 1 1 129 9 110766281 110766299 CTGAACAGCAAGAAATGTG 57 110766389 110766794 CAGTTATCTCATAGCAGAACTC 58 NA Mus musculus 50 Dcun1d3 ENSMUSG00000048787 ENSMUST00000059851,ENSMUST00000098080,ENSMUST00000106519 3 3 3 102 7 127001564 127002905 CAAATTCACCAGGAAGGAG 58 127001480 127001498 TTTGGCTTCTGTTAAGAGG 57 NA Mus musculus 50 Olfr173 ENSMUSG00000049362 ENSMUST00000049940 2 1 1 63 16 58797407 58797425 TTGTGCCTGTGCTATTACC 59 58797362 58797383 AGAGATTATTCTGTCCTCAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mrgprg ENSMUSG00000050276 ENSMUST00000058092 2 1 1 60 7 150951065 150951083 GGCTTCTCTATTGCTACGA 58 150951023 150951041 AGGTGACTGGGAAGTAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700034J04Rik ENSMUSG00000050325 ENSMUST00000055358 3 1 1 62 12 11228689 11228707 TATTCCACAAAGACTGCCT 58 11228645 11228663 TGCTTGAGGGATACAAGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1378 ENSMUSG00000050343 ENSMUST00000052285 1 1 1 60 11 50783378 50783396 CCTTCATCTACAGCCTGAG 59 50783419 50783438 CTACACATGAGTTTCCTGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Foxl2 ENSMUSG00000050397 ENSMUST00000051312 2 1 1 66 9 98856341 98856359 GAGAAGAACAAGAAGGGCT 59 98856389 98856407 TGATGAAGCACTCGTTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2310028O11Rik ENSMUSG00000050608 ENSMUST00000063040 3 1 1 100 4 138661002 138661778 CTTTAAGAGAAGAATGTGGCC 58 138660922 138660940 GTAGAAGATACGGAGCCTG 58 NA Mus musculus 50 Trhde ENSMUSG00000050663 ENSMUST00000061632 1 1 1 80 10 114225046 114225065 CATATTATTTAGCCTGGGCG 58 114133181 114225005 CATATAATCGGACTACAACCC 57 NA Mus musculus 50 OTTMUSG00000007757 ENSMUSG00000050667 ENSMUST00000073462 1 1 1 60 11 60484308 60484326 TCTTCATCAAGAACCTGGA 57 60484266 60484285 GCAGAGAAAGTGTCATACAG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Pdik1l ENSMUSG00000050890 ENSMUST00000088774 2 1 4 119 4 133840214 133840232 GAGTGCATCCTACAGAAGG 59 133835409 133835427 TTTAAGACTTGCACCACCA 59 NA DesignNoJunction Mus musculus 50 A630018P17Rik ENSMUSG00000051224 ENSMUST00000112188,ENSMUST00000112187 2 2 3 195 X 162943758 162945648 AATAGCTGGACTTTCCAGG 58 162941281 162941299 GTTGCTCAATCAAGGAAGC 59 NA InUTR Mus musculus 50 Bbs12 ENSMUSG00000051444 ENSMUST00000057975,ENSMUST00000108121 3 2 2 60 3 37218520 37218538 CATCTCCGTTATTGTCCAC 57 37218562 37218580 AAGAATTTGGGTGACTCAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Kctd19 ENSMUSG00000051648 ENSMUST00000063071 3 1 1 82 8 107912504 107912958 CAGACCCTGATGAAGTACC 59 107912440 107912458 TGAATGAGCAAGGTCTGTC 59 NA Mus musculus 50 1190017O12Rik ENSMUSG00000051989 ENSMUST00000063641 1 1 1 122 16 92301588 92305550 TATCAGAACTTCCAGCTCC 58 92305636 92311057 GTGTTCAAGAACCTTCCAG 58 NA InUTR Mus musculus 50 Hbb-bh1 ENSMUSG00000052217 ENSMUST00000063957 2 1 1 139 7 110990389 110991217 TGAGAACTTCAAGCTCCTG 59 110990268 110990286 AATGGTACTTGTGGGACAG 59 NA Mus musculus 50 Hist1h1d ENSMUSG00000052565 ENSMUST00000045301 2 1 1 63 13 23647415 23647433 AAGAAGACTCCGAAGAAGG 58 23647460 23647478 TCTTGGAAACTTTCTTGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 4930515G01Rik ENSMUSG00000052870 ENSMUST00000064959 2 1 1 230 5 115224803 115224822 CAACAAACAACGATCTGTGG 59 115224592 115224610 GTTTCTGACCAATCGTGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm672 ENSMUSG00000052928 ENSMUST00000065082 2 1 1 88 18 75595053 75596833 TCTATGGAGCTACAAAGCAC 59 75594984 75595002 ATCTTATCTCTTGCGCTGG 59 NA Mus musculus 50 BC048502 ENSMUSG00000053508 ENSMUST00000065978 1 1 1 89 15 103275026 103275044 TAATGCTTGTCATGTGGTC 57 103274798 103274973 TTAAGTGGCTCATCATCCA 58 NA Mus musculus 50 Tll1 ENSMUSG00000053626 ENSMUST00000066166 2 1 1 80 8 66517306 66517324 CCAGACAAGTATCCAAGCA 59 66504064 66517263 ATTGAAGGCTAATGTGATGC 58 NA Mus musculus 50 Tusc1 ENSMUSG00000054000 ENSMUST00000066774 3 1 1 62 4 93001036 93001055 TTCTCTTATACAACCCACCT 57 93000993 93001011 TTCATGGGCTATCCAAGTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Umodl1 ENSMUSG00000054134 ENSMUST00000066554,ENSMUST00000087861,ENSMUST00000066981,ENSMUST00000114555 2 4 4 82 17 31103652 31103670 GCTCTGGACTTCAGAAGTG 59 31103715 31105409 CATGCTCTTCTCTGTACCTG 59 NA Mus musculus 50 EG235327 ENSMUSG00000054156 ENSMUST00000067007 1 1 1 80 9 49076761 49082305 CTCGTCAGTTTAGTTCAGG 57 49082348 49082367 ATGTTGATAAATGTGGGAGG 57 NA Mus musculus 50 Syne2 ENSMUSG00000054397 ENSMUST00000067436 2 1 1 80 12 76981494 76981512 TTGCTGACATTGTAGAAGG 57 76981555 76989150 GCTTCTCAATATGAAAGTGC 57 NA Mus musculus 50 BC050078 ENSMUSG00000054519 ENSMUST00000108770,ENSMUST00000057799 3 2 2 88 11 59278563 59278960 TTCTATAGAGAAAGGGTGGG 57 59277769 59277787 CAGAGTTGGCTATGATGTG 57 NA Mus musculus 50 Ugt1a1 ENSMUSG00000054545 ENSMUST00000113142,ENSMUST00000073772,ENSMUST00000058237,ENSMUST00000113138,ENSMUST00000113135,ENSMUST00000113137,ENSMUST00000113134,ENSMUST00000014263,ENSMUST00000097659,ENSMUST00000049289,ENSMUST00000073049 1 11 11 80 1 90112869 90112888 ATGTCCTTGAAATGACTGCT 59 90112930 90114718 TGATGTTCTCCTTGTAGCTC 59 NA Nonspecific Mus musculus 50 Sfrs11 ENSMUSG00000055436 ENSMUST00000040591,ENSMUST00000089922,ENSMUST00000098488 1 3 5 252 3 157694609 157699494 AGAAACTTCTTTCGGGAGG 59 157689782 157689801 TAACAAAGCAGACACGAGAG 59 NA DesignNoJunction Mus musculus 50 Gja6 ENSMUSG00000055691 ENSMUST00000069417 3 1 1 60 X 157341071 157341090 TTCATCAACTGTTCTCACCA 59 157341030 157341048 AGAAAGTTCCACTGGAACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Eef1d ENSMUSG00000055762 ENSMUST00000055220 1 1 9 174 15 75731586 75731604 CTATGAGCAGATGAACGGG 59 75731061 75731079 AATCAGACATGCTGTTTGG 58 NA DesignNoJunction Mus musculus 50 4930458L03Rik ENSMUSG00000056223 ENSMUST00000070216 3 1 1 161 13 65018973 65021034 GCCTCAGATACAGATGACC 59 65021673 65021691 GAGTTCAAATGGTGTCCTG 58 NA DesignNoJunction Mus musculus 50 Olfr1350 ENSMUSG00000056696 ENSMUST00000070985 1 1 1 60 7 6523518 6523539 CCGCCATATTCTATTCTATCCT 59 6523557 6523578 TTTCTGAGGCTGTAGATAAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lce1a1 ENSMUSG00000057609 ENSMUST00000074142 2 1 1 176 3 92451110 92452196 TGTGTACCTGGAATCTTGC 59 92450952 92450970 GACTACAGCAGGAAGACAC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Krtap6-3 ENSMUSG00000057855 ENSMUST00000079151 2 1 1 111 16 89084342 89084360 AGGATACTACGGAGGTCTG 59 89084434 89084453 ATAACCATAGCCACCATAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr605 ENSMUSG00000058079 ENSMUST00000080660 3 1 1 60 7 110590960 110590979 TTACGTTCTTATCCTCCGTG 59 110590919 110590938 GGCTTTAAGACTTGCTTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cd300c ENSMUSG00000058728 ENSMUST00000106580 2 1 1 81 11 114820917 114820937 ATGATGCCTACTTACAGATCG 59 114818946 114820874 CGTGAACCTTTGAAAGGAG 58 NA Mus musculus 50 Zfp708 ENSMUSG00000058883 ENSMUST00000109743 2 1 3 176 13 67198745 67198763 TTGAAGTCTTCATCAACGC 58 67175103 67175772 TAGAGAAAGCAAGACCCAG 58 NA Mus musculus 50 Col25a1 ENSMUSG00000058897 ENSMUST00000106353,ENSMUST00000080335 1 2 2 133 3 129885726 129885744 CACCTTTAGAGTGCAACTG 58 130142086 130142239 TTGTTCTCCCTTATCACCT 57 NA Mus musculus 50 Cycs ENSMUSG00000058927 ENSMUST00000073080 1 1 1 60 19 24950393 24950412 GATGCCAACAAGAACAAAGG 59 24950434 24950453 TCTCCAAATACTCCATCAGG 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 B3gnt8 ENSMUSG00000059479 ENSMUST00000076034 2 1 1 60 7 26414020 26414038 GAAGACCTTCTTTGAAGGG 57 26414061 26414080 TGAGATTACATAGCCACCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nhs ENSMUSG00000059493 ENSMUST00000087085,ENSMUST00000081569 3 2 2 82 X 158275350 158277745 TGCAGTCATTCACAGATCC 59 158275286 158275307 GAACTCTTGATTTGCTTCTGAC 59 NA Mus musculus 50 Sohlh1 ENSMUSG00000059625 ENSMUST00000076989 2 1 1 105 2 25700782 25700800 TTGTCATTCAGTGAGCCAG 59 25700106 25700124 CAGGAACAATGTCACTTGC 59 NA DesignNoJunction Mus musculus 50 Cend1 ENSMUSG00000060240 ENSMUST00000084436 3 1 1 213 7 148613783 148613801 GAATCCCGAGGAAAGTCAG 59 148613588 148613606 TGAGAAGTACAGGATCTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Refbp2 ENSMUSG00000060244 ENSMUST00000081527 1 1 1 78 1 173434180 173434198 TATGAAGCAGTACAAGGGC 59 173434240 173434258 CTGTGGATCGATCTGTGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Med9 ENSMUSG00000061650 ENSMUST00000081980 3 1 1 191 11 59761974 59774072 TCAAATGCATGGACAAGGA 59 59774227 59774245 TCTTGTACTTCTGCAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cd2ap ENSMUSG00000061665 ENSMUST00000024709 2 1 1 88 17 42942169 42942187 AAAGAAATTCCGTGGACGA 59 42935598 42942118 CAGTTCTTTCCCATGATCCT 59 NA Mus musculus 50 Rpl27a ENSMUSG00000062461 ENSMUST00000080866 2 1 1 60 13 99674359 99674377 TACCACTTGAAGAGGAACC 58 99674401 99674419 ATGTCCACGGTTTATCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rpl35 ENSMUSG00000062997 ENSMUST00000080861 3 1 1 81 2 38860305 38860323 TCTGAAGGTGGAATTGTCC 59 38859699 38860260 AACGACTCGTATCTTGGAG 58 NA Nonspecific Mus musculus 50 Olfr508 ENSMUSG00000063764 ENSMUST00000072914 1 1 1 60 7 115773509 115773527 TGGAACCTGGAAACTACAC 59 115773551 115773569 GCATCCTCTGTAAATCCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dzip3 ENSMUSG00000064061 ENSMUST00000114516,ENSMUST00000023327 2 2 2 80 16 48935657 48935675 AGCTGCTGTAGATAGTTGG 58 48933992 48935614 TGTTCATTGTACTGTGTCCT 58 NA Mus musculus 50 mmu-mir-410 ENSMUSG00000065497 ENSMUST00000083563 1 1 1 60 12 110981930 110981948 CTTGAGGAGAGGTTGTCTG 59 110981971 110981990 GCCATCTGTGTTATATTCGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000066331 ENSMUSG00000066331 ENSMUST00000084967 1 1 1 60 12 112318848 112318866 ATATGATGGGACGATTCGG 58 112318890 112318908 TGAAACACGACTAATGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp617 ENSMUSG00000066880 ENSMUST00000093438 1 1 1 89 8 74453087 74455928 GGAAATCTAAGATACCAAGTGG 58 74455978 74455996 AGGATCTGGAATCTCACTG 58 NA Mus musculus 50 Cyp2c66 ENSMUSG00000067229 ENSMUST00000087234 1 1 1 104 19 39245547 39251035 AGAAGTCACAGCCAAAGTC 59 39251103 39251121 AACACAGCATCAGTGTAGG 59 NA Nonspecific Mus musculus 50 Pramel3 ENSMUSG00000067360 ENSMUST00000113176,ENSMUST00000087490 2 2 2 90 X 131843982 131844001 AACTGAGTCATATGAACCAC 57 131844051 131844649 GTAGATAGTACTCTCAGGACAG 58 NA DesignRelaxed Mus musculus 50 OTTMUSG00000016571 ENSMUSG00000067480 ENSMUST00000108947 1 1 3 80 2 177291675 177291694 ATCCTTCTCAGAAGAGTCTC 57 177291734 177291962 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 Cyp2d11 ENSMUSG00000068085 ENSMUST00000089128 3 1 1 88 15 82220448 82220468 ACAAGTCGTGACAGAAGTG 59 82219975 82219993 CAGTCTCATCTTTCAGCAC 58 NA DesignRelaxed Mus musculus 50 OTTMUSG00000015730 ENSMUSG00000068130 ENSMUST00000109916 2 1 1 60 2 150236976 150236995 CTCTACAGAGATGTGATGCT 58 150236726 150236953 CCCAACTGTAGCCTATAGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Doxl2 ENSMUSG00000068536 ENSMUST00000090063 3 1 1 98 6 48928194 48928442 TGAAGACCAGGATTTGGTG 59 48928504 48928522 CCTACGAAGTTCCTAGACG 58 NA Mus musculus 50 NM_177278.5 ENSMUSG00000069849 ENSMUST00000093007 2 1 1 111 17 69123653 69127150 CAAGAAGGAGCAGATAGATGG 59 69127218 69127241 CAGGATAGAGTTGTAGATCTTCAG 59 NA Mus musculus 50 Olfr893 ENSMUSG00000070312 ENSMUST00000093867 2 1 1 60 9 38017367 38017387 GTGGTTCCCATATCATAACTG 58 38017408 38017427 TTGACATAAGTAAGCAGTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Amy2 ENSMUSG00000070360 ENSMUST00000093996 2 1 1 60 3 113232547 113233318 AATGATGCTTATCAGGTCAG 57 113232506 113232524 TCTCAAGTGCAAGATCCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Hs3st3b1 ENSMUSG00000070407 ENSMUST00000094103 3 1 1 260 11 63735068 63735086 AAGGATAAGACAGTAGGCG 58 63703238 63734844 CATCAAGTCTCGGTACCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ifna7 ENSMUSG00000070907 ENSMUST00000105143,ENSMUST00000094976 2 2 2 115 4 88462579 88462597 ATCACTGTGTTCCTGAGAG 58 88462676 88462694 TTCTCACTCAATCTTGCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 2010203O07Rik ENSMUSG00000070972 ENSMUST00000095070,ENSMUST00000095068 3 2 2 98 4 59033319 59033337 CCCAGTCTCAGTTTGACAG 59 59033399 59035448 GTTCCTGCTTGTAGACCTC 59 NA Mus musculus 50 Olfr172 ENSMUSG00000071510 ENSMUST00000095991 1 1 1 60 16 58760870 58760888 ACCATGATGTCCAAGAAGC 59 58760828 58760846 GGTTTCCAACTATGAAGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nfxl1 ENSMUSG00000072889 ENSMUST00000087216 2 1 2 129 5 72947573 72950261 ATGGCTCAGAACTAATGTCTC 59 72947464 72947482 CCTTCCAAGTCTTCATCCC 59 NA Mus musculus 50 ENSMUSG00000072923 ENSMUSG00000072923 ENSMUST00000101181 3 1 1 80 X 146051749 146051768 GTCCAAGAGGAAGAAATGGA 59 146051808 146063001 CTCTTATTGCAGACAATCTGTC 59 NA Nonspecific Mus musculus 50 EG434019 ENSMUSG00000073045 ENSMUST00000101355 2 1 1 100 6 60032555 60032573 GAGCATGACGTTCTATGTC 57 60033316 60033420 AATAAGCCAAGGACATTGAG 57 NA Mus musculus 50 H2-D1 ENSMUSG00000073411 ENSMUST00000087173 3 1 2 98 17 35403231 35403427 AGAGAAGGAGAAACACAGG 58 35403660 35403819 GTCTTCACGCTTTACAATCTC 59 NA InUTR Mus musculus 50 ENSMUSG00000073493 ENSMUSG00000073493 ENSMUST00000097468 3 1 1 110 1 172914013 172914031 TCTTAGCTTCTTCTCCAGC 58 172915792 172915811 CGTGGAATAATCTGCAACAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Pramel4 ENSMUSG00000073724 ENSMUST00000105759,ENSMUST00000084191 2 2 6 60 4 143656696 143656716 GTGATACAGGTGATCTTTGAG 58 143656738 143656801 ATTCCTGGATTGAGGAGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 6330545A04Rik ENSMUSG00000073733 ENSMUST00000105793,ENSMUST00000097813 2 2 2 83 4 140774522 140774540 CTTCCTGGACAGTTGACTC 59 140774584 140775767 CATGTACTGATCAAACTTGGAC 59 NA Mus musculus 50 ENSMUSG00000073814 ENSMUSG00000073814 ENSMUST00000098000 3 1 1 161 7 139507424 139507442 ATTCATTCCCTGCACAGTC 59 139507567 139507585 TGAGGATGTTGATAGCGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr657 ENSMUSG00000073923 ENSMUST00000098171 3 1 1 60 7 111784290 111784309 CCCTACCATTTACTTTGCTC 58 111784332 111784350 ATGATGAGAATGAGCACGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074256 ENSMUSG00000074256 ENSMUST00000098658 1 1 1 180 9 61219231 61219249 ATGGTGAAGAAGGGAAAGC 59 61219069 61219087 AATATCTACGCCTCCTTGG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Gramd2 ENSMUSG00000074259 ENSMUST00000098661,ENSMUST00000114056 3 2 2 89 9 59562069 59563737 CATCTTTGTGATGATCTGCT 57 59563788 59563807 CTCAGGGAACATAATTGCTG 58 NA Mus musculus 50 Ceacam1 ENSMUSG00000074272 ENSMUST00000098669,ENSMUST00000098668 2 2 4 125 7 26251346 26251367 GCATATTTCCTCTATTCCAGGA 59 26248911 26249877 GTCATCCACCTTGTTAGGA 58 NA Mus musculus 50 2810047C21Rik ENSMUSG00000074393 ENSMUST00000086284 2 1 1 72 7 9317757 9318924 CCAGAAAGAAGACTGTTTATCC 58 9318957 9318975 ATCAAGCAGTGTCCATTCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 EG622408 ENSMUSG00000074651 ENSMUST00000092089 2 1 1 80 13 113787058 113787077 CCTTGCAAACTGAAGAAGAC 59 113787119 113787585 TCAAAGAGGATGAATCTGCA 59 NA Mus musculus 50 Gm813 ENSMUSG00000075002 ENSMUST00000099663 1 1 1 95 16 58615894 58615912 AAGGCTTCAGTGAAATGGT 59 58614819 58615835 TTCAGGCCTCTGAATTTCC 59 NA Mus musculus 50 NM_013859.2 ENSMUSG00000075227 ENSMUST00000099935 3 1 1 89 19 6062126 6062144 CTACACTCTGACAGCACTG 59 6062199 6062217 GGTAAAGTCGATCTCGCTC 59 NA DesignNoJunction Mus musculus 50 ENSMUSG00000075548 ENSMUSG00000075548 ENSMUST00000100447 2 1 1 136 14 68049981 68049999 CTATGGACACATGGCAGAG 59 68048586 68049883 ATTGATGTGTCTTCTCCTCTG 59 NA Mus musculus 50 IGKV4-81 ENSMUSG00000076539 ENSMUST00000103340 2 1 1 161 6 68941043 68941241 AGTCATAATGTCCAGAGGAG 58 68940901 68940920 CAGAATTTGGTAGAAGTGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-23 ENSMUSG00000076699 ENSMUST00000103508 1 1 1 84 12 116002846 116002865 TGACTATGAAATGCACTGTG 58 116002781 116002799 AGTACCACAAGTTTCAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV5-4 ENSMUSG00000076852 ENSMUST00000103664 1 1 1 60 14 54323971 54323990 TCAACTGCAGTTATGAAGAC 57 54324012 54324031 CCAGGTTCTTGCTTATACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 1110005A23Rik ENSMUSG00000078427 ENSMUST00000105230 2 1 1 60 10 128285319 128285337 CAATGTACCTGTAAGCCTG 57 128285361 128285829 AGAAATTCCAAACCTAGCC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 A2A7A2_MOUSE ENSMUSG00000078495 ENSMUST00000105719 2 1 1 70 4 147131932 147135342 AAATACACCACAGGGTCTG 59 147131880 147131898 GACATTCCCATTCCTCCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Rad54b ENSMUSG00000078773 ENSMUST00000070755 2 1 3 80 4 11539519 11539537 GCCATGTCTAGAGTATGGA 57 11539578 11539778 TTCCTCTATTGTACCTGTAGTC 58 NA Mus musculus 50 A2BE20_MOUSE ENSMUSG00000078896 ENSMUST00000109044,ENSMUST00000109042 1 2 3 80 2 175303560 175303580 GATGCTTCTCAGAAGAGTCTC 59 175303620 175303846 TTCCCAACTGTAACCTATAGC 59 NA Nonspecific Mus musculus 50 Glp1 ENSMUSG00000079681 ENSMUST00000115494 1 1 1 81 9 20867383 20867401 AGAGGACTCCACTATGGAG 59 20867144 20867340 GTGCCATATTTCTTGTACCTG 59 NA Mus musculus 50 NP_001098658.1 ENSMUSG00000080145 ENSMUST00000116291 1 1 1 80 7 93950641 93950662 GATGCTTCTACAACATGTAGAC 58 93950701 93951427 AAAGAGAACATCTTCCAGGAG 59 NA Mus musculus 50 Gpa33 ENSMUSG00000000544 ENSMUST00000027847 2 1 2 126 1 168082800 168082818 CTCTATCACCATCGACCAG 58 168082907 168084051 TTTGAAATCCTCAAGGACCA 59 NA Mus musculus 50 Oprm1 ENSMUSG00000000766 ENSMUST00000105609 1 1 21 81 10 3413566 3516054 CTAACCACCAGAAACAAGAG 58 3413504 3413525 CCTAGTAACAGAGTATGTTCCT 58 NA Mus musculus 50 Bcl11a ENSMUSG00000000861 ENSMUST00000109516,ENSMUST00000000881,ENSMUST00000109514,ENSMUST00000109512 3 4 4 105 11 24058345 24063157 CAGGGTATTTGTAAAGATGAGC 59 24063223 24063241 ATCCATGAGTGTTCTGTGC 59 NA Mus musculus 50 Pcbp3 ENSMUSG00000001120 ENSMUST00000001148,ENSMUST00000105411 2 2 3 82 10 76226124 76230616 CCAATGATCTTATAGGCTGCA 59 76226062 76226080 TTTGATCTGAGCTCCAGAC 58 NA Mus musculus 50 Slc19a1 ENSMUSG00000001436 ENSMUST00000105410,ENSMUST00000092387 2 2 2 110 10 76501229 76501248 TTCTATCTCTGCTTCTTCGG 58 76501321 76504575 GATCTCGTTAGTCACCTGC 59 NA Mus musculus 50 Sost ENSMUSG00000001494 ENSMUST00000001534 1 1 1 73 11 101828185 101828203 TTCAGGAATGATGCCACAG 59 101828130 101828148 GTCTGGTTGTTCTCAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Uck1 ENSMUSG00000002550 ENSMUST00000002625,ENSMUST00000113405 1 2 2 188 2 32113860 32113878 TTCTACACCCAGGAGATCC 59 32112175 32113616 GTACTTCTTAGTCGGCAGG 59 NA Mus musculus 50 Pnkp ENSMUSG00000002963 ENSMUST00000107876,ENSMUST00000003044,ENSMUST00000098478 3 3 4 82 7 52115101 52115119 CTTTGACCTAGATGGGACC 59 52115165 52115268 GGTACAGAATCCTCCAGTC 58 NA Mus musculus 50 Crkrs ENSMUSG00000003119 ENSMUST00000107539,ENSMUST00000003203,ENSMUST00000107538,ENSMUST00000092733 1 4 4 80 11 98098087 98102103 AACTTATCAGTCGTCTCTGTG 59 98102145 98102163 TCATGGTGTTGAAGTAGGG 58 NA Mus musculus 50 Brd8 ENSMUSG00000003778 ENSMUST00000003876 3 1 2 96 18 34769593 34770071 CCAGACTGGTGAATGAGAG 59 34769515 34769533 TGTATCATGGGAAGAACCC 58 NA Nonspecific Mus musculus 50 Cacna1b ENSMUSG00000004113 ENSMUST00000114442 2 1 7 130 2 24487514 24487533 TTGTTGCTGTAATCATGGAC 58 24482424 24487421 ATAATGAATCCGGCAACAC 58 NA Mus musculus 50 Hif3a ENSMUSG00000004328 ENSMUST00000108492,ENSMUST00000037762 2 2 3 80 7 17626586 17627956 AGATCTAGATATAGCTCAGGACC 59 17626528 17626546 TGGAAGTCATCATCCATGG 59 NA Mus musculus 50 Chn2 ENSMUSG00000004633 ENSMUST00000114402 2 1 4 178 6 54215195 54223084 TAGGATCTCTTCACTGGTC 57 54236165 54240272 TTAACCCACAATCTGAACAC 58 NA Mus musculus 50 Ly9 ENSMUSG00000004707 ENSMUST00000068878,ENSMUST00000111277 2 2 3 81 1 173535171 173535191 CTACCATGCTCAGATAAACCA 59 173532183 173535130 CTGGAGCTTCTCATAGATGTG 59 NA Mus musculus 50 Pan2 ENSMUSG00000005682 ENSMUST00000105237,ENSMUST00000005825 2 2 3 88 10 127751537 127751555 TGCTGAAGCGAAGTATCTG 59 127751606 127751796 GTTTCTGGTCTGAATTGTGG 59 NA Mus musculus 50 Rfx5 ENSMUSG00000005774 ENSMUST00000107260,ENSMUST00000107254,ENSMUST00000107253,ENSMUST00000107255,ENSMUST00000090837,ENSMUST00000029772 3 6 6 84 3 94760521 94760656 CAGTCCAAATATTGCTACAGTG 59 94760701 94760719 CAGATCCCTTCAAGTCGAG 59 NA Mus musculus 50 Prg4 ENSMUSG00000006014 ENSMUST00000111902 2 1 3 83 1 152307893 152312637 TCATCTCAAGAGCTCTCCT 59 152307828 152307846 TTTACACTGGGAGTCACAG 58 NA Mus musculus 50 Med8 ENSMUSG00000006392 ENSMUST00000084319,ENSMUST00000073881,ENSMUST00000019229,ENSMUST00000106384 1 4 4 152 4 118084959 118084977 TCAAACTGAAGGACGAGTG 59 118085093 118085282 CTCTGGATCTGCTTCTGAG 59 NA Mus musculus 50 Ptbp1 ENSMUSG00000006498 ENSMUST00000092324,ENSMUST00000095457,ENSMUST00000057343 1 3 3 157 10 79322121 79322139 GTAAACTCCGTCCAGTCTG 59 79322259 79322357 TTAGAGAAGATCTGGTGCAG 58 NA Mus musculus 50 Pcdha1 ENSMUSG00000007440 ENSMUST00000115661 3 1 9 181 18 37114765 37114784 AGAGGATCAATTGCAGTCTG 59 37318983 37319001 TTGCACTGGATACTGTTGG 59 NA DesignNoJunction Mus musculus 50 Hnrph1 ENSMUSG00000007850 ENSMUST00000077817 1 1 3 137 11 50197390 50197408 ATGGTAGCCAAATGATGGG 59 50198232 50199290 CTCCTTGGCTACCATATCC 58 NA Mus musculus 50 Ebf3 ENSMUSG00000010476 ENSMUST00000033378 1 1 2 113 7 144390862 144390880 CAGCACTAGCATGAATGGA 59 144390255 144390785 TTCTGTTTCATGCCGTAGG 59 NA Mus musculus 50 Akt1s1 ENSMUSG00000011096 ENSMUST00000107885,ENSMUST00000054343,ENSMUST00000107882,ENSMUST00000107880 2 4 4 61 7 52108283 52108301 TGAAACAGAGACATCTGGG 58 52108326 52109164 CCATCATGAAGAGACCTCC 59 NA DesignRelaxed Mus musculus 50 Dhdds ENSMUSG00000012117 ENSMUST00000105886 3 1 5 84 4 133550133 133550151 CAAACGTTCCAAGAGTGAG 58 133547286 133550085 GAGGAAACACTGTTCTTCC 57 NA Mus musculus 50 Abo ENSMUSG00000015787 ENSMUST00000102900,ENSMUST00000114045,ENSMUST00000015931 1 3 3 90 2 26703793 26703811 TTCAGAAGCCAGAACTTGG 59 26701597 26702099 GAACATCTTTCCTAGTGGGT 59 NA Mus musculus 50 Pls3 ENSMUSG00000016382 ENSMUST00000033547,ENSMUST00000114059,ENSMUST00000114057 2 3 5 86 X 73044819 73045849 GACATCAAGGATTCCAAAGC 59 73044752 73044770 AATATCTATCCGTGGCTCC 58 NA Mus musculus 50 Cadps2 ENSMUSG00000017978 ENSMUST00000115358,ENSMUST00000018122,ENSMUST00000115362 1 3 8 80 6 23332910 23332929 GCTGCCTTGATCAATTACAC 59 23305917 23331065 GTTCATGGTCTCTGTTTCCT 59 NA Mus musculus 50 Ksr1 ENSMUSG00000018334 ENSMUST00000018478,ENSMUST00000103237 3 2 5 86 11 78829757 78833073 AGTCGGCTGACATTAACAG 59 78829689 78829708 ACATCTTTGGATTACCGGAC 59 NA Mus musculus 50 Akap1 ENSMUSG00000018428 ENSMUST00000018572,ENSMUST00000107904,ENSMUST00000107903 1 3 4 89 11 88701001 88701019 TTCTGAAGCAGACATCTGG 59 88700363 88700948 GCTGAGAGCCTTCTATGTG 59 NA Mus musculus 50 Ncor1 ENSMUSG00000018501 ENSMUST00000018645,ENSMUST00000101067,ENSMUST00000101068 2 3 8 146 11 62192131 62192150 TAGAACATGGTCGTAACTGG 59 62190251 62192022 GTTTCCGTGAAGCTTTCTG 59 NA Mus musculus 50 Cdk5rap3 ENSMUSG00000018669 ENSMUST00000103152 3 1 3 81 11 96772490 96772878 GCAAGAGGATGAGATCGAC 59 96772427 96772445 TATTCCAGGAGTCTCAGCA 59 NA Mus musculus 50 Cpsf4l ENSMUSG00000018727 ENSMUST00000100248,ENSMUST00000018872,ENSMUST00000106617 2 3 5 146 11 113563819 113564598 GTTCTGCAAGGAAGTAGGT 59 113563374 113563392 ACATTACTGGGATGGAACG 59 NA Mus musculus 50 Tnfsf12 ENSMUSG00000018752 ENSMUST00000108648 2 1 5 93 11 69497828 69498173 AGAAGCACAAGAACTCTGAC 59 69497754 69497772 ACTCGTACAATGTCTCCCT 59 NA Mus musculus 50 Tnfsf12 ENSMUSG00000018752 ENSMUST00000094070,ENSMUST00000108650,ENSMUST00000102587 1 3 5 188 11 69507033 69507130 TTATGAGGTTCATCCTCGG 58 69500574 69500592 TTTCCCTCATCAAAGTGCA 59 NA Mus musculus 50 Lgr5 ENSMUSG00000020140 ENSMUST00000020350 3 1 2 86 10 114903234 114903255 CTTTAACTGGAGCAAAGATCTC 59 114899807 114903190 GGTTGTAAGACAAATCTAGCAC 59 NA Mus musculus 50 Phf15 ENSMUSG00000020387 ENSMUST00000109090,ENSMUST00000020655,ENSMUST00000074967,ENSMUST00000109091 3 4 4 200 11 51644124 51644767 CTCAAGGAGATGGAGAAGC 59 51643942 51643960 GTCACAGAAGACCATCTCG 59 NA DesignRelaxed Mus musculus 50 Gabra6 ENSMUSG00000020428 ENSMUST00000020703 2 1 2 93 11 42131241 42133178 GTGGAGATGACTTGGACTG 59 42131166 42131185 GAGTCCAGATCTTACTGACC 58 NA Mus musculus 50 Rps6kb1 ENSMUSG00000020516 ENSMUST00000058286,ENSMUST00000108034 2 2 3 129 11 86333394 86333412 ATCCTCGAGTATCTCAGTG 57 86330742 86330861 ACTGGAAAGTCAATTCAAGG 58 NA Mus musculus 50 Stxbp4 ENSMUSG00000020546 ENSMUST00000020858,ENSMUST00000107875 3 2 4 81 11 90461586 90467277 ATCTAATGCAGACATTGCTC 58 90461524 90461542 GCGAACAGAAGGATTTAGG 58 NA Mus musculus 50 Map2k6 ENSMUSG00000020623 ENSMUST00000100260,ENSMUST00000020949 2 2 2 83 11 110355646 110357656 CTGTTATCCATCGAGACGT 58 110357702 110357721 CACTGATTCCAAAGTCACAC 59 NA Mus musculus 50 Rnf135 ENSMUSG00000020707 ENSMUST00000017839,ENSMUST00000017833 2 2 2 60 11 80012506 80012524 GTCTCTAGCTCCTCTCCTC 59 80012548 80012566 AGTTTCCAGGACTTAAGCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Grin2c ENSMUSG00000020734 ENSMUST00000019007,ENSMUST00000106554,ENSMUST00000003351 1 3 3 88 11 115117057 115117075 CTACGACTTGTACCTGGTG 59 115116728 115117006 GCTTGTAGTATACCTCACCG 59 NA Mus musculus 50 Eral1 ENSMUSG00000020832 ENSMUST00000021183 2 1 2 81 11 77889132 77889235 GTCTTAAACAAGGTAGATTGCC 59 77889072 77889091 CATTGACAACACCTTCAGTG 59 NA Mus musculus 50 Ttc8 ENSMUSG00000021013 ENSMUST00000079146,ENSMUST00000085109 2 2 2 81 12 100195511 100195529 TTCCACGGAGTATTCTCAG 58 100195574 100199627 ACGGTACATTCCTAACCTG 58 NA Mus musculus 50 AI413782 ENSMUSG00000021038 ENSMUST00000072744 1 1 2 89 12 88597435 88597453 GCCTAAGGGAGAATACAGG 58 88594195 88595184 TCTAGTGAACAGACCTTGC 58 NA Mus musculus 50 Rps6ka5 ENSMUSG00000021180 ENSMUST00000043599 1 1 2 80 12 101809200 101812017 TAATGGACAGCTTCATACGT 58 101809139 101809157 TGCTTCTTTCTCTTGATGC 58 NA Mus musculus 50 9030617O03Rik ENSMUSG00000021185 ENSMUST00000110073,ENSMUST00000110070,ENSMUST00000110069,ENSMUST00000069782,ENSMUST00000110068 1 5 5 80 12 102088518 102088536 CCATGGTAGTAGACCAGAG 58 102088579 102091438 GTGTCTTTAGAACTCCTTGC 58 NA Mus musculus 50 Brctd1 ENSMUSG00000021601 ENSMUST00000022092 1 1 2 88 13 77264498 77264516 GATAAGCGGAGTGACTCTC 59 77251933 77251951 TGTGTTATCCCACTTGGAG 58 NA DesignNoJunction Mus musculus 50 Ppwd1 ENSMUSG00000021713 ENSMUST00000022226,ENSMUST00000072775 2 2 2 80 13 105013028 105013181 AGTCACCTTGGAGTTATTGAG 59 105012968 105012986 CATCGCTTTATCATCACCG 58 NA Mus musculus 50 Fyb ENSMUSG00000022148 ENSMUST00000110659 3 1 2 130 15 6593748 6596640 AAGATGATGACGATGGTCTC 59 6601807 6601825 CCTTCCAACACTCATTCCT 59 NA Mus musculus 50 Rab2b ENSMUSG00000022159 ENSMUST00000022765 2 1 2 123 14 52885952 52885971 TAGAATCTCGAAGGGATGTG 58 52884426 52885867 GCTGTATTAATGTAGGCCTC 57 NA Mus musculus 50 Wdr67 ENSMUSG00000022364 ENSMUST00000110178,ENSMUST00000022992 3 2 4 83 15 57795466 57799469 TTTGGAGCATGAAGAAATGC 59 57799514 57799533 ACATCATGTAATCGTGAGGT 58 NA Mus musculus 50 Ciita ENSMUSG00000022504 ENSMUST00000023147,ENSMUST00000100187 3 2 3 169 16 10488511 10501872 TTGCAAGACCATAGTCTGTG 59 10502004 10502244 GTATCTGTGTCTGGCTCTG 59 NA Mus musculus 50 Ptk2 ENSMUSG00000022607 ENSMUST00000110033 1 1 5 80 15 73113776 73122487 GACACATGCAGTAGGAGTC 59 73113714 73113733 AGAGAACAGAAGACCAAAGG 59 NA Mus musculus 50 Iqcb1 ENSMUSG00000022837 ENSMUST00000114819,ENSMUST00000023535 1 2 2 82 16 36847672 36847690 AAAGCTCCTGCTAGTACTG 58 36847733 36849721 TTCTAAGTCCTTTATAGCAGGC 59 NA Mus musculus 50 Fhl1 ENSMUSG00000023092 ENSMUST00000023854,ENSMUST00000116596,ENSMUST00000114773,ENSMUST00000114772,ENSMUST00000114770 3 5 8 89 X 54043748 54043766 GGAGGACCAGTATTACTGC 59 54043819 54045030 TTACCAAACCCAGTGATGG 59 NA Mus musculus 50 Cd4 ENSMUSG00000023274 ENSMUST00000024044,ENSMUST00000095454 3 2 2 81 6 124822689 124822995 TGTTCAAAGTGACCTTCAG 57 124822626 124822644 ACCTTAGAGTTGCTATCCA 57 NA InUTR Mus musculus 50 Mtch1 ENSMUSG00000024012 ENSMUST00000095427,ENSMUST00000114693 2 2 2 83 17 29476781 29477024 ATCCCTTACACGTGATCTC 58 29475727 29475745 CAATAGAACTCAGCACACC 58 NA Mus musculus 50 Xdh ENSMUSG00000024066 ENSMUST00000024866 3 1 2 80 17 74272428 74272448 TATTTCCTCTGATCATCTGCC 59 74271890 74272386 CTCCAAAGGAGATTCCCTC 59 NA Mus musculus 50 Esco1 ENSMUSG00000024293 ENSMUST00000097670,ENSMUST00000025142,ENSMUST00000115865,ENSMUST00000115864,ENSMUST00000115863 3 5 5 193 18 10586023 10595676 CAGGTTCAGCTCCTAATCAG 59 10582173 10584252 GTGTCCTGCATCTATGACC 59 NA Mus musculus 50 Mrps18b ENSMUSG00000024436 ENSMUST00000025305 1 1 2 81 17 36051694 36051713 GAAGAAGATGCTCCATCCTC 59 36051526 36051653 TGTGGTATTCTTCTGAATCCAG 59 NA Mus musculus 50 Galr1 ENSMUSG00000024553 ENSMUST00000065224 1 1 1 142 18 82574904 82574922 GTACCTTCTGCCCTTACTG 59 82563369 82563387 ATACTACAACGACCACCAG 58 NA DesignNoJunction Mus musculus 50 Lao1 ENSMUSG00000024903 ENSMUST00000025838 1 1 2 92 4 118639747 118639766 TTATGACTCTTACTCCACCA 57 118640010 118640034 CCAGCATTCTCATTATATCCC 58 NA Mus musculus 50 Vldlr ENSMUSG00000024924 ENSMUST00000025866 2 1 2 85 19 27320164 27321095 GTGTCAAAGTACTTCAACTCC 58 27321142 27321160 GAACCAGTCCACTAGTTCG 59 NA Mus musculus 50 Pdcd11 ENSMUSG00000025047 ENSMUST00000072141 1 1 2 80 19 47203791 47204128 GAAATACAAGGAAGCTGGTG 58 47204170 47204189 CCATATTTGATCCAGACAGC 58 NA Mus musculus 50 Gyk ENSMUSG00000025059 ENSMUST00000113978,ENSMUST00000026039 1 2 4 81 X 82956436 82956454 CTCCACATGGAAGAAAGCT 59 82951647 82956392 GAAGATACTAGGGTCACCAC 58 NA Mus musculus 50 Dus1l ENSMUSG00000025155 ENSMUST00000106135,ENSMUST00000026151,ENSMUST00000106133 1 3 3 80 11 120655249 120655589 AAGAATGATTCTGTTGGCTC 58 120655188 120655206 GTCTTGTCAATTTCTGGGA 57 NA Mus musculus 50 Itga7 ENSMUSG00000025348 ENSMUST00000073153,ENSMUST00000105228 3 2 5 180 10 128377979 128378504 CCTATAACTGGAAGGGCAC 59 128378891 128378911 TCTGAGCTATCAATGTTGGTC 59 NA Mus musculus 50 Fgf14 ENSMUSG00000025551 ENSMUST00000095529 1 1 2 134 14 124535511 125075746 ACAAGAACCCAACTGATCC 59 124531780 124535413 TGAACAGTGTGGAATTGGT 59 NA Mus musculus 50 Scotin ENSMUSG00000025647 ENSMUST00000112059,ENSMUST00000026737,ENSMUST00000059097 2 3 3 62 9 108958580 108958598 CTGTATAAGATGTGCTGCC 57 108958817 108958835 AACCACGGTAGTAGTTGTG 59 NA DesignNoJunction Mus musculus 50 Taf3 ENSMUSG00000025782 ENSMUST00000114909,ENSMUST00000026888,ENSMUST00000114906 1 3 4 130 2 9839797 9839815 CAGATCTGGATCTGTCCAG 58 9838049 9838067 CACTGCATCTCTTCTGGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 NP_001038978.2 ENSMUSG00000026014 ENSMUST00000090293,ENSMUST00000027168 3 2 2 80 1 60584321 60590139 CTTACTCAGAGTTTGGATTCTG 58 60584262 60584281 GTTGGCCATATTTGTTTCCT 58 NA Mus musculus 50 Kdelc1 ENSMUSG00000026047 ENSMUST00000065767,ENSMUST00000027213 1 2 2 80 1 44164662 44164680 GAGAGGGTATGAAGAGGGT 59 44163940 44164618 CATCTTTGGCCTTTCTCCT 59 NA Mus musculus 50 Ccdc93 ENSMUSG00000026339 ENSMUST00000112621 1 1 4 138 1 123358044 123358062 ATACGGATTTAGTCGCCAG 59 123358550 123358824 TGACTGAATACGCTCTTCG 59 NA Mus musculus 50 Nmt2 ENSMUSG00000026643 ENSMUST00000081932,ENSMUST00000102989,ENSMUST00000091504 2 3 3 60 2 3233471 3233492 GTAGAAACATGACCTTACAGAG 58 3233510 3239853 GTCTTTGTAACATCTGGAAGTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Nr5a1 ENSMUSG00000026751 ENSMUST00000112883,ENSMUST00000028084 1 2 2 96 2 38555762 38555780 CCAAGAGTTAGTGCTCCAG 59 38549774 38555702 GAATTTCACATCGAGGCTG 58 NA Mus musculus 50 Kcnj3 ENSMUSG00000026824 ENSMUST00000067101,ENSMUST00000112633 1 2 4 94 2 55299371 55299390 CTTCTATGACCTATCCCAGC 59 55299447 55447233 GACAAGTCATTCCTGTGGT 59 NA Mus musculus 50 Upp2 ENSMUSG00000026839 ENSMUST00000059102,ENSMUST00000102755 1 2 3 187 2 58630417 58632422 TTTATGAAGGCCAAGGTCG 59 58642452 58642471 TCTGTCAAGAAGTGTCACAC 59 NA Mus musculus 50 D730039F16Rik ENSMUSG00000026870 ENSMUST00000113068,ENSMUST00000028228,ENSMUST00000047447 3 3 3 62 2 34737916 34737934 TGTCAACTGTCCCAATGAG 59 34741392 34741411 ATCTTCTTATCCAGGATGGC 58 NA DesignNoJunction Mus musculus 50 Dab2ip ENSMUSG00000026883 ENSMUST00000112981 1 1 13 89 2 35563799 35563817 CAAATTCCTCACACCAGGA 59 35563870 35564345 TGATGTTGTCACCTTCACC 59 NA Mus musculus 50 Wdsub1 ENSMUSG00000026988 ENSMUST00000112561 2 1 3 131 2 59712304 59712322 GGGCTGTTACTATTACCCG 59 59708532 59711280 TGTTACAGAATCCCGATGC 59 NA Mus musculus 50 Timm10 ENSMUSG00000027076 ENSMUST00000028470,ENSMUST00000111631 1 2 2 107 2 84667859 84669955 CATGTACAACAGAATGACCAG 58 84670024 84670042 GATACACATCGGTCCAGAC 59 NA Mus musculus 50 Hipk3 ENSMUSG00000027177 ENSMUST00000111124,ENSMUST00000028600 1 2 3 81 2 104274539 104274557 CATTGCACATGTTGTCTGG 59 104273984 104274497 GTTCTGCAATGAATTACTCCTG 59 NA Mus musculus 50 Lrrc57 ENSMUSG00000027286 ENSMUST00000102499,ENSMUST00000102498,ENSMUST00000102496,ENSMUST00000090011,ENSMUST00000028742,ENSMUST00000102497 1 6 6 80 2 120434455 120434473 ACCGCCTCTGATAATAGGA 59 120433788 120434412 TCATCAGGTAGAACAGTCAG 58 NA Mus musculus 50 Tyro3 ENSMUSG00000027298 ENSMUST00000110783,ENSMUST00000110786,ENSMUST00000028762,ENSMUST00000110781,ENSMUST00000028763 3 5 5 81 2 119638968 119638987 GCCGAGATTTACAACTACCT 59 119639028 119642393 ACATGAGATCATACACTTCCTC 59 NA Mus musculus 50 4930402H24Rik ENSMUSG00000027309 ENSMUST00000044766,ENSMUST00000110248 1 2 6 80 2 130543074 130545587 GATTGTCACAAGGAATGAAGAC 59 130543015 130543034 TATCGAGAACGTAGCATCTG 59 NA Mus musculus 50 Rassf2 ENSMUSG00000027339 ENSMUST00000028814,ENSMUST00000103182 1 2 2 109 2 131835493 131838312 CAAGTATATGCCCAAGAGTG 58 131833235 131833253 CAATGAACTCGTCTTCCTC 57 NA Mus musculus 50 Tpd52 ENSMUSG00000027506 ENSMUST00000063496,ENSMUST00000091354 3 2 4 99 3 8944679 8944697 TGAAACTCTATCGCAAGCT 58 8943565 8944616 GAAAGCTTGCAATTTCACG 58 NA Mus musculus 50 Phactr3 ENSMUSG00000027525 ENSMUST00000108917,ENSMUST00000108916,ENSMUST00000103066,ENSMUST00000029031,ENSMUST00000108915,ENSMUST00000108914,ENSMUST00000103065 1 7 7 80 2 178066339 178067539 CAAGAAAGCTTAACCAGAGAC 58 178067578 178067599 CTTCCACATAATCACTGAAACG 59 NA Mus musculus 50 Lrrcc1 ENSMUSG00000027550 ENSMUST00000108370,ENSMUST00000091325 2 2 2 80 3 14548187 14548205 TCGATGAGCTACATAAGCA 58 14548247 14550261 CATCCTTTAGTCTATCTGTGG 57 NA Mus musculus 50 Dsn1 ENSMUSG00000027635 ENSMUST00000103129,ENSMUST00000029163,ENSMUST00000103130 1 3 3 80 2 156822548 156823353 TGGAGTTAGTGATGGATGAG 58 156822487 156822506 TCTGGAGGTACTGAGTACTC 59 NA Mus musculus 50 Ddx20 ENSMUSG00000027905 ENSMUST00000053501 1 1 2 85 3 105482034 105485827 TCAAGCCTTGGTAGTTTCTG 59 105481968 105481986 AAGAATCGCTGTCACTCTC 59 NA Mus musculus 50 Nfkb1 ENSMUSG00000028163 ENSMUST00000029812 3 1 3 82 3 135248471 135252300 CAGCACATAGATGAACTCC 57 135248407 135248425 TCTGTAAAGCTGAGTTTGC 57 NA Mus musculus 50 1700025O08Rik ENSMUSG00000028244 ENSMUST00000029906 3 1 1 60 4 22865292 22865311 AAACTTACAACAGTCCTCCT 58 22855438 22855459 CACAAGGTACTTTCAAACTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tnc ENSMUSG00000028364 ENSMUST00000030056,ENSMUST00000107372,ENSMUST00000070019,ENSMUST00000107379,ENSMUST00000107377,ENSMUST00000107375,ENSMUST00000107374 1 7 8 80 4 63668428 63668446 GATTGGTGTTTCTGCTGTC 59 63667528 63668384 TTGGGTGCATCAATTTCTG 58 NA Mus musculus 50 Ptprd ENSMUSG00000028399 ENSMUST00000072540,ENSMUST00000098005,ENSMUST00000102834 2 3 9 82 4 75731456 75748870 CCATGCAATCAATGTTTGC 58 75731392 75731410 CTCTGGAATCTCCCAAGAC 59 NA Mus musculus 50 Slc44a1 ENSMUSG00000028412 ENSMUST00000102911,ENSMUST00000107651,ENSMUST00000107647,ENSMUST00000107645 2 4 5 65 4 53573971 53573989 AATACAATGATGGGAGCCC 59 53574018 53576025 TTTCCACAAACTCCATCAG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Ptplad2 ENSMUSG00000028497 ENSMUST00000068220 3 1 2 100 4 88065675 88065694 GTCATTTGGTACAAACTCCA 58 88044115 88065613 TTGCATTACCTATGAAGAGC 57 NA Mus musculus 50 Mier1 ENSMUSG00000028522 ENSMUST00000106858,ENSMUST00000097945,ENSMUST00000030247,ENSMUST00000106857,ENSMUST00000106856,ENSMUST00000106855 3 6 6 80 4 102828151 102828170 GCGCTATGATTTCTTTGCTC 59 102828212 102832298 TCCATGTAATCCGTTACACC 59 NA Mus musculus 50 Macf1 ENSMUSG00000028649 ENSMUST00000084301,ENSMUST00000106214,ENSMUST00000106224 2 3 12 80 4 123147110 123148262 CAGAGCAACTCAGAATGTG 58 123147048 123147068 CGTAACAGAGACAGATAGGAG 59 NA Mus musculus 50 Stil ENSMUSG00000028718 ENSMUST00000030490 1 1 2 80 4 114696957 114696975 CTGTCTCCTGATGCATACC 59 114697018 114702488 TAATAAGCGCTGGATCTGTG 59 NA Mus musculus 50 Epb4.1 ENSMUSG00000028906 ENSMUST00000105975,ENSMUST00000105970,ENSMUST00000105982 2 3 14 80 4 131562035 131562888 CAGTATAGAGACACAGCCTG 59 131561974 131561995 CAGATCATAATCGAAGCTTCAG 59 NA Mus musculus 50 Drctnnb1a ENSMUSG00000028995 ENSMUST00000101513,ENSMUST00000101515,ENSMUST00000030849 2 3 3 60 5 23505789 23505808 TGTTCACCTCAGAGATAGGA 59 23497645 23505769 TCTGGGAGTGTCTTAAATTCTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Rint1 ENSMUSG00000028999 ENSMUST00000115113,ENSMUST00000030852 3 2 2 81 5 23322667 23322685 TGTGTTTCTCGCTATTCAG 57 23322730 23322863 GCAAGGATTATTTCCTGGT 57 NA Mus musculus 50 Stx18 ENSMUSG00000029125 ENSMUST00000031008,ENSMUST00000114126 1 2 3 178 5 38496216 38497804 TCAACTCAGAACAGAAGCC 59 38498128 38507340 CAGGTTCCAGCTTAGATAGTC 59 NA Mus musculus 50 Sgcb ENSMUSG00000029156 ENSMUST00000081170,ENSMUST00000087175 3 2 2 86 5 74031974 74031992 ACCCGCTTTATAAGAGCAC 59 74031204 74031924 CTTGCTGGAAGACAATTGG 59 NA Mus musculus 50 Phf14 ENSMUSG00000029629 ENSMUST00000115511,ENSMUST00000115510,ENSMUST00000115514,ENSMUST00000090632 3 4 4 80 6 11912723 11912743 TAGAGCCTATTTCCATGTCAC 59 11912782 11936355 GGATCTGCTATATCCTCTTCTG 59 NA Mus musculus 50 Dync1i1 ENSMUSG00000029757 ENSMUST00000115556,ENSMUST00000115559,ENSMUST00000031771 3 3 5 80 6 5734485 5750779 GACTCAGAACTTGGGAGAC 59 5750823 5750841 TACTACTTCCCTAGGCAGG 59 NA Nonspecific Mus musculus 50 Rab43 ENSMUSG00000030055 ENSMUST00000078647,ENSMUST00000113625,ENSMUST00000032134 1 3 3 196 6 87744773 87761341 GTTACAGATTTGGGACACAG 58 87742823 87744614 CTGACTTGTTCCCAATCAG 58 NA Mus musculus 50 Strn4 ENSMUSG00000030374 ENSMUST00000019220 2 1 2 159 7 17416479 17416823 CTCATGAAGGTTCCTTTGG 58 17418291 17418309 CATGTCTTCTTGAAAGCGT 58 NA Mus musculus 50 Dmwd ENSMUSG00000030410 ENSMUST00000108478,ENSMUST00000032570,ENSMUST00000108479 3 3 3 85 7 19663573 19665395 TATTCAATGAAGAGCGGCT 59 19665444 19665462 AGAAGCAAGGAACAGACTC 59 NA Mus musculus 50 Tbx6 ENSMUSG00000030699 ENSMUST00000094037,ENSMUST00000073564 1 2 2 113 7 133926854 133926950 CAGAACCCTAGGATCACAC 59 133928063 133928081 AAGTTTCCTCTTCACACGG 59 NA Mus musculus 50 1500003O22Rik ENSMUSG00000030888 ENSMUST00000098148,ENSMUST00000033179 1 2 2 80 7 112882957 112883213 GACCAAACAGTTCACAATTCC 59 112882897 112882917 GTTAGGTGACATAGACTCAGG 59 NA Mus musculus 50 Uros ENSMUSG00000030979 ENSMUST00000106145,ENSMUST00000106146,ENSMUST00000033276 1 3 4 80 7 140881355 140882202 TATGAAGATCAGGGTATCCCA 59 140881295 140881313 CGCCTGAATATACTCGAGG 59 NA Mus musculus 50 Elf4 ENSMUSG00000031103 ENSMUST00000114958,ENSMUST00000033429 2 2 2 82 X 45771405 45772192 GAAGAGAAACCGAAAGACC 58 45771341 45771362 CTTTGGATTTCTTCCGTATAGG 58 NA Mus musculus 50 Irak1 ENSMUSG00000031392 ENSMUST00000114352,ENSMUST00000068286,ENSMUST00000114360,ENSMUST00000114339,ENSMUST00000033769,ENSMUST00000114354,ENSMUST00000114353,ENSMUST00000073369,ENSMUST00000101458 2 9 13 80 X 71267297 71267537 GAACAGCTATCAAGGTTTCG 58 71267236 71267254 AACAAGGCAGTATAAGCCA 58 NA Mus musculus 50 Arhgef7 ENSMUSG00000031511 ENSMUST00000033908,ENSMUST00000110909,ENSMUST00000110914,ENSMUST00000110911,ENSMUST00000110910 1 5 7 192 8 11728407 11758439 CATCGAGAAAGTCTACCCG 59 11781232 11782535 TAGTCCAATGTCTGCTGTC 58 NA Mus musculus 50 Nr3c2 ENSMUSG00000031618 ENSMUST00000034031 3 1 4 131 8 79609577 79679119 CGACAACACAACTATCTGTG 58 79679213 79709688 CTTTGACTTTCGAGCTCCT 59 NA Mus musculus 50 Jak3 ENSMUSG00000031805 ENSMUST00000051995,ENSMUST00000110013,ENSMUST00000110012 1 3 3 80 8 74204625 74204644 TTATTTCTGCAAGGAGGTGG 59 74204687 74204790 AAGTCTAACGTGATGGGTC 58 NA Nonspecific Mus musculus 50 6430548M08Rik ENSMUSG00000031824 ENSMUST00000034281,ENSMUST00000108950 2 2 4 158 8 122677859 122677877 GAAGGTTTACCTGTACACG 57 122681388 122683867 CATTTCTCCCTCTTCTCCT 57 NA Mus musculus 50 Dyx1c1 ENSMUSG00000032210 ENSMUST00000034734 1 1 2 90 9 72809940 72811908 CACAAGAGGGAGGAATTGG 59 72811962 72811980 GATTTGAATACTGCCAGCG 59 NA Mus musculus 50 Thsd4 ENSMUSG00000032289 ENSMUST00000098660 2 1 2 103 9 60223833 60223851 AAGTGGTAGAAGTATCCGG 58 60100582 60223767 GATTACCCTTTACTTCTGCA 57 NA Mus musculus 50 Eml4 ENSMUSG00000032624 ENSMUST00000096766,ENSMUST00000086525 3 2 4 184 17 83827349 83827557 TGTCATCGTCAATCAAGCA 59 83839486 83840646 GATAACCGTATACCCACTCC 59 NA Mus musculus 50 Psmf1 ENSMUSG00000032869 ENSMUST00000042452,ENSMUST00000070977,ENSMUST00000109869 2 3 3 97 2 151555256 151555274 ACTCCAGATTTCCTCACAC 58 151546563 151546581 AAGGGTCTAGGTCATCTCC 59 NA DesignNoJunction Mus musculus 50 Lmo7 ENSMUSG00000033060 ENSMUST00000100337 3 1 2 101 14 102328661 102330399 CGGAATAGGTCAGTGAGTG 59 102330463 102330482 ATGATAAGAAAGACCCAGGG 58 NA Mus musculus 50 Ptprm ENSMUSG00000033278 ENSMUST00000112708,ENSMUST00000035874,ENSMUST00000037974 3 3 4 80 17 67027391 67027409 AGAACTGTGGATGTCTTCC 58 67017010 67027347 CTTGTACTGATCCAGGAGG 58 NA Mus musculus 50 Zfp7 ENSMUSG00000033669 ENSMUST00000023179,ENSMUST00000100495 1 2 2 60 15 76722124 76722143 TTCGTACCTGATTATCCACC 58 76722163 76722184 GGCATTACATTTATAAGGCCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mrpl15 ENSMUSG00000033845 ENSMUST00000115538 3 1 2 167 1 4766875 4767619 CCCAAGAAGTCTAGAAATTCTG 58 4766729 4766747 AGTTCAAGTCTTGCTTCAG 57 NA Mus musculus 50 Bzrap1 ENSMUSG00000034156 ENSMUST00000039627,ENSMUST00000100644,ENSMUST00000107939,ENSMUST00000107936 3 4 6 90 11 87585267 87585567 CACGCTATAGCTACAACCC 59 87585617 87585639 CCATAGATGTAGATATACTCGCC 59 NA Mus musculus 50 Pla2g3 ENSMUSG00000034579 ENSMUST00000044682,ENSMUST00000064236 2 2 3 111 11 3397966 3397987 CTCATTATAGAATCCAGACTGG 57 3398058 3398241 TGCAGAAAGAACTATTGAGC 58 NA InUTR Mus musculus 50 Glis1 ENSMUSG00000034762 ENSMUST00000046005,ENSMUST00000106738 1 2 2 73 4 107304484 107304502 CTACCTACCCATCCTTCCA 59 107304874 107304892 GATGGAATGGAAACTGCCT 59 NA DesignNoJunction Mus musculus 50 Pdzrn3 ENSMUSG00000035357 ENSMUST00000075994,ENSMUST00000101117 3 2 2 100 6 101105913 101106915 TAAGTGAGATTGACCCTAACAG 59 101104260 101104278 TTCACGGTTCTGTACTTCG 59 NA Mus musculus 50 Fnip1 ENSMUSG00000035992 ENSMUST00000046835,ENSMUST00000108898 3 2 2 80 11 54314124 54314142 ACATTCCTCTCAGAGTGTG 58 54314183 54315773 CCATACAAATCTCCAAGTTGTG 59 NA Mus musculus 50 Rbm43 ENSMUSG00000036249 ENSMUST00000102768,ENSMUST00000102767,ENSMUST00000039138 1 3 3 97 2 51782260 51782278 GCACAAGACTTCATCAGAC 58 51781435 51781454 GCCATCACATAGTTGAAGAC 58 NA DesignNoJunction Mus musculus 50 Frem2 ENSMUSG00000037016 ENSMUST00000091137,ENSMUST00000108016 1 2 2 83 3 53325051 53325969 TTCGATTCCAACAGGTCAG 59 53324986 53325007 AGAGATTCTTCTTAGACAGCAG 59 NA Mus musculus 50 Kctd8 ENSMUSG00000037653 ENSMUST00000054095,ENSMUST00000087231 2 2 2 60 5 69732350 69732368 AGCATTCGACGTTACTCAG 59 69732308 69732326 CTAGAGGGTGAGAACATGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ddhd1 ENSMUSG00000037697 ENSMUST00000087320,ENSMUST00000111828,ENSMUST00000051310,ENSMUST00000045646 3 4 4 83 14 46230419 46233847 CAGGGATGAGCTAGTTAAAGG 59 46230356 46230375 TCTTCAAAGTCTGGATTCCG 59 NA Mus musculus 50 Ptger2 ENSMUSG00000037759 ENSMUST00000046891 1 1 1 60 14 45621589 45621607 GAGAACACAAGAAGCTCAG 58 45621631 45621649 AGTCTGTTTACTGGCACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Als2cr4 ENSMUSG00000038079 ENSMUST00000094917,ENSMUST00000087475 3 2 3 187 1 59172764 59174184 GCTATCCAAGACGATATTCC 57 59170942 59170960 TTCTTCTGTCTCCTTGGAG 58 NA Mus musculus 50 1810054D07Rik ENSMUSG00000038172 ENSMUST00000102823 1 1 3 97 4 82886040 82886058 CTCCCAACAGAGAAGTTCG 59 82883244 82885979 TACATCATTTCCAGGGCTG 59 NA Mus musculus 50 Galntl4 ENSMUSG00000038296 ENSMUST00000106663,ENSMUST00000049430 1 2 2 87 7 118651622 118651640 ATTTGTGTCTTGATCAGGG 57 118628700 118651571 GTGTAGTACACATTCTGGG 57 NA Mus musculus 50 Txnip ENSMUSG00000038393 ENSMUST00000074519,ENSMUST00000049093,ENSMUST00000090771 3 3 3 81 3 96363703 96363721 AGAGTGCAGAAGATCAGAC 58 96363766 96363876 GGACACTGACGTAGATCAG 59 NA Mus musculus 50 Cdc2l6 ENSMUSG00000038481 ENSMUST00000095743 2 1 2 158 10 40173875 40189400 ATAGACATCTGGGCAATAGG 58 40189521 40189702 CCAGTCTTTATCTGCAGGA 58 NA Mus musculus 50 Whrn ENSMUSG00000039137 ENSMUST00000102867,ENSMUST00000107393,ENSMUST00000063650,ENSMUST00000107388,ENSMUST00000095037 3 5 11 85 4 63092941 63092959 TTCCATGGTTTCCTACAGC 59 63080518 63092893 CTAATGTATTCCTGGCCGAG 59 NA Mus musculus 50 Runx2 ENSMUSG00000039153 ENSMUST00000113572,ENSMUST00000113571,ENSMUST00000113568 2 3 5 117 17 44776703 44776721 CCTATCTGAGCCAGATGAC 58 44747033 44776624 GTGTCATCATCTGAAATACGC 59 NA Mus musculus 50 Foxk2 ENSMUSG00000039275 ENSMUST00000106114,ENSMUST00000106113 3 2 3 107 11 121160162 121160910 AGTCAGAGTGAAAGTAGAACC 59 121160979 121160997 ATGGTCACTGTCTGAACAG 59 NA Mus musculus 50 Slc9a8 ENSMUSG00000039463 ENSMUST00000047815,ENSMUST00000109217 3 2 4 121 2 167260355 167266641 TTCTCTAGGTATTCTCATGGG 58 167268985 167269003 TAATAGGTGGGAGCAAGAG 58 NA Mus musculus 50 Nt5dc1 ENSMUSG00000039480 ENSMUST00000099973 2 1 3 156 10 34119586 34119605 ATAACTACTTTGACCTGCCG 59 34117038 34117928 ATGCCAGGTTCCTTAAAGG 59 NA Mus musculus 50 Plekhg5 ENSMUSG00000039713 ENSMUST00000105662,ENSMUST00000084115,ENSMUST00000105661 1 3 3 102 4 151486533 151486631 ATTTACAACGCACAGAACC 58 151486697 151486715 CATCTTCCTCCTCTTCCAG 58 NA Nonspecific Mus musculus 50 Timeless ENSMUSG00000039994 ENSMUST00000105244,ENSMUST00000055539,ENSMUST00000105245,ENSMUST00000105241 3 4 8 95 10 127687157 127687349 TTCTTGCATGCAGAATGGA 59 127687408 127687426 TCTTCACTTTCGTCCTCTG 58 NA Mus musculus 50 Havcr1 ENSMUSG00000040405 ENSMUST00000109224,ENSMUST00000047568 1 2 4 81 11 46569717 46569736 CATGTACCAACATCAACCAG 58 46569780 46580151 TAGTGGGTTCTGGTTTGTG 59 NA Mus musculus 50 Gm885 ENSMUSG00000040528 ENSMUST00000106794,ENSMUST00000086353 3 2 3 88 11 106616355 106622504 CACAATGGCCAAAGATGAG 59 106622553 106622574 CTAGGACTATTACCAGTATCCC 58 NA Mus musculus 50 Ckap5 ENSMUSG00000040549 ENSMUST00000099716,ENSMUST00000111337 3 2 4 95 2 91441197 91441216 CACAGTAATACAGCATCCAC 58 91441273 91447610 CTGAAATAGCTGTGTCAGAG 57 NA Mus musculus 50 Ckap5 ENSMUSG00000040549 ENSMUST00000111338,ENSMUST00000046769 1 2 4 90 2 91441276 91446413 TGACACAGATTGATGAGGT 58 91446466 91446485 TGCATGAATGTTGCTATCAG 58 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000111376,ENSMUST00000111383 3 2 17 87 2 90998627 90998645 AGGACTGATCAAGACTCTG 57 90998285 90998578 CGGAACTATTACTCACTTCAG 57 NA Mus musculus 50 Elmo1 ENSMUSG00000041112 ENSMUST00000072519 1 1 2 80 13 20342978 20342996 GCTCAGGAGTTCATAAACC 57 20343039 20353441 CAACTTCTGGTATCGTTCAG 58 NA Mus musculus 50 Stx3 ENSMUSG00000041488 ENSMUST00000075304 1 1 5 80 19 11877988 11878007 TTCATGGACGAGTTCTTCTC 59 11864111 11864546 ATCTTTGGTTTCATGTGAGC 58 NA Mus musculus 50 Ddx24 ENSMUSG00000041645 ENSMUST00000044923,ENSMUST00000110001 3 2 2 109 12 104654472 104655496 TCTGCAAGACTGTGTTCTC 59 104649503 104649521 TGTAAATCTCTGAGGTGCG 59 NA Mus musculus 50 Hps4 ENSMUSG00000042328 ENSMUST00000112359,ENSMUST00000035279,ENSMUST00000112360 1 3 3 80 5 112793571 112793589 CTCATCTTACAGACCTGCC 59 112793632 112795934 CTGGGAATTCACAATCAGTC 58 NA Mus musculus 50 Serpinb6b ENSMUSG00000042842 ENSMUST00000017184 3 1 2 84 13 33066896 33069399 CAATGTCACCAAGGATGTG 58 33069444 33069465 GGATATCTCTTCCACATAGGTC 59 NA Mus musculus 50 3222402P14Rik ENSMUSG00000043154 ENSMUST00000075941 2 1 3 105 9 101010287 101027363 CTCCAAGAAGGATTTGAAGAC 58 101010202 101010220 CACATTTCTCTGAAAGGCT 57 NA Mus musculus 50 4732471D19Rik ENSMUSG00000043183 ENSMUST00000058174 3 1 2 80 13 54629896 54630518 CAGTATGAACCATTACAGCTG 58 54630560 54630578 CTCCATGACATAGGTGAGC 59 NA Mus musculus 50 AU042671 ENSMUSG00000043679 ENSMUST00000055859 1 1 2 98 5 121775217 121775236 GTAGAGATGCAGTGTGAGAG 59 121775297 121778105 GATCTCTTTGGGCTGTCTC 59 NA Mus musculus 50 Il20rb ENSMUSG00000044244 ENSMUST00000098458,ENSMUST00000112879 3 2 3 112 9 100361870 100361889 GTTGTACTACTCTCCGTCTG 59 100359629 100359647 CTGATCAGCTTCTGAGACG 59 NA DesignNoJunction Mus musculus 50 Ush1g ENSMUSG00000044788 ENSMUST00000056153,ENSMUST00000100232 1 2 2 83 11 115146790 115147439 AGCTCTTGAGCATTTGAGG 59 115146725 115146743 TACTGAGAGTAAAGGCCCA 59 NA Mus musculus 50 Suv420h1 ENSMUSG00000045098 ENSMUST00000113973,ENSMUST00000113972,ENSMUST00000113974,ENSMUST00000052699,ENSMUST00000113977,ENSMUST00000005518 1 6 9 162 19 3807269 3807288 CTGCTCCTGTTATCAATAGC 58 3807412 3814124 CGATTAGAAGTTGCATTGTC 57 NA Mus musculus 50 4921515J06Rik ENSMUSG00000045662 ENSMUST00000059946,ENSMUST00000098680,ENSMUST00000106586,ENSMUST00000106585 2 4 4 60 3 108760691 108760709 GCAGAATGGAGTTTCAGAC 58 108761480 108761498 TCCACACGGTAATTGTAGC 59 NA DesignNoJunction Mus musculus 50 BC049762 ENSMUSG00000045942 ENSMUST00000109118,ENSMUST00000054226,ENSMUST00000065950 2 3 3 104 11 51067908 51067926 TTTCTCCTTATGCTGAGGC 59 51067516 51067534 CAGAAAGTGGAGGGTTACC 59 NA DesignNoJunction Mus musculus 50 Kcnrg ENSMUSG00000046168 ENSMUST00000051184 3 1 1 60 14 62226712 62226730 CTTCTTCAGAGTGTTTGGC 58 62226754 62226772 TGTAATCCTCCCACTTAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 2410166I05Rik ENSMUSG00000046671 ENSMUST00000102550,ENSMUST00000116279 2 2 3 181 4 134086336 134086355 ATTGTCATGCAACGTAATGC 59 134085310 134086192 GTTAATGAAGCCGAAGCTG 59 NA Mus musculus 50 Mapk10 ENSMUSG00000046709 ENSMUST00000056348,ENSMUST00000086854 2 2 7 99 5 103395638 103405383 GGCACTGATCATATTGACCA 59 103395558 103395576 CGTAGTTTCTGACTGTGGG 59 NA Mus musculus 50 Zbtb44 ENSMUSG00000047412 ENSMUST00000061588 1 1 3 148 9 30869697 30871769 GATGACGATGACAGATTGGA 59 30871880 30871898 TTCTGAATACGGGTGAAGC 59 NA Mus musculus 50 Mbd3l2 ENSMUSG00000047508 ENSMUST00000051008 2 1 1 60 9 18249176 18249196 CCTGTAGAAAGAATTGCACTG 59 18249218 18249236 CCTTAACACCACTTTGGTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pdha2 ENSMUSG00000047674 ENSMUST00000057860 1 1 1 60 3 140873637 140873655 AGTTTGCTACGACTGATCC 59 140873595 140873613 TGGTGGTAGAGGTAATTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 D19Wsu162e ENSMUSG00000047731 ENSMUST00000099376,ENSMUST00000111856,ENSMUST00000111855 3 3 4 125 19 46718934 46726970 ATGAACTCTGGTGGTTCTG 59 46727058 46727077 TCAGGTTGATTTCATGTTGC 59 NA Mus musculus 50 NM_177013.3 ENSMUSG00000048022 ENSMUST00000050249 3 1 1 63 6 24904927 24904946 TGGTCTTTCTTCATGTACGG 59 24904883 24904901 AGTGAAGGTGGAAGTAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 6430537H07Rik ENSMUSG00000048029 ENSMUST00000054280 2 1 1 83 19 59021262 59021280 AATCAGTCCATCACAGAGG 58 59021327 59027639 TTCAAAGAAGGTCCTGAGC 59 NA Mus musculus 50 Zbtb8 ENSMUSG00000048485 ENSMUST00000106046,ENSMUST00000053042 1 2 2 109 4 129109564 129109583 TCAGAACGACTGGTATAGAG 57 129105770 129105788 GTTTGAGGATGCCTTTCTG 58 NA DesignNoJunction Mus musculus 50 Lemd3 ENSMUSG00000048661 ENSMUST00000053671 3 1 1 88 10 120369074 120370458 ATGTTTAGGTGTAGTGCTGG 59 120369005 120369023 CATACATCTGCCTCGTCTC 59 NA Nonspecific Mus musculus 50 Mex3d ENSMUSG00000048696 ENSMUST00000105350,ENSMUST00000099480,ENSMUST00000062946 3 3 3 104 10 79844946 79844964 AGATTGAGGCTCACATCAC 59 79844860 79844879 CTCCTAACAGGTCTAGACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Phf3 ENSMUSG00000048874 ENSMUST00000088310 3 1 2 81 1 30870848 30870869 AAGGTGAGATAGAAATCGAGAG 59 30869981 30870807 TTATTAGCTGACGGTTCCTG 59 NA Mus musculus 50 Mmp12 ENSMUSG00000049723 ENSMUST00000005950 2 1 2 82 9 7355461 7357814 CACTACTGGAGGTATGATGTG 59 7357858 7357876 TTGATTCCTGGGAAGTGTG 59 NA Mus musculus 50 Zfp668 ENSMUSG00000049728 ENSMUST00000106263,ENSMUST00000106262,ENSMUST00000106261,ENSMUST00000054415 3 4 4 193 7 135011287 135011305 CTATGCTGAGCTCAAGGAC 59 135010720 135010738 TTTGGTAAGAGCTGAGCTG 59 NA DesignNoJunction Mus musculus 50 2900016B01Rik ENSMUSG00000050873 ENSMUST00000058886 2 1 1 70 8 15026656 15026674 AGCAAGAATGTGGAGAGTG 59 15026708 15026726 CATTTGTCATCTGGAGCCT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Lax1 ENSMUSG00000051998 ENSMUST00000063620 1 1 1 63 1 135580608 135580626 CATAGCTGCCTGTATCCTG 59 135580200 135580218 TTGGAAGTAAGGAACAGGC 59 NA DesignNoJunction Mus musculus 50 Trpm3 ENSMUSG00000052387 ENSMUST00000099569 1 1 7 144 19 23000582 23052785 ATACACCAAAGTCAGCTCC 59 23052893 23052911 TTGACCAGAAGGATGTTCG 59 NA Mus musculus 50 OTTMUSG00000022410 ENSMUSG00000052439 ENSMUST00000110002,ENSMUST00000053105 3 2 2 61 8 74437120 74437139 GAAACCTTCAGGAATTTGGC 59 74437374 74437393 CCATCTTCAAGGATCCAGTC 59 NA DesignNoJunction Mus musculus 50 Rnf157 ENSMUSG00000052949 ENSMUST00000100202,ENSMUST00000021144 2 2 4 170 11 116208406 116208667 TCAGAAGGAGAGGAGACAC 59 116205576 116205595 GTTATTGTCACACTCCATGC 59 NA Mus musculus 50 Eif3k ENSMUSG00000053565 ENSMUST00000098615 2 1 3 238 7 29759629 29759647 TGGCTTTGAAGACTCTGTC 59 29757296 29757560 CAGTCTGGTTGTCAAAGTC 58 NA DesignRelaxed Mus musculus 50 Slfn5 ENSMUSG00000054404 ENSMUST00000108158,ENSMUST00000067443,ENSMUST00000108157 2 3 3 131 11 82770782 82772186 AATCAACCCAGACCTTTCC 59 82772280 82772299 AAGTAATCCTTCTGCAGGTC 59 NA Mus musculus 50 Gpr50 ENSMUSG00000056380 ENSMUST00000070449 2 1 1 60 X 68920004 68920022 GTACATTGGCACCATTGAG 58 68920043 68920064 GTTCACATAGTTGAAGATGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Commd7 ENSMUSG00000056941 ENSMUST00000071852,ENSMUST00000109782,ENSMUST00000094447 3 3 3 60 2 153447793 153447814 TAACCAGCTGATTGATATGGAG 59 153447530 153447548 CTCTAATTCACTGCTCCCA 58 NA DesignNoJunction Mus musculus 50 Skap1 ENSMUSG00000057058 ENSMUST00000100521 3 1 7 100 11 96592452 96592470 TTATTACCAGGGCCTATGG 58 96592533 96619948 GAGAATATGTTCCCTTGCTC 58 NA Mus musculus 50 Abat ENSMUSG00000057880 ENSMUST00000065987,ENSMUST00000115839,ENSMUST00000115838 3 3 3 82 16 8582877 8582895 TAACTACCTAGTGGACGTG 57 8582941 8588990 GATGGTTGTAACCTATGGG 57 NA Mus musculus 50 Abat ENSMUSG00000057880 ENSMUST00000065987,ENSMUST00000115839 2 2 3 108 16 8615996 8616014 AGTTCATCAGCAGAGTGAG 58 8616086 8618607 AGTACCACACCTTTGTTCC 59 NA Mus musculus 50 Mmel1 ENSMUSG00000058183 ENSMUST00000080559,ENSMUST00000079269,ENSMUST00000105635,ENSMUST00000105634 2 4 4 84 4 154266554 154266572 GAACGGACTTCAGAACCTC 59 154266618 154266942 GATGATCCAGAGATTCTGGTC 59 NA Mus musculus 50 Gcap14 ENSMUSG00000058690 ENSMUST00000090024 2 1 3 96 14 37709508 37709526 CTCGATGTAACTGTCAGCA 59 37703602 37709448 CAATACCCACCAGGAATCC 59 NA Mus musculus 50 Hopx ENSMUSG00000059325 ENSMUST00000081964,ENSMUST00000113453 1 2 2 93 5 77523954 77523972 CAACAAGGTCAACAAGCAC 59 77516830 77523899 CTTAAACCATTTCTGCGTCTG 59 NA Mus musculus 50 Rpl35a ENSMUSG00000060636 ENSMUST00000115079,ENSMUST00000078804,ENSMUST00000115078,ENSMUST00000115076 2 4 5 127 16 33057250 33057479 AAGTATGTCTGGAAGGCTG 58 33057570 33057588 AGAACTCCGTTTCATCTCG 59 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 Cd302 ENSMUSG00000060703 ENSMUST00000074606 3 1 2 88 2 60095143 60095161 CCAAGACAGGTGAATGGAG 59 60093138 60095093 CTTCTTGTCATATGGGATTGC 59 NA Mus musculus 50 H2-K1 ENSMUSG00000061232 ENSMUST00000025181,ENSMUST00000087189,ENSMUST00000114311 3 3 4 85 17 34136237 34136255 AGATACCTGAAGAACGGGA 59 34134460 34134479 TTATCTTCAGGTCTGCTGTG 59 NA DesignNoJunction Mus musculus 50 Hipk2 ENSMUSG00000061436 ENSMUST00000038777,ENSMUST00000101516 1 2 4 88 6 38666209 38668760 TCTGTGAGAAATGTCTCCAC 59 38666140 38666158 GGAGTGTTCTCCTTGACAC 59 NA Mus musculus 50 Kalrn ENSMUSG00000061751 ENSMUST00000076810,ENSMUST00000074924,ENSMUST00000114968,ENSMUST00000114961,ENSMUST00000089655,ENSMUST00000114960,ENSMUST00000114957 2 7 13 99 16 34314435 34332217 ACTCCATGAATGCCTATGTC 59 34314355 34314374 GAGATCTGCTTGATTTGCTG 59 NA Mus musculus 50 Ssbp3 ENSMUSG00000061887 ENSMUST00000097934 3 1 5 191 4 106682363 106699829 GTTTCTTTCAGGGTCCTCC 59 106703634 106703652 TTCTCTGCATTGATCCTCC 59 NA Mus musculus 50 Zfp26 ENSMUSG00000063108 ENSMUST00000098970,ENSMUST00000056684 2 2 2 84 9 20244689 20244708 TTTAAACCCAGCCTGATCTC 59 20244037 20244642 GCATTTCCCATTCTTGGAG 58 NA Mus musculus 50 Olfr612 ENSMUSG00000066264 ENSMUST00000104879,ENSMUST00000084807 2 2 2 60 7 110687331 110687350 CACTATCACTCCATTCTCAC 57 110687290 110687308 GTACAACAATAGCCAAGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp575 ENSMUSG00000066721 ENSMUST00000094705 3 1 1 77 7 25372209 25372227 CAGAGATGCGATTTAGCGA 59 25371810 25371828 CAAGTTCATGGAGACAGGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Hdac8 ENSMUSG00000067567 ENSMUST00000113616 1 1 2 80 X 99623503 99623522 GTACTACAGTGTCAATGTGC 58 99604293 99623460 GTGAAACAGGCTCTTTCAC 58 NA Mus musculus 50 D430041D05Rik ENSMUSG00000068373 ENSMUST00000089726 2 1 2 84 2 104095718 104098329 ACATGTCAGTGGAAACCTC 59 104095652 104095670 CTCAGAAACAATGTGGTGG 58 NA Mus musculus 50 Gm606 ENSMUSG00000068428 ENSMUST00000115298,ENSMUST00000089832 2 2 2 86 16 26963084 26963977 ATAAACAGCTCCAGGATACTC 58 26963018 26963036 TCAGGTATTGTCTGAGGTG 58 NA Mus musculus 50 OTTMUSG00000003605 ENSMUSG00000069609 ENSMUST00000106578,ENSMUST00000092460,ENSMUST00000100240,ENSMUST00000100239 2 4 4 60 11 114875077 114875096 GACAGACTTCATCTTCACAG 57 114875036 114875054 GTAAATGTCAGCATCGCTC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Dtnb ENSMUSG00000071454 ENSMUST00000077930 2 1 3 188 12 3751892 3772590 GATGAAGTTGCTAAAGGCTC 58 3772741 3773563 TTTCTCCTCGTACCTTGTG 58 NA Mus musculus 50 EG545253 ENSMUSG00000073575 ENSMUST00000115580,ENSMUST00000097594 3 2 2 151 18 39093476 39093494 CTCACTCAGGTATGTGGTC 59 39093608 39129209 CCAGTAATCCTTGCTTTCTG 58 NA Mus musculus 50 Bglap-rs1 ENSMUSG00000074489 ENSMUST00000107543,ENSMUST00000107542 3 2 3 182 3 88173522 88174059 TCAATGACGGAATCAGAGG 59 88173071 88173232 AAGGCTTTGTCAGACTCAG 59 NA InUTR Mus musculus 50 Olfr32 ENSMUSG00000075066 ENSMUST00000099755,ENSMUST00000111505 3 2 2 60 2 89979094 89979113 ATTACTTGTCCTTGGTGGAG 59 89979053 89979072 TCAGTGATGAACTTAGGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 A930003A15Rik ENSMUSG00000075330 ENSMUST00000100083 3 1 1 60 16 19883867 19883886 ATACTCACCATACATGGTGG 58 19883826 19883844 GAAACGATGATAGGCCCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rc3h2 ENSMUSG00000075376 ENSMUST00000112934 1 1 3 98 2 37232250 37232268 CAGTTGCTCAATGGAACAG 59 37230938 37232188 TTTGCTCCTCCCTAAACTC 58 NA Mus musculus 50 2810021G02Rik ENSMUSG00000078861 ENSMUST00000108924 2 1 2 93 2 177804532 177804551 CCTATAGGAATCTCACAGCT 57 177803097 177804269 ATTTCATGCCTTCCATGAC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 A2ARV8_MOUSE ENSMUSG00000078872 ENSMUST00000108970,ENSMUST00000108969,ENSMUST00000108968 1 3 3 138 2 176859063 176868968 GGATTTAGTCACCTATGATGAC 58 176869064 176869291 CCAAATGTAACCTATAGCTGTG 58 NA Nonspecific Mus musculus 50 0610010B08Rik ENSMUSG00000078881 ENSMUST00000108994 3 1 3 131 2 176279075 176280771 ACTTTAGAACATGCAGTGG 57 176280865 176280884 AAACCTCATGTTCCTTACAG 57 NA Nonspecific Mus musculus 50 Etohi1 ENSMUSG00000078882 ENSMUST00000108998,ENSMUST00000108996,ENSMUST00000108995 2 3 4 60 2 176321593 176321612 TCTCTACAAAGGTGTGATGG 59 176321347 176321571 CCAACTGTAACCTATAGCTG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Ifrg15 ENSMUSG00000079252 ENSMUST00000111754,ENSMUST00000097526 3 2 3 90 1 157888246 157888264 GGCACAAACAGAAATCGAG 59 157898477 157898495 TTTATCTGGACCCAGTCAC 58 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Smurf2 ENSMUSG00000075472 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 NP_001078960.1 ENSMUSG00000078554 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Acvrl1 ENSMUSG00000000530 ENSMUST00000000542 3 1 1 105 15 100967552 100967803 AACATCCTAGGCTTCATCG 59 100967872 100967890 GCAGAAAGTCATAGAGGGA 58 NA Mus musculus 50 Myg1 ENSMUSG00000001285 ENSMUST00000001331 1 1 1 80 15 102167647 102167773 GATTCAAGGTAGATTCAAGTGG 58 102167813 102167832 CTAGGTGGTATAGATGCTCC 58 NA Mus musculus 50 Jup ENSMUSG00000001552 ENSMUST00000001592,ENSMUST00000107403 3 2 2 166 11 100239540 100239559 CAAAGATGACATCACAGAGC 58 100238303 100239411 CAATAGTTGCCTTGACCAG 58 NA Mus musculus 50 Coasy ENSMUSG00000001755 ENSMUST00000001806 1 1 2 90 11 100944939 100944957 CACAAAGTGTTGCTCAGTG 59 100945011 100945638 GCAACTTGCTCTTCAACAG 59 NA Mus musculus 50 Coasy ENSMUSG00000001755 ENSMUST00000001806,ENSMUST00000107308 2 2 2 96 11 100946500 100946604 CCTTTGGAACAGATATTCTCC 58 100946851 100946869 GTGAGGATCTTCATCTGCT 58 NA Mus musculus 50 Pwp1 ENSMUSG00000001785 ENSMUST00000001836 2 1 1 80 10 85337365 85339047 AGAGGATAACCCAGATGCT 59 85339089 85339109 TATGGATCCTGGTCATTACTG 58 NA Mus musculus 50 Inmt ENSMUSG00000003477 ENSMUST00000003569 3 1 1 267 6 55123482 55124833 ACCTTCTCTACAGGAGGTG 59 55121225 55121243 GAGTGACTGTCCTTCTGAG 59 NA DesignNoJunction Mus musculus 50 Fancl ENSMUSG00000004018 ENSMUST00000004120,ENSMUST00000109509 1 2 2 80 11 26368870 26369660 CTTGGAAGAATCTGACTTTAGC 59 26369701 26369719 CACACTTGATCAGGAATGG 58 NA Mus musculus 50 Bid ENSMUSG00000004446 ENSMUST00000004560 2 1 1 134 6 120847366 120850181 AGAGCCAGATTCTGAAAGTC 59 120847251 120847269 CTGCCATTCATGAACTGTG 59 NA Mus musculus 50 Zp3 ENSMUSG00000004948 ENSMUST00000005073 2 1 1 84 5 136463202 136463345 CAAGACTTCCCAGAGTTGG 59 136463391 136463411 GCTTGAATTACTACAGTTGCC 59 NA Mus musculus 50 Cadm3 ENSMUSG00000005338 ENSMUST00000111220 2 1 1 76 1 175268197 175268215 TTTCATTGTCTTCCTGCTG 57 175267259 175268157 TCAGGTAGGTTCCTTTGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Mcm5 ENSMUSG00000005410 ENSMUST00000005545 3 1 1 83 8 77638210 77639759 ATTGTGACAGGTACCTGTG 59 77639806 77639824 AGCCAAACTTCTTGATGGA 59 NA Mus musculus 50 Gpr108 ENSMUSG00000005823 ENSMUST00000005975 3 1 1 80 17 57377504 57377523 CTCTACCTGATCATGTCTGC 59 57377340 57377462 GACACTGTATGTGTTCTTGC 59 NA Mus musculus 50 Med8 ENSMUSG00000006392 ENSMUST00000084319,ENSMUST00000073881,ENSMUST00000019229,ENSMUST00000106384 1 4 4 96 4 118084324 118084342 TTAAAGCATGAGAAGACGC 58 118084402 118084969 CTTCAGTTTGACGCATGAG 59 NA Mus musculus 50 Atp1a2 ENSMUSG00000007097 ENSMUST00000085913 2 1 1 60 1 174206137 174206266 GATGTACCCACTCAAGGTC 59 174206095 174206114 GAAGATGAGGAGACTGTAGG 58 NA DesignRelaxed Mus musculus 50 Fgfrl1 ENSMUSG00000008090 ENSMUST00000013633,ENSMUST00000112560 2 2 2 118 5 109134576 109134838 CTCACTGTATTACCAGACCC 59 109134919 109134937 CCTAGGATGAAGACAGCAC 59 NA Mus musculus 50 Rnf151 ENSMUSG00000008482 ENSMUST00000008626 1 1 1 63 17 24854050 24854068 GAGAAAGATGGTCGAAGTG 57 24853649 24854023 CTTGCACTTGACTTGTAGG 58 NA DesignNoJunction Mus musculus 50 Thg1l ENSMUSG00000011254 ENSMUST00000011398,ENSMUST00000109254,ENSMUST00000101318 1 3 3 80 11 45766284 45766302 GGAGAGTCGTGTTGTATCC 59 45765119 45766243 GATTATTGATGTGACAGTCTGC 59 NA Mus musculus 50 Adam28 ENSMUSG00000014725 ENSMUST00000111072,ENSMUST00000022642 1 2 3 80 14 69229057 69235760 CCACAGTCTTCCACTTCTC 59 69228995 69229014 GGATCACTATAGCAACCACC 59 NA Mus musculus 50 Mrpl32 ENSMUSG00000015672 ENSMUST00000015816 1 1 1 108 13 14703710 14703728 TGTAGGAGAAGAAACCCTC 57 14702938 14702959 CATAGCAATATCCACAAAGGAC 59 NA DesignNoJunction Mus musculus 50 Vps45 ENSMUSG00000015747 ENSMUST00000015891 1 1 1 80 3 95846283 95846302 ATCTCATGGAAGACTTCCAG 58 95845419 95846240 CAACAAAGGCCTTCATGTC 59 NA Mus musculus 50 Cntnap1 ENSMUSG00000017167 ENSMUST00000103109 1 1 1 81 11 101046535 101046553 AGCGATACAGCTACTACAC 58 101046597 101047838 AAGAATCCACCAATATCGTG 57 NA Mus musculus 50 Mfng ENSMUSG00000018169 ENSMUST00000018313 1 1 1 137 15 78597601 78603448 GACATTCATCTTCACTGACAG 58 78597263 78597281 AAGAAGGCATCGAACTCTG 59 NA DesignNoJunction Mus musculus 50 Cog1 ENSMUSG00000018661 ENSMUST00000106623,ENSMUST00000018805,ENSMUST00000063776 2 3 3 80 11 113522354 113522459 CCAGTCAGATCAGGTTTGG 59 113522503 113522521 TTTCAACGCTTCTACTGGT 59 NA Mus musculus 50 Gopc ENSMUSG00000019861 ENSMUST00000105475,ENSMUST00000020008 1 2 2 81 10 52073182 52073200 AAACTGTCATCAGAGCCTG 59 52070489 52073137 AAAGAGTCTTGATCGTGGC 59 NA Mus musculus 50 Rtn4ip1 ENSMUSG00000019864 ENSMUST00000054418 2 1 1 97 10 43629772 43630607 TGGGAATGAGGTTTCACAC 59 43630668 43630686 CCTTGTTTATGGCAGACCA 59 NA Mus musculus 50 Lgr5 ENSMUSG00000020140 ENSMUST00000020350,ENSMUST00000105272 1 2 2 80 10 114907683 114909034 CCTTAAGGAACTAGGATTCCA 58 114907623 114907641 GTGATAAGAGAAGGGTTGC 57 NA Mus musculus 50 Glipr1l2 ENSMUSG00000020214 ENSMUST00000020434 3 1 1 89 10 111543892 111544004 AGCTACATACTACCAGTTCTG 58 111544052 111544073 CTCAGGAAGAGGATAAATATGC 58 NA Mus musculus 50 Dip2a ENSMUSG00000020231 ENSMUST00000105417,ENSMUST00000036033 2 2 2 84 10 75748390 75749116 TATCGGACCTGATAACCTG 57 75748324 75748342 GTCATCTGCATTGTGTCTG 58 NA Mus musculus 50 Fzr1 ENSMUSG00000020235 ENSMUST00000020457 3 1 1 117 10 80833532 80833550 ACTGCTGAAGAATGAGCTG 59 80833284 80833452 GAGGGAATACGTAAAGAGCC 59 NA Mus musculus 50 Col6a2 ENSMUSG00000020241 ENSMUST00000001181 2 1 1 81 10 76066220 76066238 CATCGATGACATGGAAGAC 57 76059546 76066081 CACATAGAGCTCTGTTTGG 57 NA Mus musculus 50 Hcfc2 ENSMUSG00000020246 ENSMUST00000020478 1 1 1 80 10 82163743 82163764 GACTAGAATCCTAGTGTTTGGG 59 82163804 82165198 CAACGACTTGCTTGTAACTC 59 NA Mus musculus 50 Acsl6 ENSMUSG00000020333 ENSMUST00000093106,ENSMUST00000108902,ENSMUST00000000145,ENSMUST00000108904,ENSMUST00000108905,ENSMUST00000072178,ENSMUST00000101211,ENSMUST00000101213,ENSMUST00000108899,ENSMUST00000064690,ENSMUST00000094194,ENSMUST00000108900 2 12 12 93 11 54140784 54141910 CAGGCTATAGAGGACTGTG 58 54143451 54143470 TTGTACCACTTGTGAAACAC 58 NA Mus musculus 50 Gnb2l1 ENSMUSG00000020372 ENSMUST00000020640,ENSMUST00000102788 1 2 2 179 11 48615264 48615283 TTATCTCCTCTGATGGTCAG 57 48615863 48615881 TTATGGTCTTGTCTCGGGA 59 NA DesignNoJunction Mus musculus 50 Rsad2 ENSMUSG00000020641 ENSMUST00000020970 1 1 1 90 12 27132038 27133455 ACCAGAAGATGAAAGACTCC 59 27130386 27130404 ATAGACTTGGAAGGGTCCT 59 NA Mus musculus 50 Tsen54 ENSMUSG00000020781 ENSMUST00000021134,ENSMUST00000106480 3 2 3 92 11 115683421 115683907 CATTAGTGGGTTTGATGACC 58 115683962 115683980 ACTAGAGCAAAGATCAGGG 58 NA Mus musculus 50 Mxra7 ENSMUSG00000020814 ENSMUST00000047715,ENSMUST00000106374 2 2 3 158 11 116677540 116689044 AGGATGAAGACTCAGACAG 57 116672177 116673250 CAATCCTGTGTTCCTCCTC 59 NA DesignNoJunction Mus musculus 50 Otub2 ENSMUSG00000021203 ENSMUST00000021620 2 1 1 60 12 104641587 104641608 CTTCCGACATTTCATTGATGAG 59 104641629 104642444 CTCTACTTCGTGAGTGCAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Ryr2 ENSMUSG00000021313 ENSMUST00000021750 1 1 1 80 13 11677801 11679497 TACTACTGCTTGAAAGTCCC 59 11677740 11677759 ATAAAGTCCGTCAAACTCCA 58 NA Mus musculus 50 Slc35b3 ENSMUSG00000021432 ENSMUST00000021870 2 1 1 80 13 39029212 39029623 GTTCAAAGAACCCTGTTGG 58 39029150 39029168 CCAGAACAAAGGAGATCCC 59 NA Mus musculus 50 Syk ENSMUSG00000021457 ENSMUST00000055087 2 1 1 80 13 52737304 52737322 GTAAGAGTGACGTCTGGAG 59 52737366 52738418 CTTTCATCCCTCTGTAGGG 58 NA Mus musculus 50 Ptch1 ENSMUSG00000021466 ENSMUST00000021921 2 1 1 80 13 63643518 63643538 CACATCAACTGGAATGAAGAC 59 63642582 63643476 ACTTTGATGAACCACCTCC 59 NA Mus musculus 50 Slc6a18 ENSMUSG00000021612 ENSMUST00000022105,ENSMUST00000109680,ENSMUST00000109679 3 3 3 80 13 73805723 73807381 CTGGACAGAAATATCTTGAGC 58 73805663 73805681 GACAGATGGGTACTCATCC 58 NA Mus musculus 50 Ngly1 ENSMUSG00000021785 ENSMUST00000112619,ENSMUST00000022310 3 2 2 81 14 17114392 17115890 AAGATGAGGTAGTTGATGTCAC 59 17115930 17115950 TCTTCTTTAACCTTGGTCCTC 59 NA Mus musculus 50 Rgr ENSMUSG00000021804 ENSMUST00000022338 3 1 1 90 14 37851547 37852052 AAACTACAGATGGTGCCTG 59 37851475 37851493 CTCTACAGACCATCTCCCT 59 NA Mus musculus 50 Ktn1 ENSMUSG00000021843 ENSMUST00000089901,ENSMUST00000022391,ENSMUST00000111745,ENSMUST00000111744,ENSMUST00000111743,ENSMUST00000070762 1 6 6 80 14 48320771 48320791 GACTGTGGAAGAATTACTGGA 59 48320831 48321366 TTCTCTGTTCTTATGGCACTC 59 NA Mus musculus 50 Entpd4 ENSMUSG00000022066 ENSMUST00000064846 1 1 2 110 14 69967320 69967811 TTTCAAAGAGGTAACTCACG 57 69967884 69967902 CTACAGCCATATGTTCCTG 57 NA Mus musculus 50 Xpo7 ENSMUSG00000022100 ENSMUST00000022696 1 1 1 80 14 71084734 71085241 GAAATCCTCAAAGCTGTACC 58 71084673 71084691 CCTATGAAGACACTCAGCA 58 NA Mus musculus 50 Npr3 ENSMUSG00000022206 ENSMUST00000066529 3 1 1 89 15 11813113 11813131 CGTGAAACCTGAGTTTGAG 58 11788497 11813061 AACATGTTCACGTAATCCTC 57 NA Mus musculus 50 Ppara ENSMUSG00000022383 ENSMUST00000109423,ENSMUST00000109422,ENSMUST00000057979 2 3 3 116 15 85619443 85619461 TGTACGACAAGTGTGATCG 59 85619541 85621281 CAAAGCGAATTGCATTGTG 58 NA Mus musculus 50 Bbx ENSMUSG00000022641 ENSMUST00000089404,ENSMUST00000089399,ENSMUST00000114489,ENSMUST00000066037,ENSMUST00000023317,ENSMUST00000114488,ENSMUST00000114477 3 7 7 81 16 50241043 50247910 GTTTCAGTTTGCAGAGATCTC 59 50240982 50241000 GAGTGCAGAATTTCCACAG 58 NA Mus musculus 50 Gbe1 ENSMUSG00000022707 ENSMUST00000023393 3 1 2 180 16 70314539 70361122 AGGTATAAGAAGTTTAGCCAGG 59 70361263 70401987 TCCAACCACTGAATTCTCC 59 NA Mus musculus 50 Psg29 ENSMUSG00000023159 ENSMUST00000075934 2 1 1 93 7 17794181 17795691 GAACTCCAAGTTAACAACCC 58 17795747 17795765 CTTCAGCAACATATCGAGG 57 NA Mus musculus 50 Fkbp5 ENSMUSG00000024222 ENSMUST00000079413,ENSMUST00000114792,ENSMUST00000062167 3 3 3 82 17 28566213 28566231 GAATATGCTTATGGCTCGG 58 28565395 28566168 AAATCAAGGAGCTCAATCTC 57 NA Mus musculus 50 Tnf ENSMUSG00000024401 ENSMUST00000025263 1 1 1 106 17 35338624 35338642 CTGTCTACTGAACTTCGGG 59 35337842 35338039 AAGATGATCTGAGTGTGAGG 58 NA Mus musculus 50 Dcp2 ENSMUSG00000024472 ENSMUST00000025350 2 1 1 80 18 44565154 44565172 ATGACATGACTCCCAAGTC 58 44565214 44565317 CCCTTAGTGGTCTGATAAAGG 59 NA Mus musculus 50 D18Ertd653e ENSMUSG00000024544 ENSMUST00000063775,ENSMUST00000025426 2 2 2 139 18 68395387 68395405 ACCACTACAAAGTCTCCAC 58 68410269 68413671 ACACATGATCTCTGAAGCC 59 NA Mus musculus 50 Tle4 ENSMUSG00000024642 ENSMUST00000052011,ENSMUST00000087726 2 2 2 80 19 14526181 14526199 TGTAAGCACTGGAAAGGAC 59 14524318 14526137 GAGGATTCTTTGGACTGGA 58 NA Mus musculus 50 Slc15a3 ENSMUSG00000024737 ENSMUST00000025646 2 1 1 80 19 10928838 10929403 GCAGTAACTACAGGATCCC 59 10929447 10929465 GATCCTTGACAGGGATCAG 59 NA Mus musculus 50 5730596K20Rik ENSMUSG00000024759 ENSMUST00000025668 3 1 1 80 19 7595681 7596565 AAGCGTTTACATGTGAAGG 58 7596609 7596627 GACATCGGAGAAACATGAG 57 NA Mus musculus 50 Rela ENSMUSG00000024927 ENSMUST00000025867 1 1 1 134 19 5638878 5638896 AACAGTTCGAATCTCCCTG 59 5638992 5639867 TTCTGGAAGCTATGGATACTG 58 NA Mus musculus 50 Pcgf6 ENSMUSG00000025050 ENSMUST00000026032 1 1 1 80 19 47114586 47114604 CAGGAGAAGCAACTATCGG 59 47111805 47114544 TGATATCTACCTGACAAGCTG 59 NA Mus musculus 50 Rps26 ENSMUSG00000025362 ENSMUST00000026420 2 1 1 60 10 128062362 128062380 CAAGCTCTATGTCAAGCTG 58 128062320 128062339 CCTAACAACCTTGCTATGGA 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Dach2 ENSMUSG00000025592 ENSMUST00000113380,ENSMUST00000113379,ENSMUST00000113378,ENSMUST00000067219,ENSMUST00000113381,ENSMUST00000113382 1 6 6 80 X 110753570 110753588 TCTTCAGGGTAATGGAAGC 58 110753632 110818333 GAGGATTCACTTCCACCTG 59 NA Mus musculus 50 Hadha ENSMUSG00000025745 ENSMUST00000026843 3 1 1 81 5 30470828 30471784 CTGACATCAACATGCTATCC 58 30470766 30470785 TTCTCAAACATTCTCTGACC 57 NA Mus musculus 50 Casp1 ENSMUSG00000025888 ENSMUST00000027015 2 1 1 80 9 5303106 5303124 GAAATGAAGTTGCTGCTGG 59 5303167 5303554 CTCTTTCACCATCTCCAGAG 59 NA Mus musculus 50 Gls ENSMUSG00000026103 ENSMUST00000114513,ENSMUST00000114510,ENSMUST00000027273 2 3 3 60 1 52271353 52271371 TTCAGTCCTGATTTGTGGG 59 52269200 52271329 CAATAGAATGCCTTTGCCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Stk16 ENSMUSG00000026201 ENSMUST00000027401,ENSMUST00000113618 3 2 2 81 1 75208707 75209180 GCCCTTCTTCAAGAAAGGT 59 75209225 75209243 GATCTGGTCTTCAGTCAGG 59 NA Mus musculus 50 Dolpp1 ENSMUSG00000026856 ENSMUST00000028209,ENSMUST00000113612 3 2 2 67 2 30251275 30251510 ACACGATTTCATTCCTTGG 58 30251541 30251559 GATGACGTGTTTGATCAGC 59 NA DesignNoJunction Mus musculus 50 Galk2 ENSMUSG00000027207 ENSMUST00000028636,ENSMUST00000094604,ENSMUST00000110454 2 3 3 80 2 125713655 125713675 CATGTTAATAGCTGTGGAACC 59 125713714 125719100 GTACTGAAGTCTGGATACAAGG 59 NA Mus musculus 50 Mcm8 ENSMUSG00000027353 ENSMUST00000028831,ENSMUST00000066559 1 2 2 80 2 132653795 132653814 CCCTTAAAGACCTCTATGCC 59 132653857 132657397 CAGGACAGAGTGAGTTGAC 59 NA Mus musculus 50 2010106G01Rik ENSMUSG00000027366 ENSMUST00000028844,ENSMUST00000110397 2 2 2 91 2 126730799 126733852 ATCCACAATTGCCTATGCT 59 126730726 126730744 GTACCAAGTAGAGGAGAGC 58 NA Mus musculus 50 Zc3h8 ENSMUSG00000027387 ENSMUST00000028866 3 1 1 94 2 128761273 128765588 TCCCAAGAAATTTAAGCACC 58 128761198 128761218 CACTATATGGGTCATAGTCCT 57 NA Mus musculus 50 Kif3b ENSMUSG00000027475 ENSMUST00000028977 1 1 2 131 2 153143413 153146021 AAATCAAGGCCATGGAGAG 59 153146317 153146336 GGATTTCTCTTTCTCGACGT 59 NA Mus musculus 50 Gnas ENSMUSG00000027523 ENSMUST00000080493,ENSMUST00000087876,ENSMUST00000109088,ENSMUST00000087877,ENSMUST00000109089 2 5 14 60 2 174123399 174123417 TCAGGACAACACGATATCC 58 174123441 174123459 CTTCCAAAGGTTCTTGCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC006779 ENSMUSG00000027580 ENSMUST00000108831,ENSMUST00000029102,ENSMUST00000087446,ENSMUST00000094203 1 4 4 133 2 180972160 180972178 CACCACTGCTCATCTATGG 59 180971225 180972063 ATAGATGTCTGCAGCACTG 59 NA Mus musculus 50 Src ENSMUSG00000027646 ENSMUST00000109533,ENSMUST00000092576,ENSMUST00000029175,ENSMUST00000109531,ENSMUST00000109529 2 5 5 173 2 157284325 157284343 CCTGTCCTTCAAGAAAGGG 59 157288538 157288726 CCAAAGTACCACTCCTCAG 59 NA Mus musculus 50 Trpc4 ENSMUSG00000027748 ENSMUST00000108005,ENSMUST00000029311 3 2 2 84 3 54083849 54083870 GTGGAATCTAATGGACTTTGTG 59 54083914 54094961 AGCACTGTACTTTACAAACG 58 NA Mus musculus 50 Smad9 ENSMUSG00000027796 ENSMUST00000029371 1 1 1 80 3 54590230 54593113 CTATCAACACTCAGACTTCC 57 54593155 54593174 TTGTTTAGTTCGTAGTAGGC 57 NA Mus musculus 50 4930535B03Rik ENSMUSG00000028106 ENSMUST00000090791,ENSMUST00000098855,ENSMUST00000029751 2 3 3 82 3 95591301 95594034 TGCTCTAGTGAAGGATCCA 59 95591237 95591256 CTTCTGGGTACACATTTCGA 59 NA Mus musculus 50 Nsun4 ENSMUSG00000028706 ENSMUST00000030475,ENSMUST00000106509,ENSMUST00000030474 2 3 3 82 4 115712725 115712743 GAACCAAGTCCGAGTTACC 59 115708469 115712684 CATCTACTAACACCCTATCATAGG 59 NA Mus musculus 50 Aldh4a1 ENSMUSG00000028737 ENSMUST00000039818 1 1 1 85 4 139189878 139189897 ACCTCCGATATACAGTACCA 59 139190619 139191314 TTGAGCAAGGCCTTATCAG 59 NA Mus musculus 50 Epha10 ENSMUSG00000028876 ENSMUST00000106185,ENSMUST00000059343 1 2 2 243 4 124559224 124561162 GTTATCCTCCTGGACTCCA 59 124562937 124562955 CTGGTATGCTACTGCAGTC 59 NA DesignNoJunction Mus musculus 50 Ppm1g ENSMUSG00000029147 ENSMUST00000031032 1 1 1 80 5 31510433 31510452 CTGTGCCAAATATCTTCCTG 58 31510055 31510391 GCATCTTGTAAAGCCTTCTG 59 NA Mus musculus 50 D5Ertd579e ENSMUSG00000029190 ENSMUST00000066244 1 1 3 60 5 37064020 37064039 ATATCCTCAGTCTTCTGCTG 58 37063979 37063997 ATACCTACCTGTTCCTGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gnrhr ENSMUSG00000029255 ENSMUST00000031172,ENSMUST00000094654 2 2 2 61 5 86626366 86626384 AACAGTCTATGATCAGCCT 57 86614507 86626341 ATATAACTGTGGTCCTGCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Tgfbr3 ENSMUSG00000029287 ENSMUST00000031224 1 1 1 80 5 107566599 107566619 GTGATAATGGATTTCCTGGAG 58 107566087 107566557 TGCAGTTAAACACTACCAC 57 NA Mus musculus 50 Cds1 ENSMUSG00000029330 ENSMUST00000031273 1 1 1 80 5 102226051 102226069 ATGAGATCATCACCATCGG 58 102226111 102227406 GGAGGAAGTACCAACTTAGTG 59 NA Mus musculus 50 Tmem176b ENSMUSG00000029810 ENSMUST00000101429 2 1 1 153 6 48788183 48788201 CAGAATCCACTATGGGCAG 59 48785950 48786232 AGCTAGAATTGCCACAGAC 59 NA DesignRelaxed Mus musculus 50 Tuba8 ENSMUSG00000030137 ENSMUST00000032233 2 1 1 83 6 121171459 121172761 CGTAAACTGACTGATGCCT 59 121172808 121172826 AGTAAAGCCAGATCCTGTG 58 NA Mus musculus 50 Camk1 ENSMUSG00000030272 ENSMUST00000032409 2 1 1 80 6 113286214 113286235 TGGATAAGAATATCCACCAGTC 59 113284613 113286173 CATTGAAAGCTTGCTTCCA 58 NA Mus musculus 50 Necap1 ENSMUSG00000030327 ENSMUST00000032477 3 1 1 81 6 122832325 122832343 GGAAATGGATAATCGTCCC 57 122832385 122832843 GGCTGTAATATTCCCAATACTC 58 NA Mus musculus 50 Tspan9 ENSMUSG00000030352 ENSMUST00000112173,ENSMUST00000032503,ENSMUST00000112171 1 3 3 80 6 127916811 127917107 CTTCTCAGCTTCTTCATCGT 59 127916750 127916770 GTCCATGTAGACGAAGAAGAG 59 NA Mus musculus 50 Unc45a ENSMUSG00000030533 ENSMUST00000107368,ENSMUST00000032748 2 2 2 82 7 87474037 87474399 TAAGCAGGTCTGAAGAAAGG 59 87473974 87473992 CTCCTCATAGTCGTAGCTG 58 NA Mus musculus 50 1110006G06Rik ENSMUSG00000030590 ENSMUST00000032811 2 1 1 102 7 29937856 29938348 TCAACAAGGTGCTTATGGG 59 29937772 29937790 CTTCCTCCATCTTCTCGTC 59 NA Mus musculus 50 Rabep2 ENSMUSG00000030727 ENSMUST00000106407,ENSMUST00000032971,ENSMUST00000106405 2 3 3 106 7 133585499 133587655 CCATACAGGAGCTACATCTG 59 133587724 133587742 CTTCACAATTTCAATGCGC 58 NA Mus musculus 50 Gpkow ENSMUSG00000031148 ENSMUST00000049896 3 1 1 81 X 7275708 7275726 CATCCTCAGAAACTAGCAC 57 7275770 7275891 TTCTTGGATTCCTCAATGAG 57 NA Nonspecific Mus musculus 50 Lamp1 ENSMUSG00000031447 ENSMUST00000110847,ENSMUST00000033824 2 2 2 80 8 13165896 13165914 GGCACAACGTGTATAATGG 58 13165958 13167166 GTTCACGATCTGAGAACCA 59 NA Mus musculus 50 Rbm13 ENSMUSG00000031578 ENSMUST00000033983 2 1 1 80 8 32272303 32273519 GACTGAAACAAGATACGTATGG 58 32272244 32272263 CTGCTTCCTGTTTCTCTAGG 59 NA Mus musculus 50 Pcm1 ENSMUSG00000031592 ENSMUST00000045199,ENSMUST00000045218 2 2 2 80 8 42411280 42411299 ACATCCAGACTTCACTTCAG 59 42411339 42412899 CAAGATCATGTTGCAGAATCTG 59 NA Mus musculus 50 Sc4mol ENSMUSG00000031604 ENSMUST00000034015 3 1 1 80 8 67199188 67199207 GTGTGATCACGTAATTCTCC 58 67197967 67199145 ATATCATAACCGCTGTGCA 59 NA Mus musculus 50 Sap30 ENSMUSG00000031609 ENSMUST00000034022 1 1 1 92 8 59961836 59963847 CTTGTTGAGATAGTTGGTTGC 59 59961764 59961782 CTTGTCGTTCCTCACTGAG 59 NA Mus musculus 50 Irx3 ENSMUSG00000031734 ENSMUST00000095002 2 1 2 116 8 94324302 94324320 AGAGGAAGACGAGGAAGAG 59 94324198 94324221 AAATCGATCTCCTCATCTCG 59 NA Mus musculus 50 Terf2 ENSMUSG00000031921 ENSMUST00000068388,ENSMUST00000116425,ENSMUST00000095178 1 3 3 99 8 109618791 109618809 AGCTATCAATGTGCTGGAG 59 109606958 109618728 AATAATGACAGCAGCCTCC 59 NA Nonspecific Mus musculus 50 Crtam ENSMUSG00000032021 ENSMUST00000034519 3 1 1 85 9 40798286 40798304 GCTGAAATGTTCCACAGAG 58 40796017 40798238 TGAGTTCACCATAGATCTCC 58 NA Mus musculus 50 Cpne4 ENSMUSG00000032564 ENSMUST00000098443,ENSMUST00000057742,ENSMUST00000077190 2 3 3 120 9 104588925 104775016 AATGGTTTGAGGTGGACAG 59 104775100 104775118 TCATGAACTTCAAACCGGA 59 NA Mus musculus 50 Fhl3 ENSMUSG00000032643 ENSMUST00000106199,ENSMUST00000038684 2 2 2 124 4 124383021 124383133 GCATGATTCAAGGGAACTG 58 124383221 124383239 TACACAGAAGCTCACTGTC 58 NA Mus musculus 50 4933427E13Rik ENSMUSG00000033015 ENSMUST00000044347 3 1 1 82 11 25257569 25257588 TTTCTCGGGATTTAGAAGCA 59 25257633 25258170 GCCATTTATAACACTGAGCG 59 NA Mus musculus 50 Hsf4 ENSMUSG00000033249 ENSMUST00000036127 2 1 1 81 8 107798799 107798946 ATGGAGTTGTCTCTGATGC 59 107798990 107799009 CACCAGAAGAATTCAACTCC 58 NA Mus musculus 50 Qsox1 ENSMUSG00000033684 ENSMUST00000111764,ENSMUST00000035325 2 2 2 101 1 157630600 157630618 ATTCCATAAACGACTGGCT 58 157629787 157630535 CAGTAAGGACAGCATCCTC 59 NA Mus musculus 50 Adra2a ENSMUSG00000033717 ENSMUST00000036700 2 1 1 60 19 54122013 54122031 AACCCTGTTATCTACACCA 57 54122055 54122073 AGAGGATCTTCTTGAAGGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rpap2 ENSMUSG00000033773 ENSMUST00000112650,ENSMUST00000112651,ENSMUST00000112654,ENSMUST00000065422,ENSMUST00000112653,ENSMUST00000112655 3 6 6 117 5 108032601 108032619 CAAACTCTGTGGCTATCCT 58 108032895 108035932 GCAGAAAGACTTCCTTTCAG 58 NA Mus musculus 50 Tcea1 ENSMUSG00000033813 ENSMUST00000081551 3 1 1 195 1 4879676 4880833 GACAGGAGATGATTATGTTGC 58 4882107 4882126 ATCAGGAGGAATATTCCCAC 58 NA Mus musculus 50 Tpbpa ENSMUSG00000033834 ENSMUST00000021885 1 1 1 82 13 61041565 61041583 ACAAACTTCACAGTAGCGA 59 61041406 61041519 TTCATCAGTTAGCTGACCG 59 NA Mus musculus 50 Mapkbp1 ENSMUSG00000033902 ENSMUST00000102506,ENSMUST00000066058 1 2 2 80 2 119842537 119842555 GAGTGAGATGCTGAAAGTG 58 119842599 119842885 AGTTTCAAACCTGTGTCTG 57 NA Mus musculus 50 Tmem16g ENSMUSG00000034107 ENSMUST00000058682 3 1 1 81 1 95298794 95299225 TCGTATTTGAGCATGTGGT 59 95299270 95299288 TTGATCTCCACGGATTCTG 59 NA Mus musculus 50 Vav1 ENSMUSG00000034116 ENSMUST00000005889,ENSMUST00000112870,ENSMUST00000097298,ENSMUST00000008847 1 4 4 98 17 57454668 57454686 TATAACGTGGAGGTCAAGC 59 57454748 57458062 CTCTACCAGTTCCAGAAGG 58 NA Mus musculus 50 Ina ENSMUSG00000034336 ENSMUST00000037636 2 1 1 105 19 47096429 47096447 TTGAGATCGCAGCTTACAG 59 47097893 47097911 AAATAACTGGGATTGGGCA 59 NA DesignNoJunction Mus musculus 50 Csta ENSMUSG00000034362 ENSMUST00000096090 1 1 1 95 16 36122444 36125069 CTTCATTAAGATGGATGTAGGG 58 36122370 36122388 TGGTAACCAGTAAGTTCCA 57 NA Nonspecific Mus musculus 50 Dio1 ENSMUSG00000034785 ENSMUST00000082426 1 1 1 195 4 106966521 106966540 TAAGAACAACGTGGACATCC 59 106965019 106966363 AGCTTTACCCTTGTAGCAG 59 NA Mus musculus 50 Ppil5 ENSMUSG00000034883 ENSMUST00000110621 1 1 2 121 12 70270037 70272855 AACCAGCTACAAGCTAAGAG 59 70272939 70275388 CAGGATTGGCCTTACTCAG 59 NA Mus musculus 50 BC051227 ENSMUSG00000035559 ENSMUST00000038626 2 1 1 113 8 73282920 73283023 CTATCTGAAGTACTGGGTCC 58 73282826 73282844 CTTCGGTAATCTCCTGTGG 59 NA InUTR Mus musculus 50 Fbxw2 ENSMUSG00000035949 ENSMUST00000054039 1 1 8 80 2 34671605 34671624 TAAGGTGGAGCAGAAACAC 59 34671543 34671562 TCAAGTTCTAACTTGCTGGA 58 NA Mus musculus 50 Rusc2 ENSMUSG00000035969 ENSMUST00000035645,ENSMUST00000098106 1 2 2 137 4 43437084 43437102 CTACAACAAAGTCAGCCAG 58 43437809 43438181 GTCTGGATGATATCTTCATGG 57 NA Mus musculus 50 Plxnb2 ENSMUSG00000036606 ENSMUST00000109331,ENSMUST00000060808,ENSMUST00000109330 2 3 3 80 15 88993792 88994452 AGACTGTGAAGGTTTCTTCC 59 88993731 88993749 TGTCTGATTCATGCATGGT 59 NA Mus musculus 50 Tmem184a ENSMUSG00000036687 ENSMUST00000110832,ENSMUST00000044002 1 2 2 153 5 140283994 140284321 CTGCTACGAAGCATTTGTC 59 140283772 140283791 GATGGAGTAGGACATACCAC 58 NA Mus musculus 50 Klhl13 ENSMUSG00000036782 ENSMUST00000115313,ENSMUST00000035973,ENSMUST00000115319,ENSMUST00000115317,ENSMUST00000115316 2 5 5 81 X 22797975 22805717 GAGTGATGTATATTTCAGGAGG 57 22797915 22797934 CATTTGTCAGTATCAGGGTC 57 NA Mus musculus 50 Unc84a ENSMUSG00000036817 ENSMUST00000058716,ENSMUST00000110884,ENSMUST00000078690,ENSMUST00000110883,ENSMUST00000100517 3 5 5 80 5 139691201 139699559 GCACTCAGTTCTAGTTACTC 57 139699601 139699620 CCTTGGAGAGTCAAATACAG 57 NA Nonspecific Mus musculus 50 Mxd4 ENSMUSG00000037235 ENSMUST00000042701 1 1 1 80 5 34520401 34521468 GCACATCAAGAAACTGGAG 58 34520339 34520357 TTTAGGAAGCGATGTTCCC 59 NA Mus musculus 50 Slc22a20 ENSMUSG00000037451 ENSMUST00000041827 2 1 1 81 19 5981745 5982842 TCTATTCTTGGTGGCTTCC 58 5981682 5981700 TTCTGAAGGTTCTGCACAG 59 NA Mus musculus 50 2810485I05Rik ENSMUSG00000037808 ENSMUST00000059579 3 1 1 80 9 13637550 13637568 GCACCATTCTAAACACCAC 59 13637611 13640343 CTTAGACTGCTGACTTTGTG 58 NA Mus musculus 50 Cramp1l ENSMUSG00000038002 ENSMUST00000024982 3 1 2 79 17 25148343 25150622 ATCCTTGGCAGTTTCTCTG 59 25148282 25148303 CTTCTCCATAAGTCACTCTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2010209O12Rik ENSMUSG00000038181 ENSMUST00000063346 2 1 2 122 5 24095045 24097115 CTCTACTTCACAGAGCAGC 59 24097201 24097219 CAAGTCGAGGGTGTATTCC 59 NA Mus musculus 50 Ankrd35 ENSMUSG00000038354 ENSMUST00000048427 2 1 1 132 3 96484400 96484418 GCTAATGAAGATGCTGTGG 58 96484612 96484894 TGCGTCCATCATTATCCAG 59 NA Mus musculus 50 BC057079 ENSMUSG00000038368 ENSMUST00000097992,ENSMUST00000084432,ENSMUST00000107148,ENSMUST00000107147 2 4 4 81 4 88049242 88049263 TAGAACTGATGGGTTATGTGAG 59 88049305 88053027 AAGTCCAAAGCCTCTTCAG 59 NA Mus musculus 50 OTTMUSG00000007332 ENSMUSG00000038578 ENSMUST00000107544,ENSMUST00000040166 1 2 2 80 4 59342584 59345820 TGGACCTATCAGTTCATATCAG 58 59342525 59342543 GTCATGCCTTCAGAATCAC 58 NA Mus musculus 50 Herc1 ENSMUSG00000038664 ENSMUST00000043618,ENSMUST00000042824,ENSMUST00000098618 1 3 4 80 9 66236053 66236568 TCGGAAGATTAGGTCATGG 58 66236612 66236630 AAACCTCTCCTACATTGCT 58 NA Mus musculus 50 Ttll6 ENSMUSG00000038756 ENSMUST00000107681,ENSMUST00000107680,ENSMUST00000035282 2 3 3 80 11 96001022 96001040 GTGTACAATGAAGGACTGG 57 96001083 96001760 CATACAGATCTCATCCAGGT 58 NA Mus musculus 50 Pdk2 ENSMUSG00000038967 ENSMUST00000038431 3 1 1 81 11 94893832 94893850 GTATGTCCAGAGTCTGCTG 59 94893325 94893788 ATCTGTGAACTGGCTTAGAG 59 NA Mus musculus 50 Tlr4 ENSMUSG00000039005 ENSMUST00000107365 1 1 2 178 4 66488953 66494949 GAGGTAGTTCCTAATATTACCTACC 59 66495083 66585408 TTCATCTCCCTGGATAAATCC 58 NA Mus musculus 50 Tsga13 ENSMUSG00000039032 ENSMUST00000048580 2 1 1 92 6 30862266 30862284 AAGTCAGTGGATCAAAGCC 59 30858523 30862213 GTGCAGTTGTATCATACATCTC 58 NA Mus musculus 50 BC067047 ENSMUSG00000039621 ENSMUST00000036719,ENSMUST00000099080,ENSMUST00000109246 1 3 3 80 2 166397093 166398453 CTATAGAAAGCTCAGGGCG 59 166397031 166397049 TGGTCAATCTTCACAGCTG 59 NA Mus musculus 50 Heca ENSMUSG00000039879 ENSMUST00000037879 1 1 1 80 10 17634847 17634867 GATGGAACTCTGTTCTTAAGC 58 17627984 17634805 CATGAGTCTCCCTTGAAGG 59 NA Mus musculus 50 4833442J19Rik ENSMUSG00000039958 ENSMUST00000111548 1 1 4 130 6 149091226 149092563 CAGTTCAATCAGAGATCCAG 57 149092653 149092674 CATTAGTACATCTCCAAACCTC 58 NA InUTR Mus musculus 50 Gpr176 ENSMUSG00000040133 ENSMUST00000039160 1 1 1 80 2 118109690 118109709 CTCAAATTCCTACACAAGGT 57 118106078 118109648 GACTGAATAGTACCTGTCCA 58 NA Mus musculus 50 Ltbp4 ENSMUSG00000040488 ENSMUST00000038618,ENSMUST00000108369 1 2 2 80 7 28108214 28108232 CTAAAGGCTCCTTCCACTG 59 28107947 28108171 CATTTATGTCTGCACAAGGC 59 NA Mus musculus 50 Cmtm8 ENSMUSG00000041012 ENSMUST00000047013 1 1 1 61 9 114705180 114705198 GACTTACACCAGGATTCCC 59 114699851 114699869 CACTGCCATTAAAGCACAG 59 NA DesignNoJunction Mus musculus 50 Spem1 ENSMUSG00000041165 ENSMUST00000045771 1 1 1 72 11 69635118 69635308 GAAACCAGTACTTCACTTGG 58 69635065 69635083 ATCGAAGATGGACTTTGGG 59 NA DesignNoJunction Mus musculus 50 Rpl21 ENSMUSG00000041453 ENSMUST00000035983,ENSMUST00000075453,ENSMUST00000099272 1 3 3 80 5 147646075 147646575 TAGACATCAAGGGAATGGG 58 147646619 147646637 CATTGTAGACTCTTCCGGT 58 NA Nonspecific Mus musculus 50 2310015A05Rik ENSMUSG00000041617 ENSMUST00000056962 1 1 1 156 16 17646874 17647716 AGGATCTCCACTACAAGCT 59 17648918 17648936 TGTTTCTTGAAGGAGCTGG 59 NA DesignNoJunction Mus musculus 50 Slc24a4 ENSMUSG00000041771 ENSMUST00000079020 1 1 1 80 12 103492822 103492840 TCATGGTCACCTTCATCAC 59 103492882 103498603 ATCCAATAATAGTCACCAGCC 59 NA Mus musculus 50 Flg ENSMUSG00000041991 ENSMUST00000050758 1 1 7 291 3 93084152 93084170 CAAGTCCATTCTGGAGTCC 59 93088140 93088158 CTTCTGAGAAGTCGGAGTG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Zfp451 ENSMUSG00000042197 ENSMUST00000044455 1 1 3 114 1 33862256 33870582 AGTTTGTTAGTGAAGGACCG 59 33860436 33860454 GGCACTTTAGATTCAGGCA 59 NA Mus musculus 50 Adprhl2 ENSMUSG00000042558 ENSMUST00000102617 2 1 1 118 4 125995143 125995242 CAAGATGTACAGAAGTTTGCC 59 125995045 125995063 GATGATACACCCTGCAGAG 59 NA Mus musculus 50 Npl ENSMUSG00000042684 ENSMUST00000041874 1 1 1 80 1 155359720 155359739 AAAGACAAACCAGATGTTGG 58 155356265 155359679 AATCTCTGGATACGAAACTGG 59 NA Mus musculus 50 Wfdc12 ENSMUSG00000042845 ENSMUST00000051272 2 1 1 81 2 164015925 164015943 AGATCAGGAGATATGCTGC 58 164015410 164015880 AGGGATCTGTTCTTCACTG 58 NA Mus musculus 50 Plac9 ENSMUSG00000043248 ENSMUST00000052286 1 1 1 155 14 26850016 26850035 CGGTTAGACATTATGGAGGA 58 26847772 26848159 TCAGAAACCATCATCTCCA 57 NA Nonspecific Mus musculus 50 C030030A07Rik ENSMUSG00000043298 ENSMUST00000111894 3 1 2 61 6 136779753 136779773 AGTACCATCATGCTATCACTG 59 136779217 136779731 ATCTGTTCATCTTAGCTGGC 59 NA DesignNoJunction, InUTR Mus musculus 50 4930412D23Rik ENSMUSG00000043569 ENSMUST00000052500 3 1 1 60 X 124256346 124256365 AACAAGTCTGCCAATTACCA 59 124256305 124256324 ACATTATCCATGCAATGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 5730585A16Rik ENSMUSG00000043805 ENSMUST00000053475 1 1 1 60 15 102888853 102888872 AAGAAGAAAGAACAGCTTGG 58 102888812 102888830 CAGATGTGAATGGATCCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fmn1 ENSMUSG00000044042 ENSMUST00000102547,ENSMUST00000099576,ENSMUST00000081349 1 3 6 80 2 113443438 113476898 AACTAGAAGCAAGTGAGCA 58 113476942 113476960 GTTTGTCCTTGAAAGGCTG 59 NA Mus musculus 50 Otos ENSMUSG00000044055 ENSMUST00000053144 2 1 1 165 1 94541968 94541986 GAATTGCCCTTGGTAAGGA 59 94541032 94541050 AGTTCCAGAAGTCAGAGGT 59 NA DesignNoJunction, InUTR Mus musculus 50 Neurog3 ENSMUSG00000044312 ENSMUST00000050103,ENSMUST00000105449 1 2 2 79 10 61596769 61596787 TCATTGGAGGAATTCCCTG 58 61596830 61596848 AAGTCTGAGAACACCAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trp53i13 ENSMUSG00000044328 ENSMUST00000094005,ENSMUST00000060417 3 2 2 68 11 77326182 77326402 ACAGGTGTTACCAAGAGTG 59 77323206 77323224 TAGAAGAAGGCGATACCCT 59 NA DesignNoJunction Mus musculus 50 zfp507 ENSMUSG00000044452 ENSMUST00000061586 1 1 1 80 7 36576777 36578556 TCTTTCCATTACAAGAGCCA 58 36576716 36576735 ATTCGAAGCTACTGACAAGG 59 NA Mus musculus 50 4930578I07Rik ENSMUSG00000044480 ENSMUST00000052898 2 1 1 60 14 67557466 67557484 CAACCTGGATTCATAGCAC 58 67557506 67557526 TCCCAATCTGATACTAAAGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rnf208 ENSMUSG00000044628 ENSMUST00000114355,ENSMUST00000114351,ENSMUST00000060818 3 3 3 60 2 25099363 25099384 CTAAGTACAAGTTCATCTCCTG 57 25099405 25099423 TAGTCAGTGAAGAGCACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Herc4 ENSMUSG00000045391 ENSMUST00000054837 2 1 1 68 10 62705942 62705963 CGAGGTTAAATTACCCAAACTC 59 62705895 62705913 ATGAAGCAGGAACTGTAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1390 ENSMUSG00000045421 ENSMUST00000062719 2 1 1 60 11 49154502 49154521 CTCTAATTCAGACGAGCCTC 59 49154544 49154562 AAGTGGTTCAGTCGATGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Adrb2 ENSMUSG00000045730 ENSMUST00000053640 3 1 1 60 18 62338501 62338519 CGTTATCAGGGACAACCTC 59 62338459 62338477 GTAGCCCAACCAGTTAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Slc16a5 ENSMUSG00000045775 ENSMUST00000092445,ENSMUST00000106532 3 2 3 64 11 115334123 115334141 AAATGGAGAACGCTACCTC 59 115334169 115334187 ACTGTCCTTGTCTTCTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC050210 ENSMUSG00000046337 ENSMUST00000114981,ENSMUST00000057826 2 2 2 80 1 36657422 36657725 ACTACATCTACAAGTTCCTGAC 59 36657363 36657381 CCATCAGATCCAAGATGCT 59 NA Mus musculus 50 AA409316 ENSMUSG00000046761 ENSMUST00000060807 2 1 1 89 15 75835432 75835450 ACTGGGAAGTCTTTCAAGG 59 75835170 75835380 CCACATGAAGCTATAACTGC 58 NA Mus musculus 50 Irgm ENSMUSG00000046879 ENSMUST00000049519 2 1 2 83 11 48682082 48682103 CTCGGATCTTATCATGAAACCA 59 48680462 48680480 GGAGCATAATGGGTCTCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 0610025P10Rik ENSMUSG00000047284 ENSMUST00000061837,ENSMUST00000108617 1 2 2 80 11 69725076 69725247 CAGGTTCAACCTTAGGGTG 59 69725291 69725309 CTGCTTCCATGATATGCCA 59 NA Mus musculus 50 Kcnv2 ENSMUSG00000047298 ENSMUST00000056708 2 1 1 60 19 27408284 27408302 CAAAGCTTACGAGTACACC 58 27408325 27408344 TCTCTGCATAAAGTTGACCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cstad ENSMUSG00000047363 ENSMUST00000102853 3 1 1 60 2 30463779 30463798 ATGTACGTTAAGGAGTTGGG 59 30463820 30463839 CCTTCCAGTACAGAATTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2810006K23Rik ENSMUSG00000047635 ENSMUST00000077376 1 1 2 63 5 124788902 124788920 TTGTGTAGTGCTCAAACAC 58 124790620 124790638 CACAGATCTTGTTTGGTGG 58 NA DesignNoJunction Mus musculus 50 Rfwd2 ENSMUSG00000048949 ENSMUST00000087891 1 1 1 138 X 100358536 100358554 TGAATTTGTCAGTGCTGTG 58 100358416 100358435 AGGATCAAACTCAGTTTGAC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Olfr1257 ENSMUSG00000049057 ENSMUST00000111519 2 1 2 118 2 89719589 89719607 ACCAGGATTCTAAACTGGA 57 89719687 89720973 GATGGCTGGTTATATCATCTC 57 NA InUTR Mus musculus 50 Sephs2 ENSMUSG00000049091 ENSMUST00000082428 3 1 1 60 7 134416581 134416599 AAGATGGTGGTTTCCAGAG 59 134416539 134416560 CCATATTGAACATAGCTTCCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gpr55 ENSMUSG00000049608 ENSMUST00000086975 3 1 1 63 1 87837627 87837645 GCTTTATCTTGGACTGCAG 58 87837582 87837600 AAACACAGAGACAACTGCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Trex1 ENSMUSG00000049734 ENSMUST00000112054 1 1 3 80 9 108974282 108974300 TCACATTTCCTTCTTGAGC 57 108971900 108974238 CAGTGATTGGAGCTTTCTG 58 NA Nonspecific, InUTR Mus musculus 50 Olfr642 ENSMUSG00000049797 ENSMUST00000052660 3 1 1 60 7 111198142 111198161 AGGCTTAAGACACTCAACAC 59 111198101 111198121 GTACATAGAAGATGAGCACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Lrrc4 ENSMUSG00000049939 ENSMUST00000062304 2 1 1 60 6 28779707 28779726 TCACCACTATCTCTGAACCT 59 28779666 28779684 GTTTCCTGTACCTTGTCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nsun3 ENSMUSG00000050312 ENSMUST00000063089 3 1 1 80 16 62769480 62769499 CTCAGAAAGCTGCCTATAGG 59 62735231 62769440 CTTTAATTGCAGACCTTACGAG 59 NA Mus musculus 50 Krt78 ENSMUSG00000050463 ENSMUST00000062260 2 1 1 80 15 101782261 101782670 TCCTTAAGAAGGACGTGGA 59 101782199 101782218 AGACGTGTTCTTTCAGAGAC 59 NA Mus musculus 50 Olfr958 ENSMUSG00000050853 ENSMUST00000062545 3 1 1 60 9 39358335 39358353 CTATGCCTGTACCCTAGTG 58 39358293 39358312 GCGAGTTGAGGAAATAACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 BC072620 ENSMUSG00000051067 ENSMUST00000053986 3 1 1 73 10 80297132 80297150 TATTCCTTCCGTAAGGTGG 58 80297077 80297096 ATCTTCATGTTGAACTTGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Irf2bp2 ENSMUSG00000051495 ENSMUST00000054960 2 1 1 87 8 129115720 129116349 TCTAAAGCAGTTGCAAGGA 59 129115651 129115670 TCTCACCATTGATCTTAGGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 B3gnt2 ENSMUSG00000051650 ENSMUST00000062844,ENSMUST00000055549 2 2 2 60 11 22736498 22736516 AAGTGCTGTTTCTTAGGTG 57 22736456 22736474 CCCTTGAAGACAAACTCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Dnahc6 ENSMUSG00000052861 ENSMUST00000114040,ENSMUST00000064948 3 2 2 84 6 72985416 72987552 ACGCAATTATTCAGGAGAG 57 72985350 72985369 GCACATTCTCTATCACTGTC 58 NA Mus musculus 50 Trim60 ENSMUSG00000053490 ENSMUST00000048565 1 1 1 60 8 67524823 67524843 TATCTTGAGACCCTGTTAGAC 58 67524783 67524801 CCTCCACTTCCTTCAACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Klf1 ENSMUSG00000054191 ENSMUST00000067060 3 1 1 261 8 87427295 87427313 AACTTTGGCACCTAAGAGG 59 87428799 87428817 CAGAGCTAAGTGGTCAGAG 59 NA DesignNoJunction Mus musculus 50 Magea2 ENSMUSG00000055746 ENSMUST00000069477 1 1 2 82 X 151467051 151467069 TTGTGGACTTGAACTAGGC 59 151464208 151467006 GATACCAGGGACCTAAACTG 59 NA Nonspecific, InUTR Mus musculus 50 Aasdh ENSMUSG00000055923 ENSMUST00000069709 2 1 1 81 5 77317670 77317690 ATGGTATCACAGAGGTATCCA 59 77317153 77317627 GATTCATGTTTCACGGCAG 59 NA Mus musculus 50 OTTMUSG00000004461 ENSMUSG00000055963 ENSMUST00000069775 3 1 1 100 4 12901951 12907559 ATAGGCATAAAGGAAGTTGG 57 12907621 12907640 GAGTCAATATTCGTGGACAG 58 NA InUTR Mus musculus 50 Tas2r134 ENSMUSG00000056115 ENSMUST00000070028 2 1 1 60 2 51483572 51483590 GGGTCATTCCATTCTTCCT 58 51483613 51483632 CGATACAGTGAGAACATGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Med12l ENSMUSG00000056476 ENSMUST00000040325 3 1 2 80 3 58897556 58897575 TCCCATCAAATTACGACCTC 59 58897615 59031623 CATGACTTGAAGATTCATCCAG 59 NA Mus musculus 50 Cngb3 ENSMUSG00000056494 ENSMUST00000070627,ENSMUST00000102999 1 2 2 80 4 19323128 19323836 ATGTCTACAGAGTCATCCGA 59 19323877 19323897 CTGAAGCCCAGTAATAAACAC 58 NA Mus musculus 50 2810410L24Rik ENSMUSG00000056649 ENSMUST00000070897 3 1 1 88 11 120047474 120047492 CTTGACTACCAGATGGGAG 58 120047543 120047562 TTTCTGCCTGGAAGTTTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 St8sia3 ENSMUSG00000056812 ENSMUST00000025477,ENSMUST00000074935 1 2 2 89 18 64429627 64431175 CATGTCAACAGGTACTGGA 58 64431227 64431246 ACATATTGCAGATGCAAGAG 58 NA Mus musculus 50 Jmjd6 ENSMUSG00000056962 ENSMUST00000047616 1 1 1 90 11 116703707 116703725 TTGGAAGACTACAAGGTGC 59 116702659 116703653 TCACAAACCACCTGTAAGG 59 NA Mus musculus 50 A830018L16Rik ENSMUSG00000057715 ENSMUST00000048613 1 1 1 80 1 11788581 11788600 ATGGAAAGAACAGAAGACAC 57 11788640 11819909 CCCAGGTAAAGAATCTAATGAG 57 NA Mus musculus 50 A830018L16Rik ENSMUSG00000057715 ENSMUST00000048613 3 1 1 80 1 11535296 11535315 TGATGAATTGAACCACATCC 58 11535358 11553056 GAAATCGCGATACTTCGAG 58 NA Mus musculus 50 Phf21a ENSMUSG00000058318 ENSMUST00000090586,ENSMUST00000111297,ENSMUST00000111294,ENSMUST00000111293 1 4 9 82 2 92160601 92167074 TCTAACTGCATCACAGAAGAC 59 92167118 92167136 CAGTTGCTGCTTTCAAGAC 59 NA Mus musculus 50 C1qtnf3 ENSMUSG00000058914 ENSMUST00000022853 1 1 1 80 15 10905374 10905392 GAAGCATGAGGACGTAGAG 59 10905434 10908279 GTTTCATAGCTGTACATGCTG 59 NA Nonspecific Mus musculus 50 Kcnc1 ENSMUSG00000058975 ENSMUST00000098442,ENSMUST00000025202 1 2 2 60 7 53683182 53683200 TGCTGCTTATCATCTTCCT 58 53683224 53683242 GCGTAGTAGATCATGGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr286 ENSMUSG00000059460 ENSMUST00000073612 2 1 1 60 15 98057560 98057580 TGATTACATGACATTCCGAGG 59 98057520 98057541 ACAGAAGAAGTTCTCTATGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dcc ENSMUSG00000060534 ENSMUST00000114943,ENSMUST00000073379 1 2 2 80 18 71534255 71538318 CAAGTACAAGTCAGAAGACAC 58 71534195 71534213 ACTGAGAACTCGTACATGG 58 NA Mus musculus 50 Dcc ENSMUSG00000060534 ENSMUST00000114943,ENSMUST00000073379 2 2 2 80 18 71580061 71605998 TTTAGATGAGTCTCAAGTCCC 58 71580001 71580021 GTCCAACTCATGATGATACAG 58 NA Mus musculus 50 EG434171 ENSMUSG00000060565 ENSMUST00000079759 1 1 1 286 7 39305699 39306913 CATCAGTCTTCAGGTGGTG 59 39305431 39305449 CTTTAGTGCCCTCATAGGC 59 NA DesignRelaxed Mus musculus 50 V1rd16 ENSMUSG00000061127 ENSMUST00000080136 1 1 1 60 7 24737853 24737872 TACAGTTGTTGGTTCTTCAG 57 24737895 24737913 GACCAGTGAGCTTAATTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr153 ENSMUSG00000061520 ENSMUST00000077471 2 1 1 60 2 87372441 87372460 ATGTTTGGCAAGAACAAGTC 59 87372483 87372501 AGGAAATGAAGAACTGCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Abpd ENSMUSG00000061795 ENSMUST00000079849 1 1 1 230 7 34150777 34151260 AACAGAAGCATGTCTTCCT 58 34149573 34149593 TCAAGACCATAGTATGACAGG 58 NA DesignNoJunction Mus musculus 50 Inadl ENSMUSG00000061859 ENSMUST00000041284,ENSMUST00000107035,ENSMUST00000107034,ENSMUST00000107029,ENSMUST00000102792,ENSMUST00000030290 1 6 10 147 4 98235689 98235707 AAGGACAAGAATGGACTGG 59 98235815 98258633 GATTGTTTATCTCTAGCAGCTC 58 NA Mus musculus 50 Olfr1377 ENSMUSG00000061952 ENSMUST00000075177 3 1 1 60 11 50798774 50798793 TGACACCTTCATCAATGACC 59 50798815 50798834 CGGTGTCAGGAATATCACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hs6st2 ENSMUSG00000062184 ENSMUST00000114871 2 1 2 173 X 49033210 49033228 GAAGAAATGCACTTGCCAC 59 48743527 49033074 TAATGGAAGTTCCTGGAAGG 59 NA Mus musculus 50 Gsdmdc2 ENSMUSG00000062543 ENSMUST00000071847 1 1 1 80 15 63681377 63682003 AGAGAAGAGGAAACTGAGG 57 63682045 63682065 CACATATAGACTCTCCTCTCC 58 NA Mus musculus 50 NP_444473.1 ENSMUSG00000062751 ENSMUST00000031910 1 1 1 84 6 41412775 41413189 CTTAGCTTTGGTGTCAGTG 58 41413237 41413255 GATAGGAAGCCTCACAGTC 59 NA Mus musculus 50 Kcnma1 ENSMUSG00000063142 ENSMUST00000112423,ENSMUST00000065788,ENSMUST00000100831 2 3 4 171 14 24156174 24156192 CAACATTCCCATCATCACG 58 24133525 24150065 GTCATTGAAGTATGTCGCG 58 NA InUTR Mus musculus 50 Vrk2 ENSMUSG00000064090 ENSMUST00000109504,ENSMUST00000078362,ENSMUST00000109505 1 3 3 80 11 26383314 26386967 CAGTTGCAGTGAACTTGTC 59 26383252 26383271 TTGAGCTTCTGATAGTCTGG 58 NA Mus musculus 50 D12Ertd647e ENSMUSG00000064215 ENSMUST00000085065,ENSMUST00000079294,ENSMUST00000066701,ENSMUST00000076702,ENSMUST00000076788 3 5 5 105 12 104677706 104677725 TTGTCAGCTATTGCTAATGG 57 104678184 104678202 CCACGATGACAGTAGATGG 59 NA DesignNoJunction Mus musculus 50 Cacng3 ENSMUSG00000066189 ENSMUST00000084615 3 1 1 171 7 129898090 129905704 AGAATATCTTCTACGAGCTGTG 59 129905836 129911865 GATGATGTTGCTTAGCCCT 59 NA Mus musculus 50 NP_001104756.1 ENSMUSG00000066463 ENSMUST00000113376 1 1 1 245 9 78160877 78161155 AAAGGATTGCGTGATTCGA 59 78160055 78160074 TTAAATGAAGTACCTCCGGT 58 NA DesignNoJunction Mus musculus 50 ENSMUSG00000066715 ENSMUSG00000066715 ENSMUST00000085967 2 1 1 90 1 172520164 172520183 TAACTAGTAGTGGCGAAACG 59 172520234 172520254 CCAATATTAACACCGCTTCTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 3110035E14Rik ENSMUSG00000067879 ENSMUST00000088666 1 1 1 89 1 9609970 9612683 AAGTCGTTGATTCCTCCAG 59 9612736 9612754 AACAGCTCCATGTTCTGAG 59 NA Mus musculus 50 Lce1i ENSMUSG00000068888 ENSMUST00000090866,ENSMUST00000107307 1 2 2 60 3 92581317 92581335 GGTGAGGAAGACTTCAGAC 59 92581275 92581294 CAATGGAGAATCTTCTGAGC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 4933406P04Rik ENSMUSG00000069713 ENSMUST00000092680 2 1 1 65 10 20030970 20030989 AGAAGTACACCTTCCTAACC 58 20030924 20030944 GTCTTCCTTCTTTGGTAACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001104612.1 ENSMUSG00000071073 ENSMUST00000095262 2 1 1 143 17 46393690 46393708 TGTGACCTCCTATCTGAGG 59 46393815 46393955 CTGAGAACTGGGATCACTG 59 NA Mus musculus 50 3830408C21Rik ENSMUSG00000071181 ENSMUST00000095459 1 1 1 60 13 107822581 107822599 TTCTTTCCTGGTCTGTCAG 58 107822623 107822641 CCTGTCATTCAGGACTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tcp10c ENSMUSG00000071311 ENSMUST00000091648 1 1 1 60 17 13244708 13244727 TCTGATGGTTGTTCTCACTC 59 13244667 13244685 CGTGGAATTCTGGGTAGTC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 1700010D01Rik ENSMUSG00000071721 ENSMUST00000096366 1 1 1 60 X 92928553 92928571 AAGCAACTAAGAAGAGGCA 58 92928511 92928530 TTAGATGTTGTGGTTGATGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Vmn2r122 ENSMUSG00000072049 ENSMUST00000096792 2 1 5 90 X 121243565 121244737 GAGGAACAGTTTCTCAGGT 58 121243493 121243511 CAGTCTGCTGTTTCTTCCT 59 NA Mus musculus 50 EG666471 ENSMUSG00000072608 ENSMUST00000100697 1 1 1 101 14 43217230 43217249 GATTGCATTGGAAGAATGCA 59 43098447 43217166 ATATTTCAGACCTGCTGCT 58 NA InUTR Mus musculus 50 ENSMUSG00000072631 ENSMUSG00000072631 ENSMUST00000100734 3 1 1 126 11 79806222 79806240 GTGACTGAGAAACTGAAGG 57 79806114 79806132 CAGTGGAGATGAGACTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000072756 ENSMUSG00000072756 ENSMUST00000100929 3 1 1 68 6 127269515 127269534 CTTATGCTAAGCACAGTGTC 58 127269565 127269583 ATTCATCTTGCACCAGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700047I17Rik1 ENSMUSG00000073083 ENSMUST00000101415 1 1 1 92 12 56236707 56238108 CATCAACCCTCTCAGTGTG 59 56238164 56238182 ACTCATCAATGGCGTACTG 59 NA Nonspecific Mus musculus 50 EG546282 ENSMUSG00000073267 ENSMUST00000101667 3 1 1 85 X 24350663 24350681 GGTGATACCAAAGGATGGT 58 24345944 24350616 GCCTCTTTACTTCAGAATGAG 58 NA Nonspecific Mus musculus 50 OTTMUSG00000007406 ENSMUSG00000073843 ENSMUST00000098053 3 1 1 60 4 59903213 59903231 TTCTGTCTGAGCTTGTGTC 59 59903171 59903189 CTCATGGAGACAACATTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr17 ENSMUSG00000073897 ENSMUST00000098138 3 1 1 60 7 114241611 114241630 CCTTTCTTGTTGATTCTGGG 58 114241653 114241671 AAGGCATCCTAAAGATGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Foxl2os ENSMUSG00000074122 ENSMUST00000098459 1 1 1 187 9 98853368 98854034 ATACAAGGGAGGATCAGCA 59 98853199 98853217 CTCTATCCACCTACTGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Krtdap ENSMUSG00000074199 ENSMUST00000098559 3 1 1 86 7 31574533 31574554 AGCTACAATAATTACCCTACCG 59 31574770 31574945 TTCTGACTGAAAGGCAGAC 59 NA Mus musculus 50 Plekho2 ENSMUSG00000074239 ENSMUST00000098627 3 1 1 60 9 65399669 65399688 TTTGGAAGTGAATGTACCTG 57 65399628 65399647 TAGTTGAACTAGGTCCTCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 EG667186 ENSMUSG00000074314 ENSMUST00000098727 1 1 1 60 7 22661192 22661211 CCAATGTCTTTCTGTTTGTC 57 22661151 22661169 GGTCTCTGTTTAGAACCAG 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 2310033K02Rik ENSMUSG00000074577 ENSMUST00000099073 3 1 1 81 2 167806823 167806842 AGATTGTCAGTCTGTGTCAG 59 167806411 167806780 CCTTTCTCACCAAATGACAG 58 NA Mus musculus 50 ENSMUSG00000074822 ENSMUSG00000074822 ENSMUST00000099407 2 1 1 123 2 127095674 127095692 TTCCCTGTTCTCTACAGTC 57 127095569 127095587 AGATACTTAGGAGGGCTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fjx1 ENSMUSG00000075012 ENSMUST00000099678 1 1 1 60 2 102290850 102290868 TCCTCTTCGATTACCTGAC 58 102290808 102290826 TGTAAGCTGAAGAGGTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 E530001K10Rik ENSMUSG00000075020 ENSMUST00000099688 3 1 1 60 2 94092541 94092561 ATCTTTCTATTAACCCTCGCC 59 94092501 94092519 TAATGGAGAAGAGGTGGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1272 ENSMUSG00000075061 ENSMUST00000099750 3 1 1 86 2 90122500 90122518 CTCCTCTACAATTGTCCCT 57 90122432 90122450 AATATCTGAGCCAGACAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:1914034 ENSMUSG00000075510 ENSMUST00000100369 2 1 1 60 11 102747360 102747380 TCTCCAGACCAAATATCACAC 59 102747402 102747420 CTGACAGGACACTAGACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075548 ENSMUSG00000075548 ENSMUST00000100447 1 1 1 135 14 68049981 68049999 CTATGGACACATGGCAGAG 59 68048587 68049883 TTGATGTGTCTTCTCCTCTG 59 NA Mus musculus 50 ENSMUSG00000075582 ENSMUSG00000075582 ENSMUST00000100511 1 1 1 107 14 57719518 57719536 GATCTTTCCAATGCTGGTG 58 57719607 57719625 ATGTTTGTCTTCTCCAGTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp652 ENSMUSG00000075595 ENSMUST00000107717,ENSMUST00000091565 3 2 2 90 11 95614710 95614729 CTGTGGAAAGTCTTTCAAGC 59 95614782 95615233 ATCGCAGTTCTCACATCTG 59 NA Mus musculus 50 IGHV2-5 ENSMUSG00000076640 ENSMUST00000103449 1 1 1 60 12 114923826 114923844 CTGGGAGTGATATGGAGAG 58 114923784 114923802 TCAGTCTGGACATGAAAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV5-16 ENSMUSG00000076649 ENSMUST00000103458 3 1 1 60 12 115076924 115076943 TGACTATTACATGGCTTGGG 59 115076883 115076902 GTTTGCAACCCATTCTAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S6 ENSMUSG00000076713 ENSMUST00000103522 1 1 1 67 12 116383903 116383921 CTTCTGGCTACACCTTCAC 59 116383854 116383872 TTCAAGGCCTTGTATAGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV13-5 ENSMUSG00000076859 ENSMUST00000103671 3 1 1 71 14 54415551 54415569 TCAACAGTCACTAAGGGAC 58 54415604 54415622 ATAAGTGCCTGAGTCTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGLC3 ENSMUSG00000076931 ENSMUST00000103743 1 1 1 60 16 19065625 19065643 AATGGTACACCTATCACCC 58 19065583 19065601 ACTTGTTGTCCTCTTTGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gmcl1l ENSMUSG00000078324 ENSMUST00000105117 2 1 1 154 X 31876158 31876176 TAAGGCAATGGTGTCAGAG 59 31876022 31876043 CTCCTTATATTCAAAGGTGAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Q8CBC9_MOUSE ENSMUSG00000078431 ENSMUST00000099368 2 1 1 84 10 89536836 89539737 AAGTGAAACTGTCACTGGA 58 89539782 89539803 CAGATCTTCAAAGGAATAGTCC 58 NA DesignNoJunction Mus musculus 50 NP_082706.1 ENSMUSG00000078451 ENSMUST00000105507 3 1 1 91 10 41214412 41218177 AAGAAGAGGGAACTGAAGG 58 41218232 41218250 AGATCAAATGCGTTACCCA 59 NA Mus musculus 50 NP_001093936.1 ENSMUSG00000078599 ENSMUST00000106572 2 1 1 60 4 111599851 111601049 CGTCTTCAGAGAAACTGAG 57 111601072 111601091 CCTCCTACTCTAGCTAACAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Chd2 ENSMUSG00000078671 ENSMUST00000026895 1 1 1 80 7 80660691 80664374 GATGTGAAGAAGATGTGGGA 59 80660630 80660648 TCGTGATGGTTCTTGTCTG 59 NA Mus musculus 50 A2BH25_MOUSE ENSMUSG00000078753 ENSMUST00000108087 2 1 1 226 7 34528875 34529013 GTATATTGTGGCATTTGCCC 59 34529988 34530006 AAACATCAACATGCTGGTC 58 NA DesignNoJunction, InUTR Mus musculus 50 NP_001075156.1 ENSMUSG00000078780 ENSMUST00000108347 1 1 1 80 3 15863366 15863384 AGAAAGGACCATCAGAGTC 58 15848171 15863323 CTGATGTCTTCAGTTCAAGG 58 NA Mus musculus 50 Igtp ENSMUSG00000078853 ENSMUST00000035266 1 1 1 99 11 58015187 58015205 TTAGTCACAAAGTTGCCAC 58 58019594 58019612 TAGATTTAGACCACGGGCT 59 NA DesignNoJunction Mus musculus 50 NP_001092788.1 ENSMUSG00000079637 ENSMUST00000115190 1 1 1 61 X 34868777 34868795 AACTACAAGAGCTGGAGAG 58 34868820 34870366 ATTTGCCTCCTTAGTGCTG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Ccdc112 ENSMUSG00000079668 ENSMUST00000115476 1 1 1 146 18 46445362 46447021 GCCAGGTTTCAAGAAAGAG 58 46443417 46443437 CCTAGAAGGATCTCTACTGAC 58 NA DesignNoJunction Mus musculus 50 AA881470 ENSMUSG00000000148 ENSMUST00000110807,ENSMUST00000041588,ENSMUST00000100505,ENSMUST00000064662 3 4 5 170 5 141193125 141193143 GTTCCTCAGAAGTACCCAC 59 141193858 141193877 GCATAAGGTCCATGAGTAGG 59 NA DesignNoJunction Mus musculus 50 AA881470 ENSMUSG00000000148 ENSMUST00000110807,ENSMUST00000041588,ENSMUST00000110806,ENSMUST00000100505 3 4 5 244 5 141186232 141187463 TTTGAGTACCTTCAGCAGG 59 141188521 141188540 ATATGTACTAGGAGCTGGCT 59 NA DesignRelaxed Mus musculus 50 Cd52 ENSMUSG00000000682 ENSMUST00000000696 1 1 2 72 4 133650849 133650868 TTCTTCTGGTTGTGATTCAG 57 133649763 133649781 TTGTTAGTACCAGAAGCGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fmr1 ENSMUSG00000000838 ENSMUST00000088546,ENSMUST00000114651,ENSMUST00000101518,ENSMUST00000114655,ENSMUST00000114653 3 5 8 105 X 65958466 65958484 GTTGGACCTAACTCCTCTG 58 65958553 65959051 ATGAAACCACTAACACCCT 58 NA Mus musculus 50 Agpat3 ENSMUSG00000001211 ENSMUST00000105388,ENSMUST00000105390,ENSMUST00000105389,ENSMUST00000001240,ENSMUST00000105387 1 5 5 184 10 77745985 77746944 AGTACATGTGGTTTCTCCTG 59 77745202 77745220 CACGTCATAGATAGCTGCA 59 NA Mus musculus 50 Nfix ENSMUSG00000001911 ENSMUST00000109764,ENSMUST00000099070,ENSMUST00000076715,ENSMUST00000098572,ENSMUST00000109762,ENSMUST00000063596 3 6 6 130 8 87251831 87251850 TAGTTCAAACCAGCAAGGAG 59 87251135 87251515 CAACTGGAGTCTGTGATACTC 59 NA Mus musculus 50 Nfix ENSMUSG00000001911 ENSMUST00000109764,ENSMUST00000098572,ENSMUST00000063596 3 3 6 83 8 87240091 87240109 CTTCCTATGCCTGATTCCA 58 87237743 87240044 TGTCGTTGTGAATGAAGGT 59 NA Mus musculus 50 Pex19 ENSMUSG00000003464 ENSMUST00000075895,ENSMUST00000111252 2 2 2 94 1 174063425 174064136 TCTCATGCAGCAGTTACAG 59 174064356 174064374 GATTGAGAGCATCCAGGTC 59 NA Mus musculus 50 Mast2 ENSMUSG00000003810 ENSMUST00000106484,ENSMUST00000106486,ENSMUST00000046416 3 3 5 84 4 116003070 116006031 CACAGAACAGACAGGACTG 59 116003004 116003022 TAGAGCTAGGAGTGTTGGT 59 NA Mus musculus 50 Psg19 ENSMUSG00000004542 ENSMUST00000004657,ENSMUST00000081213 1 2 2 177 7 19377916 19377934 GAGTCTATCATCAGTGGCC 59 19375672 19377775 GTGTCACAAGCTTGTTCAC 59 NA Mus musculus 50 Cd44 ENSMUSG00000005087 ENSMUST00000005218,ENSMUST00000111200,ENSMUST00000111199,ENSMUST00000111198,ENSMUST00000111197,ENSMUST00000111196,ENSMUST00000060516,ENSMUST00000111195,ENSMUST00000111194,ENSMUST00000111192,ENSMUST00000111191,ENSMUST00000111190 2 12 15 80 2 102671538 102671557 TGAGGTCTTTGGAGAAACTG 59 102668758 102671495 TCTCGATCTCCTGGTAAGG 59 NA Mus musculus 50 Eif2ak4 ENSMUSG00000005102 ENSMUST00000005233,ENSMUST00000110877 1 2 8 80 2 118226318 118226337 AGCTGGTGAAGAAGTATACG 59 118226377 118230797 TCTATTTCGGGAACTACATCTG 59 NA Mus musculus 50 AA536749 ENSMUSG00000005417 ENSMUST00000066330 3 1 8 163 11 59574821 59577891 AGTCTCAAGGCTACATGTG 58 59578018 59578916 TCAATGGCTGATATGGTGG 59 NA Mus musculus 50 Gm693 ENSMUSG00000006218 ENSMUST00000006380 1 1 1 60 4 140936240 140936258 CAGATGGATTTCTGTTGGG 58 140936529 140936547 ATATGTAGCCATTGGTGGT 58 NA DesignNoJunction Mus musculus 50 Pou2f2 ENSMUSG00000008496 ENSMUST00000108415,ENSMUST00000108418,ENSMUST00000085970,ENSMUST00000108414,ENSMUST00000108413 2 5 8 88 7 25906043 25906061 ACCCGACATTAACCATCAG 59 25901161 25905865 CTTCAGCCTTGATCTTGGT 59 NA Mus musculus 50 Hipk1 ENSMUSG00000008730 ENSMUST00000106838 2 1 3 124 3 103560642 103560660 GGAAGGAAATGAGGGTCTG 59 103558235 103560554 TTGTAGTCCAGGGATTGTG 58 NA Mus musculus 50 Vav2 ENSMUSG00000009621 ENSMUST00000009765 3 1 2 81 2 27140365 27141163 ACATCAAGAAGTCTCATGGG 59 27138883 27138901 AAGAACTGAAAGCCTTGCT 59 NA Mus musculus 50 Zfp296 ENSMUSG00000011267 ENSMUST00000108453,ENSMUST00000011411 2 2 3 168 7 20162963 20163169 GTTCTAAGTCTTCCGACCG 59 20163300 20164971 TCTTTGGATTCTGAGATGGG 59 NA Mus musculus 50 Bnip2 ENSMUSG00000011958 ENSMUST00000034754,ENSMUST00000085393 3 2 2 81 9 69843927 69843946 CTTTACCAGAAGATGACAGC 58 69843989 69844903 TTAACTTCTAAGGAGCCAGG 58 NA Mus musculus 50 5930434B04Rik ENSMUSG00000015488 ENSMUST00000114007,ENSMUST00000114006,ENSMUST00000114004,ENSMUST00000015632,ENSMUST00000114005,ENSMUST00000114003 2 6 6 84 2 26869675 26871011 GTGTGGATGATCATGAACG 58 26871058 26871077 CTACTGTGTTTGCAAACTCC 59 NA InUTR Mus musculus 50 Lcorl ENSMUSG00000015882 ENSMUST00000016026,ENSMUST00000113981,ENSMUST00000087164 1 3 5 108 5 46127044 46127063 GGGATGGAGTGTTAGATCTC 58 46125710 46126973 TTTCTGTGTAGTCTCCCAG 58 NA Mus musculus 50 Nt5c3l ENSMUSG00000017176 ENSMUST00000107398,ENSMUST00000107399,ENSMUST00000092688,ENSMUST00000092689,ENSMUST00000107397 1 5 6 87 11 100292583 100294241 CAGTGAGGATGGATTCCTG 59 100292514 100292532 GTAGCTGGAGTTCTCACAC 59 NA Mus musculus 50 Mpdu1 ENSMUSG00000018761 ENSMUST00000094073,ENSMUST00000018905 1 2 3 96 11 69470821 69470930 TCTGTTCAGGAAACTGGAG 58 69470743 69470761 TCCAGTAGAAGAGGACCTG 59 NA Mus musculus 50 Unc5b ENSMUSG00000020099 ENSMUST00000077925,ENSMUST00000105458 3 2 2 95 10 60231917 60231935 ACAGTTACCACAACCTACG 59 60231221 60231858 GGTAGAAGGGAATCTCCTG 58 NA Mus musculus 50 Cdkl3 ENSMUSG00000020389 ENSMUST00000109080,ENSMUST00000109078,ENSMUST00000063321,ENSMUST00000109082,ENSMUST00000109081,ENSMUST00000063303,ENSMUST00000109079,ENSMUST00000109074 2 8 10 81 11 51839364 51839383 TGAGAGGACATCATCTACTG 57 51839425 51840276 CAGCTCTGGTATGAATTTCTC 58 NA Mus musculus 50 Ogdh ENSMUSG00000020456 ENSMUST00000003461,ENSMUST00000109797,ENSMUST00000079291,ENSMUST00000101554,ENSMUST00000093350,ENSMUST00000101555,ENSMUST00000081894 2 7 7 84 11 6197127 6197145 TCTTAGTGGGACTAGTTCG 57 6197192 6213799 GTCCCATGACTTATGTACAC 57 NA Mus musculus 50 Myocd ENSMUSG00000020542 ENSMUST00000108695,ENSMUST00000102635 2 2 4 83 11 65035606 65037251 ATTGGATAGTGCCAAGACTG 59 65035542 65035560 ATGTGCATAGTAACCAGGC 59 NA Mus musculus 50 Pik3cg ENSMUSG00000020573 ENSMUST00000053215,ENSMUST00000085469 1 2 3 80 12 32876989 32877009 CAGACTTCTTGTTTGTGATGG 59 32861706 32876948 CTCTAACACAGACATCCTGG 59 NA Mus musculus 50 Tyki ENSMUSG00000020638 ENSMUST00000085524 1 1 3 82 12 27158943 27158966 GAGGAAGATCTTATGATGAACC 58 27159010 27159029 TTAGCTATTTCAGAAGCCAC 57 NA Mus musculus 50 Mboat2 ENSMUSG00000020646 ENSMUST00000078902 2 1 4 82 12 25567592 25567612 CACTTTCTTGTACAAAGTGGG 59 25567656 25619446 ATGATCATCATTGGGTGCT 59 NA Mus musculus 50 Rffl ENSMUSG00000020696 ENSMUST00000074515,ENSMUST00000071152,ENSMUST00000108173,ENSMUST00000108172,ENSMUST00000108171,ENSMUST00000093975,ENSMUST00000021036,ENSMUST00000103218,ENSMUST00000108169 3 9 9 100 11 82623578 82623596 TCAACTATAAGGGCTGCTG 59 82622025 82623514 TTCATTACCAGACACCAGG 58 NA Mus musculus 50 Rffl ENSMUSG00000020696 ENSMUST00000074515,ENSMUST00000071152,ENSMUST00000108173,ENSMUST00000108172,ENSMUST00000108171,ENSMUST00000093975,ENSMUST00000021036,ENSMUST00000103218,ENSMUST00000108169 3 9 9 100 11 82623578 82623596 TCAACTATAAGGGCTGCTG 59 82622025 82623514 TTCATTACCAGACACCAGG 58 NA Mus musculus 50 Mink1 ENSMUSG00000020827 ENSMUST00000072237,ENSMUST00000072873,ENSMUST00000102559,ENSMUST00000102558 1 4 5 147 11 70417307 70417325 ATCAAGACTTACCTGAGCC 58 70417436 70417694 CTGTCTCCTCTTTCTCACC 58 NA Mus musculus 50 Gfap ENSMUSG00000020932 ENSMUST00000067444,ENSMUST00000077902 2 2 2 80 11 102755743 102755761 GATTCGCACTCAATACGAG 58 102754890 102755699 AGGTCTGCAAACTTAGACC 59 NA Mus musculus 50 Rtn1 ENSMUSG00000021087 ENSMUST00000078505,ENSMUST00000101331,ENSMUST00000021497 1 3 3 90 12 73317902 73317920 TGTGTACGTTAAGCACCAG 59 73313552 73317763 TTTAGCCTGGATCTTTGCC 59 NA Mus musculus 50 Hif1a ENSMUSG00000021109 ENSMUST00000110461 3 1 2 177 12 75041608 75042724 GTTCACCTGAGCCTAACAG 59 75042973 75042991 ATTGGGATATAGGGAGCCA 59 NA Mus musculus 50 Slc17a4 ENSMUSG00000021336 ENSMUST00000021769 2 1 2 81 13 23998495 23998513 CTTCCACAGAAAGACCTCC 59 23997509 23998450 TAAACAGGAGCCACTACCT 59 NA Mus musculus 50 Fars2 ENSMUSG00000021420 ENSMUST00000099582,ENSMUST00000021857,ENSMUST00000110250 3 3 3 81 13 36433957 36501956 CAAGTTTCAGCCTCTTAGC 58 36502000 36502019 ATTCTCCGTGTAGTTCTCAG 58 NA Mus musculus 50 Gfm2 ENSMUSG00000021666 ENSMUST00000042084 2 1 3 86 13 97925547 97930984 ATTGAACAATTACAGGCTGC 59 97931033 97931051 CTTGTTCTTCAAGGCACTC 58 NA Mus musculus 50 Pde4d ENSMUSG00000021699 ENSMUST00000079975,ENSMUST00000074103 2 2 2 87 13 110530709 110530727 CTTCCTGTACCGATCTGAC 59 110530776 110547794 ATCTCCATGTATATCACTGGC 59 NA Mus musculus 50 Lcp1 ENSMUSG00000021998 ENSMUST00000110915,ENSMUST00000022575,ENSMUST00000110916,ENSMUST00000110913 3 4 4 99 14 75608362 75610256 ACATCAAGGACTCCAAAGC 59 75610318 75610337 AGTCCTGACATGTCAATCAC 59 NA Mus musculus 50 Lcp1 ENSMUSG00000021998 ENSMUST00000110915,ENSMUST00000022575,ENSMUST00000110916,ENSMUST00000110913 3 4 4 99 14 75608362 75610256 ACATCAAGGACTCCAAAGC 59 75610318 75610337 AGTCCTGACATGTCAATCAC 59 NA Mus musculus 50 Olfm4 ENSMUSG00000022026 ENSMUST00000088735 1 1 2 91 14 80417953 80417972 GAAGTATCCTCTGGATCCTG 58 80418026 80420939 ATGACTACAGCTTCCAAGG 58 NA Mus musculus 50 Pycrl ENSMUSG00000022571 ENSMUST00000053918,ENSMUST00000023232 3 2 2 87 15 75749697 75749715 GAAGCTAAACAAGTGCTGG 59 75749252 75749270 GGTTGGAGTGAGTAGTCTG 59 NA DesignNoJunction Mus musculus 50 Bbx ENSMUSG00000022641 ENSMUST00000089404,ENSMUST00000089399,ENSMUST00000114489,ENSMUST00000023317,ENSMUST00000114488,ENSMUST00000114477 1 6 7 80 16 50274711 50274730 AGATACTAGCTGATTGGTGG 58 50266473 50274669 CATCTTTATACTCCTTGGCC 57 NA Mus musculus 50 Nat13 ENSMUSG00000022698 ENSMUST00000063520,ENSMUST00000063542,ENSMUST00000023382,ENSMUST00000114661 1 4 5 80 16 44158048 44159585 CAATATCTATCTGCATGTCCAG 58 44159625 44159644 GTCTCGATAATCTCAAAGCC 58 NA Mus musculus 50 Zbtb20 ENSMUSG00000022708 ENSMUST00000114694,ENSMUST00000079441,ENSMUST00000114691,ENSMUST00000114690,ENSMUST00000114695 3 5 5 82 16 43611031 43618440 GTTCGTACATACAGGTGAG 57 43618485 43618504 TGTGCTTGATAAGGTAATCC 57 NA Mus musculus 50 Ppil2 ENSMUSG00000022771 ENSMUST00000023455,ENSMUST00000061792,ENSMUST00000115721 2 3 3 82 16 17091976 17092319 AGGAACTTTGTGATCCAGG 59 17091349 17091367 TCATCTTTGAAAGGCTTGC 58 NA Mus musculus 50 Arl13b ENSMUSG00000022911 ENSMUST00000114319,ENSMUST00000089289 2 2 3 81 16 62806466 62811688 TTAAGGGAAGAAAGAGAACGAG 59 62806406 62806424 CAAGAACTGGTCCTGAGTC 59 NA Mus musculus 50 Runx1 ENSMUSG00000022952 ENSMUST00000023673,ENSMUST00000046015,ENSMUST00000113956,ENSMUST00000113957 1 4 4 63 16 92689243 92689261 GAGATTCAACGACCTCAGG 59 92669035 92669053 GATGGTCAGAGTGAAGCTC 59 NA DesignNoJunction Mus musculus 50 Reg2 ENSMUSG00000023140 ENSMUST00000023906 2 1 1 61 6 78356236 78356254 AATTGAAGACCGTTTGACC 58 78356503 78356521 GACCTGCATTCATGTTCTG 58 NA DesignNoJunction Mus musculus 50 Gabrr2 ENSMUSG00000023267 ENSMUST00000024035,ENSMUST00000108162 3 2 2 114 4 33168516 33169261 ATACAGCATGAGGATTACGG 59 33169524 33169542 ATCTTCATCTGTGTACGCA 58 NA Mus musculus 50 Phf10 ENSMUSG00000023883 ENSMUST00000115639,ENSMUST00000024657 1 2 2 80 17 15091844 15091863 GTTCAACAGCAACTTAAACC 57 15091116 15091801 GGCACTTGGATAACATGTG 58 NA Mus musculus 50 Galnt14 ENSMUSG00000024064 ENSMUST00000112591 3 1 2 119 17 73857252 73858880 GAGACCCTTTGGAAACTCC 59 73857151 73857170 GGATCTGTAGGTGATTCCAC 59 NA Mus musculus 50 Yipf4 ENSMUSG00000024072 ENSMUST00000024873,ENSMUST00000024874 2 2 2 85 17 74893364 74893382 AGACAATCCTGACTTCTGG 58 74893431 74895939 ATGAGACCACCCTAAACTG 58 NA Mus musculus 50 Cuta ENSMUSG00000024194 ENSMUST00000114935,ENSMUST00000025027 2 2 3 106 17 27075553 27075683 GATCACATCCATCTATGAATGG 58 27075364 27075382 GAACAAACTCTGTCAGAGC 58 NA Mus musculus 50 Slc4a9 ENSMUSG00000024485 ENSMUST00000097616 3 1 4 157 18 36696561 36700395 ACCTGTGCTCAAGTTACTG 59 36700515 36700534 CATTTCCACTGAACAAGTGC 59 NA Mus musculus 50 Drap1 ENSMUSG00000024914 ENSMUST00000113674 1 1 2 96 19 5423839 5423858 CTTCTTGAAAGACTTGGTGG 58 5423665 5423780 TACAGTCCATCTTCGAGGA 59 NA Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000111659,ENSMUST00000111653 2 2 15 121 19 55985150 55985168 CGCTAGGATGGTTAGTACC 58 55987130 55991841 AGAGGACAGAAAGCTAGAC 57 NA Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000041717,ENSMUST00000111662,ENSMUST00000086848,ENSMUST00000061496,ENSMUST00000078917,ENSMUST00000111659,ENSMUST00000111651,ENSMUST00000111649,ENSMUST00000111653,ENSMUST00000111656 1 10 15 122 19 55817577 55817595 GATGGAGGGCTCTTTAAGG 59 55817680 55892265 CATCTGAAGATAGGTTCGGG 59 NA Mus musculus 50 Ablim1 ENSMUSG00000025085 ENSMUST00000111559,ENSMUST00000111558,ENSMUST00000111555,ENSMUST00000079360,ENSMUST00000111546,ENSMUST00000111541 1 6 15 92 19 57123991 57125629 CATGTTCCAGATCAAGGGA 58 57121521 57121539 ATCTTCTGAAGCCTTGCTC 59 NA Mus musculus 50 Stra13 ENSMUSG00000025144 ENSMUST00000055424,ENSMUST00000106154,ENSMUST00000106155 3 3 4 131 11 120573067 120573173 GATTGCAAGACCAAAGTCAG 59 120572731 120572749 ATCCACTTCCACAACATCC 59 NA Mus musculus 50 Wdr45l ENSMUSG00000025173 ENSMUST00000106109 3 1 3 135 11 121199948 121210554 AGAAACAAGTGATGATCTGG 57 121198346 121198365 GTGAACACCTTAATCATGGA 57 NA Mus musculus 50 Apex2 ENSMUSG00000025269 ENSMUST00000112725,ENSMUST00000112727,ENSMUST00000112720,ENSMUST00000026303,ENSMUST00000112719 2 5 6 98 X 147020578 147021593 CTATTCTGGTGTGGCTACC 59 147020498 147020517 CCAATATCTCCATTCAGGGT 58 NA Mus musculus 50 Smarcc2 ENSMUSG00000025369 ENSMUST00000105235,ENSMUST00000099131,ENSMUST00000026433 3 3 3 81 10 127900758 127900777 GATTTCCAGAATCCATCACG 58 127900819 127900932 GGCAATTATTCTGTACCAAGG 59 NA Mus musculus 50 1190003J15Rik ENSMUSG00000025481 ENSMUST00000106050,ENSMUST00000026554 1 2 2 98 7 148022711 148022729 ATAAGCTGTTCTTCGACAC 57 148023593 148023612 GGGTCTCCTTTGTAATAGTG 57 NA DesignNoJunction Mus musculus 50 Zfp711 ENSMUSG00000025529 ENSMUST00000039658,ENSMUST00000071814 3 2 3 121 X 109738474 109741719 AGGATGATATCAGAGATGAGAG 58 109745477 109745496 AATTTGAAGGTACTGTGCTG 58 NA Mus musculus 50 Rnf25 ENSMUSG00000026171 ENSMUST00000113721,ENSMUST00000027357 2 2 2 80 1 74645362 74645653 AAAGGGAATGGCAGATCAC 59 74645300 74645318 GACAAACTGCGAATCTTGG 59 NA Mus musculus 50 Asb1 ENSMUSG00000026311 ENSMUST00000113020,ENSMUST00000027538,ENSMUST00000086843 2 3 3 86 1 93440808 93440826 ATGATGCAGCCTATGTAGG 58 93443506 93443524 CAGACTTCTCATTGATGCG 58 NA DesignNoJunction Mus musculus 50 Pam ENSMUSG00000026335 ENSMUST00000058762 2 1 2 101 1 99760849 99760867 CTAGAGTCAACCTTGAGGC 59 99749796 99760785 TTCCACATGGAAATCTCCTG 59 NA Mus musculus 50 Iars2 ENSMUSG00000026618 ENSMUST00000027921,ENSMUST00000110975 3 2 3 83 1 187120382 187121359 CCTTTCAGGACAGTGATGG 59 187120317 187120336 ATTAATGACATTCCCGAGGG 59 NA Mus musculus 50 Fcgr2b ENSMUSG00000026656 ENSMUST00000081103 1 1 3 83 1 172891356 172895842 CAGGTTCCAGACAATCCTC 59 172891196 172891215 ATGCTTGAGAAGTGAGTAGG 59 NA Mus musculus 50 Rabgap1l ENSMUSG00000026721 ENSMUST00000028049,ENSMUST00000111640 1 2 5 80 1 162575529 162612186 ATGAAGCAGAAGAGGAGAG 58 162575467 162575486 AGAGAATCTTCTCAGGACAG 58 NA Mus musculus 50 Tnn ENSMUSG00000026725 ENSMUST00000039178,ENSMUST00000111660,ENSMUST00000086105 2 3 4 82 1 162028393 162028411 GGATTTCTTCAAGCGTTGG 59 162027478 162028349 GTAGTTTATCAAGTCCAAGCC 58 NA Mus musculus 50 Spopl ENSMUSG00000026771 ENSMUST00000028110 1 1 2 91 2 23393150 23398726 ATTCTGTGAGGTGAGTGTG 59 23393077 23393095 CTGCTAGTCGACATTCTGG 59 NA Mus musculus 50 Pfkfb3 ENSMUSG00000026773 ENSMUST00000028114,ENSMUST00000114844,ENSMUST00000100411 1 3 7 159 2 11401952 11401970 TGAGACGCAATAGTGTCAC 59 11399672 11401829 TTCCCTAGCAAAGGTTGTC 59 NA Mus musculus 50 4931423N10Rik ENSMUSG00000026774 ENSMUST00000114505 1 1 2 80 2 23068020 23082412 TGATGAAGGACAACCTCAC 59 23082453 23082474 CCATCCTTACTAAGAATTGTGC 59 NA Nonspecific Mus musculus 50 Odf2 ENSMUSG00000026790 ENSMUST00000113757 1 1 13 147 2 29748609 29748627 GATGAGAACACTCCTGTCC 59 29749027 29756609 AATGAGGTGGATTCTTGGT 58 NA Mus musculus 50 Slc25a25 ENSMUSG00000026819 ENSMUST00000113310,ENSMUST00000113305,ENSMUST00000113307,ENSMUST00000113308 1 4 6 115 2 32275932 32276839 GAGAAGATTCTTAAGAGCATGG 58 32275838 32275856 CAGTACAGGATGATCTCCG 58 NA Mus musculus 50 Tor1b ENSMUSG00000026848 ENSMUST00000102851,ENSMUST00000028199 2 2 2 80 2 30809522 30811301 GATAAAGGTGTACCAGGACC 59 30811344 30811362 TCAAAGATGAAGACGGAGC 59 NA Mus musculus 50 Gapvd1 ENSMUSG00000026867 ENSMUST00000102800,ENSMUST00000028224,ENSMUST00000113103,ENSMUST00000113099 3 4 7 81 2 34576242 34580577 ATCGATTACCTATAGCAACTCG 59 34576182 34576202 TGAGATGATCCTTCATGATCC 59 NA Mus musculus 50 Dab2ip ENSMUSG00000026883 ENSMUST00000112997,ENSMUST00000112987,ENSMUST00000091010,ENSMUST00000112992,ENSMUST00000112980,ENSMUST00000095461,ENSMUST00000112989,ENSMUST00000112986,ENSMUST00000065001,ENSMUST00000028246,ENSMUST00000112983,ENSMUST00000112981,ENSMUST00000112982 1 13 13 80 2 35578735 35582956 ATCAGCAGGTTGATGTCAG 59 35582998 35583018 CTTCTGTTTGGAATCTACAGC 58 NA Mus musculus 50 Grb14 ENSMUSG00000026888 ENSMUST00000112441 2 1 2 167 2 64791757 64813615 GGGTGATTAAAGTTTACAGCG 59 64776539 64791631 CGGTTCTTTCTAAACCTATGTG 59 NA Mus musculus 50 Ly75 ENSMUSG00000026980 ENSMUST00000112533,ENSMUST00000028362 2 2 3 82 2 60170427 60170445 CAATCACAGCTTTCTTGCC 59 60169189 60170381 CCTCGCCAGAAATATTTGC 59 NA Mus musculus 50 Lrp2 ENSMUSG00000027070 ENSMUST00000080953,ENSMUST00000100051 3 2 3 80 2 69351428 69352206 CCATCGATTGGAGTACTTCC 59 69351367 69351386 CTAAACCATCAAGGTTGCTG 59 NA Mus musculus 50 Ola1 ENSMUSG00000027108 ENSMUST00000112058,ENSMUST00000028517,ENSMUST00000112055,ENSMUST00000100015 1 4 4 80 2 72980435 72994803 CCCGAGTATGACATAATGTG 57 72980374 72980393 ATTCCAGTCATGATAGAAGC 57 NA Mus musculus 50 Ttc17 ENSMUSG00000027194 ENSMUST00000111238,ENSMUST00000111237,ENSMUST00000094801 1 3 4 83 2 94216285 94217765 TACAGAAGAATGCTTCCTCC 59 94216221 94216239 CCACTACCTGATATGGCTC 58 NA Mus musculus 50 Ttbk2 ENSMUSG00000027284 ENSMUST00000028736,ENSMUST00000110694,ENSMUST00000028740,ENSMUST00000085840,ENSMUST00000057135 2 5 6 156 2 120648327 120650979 AGGTTAAATGGAATCCACCC 59 120632624 120648211 CACCTCCAATCTTTCTTAACAC 59 NA Mus musculus 50 Lpin3 ENSMUSG00000027412 ENSMUST00000109456 2 1 4 144 2 160725338 160725356 GACCTCACTAAGAATCCCG 59 160725559 160727376 CCACAAGTTCTTTCTCAGGT 59 NA Mus musculus 50 Rrbp1 ENSMUSG00000027422 ENSMUST00000037875 2 1 5 133 2 143813900 143813918 GAAGAAGTCTGGTTCCAGG 59 143811807 143811825 ATACAGGTGTTTCCAACGT 59 NA DesignNoJunction, InUTR Mus musculus 50 Atp9a ENSMUSG00000027546 ENSMUST00000109177,ENSMUST00000109176,ENSMUST00000109171,ENSMUST00000029060,ENSMUST00000109175,ENSMUST00000109170 2 6 6 60 2 168466163 168466181 TGTGTTCTACTTTGCATCC 57 168465481 168466141 GGTAGAATACCCAATGATCAG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Dcun1d1 ENSMUSG00000027708 ENSMUST00000108182,ENSMUST00000029258 2 2 2 60 3 35818088 35819909 GTACACTAGATACAAAGACCC 57 35818048 35818068 CTGCTGTATACCATCTATTCC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Tmem77 ENSMUSG00000027900 ENSMUST00000029507 3 1 2 137 3 106369093 106375899 AAATTTCCAGGGCTATGTG 57 106376509 106376527 CCATGTAAATTGGCTTCCA 57 NA Mus musculus 50 Arhgef2 ENSMUSG00000028059 ENSMUST00000029694,ENSMUST00000107510 2 2 2 89 3 88438573 88438913 CATCAGTCAGTTCTCAGGT 58 88438966 88438984 TAGAGCTTTAAGGCCTTGG 58 NA Mus musculus 50 Usp1 ENSMUSG00000028560 ENSMUST00000030289,ENSMUST00000091358 2 2 2 88 4 98593351 98594930 TAGAGGATCTGAGATTGACCA 59 98594977 98594998 CCACAAATGGTAACAAGTTCTC 59 NA Mus musculus 50 Epb4.1 ENSMUSG00000028906 ENSMUST00000105975,ENSMUST00000105970,ENSMUST00000105982 1 3 14 80 4 131562033 131562885 TATAGAGACACAGCCTGAG 57 131561971 131561990 ATCCAGATCATAATCGAAGC 57 NA Mus musculus 50 Tnfrsf9 ENSMUSG00000028965 ENSMUST00000105672,ENSMUST00000060901 3 2 5 120 4 150308411 150308429 AAGGTCTGTGCTTAAGACC 59 150308512 150318892 CTTCTTAAATGCTGGTCCTC 58 NA Mus musculus 50 Ccnl2 ENSMUSG00000029068 ENSMUST00000030944 1 1 3 106 4 155194440 155194458 ACTACATGAATGACAGCCT 58 155194528 155194901 TAAAGGGATCTCCAGTGTC 57 NA Mus musculus 50 B930006L02Rik ENSMUSG00000029461 ENSMUST00000107042,ENSMUST00000049053 1 2 3 122 7 107961500 107972649 CTAGTTATGCTCCAGCCAC 59 107972735 107972753 CCTGGTAAGTTCGGTTCTC 59 NA Mus musculus 50 C230052I12Rik ENSMUSG00000030493 ENSMUST00000032704,ENSMUST00000108048 1 2 2 89 7 36180052 36180070 TTACTGTGCTAGACCTTGG 58 36178098 36179999 TTTGCTCTTGAACCAAGTG 58 NA Mus musculus 50 Trpm1 ENSMUSG00000030523 ENSMUST00000107525,ENSMUST00000085222,ENSMUST00000098399,ENSMUST00000107527,ENSMUST00000107519,ENSMUST00000107522 2 6 10 86 7 71392376 71392394 TCATCATTATGCGCCTCAG 59 71392443 71393083 TAAGGAACAACTTCAACCCA 59 NA Mus musculus 50 3200002M19Rik ENSMUSG00000030649 ENSMUST00000106978,ENSMUST00000106975,ENSMUST00000032884 2 3 5 74 7 109046322 109046464 TCAAACTCAGCTTAGGAGC 59 109046501 109046520 TAAACCACAGTGTCTCAGTC 59 NA DesignRelaxed Mus musculus 50 1500003O22Rik ENSMUSG00000030888 ENSMUST00000098148,ENSMUST00000033179 2 2 2 80 7 112882957 112883212 ACCAAACAGTTCACAATTCC 58 112882896 112882916 AGTTAGGTGACATAGACTCAG 58 NA Mus musculus 50 Uros ENSMUSG00000030979 ENSMUST00000106145,ENSMUST00000106146,ENSMUST00000033276 1 3 4 80 7 140881355 140882202 TATGAAGATCAGGGTATCCCA 59 140881295 140881313 CGCCTGAATATACTCGAGG 59 NA Mus musculus 50 Otud5 ENSMUSG00000031154 ENSMUST00000115666,ENSMUST00000115668,ENSMUST00000115665,ENSMUST00000033494 1 4 5 81 X 7444942 7445061 TAGCACAGAACCTATCAACAC 59 7445104 7445122 GATATTCCGGTGGTAGCTG 59 NA Mus musculus 50 2610029G23Rik ENSMUSG00000031226 ENSMUST00000033577 3 1 1 77 X 102276712 102276731 TGATATTGAAATGGCTTGGG 58 102277277 102277296 GGGTCAACTGATGAAATCAG 58 NA DesignNoJunction Mus musculus 50 Srpx2 ENSMUSG00000031253 ENSMUST00000113303,ENSMUST00000113304,ENSMUST00000033606 1 3 3 80 X 130460510 130460785 CCTGTATGTGTAGACATAGATCC 59 130460824 130460843 AGTTAGTTTCTCTGGCTCTG 59 NA Mus musculus 50 Cstf2 ENSMUSG00000031256 ENSMUST00000113287,ENSMUST00000113291,ENSMUST00000033609,ENSMUST00000113283,ENSMUST00000113281 2 5 6 83 X 130609273 130609291 CCTATGCCTAGTGGAATCC 58 130609338 130614877 CATGACTGGTACCTGTCTG 59 NA Mus musculus 50 Gabre ENSMUSG00000031340 ENSMUST00000114557 2 1 2 83 X 69516452 69516471 TGGACCTCATGTTAATCTGG 59 69515158 69516406 TTCTTTCCACTAGGCTGAG 58 NA Mus musculus 50 Rbm41 ENSMUSG00000031433 ENSMUST00000113007,ENSMUST00000113011,ENSMUST00000033810,ENSMUST00000096311 3 4 5 83 X 136502788 136502806 AATCGTTTGTCAGAGGAGG 59 136489582 136502743 CAGATATAGCACCTTGTTTGG 58 NA Mus musculus 50 Mcf2l ENSMUSG00000031442 ENSMUST00000095456,ENSMUST00000110879,ENSMUST00000110876,ENSMUST00000033819,ENSMUST00000064464,ENSMUST00000098927,ENSMUST00000110873,ENSMUST00000110867,ENSMUST00000110866,ENSMUST00000110863 1 10 12 93 8 13006759 13006777 CACACCTCATCTCAACAGG 59 13006833 13007696 CGCAGGAATATTCTGTTGTG 59 NA Nonspecific Mus musculus 50 Cd209d ENSMUSG00000031495 ENSMUST00000011445 3 1 2 90 8 3878313 3878332 GAAGAGTGTTTGATGAGTGG 58 3877961 3878261 TCGTATACTCTGCCAAACTC 59 NA Mus musculus 50 4930510E17Rik ENSMUSG00000032048 ENSMUST00000034550 2 1 1 61 9 53087758 53087776 CTGAAGAAGGAAGGATGGG 59 53087799 53087819 CATACAACTTGTTGGGAAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 2310046A06Rik ENSMUSG00000032355 ENSMUST00000034910 1 1 2 80 9 77038525 77038543 CACTAGATGAACCAGCCAG 59 77038175 77038483 GAGAATCAGAAGAATGCTCCA 59 NA Mus musculus 50 Mtap4 ENSMUSG00000032479 ENSMUST00000072772 2 1 3 149 9 109971356 109971374 CTTCCACTAAGCCTAGCTC 59 109971487 109975132 TGGATACTATCTGGACCCG 59 NA Mus musculus 50 Mapkapk3 ENSMUSG00000032577 ENSMUST00000035194 2 1 3 80 9 107159462 107159753 GGATCAATCAATCCATGGTG 58 107159401 107159419 CATCCCAGTGATCTTTGTC 57 NA Mus musculus 50 Malt1 ENSMUSG00000032688 ENSMUST00000102868,ENSMUST00000049248 3 2 2 80 18 65632747 65632767 CAAGTATAGTCCACAAACCAC 58 65632805 65634802 GATCAATATCTAGGTCAAGAGGG 59 NA Mus musculus 50 Klra1 ENSMUSG00000033024 ENSMUST00000116521,ENSMUST00000071554,ENSMUST00000112032,ENSMUST00000014476,ENSMUST00000088019,ENSMUST00000112034 3 6 6 122 6 130033067 130068995 TGGCCAATCTAAACTTGAC 57 130032963 130032983 CCACAAATACAGTAGTAGGGA 58 NA Nonspecific Mus musculus 50 Myh2 ENSMUSG00000033196 ENSMUST00000018640 2 1 2 92 11 67004885 67004906 CTGGTATCTCAGTTATCAAGGG 59 67004958 67005109 GTTCTTGGCCTTTACTTCCT 59 NA Mus musculus 50 Armcx1 ENSMUSG00000033460 ENSMUST00000051256,ENSMUST00000113199 3 2 6 98 X 131253639 131254176 CTTCTCCTGATCTGCAAGAG 59 131254237 131254255 AGATGTCTTGAGTCAGGGT 59 NA InUTR Mus musculus 50 Larp5 ENSMUSG00000033499 ENSMUST00000091829,ENSMUST00000038260 1 2 3 88 13 9168173 9168191 AAACTCAGAGTGTGGACAG 59 9168243 9169906 TCTCAATTCTGTTGCTGCT 59 NA Mus musculus 50 Cdc14a ENSMUSG00000033502 ENSMUST00000090464 2 1 2 81 3 116095793 116095812 GAAGATAGTGCACTACACCT 58 116069616 116095749 GTAGATGACGGCATAAGCA 59 NA Mus musculus 50 Hisppd2a ENSMUSG00000033526 ENSMUST00000110628 2 1 10 120 2 121162905 121162923 GAAAGTGGAGATTGCTGTG 58 121162501 121162821 GTGAACATGACTCTCAAGG 57 NA Mus musculus 50 Igf2bp2 ENSMUSG00000033581 ENSMUST00000100052,ENSMUST00000115379 2 2 3 115 16 22089168 22161321 AAGGAGCAGAAGAATCCAG 58 22084049 22087608 TATCTGTGTTGACTTGCTCC 59 NA Mus musculus 50 Pank1 ENSMUSG00000033610 ENSMUST00000036584,ENSMUST00000112460 3 2 2 162 19 34895708 34896215 CTGTAGCATCAAGCTTTGG 58 34888282 34888301 CCAACAAACACAACTCTGTC 59 NA Mus musculus 50 Pla2g4b ENSMUSG00000033852 ENSMUST00000044675,ENSMUST00000110761,ENSMUST00000110759 1 3 4 82 2 119857067 119857085 TGTACTGTGTAGTCTCTGG 57 119857130 119857321 TGTGTAGAGATTGTAAGGGA 57 NA Mus musculus 50 Myo15b ENSMUSG00000034427 ENSMUST00000093911 2 1 2 83 11 115749341 115749359 CATCCAGGAATCCCTTACC 59 115749406 115749741 ATAAACTGCATCAGAGCCT 58 NA Mus musculus 50 Cobll1 ENSMUSG00000034903 ENSMUST00000112431,ENSMUST00000102726,ENSMUST00000072921,ENSMUST00000112422,ENSMUST00000068356 2 5 9 63 2 64943808 64943826 GATGAAATCTCTGAGGGCC 59 64941443 64943781 TTACACCAGAGGTCAAGGA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 A930041I02Rik ENSMUSG00000035236 ENSMUST00000038874 3 1 2 91 2 38980696 38988483 TGGCTTAAGAGATTTGCCT 58 38980623 38980642 GGAATTTCCAGAGTTTGGTG 59 NA Mus musculus 50 L3mbtl ENSMUSG00000035576 ENSMUST00000035751,ENSMUST00000109436 2 2 2 82 2 162774298 162774316 CTCAACAAAGTAGTGGCCT 59 162774362 162774521 CTCTACTATGACTGACCGC 58 NA Mus musculus 50 Oxsr1 ENSMUSG00000036737 ENSMUST00000040853 3 1 2 90 9 119203631 119213930 AGCTCCTGAAAGAAATCCA 58 119203559 119203577 CACAGCTCATCCTTTACCA 59 NA Mus musculus 50 Ehmt1 ENSMUSG00000036893 ENSMUST00000102938,ENSMUST00000046227,ENSMUST00000114418,ENSMUST00000114432,ENSMUST00000091348 3 5 5 82 2 24647970 24657041 GATCTTGACAATAAGGATGGAG 58 24647909 24647927 CAGTGGTGGTTTATGAACC 58 NA Mus musculus 50 Arhgap10 ENSMUSG00000037148 ENSMUST00000035678 3 1 3 199 8 79834638 79834656 ACAACCTTTGTCTTGAGCT 59 79781304 79801052 TCGATTGATAACGGTGGTG 59 NA Mus musculus 50 Sirpa ENSMUSG00000037902 ENSMUST00000099113 3 1 5 81 2 129434932 129434950 GAAAGGATCATCAGAGCCT 58 129434993 129444209 GTGGGTAGCATTATTATCGAG 58 NA Mus musculus 50 Mical2 ENSMUSG00000038244 ENSMUST00000106648 2 1 3 210 7 119475541 119490241 AGTCGTGAAACAGGAATCC 59 119490415 119490433 CCTAGGGTTACCTTCATCG 58 NA DesignRelaxed Mus musculus 50 Rbbp7 ENSMUSG00000038344 ENSMUST00000041370,ENSMUST00000112316,ENSMUST00000112314,ENSMUST00000112315 1 4 4 204 X 159235738 159245431 AAATATGCTGATCTCCTGGA 58 159228720 159228738 CCTGCTGCATATTCTCCTC 59 NA DesignRelaxed Mus musculus 50 Nudcd1 ENSMUSG00000038736 ENSMUST00000066292 3 1 2 64 15 44252265 44252284 TGAACTTAACAGTGATGCTG 58 44246289 44246309 CTACAAGAGAAAGCTTCTCTG 58 NA DesignNoJunction Mus musculus 50 Lmx1b ENSMUSG00000038765 ENSMUST00000041730,ENSMUST00000113150 3 2 2 80 2 33422839 33424578 CTGACTCTGTGAAGAGTGAG 59 33422778 33422796 CTCCACTGCCTTTACTCTG 59 NA Mus musculus 50 Tasp1 ENSMUSG00000039033 ENSMUST00000099304 3 1 3 89 2 139772950 139772968 GCTCTTTATGGATGTGGCT 59 139709605 139772897 AAGGAAAGGTGAACCTGAG 59 NA Mus musculus 50 Adrm1 ENSMUSG00000039041 ENSMUST00000061437,ENSMUST00000040492 2 2 2 60 2 179906903 179906923 CCCTTATTCACTTCTGTTGGA 59 179906943 179907571 ATAATCAAGTCATCCTCCACG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 C330006K01Rik ENSMUSG00000039623 ENSMUST00000110792 3 1 2 112 5 142943638 142943656 TTCAAGATCCTCGAGAACC 58 142943731 142945970 GACTTGTCATCTTCCATGAG 57 NA Mus musculus 50 Mrap ENSMUSG00000039956 ENSMUST00000038197 2 1 1 74 16 90747827 90747845 CATCCTGCTCTACATGTCC 59 90749490 90749508 CATGAACATATTGGCTGGG 58 NA DesignNoJunction Mus musculus 50 Ythdf2 ENSMUSG00000040025 ENSMUST00000102570,ENSMUST00000040654 2 2 2 60 4 131766682 131766702 GATTTCGAACCTTACTTGAGC 59 131761606 131761624 CTGACATGGCAGTATATGC 58 NA DesignNoJunction Mus musculus 50 Dtx3 ENSMUSG00000040415 ENSMUST00000116230,ENSMUST00000038217,ENSMUST00000116229 3 3 3 162 10 126630403 126630793 GGATCAAATGTCGTTCGTC 58 126630259 126630277 GCCATCTATGAGGATGGAC 59 NA InUTR Mus musculus 50 Mtap7d2 ENSMUSG00000041020 ENSMUST00000112471,ENSMUST00000058145,ENSMUST00000043151,ENSMUST00000112470,ENSMUST00000087141 3 5 5 120 X 155907914 155907934 ATCTTCATACAAGTCCTCTCC 58 155908016 155910765 TTTCTCCATCTGTGAAGGC 59 NA InUTR Mus musculus 50 Abcb4 ENSMUSG00000042476 ENSMUST00000003717 1 1 2 80 5 8920449 8927777 ACAGAGGGTAAGATTAGCA 57 8927821 8927839 TACCACACCAATGATTTCC 57 NA Mus musculus 50 A830053O21Rik ENSMUSG00000044243 ENSMUST00000056184,ENSMUST00000104940 2 2 2 117 11 76486379 76486397 TCACTGCTCTATCCTTGGT 59 76486478 76486496 ACACTGAAGCTGGAATTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 A330102K23Rik ENSMUSG00000044647 ENSMUST00000112397,ENSMUST00000112395,ENSMUST00000053910 2 3 4 115 2 65716101 65787026 GATCTCAAGGTACATGTGAC 57 65787104 65787122 GACTTCATCATCCGATTCC 57 NA Mus musculus 50 Palb2 ENSMUSG00000044702 ENSMUST00000098068,ENSMUST00000106468 1 2 4 101 7 129268434 129270576 CGTGGTTATTCATGACTTTGAG 59 129268354 129268373 GAGTCAGGAGACTCAATCAG 59 NA Mus musculus 50 Olfr649 ENSMUSG00000044899 ENSMUST00000106859,ENSMUST00000060440 2 2 2 60 7 111338300 111338319 ATACCACTATTCTCACACCC 58 111338259 111338277 CTTCGGAAAGAGATTCCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 1110034G24Rik ENSMUSG00000044991 ENSMUST00000061891,ENSMUST00000110132 2 2 2 82 2 132517858 132575960 ACTGATCCAGATAGCAATTCTC 59 132576003 132576021 TTCGAAGAAGGATCAAGCC 59 NA Mus musculus 50 St7l ENSMUSG00000045576 ENSMUST00000106769,ENSMUST00000059271,ENSMUST00000098765 1 3 3 81 3 104725185 104729354 GAGCTATTGCCTACTTTCCA 59 104729398 104729416 ACAGTCCTGCTGTAAAGTG 59 NA Mus musculus 50 BB220380 ENSMUSG00000046207 ENSMUST00000060441,ENSMUST00000102613 3 2 2 80 11 68353502 68357110 CAAGGTTAAGATCTTCACCAG 58 68357151 68357170 TCTTGGATCTTCACCTTCAG 59 NA Mus musculus 50 Kctd4 ENSMUSG00000046523 ENSMUST00000050120,ENSMUST00000110892 3 2 2 60 14 76362731 76362750 CAAGAAGCAGAATTCTTCCA 58 76362773 76362791 TTTCCCACCTGGATTTCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700113H08Rik ENSMUSG00000047129 ENSMUST00000054229 3 1 1 60 10 86693124 86693143 TTTCCATAAGGCTTGTTCAC 58 86693164 86693184 GCAGTTAGTGTGAGTATTCAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc88b ENSMUSG00000047810 ENSMUST00000113440,ENSMUST00000080351 2 2 2 132 19 6923129 6923147 CAATGTGGAAGCACAAGAG 59 6922843 6923033 CAGTAGCATCTGAGCTCTC 59 NA Mus musculus 50 Ldlrad3 ENSMUSG00000048058 ENSMUST00000058790,ENSMUST00000111222,ENSMUST00000057414 1 3 3 60 2 101795323 101898073 AGTTCTCTAGAACCAGGCA 59 101795281 101795299 AGTACACAAGCTGGTTCTC 59 NA DesignRelaxed Mus musculus 50 Fbxl13 ENSMUSG00000048520 ENSMUST00000051358 1 1 2 86 5 20992187 20996214 GATGCCCAAAGATTACCGA 59 20992119 20992138 GGATACAGCCAGAGATATCC 58 NA Mus musculus 50 Zbtb45 ENSMUSG00000049600 ENSMUST00000051390 1 1 1 87 7 13592373 13592391 CACATGTTCATCCACTCTG 58 13591661 13591680 TATGCTTGAGCAGGTAATCG 59 NA DesignNoJunction Mus musculus 50 Zscan29 ENSMUSG00000050619 ENSMUST00000079024,ENSMUST00000110661 2 2 3 110 2 120995011 120995030 AGGGTGTATCCAAGAAAGAG 58 120992440 120994938 TAGGAAATGGAAATCCGCT 58 NA Mus musculus 50 Pgbd5 ENSMUSG00000050751 ENSMUST00000116406,ENSMUST00000052580,ENSMUST00000095165 3 3 3 129 8 126898334 126900019 GAGAAGCAAGGGATCTACTG 59 126898224 126898242 CCTTTGTCCTGATCTGGTG 59 NA Mus musculus 50 Pard3b ENSMUSG00000052062 ENSMUST00000075374,ENSMUST00000094906,ENSMUST00000046451 3 3 5 115 1 62212954 62212972 AACCCAAGAAGAACTCGTG 59 62213051 62245163 CAGGTTCTCCTTTCAGCTC 59 NA Mus musculus 50 D630039A03Rik ENSMUSG00000052117 ENSMUST00000063816 1 1 1 60 4 57923131 57923149 CCAGTGTCAAAGTCAGGAG 59 57923089 57923107 ATACTGAGCTCTAGAGCCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Glis3 ENSMUSG00000052942 ENSMUST00000065113,ENSMUST00000112612 1 2 2 81 19 28614744 28614762 CAAGCAGATCAGTCCTAGC 59 28606467 28614700 AATAACGGACCTGGTATCTG 58 NA Mus musculus 50 EG330513 ENSMUSG00000053742 ENSMUST00000108017,ENSMUST00000031488 1 2 2 136 7 46666127 46666145 CAACCAGAGAAGGTGATGG 59 46664779 46666027 ATCTCCATTTGAACCACGG 59 NA Mus musculus 50 EG330513 ENSMUSG00000053742 ENSMUST00000031488 2 1 2 96 7 46663718 46663736 GTGTTAAACATGCCAGGTG 59 46663638 46663661 GGATGGAGATACAATCTTTGTC 58 NA Mus musculus 50 Ubxd7 ENSMUSG00000053774 ENSMUST00000066414 3 1 2 81 16 32360150 32369407 CTTTGTTTGGTGTTAGGCA 58 32369452 32369470 AATAGATCTGCAAGGGTGG 59 NA Mus musculus 50 Nudcd3 ENSMUSG00000053838 ENSMUST00000066496,ENSMUST00000109806,ENSMUST00000109805 1 3 3 104 11 6013319 6013337 CTACTGTGGATGAGGAGGA 59 6008346 6013251 TCTCATGGACTTTCAGCTC 58 NA Mus musculus 50 Slc8a1 ENSMUSG00000054640 ENSMUST00000078779 1 1 4 80 17 81844251 81844269 AAAGAGTGCAGTTTCTCCC 59 81841544 81841562 AAGCTCATTCAACAACAGG 58 NA DesignNoJunction Mus musculus 50 OTTMUSG00000016300 ENSMUSG00000056061 ENSMUST00000069943 1 1 1 210 2 180068629 180068647 TCGGAACTCATGTATGCTG 59 180073939 180073957 TAGTCCAGTTGACATGTGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Fry ENSMUSG00000056602 ENSMUST00000087204 1 1 3 80 5 151207555 151207573 GTTCTCTTCAAGGCCTCTG 59 151207617 151207833 TTCGAGGATGATACATGCC 59 NA Mus musculus 50 Lepr ENSMUSG00000057722 ENSMUST00000084387 1 1 4 84 4 101445574 101445592 CCTATACGCTTGTCATGGA 58 101446845 101452712 CATGAGAAGGTAAGGTCCC 59 NA Mus musculus 50 Unc13d ENSMUSG00000057948 ENSMUST00000106450,ENSMUST00000106451,ENSMUST00000075036 1 3 4 80 11 115931066 115931084 AAATCTGGTACAGGACGTC 58 115930920 115931022 ATCTTGAGGACATTGTGGA 58 NA Mus musculus 50 Nrf1 ENSMUSG00000058440 ENSMUST00000115212,ENSMUST00000115211,ENSMUST00000115206,ENSMUST00000115209,ENSMUST00000115200,ENSMUST00000115199,ENSMUST00000069808,ENSMUST00000069831,ENSMUST00000004761 3 9 10 80 6 30066223 30066242 CTCATCTCGTACCATCACAG 59 30066285 30067065 CTGTACCAACCTGGATGAG 59 NA Nonspecific Mus musculus 50 Sept9 ENSMUSG00000059248 ENSMUST00000093907,ENSMUST00000106351,ENSMUST00000106354,ENSMUST00000019038,ENSMUST00000106352,ENSMUST00000100193,ENSMUST00000106349 2 7 7 82 11 117213583 117213931 TCACCCACGATATTGAAGAG 59 117213976 117213994 ATTGTTGATGTGGTCTCCG 59 NA Mus musculus 50 Ppp2r5d ENSMUSG00000059409 ENSMUST00000075149 1 1 2 131 17 46821308 46821455 GTACCCTATGTTTCGGCTC 59 46821060 46821212 TGATGTCCTTCAGCATCTG 59 NA Mus musculus 50 Dmkn ENSMUSG00000060962 ENSMUST00000054427,ENSMUST00000085691 2 2 4 183 7 31550324 31550342 TCATGGCAGTAATGGTCAG 59 31550489 31551506 AGATGTTTCTATGTCCCGG 58 NA Mus musculus 50 9330158F14Rik ENSMUSG00000061171 ENSMUST00000112420,ENSMUST00000112419,ENSMUST00000112418,ENSMUST00000052111 3 4 6 88 2 65191881 65191899 GGCACTTCATTATTGTGGT 57 65188166 65191830 GAAAGAGATCTTTCCAAGCT 57 NA Mus musculus 50 Akap6 ENSMUSG00000061603 ENSMUST00000110722 1 1 3 116 12 53988951 53988969 GAATGAGAGCCATTCTGCT 59 53989049 54012801 TTGTTCACAAACCCAACCT 59 NA Mus musculus 50 EG13909 ENSMUSG00000062181 ENSMUST00000074403 2 1 2 171 8 107615546 107616800 AAATACCTTCGAGCCTTCC 59 107617026 107617046 GTGATTCTAGACCAATCTCCA 58 NA Mus musculus 50 Brpf3 ENSMUSG00000063952 ENSMUST00000004985,ENSMUST00000038971 1 2 3 140 17 28965358 28965376 GAATGGAGACTCTGACCAC 59 28968352 28972720 TTGGGATCGATGATCAAGG 59 NA InUTR Mus musculus 50 Dnahc12 ENSMUSG00000064221 ENSMUST00000073309 1 1 1 74 14 27585848 27585868 CTAGACTATCTAGCAATGGGA 57 27586144 27586162 GAACTCATCAAAGCAAGCC 59 NA DesignNoJunction Mus musculus 50 OTTMUSG00000010009 ENSMUSG00000066031 ENSMUST00000085144,ENSMUST00000084194 3 2 3 80 4 143383992 143384639 TGAAAGAATACCTCAGGTGC 59 143384682 143384700 CCAAGTCTGACTGTGAGAG 59 NA Nonspecific Mus musculus 50 Irx6 ENSMUSG00000066273 ENSMUST00000106910,ENSMUST00000084817 1 2 3 60 7 109862883 109862903 TCAATATCACCTTCTTCCAGC 59 109862843 109862861 AACTCTAGTCCTGGTATGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp575 ENSMUSG00000066721 ENSMUST00000094705 2 1 1 76 7 25372208 25372226 AGAGATGCGATTTAGCGAC 59 25371810 25371828 CAAGTTCATGGAGACAGGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Tnfrsf13c ENSMUSG00000068105 ENSMUST00000089161,ENSMUST00000109534 1 2 3 60 15 82054158 82054176 CCAGACACTTCAGAAGGAG 59 82053674 82053692 CTGAGGAGGGTACAAAGAC 58 NA DesignNoJunction Mus musculus 50 Uty ENSMUSG00000068457 ENSMUST00000069309 3 1 2 80 Y 471423 473303 AGTAGAATACCAGGTCACCA 59 471362 471381 AAACCATTCACAATCACCTG 58 NA Mus musculus 50 Tia1 ENSMUSG00000071337 ENSMUST00000113713 1 1 4 109 6 86363889 86366303 ATGGATGTAAGGACAGCAG 59 86366376 86366394 TTACCCATTATCTTCCGCC 59 NA Mus musculus 50 Tufm ENSMUSG00000073838 ENSMUST00000098048 1 1 2 88 7 133633138 133633156 TAAAGCGCGAAGATTTGAG 58 133633208 133633314 GATATAAACCTGGGCCTCC 59 NA Nonspecific Mus musculus 50 Fbxw15 ENSMUSG00000074060 ENSMUST00000056745 1 1 2 80 9 109460812 109462245 CCCAATTGTCTTGATAGGTG 58 109460751 109460769 TTGACTGTGGAAATGAGGT 58 NA Mus musculus 50 D630002G06Rik ENSMUSG00000075044 ENSMUST00000096271,ENSMUST00000113298 3 2 2 86 19 8267949 8267967 CCCAGAAGGGATTAAAGGA 58 8244526 8267899 TTCTCACAATCTCCATGGT 58 NA Mus musculus 50 Wipf1 ENSMUSG00000075284 ENSMUST00000094681,ENSMUST00000102680,ENSMUST00000102679 1 3 3 90 2 73282624 73285916 CATTTGCACTCGCTAACAC 59 73282552 73282570 TTCCCTTTGCTGATGTCAG 59 NA Mus musculus 50 OTTMUSG00000012686 ENSMUSG00000075425 ENSMUST00000113810,ENSMUST00000113809,ENSMUST00000113808,ENSMUST00000100229 1 4 4 80 2 29619002 29619022 ATTAGTCGGGTATCACTTCAG 59 29619309 29619427 AGTCGATGAGAAAGTCTTGG 59 NA Mus musculus 50 A2ARL5_MOUSE ENSMUSG00000078875 ENSMUST00000108976 2 1 2 60 2 176794732 176794751 AGAACATACGATTGAAGACC 57 176794774 176795947 ACTTCTTTCATGCCTTCCA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 1700003O11Rik ENSMUSG00000079589 ENSMUST00000114800 2 1 1 73 18 76175047 76175065 GACTGATCCCTTTACCAGC 59 76174107 76174125 TCTCACTTCAGCTTGAAGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 MGI:2147116 ENSMUSG00000079729 ENSMUST00000115767 3 1 1 71 17 6825267 6825285 GTATCATGGGATACGGGTC 58 6825048 6825068 CCAACAATGAAGAACTTAGGC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 TRAJ39 ENSMUSG00000076891 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Pcp4 ENSMUSG00000000159 ENSMUST00000061739 3 1 3 101 16 96715463 96747004 CAGGAGATAATGATGGGCAG 59 96747068 96747086 TGAACTGAGACTGAATGGC 59 NA Nonspecific Mus musculus 50 Zfp385a ENSMUSG00000000552 ENSMUST00000087898 3 1 1 119 15 103150826 103163508 CAACTACAGCACAATGGAC 58 103150725 103150743 GAATTGAAGCGGATCTGAC 58 NA Mus musculus 50 Scn4a ENSMUSG00000001027 ENSMUST00000106818,ENSMUST00000021056 3 2 2 85 11 106210069 106210088 CATGATCACCATCTTGACCA 59 106209701 106210021 CTGTGAAGGTGTACTCCAC 59 NA Mus musculus 50 Luzp1 ENSMUSG00000001089 ENSMUST00000105849,ENSMUST00000001116,ENSMUST00000063021 3 3 4 60 4 136096868 136096889 GAAAGAGCTAGAATCTTCAGAG 58 136096909 136096928 TTCTGACACTAAACTCTGCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Napsa ENSMUSG00000002204 ENSMUST00000002274 3 1 1 82 7 51840726 51841095 ATGGGCAGTACTTCATTCAG 59 51841139 51841158 GAGGTTAAACCAGACTCCAC 59 NA Mus musculus 50 Ccdc97 ENSMUSG00000002608 ENSMUST00000002683 3 1 1 179 7 26499495 26499781 GTGATGAGGAAGACCAGAG 59 26498095 26498113 TGTCCAGGTTGTCAAAGTC 59 NA Mus musculus 50 Cd36 ENSMUSG00000002944 ENSMUST00000082367 1 1 1 80 5 17302991 17304056 ACATTTGCAGGTCTATCTACG 59 17302931 17302952 CTGGAAGAACAAATCTGTACAC 59 NA Mus musculus 50 Sri ENSMUSG00000003161 ENSMUST00000088786,ENSMUST00000003245 3 2 2 81 5 8063338 8063358 ATCAGTTTCGATAGCGATAGG 59 8063400 8063648 TCAACCTGAATCCCATAGTC 58 NA Mus musculus 50 Ccdc65 ENSMUSG00000003354 ENSMUST00000003444,ENSMUST00000109145 2 2 3 118 15 98538959 98539495 TTCTTGAAGGACAAGTTGG 57 98539577 98539595 ATGTCTTGGTGAAGCTCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Grm3 ENSMUSG00000003974 ENSMUST00000004076 3 1 1 82 5 9504896 9511473 ATCAAGTGACTACAGAGTGC 59 9504833 9504851 CAAACAAACAGCCCAAGAC 59 NA Mus musculus 50 Cacna1b ENSMUSG00000004113 ENSMUST00000093372,ENSMUST00000041342,ENSMUST00000114447 2 3 7 93 2 24504064 24504417 GAACTACTTCAGAGATGCCT 58 24494722 24504009 GAAGTTGTTCGCTATCTCTG 58 NA Mus musculus 50 Gpx6 ENSMUSG00000004341 ENSMUST00000004453 1 1 1 80 13 21409529 21410755 TTCCTAAAGAACTCCTGCC 58 21410799 21410817 ATGAACCTTCATGGGATCC 59 NA Mus musculus 50 Ripk4 ENSMUSG00000005251 ENSMUST00000019386 2 1 1 60 16 97971743 97973113 ATGATGTATACAGCTTCGCC 59 97971702 97971720 GCAAATGGCTTCTTCTGTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Fcer2a ENSMUSG00000005540 ENSMUST00000005678,ENSMUST00000111036,ENSMUST00000074396,ENSMUST00000044741,ENSMUST00000111034 3 5 5 89 8 3683436 3683575 AAAGGAACAGGACTTCCTG 59 3683365 3683383 CATACAAACTCTCCCTCCA 58 NA Mus musculus 50 Tuft1 ENSMUSG00000005968 ENSMUST00000006123,ENSMUST00000107279 2 2 3 186 3 94439399 94442847 GGTTTACTTGAAAGGGAGGT 59 94436576 94438390 TAGTACCACCTGTATCTCCT 58 NA DesignRelaxed Mus musculus 50 Cdc20 ENSMUSG00000006398 ENSMUST00000006565 2 1 1 60 4 118108767 118108880 ATCCGGAATGACTACTACCT 59 118108726 118108744 CCACAGCCAATACATTTCC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Tmco6 ENSMUSG00000006850 ENSMUST00000007046 1 1 1 80 18 36898929 36898949 CAGTTCTTCCTTCAGAAACAG 58 36898991 36900719 AGTAGGACTGTTTGCAGTG 59 NA Mus musculus 50 Atp1a4 ENSMUSG00000007107 ENSMUST00000111243,ENSMUST00000007346 3 2 2 80 1 174181468 174181486 GACCTAGTAGAGGTGAAGG 57 174181126 174181424 ATTGTCTACCTTGCATCCT 58 NA Mus musculus 50 Dio2 ENSMUSG00000007682 ENSMUST00000082432 1 1 1 74 12 91968429 91976519 TAGATGCCTACAAACAGGT 57 91968373 91968391 ATTCAGGATTGGAGACGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cars ENSMUSG00000010755 ENSMUST00000010899,ENSMUST00000105909 1 2 2 86 7 150762623 150770562 CAAAGTACAGGTGTTGCTG 58 150762555 150762573 GAGTTGTCAGTCACCTCAC 59 NA Mus musculus 50 Pax5 ENSMUSG00000014030 ENSMUST00000107827,ENSMUST00000107826,ENSMUST00000014174,ENSMUST00000102932,ENSMUST00000107825 2 5 5 80 4 44692431 44695549 ACAGCATAGTGTCTACAGG 58 44692369 44692388 CACTGATGGAGTATGAGGAG 58 NA Mus musculus 50 Glis2 ENSMUSG00000014303 ENSMUST00000014447 3 1 1 83 16 4611600 4611618 AACAGGATGCTCGATACTG 59 4611664 4611767 GAATGAGCATCTTGTACCTG 58 NA Mus musculus 50 Wdfy2 ENSMUSG00000014547 ENSMUST00000014691 3 1 1 82 14 63570843 63571856 GACTAAGACAGCACCACTG 59 63571902 63571920 CATGAGTGGGATGGAAGAG 59 NA Mus musculus 50 Camta1 ENSMUSG00000014592 ENSMUST00000097774,ENSMUST00000049790,ENSMUST00000058864,ENSMUST00000105668,ENSMUST00000105670 3 5 6 87 4 150457845 150457864 GGTGGTGAATACAGAGATGG 59 150453975 150457798 CATGTTCACCTGAATATCATCC 58 NA Mus musculus 50 Edf1 ENSMUSG00000015092 ENSMUST00000015236 2 1 1 210 2 25415709 25416064 GACATCCAAGAAATGGGCT 59 25416506 25416524 ATAGTCTGCGATGACTTGC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Qdpr ENSMUSG00000015806 ENSMUST00000015950 1 1 1 80 5 45829127 45829147 GATGAACAGGAAATCAATGCC 59 45825903 45829085 CAGTCATGGAAGGTTTCCA 59 NA Mus musculus 50 Gsdma1 ENSMUSG00000017204 ENSMUST00000017348 1 1 1 97 11 98533063 98533619 AGTTCATATTGATCCAGGCA 58 98534339 98534357 CTTCTCCACTTCCTGAGTC 58 NA Mus musculus 50 Ctsa ENSMUSG00000017760 ENSMUST00000017904,ENSMUST00000103093,ENSMUST00000103092,ENSMUST00000109323,ENSMUST00000109319,ENSMUST00000109318,ENSMUST00000109321 3 7 7 80 2 164663582 164663600 TGGTGAATTTACAGTACCG 57 164663643 164664150 TCTGGTATTTCTGTGAACTG 57 NA Mus musculus 50 Eya2 ENSMUSG00000017897 ENSMUST00000063422,ENSMUST00000088132,ENSMUST00000103082,ENSMUST00000063433 3 4 4 121 2 165508372 165511058 CTCTTTGTGAAGTCTCATCCA 59 165511141 165511159 GTTGGGTACGCTGTATAGG 59 NA Mus musculus 50 Ltv1 ENSMUSG00000019814 ENSMUST00000019950 1 1 1 80 10 12898977 12898995 TCGTTCCAAAGATGAGACC 59 12898789 12898933 TCAACTCTTCGTTCCTTCC 59 NA Mus musculus 50 Uqcr ENSMUSG00000020163 ENSMUST00000020372 2 1 1 159 10 79866916 79866934 GGCAAGTTTAAGAAGGACG 58 79865795 79865813 TCTGTCAACATGGAAGCTC 59 NA DesignNoJunction, InUTR Mus musculus 50 Rnf130 ENSMUSG00000020376 ENSMUST00000054684,ENSMUST00000102776 3 2 2 117 11 49884890 49884909 GATCAGGTACACAAATGCTC 58 49899308 49900892 TGGGTCTGTTTCCTTATCG 58 NA Mus musculus 50 Patz1 ENSMUSG00000020453 ENSMUST00000093402,ENSMUST00000020731 1 2 7 85 11 3199195 3206295 CATCTGTAACCGAGGTCTC 59 3206344 3206362 TTTGTTGCCATAGGTCCTG 59 NA Mus musculus 50 Ccdc117 ENSMUSG00000020482 ENSMUST00000020776 1 1 1 80 11 5434819 5434837 AAATGGATCAGACAACTGG 57 5434373 5434775 CGTCAATTATCCTGTCCTC 57 NA Mus musculus 50 Butr1 ENSMUSG00000020490 ENSMUST00000108818,ENSMUST00000020792,ENSMUST00000069941 2 3 3 97 11 58732422 58732440 CTTCATCTTCCTGCAACTC 58 58732666 58732684 TGTCTTGACCAACTATGGC 59 NA DesignNoJunction Mus musculus 50 2310067B10Rik ENSMUSG00000020747 ENSMUST00000093912,ENSMUST00000103033 3 2 3 100 11 115649690 115649982 GATTGACAACATCAGATGGTG 59 115650044 115650062 CATAGTGAAGCATCACCGA 59 NA Mus musculus 50 1810032O08Rik ENSMUSG00000020812 ENSMUST00000021167 1 1 2 80 11 116535681 116536833 CTCTATCTGGTTATTGCCCTG 59 116536872 116536893 GACTCTTTGGGAAATTAAAGGC 59 NA Nonspecific, InUTR Mus musculus 50 Gucy2e ENSMUSG00000020890 ENSMUST00000108665,ENSMUST00000108664,ENSMUST00000021259 2 3 3 82 11 69049473 69049491 TTCCATGGAGACTTCAGAC 58 69049316 69049430 TGATCACTACTCTAACTCTAGG 57 NA Mus musculus 50 Tmem107 ENSMUSG00000020895 ENSMUST00000075980 3 1 2 68 11 68885984 68886002 GAATGTACCACGTACTGGT 59 68886259 68886278 TAATGCAGTTTCAGTGACAG 58 NA DesignNoJunction Mus musculus 50 Gstz1 ENSMUSG00000021033 ENSMUST00000063117,ENSMUST00000110166 2 2 2 80 12 88503978 88504662 ATGCTGAAAGGTTCAAGGT 59 88504706 88504724 AAACCTCTAAGGCTAGCAG 58 NA Mus musculus 50 Pygl ENSMUSG00000021069 ENSMUST00000110528,ENSMUST00000071250 2 2 2 89 12 71298096 71298219 ATAATTGGTGGCAAAGCTG 58 71298025 71298044 GTCATTGTTCACCACTTCTG 59 NA Mus musculus 50 Timm9 ENSMUSG00000021079 ENSMUST00000021486 2 1 1 81 12 72224669 72226462 TGAAACCTGAAGAGGTGAC 59 72224606 72224626 TGAAATCTCACGGATATCCTC 59 NA Mus musculus 50 Wdr21 ENSMUSG00000021222 ENSMUST00000021645 2 1 1 80 12 84880419 84880745 CATGTCTGGAAAGATCAAGC 58 84880788 84880806 GCGTACTCATTCACATGAC 58 NA Mus musculus 50 Entpd5 ENSMUSG00000021236 ENSMUST00000072061,ENSMUST00000110272,ENSMUST00000021662 1 3 3 80 12 85727980 85728000 GGAGATCTTCAAGAATTCACC 58 85727714 85727939 GCTAGTATGCCTTCATAGGA 58 NA Mus musculus 50 9330134C04Rik ENSMUSG00000021470 ENSMUST00000021926,ENSMUST00000095724,ENSMUST00000109778,ENSMUST00000067821 3 4 7 81 13 63936090 63942745 CTTAACAGTTTGGAATGGTCAG 59 63942787 63942805 TAACTTCTGTAACTCGGGC 59 NA Mus musculus 50 Pdlim7 ENSMUSG00000021493 ENSMUST00000046246,ENSMUST00000069968 2 2 4 261 13 55610333 55610353 GTACTGAATATTGACGGTGAG 58 55608975 55609576 TGAGCAACTGTCCATTCTG 59 NA DesignRelaxed Mus musculus 50 Dusp13 ENSMUSG00000021768 ENSMUST00000022290 1 1 1 218 14 22559493 22561898 GTTACAGCTAAAGAGAATGGAC 58 22554309 22554327 ATTAGACGACCCTTGTCTC 58 NA DesignNoJunction Mus musculus 50 Tgds ENSMUSG00000022130 ENSMUST00000022727 2 1 1 80 14 118516965 118516983 TGGACCACATCAGTATCCA 59 118515455 118516199 CCATGAATACAGCACTTCCT 59 NA Mus musculus 50 Fbxo4 ENSMUSG00000022184 ENSMUST00000022791 2 1 1 81 15 3925807 3925826 TTGGTGTTGAGTTTGATGTC 58 3921693 3925766 CAGATCCAATACCATCAATCTG 58 NA Mus musculus 50 BC036313 ENSMUSG00000022211 ENSMUST00000076236,ENSMUST00000111408 2 2 2 80 14 56116965 56117059 CAAGAAGAGGACTGTTCCC 59 56117103 56117121 GGCATTGATAAGGATGCTG 58 NA Mus musculus 50 1500005A01Rik ENSMUSG00000022217 ENSMUST00000022828 1 1 1 93 14 56200567 56200725 AAGAACTTAGTGATGTGGAGAG 59 56200495 56200513 CAAAGTCCACAAGATGCTG 59 NA Mus musculus 50 Twf1 ENSMUSG00000022451 ENSMUST00000023087 3 1 1 139 15 94416800 94416818 TTCATTGCATGGTCTCCAG 59 94414903 94415886 AATGATACGTCCTCCTTTACTG 59 NA Mus musculus 50 Bcl6 ENSMUSG00000022508 ENSMUST00000023151 2 1 1 97 16 23971564 23971582 GAGATGTGCCTCCATACTG 59 23970144 23971503 AAGAAGGTCCCATTCTCAC 58 NA Mus musculus 50 Cpox ENSMUSG00000022742 ENSMUST00000060077 1 1 1 80 16 58678094 58678113 CAAGTTTGGCCTCTTTACTC 58 58678156 58678794 ATGTACTCCCATCTTGCTG 59 NA Mus musculus 50 Muc13 ENSMUSG00000022824 ENSMUST00000115044,ENSMUST00000023520 1 2 2 81 16 33803175 33803193 TGCATAGCAAACACTTCTG 58 33803238 33804675 AATGTCGTTCCTTTCACAC 58 NA Mus musculus 50 1810007M14Rik ENSMUSG00000022974 ENSMUST00000023698 3 1 1 84 16 91019548 91022308 GTCGTCTGTTAAGCTATTGG 58 91019483 91019503 GCCATCTATTGATAACTCCTG 57 NA Mus musculus 50 Tlm ENSMUSG00000023737 ENSMUST00000067136 1 1 1 97 8 107186910 107186930 CCTTCTCTAATCAACAGAGGA 58 107186989 107187535 GCCAACCATTGAACAAGAG 59 NA Mus musculus 50 Slc25a27 ENSMUSG00000023912 ENSMUST00000024705 2 1 1 80 17 43801072 43801090 AATTGTTCAGGAGGAAGGC 59 43798635 43801028 CCTCCAGAGTACACTACGT 59 NA Mus musculus 50 Gtpbp2 ENSMUSG00000023952 ENSMUST00000024748 3 1 1 80 17 46301711 46301730 GTGGATTATGACAGTGACGT 59 46301771 46301943 ATCTAGGAACTGTTGGTTGTC 59 NA Mus musculus 50 Ehd3 ENSMUSG00000024065 ENSMUST00000024860 3 1 1 171 17 74165736 74169824 CTTCCTGAACAGGTTTGTG 58 74176532 74176551 GAGTAGGATAATTCGGTCCA 58 NA Mus musculus 50 Abca3 ENSMUSG00000024130 ENSMUST00000039013,ENSMUST00000079594 1 2 2 80 17 24545774 24545793 CATCCTAGAAGATGAGCACC 59 24545836 24546224 ATACCAAATACCTTGGCCC 59 NA Mus musculus 50 Gtf2a1l ENSMUSG00000024154 ENSMUST00000024970 2 1 1 91 17 89111777 89114232 TATGATAAGATCCACCGGAG 58 89114286 89114304 TTGGCAAATACGTAGTCTC 57 NA Mus musculus 50 Cuta ENSMUSG00000024194 ENSMUST00000114935,ENSMUST00000025027,ENSMUST00000114931 2 3 3 110 17 27075113 27075372 AGTTTGTTCGATCTGTGCA 59 27075021 27075039 AAACCGATTCTGTGACCTG 59 NA Mus musculus 50 Wdr33 ENSMUSG00000024400 ENSMUST00000025264 3 1 1 83 18 32045117 32045681 GGAGTATGATGACCTGGAG 58 32045727 32045746 TGCTCCATAGCTAACTTCAG 59 NA Mus musculus 50 Tnf ENSMUSG00000024401 ENSMUST00000025263 3 1 1 107 17 35338624 35338642 CTGTCTACTGAACTTCGGG 59 35337841 35338039 GAAGATGATCTGAGTGTGAGG 59 NA Mus musculus 50 Lox ENSMUSG00000024529 ENSMUST00000025409 1 1 1 85 18 52680550 52680904 TTCTAAAGGTCAGTGTAAACCC 59 52680486 52680504 TGTGTAGCGAATGTCACAG 59 NA Mus musculus 50 1700105P06Rik ENSMUSG00000024970 ENSMUST00000025924 1 1 1 81 19 7448824 7448842 ACCCATCCCTTCCTAAGAG 59 7448613 7448631 TTCCCTTGCTCTATGACAG 58 NA DesignNoJunction Mus musculus 50 Parp6 ENSMUSG00000025237 ENSMUST00000026267,ENSMUST00000050483 2 2 2 81 9 59497403 59497744 TTCTTTGTATATGAGGATGGGC 59 59497786 59497804 CACGCATGATTTCCTTCTG 59 NA Mus musculus 50 Usp33 ENSMUSG00000025437 ENSMUST00000073681,ENSMUST00000026507 3 2 2 80 3 152045941 152047085 ATAACCTCTATAGCAGGTATGG 58 152047125 152047144 TCTCTAACTCAATTTGGCAG 57 NA Mus musculus 50 Drd1ip ENSMUSG00000025468 ENSMUST00000026541 3 1 1 265 7 147256553 147257490 TACTTCGGCACAAGATCTG 59 147256306 147256324 GTCCAAAGACTTCCCTGAC 59 NA DesignRelaxed Mus musculus 50 Taf3 ENSMUSG00000025782 ENSMUST00000114906 2 1 4 158 2 9839825 9840383 GACTCAGATCCGTGATGAG 59 9838049 9838067 CACTGCATCTCTTCTGGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Rpe ENSMUSG00000026005 ENSMUST00000113995,ENSMUST00000027157,ENSMUST00000087314 2 3 3 84 1 66753088 66761158 ACCCTTTCTTTGATATGCAC 58 66761204 66761223 GTATATTGATTGGCACCTGC 59 NA Mus musculus 50 Smap1 ENSMUSG00000026155 ENSMUST00000027339 1 1 1 80 1 23860381 23865871 CTAGGACTTGATGGTCCTG 58 23860319 23860337 GTCCAGATCATCACTCAGG 59 NA Mus musculus 50 Xcl1 ENSMUSG00000026573 ENSMUST00000027860 1 1 1 81 1 166863087 166863105 GTGAACTTACAAACCCAGC 58 166862083 166863042 AAATTACAGCTCTCATGGC 57 NA DesignNoJunction Mus musculus 50 Traf5 ENSMUSG00000026637 ENSMUST00000085573 1 1 1 110 1 193882879 193882897 CATAGTGGTGACCAACCTG 59 193881085 193881863 TGTTCATTCACCCTAGCTC 58 NA Mus musculus 50 Suv39h2 ENSMUSG00000026646 ENSMUST00000027956,ENSMUST00000060618,ENSMUST00000100458,ENSMUST00000115062 3 4 4 86 2 3377150 3379763 TGAATCATAGTTGTGACCCA 58 3377083 3377101 AGAACAATGCTATCCTGGG 59 NA Mus musculus 50 4930571C24Rik ENSMUSG00000026963 ENSMUST00000028340 1 1 1 209 2 25143777 25143949 CTTCAGCTGGAACCTACTG 59 25144495 25144513 CTATGCGATCTTCCTGGAC 59 NA DesignNoJunction Mus musculus 50 Meis2 ENSMUSG00000027210 ENSMUST00000110907,ENSMUST00000028639,ENSMUST00000102538,ENSMUST00000110908,ENSMUST00000074285,ENSMUST00000020367,ENSMUST00000110906 1 7 7 87 2 115747461 115747479 GTACCCTTCAGAAGAACAG 57 115694524 115747410 TCTGGCATTGATAAACCAG 57 NA Mus musculus 50 U46068 ENSMUSG00000027485 ENSMUST00000081816,ENSMUST00000028987 2 2 2 81 2 154041044 154041064 GCTCAACTTCAATAACGTCAG 59 154041994 154042921 CTTCAGGACTTCAGGATCG 59 NA Mus musculus 50 Arfgap1 ENSMUSG00000027575 ENSMUST00000108862,ENSMUST00000108863,ENSMUST00000029092,ENSMUST00000098981,ENSMUST00000108861,ENSMUST00000108860,ENSMUST00000108859 2 7 7 89 2 180706782 180706800 GACACAGGACGACTATGAG 59 180706853 180707410 AAAGTAGCCACCTTATCCC 58 NA Mus musculus 50 Zbtb46 ENSMUSG00000027583 ENSMUST00000029106,ENSMUST00000087409 2 2 2 81 2 181146673 181158131 AGACTCAAATGTAGACCTGAC 59 181146612 181146631 GATGTGAGCATAGAGCTCTG 59 NA Mus musculus 50 Adad1 ENSMUSG00000027719 ENSMUST00000029274 1 1 1 80 3 37005118 37005136 TTTAATCTGCTTGCCAAGG 58 37005180 37010287 TCCAGACATACACTTAGCC 58 NA Nonspecific Mus musculus 50 Tnrc4 ENSMUSG00000028137 ENSMUST00000029784 2 1 1 147 3 94293394 94293414 CTTTGTGAGTTTCGACAATCC 59 94293523 94295066 GTATCTCCAGACCTGAAGC 59 NA InUTR Mus musculus 50 Oaz3 ENSMUSG00000028141 ENSMUST00000029787 1 1 1 80 3 94239063 94239890 AGAACTCTATTCAGCTGGG 58 94239001 94239020 TGGAAGTCTAACTGAACTGG 58 NA Mus musculus 50 Spaca1 ENSMUSG00000028264 ENSMUST00000108148,ENSMUST00000084734 2 2 3 106 4 34115525 34116053 ATCATCATAAATTGGGCGG 57 34112101 34112119 ATATCCTTGTCTTGTTCGC 57 NA Mus musculus 50 Glipr2 ENSMUSG00000028480 ENSMUST00000107855 1 1 2 103 4 43970640 43983384 AATCAGGAAAGGATGTGGC 59 43990336 43990354 TACCATGGCTGTAAAGTGC 59 NA DesignNoJunction Mus musculus 50 Osbpl9 ENSMUSG00000028559 ENSMUST00000030288,ENSMUST00000084365,ENSMUST00000106634 1 3 4 124 4 108829279 108829297 CACAATCACTGTCGATCAG 58 108775188 108806357 AATCCAAACCTTGAAGCTG 58 NA InUTR Mus musculus 50 Hcrtr1 ENSMUSG00000028778 ENSMUST00000030562 2 1 1 181 4 129813061 129813079 CACTGTTGTTCAAGAGCAC 59 129812619 129812916 GTAGAGTTCATCTGCCCAG 59 NA Mus musculus 50 Zfp362 ENSMUSG00000028799 ENSMUST00000071108,ENSMUST00000106072 2 2 2 109 4 128464216 128464234 AAGATCAAGGCAGAGAACC 59 128463427 128464145 CAGACCTTACACCTGTATGTC 59 NA Mus musculus 50 Mfn2 ENSMUSG00000029020 ENSMUST00000105716,ENSMUST00000030884,ENSMUST00000105715,ENSMUST00000105714 1 4 4 94 4 147257083 147257335 TATAAGAACGAGCTGCACC 59 147257007 147257025 ATAGTCTGCAGTGAACTGG 58 NA Mus musculus 50 Cpsf3l ENSMUSG00000029034 ENSMUST00000030901 1 1 1 82 4 155261300 155261550 AAGAACATGGTCATCATGC 58 155261596 155261614 ATTTCCAGTTTACGTTGCC 58 NA Mus musculus 50 Tas1r3 ENSMUSG00000029072 ENSMUST00000030949 3 1 1 84 4 155235482 155235501 GTAAAGGGCTTTCATTCCTG 58 155235242 155235435 TACAGGTGAAGTCATCTGG 58 NA Mus musculus 50 Stap1 ENSMUSG00000029254 ENSMUST00000031171 3 1 2 101 5 86510291 86513417 GAAGTGCATGTGAAGACAG 58 86515685 86515704 TAGAAGTGACACATGCTGAG 59 NA Mus musculus 50 Sult1e1 ENSMUSG00000029272 ENSMUST00000031201 1 1 1 86 5 88005335 88007512 TGCGAAAGGGAATTATAGGAG 59 88005269 88005287 TCATCTGCTGCTTGTAGTG 59 NA Mus musculus 50 Hyal6 ENSMUSG00000029679 ENSMUST00000031690 1 1 1 82 6 24690854 24693329 GGATACAAAGGAGACTTGC 57 24693375 24693393 CTGCCGATGTTACATTGAG 58 NA Mus musculus 50 Aass ENSMUSG00000029695 ENSMUST00000031707 3 1 1 80 6 23042567 23043906 CTTGTGATCAGCTTGTTGC 59 23042505 23042524 AGTGACCATATTAACCCTGC 59 NA Mus musculus 50 Nobox ENSMUSG00000029736 ENSMUST00000031749 3 1 1 83 6 43256403 43256726 CCAAAGAATCATGGTGTGG 58 43256338 43256358 CCATTCTTAGTTTCCTTCTCG 58 NA Mus musculus 50 Vamp1 ENSMUSG00000030337 ENSMUST00000100942 2 1 2 225 6 125169624 125169642 TATCTGTGCCATCATCGTG 59 125169831 125169849 GTCCATCAAGGAATGTCCT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 2900092C05Rik ENSMUSG00000030385 ENSMUST00000032541 1 1 1 84 7 13098189 13098207 AATCTTCTATGGGACAGCC 58 13098255 13100820 TTCACAGTTGGTCTAGGTG 58 NA Mus musculus 50 Mesp2 ENSMUSG00000030543 ENSMUST00000107394 3 1 1 61 7 86956603 86956621 GACACAATCCACTGAACCT 59 86956645 86957433 CTGGAGACACAGAAAGACTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mylpf ENSMUSG00000030672 ENSMUST00000032910 1 1 1 119 7 134357194 134357458 AAAGCAGTTCTTGGAGGAG 59 134357648 134357666 ATGTTCTTGTAGTCCACGT 58 NA Mus musculus 50 Magee1 ENSMUSG00000031227 ENSMUST00000033578 2 1 1 60 X 102318129 102318148 TACCAAAGAAGGGAATCCTG 59 102318171 102318189 AGATCAGGGAACACTTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Nek3 ENSMUSG00000031478 ENSMUST00000110730,ENSMUST00000033865 1 2 2 80 8 23242568 23242586 CAATGTCGAAGCTTTGGAG 59 23241794 23242524 TTTATCACAGACCCACCTC 58 NA Mus musculus 50 Pdgfrl ENSMUSG00000031595 ENSMUST00000034004 1 1 1 97 8 42023660 42023680 CTCTAGAGCTACGATGTAAGG 58 42023739 42062320 TTCACTCTGCTTCACAGTG 59 NA Mus musculus 50 Usp2 ENSMUSG00000032010 ENSMUST00000034508,ENSMUST00000114830,ENSMUST00000065461 1 3 3 80 9 43901319 43901864 CAATGATTCCAGTGTCACAC 59 43901906 43901925 CTGGCCAGTTCATAGAAGAG 59 NA Mus musculus 50 Abhd12 ENSMUSG00000032046 ENSMUST00000056149 3 1 1 81 2 150674184 150684105 TTAAATTTCGTGAGGGTTCC 58 150674122 150674140 GGTAGTAATTGCAGGTGTG 58 NA Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113685,ENSMUST00000050905,ENSMUST00000113684,ENSMUST00000030185 2 4 16 98 9 66878896 66879267 CTGAAGGAGGCTGAAACTC 59 66877530 66877548 TTTCTGAGCATACAGCTCG 59 NA Mus musculus 50 Smarcc1 ENSMUSG00000032481 ENSMUST00000035057,ENSMUST00000111971 1 2 5 206 9 110124653 110137391 CCAACCAGGTCAAATACCA 59 110139223 110139241 CTCAAGGGACTCCTTTGAG 59 NA DesignRelaxed Mus musculus 50 Deb1 ENSMUSG00000032526 ENSMUST00000035113,ENSMUST00000068330 3 2 2 60 9 121619791 121619811 TCGTGGAGTATCAGAATAAGG 58 121619832 121621700 TGTAACACATGCTGATACTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Uba5 ENSMUSG00000032557 ENSMUST00000035166 1 1 1 80 9 103951616 103951634 TGAAGAACTCTTCAGGTCC 58 103950007 103951572 AATCCTCCGTCTTCTTTGG 59 NA Mus musculus 50 Ppp1r9a ENSMUSG00000032827 ENSMUST00000035813,ENSMUST00000065842 3 2 2 100 6 5065124 5065144 TCGATTTCATCAAGAGACAGG 59 5065204 5065317 ATCTCTAATCCGAACTTGCAG 59 NA Mus musculus 50 AU040829 ENSMUSG00000033389 ENSMUST00000093002,ENSMUST00000093003,ENSMUST00000047463 3 3 4 80 11 64845204 64845222 CTTATCTCCGAGAGTTGCC 59 64840376 64845161 GCTCCTGGATATTAGAAGCC 59 NA Mus musculus 50 Mrpl15 ENSMUSG00000033845 ENSMUST00000045689,ENSMUST00000115538 1 2 2 97 1 4772805 4774040 AGGACATAGTTTCAGGCAC 59 4772726 4772745 GGTCAATAGGTTGAGTTGGA 59 NA Mus musculus 50 Rhbdd3 ENSMUSG00000034175 ENSMUST00000036320,ENSMUST00000101610,ENSMUST00000109878 2 3 3 158 11 5005705 5005806 CTGTGTCTTCTCTAAGGCTG 59 5005927 5005945 TACTCCTTCCCTCAGTCAC 59 NA Mus musculus 50 Polq ENSMUSG00000034206 ENSMUST00000039069,ENSMUST00000054034,ENSMUST00000071452,ENSMUST00000114798 1 4 4 93 16 37013363 37015176 GTTTATTCAGCTCCTACAAGTG 59 37015230 37015248 TAAACAACGCTTTCTTCCG 58 NA Mus musculus 50 Tmem30b ENSMUSG00000034435 ENSMUST00000042975 1 1 1 60 12 74646453 74646472 CAACATCACCTACAACTACC 57 74646412 74646432 GCTAAGAATGATGAGCTTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Bmp2k ENSMUSG00000034663 ENSMUST00000035635,ENSMUST00000112974 3 2 2 83 5 97460247 97465918 TGGAATATTGTCGAGCTGG 59 97465964 97465983 TTTGTAGGACTTCTGACTCG 59 NA Mus musculus 50 Tmem16h ENSMUSG00000034863 ENSMUST00000093450 1 1 1 83 8 74006077 74006190 TGACATGGAGAATTACCGG 59 74005906 74005924 TACGAGTTGACAAACTGGA 58 NA Mus musculus 50 Pcyt1b ENSMUSG00000035246 ENSMUST00000113933,ENSMUST00000045898 3 2 2 83 X 90965529 90965547 GGCTCACGATGATATTCCA 59 90965594 90977031 GTTGGAACAAACATGCCTG 59 NA Mus musculus 50 Pdzrn3 ENSMUSG00000035357 ENSMUST00000075994,ENSMUST00000101117 3 2 2 100 6 101105913 101106915 TAAGTGAGATTGACCCTAACAG 59 101104260 101104278 TTCACGGTTCTGTACTTCG 59 NA Mus musculus 50 Palm ENSMUSG00000035863 ENSMUST00000046945,ENSMUST00000105379 2 2 2 94 10 79269848 79270329 CAGTACCTGAAGTCCAAGG 59 79270386 79270405 ATCTGTTTCCTCATGTCCTC 59 NA Mus musculus 50 Zhx3 ENSMUSG00000035877 ENSMUST00000103112,ENSMUST00000103111,ENSMUST00000109460 2 3 4 120 2 160605222 160605240 CTATTCGGAGCTGTCTGAG 59 160597345 160605139 TCAAATTCAGTCTGCTTCGA 59 NA InUTR Mus musculus 50 Dnajb5 ENSMUSG00000036052 ENSMUST00000037872,ENSMUST00000098112,ENSMUST00000084662,ENSMUST00000107973 2 4 4 81 4 42966235 42966253 GTACGACCAGTATGGTGAG 59 42969437 42969456 AAAGGTGTAGTGAAAGGAGC 59 NA DesignNoJunction Mus musculus 50 Fmnl2 ENSMUSG00000036053 ENSMUST00000090952,ENSMUST00000049483,ENSMUST00000050719 2 3 3 80 2 52973262 52973901 ATCCTAGAGGACTTAAATGTGG 59 52973941 52973960 TGAAGAAAGATCAATGGCAG 58 NA Mus musculus 50 Ccdc38 ENSMUSG00000036168 ENSMUST00000048345,ENSMUST00000092215 3 2 2 112 10 93044564 93045197 AGAAGAAGTTGGGAAGACG 59 93045272 93045291 AAAGTACTCTTCGTCCTGTG 59 NA Mus musculus 50 Ng23 ENSMUSG00000036185 ENSMUST00000040151 3 1 1 104 17 35163712 35163730 ACTTTCTGATGGACTTGCA 59 35163390 35163644 GCTTTGACAACTCCTTGTG 59 NA Mus musculus 50 Leap2 ENSMUSG00000036216 ENSMUST00000036045 3 1 1 189 11 53236377 53236554 GGGTCAGGTCAATAGTTCC 59 53235906 53235924 GTATGGACATCACTCCTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Rab11fip3 ENSMUSG00000037098 ENSMUST00000075024,ENSMUST00000069854 3 2 2 88 17 26161402 26173542 GAAATGGAGATCCTGATGG 57 26161332 26161350 AAAGTCGTCAAACTCATCG 58 NA Mus musculus 50 Spag1 ENSMUSG00000037617 ENSMUST00000047348 3 1 1 81 15 36121855 36125141 ATTACACCAGGAGCTTATCAG 59 36125182 36125202 CATCTCTGCAACTTGATTTCG 59 NA Mus musculus 50 A930025D01Rik ENSMUSG00000037773 ENSMUST00000073989 2 1 3 99 2 130247680 130247698 CTCTCGCACTTACTTCTGG 59 130245043 130245061 GCACAAAGTTCATTCCAGG 59 NA DesignNoJunction Mus musculus 50 3110057O12Rik ENSMUSG00000037818 ENSMUST00000108078,ENSMUST00000108077,ENSMUST00000060415,ENSMUST00000076920 2 4 4 60 3 40720677 40720803 AGGAGACCATCATTACTGGA 59 40720825 40720844 GGCCTCCTTAATCATAGGAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 H2afz ENSMUSG00000037894 ENSMUST00000041045 1 1 1 96 3 137528514 137528532 AAATCTAGGACAACCAGCC 59 137528592 137528987 CCAACTCAAGTACCTCTGC 59 NA Nonspecific Mus musculus 50 Ndufv1 ENSMUSG00000037916 ENSMUST00000042497 1 1 1 80 19 4009528 4009838 CTCCAATTTGCAGGTAGCT 59 4009466 4009484 AAATCATAGTCGGAGCCAC 59 NA Mus musculus 50 C330043M08Rik ENSMUSG00000038022 ENSMUST00000053094,ENSMUST00000114365 1 2 2 82 6 55210562 55210580 TTGTCTTGTTTCCACCTCC 59 55210623 55212721 CTTTATCTCCTTAGCCAGTGAG 59 NA Mus musculus 50 Atp6v0a2 ENSMUSG00000038023 ENSMUST00000037865 2 1 1 83 5 125193137 125193156 TTTGTCATGTTCCTGTTTGC 59 125193201 125193463 CATCCTAAGGATCTCCTGTG 58 NA Mus musculus 50 Snx10 ENSMUSG00000038301 ENSMUST00000049152,ENSMUST00000114439 2 2 2 80 6 51529878 51529897 ATCTTGTGTACGAAGAAGGT 58 51529940 51530309 GGTAATTGTACCAGCAACG 58 NA Mus musculus 50 Spsb2 ENSMUSG00000038451 ENSMUST00000047760,ENSMUST00000112474,ENSMUST00000052727 1 3 4 83 6 124759920 124759939 CTATCCCTCTGTAAGTGCTG 59 124759985 124760302 GATTGTGGTTCCTCCACTC 59 NA Mus musculus 50 Grtp1 ENSMUSG00000038515 ENSMUST00000080568,ENSMUST00000081917 2 2 2 80 8 13186926 13186945 TCACGAAGAATGAAGAGGAG 59 13179738 13186885 TTGCTGGGCTATAGTAATCAG 59 NA Mus musculus 50 Atp6v0a4 ENSMUSG00000038600 ENSMUST00000040259,ENSMUST00000114908 1 2 2 80 6 38038658 38038676 GAAGAGCTTTCTGGAACTG 58 38038008 38038615 CCTAAGTTGGTTTCTGTCTC 57 NA Mus musculus 50 9130409I23Rik ENSMUSG00000038768 ENSMUST00000036819 1 1 1 97 1 182985564 182985582 CTTCAATGTGGGCTATCAC 58 182989819 182989838 TGTCATAGTATTCAGCTGCT 58 NA DesignNoJunction Mus musculus 50 Scgb1c1 ENSMUSG00000038801 ENSMUST00000035300 3 1 1 73 7 148032099 148032117 ATCGATGAACTACAGCCTG 59 148032506 148032524 TCCTCTTGAGCATCTAGCA 59 NA DesignNoJunction Mus musculus 50 Tbce ENSMUSG00000039233 ENSMUST00000039894 3 1 1 80 13 14098798 14100893 CATTTCTGAAAGGCCAGTG 59 14098736 14098755 TGGCTTTCATCAATTGATGG 58 NA Mus musculus 50 Synpo2l ENSMUSG00000039376 ENSMUST00000057090 2 1 1 93 14 21485933 21485952 GTTTCTTGCACCAACTTCTC 59 21485470 21485877 CATCTGTTACCCTCCTCAC 59 NA Mus musculus 50 AA536717 ENSMUSG00000039599 ENSMUST00000051915 1 1 5 199 14 21170594 21170612 TTCCTCTACCAACAACAGC 59 21175713 21177257 CTACCCAGAATCCTGAGGT 59 NA Mus musculus 50 Orai2 ENSMUSG00000039747 ENSMUST00000041048 3 1 1 60 5 136623939 136623958 TACCATTAGTCTTCCTAGCG 58 136623898 136623917 TGACACCTCTGTTCATACAC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ndufa4l2 ENSMUSG00000040280 ENSMUST00000035735 1 1 1 80 10 126953366 126953502 CAATGACCAGTACAAGTTCC 58 126953544 126953563 TCTCTGACTTAGAAGTCTGG 57 NA InUTR Mus musculus 50 Plekha4 ENSMUSG00000040428 ENSMUST00000051810 2 1 2 149 7 52787668 52787686 AAAGGAACAATGCACTTCG 58 52789765 52789885 CTCTGCTATCCTTATAGTAGAAGAG 59 NA Mus musculus 50 Mybbp1a ENSMUSG00000040463 ENSMUST00000045633 3 1 2 96 11 72262592 72262611 TTCAGCATCACTGGAATCTC 59 72262667 72262774 CTTACAGATCACTGGGTATCTG 59 NA Mus musculus 50 Iqcc ENSMUSG00000040795 ENSMUST00000046675 3 1 1 97 4 129294421 129294616 AACAGTCGAAAGGAGTACC 58 129294342 129294360 GTCTTCTCATAGGCCTGTC 59 NA Mus musculus 50 Hectd2 ENSMUSG00000041180 ENSMUST00000047247 3 1 1 80 19 36659419 36659437 TTGGAAGACAGTACATGCT 58 36659480 36659944 GTGGCATCTTTCTTAAATGC 57 NA Mus musculus 50 Bdkrb1 ENSMUSG00000041347 ENSMUST00000041229 2 1 1 61 12 106842768 106842786 CTGTTCATCAGCATCTTCC 58 106842811 106842829 TATACCAGCAACCTGTAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gcn1l1 ENSMUSG00000041638 ENSMUST00000064454,ENSMUST00000094427 1 2 2 92 5 116060090 116060108 CATCTCGATGTACGCTGAG 59 116060164 116060825 GAGCTGAACCGTATTCTCC 59 NA Mus musculus 50 Cox6a1 ENSMUSG00000041697 ENSMUST00000040154 3 1 1 60 5 115795897 115795915 TAACCATACCCTCTTCCAC 57 115795855 115795873 CTCATCTTCATAGCCGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hnrpf ENSMUSG00000042079 ENSMUST00000035493 1 1 1 106 6 117869161 117873727 TGTGGTGGTTCTTTAAGCT 59 117873797 117873815 TTGACCACATAGCCTTCAC 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 Obfc1 ENSMUSG00000042694 ENSMUST00000049369,ENSMUST00000099360 3 2 3 81 19 47582361 47584838 ATAAGCTGTACTACGTAACCAC 59 47582301 47582319 GGTTTCTGACAGTCTTCCT 58 NA Mus musculus 50 4930579E17Rik ENSMUSG00000043153 ENSMUST00000062041 1 1 1 80 12 37274535 37414842 AAACTACTCACAGGATGAGC 59 37414884 37414903 CTTTCCTTAACTAAGGCAGC 58 NA Mus musculus 50 1700012G19Rik ENSMUSG00000043445 ENSMUST00000053024 3 1 1 60 17 24608365 24608383 CCTGAAGACTATCCTGACC 58 24608406 24608425 CTGATTGCTCTTCACATCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mmp3 ENSMUSG00000043613 ENSMUST00000034497 1 1 1 80 9 7447584 7447602 GGACCAGGGATTAATGGAG 59 7447645 7449765 CAGGAATAGGTTGGTACCAG 59 NA Mus musculus 50 Tas2r118 ENSMUSG00000043865 ENSMUST00000062463 1 1 1 60 6 23919628 23919647 TTTGTCAATCATCCCTTCTG 57 23919587 23919606 ATCTAGGGTGACTAATTCCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Lsm8 ENSMUSG00000044155 ENSMUST00000056398 3 1 1 100 6 18799654 18801642 CAGAATGATTGTGGGAACAC 59 18801704 18801723 GTTCTACTCCCTGTGAAGAG 59 NA Mus musculus 50 Agtrl1 ENSMUSG00000044338 ENSMUST00000057019 1 1 1 60 2 84977625 84977644 GTGACTTTGACATCTTCCTC 58 84977667 84977685 TTGACATAACTGATGCAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Defb1 ENSMUSG00000044748 ENSMUST00000051017 3 1 1 60 8 22904986 22905007 CCATCTAATACCAAACTACAGG 57 22905028 22905046 AGCTCTTACAACAGTTGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000044941 ENSMUSG00000044941 ENSMUST00000060774 1 1 1 188 5 92471582 92471600 CAGAGAAACGAACTGAGGA 58 92471752 92471770 CTCAGCCAATCAGGATCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fut10 ENSMUSG00000046152 ENSMUST00000110527 1 1 2 85 8 32311968 32370381 TATTCTACGGGCTTACCAC 58 32370430 32370448 GATGAGAAGGTGAACAAGG 57 NA InUTR Mus musculus 50 Olfr1052 ENSMUSG00000047149 ENSMUST00000054746 1 1 1 65 2 86138834 86138853 CCATGATTTACAGTCTCAGG 57 86138880 86138899 ACTTCATCTCTATGGCTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rpl9 ENSMUSG00000047215 ENSMUST00000057885 2 1 1 83 5 65782082 65782192 AGAGAATGTCGAAATCACTC 57 65782018 65782036 ATGTGATTGAAGTCCCTCC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 4930408G06Rik ENSMUSG00000047383 ENSMUST00000054653 1 1 1 71 1 59060037 59060055 CTACAAGACCTCATCTCCG 58 59054445 59060004 CATGTATAGTTCTCCTTGCAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 BB014433 ENSMUSG00000049008 ENSMUST00000050493 2 1 1 60 8 15042698 15042719 CCTAAACAAGTTATCTGTGTCC 58 15042659 15042677 CACAAACACCTGGGATAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr844 ENSMUSG00000049229 ENSMUST00000054106 2 1 1 60 9 19123531 19123550 AATCAAGCTGTCATGTTCTG 58 19123571 19123591 GAAAGTTGCCAAGTATACCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 D130029J02Rik ENSMUSG00000050357 ENSMUST00000093200,ENSMUST00000062574 1 2 2 91 8 108219667 108220771 GGAAGCAAAGTAAAGACGG 58 108220952 108220970 CTTGATTGAGATGGGAGGG 59 NA Mus musculus 50 Olfr214 ENSMUSG00000051046 ENSMUST00000060204 2 1 1 60 6 116506640 116506659 CCGATGTACTTCTTCCTCAG 59 116506681 116506700 TAACGGTGGAGATGAAACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG226604 ENSMUSG00000051081 ENSMUST00000046662 3 1 1 81 1 168572355 168572374 AAATGATGGAGTACCTCAGG 58 168571884 168572312 ATATTGCACACGTTTGTCTG 59 NA Mus musculus 50 Crebzf ENSMUSG00000051451 ENSMUST00000061767,ENSMUST00000107206 1 2 2 88 7 97592530 97592548 GACAAGGATAAGGTGTCGG 59 97592600 97592618 GAGCAGATTACTTGACCCT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ccnb3 ENSMUSG00000051592 ENSMUST00000115752,ENSMUST00000056725,ENSMUST00000115753 1 3 3 80 X 6557423 6557442 AAACCATTTGCTGAACTTCC 59 6557079 6557383 ACTTCAAAGTAGGTCTCTTCAG 59 NA Mus musculus 50 Rnaseh2a ENSMUSG00000052926 ENSMUST00000109736,ENSMUST00000065049,ENSMUST00000109738 3 3 3 116 8 87489333 87489479 AAAGTGGCAGACTCTAAGAC 59 87489236 87489254 GATCAGGTTTGGAGACAGG 59 NA Mus musculus 50 Spag16 ENSMUSG00000053153 ENSMUST00000113940 3 1 3 251 1 69919816 69934074 TGTTGGGAAGATTTCTGGG 59 69970236 69970255 TTGGACTCTGTTGAAGATGG 59 NA DesignRelaxed Mus musculus 50 Fate1 ENSMUSG00000053593 ENSMUST00000066116,ENSMUST00000114569 2 2 3 80 X 69233070 69233364 CCTTATGAGTGTCTGGAGG 58 69233408 69233426 TCTCATGACTTCCATCTCC 58 NA Mus musculus 50 ENSMUSG00000053640 ENSMUSG00000053640 ENSMUST00000066196 2 1 1 60 1 42287780 42287798 ATCACAACATGGCTTTGAC 58 42287819 42287840 TAGGTCACCTTATACTCTACTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxw14 ENSMUSG00000054087 ENSMUST00000066901,ENSMUST00000112041 2 2 2 60 9 109187875 109188935 CCTATGGAGTTTGAATTTCGG 59 109187835 109187853 TTCTTGTTAAGCCATGCCT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 EG232599 ENSMUSG00000054556 ENSMUST00000067679 1 1 1 81 6 17027890 17037129 TTACTCTTTAAGGCTGGCC 59 17027827 17027845 AACAGACCTTGCTTGTCTC 59 NA InUTR Mus musculus 50 E130309D02Rik ENSMUSG00000054615 ENSMUST00000067765 1 1 1 60 5 144077359 144077377 CCCTCTTAACTGCTATGCT 58 144077400 144077419 ACCTTGTACTAAGATTCCCA 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Olfr1346 ENSMUSG00000054938 ENSMUST00000056144 2 1 1 60 7 6427655 6427673 TGCTGTCAGTCATCTACAC 59 6427696 6427715 CTCAAGCAGTAGATGATTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Snupn ENSMUSG00000055334 ENSMUST00000068856 1 1 1 85 9 56823044 56823062 ACAGTGAGGTGAATCAGAC 58 56823111 56825837 TCGGAAATCAGTCTGACAG 59 NA Mus musculus 50 E030030I06Rik ENSMUSG00000055657 ENSMUST00000069372 3 1 2 122 10 21868372 21868390 AGTACAGACCAGTGAGGAG 59 21864294 21864312 CTGAAACCTGAGCAAACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gsdmc4 ENSMUSG00000055748 ENSMUST00000063530 3 1 1 96 15 63726809 63729279 CACTTGTGTCATTCTCCCT 59 63726731 63726752 CTGATATCTTAGCGTTACAGGT 59 NA Mus musculus 50 Npm3 ENSMUSG00000056209 ENSMUST00000070215 1 1 1 134 19 45822753 45823037 CGTTTGTATAAACAACGACC 57 45822526 45822656 CAAGCAGTTACCTGATCAG 57 NA Nonspecific, InUTR Mus musculus 50 Lrrc48 ENSMUSG00000056598 ENSMUST00000094140,ENSMUST00000070805,ENSMUST00000108723,ENSMUST00000108722 2 4 4 91 11 60178527 60183984 TGATGAATATCATCTACCTGCG 59 60184036 60184054 CATCTTGTACTCCTCTGCC 59 NA Mus musculus 50 Hist3h2ba ENSMUSG00000056895 ENSMUST00000078267 1 1 1 102 11 58762803 58762821 AATACACCAGCTCCAAGTG 59 58762887 58762905 TTATTCAGGTAGCACGCTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Tas2r102 ENSMUSG00000056901 ENSMUST00000069268 3 1 1 60 6 132712579 132712600 GACTTAAACAACTGATTGTGGG 59 132712620 132712639 AGATTTCCAAGCAAGAACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp180 ENSMUSG00000057101 ENSMUST00000068975 2 1 1 130 7 24870484 24870502 CAAGATGATGAGTCCCTGG 59 24882910 24886480 AAGTCTGTGCTTTCCTGAG 59 NA Mus musculus 50 Rpl38 ENSMUSG00000057322 ENSMUST00000077915,ENSMUST00000106602,ENSMUST00000106599,ENSMUST00000082092 3 4 4 60 11 114530234 114530252 GGAGATCAAGGACTTTCTG 57 114530275 114533061 CTTGATCTTGACAGACTTGG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Zfp759 ENSMUSG00000057396 ENSMUST00000052716 3 1 1 106 13 67237684 67237703 TATTTCTCTGCAGAGGAGAG 58 67237771 67238255 GAAGCAAGACCTAGAAAGAC 57 NA Mus musculus 50 V1rc26 ENSMUSG00000057981 ENSMUST00000073384 2 1 1 90 6 57339733 57339752 TGCCTATCCCACAATTTCTC 59 57339662 57339680 CTAGTGGAACTTGGAGTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sept11 ENSMUSG00000058013 ENSMUST00000074733 3 1 1 82 5 93594341 93594359 GATGAGACAGATGTTCGTC 57 93594405 93596541 CGAACTTCTCATGAAGCTC 58 NA Nonspecific Mus musculus 50 Sh2d3c ENSMUSG00000059013 ENSMUST00000074248,ENSMUST00000113242,ENSMUST00000113240 3 3 3 109 2 32602657 32604681 TATAGCACTGTAACCCGAG 58 32604754 32604772 TTTCCAGGACATAGCTGAG 58 NA Mus musculus 50 Fcgr4 ENSMUSG00000059089 ENSMUST00000078825 3 1 1 83 1 172955915 172959271 GTATAAGCCTAGGCGATCC 59 172959318 172959336 ACAAGAGTCCTATCAGCAG 58 NA Mus musculus 50 Krt4 ENSMUSG00000059668 ENSMUST00000023797 3 1 1 80 15 101751747 101752151 CTCAAGAAAGATGTGGATGC 58 101751686 101751705 GTTGATCTCATCCTTAAGGC 58 NA Mus musculus 50 Giyd2 ENSMUSG00000059772 ENSMUST00000084586 1 1 1 86 7 133835498 133835516 TATCATCTGCTTGGCAGAG 59 133835326 133835448 GATTTCTTGCAGCTAGGAC 58 NA Mus musculus 50 Zfp74 ENSMUSG00000059975 ENSMUST00000108212,ENSMUST00000108211,ENSMUST00000108205,ENSMUST00000078457,ENSMUST00000032797,ENSMUST00000085782 2 6 6 186 7 30722711 30722976 AACTTAATCACAGTAGGCCC 59 30720988 30721006 CACTCGTCACCACTATTCC 59 NA Mus musculus 50 Olfr1418 ENSMUSG00000060556 ENSMUST00000079875 1 1 1 60 19 11929710 11929729 CCTTCTCTACCTGTTCTTCC 59 11929669 11929688 AGACTTGTGCATCCATACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NR_002688.1 ENSMUSG00000060795 ENSMUST00000079775 1 1 1 60 2 19914320 19914339 AATCACTGCTTCTTGTTAGG 57 19914362 19914380 GCTTGAGTAGAATTGGGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 NM_001105178.1 ENSMUSG00000061026 ENSMUST00000086298 2 1 1 60 7 10625777 10631329 AAGTAGAAAGATGCCATCCT 58 10625736 10625755 CAATCTTCTGAATCCAGGAC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 9330158F14Rik ENSMUSG00000061171 ENSMUST00000112420,ENSMUST00000112419,ENSMUST00000052111,ENSMUST00000112416,ENSMUST00000080413 2 5 6 80 2 65196237 65199394 ATACATCACAGACTTCTCCC 58 65196176 65196195 TTAACCAAAGACTGGTAGGA 57 NA Mus musculus 50 Taok3 ENSMUSG00000061288 ENSMUST00000111978,ENSMUST00000092889,ENSMUST00000111975 3 3 3 101 5 117722198 117722216 AATCAAGATGCAAACGGAG 58 117722280 117723692 TCCTCTTCAATCTTCTGCTC 59 NA Mus musculus 50 4931433A01Rik ENSMUSG00000061298 ENSMUST00000106592,ENSMUST00000106591,ENSMUST00000106587,ENSMUST00000097920,ENSMUST00000080744 1 5 6 106 4 110151184 110252665 TTGAAAGTGGTAACCTCGG 59 110252735 110252753 AAAGTTGAACCAGACTCGG 59 NA Mus musculus 50 Sec22c ENSMUSG00000061536 ENSMUST00000111560,ENSMUST00000078547 1 2 2 80 9 121599526 121602039 TTCTTGAGTTTGACAGTGTC 57 121599465 121599483 CTAAGCCACTCTTCATCTG 57 NA Mus musculus 50 Med9 ENSMUSG00000061650 ENSMUST00000081980 1 1 1 190 11 59761975 59774073 CAAATGCATGGACAAGGAC 59 59774227 59774245 TCTTGTACTTCTGCAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 BC031441 ENSMUSG00000062101 ENSMUST00000056147 2 1 1 159 17 56080678 56080696 CAAGAAGAATGGGCTTTGC 59 56079406 56080361 AGTTGATACACCTTCCATGTC 59 NA Mus musculus 50 ENSMUSG00000062561 ENSMUSG00000062561 ENSMUST00000079279 3 1 1 60 10 63389843 63389862 AAATAGCTGTTTGTCTGCCT 59 63389802 63389823 GTTGTAACTGTAATGGGTAGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp35 ENSMUSG00000063281 ENSMUST00000074941 3 1 1 80 18 24148879 24161156 CACTTTCTGTCAGATGGTG 58 24161200 24161218 TGTTCCAATCTTTCCTGTC 57 NA Mus musculus 50 Tnfrsf11b ENSMUSG00000063727 ENSMUST00000079772 3 1 1 84 15 54085812 54087549 TGTGGAATAGATGTCACCC 58 54085746 54085764 AAACACTCAGCCAATTTGG 58 NA Mus musculus 50 Arl9 ENSMUSG00000063820 ENSMUST00000071199 1 1 1 80 5 77436361 77436381 GCCAAGAAATACCTTCATCAG 59 77436422 77438494 AACAAACACCTGTTTGTTGG 59 NA Mus musculus 50 EG624367 ENSMUSG00000063885 ENSMUST00000081029 2 1 1 152 14 48820358 48847025 CATCTAAGGTTCCAGTATGAC 57 48847139 48847157 ATACTCAGTACCAGCATCG 58 NA InUTR Mus musculus 50 ENSMUSG00000063905 ENSMUSG00000063905 ENSMUST00000081471 1 1 1 73 13 65613682 65613700 AAGAACCCATACTGGAGAG 57 65613737 65613755 TGAGACTATTGTGACAGGA 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 4430402I18Rik ENSMUSG00000064202 ENSMUST00000025872,ENSMUST00000112602 2 2 2 80 19 29012897 29013632 ACATAAAGGTTATCCGAGAGC 59 29012837 29012857 TGGACTCACTTGAATCTACAG 59 NA Mus musculus 50 Tank ENSMUSG00000064289 ENSMUST00000078074,ENSMUST00000112501,ENSMUST00000112502,ENSMUST00000112495,ENSMUST00000112497,ENSMUST00000112499,ENSMUST00000112494 2 7 7 85 2 61465064 61465791 TAGTCGAGATAACAGTTATGGC 59 61465837 61465855 CATGTGGTTCATCAAGGGT 59 NA Mus musculus 50 Olfr1348 ENSMUSG00000066843 ENSMUST00000086318 1 1 1 96 7 6454932 6455033 ACTTGCTCAAGACAGATGG 59 6454854 6454872 TTATGTCCAGCCTAGTGGA 59 NA Mus musculus 50 Gm854 ENSMUSG00000066964 ENSMUST00000086615 1 1 1 197 5 113663544 113663562 CTTTGGGTCATTGAAGGAC 58 113667049 113667067 CCTACAAGCATGGAGACTG 59 NA DesignNoJunction Mus musculus 50 Xlr5c ENSMUSG00000067764 ENSMUST00000114503,ENSMUST00000088450 1 2 2 80 X 70532918 70533970 GGATTTCAAAGGTGATGATGG 59 70532858 70532878 CTGAAAGAGGCATTTACATCC 59 NA Nonspecific Mus musculus 50 Rnase12 ENSMUSG00000068407 ENSMUST00000089798 1 1 1 60 14 51676499 51676518 GTTTGTTCTTGTGACTTGTG 57 51676458 51676478 TTATTCCACATATCCCTGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tdpoz2 ENSMUSG00000068879 ENSMUST00000090853 3 1 1 96 3 93577001 93577019 ATTCTGCTATGAGTGGACC 58 93577079 93577097 CTCATTGGCCACTAAGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Sry ENSMUSG00000069036 ENSMUST00000091178 1 1 1 69 Y 1919310 1919328 AAAGTGTCACAGAGGAGTG 59 1919259 1919277 ACTGCAGAAGGTTGTACAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Prl2b1 ENSMUSG00000069258 ENSMUST00000091678,ENSMUST00000102954 1 2 2 80 13 27477152 27478260 CTAGTAAGAACTCCAGAAACAC 58 27477093 27477111 CACAAGATGATTCAGAGCG 58 NA Mus musculus 50 Q8BQR4-2 ENSMUSG00000070035 ENSMUST00000071888 2 1 1 78 7 79818812 79818933 TGTATAAGCCCGATGATGAC 59 79818974 79818992 GAAGGATCAAAGAGCAACG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mpzl3 ENSMUSG00000070305 ENSMUST00000114664 3 1 2 80 9 44878793 44882845 AGAGTGTCTGGATTCAGAC 58 44882889 44882907 TCCTGTTGTTAGGTGACAC 59 NA InUTR Mus musculus 50 Mpzl3 ENSMUSG00000070305 ENSMUST00000093856 1 1 2 62 9 44870237 44870255 AAGCTGACCATAGACTGGA 59 44870281 44870299 CACACTCACAGACTCTGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 NP_001093650.1 ENSMUSG00000070419 ENSMUST00000079268 3 1 1 96 5 146147907 146147925 TGAGGTTTGCTCTCATCAG 59 146147985 146151299 ATCTTCACAGGGATCTGTG 58 NA Mus musculus 50 Rgma ENSMUSG00000070509 ENSMUST00000094312,ENSMUST00000107458,ENSMUST00000107457 3 3 3 69 7 80554583 80554602 AAGTCACCAATACACCTGTG 59 80554634 80562219 TTGAAGATGATGGTGAGCT 58 NA DesignNoJunction Mus musculus 50 1700039E15Rik ENSMUSG00000070568 ENSMUST00000085364 1 1 1 82 7 52542445 52542587 TGGTACAAGTGCTTGTCTG 59 52542633 52542651 CAGGAATACCACGTAGCTG 59 NA Mus musculus 50 Tex24 ENSMUSG00000071138 ENSMUST00000095375 2 1 1 82 8 28456356 28456377 GGCGATGTACTTTATTGAAGAG 59 28456420 28459049 GTTCCTGTATTGTGCTCGA 59 NA InUTR Mus musculus 50 3830408C21Rik ENSMUSG00000071181 ENSMUST00000095459 3 1 1 61 13 107822580 107822599 TTTCTTTCCTGGTCTGTCAG 59 107822623 107822641 CCTGTCATTCAGGACTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr42 ENSMUSG00000071522 ENSMUST00000096006 2 1 1 60 13 21225018 21225036 GCTATTTGTAAGCCCTTGC 59 21225060 21225078 TCATCTTGACGCATAGACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Atf7 ENSMUSG00000071584 ENSMUST00000096143 1 1 1 60 15 102359154 102359174 CATTTAGCAGTTATCACCCAG 58 102359114 102359133 CAGTATATGTCAGGGCAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mta2 ENSMUSG00000071646 ENSMUST00000096240 2 1 1 80 19 9018006 9018506 TTGAGGAGCTCAATAAGACTG 59 9018546 9018566 TACTAGAAATATCCCTTCGCC 58 NA Mus musculus 50 Gm1679 ENSMUSG00000072754 ENSMUST00000100924 2 1 1 157 5 110783615 110783633 CAGTGTATATCTTGGCGCA 59 110783862 110784882 TTGTTCATTCAGACTGGCA 59 NA InUTR Mus musculus 50 ENSMUSG00000072963 ENSMUSG00000072963 ENSMUST00000084653 3 1 1 62 11 53270030 53270048 TTATGTGCTCGAATCTGCT 59 53269986 53270005 GGAGTTCAAAGTCTTTACCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 EG331493 ENSMUSG00000073010 ENSMUST00000101296 1 1 2 80 X 103904164 103904425 AGATTAAAGGAATCCTGCCC 59 103904468 103904486 TTGAACATCAGGTACCTGC 59 NA InUTR Mus musculus 50 F830208F22Rik ENSMUSG00000073529 ENSMUST00000097515 2 1 1 60 18 78032967 78032986 CTATCGCTACAAGGAATGGA 58 78032926 78032945 TAGACTAAAGCCTGCAATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 9630014M24Rik ENSMUSG00000073576 ENSMUST00000097595 1 1 1 89 18 38777382 38777400 CAGGTTCAGGAAGAGACAG 59 38802063 38802081 CTGAAATGTCAAAGGACCC 58 NA DesignNoJunction Mus musculus 50 ENSMUSG00000073656 ENSMUSG00000073656 ENSMUST00000097706 1 1 1 112 1 66370309 66372675 GAATCATGTATGGTTGAGCC 58 66370216 66370234 CACAAGCATTGCTGAAGAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Lphn1 ENSMUSG00000074219 ENSMUST00000098595 2 1 1 61 8 86457558 86457576 GGACTTCAGGTAGGTTGAG 58 86457515 86457533 CATCTTTACTGTAGCCCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000074508 ENSMUSG00000074508 ENSMUST00000098984 3 1 1 133 9 14509106 14509124 CAGAAACAGATCTGCACTG 58 14513788 14521269 CATCTTGGAATCAGATGCC 58 NA InUTR Mus musculus 50 Gm1332 ENSMUSG00000074628 ENSMUST00000099140 2 1 1 90 2 156915002 156917374 AGGATGGACAGATGTTTGG 59 156917427 156917446 AAGGAGAAGAGGAATGTCTC 58 NA Mus musculus 50 Hist1h2bb ENSMUSG00000075031 ENSMUST00000099703 2 1 1 75 13 23838710 23838728 AGAAAGCCATCTCTAAGGC 59 23838767 23838785 TACACCGAATAGCTCTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1155 ENSMUSG00000075145 ENSMUST00000099843 1 1 1 60 2 87783553 87783572 CAGATTTCTGCTATTCCTCC 57 87783512 87783531 TCTTCTACAACAAGGTTCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000075538 ENSMUSG00000075538 ENSMUST00000100426 3 1 1 61 2 6855198 6855216 TCTGAACAAGCACTCATGG 59 6855155 6855173 TTGCTACTTTGTGACATGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000001969 ENSMUSG00000075589 ENSMUST00000100525 2 1 1 150 11 96197895 96200317 GAGTTGAGAGGGTTTGGAG 59 96197763 96197781 GGAGGGTAATGGGTTTCTG 59 NA Mus musculus 50 mmu-mir-804 ENSMUSG00000076450 ENSMUST00000103251 2 1 1 60 11 50171348 50171367 CTTTGAGGTTACAACTTCCC 58 50171307 50171325 TGAGGAACAACTCACAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 mmu-mir-759 ENSMUSG00000076453 ENSMUST00000103254 3 1 1 70 14 80138254 80138272 AATGCCTAAACTGGCAGAG 59 80138305 80138324 AATGTTTAAACAGCCAGTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV5-37 ENSMUSG00000076571 ENSMUST00000103372 2 1 1 87 6 69913599 69913820 TTTCTGGATTTCAGCCTCC 59 69913530 69913548 AAGACTGACTGTTTCTCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV8-30 ENSMUSG00000076577 ENSMUST00000103378 2 1 1 62 6 70067578 70067597 CCAGGTTCTTATGTTACTGC 58 70067343 70067361 TGTGACATCACAATGTCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S99 ENSMUSG00000076698 ENSMUST00000103507 3 1 1 63 12 115984549 115984567 ACTGTAAACAAGTCCTCCA 58 115984504 115984522 CAGAATCCTCCGATGTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV8-6 ENSMUSG00000076715 ENSMUST00000103524 1 1 1 60 12 116404052 116404070 GGATACCTCCAACAACCAG 59 116404010 116404028 GGCAGTATCTACAGTGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ier5l ENSMUSG00000078200 ENSMUST00000104997 1 1 1 64 2 30327515 30327533 TACATTTCCCATCATGCCC 59 30327469 30327487 GTGAAGGAATCGACTTCCT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 A2A7J1_MOUSE ENSMUSG00000078570 ENSMUST00000106190 3 1 1 83 4 124527098 124527116 TCTTGATCATACCCTAGCC 57 124527033 124527051 TTAGTGAAGGGAGTTGGTC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Mup1 ENSMUSG00000078675 ENSMUST00000107483,ENSMUST00000095051 3 2 2 81 4 61179104 61179893 CCATACTGTAAGAGATGAAGAG 57 61179044 61179062 CGTCACAGAATATTCACCA 57 NA Nonspecific Mus musculus 50 0610010B08Rik ENSMUSG00000078890 ENSMUST00000109031,ENSMUST00000109030,ENSMUST00000109029 3 3 3 80 2 175650198 175650217 ATCCTTCTCAGAAGAGTCTC 57 175650257 175650483 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 NP_001091446.1 ENSMUSG00000079005 ENSMUST00000109888,ENSMUST00000109889 3 2 2 84 2 150928747 150928765 ATTTAGAGGCACTGTGCTC 59 150928813 150929057 CAACATGAACCAACCTGTG 59 NA Nonspecific, DesignNoJunction, InUTR Mus musculus 50 A2AP58_MOUSE ENSMUSG00000079118 ENSMUST00000110756 1 1 1 80 2 119892293 119892602 GTCACCAGAGGTTCAAGTC 59 119892231 119892251 ATTCATACAGCTCAACTGAGG 59 NA Mus musculus 50 Nhlh1 ENSMUSG00000079182 ENSMUST00000111262 2 1 1 113 1 173987694 173987714 GTATATGTGTCTGTGAGTGTG 58 173987601 173987619 GATTTGTAAGGCCTAGGCA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 NP_001092791.1 ENSMUSG00000079432 ENSMUST00000113183 2 1 1 60 X 131705328 131705346 CTTGTCTTCATTCTGCCTC 58 131704709 131705306 ATCAGCAGATAGTACTCTCAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Nanog-ps1 ENSMUSG00000079513 ENSMUST00000113958 3 1 1 60 X 86998042 86998060 ATGGCTCACTGATTATGGA 58 86998084 86998102 CCTCGTTGTTTGTGATAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem191c ENSMUSG00000079717 ENSMUST00000023451 1 1 1 69 16 17277194 17277212 AGAGTATCAGCCTTCAAGG 58 17277245 17277263 CAAGAACCTGAAGTCCTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Q05BM4_MOUSE ENSMUSG00000079884 ENSMUST00000116000 1 1 1 60 10 121516839 121516857 AGATCGAGAGTCTAGAGGG 58 121516797 121516815 GAACTTGTCAGTCCCATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Apoh ENSMUSG00000000049 ENSMUST00000000049 1 1 1 60 11 108266182 108266201 AGATATTCCTGCTTGTGCTC 59 108268626 108268645 GAGTGCAAACTTTGGAACTG 59 NA DesignNoJunction Mus musculus 50 Tcfe3 ENSMUSG00000000134 ENSMUST00000115680 2 1 7 133 X 7341121 7342647 TGGACCTGAATTCTTTGCT 59 7342744 7343696 CAGTGATATTGGGAGGCTG 59 NA Mus musculus 50 Ckmt1 ENSMUSG00000000308 ENSMUST00000078222,ENSMUST00000000317 3 2 2 82 2 121188475 121188493 TGACCTGTCCATCTAACCT 59 121188539 121188722 GAAGCGGTTATCTTTGCTC 58 NA Mus musculus 50 Uhrf1 ENSMUSG00000001228 ENSMUST00000113038,ENSMUST00000001258,ENSMUST00000113035,ENSMUST00000113039 1 4 4 80 17 56451627 56451646 TGTTGAGATCTGTAGGAAGC 59 56451688 56452301 AGCTGAGAGTCATTCAAGAG 59 NA Mus musculus 50 Col18a1 ENSMUSG00000001435 ENSMUST00000081654,ENSMUST00000072755,ENSMUST00000105409 2 3 3 105 10 76548013 76548031 CGCGGTAGATTCTATAGGA 57 76543601 76543904 CATACCTCCCTTTATCAAGC 57 NA Mus musculus 50 Ltbp1 ENSMUSG00000001870 ENSMUST00000112518,ENSMUST00000001927 3 2 5 88 17 75465531 75550612 GATACATCCTCAAGTTGCAC 58 75550663 75550681 AGTACTTGGGTTTGAGCAG 59 NA Mus musculus 50 Ap4e1 ENSMUSG00000001998 ENSMUST00000002063,ENSMUST00000110394,ENSMUST00000110393,ENSMUST00000110392 3 4 4 81 2 126840022 126845032 AAGAGTGGGTTATTTGGCT 58 126845074 126845095 CTTTACCACTGTATTCACAAGG 58 NA Mus musculus 50 Ap4e1 ENSMUSG00000001998 ENSMUST00000002063 3 1 4 81 2 126869429 126869448 TCTTCAACACCAGATAACCA 58 126869490 126871901 GTAAAGAAGTTCCAGAGTCTC 57 NA Mus musculus 50 Stat6 ENSMUSG00000002147 ENSMUST00000092074,ENSMUST00000099159 1 2 2 80 10 127096709 127096729 GATGTGACTATGGTAGAGGAC 59 127096771 127096866 CATGTCTTCACTGACCCAG 59 NA Mus musculus 50 Tead3 ENSMUSG00000002249 ENSMUST00000114799,ENSMUST00000080572 3 2 3 107 17 28472432 28473464 GGCATTAAGGCTATGAACC 58 28471895 28471913 CTTGTTCTGTAGAACGCTG 58 NA Mus musculus 50 Map2k7 ENSMUSG00000002948 ENSMUST00000062686,ENSMUST00000110999,ENSMUST00000110998,ENSMUST00000052385,ENSMUST00000003027,ENSMUST00000110995,ENSMUST00000110994,ENSMUST00000110996 3 8 8 80 8 4243846 4243958 TTGCTGTTAAGCAAATGCG 59 4244000 4244020 TCTTGAGTACTACATCCAGGT 59 NA Mus musculus 50 Cdkn1b ENSMUSG00000003031 ENSMUST00000003115,ENSMUST00000067327 1 2 2 60 6 134871045 134871065 CAATCATGAAGAACTAACCCG 59 134871087 134871105 ACTCGCTTCTTCCATATCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rps11 ENSMUSG00000003429 ENSMUST00000003521,ENSMUST00000051978 2 2 2 104 7 52378597 52378796 CTAAAGAGGCTATTGAGGGT 58 52378308 52378326 TCTTCATCTTCGTCACGAC 59 NA Mus musculus 50 Dll3 ENSMUSG00000003436 ENSMUST00000050191,ENSMUST00000108315,ENSMUST00000094650 3 3 3 155 7 29081519 29083545 GCTGTAGTGAAACCTCTGG 59 29081382 29081400 GACAGACATAGGCAGAGTC 59 NA Mus musculus 50 Ctns ENSMUSG00000005949 ENSMUST00000006103,ENSMUST00000108476 3 2 2 81 11 72999833 72999851 GTTCCTCTTCTGCTTCTCC 59 72998837 72999793 GTAGTAGAAGTTCATATAGGCCTG 59 NA Mus musculus 50 Tuft1 ENSMUSG00000005968 ENSMUST00000006123,ENSMUST00000107279 3 2 3 63 3 94438416 94438434 AAGTAGCAAGCTTGACAGG 59 94436576 94438390 TAGTACCACCTGTATCTCCT 58 NA DesignRelaxed Mus musculus 50 Rundc3a ENSMUSG00000006575 ENSMUST00000107102,ENSMUST00000107105,ENSMUST00000006750 1 3 4 80 11 102258929 102258947 TTGATGACTCTTCCGAGGA 59 102258991 102259407 GGGCACAAGCTTTAAATCG 59 NA Mus musculus 50 A2bp1 ENSMUSG00000008658 ENSMUST00000092375 2 1 4 155 16 7277171 7277189 AAACACAGAAAGCAAGTCC 58 7285616 7294173 GCATTATTAACCTTGGAGCC 58 NA Mus musculus 50 Nf2 ENSMUSG00000009073 ENSMUST00000109910,ENSMUST00000056290,ENSMUST00000053079,ENSMUST00000093374,ENSMUST00000109908 3 5 6 93 11 4699928 4699948 TATCTATGACCCTGAGAACAG 58 4694912 4699874 AATAGTAAACTCCTTGTCGC 57 NA Mus musculus 50 Npdc1 ENSMUSG00000015094 ENSMUST00000114282 2 1 3 105 2 25263443 25263462 CCATACTTCCTTGAGTTCCC 59 25263530 25263617 CAATATGGAGGAGCCAAGG 59 NA Mus musculus 50 Phf21b ENSMUSG00000016624 ENSMUST00000089001,ENSMUST00000016768 3 2 2 195 15 84633998 84635191 AGGTTATCATCATTCAGCCA 58 84627820 84629082 CTCTGGATCTCTTCTAGGTG 58 NA Mus musculus 50 Sgk2 ENSMUSG00000017868 ENSMUST00000109433 2 1 2 163 2 162823572 162823590 CTTCTTCCATCTACAGCGG 59 162824000 162829023 CTTCTGGAGCCAAGTACTG 59 NA Mus musculus 50 1700081L11Rik ENSMUSG00000018412 ENSMUST00000106977,ENSMUST00000018556,ENSMUST00000106972,ENSMUST00000106971,ENSMUST00000106974,ENSMUST00000069188 1 6 7 84 11 104197585 104197603 ATGTGAGGAGATGGAAAGG 58 104196998 104197537 TGATGACCTGTAAGACCTG 58 NA Mus musculus 50 Akap1 ENSMUSG00000018428 ENSMUST00000018572,ENSMUST00000107904,ENSMUST00000107903 2 3 4 90 11 88700361 88700946 CATAGAAGGCTCTCAGCAC 59 88700289 88700307 TGGCGCATAGATATTGGTG 59 NA Mus musculus 50 Pex12 ENSMUSG00000018733 ENSMUST00000018877,ENSMUST00000108146 1 2 2 82 11 83111868 83111886 ATCTTTGAGGTGGTAGCAC 59 83111530 83111823 GATTCTGCAAGAACCTTGAC 59 NA Mus musculus 50 Sult4a1 ENSMUSG00000018865 ENSMUST00000082365,ENSMUST00000109463 2 2 2 105 15 83917120 83920402 CATGAATGACAAACTGGGC 59 83917033 83917054 GTGCATGTCTTCATACTTAAGG 59 NA Mus musculus 50 Plod1 ENSMUSG00000019055 ENSMUST00000105713 1 1 4 82 4 147290446 147291425 GGTGATAATAAGTTTCTGAGGG 58 147290385 147290403 CAAACTGCACCTTCATGAG 59 NA Mus musculus 50 Akt3 ENSMUSG00000019699 ENSMUST00000019843,ENSMUST00000111159,ENSMUST00000111160 3 3 3 81 1 178973985 178980178 CAAATAAACGCCTTGGTGG 59 178973922 178973940 TCTTGCCAGTTTACTCCAG 59 NA Mus musculus 50 Aig1 ENSMUSG00000019806 ENSMUST00000105534 2 1 2 122 10 13373487 13373505 AACATATTGGCTCAGGAGC 59 13367504 13373406 CTTCTATACTTCTCTGTGTATCCC 59 NA Mus musculus 50 Slc16a7 ENSMUSG00000020102 ENSMUST00000063318,ENSMUST00000105257 1 2 2 80 10 124670542 124670561 ATGATCTTGGCTTCTTACAG 57 124668444 124670501 GAATGCTAATCCTAAACCTCC 58 NA Mus musculus 50 X83328 ENSMUSG00000020610 ENSMUST00000020929 2 1 3 190 11 109295896 109295914 TTTAACCCATGAGATCGGA 57 109296067 109313091 GCCTTTCTTCATTCATTCTG 57 NA Mus musculus 50 Prkar1a ENSMUSG00000020612 ENSMUST00000106677,ENSMUST00000020932,ENSMUST00000049527 1 3 4 82 11 109523625 109524271 GGAGAAATGGATGTCTATGTC 57 109524315 109524333 TAAATCAAAGCCAGCTCTC 57 NA Mus musculus 50 Fkbp1b ENSMUSG00000020635 ENSMUST00000020964,ENSMUST00000111148 3 2 2 117 12 4844990 4845011 CCTAAGAAGGGTCAGATATGTG 59 4841577 4841596 CTTCCTGTTTGCCAATTCTG 59 NA DesignNoJunction Mus musculus 50 Cct6b ENSMUSG00000020698 ENSMUST00000021040,ENSMUST00000100722 1 2 2 82 11 82567233 82568475 ATACTAACAGAGGCTGTGG 58 82567169 82567188 ACAATTTCCACCATGAAGAG 58 NA Mus musculus 50 Aanat ENSMUSG00000020804 ENSMUST00000021159 1 1 2 108 11 116457082 116457100 CAGTGCGTTTGAGATTGAG 59 116457427 116457445 TAAAGGCTGTAGCAGAAGG 58 NA DesignNoJunction Mus musculus 50 Wscd1 ENSMUSG00000020811 ENSMUST00000021168,ENSMUST00000092945,ENSMUST00000108511,ENSMUST00000108510 3 4 5 90 11 71573761 71580303 TAATAGAGGCAATTACCTGGG 58 71580354 71580373 GGTCATCTTTCTCAAGTCGT 59 NA Mus musculus 50 Spag9 ENSMUSG00000020859 ENSMUST00000103169,ENSMUST00000041956,ENSMUST00000092778,ENSMUST00000024979,ENSMUST00000103168 1 5 8 86 11 93932993 93942665 TTTACTAGGAATGGGTCGTG 59 93944076 93944094 TTCACTACATTCAGAGCGT 58 NA Mus musculus 50 Cacna1g ENSMUSG00000020866 ENSMUST00000107793,ENSMUST00000107792,ENSMUST00000107791,ENSMUST00000107790,ENSMUST00000107789,ENSMUST00000107788,ENSMUST00000103166,ENSMUST00000100561,ENSMUST00000050636,ENSMUST00000080043,ENSMUST00000021234,ENSMUST00000107785,ENSMUST00000073986 3 13 14 80 11 94321187 94323220 TTCTTCTCATCATCGTGGG 59 94321125 94321143 GCTTGGTCTCAGAGAACTG 59 NA Mus musculus 50 Alox8 ENSMUSG00000020891 ENSMUST00000021262 2 1 2 82 11 69000126 69000260 GATAGACAAGTCCACAGGC 59 69000062 69000080 GGACAGAGTAGTTCAGCTG 59 NA Mus musculus 50 Spata7 ENSMUSG00000021007 ENSMUST00000048402,ENSMUST00000101146 1 2 3 80 12 99897762 99897780 TTAACTCTGAGCTTGGGAC 58 99897823 99900197 TCGTGTAATTAGGTACCTGG 58 NA Mus musculus 50 Esr2 ENSMUSG00000021055 ENSMUST00000110421,ENSMUST00000101291,ENSMUST00000076634,ENSMUST00000110419 3 4 6 85 12 77224306 77234807 CCTCAACTCCAGTATGTACC 59 77224240 77224258 TCACTGCGTTCAATAGGTG 59 NA Mus musculus 50 Trim9 ENSMUSG00000021071 ENSMUST00000081485 3 1 3 97 12 71352013 71352031 TGATGTTAGGGAAGGACGA 59 71349405 71351952 TCCTTCAGTTCTGTTGGTG 59 NA Mus musculus 50 Trim9 ENSMUSG00000021071 ENSMUST00000110522,ENSMUST00000110520 3 2 3 102 12 71349404 71352006 TTGGGCAATAACTGAAGGAG 59 71349321 71349339 TTGCTGTTCATTGTTGACG 59 NA Mus musculus 50 Spin1 ENSMUSG00000021395 ENSMUST00000099517 1 1 4 105 13 51239866 51245992 ACTACAAAGAAGGAAGCTCAC 59 51246059 51246077 GATAGGTTCAACCTCCGTG 59 NA Mus musculus 50 Serpinb9c ENSMUSG00000021404 ENSMUST00000021837,ENSMUST00000110284 3 2 2 81 13 33248856 33249586 GATATCTGAGGCAATTGGCT 59 33248794 33248814 TGGCTTCTTCAGGATATTGAG 59 NA Mus musculus 50 Zcchc9 ENSMUSG00000021621 ENSMUST00000070886 3 1 2 101 13 91936855 91940230 GAGTCTATGCTGATGATCGG 59 91936773 91936791 TAGGTTTCTGCAGTTTGGG 59 NA Mus musculus 50 Cryl1 ENSMUSG00000021947 ENSMUST00000089502 1 1 2 104 14 57981835 57981853 CTCTCAAAGGCTCCTTGAG 59 57961026 57981767 ACCGTATCTGCTGAATGTG 59 NA Mus musculus 50 Sub1 ENSMUSG00000022205 ENSMUST00000022816,ENSMUST00000110504 1 2 2 184 15 11916314 11920726 CAACATGTTCCAGATTGGA 57 11913990 11914011 CGTCATCTATATCAGAGATCTG 57 NA Mus musculus 50 Trp63 ENSMUSG00000022510 ENSMUST00000065523 3 1 6 126 16 25884931 25884949 AGACATGAATGGACTCAGC 59 25885039 25889109 TCAGACTTGCCAAATCCTG 59 NA Mus musculus 50 P2rxl1 ENSMUSG00000022758 ENSMUST00000023441 3 1 2 81 16 17568031 17568129 AGTTCAACTTCTCCAGATCC 59 17568172 17568191 CTGGAGAGTGGATCATAGAG 58 NA Mus musculus 50 Ncam2 ENSMUSG00000022762 ENSMUST00000067602 1 1 3 81 16 81616144 81621595 AGCTTACCTGAAAGATGGA 57 81621640 81621658 CCCATCTTCATGGTTAGTG 57 NA Mus musculus 50 Il15ra ENSMUSG00000023206 ENSMUST00000091456,ENSMUST00000065131,ENSMUST00000078834 2 3 7 119 2 11645129 11645147 ACTTCTGCAGGAACTACAG 58 11645228 11645733 GGGAGAAATCTCTGTTATCCT 58 NA Mus musculus 50 Sfi1 ENSMUSG00000023764 ENSMUST00000093406 3 1 7 104 11 3087248 3087266 CCGATTACAAGAACTTCGA 57 3077516 3086079 AAGTAGTATCTGGCTCTAGAG 57 NA Mus musculus 50 Fbxl17 ENSMUSG00000023965 ENSMUST00000024761,ENSMUST00000112840 3 2 3 90 17 63840175 63840193 CGTTGGTTTGCAAGTACTG 59 63837308 63840121 TCATCAGTAACCTGCTGAC 58 NA Mus musculus 50 Kif6 ENSMUSG00000023999 ENSMUST00000095247,ENSMUST00000024798 3 2 2 82 17 49814643 49814661 AATCTACAACGAATGTGGC 58 49814707 49825729 ATATTGTCACTTTCGGCAG 57 NA Mus musculus 50 Cuta ENSMUSG00000024194 ENSMUST00000114935,ENSMUST00000025027 1 2 3 105 17 27075553 27075683 GATCACATCCATCTATGAATGG 58 27075365 27075383 AACAAACTCTGTCAGAGCA 59 NA Mus musculus 50 Anks1 ENSMUSG00000024219 ENSMUST00000097358,ENSMUST00000114842,ENSMUST00000025058 3 3 4 130 17 28113608 28113627 GATAGTACGTCTGCTCATCC 59 28115429 28122023 CATTGTCGTTGTTCTTGGC 59 NA Mus musculus 50 Fech ENSMUSG00000024588 ENSMUST00000091055,ENSMUST00000025484 1 2 2 83 18 64634762 64634781 CATCAAGATGTGGACTTCCA 59 64630458 64634716 TATTTGTGAGGTGCTGTGG 59 NA Mus musculus 50 Smarca2 ENSMUSG00000024921 ENSMUST00000025862,ENSMUST00000099537 3 2 3 80 19 26751222 26751241 ACTCATCACGTATCTGATGG 58 26751283 26752820 CAGTTAGACAGAGTCGAGAG 58 NA Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000041717,ENSMUST00000111662,ENSMUST00000086848,ENSMUST00000061496,ENSMUST00000078917,ENSMUST00000111659,ENSMUST00000111651,ENSMUST00000111649,ENSMUST00000111653,ENSMUST00000111656 1 10 15 122 19 55817577 55817595 GATGGAGGGCTCTTTAAGG 59 55817680 55892265 CATCTGAAGATAGGTTCGGG 59 NA Mus musculus 50 Dntt ENSMUSG00000025014 ENSMUST00000112200 3 1 2 81 19 41130318 41133559 GTATGACAGGACTAAGAGGG 58 41133603 41133621 TTCAATGTAGTCCAGTCCC 58 NA Mus musculus 50 D19Ertd652e ENSMUSG00000025067 ENSMUST00000026048,ENSMUST00000099350 3 2 2 83 19 47897574 47897593 GATCTCATTTATGGACCCGT 59 47890454 47897528 ATCTTTCGGCCTGAAAGTC 59 NA Mus musculus 50 Il23a ENSMUSG00000025383 ENSMUST00000026449 1 1 1 85 10 127734147 127734165 CCTCCCTACTAGGACTCAG 59 127733978 127733996 CTGACTAGAACTCAGGCTG 59 NA DesignNoJunction Mus musculus 50 R3hdm2 ENSMUSG00000025404 ENSMUST00000077046,ENSMUST00000105251 2 2 5 121 10 126918842 126921041 TACAACATGGCAGAAGACC 59 126921126 126921144 GGATGCTGGGAGATAAGTG 59 NA Mus musculus 50 Arhgef9 ENSMUSG00000025656 ENSMUST00000113884 1 1 10 80 X 92248120 92250292 TAAACAGAAAGGTAGGGTTGG 59 92248060 92248081 TAATATCCCTGAAGAACCTCAC 59 NA Mus musculus 50 Plcd4 ENSMUSG00000026173 ENSMUST00000067916,ENSMUST00000113749,ENSMUST00000113750,ENSMUST00000113747,ENSMUST00000113745,ENSMUST00000113748,ENSMUST00000027362 1 7 7 87 1 74602585 74602603 TTTATCATGGGCATACCCT 57 74602654 74604304 TAGTCTGATGACTGGAAGG 57 NA Mus musculus 50 Sp100 ENSMUSG00000026222 ENSMUST00000066427,ENSMUST00000027424 2 2 4 122 1 87575654 87575672 CCTCCAACACTGAGAAGAG 59 87588622 87590850 ACTTCTTGCTAGGAAAGCTG 59 NA Mus musculus 50 Dusp12 ENSMUSG00000026659 ENSMUST00000027970,ENSMUST00000046476 2 2 2 100 1 172810328 172810346 TTACCTCAGGAACTCTTCG 58 172809963 172810264 CTAAATAAAGACCGCCTGC 58 NA InUTR Mus musculus 50 Stam ENSMUSG00000026718 ENSMUST00000114738 2 1 3 109 2 13996163 14024034 TAATGGGCCTTGAGAAAGC 59 14024106 14037456 ACAATCTTTAGGTCCTGTGC 59 NA Mus musculus 50 Rabgap1l ENSMUSG00000026721 ENSMUST00000111640 2 1 5 104 1 162665784 162665804 TATGAAGGTTTCTTCCCACG 59 162665697 162665715 ACATTGGGCACATACAGAG 59 NA Mus musculus 50 Eng ENSMUSG00000026814 ENSMUST00000009705,ENSMUST00000113272 1 2 2 80 2 32533141 32533159 CCATCTTGTCCTGAGTAGC 59 32533202 32533453 CTGATGATCACCTCATTGCT 59 NA Mus musculus 50 Gfi1b ENSMUSG00000026815 ENSMUST00000028156 3 1 1 101 2 28470797 28470815 CCTCCTGCTGTAATTCCTG 59 28470330 28470348 TTTGATTGTGTTCCAGTCC 57 NA DesignNoJunction Mus musculus 50 Upp2 ENSMUSG00000026839 ENSMUST00000071543 2 1 3 61 2 58632552 58644201 CCTGAGAGTAGTTCCTATGTC 58 58644224 58644242 CTCAGAGTAGTTTGCAGGT 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Tyro3 ENSMUSG00000027298 ENSMUST00000028762 1 1 5 88 2 119628018 119628037 AAAGTCAGTGGAACGTCTG 59 119628089 119628107 GTGAGCCATACTGACTGAG 59 NA Mus musculus 50 Tmco5 ENSMUSG00000027355 ENSMUST00000082344 1 1 2 121 2 116708971 116708992 GGTAATCAGGTATGAACAAGGT 59 116712037 116712986 CTTCCTGGTACTTCTTGCC 59 NA Mus musculus 50 Stx16 ENSMUSG00000027522 ENSMUST00000044638,ENSMUST00000087908,ENSMUST00000094281 3 3 3 94 2 173917043 173917061 AAGCATTTGAACAGACCCA 59 173917119 173917916 CACCTATGGAAGAGCTGTG 59 NA Mus musculus 50 Lime1 ENSMUSG00000027582 ENSMUST00000116366,ENSMUST00000108806,ENSMUST00000108805,ENSMUST00000048077 2 4 8 141 2 181117740 181117758 CAGCTGACCATTAGTTGTG 58 181117863 181117978 AGTATAGGACGTCCATCTG 57 NA Mus musculus 50 Ampd2 ENSMUSG00000027889 ENSMUST00000102638,ENSMUST00000102637,ENSMUST00000106668,ENSMUST00000078912 1 4 5 81 3 107883081 107883192 GACTTACAGCTGTACAAGGA 59 107883019 107883037 ATTCCCGTTCCAATACCAC 59 NA Mus musculus 50 Nfkb1 ENSMUSG00000028163 ENSMUST00000029812 2 1 3 82 3 135248470 135252299 AGCACATAGATGAACTCCG 59 135248406 135248425 CTCTGTAAAGCTGAGTTTGC 59 NA Mus musculus 50 Lrrc44 ENSMUSG00000028182 ENSMUST00000029833 1 1 2 90 3 154826996 154850638 TCATAAAGGTCAGAAGGCT 57 154850690 154850710 ATATAGAGGGATCTTCATGGC 58 NA Mus musculus 50 4921539E11Rik ENSMUSG00000028520 ENSMUST00000097944 3 1 2 117 4 102908321 102908339 TCAAACAGAGCATCATGCT 59 102908080 102908241 TTGTTAATTACGGCCATGGA 59 NA Mus musculus 50 Slc5a9 ENSMUSG00000028544 ENSMUST00000102721,ENSMUST00000102720,ENSMUST00000030272,ENSMUST00000102719 3 4 4 88 4 111563300 111563550 CATGTTTCTGGGCTTTCAG 59 111563230 111563250 TATTGGGAACTGTGGTATTGG 59 NA Mus musculus 50 Dock7 ENSMUSG00000028556 ENSMUST00000075836 1 1 5 88 4 98667784 98667802 CCTTAGCAACAGTAACCCA 59 98659140 98667732 GATCCATAGCCTTACTGCC 59 NA Mus musculus 50 Btf3l4 ENSMUSG00000028568 ENSMUST00000102742,ENSMUST00000102741,ENSMUST00000102740,ENSMUST00000102739 3 4 4 80 4 108491791 108491810 ATATTAAGTCAGCTTGGTGC 57 108490839 108491748 ACTATCCAATACTTGCCGT 58 NA Nonspecific Mus musculus 50 Echdc2 ENSMUSG00000028601 ENSMUST00000052999,ENSMUST00000116309,ENSMUST00000106695,ENSMUST00000106694,ENSMUST00000106693,ENSMUST00000116308,ENSMUST00000106692,ENSMUST00000030338,ENSMUST00000116307 3 9 10 144 4 107842373 107842469 GTGTTTGTTAGTGAGCTGC 59 107844717 107844735 CCTCCACATCACTCATCTG 59 NA Mus musculus 50 2810410C14Rik ENSMUSG00000028621 ENSMUST00000094921,ENSMUST00000030364 2 2 5 104 4 106746556 106753504 TTTAATCAAGTACGGCGAG 57 106753572 106753590 AAGGTCTCATCATCTTCGT 57 NA Mus musculus 50 4931406I20Rik ENSMUSG00000028677 ENSMUST00000030439,ENSMUST00000102690,ENSMUST00000116298,ENSMUST00000097914,ENSMUST00000094853 2 5 5 96 4 116945917 116945936 TACATTTGAGGCTCTGAAGG 59 116945721 116945858 CGAGTAAGAGTCCATGCAG 59 NA Mus musculus 50 Nasp ENSMUSG00000028693 ENSMUST00000030456,ENSMUST00000030457 2 2 4 81 4 116286981 116286999 GAAACGGCTAATGAGTGTG 58 116284670 116286937 ACACTCCATTCTCCATTCTG 59 NA Mus musculus 50 Ube4b ENSMUSG00000028960 ENSMUST00000103212 1 1 2 80 4 148725684 148727044 AGCTTAAGAAACTGGTACG 57 148725622 148725641 AATTCAGGCATCTTCTTAGG 57 NA Mus musculus 50 Dnajc2 ENSMUSG00000029014 ENSMUST00000115193,ENSMUST00000115195,ENSMUST00000030771 2 3 4 81 5 21267408 21267426 TGGTCAGAAGATGATCTGC 59 21266531 21267364 CAATGACTTCCCATCTTGAG 58 NA Mus musculus 50 Pank4 ENSMUSG00000029056 ENSMUST00000070953 3 1 3 143 4 154353640 154353658 GTGACCTACAGTGAGTCTC 58 154353898 154354215 AGATGTACACAAGCTGAGG 58 NA Mus musculus 50 Pan3 ENSMUSG00000029647 ENSMUST00000085571,ENSMUST00000031651 2 2 3 82 5 148266695 148266713 TCTTCTGACTTCATCTGCT 57 148266759 148299699 TAGGATTTGGTGTCTTCCT 57 NA Mus musculus 50 Ezh2 ENSMUSG00000029687 ENSMUST00000081721,ENSMUST00000114623 3 2 3 90 6 47526597 47526616 CTTAAACCAAGAGTGGAAGC 58 47508285 47526544 GACTGAACACTCCCTAGTC 58 NA Mus musculus 50 Gcc1 ENSMUSG00000029708 ENSMUST00000090511,ENSMUST00000064377 2 2 2 60 6 28369040 28369060 TCCAGTCTGGATATCAATGTC 58 28369000 28369019 CCTGTAGTAGCTTCTTGAGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tpk1 ENSMUSG00000029735 ENSMUST00000114643 3 1 3 84 6 43561330 43561348 CTTTGGATGCACGATTTCG 59 43543094 43543113 TCTATCAGTCTCCTCTCAGC 59 NA DesignNoJunction Mus musculus 50 Zc3hav1 ENSMUSG00000029826 ENSMUST00000114900,ENSMUST00000039710,ENSMUST00000031850 3 3 4 93 6 38281851 38282150 CTGCTGAGTATTCCCTATGC 59 38281777 38281797 CTGTACAGATGATCCAGACAG 59 NA Mus musculus 50 Kras ENSMUSG00000030265 ENSMUST00000032399,ENSMUST00000111710,ENSMUST00000111709,ENSMUST00000032397 3 4 4 92 6 145182936 145195224 TACGATAGAGGACTCCTACAG 59 145182864 145182882 CTGTACTCCTCTTGACCTG 58 NA Mus musculus 50 Ttc23 ENSMUSG00000030555 ENSMUST00000107471,ENSMUST00000072071,ENSMUST00000107470 1 3 4 139 7 74823940 74843110 ATCAGTCATTTCTCACGGG 59 74843213 74854225 TATTTCTCGGCCACATCAC 59 NA Mus musculus 50 Il21r ENSMUSG00000030745 ENSMUST00000033000,ENSMUST00000084605 2 2 2 88 7 132768804 132768823 CTACACTGACTACCTCTGGA 59 132768874 132770407 ATTCATCTTGCCAGGTGAG 59 NA Mus musculus 50 Parva ENSMUSG00000030770 ENSMUST00000106643,ENSMUST00000033030,ENSMUST00000106640 1 3 3 80 7 119724467 119724485 CTGAATGTCTCCTTTGCCT 59 119724529 119732064 GTTGACAATGTCTTCTGGC 59 NA Mus musculus 50 Cul4b ENSMUSG00000031095 ENSMUST00000050083,ENSMUST00000115118 3 2 3 80 X 35897979 35897997 CCAAACGCCTATTAGTTGG 58 35896586 35897935 CTCCACATTCGTGTTTCAG 58 NA Mus musculus 50 2610529C04Rik ENSMUSG00000031232 ENSMUST00000113566 1 1 2 80 X 103174794 103174813 GGGTTACCTTAGGAATGGTG 59 103169603 103174752 CAATACACATCATCCTTCGC 59 NA Mus musculus 50 Sytl4 ENSMUSG00000031255 ENSMUST00000033608 3 1 3 99 X 130475063 130475791 TTTGTCAAGGGATACCTCC 58 130474982 130475002 CAAATGTATGGTTGTAGTGGG 58 NA Mus musculus 50 Gabrq ENSMUSG00000031344 ENSMUST00000114553,ENSMUST00000033711 3 2 2 88 X 70082323 70082341 ACAGAAGATGCAGGAAACC 59 70082393 70083073 ATTAATCAGGCCATCCTGC 59 NA Mus musculus 50 Amelx ENSMUSG00000031354 ENSMUST00000066112,ENSMUST00000112118 3 2 5 80 X 165620457 165621845 ACTTAAGCTATGAGGTGCT 57 165620126 165620144 GTTCGTAACCATAGGAAGG 57 NA Mus musculus 50 Renbp ENSMUSG00000031387 ENSMUST00000116578,ENSMUST00000033762,ENSMUST00000114377 1 3 4 84 X 71175580 71175598 CTTCTTCACATGTCTTGGC 58 71175408 71175532 ATACATCCATACCTGCCTC 58 NA Mus musculus 50 Sorbs2 ENSMUSG00000031626 ENSMUST00000037085,ENSMUST00000098788 1 2 4 86 8 46891183 46891202 AATTTACACCCTAAGCTCCA 58 46905116 46909124 TCATCTTCGTTCGGTTCTC 59 NA Mus musculus 50 Abcg4 ENSMUSG00000032131 ENSMUST00000034648 2 1 2 81 9 44082928 44083107 CTATGTTAGGTATGGCTTTGAG 58 44082868 44082886 CTGTTCATCTAAGCAGGTC 57 NA Mus musculus 50 Tpm1 ENSMUSG00000032366 ENSMUST00000113705,ENSMUST00000113695,ENSMUST00000034928,ENSMUST00000113690,ENSMUST00000113707,ENSMUST00000113693,ENSMUST00000113686,ENSMUST00000113685,ENSMUST00000113687,ENSMUST00000030185 1 10 16 118 9 66879309 66879765 CTGAGAAGTACTCTCAGAAGG 58 66878858 66878879 CTCCAATTTGGTTACTGATCTC 58 NA Mus musculus 50 Tfdp2 ENSMUSG00000032411 ENSMUST00000112962 2 1 2 84 9 96195473 96195492 CGTCATACAATGAGGTAGCT 59 96195539 96198053 TCATAAGCCTGCGAATCAG 59 NA Mus musculus 50 Eml4 ENSMUSG00000032624 ENSMUST00000049503,ENSMUST00000112363 3 2 4 86 17 83827351 83839376 TCATCGTCAATCAAGAAGGAG 59 83839424 83839442 AGTTGTCAACATCCGAAGG 59 NA Mus musculus 50 Ptprf ENSMUSG00000033295 ENSMUST00000106394 2 1 2 137 4 117893175 117893193 CATCAAAGGATGAGCAGTC 58 117889786 117890628 CTCGCATACTTGAGATATTCG 58 NA Mus musculus 50 Zbtb1 ENSMUSG00000033454 ENSMUST00000042779 2 1 2 60 12 77486539 77486557 TCCAGCTGTACAATGTTCC 59 77486581 77486599 GAACTAGAACAGTCTGCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Exoc6b ENSMUSG00000033769 ENSMUST00000101224 1 1 4 112 6 84939501 84939519 TATCCTGCACTGAAGACAC 58 84939405 84939425 TTATTTCCTCCCGACTTGG 58 NA Mus musculus 50 Aspm ENSMUSG00000033952 ENSMUST00000097554 3 1 2 193 1 141373296 141373316 AGCTGCTAGAGTTATTCAGTC 59 141373471 141378924 TACATCCAGCCTGAATGAG 58 NA Mus musculus 50 Phka1 ENSMUSG00000034055 ENSMUST00000052012,ENSMUST00000043596 2 2 3 88 X 99727764 99727782 AACGAACTGGAATCATGCA 59 99723448 99727425 ACCACTAGTCTGACTCTCC 59 NA Mus musculus 50 Bzrap1 ENSMUSG00000034156 ENSMUST00000039627,ENSMUST00000100644,ENSMUST00000107939,ENSMUST00000107936 1 4 6 83 11 87595478 87595496 CATCCAACTTCCTGGAAGG 59 87595543 87596171 TCCTCGTTCTCTGACTCTC 59 NA Mus musculus 50 Wbp2 ENSMUSG00000034341 ENSMUST00000106446,ENSMUST00000074628,ENSMUST00000106444 2 3 3 82 11 115945200 115945218 ATGAAGAATGTGCCAGAGG 59 115943709 115945155 TTAGACAGAAAGATGACCCG 59 NA Mus musculus 50 Spata6 ENSMUSG00000034401 ENSMUST00000106579 2 1 4 86 4 111418855 111418873 TCTTCAATGCCAGAATGGT 59 111420399 111441329 TTTCTCCCAACTCAAGCTG 59 NA Mus musculus 50 Zfp707 ENSMUSG00000034429 ENSMUST00000109966,ENSMUST00000109967 3 2 2 99 15 75803626 75803977 TTGAATGAACTGGGATGCT 59 75804040 75804058 GAAACTCAGATCTGTCCCA 58 NA Mus musculus 50 Rsrc1 ENSMUSG00000034544 ENSMUST00000065074,ENSMUST00000046542,ENSMUST00000065047,ENSMUST00000065115 2 4 4 159 3 66984775 67010354 ATTAGAACATCTGCCTCCAG 59 67153838 67153856 GACTTGTTCTACCAGGGTG 59 NA Mus musculus 50 Atp5h ENSMUSG00000034566 ENSMUST00000073791,ENSMUST00000106537,ENSMUST00000043931 3 3 3 81 11 115277188 115277341 GTATGAGAAGCAGCTGGAG 59 115277125 115277145 TGGGAAGATCTCATTCAAGTC 59 NA Nonspecific Mus musculus 50 Map4k5 ENSMUSG00000034761 ENSMUST00000110570,ENSMUST00000110567 3 2 3 196 12 70919485 70923807 CACTGATGTCATTATCAGAAGG 58 70917379 70919025 AACTATGCAGCATTTGTGG 58 NA Mus musculus 50 Map2k2 ENSMUSG00000035027 ENSMUST00000099460 2 1 3 138 10 80581892 80582006 GATCATGCACAGAGATGTG 58 80586537 80586555 AACAAACAGCATCACTGTC 58 NA Mus musculus 50 Map2k2 ENSMUSG00000035027 ENSMUST00000048223 3 1 3 118 10 80582339 80582357 TGATGCCAAGGAACTAGAG 58 80582439 80583796 CATGACCTACACTGATGGG 59 NA Mus musculus 50 Eef2k ENSMUSG00000035064 ENSMUST00000047875,ENSMUST00000106489,ENSMUST00000106488 3 3 5 114 7 128042957 128042975 GTACGATGGGATACAGGAC 58 128043050 128046806 GTACAAATCTCCTGATCTTTGG 58 NA Mus musculus 50 Mbd3 ENSMUSG00000035478 ENSMUST00000092295 3 1 2 288 10 79861917 79861935 CTGGGAAAGGGAAGAAGTG 59 79857887 79857905 TTGCTTGAAGATGGATGCA 59 NA DesignNoJunction Mus musculus 50 Ddx26b ENSMUSG00000035967 ENSMUST00000039374,ENSMUST00000101553 2 2 2 82 X 53734617 53736959 TTCCTGTTGGAGAAGACAC 59 53737004 53737023 TTTATGACAACTATGCCACG 58 NA Mus musculus 50 Surf6 ENSMUSG00000036160 ENSMUST00000114043,ENSMUST00000047632 1 2 2 117 2 26755337 26755355 TCACAAGACTAAAGCCCTG 59 26754935 26755256 GCCTTGGCTATCTTTAGGG 59 NA Mus musculus 50 Lphn3 ENSMUSG00000037605 ENSMUST00000113424 3 1 4 83 5 82170158 82189659 CTTGACAATATCAAGTCATGGG 59 82189703 82189721 ATACATGAGTCCAAAGGCC 59 NA Mus musculus 50 Prosapip1 ENSMUSG00000037703 ENSMUST00000045761,ENSMUST00000110260,ENSMUST00000089561 3 3 3 60 2 130461196 130461522 AAACTAAGTGGGAGGTGTG 59 130461154 130461172 TTCAGTTGTTGCTTCAGGA 59 NA DesignRelaxed Mus musculus 50 Rapgefl1 ENSMUSG00000038020 ENSMUST00000107480,ENSMUST00000037640,ENSMUST00000107479 3 3 3 80 11 98703898 98703916 TGAGTCTCTTTACCAGGAC 57 98703960 98707197 TCTGGAATCTTTAGCTCCA 57 NA Mus musculus 50 Ccdc50 ENSMUSG00000038127 ENSMUST00000039443,ENSMUST00000100026 1 2 3 89 16 27435728 27435747 GAAATTGCCAGGAAATTGCA 59 27436489 27436592 AGCAATTTCCTCATCCTGG 59 NA Mus musculus 50 Mrpl48-ps ENSMUSG00000038330 ENSMUST00000107143 1 1 3 80 4 88274087 88275117 AAACATTTGCAGGTACCTG 58 88274025 88274043 TAATCCAAGTCCGTCTGTG 58 NA Mus musculus 50 Ensa ENSMUSG00000038619 ENSMUST00000058230,ENSMUST00000037983 3 2 2 107 3 95430720 95430739 AGCTAAAGGCCAAATATCCA 59 95432475 95432493 TGTTGTAGTCTCCTGAGTC 57 NA DesignNoJunction Mus musculus 50 Usp6nl ENSMUSG00000039046 ENSMUST00000114937,ENSMUST00000091473,ENSMUST00000042503 1 3 3 80 2 6348656 6348768 TTGATCGAACTCCCTTCAG 58 6348812 6348830 ACATAGCAGTAAGGACTCG 58 NA Mus musculus 50 Whrn ENSMUSG00000039137 ENSMUST00000009212 3 1 11 113 4 63087063 63090132 AGACCTGATGGAGATTTCTC 58 63086969 63086987 TACAGAGTGGCCTTTAAGG 58 NA Mus musculus 50 Rbms3 ENSMUSG00000039607 ENSMUST00000044901,ENSMUST00000111773,ENSMUST00000111772,ENSMUST00000068962,ENSMUST00000069095,ENSMUST00000084824 2 6 6 128 9 117019121 117019139 TATACATCCGAGGACTTCC 57 116868669 116965864 AACCATAACCTTTGCACTG 58 NA Mus musculus 50 Wdr34 ENSMUSG00000039715 ENSMUST00000113711,ENSMUST00000045622 2 2 2 81 2 29887642 29887660 CAAGTACCTGTTTGCTGTG 58 29887479 29887598 AAGTTGTACATCACCTTCCC 59 NA Mus musculus 50 4931408A02Rik ENSMUSG00000039903 ENSMUST00000099548,ENSMUST00000037539 1 2 3 84 16 90890852 90890870 AATTACCACTTCGGAAGCC 59 90890916 90894840 TGAGTATGTTCTTGGGAACAC 59 NA Mus musculus 50 Rbms2 ENSMUSG00000040043 ENSMUST00000099139,ENSMUST00000092033,ENSMUST00000105247,ENSMUST00000076233 3 4 4 194 10 127580603 127582741 ACAAATGGCAAAGCAACAG 59 127575230 127575249 TCACACTTCTCTGTTGACTC 59 NA Mus musculus 50 Parc ENSMUSG00000040327 ENSMUST00000066026 2 1 2 98 17 46647870 46647889 CAGAAGAGGAACCTCTTGAG 59 46646993 46647809 CTCCAGTACCAGACAAACC 59 NA Mus musculus 50 Usp45 ENSMUSG00000040455 ENSMUST00000040429,ENSMUST00000108232 2 2 3 95 4 21744077 21751576 GAAGAAAGGAACCAACTAAGTC 58 21751631 21751650 GTTGTCATTCTTTGGGTGTG 59 NA Mus musculus 50 Wdr7 ENSMUSG00000040560 ENSMUST00000072726 2 1 2 112 18 63951532 63953885 CTTAGTAAATGAAGGCTGGAG 58 63953959 63953977 ATCTTCGAGCTAGCATCTC 58 NA Mus musculus 50 Erg ENSMUSG00000040732 ENSMUST00000113845 3 1 4 93 16 95600777 95600795 CCTTCCACATCTGACTTCC 59 95591654 95600723 AGGCTCATAAGGTAAATCTGTG 59 NA Mus musculus 50 Ttc3 ENSMUSG00000040785 ENSMUST00000064541 1 1 4 144 16 94613646 94613667 GGAAATGAAGAGTTCTCAAAGG 59 94614771 94615952 GAGAATGTATTCTAAACTGCCC 58 NA Mus musculus 50 Mtap7d2 ENSMUSG00000041020 ENSMUST00000112471,ENSMUST00000058145,ENSMUST00000043151,ENSMUST00000112470,ENSMUST00000087141 1 5 5 115 X 155907919 155907938 CATACAAGTCCTCTCCAACC 59 155908016 155910765 TTTCTCCATCTGTGAAGGC 59 NA InUTR Mus musculus 50 Dmxl2 ENSMUSG00000041268 ENSMUST00000114362 1 1 2 147 9 54227641 54228729 AGAAAGCAGAGTGAGTCTG 58 54226741 54226760 CCATGATCATGTCAGATTCC 58 NA Mus musculus 50 Disc1 ENSMUSG00000043051 ENSMUST00000074562,ENSMUST00000098311 2 2 3 134 8 127672346 127672364 GTCAGAGAACTCACTGCTC 59 127679003 127688903 GAAGCAGCTTCCTGATAGG 59 NA Mus musculus 50 Usp48 ENSMUSG00000043411 ENSMUST00000105842 2 1 10 97 4 137189299 137189317 GATGATAGCAAACGAGCAG 58 137189378 137200273 TGGTACTTCCATTGCTCTC 58 NA Mus musculus 50 Pkhd1 ENSMUSG00000043760 ENSMUST00000060305 3 1 3 90 1 20364837 20367459 CTGGGTAATCCTACCTGGA 59 20364041 20364061 TTATTGTACTTCCCTGTTCCC 59 NA Mus musculus 50 Klk12 ENSMUSG00000044430 ENSMUST00000107970,ENSMUST00000014063 2 2 2 71 7 51026442 51026461 GTACTACAAACAAGCCATGG 58 51027380 51027398 CATTGGAGACAGTGGAGAG 59 NA DesignNoJunction Mus musculus 50 1190002N15Rik ENSMUSG00000045414 ENSMUST00000113028,ENSMUST00000061904 2 2 2 81 9 94424849 94424867 TAATCATTGTGGATGCCGA 59 94421041 94421059 CATACGTCCCAATTCTCAG 57 NA DesignNoJunction Mus musculus 50 St7l ENSMUSG00000045576 ENSMUST00000106769,ENSMUST00000059271 1 2 3 80 3 104677849 104685718 CTTCAGACACAGTTATGCAG 58 104685759 104685779 ACTCTAAAGCTTGATAGGCTG 59 NA Mus musculus 50 Lrtm1 ENSMUSG00000045776 ENSMUST00000055662 1 1 1 63 14 29835361 29835379 TACTGGGTCTGAAACTCTG 58 29840513 29840531 ATGGCACCATCTGTTTCTC 59 NA DesignNoJunction Mus musculus 50 0610025J13Rik ENSMUSG00000046683 ENSMUST00000062256 3 1 1 285 4 97988168 97988186 GAGACAGTCAAAGCTTCCA 59 97989236 97989254 GAAATGCTGTTGCTAGTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tctex1d4 ENSMUSG00000047671 ENSMUST00000062206 3 1 1 79 4 116799930 116799949 TACTTGTTCCAAACGTACAG 57 116800617 116800635 TGGTAGTCTCCTCTTCCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Zbtb33 ENSMUSG00000048047 ENSMUST00000049740,ENSMUST00000115142 3 2 2 60 X 35546159 35546177 GCAACTCTAAGCCAAACAC 59 35546200 35546219 GATGTGTTGAAGCTGAAGAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mfap1b ENSMUSG00000048222 ENSMUST00000056732 3 1 1 80 2 121292773 121292791 TGAAACAGAAGGAACTGGA 58 121292620 121292731 CTTCTTCTACAATCTTGAGGG 57 NA Nonspecific Mus musculus 50 4921525H12Rik ENSMUSG00000049565 ENSMUST00000062935,ENSMUST00000094007,ENSMUST00000106606 2 3 3 80 3 108555539 108555557 AATTTCCTGAACCTTCGCA 59 108559407 108559670 CAGGTTCAAGTCCTGTGAG 59 NA Mus musculus 50 Vgll2 ENSMUSG00000049641 ENSMUST00000058347 3 1 1 61 10 51745034 51745052 GTCCTCTTCACCTACTTCC 58 51745077 51745095 GCCCTACTGAAATGTTCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:1201789 ENSMUSG00000049751 ENSMUST00000110619 3 1 3 191 12 70284256 70284274 GAGTACTTGGTGGGTTCAC 59 70284083 70284103 TTCTTACAGAAAGTCCTTCGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Bre ENSMUSG00000052139 ENSMUST00000080598,ENSMUST00000063813,ENSMUST00000071531,ENSMUST00000114507,ENSMUST00000078891,ENSMUST00000114511 2 6 7 105 5 32359943 32359961 CACTTTACCAACAGTGGAC 58 32360029 32386964 TGAAATAAGCCTTTGCTCTC 58 NA Mus musculus 50 Trpm3 ENSMUSG00000052387 ENSMUST00000099569,ENSMUST00000087576,ENSMUST00000037901 1 3 7 80 19 22972267 22972285 GACCCTCTACCACAATCTC 58 22974650 22975552 CTCAAGGGAATATCATCCTCC 59 NA Nonspecific Mus musculus 50 Rexo4 ENSMUSG00000052406 ENSMUST00000064244,ENSMUST00000114020,ENSMUST00000114019 3 3 3 159 2 26818032 26818050 TACCTCCCACAGATACCTC 59 26816249 26817909 CAGATGTCTTCCTCAGTGG 59 NA Mus musculus 50 Ccdc79 ENSMUSG00000052616 ENSMUST00000064576 1 1 3 195 8 107008188 107008206 CTTACGTGCTTCACAACTG 59 106996928 107006080 TGTTGCTTCTCCTCTTTCC 59 NA Mus musculus 50 Kcnip1 ENSMUSG00000053519 ENSMUST00000101368,ENSMUST00000109340,ENSMUST00000065970,ENSMUST00000109341,ENSMUST00000093194 2 5 5 93 11 33534579 33534598 ATGTGGATGTCTTCTTCCAG 59 33530588 33533155 ATGTTGTCATCCTCCTGAC 58 NA Mus musculus 50 Eef1d ENSMUSG00000055762 ENSMUST00000109972,ENSMUST00000089681,ENSMUST00000089680,ENSMUST00000073802,ENSMUST00000023235,ENSMUST00000109976,ENSMUST00000116440,ENSMUST00000109975 1 8 9 130 15 75726770 75726788 AAGAAGATAAGGAGGCTGC 59 75726342 75726676 AGTCTCATCATCCCAAGGT 59 NA Mus musculus 50 Myh8 ENSMUSG00000055775 ENSMUST00000019625,ENSMUST00000108686 3 2 4 82 11 67106409 67106427 TATAACAAGAACCCAGGCG 59 67106472 67107869 AGATGGATTCTCTTCTCAGC 58 NA Mus musculus 50 Fmnl1 ENSMUSG00000055805 ENSMUST00000107027 1 1 3 101 11 103059084 103059458 TCATCACAGTGCTGAAGAC 59 103059523 103059541 GCTAAAGGGTCATCTCCTC 59 NA Mus musculus 50 Skap1 ENSMUSG00000057058 ENSMUST00000107662 1 1 7 85 11 96402730 96402748 CAATCTGAGTGGGACTCAC 59 96402797 96442511 GTGTCTGGGATCTTTCCTC 59 NA Nonspecific Mus musculus 50 Spna2 ENSMUSG00000057738 ENSMUST00000113719,ENSMUST00000113717,ENSMUST00000046257 2 3 6 104 2 29855575 29857763 GACAACCAATATCAGTCTCTG 58 29857829 29857847 CTGTAACTCGTTTGCTTCC 58 NA Mus musculus 50 Sez6l ENSMUSG00000058153 ENSMUST00000075387,ENSMUST00000100883 1 2 3 91 5 112854739 112855760 AACATGCATTGGAAGAAGC 59 112854666 112854684 CAAGGAGATGAGAAGGACC 59 NA Mus musculus 50 Hipk2 ENSMUSG00000061436 ENSMUST00000038777,ENSMUST00000101516,ENSMUST00000114856 2 3 4 87 6 38693130 38693148 GTCACTCCCATTGAAACTC 58 38687506 38693079 AACAAGATTTGACATGGGC 58 NA Mus musculus 50 Tnnt3 ENSMUSG00000061723 ENSMUST00000105949,ENSMUST00000105948,ENSMUST00000105944 1 3 20 194 7 149689962 149691430 AAGAGGAAGAGGAAGTCCA 59 149697249 149697267 TAAGTGCGATTAGCTCCTC 58 NA Mus musculus 50 OTTMUSG00000000651 ENSMUSG00000062551 ENSMUST00000110335,ENSMUST00000054932,ENSMUST00000099658,ENSMUST00000110331 2 4 5 115 13 27947095 27947114 ATTATTCTAAAGTGCCTGGG 57 27947191 27948324 CAGAAGAGCTTCATAGTGTG 57 NA Mus musculus 50 Luzp2 ENSMUSG00000063297 ENSMUST00000116312,ENSMUST00000082373 1 2 2 80 7 62504853 62519661 CTCAAGATGAGGGTAGTTCC 59 62519704 62519722 TTGTGAGCTCTGATTCTGC 59 NA Mus musculus 50 Tacc1 ENSMUSG00000065954 ENSMUST00000084030,ENSMUST00000084512 2 2 2 120 8 26276085 26277843 CAAATGATTGAGGACGAGC 58 26275983 26276001 GATCAGAAAGGGACCTCTC 58 NA Mus musculus 50 Zic3 ENSMUSG00000067860 ENSMUST00000088629 1 1 3 83 X 55286629 55286647 CGGACAAGCCCTATATCTG 59 55286694 55294364 CAGGACAACACTTCATGTG 58 NA Mus musculus 50 Cenpb ENSMUSG00000068267 ENSMUST00000103187,ENSMUST00000089510 1 2 2 60 2 131004227 131004248 GGTTGATGATAGTGATGAAGAG 58 131004188 131004206 GTCTTCAGCCTCTAAACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hist1h2bp ENSMUSG00000069308 ENSMUST00000102982 1 1 3 109 13 21879736 21879754 CTGTCACCAAGTACACCAG 59 21879824 21879845 CTTAACAAGCAATCCATCTCTG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Olfr1331 ENSMUSG00000073769 ENSMUST00000106360,ENSMUST00000094831 2 2 2 60 4 118541827 118541846 CAGGGTCTTGTATTTGTGGT 59 118541867 118541887 AGACTCATGGTGAAGAAAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mup1 ENSMUSG00000073832 ENSMUST00000071005,ENSMUST00000107484,ENSMUST00000095049,ENSMUST00000107488,ENSMUST00000107489 3 5 5 81 4 61255444 61256233 CCATACTGTAAGAGATGAAGAG 57 61255384 61255402 CGTCACAGAATATTCACCA 57 NA Nonspecific Mus musculus 50 ENSMUSG00000074363 ENSMUSG00000074363 ENSMUST00000098800 1 1 1 66 9 47621996 47622014 ATATAGTCCGAATGAGCCT 57 47609148 47609167 ACTATTGTGGTGTAATGTCC 57 NA DesignNoJunction, InUTR Mus musculus 50 S100a16 ENSMUSG00000074457 ENSMUST00000107335,ENSMUST00000098911,ENSMUST00000107334,ENSMUST00000107333,ENSMUST00000107331,ENSMUST00000098910 2 6 6 103 3 90346032 90346050 AACAAGATCAGCAAGTCCA 59 90346309 90346327 TTCTGGATGAGCTTGTCAG 59 NA DesignNoJunction Mus musculus 50 Mgst2 ENSMUSG00000074604 ENSMUST00000099106 2 1 1 75 3 51481518 51481536 ATCGTAATGCTGTGGATGG 59 51485735 51485754 CGTATATGTACAGGAGACCC 58 NA DesignNoJunction Mus musculus 50 Lcmt2 ENSMUSG00000074890 ENSMUST00000099486,ENSMUST00000110674 1 2 2 60 2 120964592 120964611 TCAATAGATATCCAGCCCTC 58 120964551 120964569 CATTAAACACATGAGCCGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRBV12-2 ENSMUSG00000076468 ENSMUST00000103269 3 1 1 75 6 41069244 41069262 GATAAAGGAAACCTGCCCA 59 41069301 41069319 AGGCACTCATGTTCATCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-68 ENSMUSG00000076549 ENSMUST00000103350 1 1 1 60 6 69255317 69255335 TCAGCTTCCTGCTAATGAG 59 69255097 69255115 TGGGTGAGAACAATTTGTC 57 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 IGKV5-43 ENSMUSG00000076567 ENSMUST00000103368 3 1 1 70 6 69773625 69773643 CCAGAGGTGATATTGTGCT 59 69773573 69773591 AAGACTGACGCTATCTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 March10 ENSMUSG00000078627 ENSMUST00000100333 2 1 2 172 11 105263328 105263346 CCATCTTTCCCACCTTCTC 59 105258400 105263192 TTTGGTGCCACATATGAGG 59 NA Mus musculus 50 Vps25 ENSMUSG00000078656 ENSMUST00000107280,ENSMUST00000042477,ENSMUST00000100414,ENSMUST00000007533 2 4 4 85 11 101117402 101118200 TTACCAATGGGTTTCCAGG 59 101118248 101118267 CTTCATCCTCTGTGTCTTCC 59 NA Mus musculus 50 A2BE20_MOUSE ENSMUSG00000078884 ENSMUST00000109002 2 1 4 68 2 176139782 176140952 CTTGGAAGGCATGAAAGAC 58 176140984 176141002 AAAGGCTTTACCACATGGA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 A2BE20_MOUSE ENSMUSG00000078896 ENSMUST00000109042 2 1 3 68 2 175303886 175305056 CTTGGAAGGCATGAAAGAC 58 175305088 175305106 AAAGGCTTTACCACATGGA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 4930402F06Rik ENSMUSG00000079421 ENSMUST00000113010 1 1 2 128 2 35245118 35246002 CCCTTTCAGCATAAAGAAACTG 59 35236011 35236029 TTAGTAGCTCTCATGCCCA 59 NA Mus musculus 50 mmu-mir-106a ENSMUSG00000065456 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 TRAJ30 ENSMUSG00000076899 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Fut9 ENSMUSG00000078766 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Hars ENSMUSG00000001380 ENSMUST00000001416 3 1 1 81 18 36932034 36933188 CGTTATGACCTTACTGTCC 57 36931971 36931989 CCTTTGCTATATGGTAGCG 57 NA Mus musculus 50 Vsig2 ENSMUSG00000001943 ENSMUST00000002008,ENSMUST00000115024 2 2 3 161 9 37349063 37349950 GGTTCAAGATGAAGTGTCC 58 37350189 37350207 ATAAGAGTCCCAGCTACTC 57 NA Mus musculus 50 Narfl ENSMUSG00000002280 ENSMUST00000002350 1 1 1 80 17 25912016 25912034 CTAAGAAGCCAGGAAGTGG 59 25912078 25913920 TTCTTCCGTCTTGGTTCAC 59 NA Mus musculus 50 Use1 ENSMUSG00000002395 ENSMUST00000110054,ENSMUST00000019169,ENSMUST00000110053 3 3 3 110 8 73893189 73893430 AGAAGGACAATCAGACCCT 59 73893504 73893522 AGTTCACTGACTTCTGTGC 59 NA Mus musculus 50 Akap8l ENSMUSG00000002625 ENSMUST00000050214 3 1 1 80 17 32475454 32475748 GGGACAAATAGAGGCTACG 59 32475392 32475412 CATACCATACCCATAGTTGGT 58 NA Mus musculus 50 Dennd1c ENSMUSG00000002668 ENSMUST00000011623 2 1 1 80 17 57210040 57210353 CTGTTCAAGCAGTTCATCG 59 57209978 57209998 GATCTCTTGCTCAAATTGGTC 59 NA Mus musculus 50 Lamb1-1 ENSMUSG00000002900 ENSMUST00000002979 1 1 1 80 12 31972908 31973073 CCGTATGGTTGTAAATCATGTG 59 31973113 31973132 GTAGCCAGTCTCAGAATCAC 59 NA Mus musculus 50 Sult2b1 ENSMUSG00000003271 ENSMUST00000075571,ENSMUST00000107735 3 2 2 95 7 52989473 52990513 AAGGCTAAGGTGATTTACGT 59 52989397 52989415 ACCAGGGTCCTTTAATTGC 59 NA Mus musculus 50 Crhr2 ENSMUSG00000003476 ENSMUST00000114374,ENSMUST00000003568,ENSMUST00000095897,ENSMUST00000095898 1 4 4 80 6 55043077 55043288 AGACAATCCAATACAGGAAGG 59 55043017 55043036 CAAAGAAGAGCATGTAGGTG 58 NA Mus musculus 50 Ddr1 ENSMUSG00000003534 ENSMUST00000003628,ENSMUST00000097333 2 2 2 96 17 35822004 35822022 GACTTCCCTATCAGTGTGC 59 35821245 35821944 TCAGGAAATCATTCCTGGC 59 NA Mus musculus 50 Calb2 ENSMUSG00000003657 ENSMUST00000003754 3 1 1 80 8 112671544 112671950 ATGTCTAGACTCTTGCCTG 58 112671222 112671240 GGCATTGAACTCTTCTGAG 58 NA Mus musculus 50 Utp20 ENSMUSG00000004356 ENSMUST00000004470 1 1 1 80 10 88270214 88271837 CACTTAGTGTTGACCTTTCC 58 88270153 88270171 TCCACATAATGCTAGCCTC 58 NA Mus musculus 50 Tmed4 ENSMUSG00000004394 ENSMUST00000004508 3 1 1 91 11 6173806 6173826 ATAAGTTAACAGAGCTCCAGC 59 6171795 6173756 TTCACGATACCTCTGATAATCC 59 NA Mus musculus 50 Senp3 ENSMUSG00000005204 ENSMUST00000005336,ENSMUST00000094071,ENSMUST00000066760 3 3 3 87 11 69488026 69488044 TCTCAGTTGATGTAAGGCG 59 69487774 69487977 TACTTGGCAATATGCTTAGGG 59 NA Mus musculus 50 Wbscr22 ENSMUSG00000005378 ENSMUST00000085984,ENSMUST00000071677,ENSMUST00000005512 1 3 3 80 5 135532243 135532720 AGCAAAGAAGTTCTACCTCTG 59 135531931 135531949 TCTGCATCCTGACTTTCAG 59 NA Mus musculus 50 1700037C18Rik ENSMUSG00000005983 ENSMUST00000115859,ENSMUST00000061056 3 2 3 171 16 3906295 3906853 CTGGGAAATACAGCTTCCA 59 3906141 3906159 TCCTATGTCCTCTCCAAGG 59 NA Mus musculus 50 Mobkl1a ENSMUSG00000006262 ENSMUST00000113229,ENSMUST00000006424 1 2 2 86 5 89182340 89185129 TTCGTTCAGGAGTTCAACC 59 89185177 89185197 TTATCTGTCCTTTGAGGTGAG 59 NA Nonspecific Mus musculus 50 Tfpt ENSMUSG00000006335 ENSMUST00000058880,ENSMUST00000108643 3 2 3 91 7 3572065 3572386 CAGTGCAGATTAAGGTTGAG 58 3571992 3572010 GTAGCAATTTGTCTGGCTC 58 NA Mus musculus 50 Prl7a1 ENSMUSG00000006488 ENSMUST00000095924,ENSMUST00000006659 1 2 2 93 13 27732576 27732594 ACTATCCATCAAGGGACTG 58 27731750 27732520 ACTGATGGTAAATATCCTGC 57 NA Mus musculus 50 Slc5a6 ENSMUSG00000006641 ENSMUST00000080431,ENSMUST00000114668,ENSMUST00000114665,ENSMUST00000006817 3 4 4 130 5 31345424 31345442 ATCTTCCGATTTGGAACCC 59 31345007 31345331 AGCTCTAGGTACTCATAGGC 59 NA Mus musculus 50 Cdk4 ENSMUSG00000006728 ENSMUST00000006911 3 1 1 81 10 126501706 126501725 ATATAGACCAGGACCTGAGG 59 126501767 126501901 CGCATTAGATCCTTAATGGTC 58 NA Mus musculus 50 Pole ENSMUSG00000007080 ENSMUST00000112482,ENSMUST00000007296 2 2 3 80 5 110718330 110718348 GTTTGGTTTCGAAAGGCTG 59 110718389 110718817 TCATCTAAGATCTCAGTAGGGT 59 NA Mus musculus 50 Scube2 ENSMUSG00000007279 ENSMUST00000007423 1 1 1 80 7 116944159 116948131 ACATACGATGAGGACTACC 57 116944097 116944115 TTCCTGATGGTTCTCAGAG 58 NA Nonspecific Mus musculus 50 Mkl2 ENSMUSG00000009569 ENSMUST00000009713 1 1 1 84 16 13384441 13385711 GATTATAGGTGTGGTGAAGGA 58 13385757 13385775 TGGAGACAAAGCATCACTG 59 NA Mus musculus 50 Optc ENSMUSG00000010311 ENSMUST00000010455,ENSMUST00000097571 2 2 2 81 1 135794963 135794981 AACAACATGCTGGATTCCA 59 135794529 135794921 TGGTCTCGATCATGTTATTCTG 59 NA Mus musculus 50 Vac14 ENSMUSG00000010936 ENSMUST00000034190 3 1 1 81 8 113159313 113159332 TAAGAAGAACCCATCCAGTG 59 113159376 113160245 AATCAGGTCATCTGTGGTC 58 NA Mus musculus 50 Tnfaip8l2 ENSMUSG00000013707 ENSMUST00000013851 2 1 1 60 3 94944322 94944340 GTGTCCAAAGAATACACGC 59 94944280 94944299 TGATGAGGTCTTTGATCACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kif1a ENSMUSG00000014602 ENSMUST00000086819,ENSMUST00000112958 3 2 2 82 1 94968892 94969623 CTGAAATGGACTCTGGACC 59 94965081 94965100 CCATGTCAATACGGAGTCTC 59 NA Mus musculus 50 Il17rb ENSMUSG00000015966 ENSMUST00000016110,ENSMUST00000112261 2 2 2 167 14 30819216 30819234 CATAAGCTGGATACTCCGG 59 30816860 30817467 TAGGAGAATGTCCATTTGCC 59 NA Mus musculus 50 Spint4 ENSMUSG00000017310 ENSMUST00000017454 1 1 1 219 2 164524158 164525656 CTACAACGATCCCTGTCTG 59 164526297 164526315 AGAACGCTTCCTCTTATCG 59 NA DesignNoJunction Mus musculus 50 Mpp2 ENSMUSG00000017314 ENSMUST00000017458,ENSMUST00000100398 3 2 2 141 11 101924612 101924631 CATCAAGGAAGTGAATGGAC 58 101923685 101924509 TTTAACAAATACCTGTCGGG 57 NA Mus musculus 50 Myo1c ENSMUSG00000017774 ENSMUST00000102505,ENSMUST00000069057,ENSMUST00000102504,ENSMUST00000108431,ENSMUST00000057572,ENSMUST00000108427 3 6 6 80 11 75471362 75471863 ACCTCATTTGTTTGCAGTG 58 75471907 75471925 CCAGAAATCATCACTGCCT 59 NA Mus musculus 50 Pcgf2 ENSMUSG00000018537 ENSMUST00000103149,ENSMUST00000103148,ENSMUST00000018681 1 3 3 61 11 97552345 97553005 AGTACAAGGTGGAGATCCT 59 97552302 97552323 GTCCATTAAGGTGTAGTATTCC 57 NA DesignRelaxed Mus musculus 50 Slc25a39 ENSMUSG00000018677 ENSMUST00000018821 2 1 2 165 11 102267132 102267529 TACACCAAATCATCCTCCG 59 102266372 102266390 GCACAATCTTCACAAAGGC 59 NA Mus musculus 50 Gje1 ENSMUSG00000019867 ENSMUST00000020016 2 1 1 213 10 14437222 14437918 TGTGTTAAGCCTCCAACTG 59 14436593 14436611 CAATCACTAGCTGCAATGC 59 NA DesignNoJunction Mus musculus 50 Slc6a15 ENSMUSG00000019894 ENSMUST00000074204 2 1 1 81 10 102870964 102870985 GAACAATTGAAGGGATCATCAC 59 102871027 102872302 AGGAGGCAACAGATAACAG 58 NA Mus musculus 50 E2f7 ENSMUSG00000020185 ENSMUST00000073781 3 1 1 81 10 110204235 110204253 GTTCACGTAACAGAAGAGC 58 110204297 110211706 GTTCTTCATCAATGGAGCTG 58 NA Nonspecific Mus musculus 50 Cabin1 ENSMUSG00000020196 ENSMUST00000001712,ENSMUST00000092412 2 2 2 83 10 75195198 75195216 AACACAGCACATGAGTACC 59 75189753 75195153 GAGAACTTGCACATAGAATCG 59 NA Mus musculus 50 Hmg20b ENSMUSG00000020232 ENSMUST00000105323,ENSMUST00000105324,ENSMUST00000020454 3 3 3 116 10 80810763 80811244 AAAGAGGACTCCAGTTCTG 58 80810188 80810206 TTGGTCCAGAAACTCTTCC 59 NA DesignNoJunction Mus musculus 50 Ncln ENSMUSG00000020238 ENSMUST00000020463 2 1 1 106 10 80956166 80956184 GCACTATCAGAAGGCTCTG 59 80955937 80956096 CAATCTCCATGAATTGCCG 59 NA Mus musculus 50 Fstl3 ENSMUSG00000020325 ENSMUST00000020575 1 1 1 119 10 79244014 79244032 CTACATCTCGTCGTGTCAC 59 79244195 79244213 AAGTTCTCTTCCTCCTCTG 57 NA DesignNoJunction Mus musculus 50 Fabp6 ENSMUSG00000020405 ENSMUST00000020672 3 1 1 106 11 43411051 43412084 CAAGAAGTTCAAGGCTACC 58 43409664 43410981 AGATCTCCACCAACTTGTC 58 NA Mus musculus 50 Osbp2 ENSMUSG00000020435 ENSMUST00000070552,ENSMUST00000101633,ENSMUST00000101632,ENSMUST00000102950 1 4 4 80 11 3612053 3612143 CTCTGGATTGACCAGTCAG 59 3611991 3612009 GTAGGGTACGAACTTCAGC 59 NA Mus musculus 50 Tom1l1 ENSMUSG00000020541 ENSMUST00000020849,ENSMUST00000107869,ENSMUST00000107867,ENSMUST00000107868 1 4 4 82 11 90517758 90519039 TTTCAGGCCTAAGTGTCAG 59 90517694 90517712 TAGTAAATCCCTCTGTGGC 58 NA Mus musculus 50 Kif1c ENSMUSG00000020821 ENSMUST00000102554,ENSMUST00000094499,ENSMUST00000072187 1 3 3 80 11 70538614 70538632 ACTTGGAGAATCAGTACCG 58 70538676 70539405 TGTCAGAGTCTGCATACAG 58 NA Mus musculus 50 Nxn ENSMUSG00000020844 ENSMUST00000021204 1 1 1 87 11 76075098 76075116 AGCTGAGAAGATCATTGCC 59 76072235 76075047 GTCAGTCATGTCATCCTCC 59 NA Mus musculus 50 Ywhae ENSMUSG00000020849 ENSMUST00000067664,ENSMUST00000108422 3 2 2 90 11 75565503 75565522 TAATCAGCAGCATTGAACAG 58 75565575 75569086 TCAGTTTCAACCATTTGCC 58 NA Mus musculus 50 Alox8 ENSMUSG00000020891 ENSMUST00000021262,ENSMUST00000094078 1 2 2 80 11 68999518 68999538 GTCCAGTATATCACCATGGTG 59 68999376 68999476 AACACAAGAGTCGAACTGG 59 NA Mus musculus 50 Stx8 ENSMUSG00000020903 ENSMUST00000021286,ENSMUST00000108675,ENSMUST00000021285 2 3 3 86 11 67783300 67783318 AGATAGCCCAAGAAATCGC 59 67783368 67786747 TTGTCAAGGTAAGCTTCGG 59 NA Mus musculus 50 Ngb ENSMUSG00000021032 ENSMUST00000110177,ENSMUST00000021420 2 2 2 164 12 88441054 88441647 ATTAGGAAGGTGATGCTAGTG 59 88439461 88439479 CTTCTCCAGCATGTAGAGC 59 NA Mus musculus 50 1700020O03Rik ENSMUSG00000021254 ENSMUST00000071106,ENSMUST00000110212 2 2 2 85 12 87601627 87601645 AGTAGAAAGGATGGACTCC 57 87601694 87602574 CATGGTATCCTCTTTGAGC 57 NA Mus musculus 50 Vash1 ENSMUSG00000021256 ENSMUST00000021681 2 1 1 80 12 88029229 88029862 CTGGGAATTTACCTCACCA 58 88029904 88029924 GTAGTTCCCTGAGAAATAGGT 58 NA Mus musculus 50 Zkscan3 ENSMUSG00000021327 ENSMUST00000070785,ENSMUST00000116434,ENSMUST00000091757,ENSMUST00000116433,ENSMUST00000019612 2 5 5 90 13 21486688 21486707 CTCAGAAAGTAGCCAGATGG 59 21486439 21486634 CCACATGAGTGACTCTGAC 59 NA Mus musculus 50 NM_025750.2 ENSMUSG00000021415 ENSMUST00000021852 2 1 1 83 13 35043387 35044818 AACAGTAGGAGAACCACAG 58 35044865 35044883 GGCACTATTTGATGCTGTC 58 NA InUTR Mus musculus 50 Zfyve16 ENSMUSG00000021706 ENSMUST00000022217 1 1 1 80 13 93278993 93279966 GTTGGTGCTTTATTCCTCAG 58 93278932 93278951 ACAATAATTTCTGCCTGTCC 58 NA Mus musculus 50 Itih4 ENSMUSG00000021922 ENSMUST00000006703,ENSMUST00000078490 1 2 2 80 14 31703084 31703102 GACTGGGAATGTATGAGCT 58 31703143 31703303 CAAAGATGTAGATGTCCATCTG 58 NA Mus musculus 50 Fgf9 ENSMUSG00000021974 ENSMUST00000022545,ENSMUST00000074654 2 2 2 94 14 58702050 58702069 TTATCAGTATAGCAGTGGGC 58 58702126 58728172 TTCTGATCCATACAGCTCC 58 NA DesignNoJunction Mus musculus 50 Bmp1 ENSMUSG00000022098 ENSMUST00000022693,ENSMUST00000072686,ENSMUST00000111001 2 3 4 104 14 70892287 70892307 AATTACCCAGACGATTATCGG 59 70892070 70892221 ACGCTCAATCTCAAAGGAC 59 NA Mus musculus 50 Dok2 ENSMUSG00000022102 ENSMUST00000022698 1 1 1 101 14 71175855 71175873 AGTTGTATAGCAGCTCCAC 59 71176682 71176700 GAGTATAGGACCCTCGGAG 59 NA DesignNoJunction Mus musculus 50 Fbxo32 ENSMUSG00000022358 ENSMUST00000022986 2 1 1 87 15 58023884 58023902 AAAGTCACAGCTCACATCC 59 58023014 58023836 GTCTTCAAGAACTTTCAGTACC 58 NA Mus musculus 50 Cyp2d26 ENSMUSG00000022445 ENSMUST00000006094 1 1 1 73 15 82623042 82623138 GAACATCCCTTCAATCCCA 59 82622987 82623005 CGAGCATAAATGAGGGAGG 59 NA DesignNoJunction Mus musculus 50 Ets2 ENSMUSG00000022895 ENSMUST00000023612 2 1 1 81 16 95931475 95933266 GATTCTGTCTCCCATGACTC 59 95933310 95933328 TTAAGGCTTGGCTCATCAC 59 NA Mus musculus 50 Itsn1 ENSMUSG00000022957 ENSMUST00000088993 2 1 16 243 16 91899852 91899870 GAGAAGGAGAACTCAGACC 58 91909087 91909460 GTTGCTCTTTCCATGTGAC 59 NA DesignRelaxed, InUTR Mus musculus 50 Racgap1 ENSMUSG00000023015 ENSMUST00000023756 3 1 1 80 15 99473360 99473379 ATTTGTGGACTCTGTTTGAG 58 99470236 99473317 CCTGGATGAATTCAATGCT 57 NA Mus musculus 50 Soat2 ENSMUSG00000023045 ENSMUST00000023806 1 1 1 80 15 101984444 101984703 CTGATCGATGAGCTAATGGA 59 101984746 101984764 GATGATCAGGACGCATAGG 59 NA Mus musculus 50 Bsg ENSMUSG00000023175 ENSMUST00000067036,ENSMUST00000105381 1 2 2 86 10 79172565 79172813 AAGTACATAGTGGACGCAG 59 79172863 79172881 CACATTGATCTCGCTTCTG 58 NA Mus musculus 50 Wdr4 ENSMUSG00000024037 ENSMUST00000024837 2 1 1 178 17 31636012 31636030 GGATGTTGTGTTTGAGGAG 58 31633862 31635449 TACCAACAGAACCTTCCAG 58 NA Mus musculus 50 Twsg1 ENSMUSG00000024098 ENSMUST00000024906 2 1 1 255 17 66287238 66298013 CAAATGCCTCATTCAGGAG 58 66279014 66279032 GAAGGAGACGATGTTCCAG 59 NA DesignNoJunction Mus musculus 50 Mrpl28 ENSMUSG00000024181 ENSMUST00000025014 3 1 1 128 17 26262326 26262431 ACAAGTACAGGAGCTTTGTC 59 26263227 26263246 CTACGTAGACCTTGAACAGG 59 NA Mus musculus 50 Rdbp ENSMUSG00000024369 ENSMUST00000097343 1 1 1 84 17 34989596 34990378 GGAAGTTAAAGGACCCAGAG 59 34990425 34990443 TCCTGTAGGTCCTCATCAG 59 NA Mus musculus 50 Sall3 ENSMUSG00000024565 ENSMUST00000025457,ENSMUST00000057950 3 2 2 132 18 81166633 81167928 AATCTCAAGGTACACATGGG 59 81166520 81166539 CCTTCTGGAACATCTCAGAG 59 NA Mus musculus 50 Fech ENSMUSG00000024588 ENSMUST00000091055,ENSMUST00000025484 1 2 2 83 18 64634762 64634781 CATCAAGATGTGGACTTCCA 59 64630458 64634716 TATTTGTGAGGTGCTGTGG 59 NA Mus musculus 50 Rbm22 ENSMUSG00000024604 ENSMUST00000025506 3 1 1 81 18 60726172 60727035 CCATACAGACATGAGAAGC 57 60727080 60727098 CGTTGATTCCATAGTACCG 57 NA Mus musculus 50 Ms4a4d ENSMUSG00000024678 ENSMUST00000025581 3 1 1 91 19 11627370 11629303 AAAGCCATGATCATCAGCA 59 11629358 11629376 GAAATCACACTGATGACGC 59 NA Mus musculus 50 Smc3 ENSMUSG00000024974 ENSMUST00000025930 2 1 1 80 19 53713234 53713254 TTACTCGAGTAGAGACTTACC 57 53713293 53713835 CTCTCAGTTCATTAAGTTCCTG 58 NA Mus musculus 50 Aldh18a1 ENSMUSG00000025007 ENSMUST00000025979 3 1 1 97 19 40652165 40652272 TGAAGGAGATGGCAATTCC 59 40652086 40652105 GTACTGTGTAAACATGGCCT 59 NA Mus musculus 50 Gps1 ENSMUSG00000025156 ENSMUST00000100134,ENSMUST00000116305,ENSMUST00000106143,ENSMUST00000026153 2 4 4 60 11 120647988 120648090 TCAACGTCATCAAGGTCAG 59 120648111 120648132 CTGACATAGCTTAACACATGAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Obfc2b ENSMUSG00000025374 ENSMUST00000026439 3 1 1 106 10 127845652 127845761 ACCAAAGGGTATGCTTCAG 59 127845427 127845445 GGGACTTCGGAATAAACCA 59 NA Mus musculus 50 Pde6g ENSMUSG00000025386 ENSMUST00000026452 2 1 1 101 11 120311808 120311827 CAAACAAGGCAGTTCAAGAG 59 120309476 120309922 GATGACGGTGATATCTGTCC 59 NA Mus musculus 50 Pdgfa ENSMUSG00000025856 ENSMUST00000110897,ENSMUST00000110896,ENSMUST00000076095,ENSMUST00000046901 1 4 4 99 5 139464375 139464393 TTGGAGACAAGTCTGAGAG 58 139462323 139464313 TGGCTTCCTCAATACTTCTC 59 NA Mus musculus 50 Sgol2 ENSMUSG00000026039 ENSMUST00000027202 2 1 1 81 1 58076517 58076535 AGTCTTCACACCCAATGAG 59 58076578 58081639 CTCCTCATCTTGCTTCTAAGG 59 NA Mus musculus 50 Epha4 ENSMUSG00000026235 ENSMUST00000027451,ENSMUST00000113540 3 2 2 88 1 77384547 77385055 AGGAGTTGGTGAATTTGGA 58 77384477 77384495 CTTTCAGAGTCTTGATGGC 58 NA Mus musculus 50 5830417C01Rik ENSMUSG00000026502 ENSMUST00000027783 3 1 1 80 1 180174603 180179376 CTTTATCAGAGATTCTCTGTGG 57 180179417 180179435 GAAAGGGTATACAGGAGCT 58 NA Mus musculus 50 Ptf1a ENSMUSG00000026735 ENSMUST00000028068 1 1 1 64 2 19368239 19368257 TTATCATCTGCCATCGAGG 58 19368616 19368634 AGGAGGGAGACCATAATCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pip4k2a ENSMUSG00000026737 ENSMUST00000006912,ENSMUST00000114645,ENSMUST00000114642 3 3 3 89 2 18767545 18767565 CATCCTTACTCATTACGATGC 58 18766062 18766080 TTCACAGTCGAGATCTCAG 58 NA DesignNoJunction Mus musculus 50 Cdc25b ENSMUSG00000027330 ENSMUST00000028804,ENSMUST00000079857 1 2 2 80 2 131019900 131020080 TCTCACCAGAAACTATGGTG 59 131020123 131020141 ATCTGCAGTCCACAATGAC 59 NA Mus musculus 50 Smox ENSMUSG00000027333 ENSMUST00000110182 3 1 10 198 2 131342165 131350482 GATTTATACAACGAGCCCA 57 131350643 131350662 GAGTTAGTGGTTCTTCAAGG 57 NA InUTR Mus musculus 50 2310003C23Rik ENSMUSG00000027573 ENSMUST00000029090,ENSMUST00000078687 1 2 2 80 2 180449522 180449540 CATTGCCTTGATCAACAGC 59 180449584 180451574 AAGTGTTGTTGCTGAAGGT 59 NA Nonspecific Mus musculus 50 Zbtb46 ENSMUSG00000027583 ENSMUST00000029106,ENSMUST00000087409 1 2 2 80 2 181146673 181158131 AGACTCAAATGTAGACCTGAC 59 181146613 181146631 ATGTGAGCATAGAGCTCTG 58 NA Mus musculus 50 Nmd3 ENSMUSG00000027787 ENSMUST00000029358 1 1 1 80 3 69535565 69538975 AAGGAGATTCATGATGGTCTG 59 69539015 69539035 TATACCCTGAAGAAACTCCAC 58 NA Mus musculus 50 Reg4 ENSMUSG00000027876 ENSMUST00000029469 2 1 1 85 3 98028754 98033716 GTCCTGAGCGATATCTTGAG 59 98033764 98033782 CTTAGCTTCCGGAAGTACC 59 NA Mus musculus 50 Jtb ENSMUSG00000027937 ENSMUST00000029546 2 1 1 80 3 90036141 90036355 GGAGAAGCTATCAGTGAGC 59 90036399 90036417 CACGGAGTACACTCTTCAG 59 NA Mus musculus 50 Depdc1a ENSMUSG00000028175 ENSMUST00000029825,ENSMUST00000106041 1 2 2 85 3 159179093 159179870 CTACAAGACAAATCAGACGA 57 159183796 159183815 TTGGTGTCATTACTTCTTGG 57 NA Nonspecific Mus musculus 50 Gabrr1 ENSMUSG00000028280 ENSMUST00000029947 2 1 1 81 4 33244109 33245022 TCGAAAGCTACGCTTATACG 59 33245063 33245084 ATCCTCTCATCTGTCTTTAAGG 59 NA Mus musculus 50 Creb3 ENSMUSG00000028466 ENSMUST00000102944 2 1 1 82 4 43579177 43579195 CTCCTTCTGTCTTCTCCTG 58 43579241 43579349 GGTGCAACACAACATACTC 59 NA Mus musculus 50 Sh3gl2 ENSMUSG00000028488 ENSMUST00000107189 3 1 4 114 4 85025314 85027326 TATAGAACAGGTGAGCCAG 58 85027404 85282714 TCAGGGAACTCTTTCTTCC 58 NA Mus musculus 50 Lypla2 ENSMUSG00000028670 ENSMUST00000105852,ENSMUST00000067567 2 2 2 87 4 135526375 135526395 TCATGTCAAGTACATCTGTCC 59 135525776 135525879 CATCAGGTCAAACCAGGAG 59 NA Mus musculus 50 Cdca8 ENSMUSG00000028873 ENSMUST00000084296,ENSMUST00000097892,ENSMUST00000030690 3 3 3 62 4 124603965 124608317 AAGCTGATCGAGACATCAC 59 124603921 124603940 TCAAAGGTGTCTGAATAGCT 58 NA DesignNoJunction Mus musculus 50 BC008163 ENSMUSG00000028878 ENSMUST00000030696,ENSMUST00000097856,ENSMUST00000036010 2 3 3 75 4 132469734 132472044 ATCGAAAGAAGGTGGATGG 59 132469677 132469695 TTGGTCTTCTGAAGGACAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Tnfrsf4 ENSMUSG00000029075 ENSMUST00000030952 2 1 1 95 4 155388378 155388397 CTATGTCATCCGTGTGAGAC 59 155388455 155389024 TTCACTTCCACTTCGATGG 59 NA Mus musculus 50 Bst1 ENSMUSG00000029082 ENSMUST00000101237,ENSMUST00000030962 2 2 2 94 5 44213506 44213524 GACTTGACTACCAGTCCTG 59 44213581 44216578 GTCTCTTGAATACTGCATGG 58 NA Mus musculus 50 Ablim2 ENSMUSG00000029095 ENSMUST00000114205,ENSMUST00000114210,ENSMUST00000114207,ENSMUST00000114206,ENSMUST00000054598,ENSMUST00000101280,ENSMUST00000114204 2 7 7 92 5 36151944 36154778 AGAGTACATCAGCAAGGAC 58 36154834 36154852 GTGATGTACTTCTCACAGC 57 NA Mus musculus 50 Add1 ENSMUSG00000029106 ENSMUST00000114340,ENSMUST00000114338,ENSMUST00000001108,ENSMUST00000114335,ENSMUST00000052836 3 5 5 83 5 34947429 34947447 GATTTCATGACTGCGAGTG 58 34947492 34948487 CATACCAAGACTCATGTTCAG 58 NA Mus musculus 50 Plb1 ENSMUSG00000029134 ENSMUST00000101377,ENSMUST00000101382,ENSMUST00000101376 3 3 3 83 5 32567323 32572184 CCCAGAAATTCCTCTAGCC 59 32572732 32572750 CATACATCCTGTGGTTGGT 59 NA Mus musculus 50 Crybb3 ENSMUSG00000029352 ENSMUST00000076069 1 1 1 83 5 113506693 113507416 GTCCTTTGCACATTGATGG 59 113506628 113506646 CTACGATCTCCATCTTGCG 59 NA Mus musculus 50 Fscn1 ENSMUSG00000029581 ENSMUST00000031565 1 1 1 89 5 143732355 143733583 AACATCAAAGACTCCACGG 59 143733636 143733654 AAGGAAGAAATCCACAGGG 59 NA Mus musculus 50 4921520G13Rik ENSMUSG00000029607 ENSMUST00000110717 1 1 2 150 5 144655641 144655659 TTACAGACTACTGAGCCAG 57 144652680 144652698 CATCAGGTGAAGGGTAGTG 59 NA DesignNoJunction Mus musculus 50 Arpc1a ENSMUSG00000029621 ENSMUST00000031625 2 1 1 81 5 145867933 145867951 GTGGACAAGCAAGATTGTC 59 145867995 145869255 ACTCTAGGGTCTTGAAATCC 58 NA Mus musculus 50 Cyp3a25 ENSMUSG00000029630 ENSMUST00000068317 1 1 1 97 5 146804930 146806451 AACTCAAGGAGATGTTCCC 58 146804851 146804869 TTTCATACTGATGGGCTCC 59 NA Mus musculus 50 Cdk8 ENSMUSG00000029635 ENSMUST00000110605,ENSMUST00000031640,ENSMUST00000110604 2 3 3 228 5 147111093 147111111 ATCCCATATCCCAAACGAG 58 147111418 147113161 GATTGGAACGCTGATAGTC 57 NA DesignRelaxed Mus musculus 50 C130038G02Rik ENSMUSG00000029651 ENSMUST00000110517 3 1 5 91 5 149107152 149115064 CACAAAGTCCAAGATTGCG 59 149115119 149115137 TCTGCTGGTTCTTCATCTC 58 NA Nonspecific Mus musculus 50 Tbxas1 ENSMUSG00000029925 ENSMUST00000101514 2 1 2 171 6 38869237 38898555 AATGGTACTCCATGTCAGC 59 38902055 38902073 GTACTTGTCCTTTGAAGGC 58 NA DesignNoJunction Mus musculus 50 Chl1 ENSMUSG00000030077 ENSMUST00000066905,ENSMUST00000089225,ENSMUST00000032163 1 3 3 80 6 103645429 103645447 CACAGTTTGAAGTTGTCCT 57 103645491 103648111 GTCAATCACTATTCTGCCA 57 NA Mus musculus 50 Tmtc1 ENSMUSG00000030306 ENSMUST00000060095,ENSMUST00000100772 1 2 2 80 6 148284260 148284784 GTCATCAGTTATGTGACTGTC 58 148284200 148284218 GTCTTGCTCTGAGAAGAGG 59 NA Mus musculus 50 Mark4 ENSMUSG00000030397 ENSMUST00000085715 2 1 1 82 7 20020260 20022295 AGAGAATTGAGGTGATGGTG 59 20020197 20020215 CACCTCGTTGTACTTCTGG 59 NA Mus musculus 50 Ttyh1 ENSMUSG00000030428 ENSMUST00000032594,ENSMUST00000086398,ENSMUST00000079415,ENSMUST00000086397,ENSMUST00000108591 2 5 5 88 7 4082910 4082928 GGAGGAGACACTGAATGTG 59 4082980 4084689 CTGAGCCATAGTCCTTGTG 59 NA Mus musculus 50 Slc7a10 ENSMUSG00000030495 ENSMUST00000001854 3 1 1 92 7 35985389 35985408 TCATCATTATCCTCACTGGG 58 35985462 35985745 TCATGGACTCTGTGAATCTG 59 NA Mus musculus 50 Mtmr10 ENSMUSG00000030522 ENSMUST00000032736 1 1 1 86 7 71453027 71453045 TAGCTCATTATTCCCAGCC 58 71453095 71458978 CCTTGTTGGCTGAATTGTG 59 NA Mus musculus 50 Iqgap1 ENSMUSG00000030536 ENSMUST00000032751 3 1 1 80 7 87883201 87883570 ACAAGACTCTCATCAATGCT 59 87883140 87883158 CCTGATCACTTTGGTCCAG 59 NA Mus musculus 50 Ctsc ENSMUSG00000030560 ENSMUST00000098313 2 1 2 71 7 95435420 95435438 TCAGTCAGTTGTTCATGCA 59 95435473 95435795 CAACCAGTTTGTTCCTCAG 58 NA DesignNoJunction Mus musculus 50 Eed ENSMUSG00000030619 ENSMUST00000107234,ENSMUST00000032850 2 2 2 80 7 97103570 97104055 TCCTCATAAAGCCAAATGC 58 97103508 97103527 CTATCCCTACTGAAACTGGT 58 NA Mus musculus 50 Pgm2l1 ENSMUSG00000030729 ENSMUST00000084935,ENSMUST00000054436 3 2 2 80 7 107401818 107404052 ACCTTTCGTACCATATGCC 59 107404096 107404114 TCCTCTTTGCGGTTATGAG 59 NA Mus musculus 50 Zkscan2 ENSMUSG00000030757 ENSMUST00000042470 2 1 1 81 7 130638873 130642115 CCATTACCTAAGAATGCTCAC 58 130638812 130638830 TTGTCACTTCCTCATCGAG 59 NA Mus musculus 50 Mrpl17 ENSMUSG00000030879 ENSMUST00000033170 2 1 1 80 7 112959011 112959029 ATCGATTATGGAAAGCTGG 57 112958644 112958967 GATCAAGTCCTTCTCTGTG 57 NA Mus musculus 50 Crym ENSMUSG00000030905 ENSMUST00000033198 1 1 1 81 7 127338893 127338911 ATCATCACAGTCACCATGG 59 127334079 127338848 CTCCAACAGCATTGATGTG 59 NA Mus musculus 50 Trim30 ENSMUSG00000030921 ENSMUST00000076922 3 1 1 82 7 111560749 111560767 AAGCTCCAGATCTGAAAGG 58 111560167 111560437 ATGTAGAGTCATATGAACCCAG 59 NA Mus musculus 50 4631426J05Rik ENSMUSG00000030930 ENSMUST00000077472,ENSMUST00000080215 1 2 2 80 7 139454415 139454433 CAAGACTTCATCCATGCCT 59 139439691 139454371 GTCTGAGTACAACCTCTCC 58 NA Mus musculus 50 4930513O06Rik ENSMUSG00000031270 ENSMUST00000033625 2 1 1 97 X 135625504 135625522 AGACTATGGATGCATGCAC 59 135625583 135626161 TATGGTCATTCACAGTGCC 59 NA Mus musculus 50 Taf1c ENSMUSG00000031832 ENSMUST00000093099 1 1 1 111 8 122123612 122123729 GCTTCATATAACAGGAGAGGG 59 122123521 122123539 CTTCTTAGGTTCCAGCAGG 59 NA Mus musculus 50 1110019N10Rik ENSMUSG00000031879 ENSMUST00000093234 2 1 1 126 8 107164454 107164875 GGTTCAAGATGGATGTACAC 58 107163914 107163932 TTAACAACCTCAAGCAGGT 59 NA Mus musculus 50 Tmem170 ENSMUSG00000031953 ENSMUST00000034431 3 1 1 109 8 114390392 114393501 TGGAATCTTGACAAGTGCA 59 114390301 114390319 CCACTACACAGAACGTCTG 59 NA Mus musculus 50 9030425E11Rik ENSMUSG00000032024 ENSMUST00000034522 3 1 2 85 9 40580539 40580558 ATTGTGTATTATTGGCAGCG 58 40580603 40582458 GGGTTGTTGTAATCAATTCTGG 59 NA Mus musculus 50 Hyou1 ENSMUSG00000032115 ENSMUST00000066601 1 1 1 80 9 44193379 44193658 AGGATCTTCGGGTATTTGG 58 44193701 44193720 CGGGATATTTCTTGAAGCTC 58 NA Mus musculus 50 Anxa2 ENSMUSG00000032231 ENSMUST00000034756 3 1 1 84 9 69315124 69315142 GTCAGTCAAACCCTACACC 59 69315190 69323870 CTCATCCACTCCTTTGGTC 59 NA Mus musculus 50 Crabp1 ENSMUSG00000032291 ENSMUST00000034830 3 1 1 99 9 54616214 54616233 GAACAAGATTCACTGCACAC 59 54616295 54620641 GCCAAATGTCAGGATTAGC 58 NA Mus musculus 50 Slc24a6 ENSMUSG00000032754 ENSMUST00000076051,ENSMUST00000068326,ENSMUST00000111890 2 3 3 171 5 120971097 120971116 CCTTCACTGCACTCTATCTC 59 120971868 120974023 GACTCAGACAGCAACTCTG 59 NA Mus musculus 50 Fanca ENSMUSG00000032815 ENSMUST00000035495 2 1 1 80 8 125802239 125805104 ACTTCCACCAAAGTTCGAG 59 125802177 125802195 TATCCTTGTTTCCTGTGCG 59 NA Mus musculus 50 S100b ENSMUSG00000033208 ENSMUST00000036387 1 1 1 91 10 75719910 75722683 TCCTGGAGGAAATCAAGGA 59 75722738 75722756 GAACTCCTGGAAGTCACAC 59 NA Mus musculus 50 Rtp1 ENSMUSG00000033383 ENSMUST00000038730 2 1 1 60 16 23429353 23429372 CGAAGACATGTGTAAGAGTG 58 23429394 23429413 CATCTTCTCGTAGAAGACCT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Idua ENSMUSG00000033540 ENSMUST00000112563,ENSMUST00000071650,ENSMUST00000045900 1 3 3 80 5 109108760 109108778 GGACTTTGATGACAAGCAG 58 109108819 109109139 CCATACCTACCAATGTATCTCC 59 NA Mus musculus 50 Foxh1 ENSMUSG00000033837 ENSMUST00000037824 2 1 1 250 15 76499570 76499677 TAATCGGTGCTTCCATAAGG 59 76499339 76499357 ACTTGATGCTGAAACCCTC 59 NA DesignNoJunction Mus musculus 50 Cct2 ENSMUSG00000034024 ENSMUST00000047672 3 1 1 80 10 116498406 116498424 ATCATCTCAGGTTGGAGAG 58 116497897 116498363 TTCATCAGAACCATGATCCA 58 NA Mus musculus 50 Evpl ENSMUSG00000034282 ENSMUST00000037007 3 1 1 82 11 116095521 116095542 TGTATGAGAAGATGGTACTTCC 59 116094817 116095479 GACCAGATTCTGTTTCTGCT 59 NA Mus musculus 50 Sec22a ENSMUSG00000034473 ENSMUST00000043521 1 1 1 94 16 35329643 35329662 TGTGGCGTTTATCCTTAGTC 59 35318940 35329586 GATCCTCACCATCACTCTG 59 NA Mus musculus 50 Mon2 ENSMUSG00000034602 ENSMUST00000073792,ENSMUST00000037557 2 2 2 80 10 122489358 122496251 TTTGGCAGCATTGAAAGAG 58 122489296 122489314 GTGATCTTTGGTTCCTTGG 58 NA Mus musculus 50 Tle6 ENSMUSG00000034758 ENSMUST00000072020 3 1 1 82 10 81057327 81057967 ATTTCTGAAGCCCTTGTCC 59 81057263 81057281 TCTCTAATTGCCAGAGTGC 59 NA Mus musculus 50 Gipc3 ENSMUSG00000034872 ENSMUST00000045102 3 1 1 92 10 80804104 80804246 CCTTCATCAAGAGAATCAAGG 58 80804032 80804050 TAGAGTGGTCATTGATGGC 59 NA Mus musculus 50 Hrh2 ENSMUSG00000034987 ENSMUST00000038101 3 1 1 152 13 54310321 54310339 CTGAGGTTGAACAACTCTC 57 54316594 54316613 ACAACTTGAGTGACTCAGTC 59 NA DesignNoJunction Mus musculus 50 Nek11 ENSMUSG00000035032 ENSMUST00000038648 2 1 1 85 9 105202726 105215758 AAGTCTGACATCTGGTCAC 58 105202659 105202677 ACAGACAAGAAACTGGAGC 59 NA Mus musculus 50 Epn1 ENSMUSG00000035203 ENSMUST00000108570,ENSMUST00000098845,ENSMUST00000045277 2 3 3 120 7 5044976 5045506 GGAGCACGATAAGGAAGAG 59 5046560 5046579 ATCAGCAAGATCCATGAGAG 59 NA Mus musculus 50 Caps2 ENSMUSG00000035694 ENSMUST00000092176,ENSMUST00000105273 2 2 2 80 10 111632048 111632773 GTCTTATCAAGAAATGGACGC 59 111632814 111632833 ATACACAGTTAGGGACTGGT 59 NA Mus musculus 50 Colec11 ENSMUSG00000036655 ENSMUST00000036136 3 1 1 82 12 29280197 29280835 TGGAGAACCTGGTATTCCA 59 29280133 29280151 TTGTCAGTTGAGTGACCTG 59 NA Mus musculus 50 Tmem185b ENSMUSG00000037015 ENSMUST00000069755 1 1 1 60 1 121423568 121423586 GACAGGATTATCCACTGGC 59 121423610 121423628 ATGACATGAGGATCCACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000008462 ENSMUSG00000037028 ENSMUST00000075999 1 1 1 80 4 101583023 101583939 AACACTTGTTCAGATGCCT 59 101583980 101584001 GTTTGAAGTCTGACTTTGAGAG 59 NA Nonspecific Mus musculus 50 Smpd1 ENSMUSG00000037049 ENSMUST00000046983 1 1 1 86 7 112705115 112705133 ATCAACTCCACAGATCCTG 58 112705181 112705440 TATATGCACTTTGTCTCCTCG 59 NA Mus musculus 50 Psd ENSMUSG00000037126 ENSMUST00000041391,ENSMUST00000096029 3 2 2 60 19 46387414 46387804 CCTGGAGTTTGAGAAATCC 57 46387372 46387390 CTTCATCTTGACTCGAAGC 58 NA DesignRelaxed Mus musculus 50 Zmat4 ENSMUSG00000037492 ENSMUST00000042352 2 1 1 84 8 25039786 25125596 GAACTGAGAGGTCTGAGAC 58 25125644 25125662 GCAGATGTGCATGATACTG 58 NA Mus musculus 50 Slc24a2 ENSMUSG00000037996 ENSMUST00000107157,ENSMUST00000044990 1 2 5 168 4 86722052 86872795 CAAGCAAAGTCACCTACAG 58 86695827 86719098 ATGATCCAAGTTCTTCAGC 57 NA Mus musculus 50 Cer1 ENSMUSG00000038192 ENSMUST00000107238,ENSMUST00000048430 2 2 2 60 4 82530712 82530730 CTGGAAGAAACCTGAGACC 59 82530670 82530688 TGAGACATGATCGCTTTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fbxo8 ENSMUSG00000038206 ENSMUST00000040218,ENSMUST00000110322 2 2 2 87 8 59043615 59043633 TACCTGAATGCAACTGACC 59 59043684 59048091 ATTTACACAACCCTTGCCA 59 NA Mus musculus 50 Cd160 ENSMUSG00000038304 ENSMUST00000107074,ENSMUST00000047702 3 2 2 103 3 96606325 96609472 TTCTAGTCACAGGGAACCA 59 96606240 96606258 CTTTACTTGCAGGAAGCCT 59 NA Mus musculus 50 Osbpl7 ENSMUSG00000038534 ENSMUST00000090020,ENSMUST00000046878 3 2 2 104 11 96913885 96913903 TGCTCAAGAAGAGGAAGTG 59 96914128 96915438 CCTTGGTGATATCTTGTCGA 59 NA Mus musculus 50 Sp6 ENSMUSG00000038560 ENSMUST00000047997,ENSMUST00000107622 3 2 2 86 11 96883014 96883032 GACCTGGAAAGTGACAGTC 59 96883081 96883100 GAACCACGATTCATAGTGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 1700129I04Rik ENSMUSG00000038570 ENSMUST00000040353 1 1 2 60 7 89792344 89794163 TTAAGTCAGATTATCGCCCT 58 89792303 89792322 TATTCTTCAGGTATGTGGCG 59 NA DesignNoJunction Mus musculus 50 Mcl1 ENSMUSG00000038612 ENSMUST00000037947 1 1 1 66 3 95463886 95463904 TCTTGTAAGGACGAAACGG 59 95464632 95464650 GAAGAACTCCACAAACCCA 59 NA DesignNoJunction Mus musculus 50 Birc7 ENSMUSG00000038840 ENSMUST00000108875 2 1 2 135 2 180667915 180667933 CGTCTCCATAGTCTTCGTG 59 180668031 180668534 AGTGTAGTTCCTGGTTTAGG 58 NA InUTR Mus musculus 50 Nrn1 ENSMUSG00000039114 ENSMUST00000037623 1 1 1 121 13 36822064 36822082 GATGCAGTCTTTAAGGGCT 59 36818711 36821979 AAATCCTCCCAGTATGTGC 59 NA Mus musculus 50 Tekt5 ENSMUSG00000039179 ENSMUST00000043415,ENSMUST00000115831 3 2 2 80 16 10383018 10386165 TCCAGATTCGAGATAACCG 58 10382956 10382975 CGTCAATATACTGTGCAGAG 58 NA Mus musculus 50 Alg1 ENSMUSG00000039427 ENSMUST00000100196,ENSMUST00000049207 2 2 2 80 16 5236491 5236509 CACAACTATGGCTACTCCA 58 5236553 5238747 CTTCTCATACCATTTGGCC 58 NA Mus musculus 50 Zfp597 ENSMUSG00000039789 ENSMUST00000090522 2 1 1 81 16 3866727 3871165 AATTTGGACTCGATAGGAGG 58 3866665 3866683 ACAGCTCTTCAAGTTCCAC 59 NA Mus musculus 50 A530088I07Rik ENSMUSG00000039934 ENSMUST00000036031 2 1 1 80 5 20723284 20727049 TGTTTGGGTACAGTTCCTC 59 20727091 20727111 TTCTCTTCTGAGATCAGTAGC 58 NA Mus musculus 50 Rhou ENSMUSG00000039960 ENSMUST00000045487 1 1 1 198 8 126179450 126184778 GGATGAGTTTGACAAGCTG 58 126184940 126184958 TATGAGCACTTTGACGTCC 59 NA DesignNoJunction Mus musculus 50 Klhdc5 ENSMUSG00000040102 ENSMUST00000036003 1 1 1 91 6 147050267 147056220 GATATACCACCCGAGATCG 58 147056275 147056293 GATATGGACGTCACAGGTC 59 NA Mus musculus 50 Scamp2 ENSMUSG00000040188 ENSMUST00000045791 3 1 1 82 9 57428646 57428664 CTATCAGGACTTCTCCACG 58 57428710 57429305 CTGAATGCAACATCCAGAG 58 NA Mus musculus 50 BC052040 ENSMUSG00000040282 ENSMUST00000110918 1 1 1 80 2 115495327 115495348 CTGTTATAAACAGTATGCTGCG 59 115495389 115495754 TCACGATGCACTGATAGAC 59 NA Mus musculus 50 Vprbp ENSMUSG00000040325 ENSMUST00000055009,ENSMUST00000098425 3 2 2 80 9 106731495 106733194 ACCAATCCTTACCAGAATGTC 59 106733233 106733254 TCATCAAATGGATCTGGATCTC 59 NA Nonspecific Mus musculus 50 Stk19 ENSMUSG00000040356 ENSMUST00000046022 2 1 1 82 17 34983115 34983481 GAAACACATGACTCGTACC 58 34983051 34983069 CAAATGTGTTCCGGAAGTC 59 NA Mus musculus 50 Lrrc52 ENSMUSG00000040485 ENSMUST00000036643 1 1 1 60 1 169396539 169396558 CTTCATCGGGATCTTCAGAC 59 169396498 169396517 GATGGAAGTTAGGTTGTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Slc16a11 ENSMUSG00000040938 ENSMUST00000069008,ENSMUST00000094055 1 2 2 85 11 70029098 70029116 TTTCAGTCTTTGCTTTGGG 58 70029165 70029183 TTGATCTAAAGCATGCGGA 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Nrg3 ENSMUSG00000041014 ENSMUST00000042378 1 1 1 80 14 39184510 39184532 TAGAGGTCAGGAAGACTATATCC 59 39184216 39184473 TGGACACATACTTTAAGTCCAG 59 NA Mus musculus 50 Rhod ENSMUSG00000041845 ENSMUST00000048197 3 1 1 64 19 4432796 4432814 GCAGATGAAGGGTAAACCT 59 4432147 4432768 GGTCATAGTCATCTTGCCC 59 NA DesignNoJunction Mus musculus 50 Pglyrp3 ENSMUSG00000042244 ENSMUST00000047660 2 1 1 80 3 91832105 91834565 GCATATCACTTTCTAGTGGG 57 91834608 91834626 TCCATAGGTATGAGAGCCT 58 NA Mus musculus 50 Ccno ENSMUSG00000042417 ENSMUST00000038404 2 1 1 212 13 113779184 113779202 TGACCGTGAATACTCTGGA 59 113779873 113779891 TGAAGTGGAGCTTATGCAG 59 NA DesignNoJunction Mus musculus 50 Prdm10 ENSMUSG00000042496 ENSMUST00000098915,ENSMUST00000074510 1 2 2 95 9 31123834 31123852 TGTATACAGCAGATGGTGC 59 31123911 31126106 TAAACAGAGTCTGTGCAGC 59 NA Mus musculus 50 Hpdl ENSMUSG00000043155 ENSMUST00000055436 3 1 1 61 4 116493120 116493139 GGTAGAGCAATTTCTAACCC 57 116493078 116493096 GAGTGTACAGTCCTACGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hoxa6 ENSMUSG00000043219 ENSMUST00000062829 2 1 1 72 6 52158436 52158454 TTTACCAACAGTCCAACTC 57 52158382 52158400 GAATAGAAACATGAGGCCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 NM_025817.3 ENSMUSG00000043496 ENSMUST00000059421 1 1 1 67 6 53769938 53769956 TACAACCAGATCCGTTCTC 58 53769889 53769907 AGGTACAGCTCCTCTAGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 2410075B13Rik ENSMUSG00000044095 ENSMUST00000056439 2 1 1 86 15 75811556 75811577 TCTATATTGTCCAGTGAGTCTC 58 75811491 75811509 AGATCCTGGATGTGATGGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cryga ENSMUSG00000044429 ENSMUST00000061497 1 1 1 164 1 65147290 65149563 ATTCCATACACCAGCTCTC 58 65147144 65147162 CATCTCATAGAGGACCCAG 58 NA Mus musculus 50 Zfp612 ENSMUSG00000044676 ENSMUST00000058804 3 1 1 81 8 112608279 112608299 CTAGAGGAACGAAAGGATCTG 59 112608341 112612330 CAGTACATTCAGTCCAGAGG 59 NA Mus musculus 50 Kcng3 ENSMUSG00000045053 ENSMUST00000051482 1 1 1 92 17 83987701 84030304 GGGATAATTGAAGCTATCTGC 58 83987629 83987647 TCTCTTGACAAACTCACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Col27a1 ENSMUSG00000045672 ENSMUST00000036300 2 1 1 113 4 62882112 62885248 CTCCTGAAGATGTGGATGTC 59 62885324 62885342 TGAAGATGAAGCCAGATGG 59 NA Mus musculus 50 Sbsn ENSMUSG00000046056 ENSMUST00000080518 3 1 1 107 7 31538485 31539842 GAATGGGTCTCATCAAGGT 58 31540034 31540052 GGGAAGTTGATAAATGGCT 57 NA DesignNoJunction Mus musculus 50 Hs3st2 ENSMUSG00000046321 ENSMUST00000084628 3 1 2 60 7 128644331 128644350 GAGATTCATCACAGACAAGC 58 128644373 128644391 TTTCAAGCAAGGGAATCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr218 ENSMUSG00000046643 ENSMUST00000057548 2 1 1 60 1 175133586 175133604 TAACGCTGTACCTTCTGAC 59 175133627 175133646 TCCAGACGAATAATTGTCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Igbp1b ENSMUSG00000046717 ENSMUST00000054786 3 1 1 60 6 138606008 138606026 GAAGATGAGAATGCCCTCC 59 138605966 138605984 TAGGATGAGTGTCCTTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1437 ENSMUSG00000047100 ENSMUST00000052558 2 1 1 60 19 12396836 12396856 ATCATGGGTTCTCTATCTCAG 58 12396796 12396814 CGTTAGGTCCACAGAAGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cxxc6 ENSMUSG00000047146 ENSMUST00000050826 1 1 2 60 10 62275383 62275402 GAAGCCAATTTATCACACCA 58 62275342 62275360 CATTGTCTCGGGTTAAGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 E330009P21Rik ENSMUSG00000047237 ENSMUST00000054925 3 1 1 82 9 109058920 109060039 AGAGTATGGAATTCAGGCA 57 109058856 109058874 TACAGATAACAGACCTGCC 58 NA Mus musculus 50 BC107230 ENSMUSG00000047257 ENSMUST00000011391 1 1 1 86 9 110743043 110743355 GACTTGTGCTATGGAGACC 59 110743404 110743423 CTTCTCCCATGAGAATACCC 59 NA Mus musculus 50 Rapgef4 ENSMUSG00000049044 ENSMUST00000090826,ENSMUST00000102698,ENSMUST00000028525 2 3 3 80 2 72033713 72033736 GATGACCTAGAGATTATCTACGAC 59 72033775 72034287 TAACTCCCGTTTCACTGTG 59 NA Mus musculus 50 Nrap ENSMUSG00000049134 ENSMUST00000073536 2 1 2 108 19 56452622 56452641 CCATAAGATGAAAGGTGCAG 58 56448947 56452551 CTTGTACTCCACCTCACTC 59 NA Mus musculus 50 Olfr714 ENSMUSG00000049674 ENSMUST00000054629 1 1 1 60 7 114218063 114218081 CACCTGTTCCTCACATCTC 59 114218105 114218123 GTAAGTGAGGCTTAACGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 1700112C13Rik ENSMUSG00000049719 ENSMUST00000055340 1 1 1 95 9 110752300 110752511 CTTACAAAGATCCAAGAACCC 58 110752568 110752586 ATTCTAGTGACCAGGAGCT 59 NA Mus musculus 50 9630050M13Rik ENSMUSG00000050530 ENSMUST00000072955,ENSMUST00000115099,ENSMUST00000062934 3 3 4 115 2 3140757 3140776 AGGACATTACCACGTATCAC 59 3140854 3142105 TTTCAAGCACTTCCTCCTG 59 NA Mus musculus 50 Amigo1 ENSMUSG00000050947 ENSMUST00000106659 1 1 4 82 3 107990952 107990970 GAGACACCTTGACCATCAG 59 107994636 107994655 CTAGTTATAGAGCCCATGGG 58 NA DesignNoJunction Mus musculus 50 9130014G24Rik ENSMUSG00000050994 ENSMUST00000045328 3 1 1 162 10 10149477 10149495 ATGGCAGGATATTGAAGGG 59 10131677 10142472 CAGAATTCGCCATCTTCTC 58 NA InUTR Mus musculus 50 Zfp191 ENSMUSG00000051469 ENSMUST00000066497 3 1 1 72 18 24176180 24176198 GAGAGTGAGCTTGATGACC 59 24175890 24175909 TCTCTTCTACAAGCACTTCC 59 NA DesignNoJunction Mus musculus 50 ENSMUSG00000051555 ENSMUSG00000051555 ENSMUST00000049869 3 1 1 63 13 55723980 55724001 TGGTGATCCTAGTTCTTTACTG 59 55723938 55723956 GATAGTGGATTGAGGCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dcun1d4 ENSMUSG00000051674 ENSMUST00000087181,ENSMUST00000063882 2 2 2 149 5 73925929 73935299 TCCCTACAATGTGATACAACAG 59 73946611 73946630 AGTGTTTATGTCTAGGCTGC 59 NA Mus musculus 50 Olfr796 ENSMUSG00000052012 ENSMUST00000037071 2 1 1 60 10 129045121 129045142 CACTACTCTACCCTAATGAACC 59 129045082 129045100 TGATCCATGAAGTTCCCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4930565N07Rik ENSMUSG00000052477 ENSMUST00000093506,ENSMUST00000064341 2 2 2 61 1 85251120 85251138 TGATGAACAAGCAGAGGAG 59 85250747 85251095 AACTACTTCCCTCTCCTCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Clec12a ENSMUSG00000053063 ENSMUST00000065289 2 1 1 87 6 129303781 129303799 ATCAAGAACCTTTCTGCCA 59 129303849 129304509 GTTTACATTTGTGCTCTGGT 58 NA Mus musculus 50 Mllt11 ENSMUSG00000053192 ENSMUST00000065482 1 1 1 60 3 95024308 95024326 CATCCCAGAACTGGATCTG 59 95024266 95024286 GTAGGTAGGTGTATCTGACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Adamts19 ENSMUSG00000053441 ENSMUST00000052907 3 1 1 80 18 59167068 59167087 CATTACTTAAGACGAGGCCT 59 59167130 59170665 TAGGAGTACCAGGAGATGC 59 NA Mus musculus 50 Oscar ENSMUSG00000054594 ENSMUST00000108645,ENSMUST00000039507 1 2 2 81 7 3562505 3562682 TCAGTTTCGAAGGTTCTGG 59 3562442 3562460 CAGATGAGGACCATTCCTG 59 NA Mus musculus 50 ENSMUSG00000055855 ENSMUSG00000055855 ENSMUST00000069605 1 1 1 60 17 67366365 67366383 ATATGTCTGGAGAAAGGCA 57 67366401 67366425 CTGATAGGTATCTTACTGTATGTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Fto ENSMUSG00000055932 ENSMUST00000069718 2 1 1 80 8 93965693 93992222 TATTTCATGCTGGATGACCT 58 93992265 93992283 GTGAGTGGAACTAAACCGA 59 NA Mus musculus 50 EG433332 ENSMUSG00000056128 ENSMUST00000070048 3 1 1 60 1 92572035 92575480 CAAGAAGATCTGAAGCTGAC 58 92575502 92575521 AAGGCTTAGGAATTATCTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Nanos3 ENSMUSG00000056155 ENSMUST00000070102 3 1 1 128 8 86700065 86700083 TTCTGTCTACTGCTACACC 58 86697865 86699973 TTGGAACCTGCATAGACAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4933421E11Rik ENSMUSG00000056260 ENSMUST00000106737 2 1 5 62 3 106535499 106535519 GTTGAATACCAACAGTTCTGG 59 106536044 106536256 AGCTGTGATTCTTGGTCTC 59 NA DesignNoJunction Mus musculus 50 5730596B20Rik ENSMUSG00000056468 ENSMUST00000070587 3 1 1 60 6 52128975 52128995 GGACTACAGCTACAGAATTCC 59 52129016 52129035 TGGAGAGTTAAAGAACTGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 4931429L15Rik ENSMUSG00000056617 ENSMUST00000070831 3 1 1 110 9 46115037 46116849 TTTCCCATTCAGGTCACAC 59 46114945 46114963 CATGACTCCACACTAGGAC 59 NA Mus musculus 50 Dnahc9 ENSMUSG00000056752 ENSMUST00000080665,ENSMUST00000075581,ENSMUST00000017541 2 3 4 97 11 65806271 65806289 TGACATGAATATGCCCGAG 59 65804024 65806210 TGTTCCGATCATACCAGTG 59 NA Mus musculus 50 Aadat ENSMUSG00000057228 ENSMUST00000079472,ENSMUST00000098756 1 2 2 80 8 62997390 63005375 GAACCCTTTATGCTATGAAACC 59 63005416 63005434 GACCCTCTGGAATAATCCC 58 NA Mus musculus 50 Uxs1 ENSMUSG00000057363 ENSMUST00000076997 3 1 1 81 1 43821786 43821805 GAATGCACATGAATGATGGG 59 43817399 43821742 GAGCCATAGACTGTGAGTG 59 NA Mus musculus 50 Ryr3 ENSMUSG00000057378 ENSMUST00000080673,ENSMUST00000091818,ENSMUST00000099579 1 3 3 80 2 112750098 112750117 TGCTCAATTCTCCAATAACC 57 112748653 112750055 AAGACCTCCAAGATACCTG 57 NA Mus musculus 50 OTTMUSG00000011070 ENSMUSG00000058186 ENSMUST00000105738,ENSMUST00000077751 2 2 2 67 4 145286131 145289158 CTGCACAGTGTCTATTAACC 58 145289188 145289206 GAGACATTCCCATTCCTCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Phf21a ENSMUSG00000058318 ENSMUST00000111293,ENSMUST00000111292,ENSMUST00000111291 3 3 9 81 2 92054236 92055628 CTCCAGAATTGGACTTCTC 57 92055672 92055691 AATGCTGCATATCATATCCC 57 NA InUTR Mus musculus 50 Cds2 ENSMUSG00000058793 ENSMUST00000110158,ENSMUST00000103181,ENSMUST00000089461 2 3 3 135 2 132118992 132119010 CGAAGCAAAGCTAGATGGA 59 132119109 132120129 GTTCTTCCACCTTGAGGAC 59 NA Mus musculus 50 Zfp353 ENSMUSG00000058906 ENSMUST00000080541 1 1 1 60 8 43168139 43168157 CCGAAGACATTCCTTCCTC 59 43168097 43168115 TGTAGAAAGTCTCCCTGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 6030490I01Rik ENSMUSG00000059000 ENSMUST00000079404 1 1 1 62 17 32958027 32958723 GTAGTCAGTTGTTGGAGAG 57 32957983 32958001 TAAAGATTTCTGCACGCTG 58 NA DesignNoJunction Mus musculus 50 Hist2h3c2 ENSMUSG00000059309 ENSMUST00000075558 2 1 1 71 13 23636764 23636782 ATAGGCACGCTTTCTACAC 59 23636817 23636835 TTTGGTGGATAATGGAGGT 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Olfr105 ENSMUSG00000060137 ENSMUST00000113642,ENSMUST00000073218 2 2 2 60 17 37519692 37519713 ACCTAGCATGTCTAGATATCTG 58 37519733 37519752 AAGTTCTCTAGCATCTTTGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ap2a1 ENSMUSG00000060279 ENSMUST00000085399,ENSMUST00000107857 3 2 2 80 7 52171580 52171601 GACATTGACTTTGGACATATGG 59 52171393 52171539 GAACAGGTACCCTATCTGC 59 NA Mus musculus 50 Olfr1447 ENSMUSG00000060303 ENSMUST00000071484 1 1 1 60 19 12976045 12976064 CTGGTGGATTTCTGTTACTC 57 12976004 12976025 CTATTAGTAGCCCATTCATGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gm839 ENSMUSG00000060416 ENSMUST00000079186 3 1 1 271 6 89164928 89166049 AGAAGACAACACAGGATGG 59 89162548 89162566 AAATCCAGGGTCTGAAAGC 59 NA DesignNoJunction, InUTR Mus musculus 50 Cnih4 ENSMUSG00000062169 ENSMUST00000111059,ENSMUST00000075968 2 2 2 86 1 183083926 183086000 TTAAACAAGTGGGTGATCCC 59 183086049 183086067 AAGGAAGATGAACCAGTGC 59 NA Mus musculus 50 Olfr784 ENSMUSG00000062239 ENSMUST00000082342 2 1 1 60 10 128825087 128825106 ATCATGAACAGCAAAGTGTG 59 128825129 128825147 CAAAGAACCCAGTAACCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp398 ENSMUSG00000062519 ENSMUST00000079881 3 1 2 165 6 47790620 47790642 CCAGGTATTAAAGGAGATATCCC 59 47809047 47809429 TCATGGCATAATCCATGGAG 59 NA Mus musculus 50 Olfr493 ENSMUSG00000062710 ENSMUST00000080106 1 1 1 60 7 115490145 115490163 GGTACAGTTGAATGCTTCC 58 115490103 115490122 TACAGATTGCCATAAACCGA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr298 ENSMUSG00000062878 ENSMUST00000077800 3 1 1 60 7 93637642 93637661 CATGAGTAGTGGTAACTGTG 57 93637601 93637620 AAAGAGTACTCCAATAGCCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Kdr ENSMUSG00000062960 ENSMUST00000113516,ENSMUST00000076072 3 2 2 80 5 76348963 76352189 CATAATAGAAGGTGCCCAGG 59 76348902 76348921 CAGAAGAACATGGCAATCAC 59 NA Mus musculus 50 OTTMUSG00000008689 ENSMUSG00000063929 ENSMUST00000084342 2 1 1 282 4 115284231 115287224 CTTTACCCAAAGGTGTCCA 59 115294149 115294167 GACTTCAGCACAATTCGTG 59 NA DesignRelaxed Mus musculus 50 Brpf3 ENSMUSG00000063952 ENSMUST00000004985,ENSMUST00000038971 1 2 3 140 17 28965358 28965376 GAATGGAGACTCTGACCAC 59 28968352 28972720 TTGGGATCGATGATCAAGG 59 NA Mus musculus 50 Klk8 ENSMUSG00000064023 ENSMUST00000085461 1 1 1 81 7 51054632 51054650 ATCTGTGTCCCAAAGTTGG 59 51054692 51057465 GTGTTTGGAAAGTTCTCTTGAG 59 NA Mus musculus 50 A130090K04Rik ENSMUSG00000064065 ENSMUST00000086896,ENSMUST00000058132,ENSMUST00000105617,ENSMUST00000105618,ENSMUST00000078070 1 5 5 86 10 3409433 3411279 GGATGAAGAATGTTACAGTGAG 58 3411326 3411344 GAAGTTGTGGAAGCATACG 58 NA Mus musculus 50 Cd209b ENSMUSG00000065987 ENSMUST00000084086,ENSMUST00000111014,ENSMUST00000084085 2 3 3 80 8 3920053 3921351 GATGAAGAGCAGACCTTCC 59 3919991 3920009 CTCCTTCTTCAGGTCTGAC 58 NA Mus musculus 50 Olfr61 ENSMUSG00000066124 ENSMUST00000084456 2 1 1 60 7 147823662 147823682 CATGCTACTCTAAGACTTCTC 57 147823703 147823722 TTAGAGCGATTGTGTAGAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr857 ENSMUSG00000066903 ENSMUST00000086480 1 1 1 60 9 19612959 19612977 CTTTCATTGGCTGACATGG 59 19612999 19613019 GCAAGTTTATCAGCATCTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Krt77 ENSMUSG00000067594 ENSMUST00000087996 3 1 1 92 15 101691771 101693222 TGTACCAGACCAAGTACCA 59 101691697 101691715 GGTTGAGCTCTGAGATCTC 59 NA Mus musculus 50 Krt86 ENSMUSG00000067614 ENSMUST00000088049 2 1 1 60 15 101305170 101305844 ACAAGAAGAGGTACGAGGA 59 101305868 101305886 GCCACAAACTCATTCTCAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Olfr895 ENSMUSG00000070309 ENSMUST00000093864 2 1 1 61 9 38076984 38077003 TTACAGCCTCAGAAACAAGG 59 38077027 38077045 ATGTGAGTCTCTTCCAGGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Prok1 ENSMUSG00000070368 ENSMUST00000049852 3 1 1 233 3 107040106 107040125 GAACGAGATATCCAGTGTGG 59 107038493 107038511 GTTGGCATTCTTCAAGTCC 59 NA DesignNoJunction Mus musculus 50 Wfdc8 ENSMUSG00000070533 ENSMUST00000109339,ENSMUST00000094351,ENSMUST00000094350,ENSMUST00000109338 1 4 4 82 2 164425576 164428660 GTTTGTTGAGAAGAAAGGACAG 59 164425515 164425533 CCATGTCGTTCTTACAGGA 58 NA Mus musculus 50 1700039E15Rik ENSMUSG00000070568 ENSMUST00000085364 3 1 1 84 7 52542445 52542587 TGGTACAAGTGCTTGTCTG 59 52542635 52542653 AACAGGAATACCACGTAGC 59 NA Mus musculus 50 Psg25 ENSMUSG00000070798 ENSMUST00000094795 3 1 1 86 7 19114876 19114897 GGATATTACACTCTTCGTACCA 59 19111886 19114831 GAAAGTAGAGGAGTACACCTG 59 NA Mus musculus 50 Gltscr1 ENSMUSG00000070808 ENSMUST00000094821 2 1 1 80 7 16560478 16560497 GAATGTTCATTCAGGAGGAG 57 16558224 16560435 AAGACACGTACTCATCAGG 58 NA Mus musculus 50 A430090E18Rik ENSMUSG00000070868 ENSMUST00000038455 2 1 1 80 4 111908406 111926365 TTAGTACTGAGTTCAGAGCAG 58 111926407 111926425 GAGTTCAAGGATTCCACCT 58 NA Mus musculus 50 Ccl19 ENSMUSG00000071005 ENSMUST00000102957 2 1 1 140 4 42768714 42768732 TAATGAAGATGGCTGCAGG 59 42768287 42768393 CTGTTGCCTTTGTTCTTGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 EG245297 ENSMUSG00000071372 ENSMUST00000095808 3 1 1 83 12 18030906 18030924 ATTTGCTGAATCCTTCCCA 59 18030970 18068782 TTCCAGCACCTATAACAGTG 59 NA Mus musculus 50 Slfn2 ENSMUSG00000072620 ENSMUST00000038038 2 1 1 60 11 82878802 82878820 ACTAGACTTGAGGCAACTG 58 82878844 82882765 CCAGCTGAATGTCATTCCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dmrtc1b ENSMUSG00000073027 ENSMUST00000101324,ENSMUST00000113609 3 2 2 98 X 99908971 99910009 CATGGAACACAAGGTTCTG 58 99910071 99910089 CAGACTTCCAGTCAGTGAG 59 NA DesignRelaxed Mus musculus 50 MGI:1916215 ENSMUSG00000073082 ENSMUST00000101417 3 1 1 60 6 49213127 49213146 TCGCTTCTAAATGAATGTGG 58 49213086 49213105 CCCAACATCTAGCTGTTAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 H2-Q6 ENSMUSG00000073409 ENSMUST00000091611,ENSMUST00000116599 3 2 4 189 17 35565025 35565044 AGAATTACACATGCCATGTG 58 35565323 35565958 TCAGACACTGTTCTCTGTG 58 NA InUTR Mus musculus 50 Smok2a ENSMUSG00000073458 ENSMUST00000080647 2 1 1 104 17 13419871 13419889 AATGAGACATCTCACCTGG 58 13419957 13420403 TCTAGTGATCTTCTGTGCC 58 NA InUTR Mus musculus 50 4931408C20Rik ENSMUSG00000073722 ENSMUST00000097801 3 1 1 60 1 26740221 26740241 TAGATGACACATCCAAACTCC 59 26740181 26740200 TCCACTTTATCCTCTTGTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr561 ENSMUSG00000073966 ENSMUST00000098217 1 1 1 60 7 109923606 109923625 TTCATGTTCAGATACCAGGA 58 109923647 109923666 TGCAGTAGAGATGACAATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr547 ENSMUSG00000073979 ENSMUST00000098229 3 1 1 60 7 109683844 109683864 CCGAGTAAACATTTGGTATGG 59 109683885 109683904 CACAACATCTAAGACCACTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 A630001O12Rik ENSMUSG00000074025 ENSMUST00000098306 1 1 1 60 8 129375192 129375212 TCATAGAAGACCCAAATCTGG 59 129375234 129375252 GGTTGTAGATGCTTGTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Adh1 ENSMUSG00000074207 ENSMUST00000004232 3 1 1 82 3 137951782 137951800 CAGAACCTCTCCATGAACC 59 137951845 137952781 TCTTTACTCTTAAACCCGCC 59 NA Mus musculus 50 Pira7 ENSMUSG00000074417 ENSMUST00000108618,ENSMUST00000070639,ENSMUST00000108614 2 3 5 60 7 3849027 3849045 CAGGATGAATCATCAGGCT 59 3848837 3849003 TCCAGTAGTCTCCTGTCAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Tox2 ENSMUSG00000074607 ENSMUST00000109428,ENSMUST00000099110 2 2 3 184 2 163073561 163101715 CCAGCCAGACCTATAACAG 59 163101863 163101881 ATCCATTGCTTGGTACGAG 59 NA Mus musculus 50 OTTMUSG00000015750 ENSMUSG00000074736 ENSMUST00000109935,ENSMUST00000109934,ENSMUST00000109933 3 3 4 98 2 149725626 149725644 AATTCATCGACCTCTCAGG 58 149725706 149756653 TGGAGTAGTCACTCTCCAG 59 NA Mus musculus 50 Olfr1250 ENSMUSG00000075078 ENSMUST00000111527,ENSMUST00000099768 2 2 2 60 2 89497014 89497033 TGACACCTATTTCCTTGGAC 59 89496973 89496993 GACCACTATAGACATTGCTCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr73 ENSMUSG00000075140 ENSMUST00000099838 1 1 1 60 2 87874544 87874563 CCATCTGACAGCTATAACCA 58 87874503 87874527 GTTAGGTACACAGTATAGGAATAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1134 ENSMUSG00000075154 ENSMUST00000099854 2 1 1 60 2 87496979 87496998 CTCTTTGCATTGTTCTTCCT 58 87496938 87496957 TGACCATTCCTAGATTAGCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1066 ENSMUSG00000075181 ENSMUST00000099885 2 1 1 61 2 86295718 86295737 TACTGAGGGTAAATGGAAGG 58 86295676 86295694 AGACGATGACAACTGTCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1044 ENSMUSG00000075200 ENSMUST00000099906 3 1 1 60 2 86011782 86011802 ACCAATGTACTTCTTCCTCAG 59 86011742 86011760 AATGACAGACGAGTAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4833423E24Rik ENSMUSG00000075217 ENSMUST00000099923 2 1 1 88 2 85342247 85342266 AGCATGGCTAATACTACACC 59 85340461 85342196 AACATTGAGCCTGAGACAC 59 NA Mus musculus 50 NP_001020457.1 ENSMUSG00000075259 ENSMUST00000099978 3 1 2 96 10 31670931 31670950 ATAGTTCCCTCCAGATTGTC 58 31414210 31466316 ATGAAGTCAAAGCTGTCCT 58 NA Mus musculus 50 ENSMUSG00000075292 ENSMUSG00000075292 ENSMUST00000100029 1 1 1 60 10 22541772 22541790 TTTCCAAACCAACCTTCCT 59 22541814 22541832 GGGTCCTACTGAAACTGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000003947 ENSMUSG00000075410 ENSMUST00000106381,ENSMUST00000100197 2 2 3 93 11 116521068 116521087 CATCTAGGAAGATGGTGTGG 59 116529347 116529365 CAAATCCCTCTGAGGATGG 59 NA DesignNoJunction Mus musculus 50 ENSMUSG00000075496 ENSMUSG00000075496 ENSMUST00000100355 3 1 1 107 14 80263341 80268127 GAGAATGAACAACATCACCA 58 80263253 80263271 GTTGATCATCTGGAAGGCA 59 NA DesignNoJunction Mus musculus 50 mmu-mir-764 ENSMUSG00000076458 ENSMUST00000103259 3 1 1 90 X 143436809 143436828 AATCTGAATCTTGGAGGCAG 59 143436881 143436899 CAATCATGGTGACAGTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV13-84 ENSMUSG00000076538 ENSMUST00000103339 1 1 1 100 6 68889644 68889781 GGCATGATATGTGACATCC 58 68889845 68889863 TATATGTCCTCACTTGCCT 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV13-84 ENSMUSG00000076538 ENSMUST00000103339 3 1 1 60 6 68889619 68889637 GCTCTTACTGCTGTTTGGA 59 68889779 68889798 TGAAGATTGTGTCATCTGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV12-3 ENSMUSG00000076845 ENSMUST00000103657 1 1 1 128 14 54241632 54241650 GAGATGGAGACTCAGTGAC 58 54241742 54241760 TGAGATAGTGCACATACCA 57 NA DesignNoJunctionSingleExon Mus musculus 50 A2ASE4_MOUSE ENSMUSG00000078069 ENSMUST00000094978 1 1 1 60 4 88449599 88449617 TATCTGAAGGCAAAGGCAC 59 88449641 88449659 CTTGCAATTGGACTCTGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000070585 ENSMUSG00000078160 ENSMUST00000104964 1 1 1 112 4 146915228 146915246 ATTTGTTAGGAAAGGCAGG 57 146915322 146915340 CTTCTTCTGACCTCTCACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Chml ENSMUSG00000078185 ENSMUST00000104984 2 1 1 60 1 177618364 177618382 CTGCATGTTGACTCAAGGA 59 177618322 177618341 AACCTGTAAAGCTGAAACTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Mup1 ENSMUSG00000078687 ENSMUST00000095058 2 1 1 66 4 60233966 60233987 GGAATTATCTATGGTTGCTGAC 58 60233288 60233940 GAATCCATCATACGTCACAG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Ccl19 ENSMUSG00000078736 ENSMUST00000108008 3 1 1 140 4 42249822 42249840 TAATGAAGATGGCTGCAGG 59 42250161 42250267 CTGTTGCCTTTGTTCTTGG 59 NA Nonspecific Mus musculus 50 Zfp59 ENSMUSG00000078779 ENSMUST00000108332,ENSMUST00000108331 1 2 2 80 7 28631458 28631478 TTACTAGAGCAGGAGAAAGAG 58 28631519 28638419 ATAATCTGCCTCCAAATCTG 57 NA Nonspecific Mus musculus 50 Prkcc ENSMUSG00000078816 ENSMUST00000100301 2 1 1 80 7 3314020 3314038 CCGAAATGACTTCATGGGT 59 3314080 3314400 AGTAACTTGTACCATCCATCC 59 NA Mus musculus 50 A2BE20_MOUSE ENSMUSG00000078884 ENSMUST00000109001,ENSMUST00000109004,ENSMUST00000109002 3 3 4 80 2 176139456 176139476 GATGCTTCTCAGAAGAGTCTC 59 176139516 176139742 TTCCCAACTGTAACCTATAGC 59 NA Nonspecific Mus musculus 50 Slc35f4 ENSMUSG00000079246 ENSMUST00000037120 1 1 1 80 14 49923744 49923855 ACTATGGCTAGATCCAGAC 57 49923682 49923700 GAGATAATCACGCAAGAGC 58 NA InUTR Mus musculus 50 4933413G19Rik ENSMUSG00000079304 ENSMUST00000032506 3 1 2 123 6 128329982 128333778 CCAAACTTCAAGAAGCATACAG 59 128333860 128333880 AACCCTGTTGAATAGTAGCAG 59 NA InUTR Mus musculus 50 NP_001092780.1 ENSMUSG00000079517 ENSMUST00000114021 3 1 1 88 X 76578156 76578176 CTGGTATCATCTTGAAATCCG 58 76576253 76578106 CAATGCATGTTGTCTCCAG 59 NA Mus musculus 50 NP_001098021.1 ENSMUSG00000080312 ENSMUST00000116660 3 1 1 70 17 19517141 19517162 GATCAGCAGTTGTGTTTATCTG 59 19517193 19519480 ACAGACTGAGGGATCTCTG 59 NA DesignRelaxed Mus musculus 50 Fert2 ENSMUSG00000000127 ENSMUST00000000129 1 1 4 138 17 64256674 64256692 AATGAAGACACATGCAGAG 57 64256792 64260822 CTTTGTGACCTTGATCATCTC 58 NA Mus musculus 50 Wap ENSMUSG00000000381 ENSMUST00000000391 1 1 2 106 11 6536785 6536803 AAGATAGAATGCTCCAGCG 59 6533230 6536715 ATGATGGACCAAACCTCTG 59 NA Mus musculus 50 Ugp2 ENSMUSG00000001891 ENSMUST00000060895,ENSMUST00000102875,ENSMUST00000109575 1 3 3 80 11 21233804 21253361 AGAAGATTCGATTCAACCCT 58 21233743 21233761 ACCAACTTGTTCAACACAG 58 NA Mus musculus 50 Vwf ENSMUSG00000001930 ENSMUST00000112254,ENSMUST00000001995 1 2 5 80 6 125634140 125635835 CTGTGACACATGTGAGGAG 59 125635879 125635897 TGGGACTTACAATCTCCCA 59 NA Mus musculus 50 Nr1h3 ENSMUSG00000002108 ENSMUST00000111356,ENSMUST00000111354,ENSMUST00000111355,ENSMUST00000002177,ENSMUST00000111358 2 5 5 129 2 91032889 91033781 TTCTCCTGATTCTGCAACG 59 91032778 91032796 CCCTATCCCTAAAGCAACC 59 NA Mus musculus 50 Slc9a3r2 ENSMUSG00000002504 ENSMUST00000002572,ENSMUST00000019684 2 2 3 171 17 24777330 24777553 AGAAGGACAATGAGGATGG 58 24777177 24777196 CAGAAGTTGCTGAAGATCTC 58 NA Mus musculus 50 Puf60 ENSMUSG00000002524 ENSMUST00000100527,ENSMUST00000002599 3 2 2 100 15 75901248 75901266 AGAGATGTTGAGTGAGCAG 58 75901045 75901184 CCATCACTGTAGACTCCTG 58 NA Mus musculus 50 Cp ENSMUSG00000003617 ENSMUST00000108329,ENSMUST00000003714,ENSMUST00000108328 1 3 6 122 3 19889105 19889124 AAACCCTAGAAATGTTTCCC 57 19889206 19905475 GAGATGATACTTGTTCTACTGG 57 NA Mus musculus 50 Cacna1b ENSMUSG00000004113 ENSMUST00000093372,ENSMUST00000114447 3 2 7 103 2 24575475 24575493 TGAATGGGTACTTGGAGTG 58 24573629 24574569 TCTCTTCAACACTGCATCC 59 NA Mus musculus 50 Clcn3 ENSMUSG00000004319 ENSMUST00000093490,ENSMUST00000056508,ENSMUST00000110302,ENSMUST00000110301,ENSMUST00000004430,ENSMUST00000110300 3 6 6 82 8 63398344 63401595 TTGCAATAGAAAGTGCCAG 58 63398280 63398299 AAGAGATGGAGTATGCTGTG 59 NA Mus musculus 50 5730437N04Rik ENSMUSG00000004945 ENSMUST00000005053,ENSMUST00000024569 2 2 2 94 17 5433570 5439541 GTTCAATAAGGGCACTATGG 58 5433495 5433513 ACCAGGCATAAAGAGAACC 59 NA Mus musculus 50 Clint1 ENSMUSG00000006169 ENSMUST00000109261 1 1 4 87 11 45719898 45719917 TCCCAGAGCATGAATTTCTC 59 45719967 45721357 TAACATTCTGCAGAGGCTG 59 NA Mus musculus 50 C330007P06Rik ENSMUSG00000006423 ENSMUST00000006591 1 1 3 235 X 34392723 34393339 GAGGAGATAGAGGCTAGGG 59 34364044 34364062 TTACACAGAGGGATCACCA 59 NA DesignRelaxed Mus musculus 50 Brms1l ENSMUSG00000012076 ENSMUST00000059250,ENSMUST00000012220 3 2 2 80 12 56945448 56945467 CAGAGTATTTGGAACCACTG 58 56945507 56946288 AGAGTTCTCTATAGATTCCTGC 58 NA Mus musculus 50 Nanog ENSMUSG00000012396 ENSMUST00000112581,ENSMUST00000112580,ENSMUST00000012540,ENSMUST00000112582 2 4 4 80 6 122661751 122661769 AGAAGCAGAAGTACCTCAG 58 122661811 122662656 AGGTCTTAACCTGCTTATAGC 59 NA Mus musculus 50 Camta1 ENSMUSG00000014592 ENSMUST00000097774,ENSMUST00000049790 3 2 6 92 4 151204635 151209933 ACCTATAGAAGATGATCATGGG 58 151204564 151204582 CTTGAACATTTCGGCAGAC 59 NA Mus musculus 50 Arl5b ENSMUSG00000017418 ENSMUST00000017562,ENSMUST00000069870 2 2 2 84 2 14994760 14994780 CTTGTTGTGGATAGCATTGAC 59 14994826 14996598 TCCTTAAATCCTCATGGGC 59 NA Mus musculus 50 Lrp11 ENSMUSG00000019796 ENSMUST00000019931 1 1 1 77 10 7328384 7328402 ATCTCAAGTCCAAGAGTGG 58 7343433 7343451 CTAATGCCAGAGGTAGCAC 59 NA DesignNoJunction Mus musculus 50 Epb4.1l2 ENSMUSG00000019978 ENSMUST00000068469,ENSMUST00000020151,ENSMUST00000053095 2 3 8 82 10 25221426 25221636 GACGCTGTTAAGAGTTCAC 58 25221682 25221700 ATTACGCTTTCGTCTTTCC 58 NA Mus musculus 50 Med23 ENSMUSG00000019984 ENSMUST00000092646 1 1 2 80 10 24602391 24602410 GATATGTACTGGAGCAACCT 58 24602453 24603025 GAGCAATGTTCAAGGTCTG 58 NA Mus musculus 50 Rab1 ENSMUSG00000020149 ENSMUST00000109602 3 1 4 91 11 20115694 20124376 CTTAGGTTTGCAGAGTCCT 58 20124430 20124449 CCTACCAACAACTTGTTGAC 58 NA Nonspecific Mus musculus 50 Cobl ENSMUSG00000020173 ENSMUST00000109651,ENSMUST00000109650,ENSMUST00000093315 2 3 5 112 11 12149738 12149756 CAGTTTCTAGGTTCAGCAC 58 12138054 12149663 CAAGGGAACCTTTCTTAGTC 57 NA Mus musculus 50 Hmg20b ENSMUSG00000020232 ENSMUST00000105323,ENSMUST00000105324,ENSMUST00000020454 2 3 3 71 10 80810193 80810211 TTCACGGAAGAGTTTCTGG 59 80809761 80809779 CACGTTCATCTTTCTCAGG 58 NA DesignNoJunction Mus musculus 50 Ascc2 ENSMUSG00000020412 ENSMUST00000109930 2 1 3 164 11 4572492 4579264 CCTAGAAAGGAAGGAGGAG 58 4579477 4579495 TATGTGTCGTCATACTCGT 57 NA Mus musculus 50 Rnf135 ENSMUSG00000020707 ENSMUST00000017839,ENSMUST00000017833 3 2 2 60 11 80012497 80012515 GAGTGTGAGGTCTCTAGCT 59 80012539 80012557 GACTTAAGCCATACAGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mxra7 ENSMUSG00000020814 ENSMUST00000047715 1 1 3 90 11 116672163 116672181 GATTGAGCTGACCTCTGAC 59 116669272 116672110 ATTCTTCAGTTCACAAGGGT 59 NA InUTR Mus musculus 50 Ywhae ENSMUSG00000020849 ENSMUST00000067664,ENSMUST00000108422 2 2 2 89 11 75565504 75565522 AATCAGCAGCATTGAACAG 58 75565575 75569086 TCAGTTTCAACCATTTGCC 58 NA Mus musculus 50 Dlg4 ENSMUSG00000020886 ENSMUST00000108589 2 1 5 81 11 69830995 69831013 CACAGTGATCTCTTCCAGG 59 69831322 69840437 GGTAGCGGTATTTCTGACTC 59 NA Mus musculus 50 Usp43 ENSMUSG00000020905 ENSMUST00000021288,ENSMUST00000108676 2 2 3 95 11 67690026 67693308 GCATTACACAGCCTATTGC 59 67689949 67689967 GTGTTGACCTCATCCTCTC 59 NA Mus musculus 50 Pygl ENSMUSG00000021069 ENSMUST00000071250 1 1 2 114 12 71323897 71328331 CAAGAGGGTGTATTACCTCTC 59 71320646 71323822 CAATCCAAGCTGGTAAATGG 59 NA Mus musculus 50 Mta1 ENSMUSG00000021144 ENSMUST00000109727,ENSMUST00000109726,ENSMUST00000009099,ENSMUST00000069690 3 4 5 129 12 114371430 114371448 GAAGAGTTCATCCAGTGTG 57 114371541 114371762 CTTCATGTTGCCATCTACC 58 NA Mus musculus 50 1700020O03Rik ENSMUSG00000021254 ENSMUST00000071106,ENSMUST00000110212 3 2 2 86 12 87601626 87601645 AAGTAGAAAGGATGGACTCC 58 87601694 87602574 CATGGTATCCTCTTTGAGC 57 NA Mus musculus 50 Klc1 ENSMUSG00000021288 ENSMUST00000069328,ENSMUST00000084942,ENSMUST00000021717 3 3 4 81 12 113014146 113014165 CTCTGATTCTTCCAAAGAGC 58 113014209 113015042 ACTACTGTGCTGTATTCCT 57 NA Mus musculus 50 Prl8a8 ENSMUSG00000021346 ENSMUST00000018389,ENSMUST00000110350,ENSMUST00000018016 3 3 3 81 13 27600270 27600288 AGCCAAGGAGATTGAAGAG 58 27599222 27600227 CTTTGAGGTAGGATAGACCTC 58 NA Mus musculus 50 Erbb2ip ENSMUSG00000021709 ENSMUST00000022222 2 1 3 83 13 104618041 104618060 GATTCATGTCAGAAGAGCAG 58 104614919 104617995 CCACAGATGCTTTCATCAG 58 NA Mus musculus 50 Mapk8 ENSMUSG00000021936 ENSMUST00000111945,ENSMUST00000111944 3 2 4 87 14 34206186 34206205 TTATGATGACGCCTTATGTG 57 34203921 34206136 CATAAGTCCACGTTCTCCT 58 NA Mus musculus 50 Tsc22d1 ENSMUSG00000022010 ENSMUST00000088906,ENSMUST00000048371,ENSMUST00000110887,ENSMUST00000100376,ENSMUST00000022587 1 5 5 82 14 76905093 76906230 GAGCAAGCTATGGATCTGG 59 76906275 76906294 TCTTTGATCTGCTCCTTCAG 59 NA Nonspecific Mus musculus 50 Ppp3cc ENSMUSG00000022092 ENSMUST00000078434,ENSMUST00000022685 2 2 2 80 14 70656217 70656235 CATTGTTTCTGCTTCGAGG 59 70647515 70656173 ACTTGATCCGACATTCCTG 59 NA Mus musculus 50 Mbnl2 ENSMUSG00000022139 ENSMUST00000088418,ENSMUST00000088419 3 2 3 107 14 120788375 120794941 CCACAGTCATGACTCAGTC 59 120795696 120795715 CTTGTCTCTTTGGTAAGGGA 58 NA Mus musculus 50 Cep97 ENSMUSG00000022604 ENSMUST00000023270,ENSMUST00000096023 2 2 2 80 16 55911713 55911731 AAGAGATGAAGAACGTGTG 57 55905966 55911670 GCTTGTACAGATCTTACCTC 57 NA Mus musculus 50 Rabl2a ENSMUSG00000022621 ENSMUST00000058058 1 1 3 112 15 89414421 89414439 GCAGACATACAGATGACTC 57 89413848 89414346 TCCAACTTGAAGTTCTTCAC 57 NA Mus musculus 50 Nde1 ENSMUSG00000022678 ENSMUST00000023359,ENSMUST00000115795 3 2 3 93 16 14170577 14175395 CTGTGAAGGAGAAGTTTGAG 58 14175450 14175469 TCTTTAATGGCTTTCGTCTG 58 NA Mus musculus 50 Stxbp5l ENSMUSG00000022829 ENSMUST00000114782,ENSMUST00000114780,ENSMUST00000114790,ENSMUST00000023526,ENSMUST00000114778 3 5 10 83 16 37188700 37188722 CTATAGATCAAGTGACCTGTACC 59 37174433 37188657 TTCAGCTCTGTTAAGCCTG 59 NA Mus musculus 50 Senp2 ENSMUSG00000022855 ENSMUST00000023561 3 1 2 116 16 22011612 22014201 AAGGCCAAGATTAGATTGC 57 22014281 22014299 TTACAAGCAGAAGACACCA 58 NA Mus musculus 50 Usp25 ENSMUSG00000022867 ENSMUST00000023580,ENSMUST00000060704 3 2 2 101 16 77115316 77115644 AAATGGAAGCAAACCTCCA 59 77115709 77115727 AAGGTAACTTTGGTGGCTC 59 NA Mus musculus 50 Tmc1 ENSMUSG00000024749 ENSMUST00000025658 1 1 2 81 19 20864121 20864295 AGAAGATGAAACAGCAAGCT 59 20864059 20864077 AAACCACATCTCCAACCTG 59 NA Mus musculus 50 Ablim1 ENSMUSG00000025085 ENSMUST00000111559,ENSMUST00000111558,ENSMUST00000111555,ENSMUST00000079360,ENSMUST00000111546,ENSMUST00000111541 2 6 15 93 19 57123991 57125629 CATGTTCCAGATCAAGGGA 58 57121520 57121538 TATCTTCTGAAGCCTTGCT 58 NA Mus musculus 50 Aspscr1 ENSMUSG00000025142 ENSMUST00000106160 1 1 5 180 11 120535115 120535372 AGTACTAGAAGACACATGCC 58 120538929 120539742 GATGCGAACTATGTTCTCAG 58 NA Mus musculus 50 Csnk1d ENSMUSG00000025162 ENSMUST00000070575,ENSMUST00000106124 3 2 4 112 11 120829392 120829410 GAACGGAAAGTGAGTATGC 58 120826314 120829316 GGAATGCTATTCTGTGAGG 57 NA Mus musculus 50 Ptprj ENSMUSG00000025314 ENSMUST00000111495 1 1 3 94 2 90276669 90276687 TATCAGAGCCCAGAAAGAC 58 90270490 90276611 CATTCAAGGAACTTGGCTC 58 NA Mus musculus 50 Itga7 ENSMUSG00000025348 ENSMUST00000099112,ENSMUST00000076079 1 2 5 150 10 128377975 128378878 GGAACCTATAACTGGAAGGG 59 128378989 128379875 CGATGGAGAAACCTAAATAGC 58 NA Mus musculus 50 Cd151 ENSMUSG00000025510 ENSMUST00000106000,ENSMUST00000058746 3 2 2 80 7 148655547 148655845 GTTACGCTTGTACTTCATCC 58 148655886 148655906 TGATAATAGACATAGGCCAGG 58 NA Mus musculus 50 Crisp4 ENSMUSG00000025774 ENSMUST00000026876,ENSMUST00000115340,ENSMUST00000115344,ENSMUST00000115339 1 4 4 80 1 18120325 18124132 CATGCTGAAAGTGAGTTGG 59 18120263 18120281 TCACTGTCTGACTTGTCAC 59 NA Mus musculus 50 Pard3 ENSMUSG00000025812 ENSMUST00000026921,ENSMUST00000079777,ENSMUST00000108752 3 3 3 80 8 129895707 129895725 TTAGTACCAACGTAGGCAG 58 129895766 129900652 CTTCTGTACCTTTCTTAAGCTG 58 NA Mus musculus 50 Uimc1 ENSMUSG00000025878 ENSMUST00000099496 2 1 3 81 13 55171161 55178774 AAAGCCTGAATTCTTCCCA 59 55171098 55171116 ACAGAGTTGTCTCCTTCAG 58 NA Mus musculus 50 Nif3l1 ENSMUSG00000026036 ENSMUST00000064224 3 1 2 141 1 58512544 58512562 ATCTTCGCTTAGCTCTTGG 59 58537833 58537852 TCCTGTTTCCAAGAGACAC 59 NA Mus musculus 50 Chrng ENSMUSG00000026253 ENSMUST00000113243 2 1 2 86 1 89103325 89104791 TGGAGAACAAATCCCAGAC 59 89104841 89104859 TGAAGATCCACTCAATGGC 59 NA Mus musculus 50 Wdr64 ENSMUSG00000026523 ENSMUST00000027805 1 1 3 80 1 177702466 177705712 TCAAGATTATCCAGGGAAAGG 59 177705754 177705772 ATTGTAGGTAAGGCATGGC 59 NA Nonspecific Mus musculus 50 Angel2 ENSMUSG00000026634 ENSMUST00000027947,ENSMUST00000066632,ENSMUST00000110899 3 3 3 83 1 192763028 192764764 ATCACTGGGTTATCATTGTG 57 192764810 192764828 AACCTGGAATGTTTGAAGC 58 NA Mus musculus 50 Pfkfb3 ENSMUSG00000026773 ENSMUST00000114846,ENSMUST00000114845,ENSMUST00000028114,ENSMUST00000100411,ENSMUST00000049849 2 5 7 129 2 11403716 11403734 CATACCTGAAATGTCCGCT 59 11401988 11403505 TTCTTTGCATCCTCTGACC 59 NA Mus musculus 50 Stom ENSMUSG00000026880 ENSMUST00000028241,ENSMUST00000091013,ENSMUST00000070938 2 3 3 294 2 35192379 35192397 ATCCCTGAGTCCTTCAGAG 59 35177191 35179186 AGTCCTTAGTGAGGACCTC 59 NA DesignRelaxed Mus musculus 50 Agpat2 ENSMUSG00000026922 ENSMUST00000028286,ENSMUST00000102901 2 2 2 82 2 26452779 26452797 CGGACAGAAGAAACTGGAG 59 26451978 26452733 CCATGAGACCCATCATGTC 59 NA Mus musculus 50 Lcn5 ENSMUSG00000026937 ENSMUST00000100313,ENSMUST00000028306,ENSMUST00000100312 1 3 3 80 2 25515642 25516160 TCACCAGAATATCAGGAGAG 57 25516201 25516221 GAGAGGTGATATCAATCACAG 57 NA Mus musculus 50 Mtx2 ENSMUSG00000027099 ENSMUST00000111974,ENSMUST00000028511 2 2 2 80 2 74706444 74706462 TCAACAATATGCTGCTGAC 58 74706975 74707376 ACCTAGCAATAGTGATCTCC 58 NA Mus musculus 50 Mdk ENSMUSG00000027239 ENSMUST00000111309,ENSMUST00000028672,ENSMUST00000069423,ENSMUST00000090602 1 4 5 162 2 91771107 91771125 TACAAGTTTGAGAGCTGGG 59 91770261 91770981 TTCCTTTCTTGGCTTTGGT 59 NA Nonspecific Mus musculus 50 Mtap1a ENSMUSG00000027254 ENSMUST00000094639,ENSMUST00000110639 3 2 2 167 2 121133460 121133674 GAGAACCTTCAGGTGACTC 59 121133804 121133823 TCAGAACTCAATCTTGCAGG 59 NA Mus musculus 50 Spint1 ENSMUSG00000027315 ENSMUST00000028783,ENSMUST00000110816,ENSMUST00000110817 3 3 3 80 2 119072372 119073753 TCAGTGACAAAGGGTACTG 58 119073797 119073815 ATGGGTTGTAATACCAGCG 59 NA Mus musculus 50 Adra1d ENSMUSG00000027335 ENSMUST00000103184,ENSMUST00000028810 2 2 2 61 2 131387145 131387163 TATGCGATCTTCTCTTCCG 58 131387102 131387120 TACATGACCACGATCACTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gabpb1 ENSMUSG00000027361 ENSMUST00000110424,ENSMUST00000028839,ENSMUST00000103228,ENSMUST00000089741,ENSMUST00000103226 2 5 10 80 2 126472480 126475819 TCTTCAGAAACTCCAGTAGTG 59 126472420 126472440 GCTAACTACTTGCTGAATTGC 59 NA Mus musculus 50 Usp8 ENSMUSG00000027363 ENSMUST00000110416 1 1 2 83 2 126543826 126543845 ACTCTACCTCAGTTCTTCAC 58 126543891 126545736 AACTTGGTATTCTTGGTGC 57 NA Mus musculus 50 Dnmt3b ENSMUSG00000027478 ENSMUST00000072997,ENSMUST00000109772,ENSMUST00000056495,ENSMUST00000109774,ENSMUST00000088976,ENSMUST00000109771 1 6 10 149 2 153496176 153496597 GCAACCAGTGGTTAATAAGTC 59 153498014 153498033 TAGCTATTTGTCTTGAGGCG 59 NA Mus musculus 50 Gnas ENSMUSG00000027523 ENSMUST00000087876 3 1 14 125 2 174125675 174125695 GGAGAAGATGGACTACATGTG 59 174159773 174167159 TTCTCACTATCTCCGTTAAACC 59 NA Mus musculus 50 Snx16 ENSMUSG00000027534 ENSMUST00000067626 2 1 3 95 3 10420865 10437818 AATTCACTGCTTTCTGTGAG 58 10420789 10420807 GTTTCTTCAGGGATTCCAC 58 NA Mus musculus 50 Ngfb ENSMUSG00000027859 ENSMUST00000106925,ENSMUST00000035952 3 2 2 182 3 102313716 102313734 AGTGAAATTAGGCTCCCTG 58 102317998 102324047 ATTACGCTATGCACCTCAC 59 NA Mus musculus 50 Mrpl9 ENSMUSG00000028140 ENSMUST00000098876 1 1 2 106 3 94251253 94254079 GTGTGATGTGACTACTAGGG 59 94254146 94254166 ACAGGATCAAGATCTTCTTCC 59 NA Mus musculus 50 Cpne3 ENSMUSG00000028228 ENSMUST00000029885 3 1 2 81 4 19463725 19463743 ATCGCATGATCTCATTGGA 58 19462434 19463681 TTCATATTCAACAGGTGAGC 57 NA Mus musculus 50 Ube2j1 ENSMUSG00000028277 ENSMUST00000029944,ENSMUST00000108163 2 2 2 82 4 33125232 33125250 GAGGAGTTTACCATGGACG 59 33125296 33127716 TCCATTAGCTGTTAGCAGG 59 NA Mus musculus 50 4930417M19Rik ENSMUSG00000028457 ENSMUST00000107942,ENSMUST00000107937,ENSMUST00000107940 1 3 5 80 4 43378896 43378916 CTTTCAAATCACTTGACGAGG 59 43378958 43379483 CTTCTAGAGCATAGGCCAG 58 NA Mus musculus 50 Pde4b ENSMUSG00000028525 ENSMUST00000106911,ENSMUST00000030251,ENSMUST00000106908,ENSMUST00000106904 1 4 9 107 4 102170382 102170400 AAGAAACAACTTCACCCTG 57 102178639 102243380 TATGATTCTTCTTGCAGGC 57 NA Mus musculus 50 Slc6a9 ENSMUSG00000028542 ENSMUST00000063857,ENSMUST00000030269 2 2 3 95 4 117515729 117528486 AAAGGGATGTTGAATGGTG 57 117528545 117528563 CAGTACAAACTCGATCTGG 57 NA Mus musculus 50 Fusip1 ENSMUSG00000028676 ENSMUST00000102544 3 1 4 88 4 135419110 135419452 CCTAGAAATAGACCGACTGG 58 135423052 135423070 CTGTACTGGGTATTCCAGC 59 NA Mus musculus 50 Sfrs4 ENSMUSG00000028911 ENSMUST00000030743 1 1 2 158 4 131442217 131447137 AAGGTATGGCTTTGTGGAG 59 131447259 131448008 TAACCATATCCACTGCGTC 59 NA Mus musculus 50 Park7 ENSMUSG00000028964 ENSMUST00000105675,ENSMUST00000030805,ENSMUST00000105674,ENSMUST00000105676,ENSMUST00000105673,ENSMUST00000105677 3 6 6 99 4 150271571 150275125 TGAATGGCAGTCACTACAG 59 150271490 150271508 GCTAGTGCAAACTCAAAGC 59 NA Mus musculus 50 Ttll10 ENSMUSG00000029074 ENSMUST00000051509,ENSMUST00000105577,ENSMUST00000097731,ENSMUST00000030951 2 4 4 81 4 155421308 155421470 CGGAGCATCAATAATCAGC 58 155421245 155421263 TAGCTTGTAGTCCTCACAG 57 NA Mus musculus 50 Sgcb ENSMUSG00000029156 ENSMUST00000081170,ENSMUST00000087175 1 2 2 80 5 74031968 74031986 TTTATAAGAGCACGGTGGG 59 74031204 74031924 CTTGCTGGAAGACAATTGG 59 NA Mus musculus 50 Tbc1d14 ENSMUSG00000029192 ENSMUST00000101273,ENSMUST00000031094 1 2 3 80 5 36850348 36851019 ATGTGGGTTATGTTCAGGG 59 36850286 36850304 AAGCAATAAAGGCATCTGC 58 NA Mus musculus 50 Tec ENSMUSG00000029217 ENSMUST00000071944,ENSMUST00000113594,ENSMUST00000113593 2 3 4 95 5 73170716 73173252 GATAAGTATGGGAGTGAAGGA 58 73165106 73165124 GGTATTTCTGCAGTACCAC 57 NA Mus musculus 50 Plac8 ENSMUSG00000029322 ENSMUST00000097437,ENSMUST00000112910,ENSMUST00000031264 2 3 3 81 5 100988823 100988841 TGAATGAGTGTTGTCTGTG 57 100985604 100988779 CAAATAGATCCAGGAATGCC 58 NA Mus musculus 50 4930522N08Rik ENSMUSG00000029331 ENSMUST00000031274 3 1 1 60 5 100112450 100112469 TCTCTGGTTTCAATGTTCTG 57 100112491 100112510 TCGATATGGTCGTAATCGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Mapkapk5 ENSMUSG00000029454 ENSMUST00000111787 1 1 5 111 5 121978898 121978916 ATAATGTGCTACCCTCTGC 59 121975764 121977175 TCTTCATTCTGGTCCTGGA 59 NA Mus musculus 50 5730507A09Rik ENSMUSG00000030518 ENSMUST00000107504,ENSMUST00000032731 2 2 2 109 7 71920663 71920683 GTATGATGTTGCCATCAACAG 59 71912598 71920592 GATCAACACTTGCAACCTG 59 NA InUTR Mus musculus 50 Sez6l2 ENSMUSG00000030683 ENSMUST00000106335,ENSMUST00000032921,ENSMUST00000106333,ENSMUST00000106332 3 4 4 104 7 134101873 134101891 ACTGTGACTCAGGATACCA 59 134101959 134102569 CACAAGATGCTGTACAGCT 59 NA Mus musculus 50 Lrch2 ENSMUSG00000031290 ENSMUST00000112819,ENSMUST00000033647 3 2 3 85 X 143922779 143922797 AGTGGCAATGAGAATGAGG 59 143916202 143919301 GAGCGGTCATATTCCTCAG 59 NA Mus musculus 50 Jak3 ENSMUSG00000031805 ENSMUST00000051995,ENSMUST00000110013,ENSMUST00000110012 3 3 3 80 8 74204625 74204644 TTATTTCTGCAAGGAGGTGG 59 74204687 74204790 AAGTCTAACGTGATGGGTC 58 NA Nonspecific Mus musculus 50 Kars ENSMUSG00000031948 ENSMUST00000093120 1 1 2 171 8 114529676 114532112 AAGAAGTGAGCTGAAGAGG 58 114527332 114529543 GTAGTATTGATTTGGGTCCAG 58 NA Mus musculus 50 Acsl3 ENSMUSG00000032883 ENSMUST00000113521,ENSMUST00000035779,ENSMUST00000012393 3 3 3 85 1 78698020 78700064 TGTCTGAAGATCATTGACCG 59 78700112 78700130 AAAGCTGCCTCTACTTTCC 59 NA Mus musculus 50 Nfatc1 ENSMUSG00000033016 ENSMUST00000078049,ENSMUST00000035800 2 2 2 118 18 80879047 80894301 TATATGAGCCCATCCTTGC 58 80878947 80878965 CCTTCCGTCTCATAGTGAG 58 NA Mus musculus 50 St18 ENSMUSG00000033740 ENSMUST00000115503,ENSMUST00000115501,ENSMUST00000043578,ENSMUST00000115499,ENSMUST00000115497 3 5 5 82 1 6785650 6792412 CACTGCAGATGAAATCATGG 59 6792456 6792475 GGTCTTTCTTCTGGAGTGAG 59 NA Mus musculus 50 Exoc6b ENSMUSG00000033769 ENSMUST00000046334,ENSMUST00000051531 2 2 4 97 6 84810708 84840524 TATATTCTGTCCTGGGTGC 58 84810629 84810647 CATATTAGACGGAGGCTGG 59 NA Mus musculus 50 Tpsb2 ENSMUSG00000033825 ENSMUST00000115129,ENSMUST00000069616 2 2 2 115 17 25504246 25504397 TGATAATGACGAGCCTCTC 58 25504476 25504494 AATCATCTCCCGTGTAGAG 58 NA Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111696,ENSMUST00000111695,ENSMUST00000111694,ENSMUST00000111678,ENSMUST00000111677,ENSMUST00000111676,ENSMUST00000111687,ENSMUST00000111685,ENSMUST00000111684,ENSMUST00000111672 2 10 23 71 2 84443385 84443403 AAGAGTTGGATGTGTTGGT 59 84443048 84443350 GCTAAATCTTCTGCATGGG 58 NA DesignRelaxed Mus musculus 50 Ctnnd1 ENSMUSG00000034101 ENSMUST00000111670 2 1 23 152 2 84449221 84449695 CAAATCAGGGAATCGTTCAG 58 84449088 84449107 GTCAAAGTTTCCGTCAAGAG 59 NA Mus musculus 50 Bzrap1 ENSMUSG00000034156 ENSMUST00000039627,ENSMUST00000100644,ENSMUST00000107939,ENSMUST00000107936,ENSMUST00000039599,ENSMUST00000107932 3 6 6 81 11 87593007 87593025 CCTGTATCAATGTCACCGA 59 87593070 87593714 CTCCAAACACCTTGAGGAG 59 NA Mus musculus 50 Bmp2k ENSMUSG00000034663 ENSMUST00000035635 1 1 2 80 5 97503750 97515768 ATTTCTCACTCAGGTTCTCC 59 97515811 97515829 TTTGGTAAGGTTTGCAGTG 58 NA Mus musculus 50 Ccdc11 ENSMUSG00000035394 ENSMUST00000114895,ENSMUST00000039077 1 2 2 80 18 74458983 74459804 AGAGACGCAATAAGCTACG 59 74459847 74459866 TGGTTTCTCCTTTCAATTGC 58 NA Mus musculus 50 Lrfn5 ENSMUSG00000035653 ENSMUST00000047317 3 1 2 106 12 62944958 62944978 CTCCTGATTCTGTTACAGAGG 59 62952013 62953149 GGAAAGCTTCTGTGTTTCC 58 NA Mus musculus 50 BC005764 ENSMUSG00000035835 ENSMUST00000046458 3 1 2 100 10 79325217 79328542 CAGCTTATCGGATCTTCAC 57 79324497 79324515 TTTCTTTGCCAACTGACTG 58 NA Mus musculus 50 AW124722 ENSMUSG00000035944 ENSMUST00000045658,ENSMUST00000109414,ENSMUST00000088960 3 3 3 80 15 85674932 85674950 CGTACATGAAATGAGAGCC 58 85674993 85676771 ATATCAGAGTCCTTCCAGTG 58 NA Mus musculus 50 B230312A22Rik ENSMUSG00000036002 ENSMUST00000107957,ENSMUST00000107956,ENSMUST00000107959,ENSMUST00000107958,ENSMUST00000036462 1 5 5 147 4 43048767 43048785 CTTGCTGCCAATAGTTCTG 58 43047626 43047822 GAAGGGAGCTTAGCTTCAG 59 NA Mus musculus 50 Vezt ENSMUSG00000036099 ENSMUST00000047711 2 1 2 82 10 93436777 93437197 AGGAGCAGGAATTAGAAGC 59 93436713 93436734 CTGAGACAAGTGATAGAAATCG 58 NA Mus musculus 50 Unc84a ENSMUSG00000036817 ENSMUST00000110884 1 1 5 239 5 139706761 139706779 AGAACTTTCCAGAGTGGAC 58 139709945 139710483 ATATTTCGAAGGCACCTGG 59 NA DesignRelaxed Mus musculus 50 Ehmt1 ENSMUSG00000036893 ENSMUST00000046227 2 1 5 183 2 24708194 24708213 AATTCTGTCTTCCCAGACAG 59 24695268 24703474 GAAGTTACCTTCGTGATCCA 59 NA Mus musculus 50 Piwil4 ENSMUSG00000036912 ENSMUST00000115644 2 1 4 80 9 14531961 14533097 CTCAGTACAAATTGTCCCTG 58 14531900 14531918 CGTCAGCATTGAATAGGAG 57 NA Mus musculus 50 Pml ENSMUSG00000036986 ENSMUST00000085673,ENSMUST00000114136,ENSMUST00000041209 3 3 3 93 9 58082732 58094791 CGCTGACTGACATCTACTG 59 58082657 58082675 ATATCGCAATGGAGATGGC 59 NA Mus musculus 50 Dlg7 ENSMUSG00000037544 ENSMUST00000111778 2 1 2 148 14 48015545 48015563 GAATGCAATGAAAGGCAGG 59 48015414 48015434 CAGCAAAGCTACAAACTGAG 59 NA Mus musculus 50 Rps6kc1 ENSMUSG00000037581 ENSMUST00000056178,ENSMUST00000061611,ENSMUST00000097440 2 3 4 82 1 192695822 192709222 GGTACTGAAGGATTCTCCA 57 192695758 192695776 ATTCCATCATCTACCTCGG 58 NA Mus musculus 50 Nr0b2 ENSMUSG00000037583 ENSMUST00000042706 1 1 1 60 4 133112064 133112082 CACCCTTCTGGTAGATCTC 58 133112106 133112124 GAGTTCAGTGATGTCAACG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp365 ENSMUSG00000037855 ENSMUST00000064656 3 1 2 140 10 67372062 67372080 GACTCAGAAGAAGCAGGAG 59 67360354 67371958 ACGACTTCTTCCTCTTTCC 58 NA Mus musculus 50 Hoxa13 ENSMUSG00000038203 ENSMUST00000047993,ENSMUST00000114416 3 2 2 188 6 52209954 52209972 TCCCATGGAAAGCTATCAG 58 52209069 52209088 AACTGCACCTTAGTGTAAGG 59 NA DesignNoJunction Mus musculus 50 Rbbp7 ENSMUSG00000038344 ENSMUST00000041370,ENSMUST00000112316,ENSMUST00000112314,ENSMUST00000112315 3 4 4 206 X 159235739 159245433 AGAAATATGCTGATCTCCTGG 59 159228720 159228738 CCTGCTGCATATTCTCCTC 59 NA DesignRelaxed Mus musculus 50 Pigu ENSMUSG00000038383 ENSMUST00000099167 3 1 2 80 2 155118474 155118492 GATTTATGCAGGAAGTGCC 58 155073321 155118432 GTATTCTTGTACATCTGCCCA 59 NA Mus musculus 50 Akap2 ENSMUSG00000038729 ENSMUST00000098065,ENSMUST00000107600,ENSMUST00000071723,ENSMUST00000107599,ENSMUST00000098064,ENSMUST00000107598 1 6 14 86 4 57896065 57905750 TGATAGTAGTGTCCTGGAGG 59 57905799 57905817 TGGTTAGCGTAAATCCCTG 59 NA Mus musculus 50 A230083H22Rik ENSMUSG00000039126 ENSMUST00000044176 2 1 3 80 19 17282748 17282767 TGTGACTAGCTTATCTGAGC 58 17282809 17286790 TCATCCAGTTTGATGATGCT 59 NA Mus musculus 50 Runx2 ENSMUSG00000039153 ENSMUST00000113572,ENSMUST00000077846,ENSMUST00000113568 2 3 5 102 17 44795542 44795561 AGTATGAGAGTAGGTGTCCC 59 44776767 44795477 GCCTGGGATCTGTAATCTG 59 NA Mus musculus 50 Runx2 ENSMUSG00000039153 ENSMUST00000113572,ENSMUST00000077846,ENSMUST00000113568 3 3 5 103 17 44795543 44795562 CAGTATGAGAGTAGGTGTCC 58 44776767 44795477 GCCTGGGATCTGTAATCTG 59 NA Mus musculus 50 Smarcal1 ENSMUSG00000039354 ENSMUST00000047615 2 1 2 82 1 72674706 72674724 GCATTGGACAGACAAACTC 59 72674770 72675961 TTGAATCAGAGGCCAAAGG 59 NA Mus musculus 50 Uhrf1bp1 ENSMUSG00000039512 ENSMUST00000114849,ENSMUST00000088043 3 2 3 86 17 28031678 28031697 CTTTCTTGGAGGATGAGGAG 59 28031745 28032224 GGATGTCATCCTTGAGAGTG 59 NA Mus musculus 50 Cited2 ENSMUSG00000039910 ENSMUST00000038107,ENSMUST00000105529 1 2 2 60 10 17444401 17444420 TAGACACTGATTTCATCGAC 57 17444442 17444461 TCCAAACCCATTTCTATCAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Timeless ENSMUSG00000039994 ENSMUST00000105244,ENSMUST00000055539,ENSMUST00000105245,ENSMUST00000105241 1 4 8 94 10 127687157 127687349 TTCTTGCATGCAGAATGGA 59 127687407 127687425 CTTCACTTTCGTCCTCTGG 59 NA Mus musculus 50 Gbp5 ENSMUSG00000040264 ENSMUST00000090127 2 1 3 80 3 142170997 142171015 AATAGCATTGGAGAAGGCA 58 142171058 142184020 ATTCTATCAGCCTCTTCCTG 58 NA Mus musculus 50 Myd116 ENSMUSG00000040435 ENSMUST00000042105,ENSMUST00000098456 3 2 2 86 7 52779155 52779173 GGCTCAGATTGTTCAAAGC 59 52778671 52778689 TGACTTTCTCAGCGAAGTG 59 NA DesignNoJunction Mus musculus 50 Adam22 ENSMUSG00000040537 ENSMUST00000088761,ENSMUST00000088746,ENSMUST00000088745,ENSMUST00000046838 1 4 13 174 5 8092819 8095081 TAAGAAGAGGTCAAATGGACTC 59 8092342 8092361 AGTTGAGTTAGATCGAGGTC 58 NA Mus musculus 50 Col16a1 ENSMUSG00000040690 ENSMUST00000097867,ENSMUST00000044565,ENSMUST00000106002,ENSMUST00000106001 3 4 5 89 4 129730144 129730162 AGTGCTTCTGAAGAAACAC 57 129730215 129730511 ACTTCCAAGGAGATCTGTG 58 NA Mus musculus 50 Ttc3 ENSMUSG00000040785 ENSMUST00000064541 2 1 4 149 16 94613641 94613662 TGAGAGGAAATGAAGAGTTCTC 59 94614771 94615952 GAGAATGTATTCTAAACTGCCC 58 NA Mus musculus 50 Rshl1 ENSMUSG00000040866 ENSMUST00000035521,ENSMUST00000076887 1 2 2 95 7 19653492 19659396 CACTGGCAAGAAGTTTGAG 58 19659455 19659473 TCTTGCTGAATCAGAGCTG 59 NA Mus musculus 50 Rfx3 ENSMUSG00000040929 ENSMUST00000046898,ENSMUST00000099533,ENSMUST00000112613 1 3 3 80 19 27900639 27905115 GAGATTAGGCACTAGAGGA 57 27900577 27900595 TGTAGACGGTTAAGAGGAG 57 NA Mus musculus 50 Phf8 ENSMUSG00000041229 ENSMUST00000112666,ENSMUST00000112670,ENSMUST00000046950,ENSMUST00000046962,ENSMUST00000112668,ENSMUST00000112662 3 6 6 80 X 148000599 148002203 ATCTTTCGAGGCTTACGAG 59 148002247 148002265 AAATGCCAAGTTCAGAGCT 59 NA Mus musculus 50 Katnal1 ENSMUSG00000041298 ENSMUST00000110509,ENSMUST00000047257 1 2 2 266 5 149700581 149703214 CAGATGGATGGAGTTGGAG 59 149690439 149690457 GATGTTAGTGATGTCGGCA 59 NA DesignRelaxed Mus musculus 50 Rims1 ENSMUSG00000041670 ENSMUST00000097808 1 1 7 124 1 22603415 22637260 ACAGAAACTGGAGATTGCA 59 22603309 22603327 ATGACAGATTCCACACGTC 59 NA Mus musculus 50 Tnfrsf14 ENSMUSG00000042333 ENSMUST00000045919 2 1 2 97 4 154299522 154300720 GTCTGTGATCCAGACATGG 59 154299443 154299461 TGGTTCTCACAGAAGTAGC 58 NA Mus musculus 50 Sh2b3 ENSMUSG00000042594 ENSMUST00000086310,ENSMUST00000040308 3 2 2 139 5 122269034 122269128 CTTTGTGTTGAAGGTGCAG 59 122268829 122268847 AGGAAAGAGGTAACTCGGT 59 NA Mus musculus 50 Smg7 ENSMUSG00000042772 ENSMUST00000111836,ENSMUST00000043560 1 2 3 119 1 154688717 154690371 CGAAGCCTCTTTAAATCCT 57 154688288 154688306 GAACATACTGCTGTTTGGA 57 NA Mus musculus 50 Trim72 ENSMUSG00000042828 ENSMUST00000106248,ENSMUST00000081042 3 2 2 84 7 135151523 135151976 TTCCTCATGAAATTCTGCCT 59 135152620 135152638 GCTGGATATCTAGCCTTGC 59 NA Mus musculus 50 AU042671 ENSMUSG00000043679 ENSMUST00000055859 3 1 2 102 5 121775213 121775232 AGTTGTAGAGATGCAGTGTG 59 121775297 121778105 GATCTCTTTGGGCTGTCTC 59 NA Mus musculus 50 E330026B02Rik ENSMUSG00000043719 ENSMUST00000098441 2 1 2 80 9 105665139 105665158 AGGATTTGAATACAGGACAC 57 105663836 105665096 GCAACATTGATTAGTTGCC 57 NA Mus musculus 50 Lingo2 ENSMUSG00000045083 ENSMUST00000108124,ENSMUST00000108122 3 2 4 111 4 36003756 36003777 GAGTTATCATGATCAACCACTC 58 35837208 36003685 TTCATTTACCTGGTTTGCTC 58 NA InUTR Mus musculus 50 Bdh1 ENSMUSG00000046598 ENSMUST00000089759,ENSMUST00000115227,ENSMUST00000115226 3 3 3 86 16 31450040 31455120 ATCCTGAGAAGGGAATGTG 58 31455169 31455188 TATATGTCTCCATGCTGGTG 58 NA Mus musculus 50 Olfr686 ENSMUSG00000048425 ENSMUST00000050157 3 1 1 60 7 112352798 112352816 TTCTTCTTGACTGGCATCC 59 112352756 112352774 AGAAGGGAAGGGATATCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 3100002J23Rik ENSMUSG00000049154 ENSMUST00000094156 3 1 2 159 11 58610150 58612145 AGAAGATGCCAAGTTCCTG 59 58606454 58606474 GTAGACTCTGAAGTGGTTCAG 59 NA Mus musculus 50 Casr ENSMUSG00000051980 ENSMUST00000063597,ENSMUST00000114847 1 2 2 98 16 36515835 36517695 TGCATCAGGTATAACTTCCG 59 36515756 36515774 AGTCATGTTGGGAAGAAGG 59 NA Mus musculus 50 Pbx1 ENSMUSG00000052534 ENSMUST00000097471 1 1 3 108 1 170094759 170094777 TCTCTGTATCAACAGTGCG 59 170088874 170088892 TATCAGAGTGAACACTGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 1200016B10Rik ENSMUSG00000052748 ENSMUST00000086279,ENSMUST00000064771,ENSMUST00000111883 3 3 3 80 1 153248258 153248277 GACCGAGTATTAAAGTGCTG 58 153244469 153248215 ATTTCTATCATCCGTGCAC 57 NA Mus musculus 50 Defb38 ENSMUSG00000053790 ENSMUST00000066416 2 1 1 104 8 19026495 19026513 TTCTGCTACTGATCCTCTC 57 19023535 19023553 ATTCAAAGTAGTGACAGGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Klhl18 ENSMUSG00000054792 ENSMUST00000111934 3 1 3 117 9 110339944 110339962 TATCATCTGATGCCAGAGC 58 110338747 110339863 AATTTGCTGCTGAGTTGAG 58 NA DesignNoJunction Mus musculus 50 Atrnl1 ENSMUSG00000054843 ENSMUST00000059255 3 1 2 145 19 57789176 57789194 GTACTATGGAGACCCAACC 58 57806130 57806276 AGAACTGACAATACAGCTGG 59 NA Mus musculus 50 Eef1d ENSMUSG00000055762 ENSMUST00000109972,ENSMUST00000089681,ENSMUST00000089680,ENSMUST00000073802,ENSMUST00000023235,ENSMUST00000109976,ENSMUST00000116440,ENSMUST00000109975 3 8 9 130 15 75726770 75726788 AAGAAGATAAGGAGGCTGC 59 75726342 75726676 AGTCTCATCATCCCAAGGT 59 NA DesignRelaxed Mus musculus 50 9530098N22Rik ENSMUSG00000055960 ENSMUST00000106565,ENSMUST00000069769,ENSMUST00000106566,ENSMUST00000106564 1 4 4 80 4 111797792 111808580 TGATCAATCTGAGGGTACC 58 111808623 111808642 GCAAACACTGAAATTATGGG 57 NA Mus musculus 50 Eif3b ENSMUSG00000056076 ENSMUST00000100507,ENSMUST00000075771 1 2 2 80 5 140903451 140903471 GACAAGTTCAAGCAGATTCAG 59 140903511 140906015 TACCAAGTATCTTTCACACGG 59 NA Mus musculus 50 Sh3rf2 ENSMUSG00000057719 ENSMUST00000072008,ENSMUST00000074679 2 2 2 152 18 42300744 42309274 AGTCTTCAGTTCAACAGCT 58 42309390 42309408 ACAGATTTGAAGGGTCCAC 59 NA Mus musculus 50 Sema3b ENSMUSG00000057969 ENSMUST00000102532,ENSMUST00000073448,ENSMUST00000102529,ENSMUST00000102531,ENSMUST00000102530 2 5 5 80 9 107502870 107503171 TTCATTGGTACAGATGTGGG 59 107502809 107502830 GAGAAGTCCTTCAGAATTAGGT 59 NA Mus musculus 50 Hist1h2bg ENSMUSG00000058385 ENSMUST00000079251 2 1 2 60 13 23663652 23663670 GGCTGTCACTAAGTACACC 59 23663693 23663712 CTTTGGGTTAGGAGTGTGAG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Zc3h4 ENSMUSG00000059273 ENSMUST00000098791,ENSMUST00000086119 2 2 4 84 7 17011094 17011112 GAACTGCATCAATGGTGAC 59 17011158 17014348 AGCCAACATCTTATCTAGGAG 58 NA Mus musculus 50 Chpt1 ENSMUSG00000060002 ENSMUST00000020253 3 1 3 81 10 87945027 87945046 AGATCCAGGTAGCTTTAGTG 58 87943681 87944986 AGAATAGGTATCGTATAGTCCC 57 NA Mus musculus 50 OTTMUSG00000002349 ENSMUSG00000060288 ENSMUST00000106319 2 1 5 64 4 118983442 118989641 CTTTCCATGAATGTTCCCAC 59 118983397 118983415 CACTGTGAGATCACCACTG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Nlrp9b ENSMUSG00000060508 ENSMUST00000094751 2 1 2 150 7 20631274 20634784 GAGTTATGGTTAGACCTGTG 57 20634897 20634915 GATTCAAAGCCTCACAGAG 58 NA Mus musculus 50 9330158F14Rik ENSMUSG00000061171 ENSMUST00000112418 3 1 6 80 2 65201456 65201474 CGGAGGGAAATCTAGTCAG 58 65196236 65201414 AGGGAGAAGTCTATTATCCCA 59 NA Mus musculus 50 Sfmbt2 ENSMUSG00000061186 ENSMUST00000070103 2 1 8 87 2 10359584 10359603 CAAGTACTCAGACTGGACAG 59 10359650 10359673 GCAATACATACATTCCAGAAGG 59 NA Mus musculus 50 Cnr2 ENSMUSG00000062585 ENSMUST00000097843,ENSMUST00000068830 2 2 2 60 4 135472795 135472813 AACTTTGTCATCTTCCACG 57 135472837 135472855 TCTTCAGCAGGAAGATAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lilrb4 ENSMUSG00000062593 ENSMUST00000105482,ENSMUST00000105479 1 2 7 126 10 51211888 51211906 ACATTCAGATGCTATGGCT 58 51213001 51214607 CAGAAGCATCATCTTCAGTG 58 NA Mus musculus 50 Crem ENSMUSG00000063889 ENSMUST00000082141,ENSMUST00000025069 3 2 6 88 18 3276716 3287909 TGTTCAAGATGAGGAGACTG 59 3273532 3273550 TAGTAGGAGCTCGGATCTG 59 NA Mus musculus 50 Tank ENSMUSG00000064289 ENSMUST00000078074,ENSMUST00000112501,ENSMUST00000112502,ENSMUST00000112495,ENSMUST00000112497,ENSMUST00000112494 2 6 7 114 2 61465888 61481781 CAATCAAAGGTGAGACGAC 58 61482379 61482398 CTTTAAGGTCCCAGAAAGTC 57 NA Mus musculus 50 Aurkaip1 ENSMUSG00000065990 ENSMUST00000105592,ENSMUST00000105591,ENSMUST00000084097 1 3 3 168 4 155206831 155206849 CAAGTACCGTAAACTGGTC 57 155207074 155207092 CTTCAGGTAGATCTTCGGG 58 NA DesignNoJunction Mus musculus 50 Evi2b ENSMUSG00000070354 ENSMUST00000093983 3 1 1 68 11 79337114 79337132 CTGCGAAAGAAGTTCACAG 59 79330215 79330233 CAAAGCACAATGAAGACCA 58 NA DesignNoJunction, InUTR Mus musculus 50 Hist2h3c2 ENSMUSG00000070392 ENSMUST00000090779 3 1 2 60 3 96052050 96052070 ACTATTCTTCTGTCCAGACTC 58 96052092 96052110 TTAGACCAGGGTTGTTGAG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ifna7 ENSMUSG00000070907 ENSMUST00000105143,ENSMUST00000094976 1 2 2 114 4 88462579 88462597 ATCACTGTGTTCCTGAGAG 58 88462675 88462693 TCTCACTCAATCTTGCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp97 ENSMUSG00000073452 ENSMUST00000115583 1 1 2 143 17 17271312 17279710 AAACCAATAACGCAGTGAC 58 17279816 17280077 AGTTATAGCCTATGGCAGTG 58 NA Nonspecific Mus musculus 50 Ceacam1 ENSMUSG00000074272 ENSMUST00000098669,ENSMUST00000098666 2 2 4 102 7 26257088 26258830 CATTACAGTCCTTGAGCCA 59 26257004 26257022 AATGTCATTCGACAAGCAG 58 NA Mus musculus 50 Bglap-rs1 ENSMUSG00000074489 ENSMUST00000107543,ENSMUST00000107542,ENSMUST00000075523 2 3 3 92 3 88172801 88173025 CTACCTTGGAGCTTCAGTC 59 88172727 88172745 TGGTTTGATAGCTCGTCAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Lcmt2 ENSMUSG00000074890 ENSMUST00000099486,ENSMUST00000110674 3 2 2 60 2 120964590 120964609 AATAGATATCCAGCCCTCCA 59 120964549 120964567 TCCATTAAACACATGAGCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Fnbp1 ENSMUSG00000075415 ENSMUST00000113564,ENSMUST00000113562,ENSMUST00000113561,ENSMUST00000073879,ENSMUST00000113560,ENSMUST00000100208,ENSMUST00000075326,ENSMUST00000100207,ENSMUST00000113555 2 9 12 73 2 30892101 30892119 GACTGTATGATGGCCAGAC 59 30891759 30892064 GTAACTACCATCTGGGCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Defb43 ENSMUSG00000075572 ENSMUST00000100491 2 1 1 60 14 63630679 63630700 CACCTTGTTATCCATAGTTCCT 59 63636629 63636649 CTTTGAACAGTCCTGATTCTC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp652 ENSMUSG00000075595 ENSMUST00000107717,ENSMUST00000091565 3 2 2 90 11 95614710 95614729 CTGTGGAAAGTCTTTCAAGC 59 95614782 95615233 ATCGCAGTTCTCACATCTG 59 NA Mus musculus 50 IGHE ENSMUSG00000076611 ENSMUST00000103413,ENSMUST00000103414,ENSMUST00000103415 1 3 3 126 12 114510234 114510334 GAGATGCCCAGATCATGAG 59 114510126 114510144 ATTCTTCTCGCTTTCCAGG 59 NA Mus musculus 50 A8Y5P7_MOUSE ENSMUSG00000078716 ENSMUST00000107865,ENSMUST00000107864,ENSMUST00000107866 3 3 3 129 4 43693545 43693563 ATGTCAGTACCTGCTTCAG 58 43693655 43693927 CACAAAGACCTTGTACAAGG 58 NA Mus musculus 50 Cpt1b ENSMUSG00000078937 ENSMUST00000109313,ENSMUST00000052315 1 2 2 80 15 89254217 89254381 CAATTCACCGGTACTTGGA 59 89254155 89254173 ATTCCTTGGCCAATGTCTC 59 NA Mus musculus 50 Xpo6 ENSMUSG00000000131 ENSMUST00000009344 2 1 1 80 7 133292800 133292819 AGAATCGAGTCCTATTCCCA 59 133284180 133292758 ATGAGTAGGCTGATGAAACG 59 NA Mus musculus 50 Pemt ENSMUSG00000000301 ENSMUST00000102693,ENSMUST00000102692,ENSMUST00000000310,ENSMUST00000093052 1 4 5 114 11 59787582 59787600 GTACAGCCAACTACCTAGG 58 59784369 59784697 GTGAAGGGCTCTTCATATAGG 59 NA Nonspecific Mus musculus 50 Ilf2 ENSMUSG00000001016 ENSMUST00000107354,ENSMUST00000001042 2 2 2 80 3 90291007 90291155 CCTAGAACAACAGGATATGG 57 90291198 90291216 AGGATCTTCCTAAAGCCTC 58 NA Mus musculus 50 Klhl10 ENSMUSG00000001558 ENSMUST00000001599,ENSMUST00000107395 2 2 2 85 11 100309045 100317610 ATGGGAAGGTCTACATATGTG 58 100317657 100317675 CCATTGATTGCTCTCAGTG 58 NA Mus musculus 50 Bcap31 ENSMUSG00000002015 ENSMUST00000002091 1 1 1 80 X 70957833 70957851 GTTGGTAGTGACCTATGGC 59 70952471 70957791 TCTCGTACAGCATCAATAACC 59 NA Mus musculus 50 Foxn1 ENSMUSG00000002057 ENSMUST00000108294,ENSMUST00000002126 3 2 2 80 11 78175131 78179457 TTCCCTTACTTCAAGACTGC 59 78175070 78175090 CTTCTCAAAGCACTTGTTGAG 59 NA Mus musculus 50 Clpp ENSMUSG00000002660 ENSMUST00000002735 1 1 1 135 17 57132964 57135306 CTACAGGTGATCGAGTCAG 58 57135405 57135423 CCTTCTGTACCAGTTCTGG 59 NA Mus musculus 50 Col5a3 ENSMUSG00000004098 ENSMUST00000004201 1 1 1 80 9 20575742 20576038 GGAAGAAGTTCTCCTATGTGG 59 20575682 20575700 CAGCACTCAACAACTTCAG 58 NA Mus musculus 50 Spic ENSMUSG00000004359 ENSMUST00000004473 2 1 1 92 10 88141333 88141351 CTTATCCTCACGTCAGAGG 58 88140344 88141278 CAGAACCATTTGTTACACCT 58 NA Mus musculus 50 Wwox ENSMUSG00000004637 ENSMUST00000109108,ENSMUST00000109107,ENSMUST00000004756 3 3 3 82 8 116963777 116968385 AATCACACTGAGGAGAAGAC 59 116968430 116969255 CATCCATACGGCAAATCTC 58 NA Mus musculus 50 1700037C18Rik ENSMUSG00000005983 ENSMUST00000006139 1 1 3 121 16 3897323 3897341 TATCATTCCCACAATGGCA 58 3895406 3897238 AGGACTCTTCTGAGTATGC 58 NA InUTR Mus musculus 50 Qrich1 ENSMUSG00000006673 ENSMUST00000006851 1 1 2 80 9 108459308 108459326 AGAGCAAACAGAGAATCCA 58 108459369 108461585 CTCTGAGGGCATTTAAAGAG 57 NA Mus musculus 50 4933406E20Rik ENSMUSG00000006675 ENSMUST00000006853 1 1 1 123 9 108482158 108482355 GATGAAATGAGTCTGATTCAGG 58 108482056 108482074 CAGGAAGGTAGTTGTACCA 58 NA Mus musculus 50 Crlf1 ENSMUSG00000007888 ENSMUST00000110112,ENSMUST00000008032 3 2 2 144 8 73027317 73027335 TGCTCGAACCTTAGTTTCC 59 73027726 73027746 CTATCCTTAGAGTTTAGCCGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Cd163 ENSMUSG00000008845 ENSMUST00000112541,ENSMUST00000032234 3 2 2 80 6 124259276 124261413 ATTTGCTTAGAGGGAGCAG 59 124261455 124261475 GAATCTCACTTCCAATCTTCC 58 NA Mus musculus 50 Tex22 ENSMUSG00000012211 ENSMUST00000012355,ENSMUST00000109729 2 2 2 166 12 114313540 114313558 CTTGCTCAAGAGCAAAGAC 59 114326731 114326749 TCATCGATGCTGATGTTCC 59 NA DesignNoJunction Mus musculus 50 Lass2 ENSMUSG00000015714 ENSMUST00000015858 3 1 1 81 3 95124090 95124109 GCCTCAGATCTCTACATCAC 59 95124153 95124577 GTGTTGCCACATAAAGCTC 59 NA Mus musculus 50 Syt14 ENSMUSG00000016200 ENSMUST00000016344 1 1 1 80 1 194727998 194728016 CACTGGAAGACTATCAGCA 58 194723805 194727956 ACATATGTATTGGGTGGTCTG 59 NA Mus musculus 50 Kcnq2 ENSMUSG00000016346 ENSMUST00000016491,ENSMUST00000049792,ENSMUST00000103047,ENSMUST00000103048,ENSMUST00000081528,ENSMUST00000103051,ENSMUST00000103050,ENSMUST00000103049,ENSMUST00000080022,ENSMUST00000072952 2 10 10 129 2 180848376 180848394 ACTATCGTGGTATTCGGTG 58 180847932 180848285 GCACCATGATATCAATCACAC 59 NA Mus musculus 50 Dusp14 ENSMUSG00000018648 ENSMUST00000018792,ENSMUST00000100705,ENSMUST00000108101 2 3 3 191 11 83862806 83864346 AAATCCTTAGCACGAAGGAG 59 83862634 83862652 CAATGCCTCCTATGTCTCC 59 NA InUTR Mus musculus 50 Zbtb4 ENSMUSG00000018750 ENSMUST00000108642,ENSMUST00000100978 2 2 7 60 11 69589928 69589947 CCTAGAACAGATGGAGAGTG 58 69595312 69595330 TTCTAAATCTTGCGTGCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Smyd4 ENSMUSG00000018809 ENSMUST00000044530 3 1 1 81 11 75195827 75195847 CTACAGAGAAGAAGGAAACAG 57 75195890 75200924 ATGAGACACTCCCTTAGAG 57 NA Mus musculus 50 Il3 ENSMUSG00000018914 ENSMUST00000019058 3 1 1 80 11 54080592 54080612 CAAGGAGATTATAGGGAAGCT 58 54079443 54080455 CGAAAGCTCTTATTCCTCAG 58 NA Mus musculus 50 Plod1 ENSMUSG00000019055 ENSMUST00000019199,ENSMUST00000105713 3 2 4 81 4 147292937 147292957 CTTTCCCTGGATAACTACCAG 59 147292296 147292894 TTTCTTTCCAGTCCTCAGG 58 NA Mus musculus 50 Vip ENSMUSG00000019772 ENSMUST00000019906 2 1 1 83 10 4705860 4705881 ATTCCTGATACTCTTCAGTGTG 59 4704064 4705816 TCCAGCCTACTCACTACAG 59 NA Mus musculus 50 Serinc1 ENSMUSG00000019877 ENSMUST00000020027 2 1 1 82 10 57239390 57239512 TTATTCGAGCATCCGTACC 59 57239326 57239347 CATCCTCTATCAATGTTGACTC 58 NA Mus musculus 50 Rspo3 ENSMUSG00000019880 ENSMUST00000092623 2 1 1 90 10 29224448 29224466 CTTACACCTTGGAAAGTGC 58 29219925 29224396 CTCACAGTGTACAATACTGAC 58 NA Mus musculus 50 Uhrf1bp1l ENSMUSG00000019951 ENSMUST00000020112 3 1 1 80 10 89253415 89253434 GACCGTAATTTAGGTTCACC 58 89253476 89254124 CAGAGTTGAGTCTTTCTCTG 57 NA Mus musculus 50 Ahi1 ENSMUSG00000019986 ENSMUST00000095801,ENSMUST00000105525 3 2 2 80 10 20683689 20685331 AAGATGACAGTGAACGTCC 59 20685374 20685393 ATGGCTGTGTCATAATAGGG 59 NA Mus musculus 50 Slc16a7 ENSMUSG00000020102 ENSMUST00000063318,ENSMUST00000105257 1 2 2 80 10 124670542 124670561 ATGATCTTGGCTTCTTACAG 57 124668444 124670501 GAATGCTAATCCTAAACCTCC 58 NA Mus musculus 50 Polrmt ENSMUSG00000020329 ENSMUST00000020580 2 1 1 85 10 79199168 79199188 CATCAAGTCCCTAAAGTCCTC 59 79199020 79199121 CGAAGGTACCTGTCTTTGG 59 NA Mus musculus 50 Spns3 ENSMUSG00000020798 ENSMUST00000092940,ENSMUST00000021154 3 2 2 80 11 72352682 72353931 TTCATCTCCTACCAGTATTCCT 59 72352623 72352641 AATGGTGGAATAGCTTGCT 59 NA Mus musculus 50 Bdkrb2 ENSMUSG00000021070 ENSMUST00000001652 2 1 1 110 12 106826410 106826429 GATCCTCACTCCTCTTTGTC 59 106826502 106829792 CATTTCGATGCCAAAGGAG 59 NA InUTR Mus musculus 50 2810452K22Rik ENSMUSG00000021276 ENSMUST00000043716,ENSMUST00000021705,ENSMUST00000021704 2 3 3 87 12 112122159 112122178 TAATCCTGAAATGGGACAGC 59 112118016 112122110 TCTTTACTCAGCAAGCTGAC 59 NA Mus musculus 50 Cd180 ENSMUSG00000021624 ENSMUST00000022124 2 1 1 73 13 103492932 103494787 TCCTGGATTTAACCAGGTG 58 103494824 103494842 TGTGTCTAACCGATGTTGG 59 NA DesignNoJunction Mus musculus 50 Jmy ENSMUSG00000021690 ENSMUST00000065537 3 1 1 80 13 94229621 94229639 CTTTGCAGATGATGAGAGC 58 94224033 94229577 CCTGTAAGCTTTGCATCTC 58 NA Mus musculus 50 Nkiras1 ENSMUSG00000021772 ENSMUST00000022294 2 1 1 89 14 19109241 19109259 CAAGGTTGTCATTTGTGGG 59 19109311 19110827 TCTTCCATCCCAATAGTGTG 59 NA Mus musculus 50 4930401A09Rik ENSMUSG00000022249 ENSMUST00000022857 3 1 1 80 15 10463431 10463450 AAGAAATCGCTCAGATCGAG 59 10460439 10463389 CACAGATAGAATAGGCCTGC 59 NA Mus musculus 50 Fzd6 ENSMUSG00000022297 ENSMUST00000022906 1 1 1 87 15 38857400 38862370 ATGTAACAGATTGCCACAC 58 38862421 38862439 ATCTGATTTCTTCTGTGGC 57 NA Mus musculus 50 Khdrbs3 ENSMUSG00000022332 ENSMUST00000022954 1 1 1 80 15 68860327 68879817 CCTATGGAGAGTATGACTATGAC 59 68879856 68879875 TGTAGCTGTTGTCATAGGAG 58 NA Mus musculus 50 Sqle ENSMUSG00000022351 ENSMUST00000022977,ENSMUST00000100640 2 2 2 81 15 59155210 59155228 CTCCAAGTTCAGGAAGAGC 59 59155273 59155370 TGGTGCATCCTTCATAAGG 59 NA Mus musculus 50 Hoxc10 ENSMUSG00000022484 ENSMUST00000001699 2 1 1 104 15 102798024 102801233 GATAACGAAGCTAAAGAGGAG 57 102801297 102801317 CGTCTGGTGTTTAGTATAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ly6h ENSMUSG00000022577 ENSMUST00000023241,ENSMUST00000065417 1 2 2 138 15 75395754 75396013 AGCAGGAAGGATCATTCTG 59 75395632 75395650 CAAATCTTTCTCGCAGCAG 59 NA DesignNoJunction Mus musculus 50 Dlg1 ENSMUSG00000022770 ENSMUST00000115205,ENSMUST00000115201,ENSMUST00000064477,ENSMUST00000100001,ENSMUST00000115207,ENSMUST00000023454,ENSMUST00000115196 2 7 8 80 16 31836326 31836345 AATAGCAGTGTCAGTTCAGG 59 31836386 31838151 ATAATCAAAGAGGGCTCTGAC 59 NA Mus musculus 50 Atp5j ENSMUSG00000022890 ENSMUST00000023608 1 1 3 87 16 84831742 84835061 AGTGCAAGTACAGAGACTC 58 84831673 84831691 TTCAAATGCACAGAGACTG 57 NA InUTR Mus musculus 50 Ifngr2 ENSMUSG00000022965 ENSMUST00000023687 3 1 1 81 16 91561954 91561972 CTCAAATACCAAAGCCGAG 58 91562015 91563128 GGTCCTTTAGATACTCTTCGA 58 NA Mus musculus 50 Pcdhgc5 ENSMUSG00000023036 ENSMUST00000091935 1 1 9 127 18 37899180 37984675 GACACTCCTTTGGTTCCTC 59 37992950 37992969 GTATCAAACTGGTTGTTGGG 59 NA DesignNoJunction Mus musculus 50 Pcdhgc5 ENSMUSG00000023036 ENSMUST00000044851 1 1 9 121 18 37928182 37984680 TGCATTAAATCAGCAAGCC 59 37992950 37992968 TATCAAACTGGTTGTTGGG 57 NA DesignNoJunction Mus musculus 50 Ache ENSMUSG00000023328 ENSMUST00000024099,ENSMUST00000085934 2 2 3 69 5 137733154 137733175 CGACTTATGAAATACTGGACCA 59 137734409 137734427 GAGATTTGGAGTCTCGAGG 59 NA DesignNoJunction Mus musculus 50 Spry4 ENSMUSG00000024427 ENSMUST00000025295 3 1 1 61 18 38750237 38750256 TCACCATCTTACCCATTGAC 59 38750195 38750216 GTTGTCTATGTAGTCATTCTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ap3s1 ENSMUSG00000024480 ENSMUST00000025357 3 1 1 193 18 46940408 46949554 CTGGAGAAATCTGAGGCTG 59 46949710 46949729 CTTAGATGACGTTCCCTCTG 59 NA InUTR Mus musculus 50 Eif4ebp3 ENSMUSG00000024483 ENSMUST00000116653,ENSMUST00000036765 2 2 6 80 18 36825096 36825251 GGTAGAAATAACCGATGACGA 59 36825290 36825311 CTCCTTCCATTACTCCATACAG 59 NA InUTR Mus musculus 50 Rax ENSMUSG00000024518 ENSMUST00000025396 3 1 1 133 18 66097773 66097791 GTTCACCACTTACCAACTG 58 66095128 66097676 GGTTCTGGAACCATACCTG 59 NA DesignRelaxed Mus musculus 50 Sall3 ENSMUSG00000024565 ENSMUST00000025457,ENSMUST00000057950 1 2 2 130 18 81168023 81168041 CATGTGGGAAGACCTTCTC 59 81166635 81167930 CATGTGTACCTTGAGATTGC 58 NA Mus musculus 50 Coro1b ENSMUSG00000024835 ENSMUST00000008893 3 1 1 80 19 4149916 4149935 TCTGGATATTGACTGGTGTC 58 4149978 4150100 ATCTGCCATACCATGACAG 59 NA Mus musculus 50 Cyp26a1 ENSMUSG00000024987 ENSMUST00000025946 1 1 1 80 19 37775251 37775508 TGAGCTGAATGGATACCAG 58 37775552 37775570 AAGATATCTGCCACATCGT 58 NA Mus musculus 50 Dnmbp ENSMUSG00000025195 ENSMUST00000026209,ENSMUST00000112037 2 2 2 61 19 43929614 43931005 TCTTCACACGGTTTAAAGAG 57 43929572 43929590 CAACAACTGGTTTAAGGGA 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Dnajc14 ENSMUSG00000025354 ENSMUST00000105231,ENSMUST00000026410 1 2 2 80 10 128251670 128251690 GTCGAAACTACAAGATGACCT 59 128251731 128253776 TCAAACCTCCTATGCTTTCC 59 NA Mus musculus 50 Syce1 ENSMUSG00000025480 ENSMUST00000026553 2 1 1 81 7 147966408 147966426 AAAGAAAGCCAGTGAGGAG 59 147965819 147966365 CTCTTCACGTAGTAAGTCCAG 59 NA Mus musculus 50 Ifitm5 ENSMUSG00000025489 ENSMUST00000026562 2 1 1 102 7 148135269 148135287 AAGTGCTACAACATCCTGG 59 148135185 148135203 CTTTGGCTAACTTGGACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nudt5 ENSMUSG00000025817 ENSMUST00000026927,ENSMUST00000114962 3 2 2 102 2 5775946 5775964 CCTTGTTACCTCAGAGGAG 58 5777091 5782088 CACTGTTTCCCAAGTTCTG 58 NA Mus musculus 50 Fastkd2 ENSMUSG00000025962 ENSMUST00000027103,ENSMUST00000087369 2 2 2 80 1 63785864 63785883 AACATCGTTTCTATCCTGCA 59 63785925 63792431 CAGAGCTTCTAGGAACTCTC 58 NA Mus musculus 50 Cflar ENSMUSG00000026031 ENSMUST00000114313,ENSMUST00000069333 3 2 3 92 1 58789155 58792506 CAAGTATAACTCAAGGCTCCA 59 58797110 58797128 ATGGATGTCTTCACCAGTG 59 NA Mus musculus 50 Il1r1 ENSMUSG00000026072 ENSMUST00000027241,ENSMUST00000114795 2 2 2 80 1 40359259 40367135 CAGTTAATATACCCAGTCCCT 58 40367177 40367195 ACAGCATACAATTGTAGCC 57 NA Mus musculus 50 Cfc1 ENSMUSG00000026124 ENSMUST00000027298 1 1 1 93 1 34593085 34593206 GGGATACAGTTATCAGAGCG 59 34593262 34593280 CAGAGTTCTGTCCAGTGTC 59 NA Mus musculus 50 Klhl12 ENSMUSG00000026455 ENSMUST00000027725,ENSMUST00000112232,ENSMUST00000116528 3 3 3 80 1 136385689 136385917 CAATTGCAGGATACGATGG 58 136385961 136385979 CTACTACTTCCCAGCTGTC 58 NA Mus musculus 50 Lhx6 ENSMUSG00000026890 ENSMUST00000112960,ENSMUST00000112963,ENSMUST00000112967,ENSMUST00000112966,ENSMUST00000112961,ENSMUST00000072054,ENSMUST00000053815 2 7 7 158 2 35958994 35959012 GACAAGGACGAAGGTAGAG 59 35958486 35958871 ATGAGGTTGTTGACCTTGAG 59 NA Mus musculus 50 Il1rn ENSMUSG00000026981 ENSMUST00000028358,ENSMUST00000114487,ENSMUST00000114486,ENSMUST00000114482,ENSMUST00000114485 3 5 5 107 2 24204053 24204073 CCTATTGACCTTCATAGTGTG 57 24204142 24204946 GATGTTAACTTCCTCCAGC 57 NA Mus musculus 50 Ube2e3 ENSMUSG00000027011 ENSMUST00000028398 3 1 1 101 2 78753872 78753890 CTATACTTGGTCCACCAGG 58 78753955 78758853 GGAAAGTAACCTTTGGTGG 58 NA Mus musculus 50 Sp3 ENSMUSG00000027109 ENSMUST00000102689,ENSMUST00000066003,ENSMUST00000100018 1 3 3 80 2 72784788 72808224 GACAGTCCTGCAGATATTAGG 59 72784728 72784747 GTTCAGTGTAGAGTCACCAC 59 NA Mus musculus 50 Api5 ENSMUSG00000027193 ENSMUST00000028617 3 1 1 84 2 94265185 94265204 ATTTCTGTGAGCAAGTTCTC 58 94263648 94265139 AACTTTAATACCTCCAGCTG 57 NA Mus musculus 50 Prnd ENSMUSG00000027338 ENSMUST00000110169,ENSMUST00000110171,ENSMUST00000110170 3 3 6 89 2 131779266 131779285 GTTTCGTTTGGTTCATTGTG 58 131780575 131780593 AGTTATTTCCAGATCCCGC 59 NA DesignNoJunction, InUTR Mus musculus 50 Rbck1 ENSMUSG00000027466 ENSMUST00000028964,ENSMUST00000109847 3 2 2 94 2 152144514 152144532 ATGAATTGCAGGGAGTACC 59 152144181 152144456 TGCAGCATTACCTTTAGCA 59 NA Mus musculus 50 Cstf1 ENSMUSG00000027498 ENSMUST00000029000,ENSMUST00000116375 2 2 2 94 2 172201332 172201350 TTGATAGCCACAGGATCTG 58 172201407 172201562 TTCATCATGACCTCAATTGG 57 NA Mus musculus 50 1700030G11Rik ENSMUSG00000027517 ENSMUST00000029022,ENSMUST00000109112 1 2 2 80 2 173398039 173398060 TATGTATCTGGCATTACGATGG 59 173396699 173397999 CAAGACATGACATCTTGCTG 59 NA Mus musculus 50 Zfp64 ENSMUSG00000027551 ENSMUST00000109162,ENSMUST00000029064 1 2 5 60 2 168732341 168732359 CTTTAACTGCCGCTATCCA 59 168731606 168731624 GTCCAAATCTTTCATGCCA 58 NA DesignNoJunction, InUTR Mus musculus 50 a ENSMUSG00000027596 ENSMUST00000109697,ENSMUST00000029123,ENSMUST00000109696 2 3 3 81 2 154871504 154873416 TGTTTCTATCGTGGCACTG 59 154873460 154873696 TTTCTTGGAAGACCTCTTCC 59 NA DesignNoJunction Mus musculus 50 Nfs1 ENSMUSG00000027618 ENSMUST00000029147,ENSMUST00000109600 1 2 2 75 2 155969117 155969135 CTCTACATGGACGTACAGG 58 155967936 155967954 AGTTGACAAGGTATGGGAG 58 NA DesignNoJunction Mus musculus 50 Tm4sf4 ENSMUSG00000027801 ENSMUST00000029377 1 1 1 80 3 57237700 57237719 AGCTGTTTCTATCAACAAGG 57 57237762 57241506 AGATAATCACCATCGTGGA 57 NA Mus musculus 50 Tsc22d2 ENSMUSG00000027806 ENSMUST00000099090 3 1 2 104 3 58232181 58232199 CATTTGAACACGTGTCAGG 59 58263298 58263941 TTTCACCAGATCCATTGCT 59 NA Mus musculus 50 1700013F07Rik ENSMUSG00000027886 ENSMUST00000106624 2 1 2 82 3 108340544 108340562 AGCCTCAGGAAACTTTCTC 59 108340608 108345414 CAGCGATTTCTTAGAAGCC 58 NA Mus musculus 50 Nup210l ENSMUSG00000027939 ENSMUST00000029548 1 1 1 80 3 89963918 89971666 AGCAACTGATTCCTGTGTC 59 89971710 89971728 TATCAAACTTCCTCCCGTG 58 NA Mus musculus 50 Clta ENSMUSG00000028478 ENSMUST00000107845,ENSMUST00000107846,ENSMUST00000107851,ENSMUST00000107849,ENSMUST00000107847,ENSMUST00000078664 2 6 6 85 4 44031710 44032751 TGAATACTACCAGGAGAGC 57 44032800 44032818 TACTTTCAGGCTCTGACTG 58 NA Mus musculus 50 Artn ENSMUSG00000028539 ENSMUST00000070816,ENSMUST00000097913 3 2 2 96 4 117600276 117600294 AAAGCTATGGAACTGGGAC 59 117599874 117599892 CTAGAACAGCTAGGGTTGG 59 NA DesignNoJunction, InUTR Mus musculus 50 0610037L13Rik ENSMUSG00000028608 ENSMUST00000106727,ENSMUST00000106726,ENSMUST00000030347,ENSMUST00000106725 3 4 5 197 4 107562800 107564080 ACCTGAAGATGAAATGTGG 57 107565939 107565957 ACTTCTCATTGTCTTCAGC 57 NA Mus musculus 50 Lrrc41 ENSMUSG00000028703 ENSMUST00000030471 2 1 1 80 4 115767769 115767790 CCATGATATGAATCTTGCAGAC 59 115767828 115768409 GAGAAGGTAATCTCTTGAAGGG 59 NA Mus musculus 50 Cda ENSMUSG00000028755 ENSMUST00000030535 3 1 1 183 4 137899471 137907108 CCATCTCTAGTGACTTGCA 58 137894800 137894818 CACTGAATCTTCTGCAGGT 59 NA Mus musculus 50 Nsg1 ENSMUSG00000029126 ENSMUST00000031009 3 1 1 80 5 38536050 38546856 GAGGTTTAAGGTCTCCGTG 59 38535988 38536008 TACACTTTGTAGACAACCAGG 59 NA Mus musculus 50 D5Ertd579e ENSMUSG00000029190 ENSMUST00000066244 2 1 3 60 5 37064020 37064038 TATCCTCAGTCTTCTGCTG 58 37063978 37063996 AATACCTACCTGTTCCTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Gabra4 ENSMUSG00000029211 ENSMUST00000031121 2 1 1 80 5 72032352 72032370 ACATAACATGACAGCTCCA 58 72032138 72032310 CTTATGGTGAGTCTCATTGTG 58 NA Mus musculus 50 Actb ENSMUSG00000029580 ENSMUST00000031564,ENSMUST00000100497 2 2 2 64 5 143665916 143666030 CTTCTTGGGTATGGAATCCT 58 143665871 143665889 CGTCACACTTCATGATGGA 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Pot1a ENSMUSG00000029676 ENSMUST00000115330,ENSMUST00000115329,ENSMUST00000115327 3 3 3 121 6 25750326 25750346 GTCAGTAAAGTATAGCAGCAG 58 25744663 25748015 AGCTGTTGAAACCAAAGAC 58 NA InUTR Mus musculus 50 Gnb2 ENSMUSG00000029713 ENSMUST00000031726,ENSMUST00000111027 2 2 2 117 5 137970990 137971088 TACACCACTAACAAGGTCC 58 137970891 137970909 AGATGGAGCAGATGTTGTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Pop7 ENSMUSG00000029715 ENSMUST00000111035,ENSMUST00000031728 1 2 2 83 5 137943154 137943172 GACTGACTTTAAGGCCCAG 59 137943089 137943107 TAGATTTCAGTGCATGCGT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ssbp1 ENSMUSG00000029911 ENSMUST00000114779,ENSMUST00000031971 3 2 2 133 6 40426383 40426401 TTACTTGGACGAGTAGGTC 58 40426498 40426756 CTAACGTCACCCATTTGGT 59 NA DesignRelaxed Mus musculus 50 Copg ENSMUSG00000030058 ENSMUST00000049966,ENSMUST00000113607 1 2 2 60 6 87840006 87840186 CTTCCAGTCCAATGATCCC 59 87840210 87840228 GGACATCTCCTTGATGGTC 59 NA DesignNoJunction Mus musculus 50 Kcnj8 ENSMUSG00000030247 ENSMUST00000032374 1 1 1 80 6 142518577 142518597 CTATGCTTACATGGAGAAAGG 58 142515017 142518535 GTGAATGACCTGACATTGG 58 NA Mus musculus 50 Jmjd5 ENSMUSG00000030752 ENSMUST00000033010 2 1 1 84 7 132598760 132599953 GAAGAAGTGGAGTCTGCAG 59 132600000 132600019 TTCATCTGTGTACCTTGAGC 59 NA Mus musculus 50 Otud5 ENSMUSG00000031154 ENSMUST00000115666,ENSMUST00000115668,ENSMUST00000115665,ENSMUST00000115667,ENSMUST00000033494 1 5 5 80 X 7445184 7449126 CATTTAAGCCAGGGTTTGC 59 7449169 7449188 TTTGCTGTTCAATCCATGAC 59 NA Mus musculus 50 Nsdhl ENSMUSG00000031349 ENSMUST00000033715 1 1 1 80 X 70201709 70201727 GGAGAATGTGGTTCATGGA 59 70201771 70202631 ATGTGAAATGCCTTTCCAC 58 NA Mus musculus 50 Syap1 ENSMUSG00000031357 ENSMUST00000033723 2 1 1 81 X 159310578 159316273 CTTTATCAGCTGACAAGAGG 57 159310516 159310535 GGGTACATCTGATCAAAGTC 57 NA Mus musculus 50 Cngb1 ENSMUSG00000031789 ENSMUST00000070212 2 1 1 80 8 97781850 97783042 TACGTTTACAGAGTCATCAGG 59 97781790 97781808 TGATGCCCAGTAGTAAAGG 58 NA Mus musculus 50 2810004N23Rik ENSMUSG00000031984 ENSMUST00000034465 3 1 1 199 8 127365267 127365591 CTAAGCCTCCCAAGAACAC 59 127363818 127363836 TCCAACTTGTCCACTTGAC 59 NA DesignNoJunction Mus musculus 50 Cul5 ENSMUSG00000032030 ENSMUST00000034529 3 1 1 80 9 53426110 53429279 ATATTAAGAACCCAGGAAGCC 59 53426050 53426068 TAATTCAGTCTGCAGCTGG 59 NA Mus musculus 50 1600029D21Rik ENSMUSG00000032068 ENSMUST00000114474 1 1 2 109 9 50307390 50309181 TAAAGTCAACCTGCAGGTC 59 50312401 50312420 CAGAACTCTCAGGAATAGGG 58 NA Mus musculus 50 Fbxo22 ENSMUSG00000032309 ENSMUST00000093842,ENSMUST00000034859 1 2 2 80 9 55068931 55068952 GCGATATGAATATCATCTTGGC 59 55068990 55071063 CAATATCCAGAGGGTTCTTCTC 59 NA Mus musculus 50 Nme6 ENSMUSG00000032478 ENSMUST00000035053 3 1 1 90 9 109742207 109743990 TTTACCGAGAGCATGAAGG 59 109744455 109744473 TTGTGGGCAAGGATATAGG 58 NA DesignNoJunction Mus musculus 50 Mobp ENSMUSG00000032517 ENSMUST00000093773,ENSMUST00000111627 2 2 5 88 9 120077050 120077068 AGTACAGCATCTGCAAGAG 59 120077118 120082278 CCTCCTCAATCTAGTCTTCTG 59 NA Mus musculus 50 Mst1 ENSMUSG00000032591 ENSMUST00000035211 2 1 1 80 9 107986716 107986832 GAATCCATCGGTACAAGCA 59 107986875 107986894 CTTCGTGTTACATTCCTGGT 59 NA Mus musculus 50 Usp37 ENSMUSG00000033364 ENSMUST00000044260,ENSMUST00000055335 3 2 2 80 1 74524669 74524689 GTCATCCTCATTCTATGGGAG 59 74521707 74524628 GAAACATTACACCTGTCCAG 58 NA Mus musculus 50 Armcx1 ENSMUSG00000033460 ENSMUST00000113201,ENSMUST00000051256,ENSMUST00000113199,ENSMUST00000035748,ENSMUST00000113198,ENSMUST00000113197 1 6 6 80 X 131254195 131254213 ACTTCTTGGATCTCTGAGG 57 131254257 131254583 TACAGTGATACCCTTGCAG 58 NA InUTR Mus musculus 50 Scn11a ENSMUSG00000034115 ENSMUST00000070617 3 1 1 80 9 119688075 119688093 AAATCGTGAAGCATAGCTG 58 119683549 119688033 CATCTTCGAATATCAGTGCTC 58 NA Mus musculus 50 2310014H01Rik ENSMUSG00000034595 ENSMUST00000113814 3 1 2 99 17 36010873 36011748 CCCTAATCGTGGATGAGTC 59 36011811 36011829 CAGACTCCAGAAGCTTCAG 59 NA InUTR Mus musculus 50 Ssh3 ENSMUSG00000034616 ENSMUST00000113852,ENSMUST00000037992 2 2 2 80 19 4265414 4265622 CACTTCTAAAGAGATCCGTC 57 4265353 4265372 TGGTTGTCAATAAAGTCACG 58 NA Mus musculus 50 Txndc13 ENSMUSG00000034723 ENSMUST00000038228,ENSMUST00000110120,ENSMUST00000110119 2 3 3 75 2 134465556 134469578 TTTATGCTCCATGGTGTCC 59 134465499 134465518 AGTGTTTCTCCATTCTTTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Plvap ENSMUSG00000034845 ENSMUST00000048452 1 1 1 93 8 74032427 74032445 CTATAATCGCTTCATCGCC 58 74032196 74032370 GAAGAGTAAAGCTTCGCAG 58 NA Nonspecific Mus musculus 50 Filip1 ENSMUSG00000034898 ENSMUST00000093811 3 1 1 151 9 79665824 79665842 GAGAAGGAGGTTTCTACGG 59 79663691 79665709 CCATCTTGTCCTGACACTG 59 NA Mus musculus 50 Lsm7 ENSMUSG00000035215 ENSMUST00000035775 2 1 1 80 10 80316549 80316567 TATCCTGAAGGGCTTTGAC 58 80315830 80316505 TACTGGTCATCAGGGTCTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 1600002K03Rik ENSMUSG00000035595 ENSMUST00000041882 1 1 1 80 10 79637006 79637024 CATGAAGAGATGGCCTCTC 59 79637065 79637577 ATCTCCATCTCAACATCATCTC 59 NA InUTR Mus musculus 50 Dync1li2 ENSMUSG00000035770 ENSMUST00000041769 2 1 1 111 8 106952078 106953329 GATTCTGCCTCCAGTATGG 59 106951985 106952004 GTAAAGTGGAAGCCATAGGT 59 NA Mus musculus 50 1700066J24Rik ENSMUSG00000036162 ENSMUST00000038960 1 1 1 154 4 41464639 41464657 GAGGGACATGTGTATCCAG 59 41465560 41465578 CTCACATGTCACTCTCCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 Agr3 ENSMUSG00000036231 ENSMUST00000042101 1 1 1 80 12 36674428 36674859 GATCATGTTTGTTGACCCT 57 36674901 36674921 GGTTCATACGTGTATAGTCTG 57 NA Mus musculus 50 Glt6d1 ENSMUSG00000036401 ENSMUST00000038010 1 1 1 80 2 25650709 25650729 GGTCCTGGAGACATATTTCAG 59 25650232 25650667 TACTTGTCAGTGAGACTGC 58 NA Mus musculus 50 Spg20 ENSMUSG00000036580 ENSMUST00000044116,ENSMUST00000107971 1 2 2 82 3 54932289 54932432 GTGTTCAAGGATTCTCAACTG 59 54932476 54932494 TACAGTTTCTGCAGACACG 59 NA Mus musculus 50 Cab39 ENSMUSG00000036707 ENSMUST00000113360,ENSMUST00000113363,ENSMUST00000097666,ENSMUST00000082149 2 4 4 81 1 87744924 87744944 CTCAAGCTAATGATGAACCTC 58 87744987 87745617 CCACAAACACCTTGAACAC 59 NA Mus musculus 50 Grhl3 ENSMUSG00000037188 ENSMUST00000105855 2 1 1 60 4 135105177 135105196 CCTCTTCCTTCTAAACAAGC 58 135104396 135105156 TCCTCACATACAACAGAACTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 1700055N04Rik ENSMUSG00000037263 ENSMUST00000025794 3 1 1 150 19 3966015 3968456 CATTGGTCATCAAACAGGTG 59 3969790 3969808 GTGTCAAAGGAGAACTTGC 58 NA DesignNoJunction Mus musculus 50 Icam1 ENSMUSG00000037405 ENSMUST00000086399 3 1 1 84 9 20832050 20832068 TGAATGGTACATACGTGTG 57 20832116 20832224 TGAGAGTGGTACAGTACTG 57 NA Mus musculus 50 Cib2 ENSMUSG00000037493 ENSMUST00000041901 3 1 1 93 9 54393878 54396147 GATCTATGACTTCAACACTGAC 58 54393806 54393825 CTCATCCTCTTCCAACTCAG 59 NA Mus musculus 50 Vash2 ENSMUSG00000037568 ENSMUST00000047409 2 1 1 84 1 192794337 192794355 TCCCAAACTACAGGTTGTC 59 192790853 192794291 GTGTGGTTGTATTGTAGAGTC 58 NA Mus musculus 50 1700018B24Rik ENSMUSG00000037910 ENSMUST00000036023 1 1 1 60 3 48412866 48412886 TGTAAGATGTACGAAGAGCAC 59 48412826 48412844 CATAGGTGATGGACTTGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 2010209O12Rik ENSMUSG00000038181 ENSMUST00000088295 3 1 2 93 5 24099158 24099440 TCATGGATCTACAGCTCTG 58 24099497 24099515 GATGAGTAGCTTCCTCCTG 58 NA InUTR Mus musculus 50 Scaf1 ENSMUSG00000038406 ENSMUST00000085383 2 1 1 84 7 52258990 52260787 GGACACTGACAAGTACCTG 59 52258924 52258943 CTGGTAGTATGGCTTGATGG 59 NA Mus musculus 50 Tbkbp1 ENSMUSG00000038517 ENSMUST00000107614,ENSMUST00000066078,ENSMUST00000107613 2 3 5 85 11 97010733 97010751 CATCAAGGAAAGGCTAGGA 58 97010372 97010684 TCAGCGGATACTTGATCTC 58 NA Mus musculus 50 Sct ENSMUSG00000038580 ENSMUST00000046156 2 1 1 105 7 148464522 148464540 GAACACTCAGACCCTACAG 59 148464339 148464357 CTCTGAACGATCAACAGCA 59 NA DesignNoJunction Mus musculus 50 Dock10 ENSMUSG00000038608 ENSMUST00000077946,ENSMUST00000097681,ENSMUST00000057520 1 3 3 80 1 80575270 80581578 GCAGTGAGATCTGTATTTAAGG 58 80575211 80575231 GCTTTCTTGTCTATACAGTGG 58 NA Mus musculus 50 Bmp6 ENSMUSG00000039004 ENSMUST00000036105 1 1 1 80 13 38590628 38590646 GATGGAGAGTGTTCCTTCC 59 38590690 38590799 CATAAGGTGGACCAAGGTC 59 NA Mus musculus 50 Timm8b ENSMUSG00000039016 ENSMUST00000044051 3 1 1 81 9 50413147 50413165 ACACTACTCTTGCCATCAC 59 50413207 50413228 CTTCTGTCATTCTAAGGTATGG 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Sec24d ENSMUSG00000039234 ENSMUST00000047923 1 1 1 80 3 123065630 123067746 TACTCAATGAAGCTCATCGT 58 123067789 123067807 CCCTTTATCTTCCACCAGG 59 NA Mus musculus 50 Htatip2 ENSMUSG00000039745 ENSMUST00000085272 1 1 1 103 7 57015077 57015095 GAAATCCTGGGACAGAACC 59 57015161 57017446 TCCACCACTTCTTGATTCAC 59 NA Mus musculus 50 Cpeb2 ENSMUSG00000039782 ENSMUST00000114065,ENSMUST00000051378 1 2 2 83 5 43629643 43635830 CAGAATAGACCAGGATCGA 57 43635874 43635895 GCTCTCATGATATCAATAAGGG 58 NA Mus musculus 50 Pak7 ENSMUSG00000039913 ENSMUST00000077200,ENSMUST00000035264 1 2 2 80 2 135923320 135924020 CATACCAGAATGAATGAAGAGC 59 135923261 135923281 TCCTTGGTTATGAAGGTAGGA 59 NA Mus musculus 50 Tph1 ENSMUSG00000040046 ENSMUST00000107669,ENSMUST00000049298 3 2 2 80 7 53920594 53920612 AGTGACTCTCATCTTCTCC 57 53917547 53920550 CTCACATGATTCTCCTGGA 58 NA Mus musculus 50 BC021395 ENSMUSG00000040446 ENSMUST00000046206 2 1 1 80 18 24666540 24666559 AGCAAATAAAGGTGGATGAG 57 24665717 24666497 TAACAAGGTCGAGAGTCTG 58 NA Mus musculus 50 A330021E22Rik ENSMUSG00000040473 ENSMUST00000054865,ENSMUST00000061008 2 2 2 80 5 5617213 5617231 AGTATATGTCATGCCACGG 59 5613833 5617172 CATGAATGAAGTAGGAATCCTC 58 NA Mus musculus 50 Pkp2 ENSMUSG00000041957 ENSMUST00000039408 2 1 1 80 16 16247128 16260428 ATGCCTAAGGAACATGAGC 59 16260471 16260490 ACCAATGAGTCAATGAGACC 59 NA Mus musculus 50 1700120B06Rik ENSMUSG00000042269 ENSMUST00000048786 2 1 1 81 8 122693650 122693668 TTCTACCCTCCACCTAGTG 59 122692507 122693607 AAAGTCAGAGAAGATTCTCCG 59 NA Mus musculus 50 Stab1 ENSMUSG00000042286 ENSMUST00000036618 2 1 1 82 14 31967865 31967884 TTGAAGGTAATGGCTTCTCC 59 31967677 31967820 ACATTCAGCGTTCTCTGAG 59 NA Mus musculus 50 Id1 ENSMUSG00000042745 ENSMUST00000109824,ENSMUST00000038368 2 2 2 283 2 152562067 152562085 TCTCAGGATCATGAAGGTC 58 152562332 152562350 TTACATGCTGCAGGATCTC 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Gpr153 ENSMUSG00000042804 ENSMUST00000105650,ENSMUST00000105651,ENSMUST00000055754 2 3 3 81 4 151656056 151656488 ATTCTGACAATGAGACCAGTC 59 151656528 151656549 CCTCCATAGCTATAGTCAAGAG 58 NA Mus musculus 50 Synpo ENSMUSG00000043079 ENSMUST00000097566,ENSMUST00000031639,ENSMUST00000115318 2 3 3 60 18 60763353 60763373 GCATTCTCTTGATTGACAAGG 59 60763313 60763331 TCTCTAGAGAAGGTGCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 3222402P14Rik ENSMUSG00000043154 ENSMUST00000075941,ENSMUST00000066657 1 2 3 90 9 101113531 101113549 CTCCATCAGTCTGTAGGAG 58 101108621 101113477 ATCTTGATCACTTCTGGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG433365 ENSMUSG00000043282 ENSMUST00000055314 2 1 1 60 1 155721755 155721773 GGCTGAAGATAGTGACTGG 59 155721796 155721815 CCATCATCAAGACAGAAGAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 6530409C15Rik ENSMUSG00000043340 ENSMUST00000060288 3 1 1 63 6 28167696 28167714 TTCTCAGACAGTAACAGCA 58 28167740 28167759 CTAGATGCTCCTTCTCAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pcdhb14 ENSMUSG00000044043 ENSMUST00000052387 3 1 1 60 18 37608663 37608681 TCCTTTCCTCTTGAAACCT 58 37608704 37608723 CAGTGCTCTTTCAGTTACCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rsbn1 ENSMUSG00000044098 ENSMUST00000068879,ENSMUST00000051139,ENSMUST00000106806 3 3 3 82 3 103732939 103757569 CATACTCAGGTCAACAGGA 58 103757615 103757633 TCTACTGCTCCAACAAGAC 58 NA Mus musculus 50 Dnajc21 ENSMUSG00000044224 ENSMUST00000080845 2 1 2 60 15 10391998 10392017 CACGGTTACCTGTTATTCTG 58 10391733 10391752 ACGATACACTGCATAGAACC 59 NA DesignNoJunction Mus musculus 50 9030625A04Rik ENSMUSG00000044350 ENSMUST00000062789 3 1 1 83 14 77433147 77433819 GAATAAAGACTGATCACGCC 58 77433083 77433101 TCTGATTTGTGACGATCCC 59 NA Mus musculus 50 9830102E05Rik ENSMUSG00000044378 ENSMUST00000050132 2 1 1 96 6 137991968 137991987 GAACTCCAAGAGGAAGACAC 59 137985593 137991909 CTGAAGGAATCTGCAGGAG 59 NA Mus musculus 50 2310057J16Rik ENSMUSG00000044433 ENSMUST00000057028,ENSMUST00000111066 2 2 2 86 8 3598912 3598931 AGAAGACAGAACAAGAAGCA 59 3598980 3600685 GATATCGAATCGAGGGCTG 59 NA Mus musculus 50 Znrf4 ENSMUSG00000044526 ENSMUST00000052211 3 1 1 283 17 56651621 56651640 TTAACTTGAGCTCTGTGGAC 59 56651357 56651375 CTCCAAGTCCTCAAACTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dnd1 ENSMUSG00000044595 ENSMUST00000061522,ENSMUST00000089458 1 2 2 135 18 36924133 36924759 CTGGTAGAAGGTCAGTCAC 59 36924016 36924034 TTAGTTGGCTGACATCTGG 59 NA Nonspecific Mus musculus 50 Olfr124 ENSMUSG00000044985 ENSMUST00000053599 3 1 1 60 17 37942285 37942303 ACCTTTCTCTTCTGGACCT 59 37942327 37942345 AGGTTGACCAACATCTGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 E130308A19Rik ENSMUSG00000045071 ENSMUST00000070150 3 1 2 132 4 59704088 59704106 TCTCATCATGTGAGGTAGC 58 59704200 59750443 GTAGAATAAGCTGGAATGCAC 59 NA Mus musculus 50 Med26 ENSMUSG00000045248 ENSMUST00000058534 2 1 1 73 8 75021450 75021468 TGATCTCCAGTCTGGAGAG 59 75020979 75020998 ATTGATGAGCTTCCCTAGTC 58 NA DesignNoJunction Mus musculus 50 Sys1 ENSMUSG00000045503 ENSMUST00000109352,ENSMUST00000072452,ENSMUST00000054527 1 3 3 93 2 164288836 164288854 AATGATGTCCTTCGTCCTC 59 164289900 164289918 AGTGACAGTGAAATCCAGG 59 NA DesignNoJunction Mus musculus 50 Cradd ENSMUSG00000045867 ENSMUST00000099334 2 1 3 241 10 94785268 94785287 GGAATTTCCCTGGGTAAGAG 59 94773685 94773704 TAACCATGACAGGTGTTGAG 59 NA DesignNoJunction Mus musculus 50 Olfr1461 ENSMUSG00000045883 ENSMUST00000053772 3 1 1 60 19 13239722 13239741 TGTTACTCTTCAGCTGTCAC 59 13239761 13239782 TGAACTTGTCTCCTATTAGCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 She ENSMUSG00000046280 ENSMUST00000050401,ENSMUST00000107401 3 2 2 99 3 89653512 89653530 TACCAGAGGAGGATGATCG 59 89653593 89655546 GATCCCTCAAACTGGACTG 59 NA Mus musculus 50 Unc119b ENSMUSG00000046562 ENSMUST00000060798 1 1 1 81 5 115577412 115580483 CATCTCAGACCAAGACCAG 59 115577349 115577369 GAACTGATATCGAACGAAACG 59 NA Mus musculus 50 9330128J19Rik ENSMUSG00000047117 ENSMUST00000055607 3 1 1 80 13 97203349 97205839 CAGCAGAAGGAATCTAAGG 57 97203287 97203305 ACTTAGTAAGCTGTTCACG 57 NA Mus musculus 50 9930021J03Rik ENSMUSG00000048936 ENSMUST00000061906 3 1 1 115 19 29879821 29879839 CACTGGATCTCCAAACAGG 59 29879724 29879742 GTGTTTGTGTCGGTTTGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr812 ENSMUSG00000049052 ENSMUST00000057775 2 1 1 60 10 129279776 129279795 TTGTATTCCTACTAGGGTCC 57 129279735 129279753 TAGCGATCATAGGACATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp644 ENSMUSG00000049606 ENSMUST00000112696,ENSMUST00000045466,ENSMUST00000112698,ENSMUST00000086790 3 4 6 80 5 107063895 107063914 TCCATTAAACGAAGACAGTC 57 107048646 107063852 TGCTTACAATCTATGGCTG 57 NA Mus musculus 50 Prss33 ENSMUSG00000049620 ENSMUST00000115444 1 1 2 216 17 23972277 23972295 TTTAGTCCCTTACCTGCTC 58 23971835 23971982 TCTAGGGAAACAGTGACCT 59 NA DesignNoJunction Mus musculus 50 V1ri8 ENSMUSG00000049669 ENSMUST00000054679 1 1 1 109 13 22237309 22237328 TGCACTTACACAATACACTG 58 22237219 22237239 GCTAAAGCTAGGAATAACCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr714 ENSMUSG00000049674 ENSMUST00000054629 3 1 1 66 7 114218099 114218117 CTATGTGTCGTTAAGCCTC 57 114218146 114218165 CAATTTCTTGCTTTCAGGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Armcx4 ENSMUSG00000049804 ENSMUST00000055842 2 1 1 127 X 131229126 131229258 CTAAAGGGTCTAGGCTTGG 59 131229349 131229367 CACAGCTTGAACCTCTACC 59 NA Mus musculus 50 Pgrmc2 ENSMUSG00000049940 ENSMUST00000058578 2 1 1 87 3 40874211 40874229 GTTCGAGAATGGGAAATGC 59 40872587 40872605 CTGTGTACTCTGATGGCTC 59 NA DesignNoJunction Mus musculus 50 Spink8 ENSMUSG00000050074 ENSMUST00000055821 1 1 1 80 9 109723139 109723158 GGTCAGTGAGCCTATATGTG 59 109723198 109727031 TCTTCATATAGAATTCCGGAGC 59 NA Mus musculus 50 Hoxc12 ENSMUSG00000050328 ENSMUST00000055562 2 1 1 60 15 102768759 102768777 GTATTCGAAGTTGCAGCTG 59 102768801 102768819 TGTGATGAACTCGTTGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hs3st1 ENSMUSG00000051022 ENSMUST00000053116 3 1 1 60 5 40005822 40005841 CAGAAGGTCGAAAGATTCCT 59 40005781 40005800 TAAAGTAGAAGTTCGAGGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ttn ENSMUSG00000051747 ENSMUST00000099981,ENSMUST00000011934,ENSMUST00000111882,ENSMUST00000111865,ENSMUST00000099980,ENSMUST00000045194,ENSMUST00000045009 3 7 14 119 2 76813059 76813077 CTACAGCTTACTGATTGCC 57 76812484 76812976 ACTTCTTCACCTTGAACCA 58 NA Mus musculus 50 F730043M19Rik ENSMUSG00000052125 ENSMUST00000063828 3 1 2 186 12 33825980 33832013 ATAACTCCGAGAAACCGAG 58 33824643 33825831 TGGGTCATAATGGCTATGTC 59 NA InUTR Mus musculus 50 Mpp3 ENSMUSG00000052373 ENSMUST00000107168,ENSMUST00000100400,ENSMUST00000062801 3 3 4 86 11 101862033 101863346 TCTTCACTTGATGAACAGCA 59 101861966 101861984 GAGCACAGTGTCTATCAGG 59 NA Mus musculus 50 Rnase9 ENSMUSG00000052382 ENSMUST00000064214 2 1 1 60 14 51658795 51658815 GAAGCATGAATCTAATCGAGG 58 51658755 51658773 TTTGTCATTTGCTGTCCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rexo4 ENSMUSG00000052406 ENSMUST00000064244,ENSMUST00000114020,ENSMUST00000114019 1 3 3 159 2 26818032 26818050 TACCTCCCACAGATACCTC 59 26816249 26817909 CAGATGTCTTCCTCAGTGG 59 NA Mus musculus 50 F730035P03Rik ENSMUSG00000053360 ENSMUST00000065741 1 1 1 60 7 106928876 106928894 GGGAAACAGGAACAAACAG 58 106928834 106928853 TCTGACACGATCTTTAGGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Hs6st3 ENSMUSG00000053465 ENSMUST00000065904 2 1 2 60 14 119538298 119538318 TCATGGAGAAGAAGGATTGTC 59 119538337 120268125 GTGATGTAGTAGAAATTCCTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000053666 ENSMUSG00000053666 ENSMUST00000066239 2 1 1 81 9 107466234 107468864 GGGAAGTCAGACACTATTCTC 59 107466173 107466193 CTAAGGGAAGATGACCTTCTG 59 NA InUTR Mus musculus 50 Dpep2 ENSMUSG00000053687 ENSMUST00000081998,ENSMUST00000034373 2 2 2 84 8 108513909 108514506 CTTATAGATGGCCACAATGAC 58 108513845 108513864 TGAAGTTTCTCAGGTTAGCA 58 NA Mus musculus 50 Krt15 ENSMUSG00000054146 ENSMUST00000107411,ENSMUST00000007273 3 2 2 87 11 99994818 99994952 TTCAGTAAGACTGAAGAGCT 57 99994750 99994768 GTCTCAGGTCTGTGATCTC 58 NA Mus musculus 50 Arfgap3 ENSMUSG00000054277 ENSMUST00000067215 2 1 1 102 15 83167146 83173459 TTTATTCGGTCCACAGAGC 59 83165018 83165036 CATGTTGGTGGAAGAAGGA 59 NA Mus musculus 50 AU018091 ENSMUSG00000054753 ENSMUST00000067969 1 1 1 80 7 3156369 3157917 CTCCACTTCAAGGTTCCAG 59 3156307 3156326 AGTCATTTGCATCATCAGGT 59 NA Mus musculus 50 Sec14l3 ENSMUSG00000054986 ENSMUST00000068322 2 1 1 85 11 3974819 3975179 GTTTAACCAAGATCAACTACGG 59 3975225 3975243 CACTGAGTGCTCATACTGG 59 NA Mus musculus 50 A230083G16Rik ENSMUSG00000055818 ENSMUST00000069553 3 1 1 203 6 124867006 124867024 GGAAATCGGTAGTAGAGGA 57 124867191 124875200 AGAATGACCCTTTCCTCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 1700008P20Rik ENSMUSG00000055826 ENSMUST00000069562 2 1 1 63 7 25118560 25118578 AGTCTCAACAAAGAGGAGG 58 25118515 25118533 ACATGTTGAAGAGGAACCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tas2r135 ENSMUSG00000056203 ENSMUST00000070178 2 1 1 60 6 42355836 42355857 GCTCCTAAATTTAATGTGGGAC 59 42355878 42355896 TAGCAAAGAACAGAGCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1322 ENSMUSG00000056281 ENSMUST00000070304 1 1 1 60 X 47239373 47239392 TTCCTAGAGATCAGCTACAC 57 47239332 47239350 CCGATAACAATGTCCACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Acbd4 ENSMUSG00000056938 ENSMUST00000107040,ENSMUST00000074474,ENSMUST00000092558 2 3 6 134 11 102964949 102965415 CCTAAGAATGGGATGCCTG 59 102965773 102965791 AAACATATCCTCTGCCACC 59 NA DesignNoJunction Mus musculus 50 Uxs1 ENSMUSG00000057363 ENSMUST00000076997 2 1 1 81 1 43821850 43828539 CCTACATGAAGCAGGAAGG 59 43821787 43821807 CCATCATTCATGTGCATTCTC 59 NA Mus musculus 50 Mmel1 ENSMUSG00000058183 ENSMUST00000080559,ENSMUST00000079269,ENSMUST00000105635,ENSMUST00000105634 1 4 4 80 4 154266120 154266529 ATGAGGAATACTCCAGTTTGAC 59 154266570 154266588 TCTGGGCATTGTTCTTGAG 59 NA Mus musculus 50 Mia1 ENSMUSG00000058217 ENSMUST00000071986 2 1 1 112 7 27965269 27965287 TTACTATGGAGACCTGGCA 59 27964841 27965193 AGAAATCCCATTGATCGGT 58 NA Mus musculus 50 Hist1h1b ENSMUSG00000058773 ENSMUST00000080511 1 1 1 60 13 21871947 21871965 AAAGAAAGCGAAGAAGCCT 59 21871905 21871923 CTTCTTAGGACTCTTGGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Deaf1 ENSMUSG00000058886 ENSMUST00000080553,ENSMUST00000084440,ENSMUST00000097951 2 3 3 91 7 148500883 148507023 GATGACATGACTCTGAGTGG 59 148500811 148500829 TTCTTCACTGGAGTTGTGG 59 NA Mus musculus 50 Krt40 ENSMUSG00000059169 ENSMUST00000107443,ENSMUST00000074253 1 2 2 80 11 99401432 99401451 GATGTCAATACGAGAGGGTG 59 99401296 99401389 GGTTCAGCTCTTCTGTCTG 59 NA Mus musculus 50 Zfp637 ENSMUSG00000059689 ENSMUST00000035638,ENSMUST00000112860 2 2 3 63 6 117793371 117793389 GACTGTCATGGAAGATACG 57 117795006 117795024 AGTCATGTAAGATGCACCA 58 NA DesignNoJunction Mus musculus 50 Olfr1385 ENSMUSG00000059729 ENSMUST00000071807 2 1 1 61 11 49308427 49308445 CACTACATGACCATCATGC 58 49308470 49308488 CCTACCCATGAAGCAAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 9430015G10Rik ENSMUSG00000059939 ENSMUST00000072554,ENSMUST00000105576 1 2 2 81 4 155498222 155499534 CAGTCTTCAGTGAGGAAGC 59 155499579 155499597 CTGTAGAGAAGGCAGAAGG 59 NA Mus musculus 50 H2-Q7 ENSMUSG00000060550 ENSMUST00000076256,ENSMUST00000071951 3 2 2 62 17 35576641 35576659 GAGCTACTACAACCAGAGC 59 35576872 35576890 ATGTCACAGCCATACATCC 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Suclg2 ENSMUSG00000061838 ENSMUST00000079847 3 1 1 82 6 95536982 95537000 GATAAAGGATAGCCAGGCC 59 95529214 95536936 TAATCTGATCTGCAGCCTG 59 NA Nonspecific Mus musculus 50 5730403M16Rik ENSMUSG00000062116 ENSMUST00000056246,ENSMUST00000068974 2 2 2 81 7 7069372 7069390 CAGGTGGAATCTTGTGGAG 59 7068897 7069328 CTTTGATCCAACAACCTGTC 59 NA Mus musculus 50 Olfr1465 ENSMUSG00000062199 ENSMUST00000080142 3 1 1 60 19 13388404 13388422 TATGATCGCTATGCAGCAG 59 13388362 13388380 CACCTGAAGTCATAGTGGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 Lba1 ENSMUSG00000062296 ENSMUST00000078626 2 1 1 81 9 111280412 111281319 CAGAGATGTACAAGCTCCTC 59 111281363 111281381 AAGATCCAAAGGTTGACCC 59 NA Mus musculus 50 Pvrl2 ENSMUSG00000062300 ENSMUST00000075447,ENSMUST00000108450 2 2 2 138 7 20318367 20318386 CTATCATCAGCCGATACTCC 59 20316063 20318266 GATACTTCTGGAGGGTAGC 58 NA Mus musculus 50 Zfp780b ENSMUSG00000063047 ENSMUST00000081618,ENSMUST00000080175 1 2 2 80 7 28756685 28756704 TACTAGAGCAGGAGAAAGAG 57 28749871 28756644 CATAATCTGTCTCCAAGTCTG 57 NA Nonspecific Mus musculus 50 Kif1b ENSMUSG00000063077 ENSMUST00000060537,ENSMUST00000055647,ENSMUST00000105694,ENSMUST00000030806 3 4 4 80 4 148632028 148632047 TCTGTGACCAGTATTCAGGA 59 148627849 148631986 CTTCTCTGACTCCTTCAGAC 59 NA Mus musculus 50 4921528I07Rik ENSMUSG00000064299 ENSMUST00000072612 2 1 1 80 9 114216912 114216930 AACTTCAGAAGAGGACGAG 58 114213805 114216185 AACGGAATCCTATGTCTGC 59 NA Mus musculus 50 Cyp2b19 ENSMUSG00000066704 ENSMUST00000077855 2 1 1 91 7 27551870 27551888 TTTACAGATCTTGCTCCGA 58 27551943 27552136 TACACCTCAGTGTTCTTGG 58 NA Mus musculus 50 Tuba3b ENSMUSG00000067338 ENSMUST00000087445 3 1 1 95 6 145568297 145568316 GTTCCCAAAGATGTCAATGC 59 145568371 145569619 AATACCCACCTTAAATCCAGTC 59 NA Nonspecific Mus musculus 50 Olfr1432 ENSMUSG00000067520 ENSMUST00000087819 2 1 1 62 19 12303547 12303565 GCTTTGTTCAAACAGTTGC 58 12303503 12303522 AATGACGAATGACATTTGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Hdac8 ENSMUSG00000067567 ENSMUST00000087916,ENSMUST00000113616 2 2 2 80 X 99693601 99695171 ATATGGACTAGGTTATGACTGC 59 99693542 99693560 GCTGTGATTGTACCTCCTC 59 NA Mus musculus 50 Nms ENSMUSG00000067604 ENSMUST00000088029 3 1 1 83 1 39003822 39004410 ACTTCCCTAAGAAGGATCCT 59 39005483 39005501 TGTTGTCGGTGTATCTTCC 59 NA Mus musculus 50 OTTMUSG00000015846 ENSMUSG00000068062 ENSMUST00000089083 3 1 1 189 2 152194535 152196557 AGGTTGATGCTCATACATCC 59 152199538 152199556 CTACAGTGCTGACTCATGG 59 NA DesignNoJunction, InUTR Mus musculus 50 Pnp2 ENSMUSG00000068417 ENSMUST00000095925 3 1 1 83 14 51583166 51583184 TATGCTGATCCGTGATCAC 59 51583231 51583362 ACTCCAAACCTTTCATCGT 59 NA Nonspecific Mus musculus 50 Aard ENSMUSG00000068522 ENSMUST00000090025 1 1 1 105 15 51876474 51876492 GATGAATTCCGAGTGTGGA 59 51876561 51876579 AATGCTAGGAGGGTTTCAG 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Iigp2 ENSMUSG00000069874 ENSMUST00000094169,ENSMUST00000108836,ENSMUST00000058704 2 3 3 60 11 58033254 58033273 GAAGAGAAAGATTCAGCTCC 57 58033295 58033314 AGTAACAGGTTGGTTTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:1926064 ENSMUSG00000070034 ENSMUST00000093508 1 1 2 137 1 87481623 87482803 AGATGAGATGATGGGAGTG 58 87481504 87481522 CTCATCCTTGTTCTCTGTG 57 NA Mus musculus 50 NP_001074731.1 ENSMUSG00000070471 ENSMUST00000041115 3 1 1 81 3 58427144 58427162 CTCAGAATTCCATCACCCA 58 58426390 58427099 TTAAGCCAAGATGGGAAGG 59 NA Mus musculus 50 Rnf186 ENSMUSG00000070661 ENSMUST00000116094,ENSMUST00000094576 2 2 2 62 4 138523647 138523665 ACAGGACACTGTAAGTGTC 58 138523691 138523709 AACAAGAGCAAGTGTACAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Runx3 ENSMUSG00000070691 ENSMUST00000056977 2 1 1 84 4 134711292 134711310 TGTCATGAAGAACCAAGTG 57 134719150 134719168 GATTGTGAGCGTGAAACTC 59 NA DesignNoJunction Mus musculus 50 Olfr1113 ENSMUSG00000070857 ENSMUST00000079966 2 1 1 60 2 87053396 87053416 ATGTGTCTATTCCTGATCCTG 58 87053438 87053456 CATAGGACATCACAGCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Serpina1b ENSMUSG00000071178 ENSMUST00000095450 3 1 1 60 12 104967577 104968463 GAAGGTTAGTCCAGATCCA 57 104967535 104967556 GTCTTCAAGTTATAGTCTCCAG 57 NA DesignNoJunction Mus musculus 50 Mcptl ENSMUSG00000071361 ENSMUST00000095798 2 1 1 150 14 56645865 56646290 TATACATGGGAGACTCTGGA 58 56645734 56645752 TACTCGCCCTTTATGACTC 58 NA Mus musculus 50 Stxbp3b ENSMUSG00000071640 ENSMUST00000090527 2 1 1 77 19 9632274 9632292 TGCATGAACTTGAAAGACC 58 9632215 9632233 CTCAGTGTCTTCTTGGGTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 EG544974 ENSMUSG00000072100 ENSMUST00000096852 1 1 1 101 X 151322271 151324674 GTTCTCAAGTATTCACTGCC 58 151322189 151322207 ATATGCAGCAAAGTAGCCA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ssh2 ENSMUSG00000072682 ENSMUST00000068342 1 1 1 135 11 77272405 77272424 GTAAAGATGTTCTGTGGGAG 57 77272521 77272540 TCCACAGATAGTTGTTTGGA 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Adam4 ENSMUSG00000072972 ENSMUST00000085319 2 1 1 60 12 82522019 82522037 TGGAATACGAAGAACCTGC 59 82521977 82521995 CACTCCAAGGATCAAGGTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Adam4 ENSMUSG00000072972 ENSMUST00000085319 3 1 1 60 12 82522013 82522033 ATACGAAGAACCTGCATACTG 59 82521973 82521993 ATAACACTCCAAGGATCAAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Vamp5 ENSMUSG00000073002 ENSMUST00000101285 2 1 1 130 6 72319296 72319316 GGGACAGTAGTAAACCATAGG 59 72319186 72319204 AAACACCAGGATTCTCTGG 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 ENSMUSG00000073519 ENSMUSG00000073519 ENSMUST00000097503 3 1 1 88 18 82862482 82862500 CAACCCTCTTAGTCCTCAC 58 82862552 82862570 TGCATAAACGTAGCGAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Wnt4 ENSMUSG00000073745 ENSMUST00000097840 1 1 1 103 4 136853940 136853958 AGGTAATGATGCCTGTCAG 59 136854023 136854043 TGCCTTTAGTTATAGCCAGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm829 ENSMUSG00000073860 ENSMUST00000098094 2 1 1 242 4 45731497 45731515 AATGGAGAGCAAAGCTGAG 59 45736026 45736044 TCTGAGTCTGACATCTCAC 58 NA DesignNoJunction, InUTR Mus musculus 50 ENSMUSG00000074555 ENSMUSG00000074555 ENSMUST00000099033 3 1 1 104 2 173951189 173951350 CCCATAAGGGTCAGTTTGG 59 173951103 173951121 AATACCACCTCTAAGCGTG 59 NA Mus musculus 50 Tox2 ENSMUSG00000074607 ENSMUST00000109427 2 1 3 84 2 163030515 163073518 GAGTTTGATGGTGACAGTG 58 163073566 163101720 CCTGGCTGTTATAGGTCTG 59 NA Mus musculus 50 AI606181 ENSMUSG00000074873 ENSMUST00000099454 3 1 1 60 19 41667886 41667906 CATTTAGCTTTGCTTCTCAGG 59 41667928 41667946 TCCATGATATCAAGGGTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1047 ENSMUSG00000075196 ENSMUST00000099901 3 1 1 60 2 86068954 86068972 ACTCCAAGCTACAAACACC 59 86068912 86068930 CCAAGATCTGTAATCGCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 OTTMUSG00000011393 ENSMUSG00000075520 ENSMUST00000100388 1 1 1 155 2 16049720 16049738 GAAGATGAATCCAGCTGTG 58 16063936 16072387 TATTGGACACTCTGAGCAG 58 NA Mus musculus 50 Cyp3a41a ENSMUSG00000075551 ENSMUST00000094111 2 1 1 60 5 146520170 146520460 ATGAAAGATGTGTTAGGTGC 58 146520129 146520147 TCACTCCAAATGATGTGCT 59 NA Nonspecific, DesignRelaxed Mus musculus 50 TRBV4 ENSMUSG00000076464 ENSMUST00000103265 2 1 1 71 6 41009485 41009603 GAATAGGCCCTTTGGAGAC 59 41009638 41009656 ACACTTCATTTCCCACCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRBV12-2 ENSMUSG00000076468 ENSMUST00000103269 3 1 1 137 6 41068929 41069076 CTCCTGGGAACAAGTTCAG 59 41069176 41069195 CTGAGTCTGTTGATACCAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV4-56 ENSMUSG00000076557 ENSMUST00000103358 1 1 1 60 6 69537553 69537571 ATTGTTCTCACCCAGTCTC 58 69537511 69537529 TTATGGTGACTTTCTGCCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1-31 ENSMUSG00000076702 ENSMUST00000103511 1 1 1 60 12 116067634 116067652 GAGCCATGGAAATATCCTC 57 116067592 116067612 GCTAGAAACACCATTGTAAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S6 ENSMUSG00000076722 ENSMUST00000103531 3 1 1 81 12 116597534 116597552 CTACTGGATGGATTGGGTG 59 116597471 116597490 AGTTTCACTATCAGAAGGGT 57 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV8D-1 ENSMUSG00000076770 ENSMUST00000103580 1 1 1 62 14 53398402 53398420 AGCAGAAGAGAATCTGTGG 58 53398446 53398464 CTACAATTCACCGTGACAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 TRAV12-3 ENSMUSG00000076845 ENSMUST00000103657 3 1 1 129 14 54241632 54241650 GAGATGGAGACTCAGTGAC 58 54241742 54241761 TTGAGATAGTGCACATACCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Cd80 ENSMUSG00000078095 ENSMUST00000104896 2 1 1 60 16 38494638 38494656 CAAACACGGTTCTCTAGGT 59 38494677 38494698 TTCATTCGTCTGAGTACTTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 A2AMT6_MOUSE ENSMUSG00000078367 ENSMUST00000105160 1 1 1 60 4 3099911 3099929 GTCTACCCTGAAGACAGAG 58 3099953 3099971 AGATGACAAATGTGCACAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Dnahc3 ENSMUSG00000078596 ENSMUST00000106515 1 1 1 80 7 127105828 127108990 TTTGCATCTTCACAAGTGG 58 127105766 127105784 TGTATCCTCAGAGGTTTGG 58 NA Mus musculus 50 1700094D03Rik ENSMUSG00000078667 ENSMUST00000029551 2 1 1 85 3 89868462 89869435 AAACAGCTACTAGTGGTCC 58 89869484 89869502 ATCTGATTGAGTTCCTGCT 58 NA Mus musculus 50 NP_001092800.1 ENSMUSG00000078752 ENSMUST00000108083 3 1 1 100 7 34884814 34884834 AATAATGACCCTCTCGTACTG 59 34884895 34885699 TTGATGAAATTGGTTGCCTG 59 NA DesignNoJunction Mus musculus 50 NP_001070147.1 ENSMUSG00000078783 ENSMUST00000108361 3 1 1 80 3 15320457 15320478 CTTGAGAACATACTCTGAAGAG 57 15296646 15320416 TCTGTTGTCTTCTGTTCAC 57 NA Mus musculus 50 A2ARV8_MOUSE ENSMUSG00000078872 ENSMUST00000108970,ENSMUST00000108969,ENSMUST00000108968 1 3 3 80 2 176869009 176869028 ATCCTTCTCAGAAGAGTCTC 57 176869068 176869295 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 3100002L24Rik ENSMUSG00000078903 ENSMUST00000109061,ENSMUST00000109060,ENSMUST00000099029,ENSMUST00000109059,ENSMUST00000099028,ENSMUST00000109058,ENSMUST00000109056,ENSMUST00000109055 1 8 10 80 2 174958743 174958762 ATCCTTCTCAGAAGAGTCTC 57 174958476 174958703 CTTCCCAAATGTAACCTATAGC 58 NA Nonspecific Mus musculus 50 1700110I01Rik ENSMUSG00000079404 ENSMUST00000112807 2 1 1 60 14 3618225 3618243 GAAGCTGGTCCATAAAGTG 58 3618266 3648896 GGAAGATCAATGCTACTTGG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Seh1l ENSMUSG00000079614 ENSMUST00000116622,ENSMUST00000025421 1 2 2 80 18 67946842 67946860 GAAGTGATGATAGCAGTCC 57 67946904 67948359 CTTTCGCATATTTCCTGGT 57 NA Mus musculus 50 3110001I22Rik ENSMUSG00000079737 ENSMUST00000035426 2 1 1 60 16 13677853 13677871 GCCGTAAAGCAATAGTGTC 58 13677895 13677913 TCACAGTCTTGGTAGTAGG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Exosc6 ENSMUSG00000080049 ENSMUST00000116163 1 1 1 60 8 113581286 113581304 AGAGATTTGAAAGCAGCCA 59 113581327 113581346 TACTAGGTAAATCCAGCCCA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Znf512b ENSMUSG00000000823 ENSMUST00000108789,ENSMUST00000000840,ENSMUST00000108791 1 3 3 89 2 181323006 181323115 GAAGTATGTCACAAGTTGCAG 59 181322937 181322955 CATGGTGTGGTAGTTGAGG 59 NA Mus musculus 50 Mapk7 ENSMUSG00000001034 ENSMUST00000079080,ENSMUST00000108714,ENSMUST00000101085,ENSMUST00000116369,ENSMUST00000094119,ENSMUST00000101086 2 6 6 82 11 61306457 61306476 AAACACGACAATATCATCGC 58 61305177 61306414 AGTACCACATAGACAGATCTG 58 NA Mus musculus 50 Mapk7 ENSMUSG00000001034 ENSMUST00000079080,ENSMUST00000108714,ENSMUST00000101085,ENSMUST00000116369,ENSMUST00000094119,ENSMUST00000101086 2 6 6 82 11 61306457 61306476 AAACACGACAATATCATCGC 58 61305177 61306414 AGTACCACATAGACAGATCTG 58 NA InUTR Mus musculus 50 Agpat3 ENSMUSG00000001211 ENSMUST00000105388,ENSMUST00000105390,ENSMUST00000105389,ENSMUST00000001240,ENSMUST00000105387 1 5 5 184 10 77745985 77746944 AGTACATGTGGTTTCTCCTG 59 77745202 77745220 CACGTCATAGATAGCTGCA 59 NA Mus musculus 50 Def8 ENSMUSG00000001482 ENSMUST00000001522,ENSMUST00000065534,ENSMUST00000108832,ENSMUST00000108830,ENSMUST00000108833 3 5 6 96 8 125983742 125983760 GTGAACTCTGCAAAGAAGG 58 125983820 125985375 TAGTAACAGTCCCTGTGGA 59 NA Mus musculus 50 Kcnh6 ENSMUSG00000001901 ENSMUST00000106903,ENSMUST00000001965 2 2 3 80 11 105888984 105889004 TTCCTGAAACTTCAGTGACTC 59 105889046 105895109 CATAGCTTAGGGTCTGTGC 59 NA Mus musculus 50 Cugbp2 ENSMUSG00000002107 ENSMUST00000114923 2 1 5 153 2 6642498 6642516 TCTACCAGATCAACGTCCT 59 6585144 6585162 AAAGTAAACCGACTCACCC 59 NA DesignNoJunction Mus musculus 50 Nr1h3 ENSMUSG00000002108 ENSMUST00000111356,ENSMUST00000111354,ENSMUST00000111355,ENSMUST00000002177,ENSMUST00000111358 3 5 5 131 2 91032892 91033784 TGTTTCTCCTGATTCTGCA 58 91032779 91032797 CCTATCCCTAAAGCAACCC 59 NA Mus musculus 50 Golga2 ENSMUSG00000002546 ENSMUST00000113375 1 1 5 110 2 32152647 32152665 AGTCTGCGACAACTTTCTC 59 32153087 32154128 CTGTTGTTTCTCCAGTTCCT 59 NA Mus musculus 50 Sri ENSMUSG00000003161 ENSMUST00000088786,ENSMUST00000003245 3 2 2 81 5 8063338 8063358 ATCAGTTTCGATAGCGATAGG 59 8063400 8063648 TCAACCTGAATCCCATAGTC 58 NA Mus musculus 50 Cd44 ENSMUSG00000005087 ENSMUST00000005218,ENSMUST00000111200,ENSMUST00000111199,ENSMUST00000111198,ENSMUST00000111197,ENSMUST00000111196,ENSMUST00000060516,ENSMUST00000111195,ENSMUST00000111194,ENSMUST00000111192,ENSMUST00000111191,ENSMUST00000111190 3 12 15 81 2 102671533 102671552 TCTTTGGAGAAACTGAAGTG 57 102668752 102671489 GATGAGTCTCGATCTCCTG 58 NA Mus musculus 50 Sra1 ENSMUSG00000006050 ENSMUST00000006209 3 1 1 75 18 36827455 36827473 AAAGAAGAGGATGGCACTG 59 36827267 36827286 TGATCGGTGAATGTCATCTG 59 NA DesignNoJunction Mus musculus 50 Elovl1 ENSMUSG00000006390 ENSMUST00000006557,ENSMUST00000067896 3 2 3 133 4 118103503 118103681 TCTATGAGTTTCTGATGTCTGG 59 118103897 118103915 CTCAATGACCTTGGAAAGC 58 NA Mus musculus 50 Rpl10 ENSMUSG00000008682 ENSMUST00000008826,ENSMUST00000074085 2 2 2 60 X 71517009 71517028 TGTAAGAACAAGCCATACCC 59 71517051 71517150 GGATCTTAGCATCAGGGAC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 4631426E05Rik ENSMUSG00000013611 ENSMUST00000013755 2 1 2 124 15 36447392 36447411 CCTGAAGAAGATGATCTCAG 57 36435216 36437463 AATAGACTTTCTGGCTAGGT 57 NA Mus musculus 50 5930434B04Rik ENSMUSG00000015488 ENSMUST00000114007,ENSMUST00000114006,ENSMUST00000114004,ENSMUST00000015632,ENSMUST00000114005,ENSMUST00000114003 1 6 6 83 2 26869675 26871011 GTGTGGATGATCATGAACG 58 26871058 26871076 TACTGTGTTTGCAAACTCC 58 NA InUTR Mus musculus 50 Lcorl ENSMUSG00000015882 ENSMUST00000016026,ENSMUST00000113981,ENSMUST00000087164 1 3 5 108 5 46127044 46127063 GGGATGGAGTGTTAGATCTC 58 46125710 46126973 TTTCTGTGTAGTCTCCCAG 58 NA Mus musculus 50 Odz1 ENSMUSG00000016150 ENSMUST00000115058,ENSMUST00000115061 1 2 4 81 X 39995979 40010645 TTTGGAACTAAGCACAAGC 58 39995916 39995935 GGTGTCTGATAGGTAGAGTG 58 NA Mus musculus 50 Matn4 ENSMUSG00000016995 ENSMUST00000103104,ENSMUST00000109359,ENSMUST00000109358,ENSMUST00000103103,ENSMUST00000059332,ENSMUST00000109362,ENSMUST00000109361,ENSMUST00000109360 1 8 8 60 2 164218859 164218878 CTCTCAGGATGACATTTCAG 57 164218717 164218836 ATACATGACGATGCCTTCC 59 NA DesignRelaxed Mus musculus 50 Elmo2 ENSMUSG00000017670 ENSMUST00000074046 1 1 5 149 2 165134451 165134469 GTACCAGAAGATAGCGGAG 58 165129188 165130404 TTAAGGTGCTTGTCCTGTC 59 NA Mus musculus 50 Gdap1l1 ENSMUSG00000017943 ENSMUST00000018087,ENSMUST00000109421,ENSMUST00000109420 1 3 3 123 2 163276391 163277246 AAGCTTATGGCCAAGATCC 59 163277332 163277351 CCTCATTCTCCAGTTTCCTC 59 NA Mus musculus 50 Slc13a3 ENSMUSG00000018459 ENSMUST00000109279 2 1 2 107 2 165259615 165259633 GCTTCCTCATTTCCATTCC 58 165252623 165259544 TCCTCCAACTTCTCTTGAG 58 NA Mus musculus 50 Ncor1 ENSMUSG00000018501 ENSMUST00000018645,ENSMUST00000101067,ENSMUST00000101068 3 3 8 170 11 62190255 62192026 TAAACAGAAAGCTTCACGG 57 62187091 62187109 GGAGCACTTTCTGTATCAG 57 NA Mus musculus 50 Rgs17 ENSMUSG00000019775 ENSMUST00000064225,ENSMUST00000019909 3 2 2 62 10 4505248 4505269 TTCTATACTGTCACCGAAAGAG 59 4513422 4513440 CTCCTGTTGATCACCTCTC 59 NA DesignNoJunction Mus musculus 50 Egfr ENSMUSG00000020122 ENSMUST00000020329 1 1 3 80 11 16791294 16793019 AGTGTATAAGGGTCTCTGG 57 16793062 16793081 GATGTGGCTTCTCTTAACTC 57 NA Mus musculus 50 Nefh ENSMUSG00000020396 ENSMUST00000093369,ENSMUST00000020667 2 2 2 172 11 4845231 4845249 GGAGATAACTGAGTACCGG 58 4843942 4843960 TGTTTCTCAGCTCACTGTC 59 NA DesignNoJunction Mus musculus 50 Ggnbp2 ENSMUSG00000020530 ENSMUST00000100685 3 1 3 80 11 84667877 84671954 CTAAACCTCTGGGTGAAGG 59 84667815 84667834 TGTGGTCTTCACTACTTCTC 58 NA Nonspecific Mus musculus 50 Srebf1 ENSMUSG00000020538 ENSMUST00000108737,ENSMUST00000020846,ENSMUST00000064158 1 3 3 80 11 60016654 60016672 CTGGCAGAGATCTATGTGG 59 60016424 60016612 GAAGAAACGTGTCAAGAAGTG 59 NA Mus musculus 50 Itgb4 ENSMUSG00000020758 ENSMUST00000106461,ENSMUST00000068981,ENSMUST00000106458 1 3 5 146 11 115867069 115867780 CTTTCCTCCCAAGATTCCC 59 115867890 115867908 GTATTCCACACTGTAGCCC 59 NA Mus musculus 50 Mink1 ENSMUSG00000020827 ENSMUST00000072237,ENSMUST00000072873,ENSMUST00000079244 2 3 5 101 11 70422114 70422132 AAATCTATCTGCAGAGGCG 59 70422196 70422355 TGAGGTCAGGGTTACTAGAG 59 NA Mus musculus 50 Stx8 ENSMUSG00000020903 ENSMUST00000021285 2 1 3 80 11 67834434 67834452 TCCTCTATCATAAGTCGCC 57 67834494 67922792 GTCATCGATGATCTCATTCTG 58 NA Mus musculus 50 Exoc2 ENSMUSG00000021357 ENSMUST00000021785,ENSMUST00000102946 1 2 2 80 13 30956811 30959853 CAGTTTGACTTCAGAGCAG 58 30956749 30956768 GCTATGTTTAGGAAGGTGTG 58 NA Mus musculus 50 Kif13a ENSMUSG00000021375 ENSMUST00000056978,ENSMUST00000110121 2 2 2 80 13 46880665 46880684 CCTATCAGTATCCATTGGCT 58 46874352 46880622 AAGTCTTCTTCCTGGTAGC 58 NA Mus musculus 50 Mctp1 ENSMUSG00000021596 ENSMUST00000109583,ENSMUST00000109589,ENSMUST00000046098 3 3 5 87 13 76862963 76862982 CATTATCCTGACCATGACCT 58 76863032 76871041 TTAGCATTGTCACATCCCT 58 NA Mus musculus 50 Dusp13 ENSMUSG00000021768 ENSMUST00000022290 3 1 1 225 14 22561884 22561905 TTCTGAGGTTACAGCTAAAGAG 59 22554309 22554327 ATTAGACGACCCTTGTCTC 58 NA DesignNoJunction Mus musculus 50 Dlg5 ENSMUSG00000021782 ENSMUST00000090398,ENSMUST00000073687 1 2 3 80 14 24955894 24956363 CAAGCACATCAAGGAACAG 59 24955832 24955851 GTTTCGAATTGCTCTTTGGA 59 NA Mus musculus 50 Prkcd ENSMUSG00000021948 ENSMUST00000022521,ENSMUST00000112211,ENSMUST00000112210,ENSMUST00000112208,ENSMUST00000112207,ENSMUST00000112206 2 6 9 96 14 31409206 31411916 TAAGCCCAAAGTGAAATCC 57 31409128 31409146 GATGAGGTTCTTGTCACTG 57 NA Mus musculus 50 Hmbox1 ENSMUSG00000021972 ENSMUST00000067843 3 1 3 179 14 65444519 65445616 CAATATCGCAGCAATCCTG 59 65442456 65442474 AAGATAGTGTGGTTGACGG 59 NA Mus musculus 50 Tsc22d1 ENSMUSG00000022010 ENSMUST00000088906,ENSMUST00000048371,ENSMUST00000110887,ENSMUST00000100376,ENSMUST00000022587 1 5 5 82 14 76905093 76906230 GAGCAAGCTATGGATCTGG 59 76906275 76906294 TCTTTGATCTGCTCCTTCAG 59 NA Nonspecific Mus musculus 50 Dmc1 ENSMUSG00000022429 ENSMUST00000023065,ENSMUST00000080992 2 2 2 80 15 79399179 79414761 GAGCAACTATGACCTTTCAG 58 79399118 79399137 TTATTCTTGTTGTGGAAGCG 58 NA Mus musculus 50 D15Wsu75e ENSMUSG00000022472 ENSMUST00000023110,ENSMUST00000100399 2 2 3 113 15 81846365 81846383 AATCTCTATCCGGTGAAGC 58 81833025 81834190 AACTATAGAGGTGTGCCAG 58 NA Mus musculus 50 Gcet2 ENSMUSG00000022659 ENSMUST00000089499 3 1 2 162 16 45613195 45616074 ACATGCAGATACTTCAGGG 59 45619937 45619958 TGTAGGTCTCATTAGCATTGTC 59 NA Mus musculus 50 2610039C10Rik ENSMUSG00000022978 ENSMUST00000099554,ENSMUST00000023703 3 2 2 86 16 90720949 90720968 AATCGTGTCAGAAGACAAGG 59 90720207 90720901 GTCAGGACTTCTTCCATCTG 59 NA Mus musculus 50 Ache ENSMUSG00000023328 ENSMUST00000024099,ENSMUST00000085934 2 2 3 69 5 137733154 137733175 CGACTTATGAAATACTGGACCA 59 137734409 137734427 GAGATTTGGAGTCTCGAGG 59 NA DesignNoJunction Mus musculus 50 Strn ENSMUSG00000024077 ENSMUST00000024881,ENSMUST00000112483 3 2 2 90 17 79064129 79066477 CTCACTAGCTTATGATATAGCG 57 79064060 79064078 GATGCCATCAAAGTGACTC 58 NA Mus musculus 50 Qpct ENSMUSG00000024084 ENSMUST00000040789,ENSMUST00000112450 3 2 2 106 17 79476906 79476925 GATTCTCTGTATGGGTCTCG 59 79476994 79478820 AAGACCAACAGATCCATGC 59 NA Mus musculus 50 Mapre2 ENSMUSG00000024277 ENSMUST00000115830 1 1 2 89 18 23931146 23991357 GCCTGGATGTTCAAATTGG 59 23991410 23991428 CATGCAATGATGTCATGCC 59 NA Mus musculus 50 Ccny ENSMUSG00000024286 ENSMUST00000053917,ENSMUST00000115867 3 2 2 80 18 9345244 9345262 AAATTTACCGGTTCGTTCG 58 9332939 9345200 CAAGGTATACCAGGGTGAC 59 NA Mus musculus 50 Pou4f3 ENSMUSG00000024497 ENSMUST00000025374 3 1 1 69 18 42555589 42555607 AAAGAATGTGGTGAGGGTC 59 42555638 42555658 GACAGCAGAGTATTTCATTCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Dctn4 ENSMUSG00000024603 ENSMUST00000025505 3 1 2 111 18 60703705 60703724 ATTGAGTATTACCAGCAGCT 58 60703798 60705417 CAAGACTGTACTTGTCCGA 58 NA Mus musculus 50 Add3 ENSMUSG00000025026 ENSMUST00000111741,ENSMUST00000050096,ENSMUST00000025999 2 3 3 82 19 53306622 53306640 AAGTAAGGAGCAAGACCAC 59 53306686 53307525 TGACTTTCACCAAAGTGGA 58 NA Mus musculus 50 Csnk1d ENSMUSG00000025162 ENSMUST00000096557,ENSMUST00000018274,ENSMUST00000070575,ENSMUST00000106124 1 4 4 81 11 120834500 120835145 CTGACCAAATGATAAGTCGT 57 120834438 120834456 ATGAGGAAGTTATCTGGCT 57 NA Mus musculus 50 Sfxn3 ENSMUSG00000025212 ENSMUST00000062213,ENSMUST00000084493 1 2 3 83 19 45124397 45124728 TTCTACAGGAAGACTCCGA 59 45124773 45124793 GCTGCGATTAGAGTAATTCAC 59 NA Mus musculus 50 Btrc ENSMUSG00000025217 ENSMUST00000111940,ENSMUST00000065601,ENSMUST00000111936 1 3 3 80 19 45531035 45531056 AGAGAAGACTGTAATAATGGCG 59 45531096 45545519 ACAGCTGTTGTAAGTCTGTC 59 NA Mus musculus 50 Alas2 ENSMUSG00000025270 ENSMUST00000112715 3 1 2 101 X 146986802 146986820 ATTTAGTATTGGACGCTGC 57 146986885 146987562 TTCCTGTCTTGGAGTTCTC 58 NA Mus musculus 50 Dock9 ENSMUSG00000025558 ENSMUST00000100299 3 1 3 93 14 121959865 121959883 AAAGTGACAGAGGTCATGC 59 121959167 121959619 CTGTAAACTGGTATTGCGC 59 NA Mus musculus 50 D11Bwg0517e ENSMUSG00000025576 ENSMUST00000106278,ENSMUST00000103023 2 2 5 133 11 118357703 118358268 ATTCCAACTTATGGAGCGG 59 118355531 118356540 ACTCTACCATAACTGTCACTG 58 NA Mus musculus 50 Nudt5 ENSMUSG00000025817 ENSMUST00000026927,ENSMUST00000114962 2 2 2 102 2 5775945 5775963 ACCTTGTTACCTCAGAGGA 59 5777090 5782087 ACTGTTTCCCAAGTTCTGG 59 NA Mus musculus 50 Aasdhppt ENSMUSG00000025894 ENSMUST00000051589,ENSMUST00000115732 2 2 2 68 9 4299306 4299324 AAGCCTGATGGATCTAGAC 58 4296798 4296816 AAACTTCCTCTGGGATAGC 58 NA DesignNoJunction Mus musculus 50 Htr4 ENSMUSG00000026322 ENSMUST00000027560 2 1 3 98 18 62597597 62624098 TGTACTAAGGGATACAGTGG 57 62624159 62624177 TAAGTATCACTGGGCTGAG 58 NA Mus musculus 50 3110009E18Rik ENSMUSG00000026388 ENSMUST00000027637,ENSMUST00000056038,ENSMUST00000112644 1 3 3 81 1 122047256 122047276 AACCTGTAGTGTATCATGGAG 58 122047319 122057195 CTCAAAGGGACATCTTGCT 59 NA Mus musculus 50 Med27 ENSMUSG00000026799 ENSMUST00000028139 1 1 2 84 2 29355817 29355835 AATGAGAGCGTCTACACAG 59 29364979 29378306 CATGGTCTGTCACCTTCTG 59 NA Mus musculus 50 Tsc1 ENSMUSG00000026812 ENSMUST00000028155,ENSMUST00000113869,ENSMUST00000113870,ENSMUST00000113868 3 4 5 80 2 28531217 28531236 GAGGAATCTACCTGATTTCC 57 28531279 28531529 GATATTGCAGCTTCTTCCT 57 NA Mus musculus 50 Ptges2 ENSMUSG00000026820 ENSMUST00000028162 3 1 1 60 2 32255595 32255613 TCATTAGTGCCCTCAAGAC 58 32255930 32255949 TAAGTGATGACCTCTTCCAG 58 NA DesignNoJunction Mus musculus 50 5730472N09Rik ENSMUSG00000026858 ENSMUST00000076488 2 1 4 265 2 30227059 30232229 AGCTGTTTGAGGAAGACAG 59 30233695 30233714 GCTTCTTTCTTCTAGAAGCC 58 NA DesignRelaxed Mus musculus 50 Sh3glb2 ENSMUSG00000026860 ENSMUST00000113621,ENSMUST00000100215 1 2 4 82 2 30201907 30201925 TACTATGCACAGTGCTACC 58 30201445 30201582 AAGGTGCCTGGAAATATGG 59 NA Mus musculus 50 Sec16a ENSMUSG00000026924 ENSMUST00000114082,ENSMUST00000091252,ENSMUST00000114078 2 3 4 80 2 26293952 26293970 CTACCAGTCTCAGTACCCT 59 26291552 26293909 TACAGGCCATACATATCCTG 58 NA Mus musculus 50 Grin1 ENSMUSG00000026959 ENSMUST00000114318,ENSMUST00000114314,ENSMUST00000114310,ENSMUST00000028335 2 4 8 104 2 25150058 25151320 AACCTGCAGGATAGAAAGAG 59 25149973 25149991 CCTACGTCTCTTGAAGCTG 59 NA Mus musculus 50 Arrdc1 ENSMUSG00000026972 ENSMUST00000028349,ENSMUST00000114414 1 2 4 161 2 24782192 24782210 ATAAGCTGGTGAAGACTGG 58 24781953 24782071 CCTTATAGGATACCTTCTGTAGC 59 NA Mus musculus 50 Baz2b ENSMUSG00000026987 ENSMUST00000112550 3 1 4 133 2 59839603 59844107 CCCATGTGTACTTGAAGCT 59 59816690 59816709 GAATTCCCAGTAATGGTGGA 59 NA Mus musculus 50 Tfpi ENSMUSG00000027082 ENSMUST00000111718,ENSMUST00000028487,ENSMUST00000090732,ENSMUST00000111714,ENSMUST00000111717,ENSMUST00000111712 3 6 8 88 2 84284292 84284911 TCTGTGAGAATCCAGTCCA 59 84284222 84284242 GCGATCAGTTACAGTATTTCC 58 NA Mus musculus 50 B230118H07Rik ENSMUSG00000027165 ENSMUST00000111231,ENSMUST00000090513 1 2 2 88 2 101402502 101416177 ACCGAAGAGATACTTGGAG 58 101402432 101402452 GTAAACTTAGGAGTGAGAGTC 57 NA Mus musculus 50 1700037H04Rik ENSMUSG00000027327 ENSMUST00000103188,ENSMUST00000028800 1 2 3 115 2 130973979 130973997 ATTACCTTCACTCTGCCTC 58 130973010 130973900 ATGCTGTAACCTTCAGAGG 58 NA Mus musculus 50 Trpm7 ENSMUSG00000027365 ENSMUST00000103224,ENSMUST00000028843 1 2 3 80 2 126622899 126622918 AGATCATGCTAGCCTTTAGC 59 126621222 126622856 CTCCCACTCCTTGTAAGTC 58 NA Mus musculus 50 Mal ENSMUSG00000027375 ENSMUST00000028854,ENSMUST00000028853 1 2 2 70 2 127464345 127464366 GGCTTTACTTACAAGCATTACC 59 127460762 127460780 TAGATCAGAGTGACCACGT 59 NA DesignNoJunction Mus musculus 50 Prom2 ENSMUSG00000027376 ENSMUST00000028855,ENSMUST00000103214 1 2 2 81 2 127365931 127366262 GTGAAGACAGATGAGGTGG 59 127365868 127365886 GCACCAATAGGAGGTAGAG 58 NA Mus musculus 50 Bcl2l11 ENSMUSG00000027381 ENSMUST00000110341,ENSMUST00000019281,ENSMUST00000103211,ENSMUST00000103210,ENSMUST00000050696 1 5 6 126 2 127954750 127972838 GCTTCCATACGACAGTCTC 59 127972927 127983982 AATCATTTGCAAACACCCTC 59 NA Mus musculus 50 Nfatc2 ENSMUSG00000027544 ENSMUST00000099067,ENSMUST00000029057,ENSMUST00000109182 3 3 7 132 2 168345048 168348751 GGAGAAGACTACAGGACCT 59 168344934 168344952 GGAGCATCTGAAGACAGAG 59 NA Mus musculus 50 Dsn1 ENSMUSG00000027635 ENSMUST00000103129,ENSMUST00000029163,ENSMUST00000103130 3 3 3 81 2 156822553 156823357 TACGTGGAGTTAGTGATGG 58 156822490 156822508 GGAGGTACTGAGTACTCTC 57 NA Mus musculus 50 Pex5l ENSMUSG00000027674 ENSMUST00000108226,ENSMUST00000108224,ENSMUST00000108225,ENSMUST00000078226,ENSMUST00000108221 3 5 5 88 3 32853309 32853329 CCAAAGTACAAGTACCTTGTG 58 32852115 32853259 AGAACAGAGCTGTCAACTG 59 NA Mus musculus 50 Evi1 ENSMUSG00000027684 ENSMUST00000108270,ENSMUST00000029230 3 2 3 93 3 29879872 29884273 GCCCTTTATCTGTGAGGTC 59 29879797 29879816 GATTTGGGTTCTGCAATCAG 59 NA Mus musculus 50 Ect2 ENSMUSG00000027699 ENSMUST00000108300,ENSMUST00000108298,ENSMUST00000029248,ENSMUST00000075155,ENSMUST00000108296 2 5 5 80 3 27044925 27044944 GCTGTATTGTACGAGTATGC 58 27043968 27044882 GTCACCAATTTGACAAGCT 58 NA Mus musculus 50 Ndst4 ENSMUSG00000027971 ENSMUST00000106416,ENSMUST00000029596 1 2 2 80 3 125314539 125386064 CCTTCTAAATCCAATCAGCA 57 125386107 125386125 TTCACAAAGGTGTACAAGC 58 NA Mus musculus 50 Mmp16 ENSMUSG00000028226 ENSMUST00000029881 1 1 3 171 4 17780987 17914724 TTTCAATGTGGAGGTTTGG 58 17914859 17923350 CTTCATCCAGTCGATTGTG 58 NA Mus musculus 50 Pappa ENSMUSG00000028370 ENSMUST00000084501 3 1 2 117 4 64817612 64817631 GGACTGTAACTACGAAAGGT 59 64817711 64837258 AACATCCAAGTAGGCTCTG 58 NA Mus musculus 50 Dab1 ENSMUSG00000028519 ENSMUST00000080139 3 1 6 85 4 104361033 104386236 AGTCAACCTAATAGCCAGC 59 104386376 104386394 TCAAAGTCCATTGACAGGT 58 NA Mus musculus 50 Lepre1 ENSMUSG00000028641 ENSMUST00000030393,ENSMUST00000102662,ENSMUST00000081606 2 3 4 93 4 118917705 118919251 AATAGAAGAGTCACAGGCTG 59 118919307 118919325 CTTGATACACATGAGGGCT 59 NA Mus musculus 50 Eif2b3 ENSMUSG00000028683 ENSMUST00000106448 2 1 4 145 4 116743363 116743381 CCTCATGAACTCTGTCACC 59 116754260 116759305 TCATTCGTTTAGCTTTGGC 58 NA Mus musculus 50 Rcc1 ENSMUSG00000028896 ENSMUST00000105951,ENSMUST00000030726,ENSMUST00000084250 1 3 3 105 4 131893723 131893741 GAACTGCAAGAGAAAGTGG 58 131891719 131893655 CATTATTGTCCCGGAAAGAG 58 NA Mus musculus 50 Pftk1 ENSMUSG00000028926 ENSMUST00000088858 1 1 5 119 5 5227173 5227194 CTTATGCAACAGTGTACAAAGG 59 5184667 5195289 ACAATGTATCTTCCCTGATGG 59 NA Mus musculus 50 Park7 ENSMUSG00000028964 ENSMUST00000105675,ENSMUST00000030805,ENSMUST00000105674,ENSMUST00000105676,ENSMUST00000105673,ENSMUST00000105677 3 6 6 99 4 150271571 150275125 TGAATGGCAGTCACTACAG 59 150271490 150271508 GCTAGTGCAAACTCAAAGC 59 NA Mus musculus 50 Mtf2 ENSMUSG00000029267 ENSMUST00000112623,ENSMUST00000112628,ENSMUST00000081567 1 3 4 80 5 108529994 108533048 TGACTCAAGGGAAGTAAGC 58 108533092 108533110 CTTGTATATGGGCCAGGAG 59 NA Mus musculus 50 Herc3 ENSMUSG00000029804 ENSMUST00000031823,ENSMUST00000114286 2 2 3 99 6 58844604 58853241 GTGCAAAGACAACAGACAG 59 58853304 58853322 TCAGTACACGATCACAGTG 59 NA Mus musculus 50 Trpv6 ENSMUSG00000029868 ENSMUST00000031902 3 1 2 157 6 41576898 41576916 CTCTGTCTTCCACTACAGG 58 41576212 41576482 TGTGTAGTACTGTATTTCCCAG 59 NA Mus musculus 50 Mkrn1 ENSMUSG00000029922 ENSMUST00000031985,ENSMUST00000051671,ENSMUST00000114822 1 3 4 148 6 39360200 39370101 GCAGATACTTTATGCATGGG 58 39355944 39360089 CTTGCTGTGTTCGTATCTG 58 NA Mus musculus 50 Recql ENSMUSG00000030243 ENSMUST00000032370,ENSMUST00000100832,ENSMUST00000111804,ENSMUST00000111803 1 4 4 80 6 142323393 142323411 ATGGAAGATCAGCTGATGG 59 142321526 142323350 TACATGTTCCTTAGAGCTGG 58 NA Mus musculus 50 Srgap3 ENSMUSG00000030257 ENSMUST00000088373,ENSMUST00000113169,ENSMUST00000060215 3 3 5 95 6 112779500 112779519 GATTGAGCTGGAGTATTCCC 59 112766739 112779443 TGATCCTTCTTGAACTGGTG 59 NA Mus musculus 50 Mef2a ENSMUSG00000030557 ENSMUST00000032776,ENSMUST00000076325 3 2 4 90 7 74413085 74440273 GGATATCGTTGAGGCTCTG 59 74413013 74413033 TTCTGTATGTGGAGTTAGCAC 59 NA Mus musculus 50 Eed ENSMUSG00000030619 ENSMUST00000107234,ENSMUST00000032850 1 2 2 80 7 97120789 97120808 GAGTTCAGTTTAACTGGCAC 59 97120103 97120748 CGTATAAGGTTACTCTGTTGC 58 NA Mus musculus 50 Ptpn5 ENSMUSG00000030854 ENSMUST00000102626,ENSMUST00000033142,ENSMUST00000102627 2 3 4 140 7 54338238 54338256 GAGGAGAAGGTGTACATCG 59 54337329 54338134 GTATTCTGTGCACTTCTCG 58 NA Mus musculus 50 Fgf13 ENSMUSG00000031137 ENSMUST00000088612 1 1 3 130 X 56385118 56419198 CATATTCAGAGCCTCAGCT 58 56379164 56385027 GTTAAACAGAGTGTAAGTGCTG 59 NA InUTR Mus musculus 50 Rpgr ENSMUSG00000031174 ENSMUST00000044598,ENSMUST00000115532,ENSMUST00000115531 2 3 13 117 X 9753212 9753230 GTGGAGCAAGTAGTACAGG 59 9743387 9753131 CTGAAAGTTGAGGAGCCTC 59 NA Mus musculus 50 Arhgap6 ENSMUSG00000031355 ENSMUST00000033721,ENSMUST00000112131,ENSMUST00000112127,ENSMUST00000112126 3 4 6 82 X 165739695 165739715 AGAGGAGCCTTTCAATATCTG 59 165739758 165740257 CATAAGAGCCTGTCATTCCT 59 NA Mus musculus 50 Mpp1 ENSMUSG00000031402 ENSMUST00000033775,ENSMUST00000064027,ENSMUST00000114091 2 3 3 89 X 72363281 72366781 CGCTACAGATGTTCATGAG 57 72363210 72363228 TAACAAACTTCAGTCCTGC 57 NA Mus musculus 50 Mcf2l ENSMUSG00000031442 ENSMUST00000095456,ENSMUST00000110879,ENSMUST00000110876,ENSMUST00000033819,ENSMUST00000064464,ENSMUST00000098927,ENSMUST00000110873,ENSMUST00000110867,ENSMUST00000110866,ENSMUST00000110863 1 10 12 93 8 13006759 13006777 CACACCTCATCTCAACAGG 59 13006833 13007696 CGCAGGAATATTCTGTTGTG 59 NA Nonspecific Mus musculus 50 Ggn ENSMUSG00000031493 ENSMUST00000098609,ENSMUST00000033886,ENSMUST00000071601 1 3 3 206 7 29958034 29958052 TTCGAGGTGCTTAATTCCT 58 29958877 29958895 CACTCAGGTAGAATGGGTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Nr3c2 ENSMUSG00000031618 ENSMUST00000109913,ENSMUST00000109912 3 2 4 133 8 79609565 79679119 GGACAACACAACTATCTGTG 58 79679215 79709690 TTCTTTGACTTTCGAGCTC 57 NA Mus musculus 50 Nudt7 ENSMUSG00000031767 ENSMUST00000066514 1 1 3 287 8 116657543 116657561 TAAGAGGAAGTACTGCAGG 57 116675606 116675624 TCATCAGCATTAGGTTGGG 59 NA DesignNoJunction Mus musculus 50 Tbx20 ENSMUSG00000031965 ENSMUST00000052946,ENSMUST00000115276 2 2 2 97 9 24563240 24563258 CCTTGCTCAATCTGAAGTC 58 24554824 24563181 CTTGGTTATCAGTTGGTTCTG 58 NA Mus musculus 50 Ets1 ENSMUSG00000032035 ENSMUST00000034534,ENSMUST00000050797 3 2 3 83 9 32540601 32541532 TTACTTCATCAGCTACGGT 57 32541579 32541597 TAGGACTCTGTGATGAAGC 58 NA Nonspecific Mus musculus 50 1600029D21Rik ENSMUSG00000032068 ENSMUST00000034572 3 1 2 124 9 50309223 50309834 AATGGAACAAGGACCTCTG 59 50309921 50309940 AATAAATCCTTGGGCCAGAG 59 NA Mus musculus 50 Ogfod1 ENSMUSG00000033009 ENSMUST00000109556 2 1 2 61 8 96579231 96579440 TATCCTTTCACCAGGTGTC 58 96579464 96579483 GCCACTTATAGACAAACGTG 58 NA Nonspecific, DesignRelaxed Mus musculus 50 Triobp ENSMUSG00000033088 ENSMUST00000109690,ENSMUST00000109689,ENSMUST00000089366 3 3 6 152 15 78790361 78790379 GGGATACCCTATCTGGAGG 59 78790495 78791387 GTCCCAATCCACAGAAGAG 59 NA Mus musculus 50 Lpp ENSMUSG00000033306 ENSMUST00000038053,ENSMUST00000115314 2 2 2 85 16 24889970 24889988 TGTCTGTGATGTCAAGCTC 59 24890035 24971926 CCAGGGTATTAATGTAGCAGG 59 NA Mus musculus 50 Qsox1 ENSMUSG00000033684 ENSMUST00000111764,ENSMUST00000035325 3 2 2 102 1 157630601 157630619 CATTCCATAAACGACTGGC 58 157629787 157630535 CAGTAAGGACAGCATCCTC 59 NA Mus musculus 50 Aspm ENSMUSG00000033952 ENSMUST00000053364 3 1 2 84 1 141373471 141373933 CTCATTCAGGCTTATTGGAG 58 141373980 141373998 TCCTAGACTGAAGGATGAC 57 NA Mus musculus 50 4732418C07Rik ENSMUSG00000034210 ENSMUST00000074425 2 1 4 120 4 115446598 115447672 AGATTAGCTTTAGGATGCCT 58 115447755 115447773 CATGTGGTATCCTCTGGAC 59 NA Mus musculus 50 Spcs2 ENSMUSG00000035227 ENSMUST00000036274 1 1 1 112 7 106993277 106993295 AAGAGCATCTTCCTTGTGG 59 106988367 106988386 AACTTCAGGGTGTATTTGTC 57 NA DesignNoJunction Mus musculus 50 Mlc1 ENSMUSG00000035805 ENSMUST00000109368,ENSMUST00000042594 1 2 2 80 15 88795922 88796384 CCTAAAGTCCTACTCTGTGG 58 88795861 88795879 TCCTCTACGTTTAGAGCGA 59 NA Mus musculus 50 Rorb ENSMUSG00000036192 ENSMUST00000112832,ENSMUST00000112834,ENSMUST00000040153 2 3 3 237 19 19062588 19185042 GCACAAATTGAAGTGATACC 57 19052464 19057842 ACTTTACAGCATCTCTTGAC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Spg20 ENSMUSG00000036580 ENSMUST00000107971 3 1 2 84 3 54925654 54925672 CTCCCAGAAGATGACAGAG 58 54925717 54930474 CTTCACTTGAATCTTTGGTCTG 59 NA Mus musculus 50 Dchs1 ENSMUSG00000036862 ENSMUST00000078482 1 1 1 60 7 112903100 112903120 CCTGTGACTGTGGATATTACC 59 112903060 112903078 ATAGCAAGTTGAGGTCAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Armc3 ENSMUSG00000037683 ENSMUST00000049255 2 1 2 157 2 19218012 19218032 CTTCATCTTCCTTAAGAAGGG 57 19218530 19222108 TTTCCCTTTCCTTACTCCC 58 NA Mus musculus 50 D1Ertd53e ENSMUSG00000038174 ENSMUST00000097724 2 1 2 91 1 58591486 58592242 GAAGAGAAGATGGCTTTGAC 58 58591414 58591432 TTTGATCCCTAGGTCAGTG 58 NA Mus musculus 50 Cep250 ENSMUSG00000038241 ENSMUST00000109619,ENSMUST00000039994,ENSMUST00000109618,ENSMUST00000094421 1 4 4 81 2 155789466 155789484 CTGGGAGAGTGTAGAAGAG 58 155789529 155789861 CACTAGACTCTCACACCTC 58 NA Mus musculus 50 Accn3 ENSMUSG00000038276 ENSMUST00000049346,ENSMUST00000115065 1 2 2 125 5 23921748 23921928 AACAGCAACTGAGTTTCCT 59 23922016 23922035 TTAAGCTATAAGGAGGGCTG 58 NA Mus musculus 50 Lrrc56 ENSMUSG00000038637 ENSMUST00000070458,ENSMUST00000047093 1 2 4 190 7 148393137 148393391 AAACCAGTACCAGGAATGG 59 148393752 148393770 ATCTTTCCTGCTGGAACTC 59 NA Mus musculus 50 Gngt2 ENSMUSG00000038811 ENSMUST00000107712,ENSMUST00000107714,ENSMUST00000107711,ENSMUST00000100532,ENSMUST00000036088,ENSMUST00000107709,ENSMUST00000107708 1 7 7 81 11 95706443 95706803 CCACGTGATCTGATTTCCA 59 95706847 95706866 CTTTGAGAAGAGGGTCTGTC 59 NA Mus musculus 50 Cldnd2 ENSMUSG00000038973 ENSMUST00000040227 2 1 1 76 7 50697641 50697660 GTAGCCAGAATACCATTGTC 58 50698243 50698261 CTTTGAAGTGTATACGGCC 58 NA DesignNoJunction Mus musculus 50 Tekt5 ENSMUSG00000039179 ENSMUST00000043415,ENSMUST00000115831 3 2 2 80 16 10383018 10386165 TCCAGATTCGAGATAACCG 58 10382956 10382975 CGTCAATATACTGTGCAGAG 58 NA Mus musculus 50 Slc9a8 ENSMUSG00000039463 ENSMUST00000047815,ENSMUST00000073873 2 2 4 110 2 167282957 167285159 TCAGCATTAGTGTTGAAGCA 59 167285232 167285250 GAGTGAGATTCCTTCTGCC 59 NA Mus musculus 50 Foxp3 ENSMUSG00000039521 ENSMUST00000115740,ENSMUST00000115739,ENSMUST00000115738,ENSMUST00000045566 2 4 4 129 X 7168645 7169295 CTTCCCAGAGTTCTTCCAC 59 7169800 7169820 GATTTCATTGAGTGTCCTCTG 58 NA Mus musculus 50 Svs2 ENSMUSG00000040132 ENSMUST00000099101 1 1 3 95 2 164062709 164062728 CGCTCACAATCCTATAAAGG 58 164062632 164062653 CCTTTGTAAATAGTTACCGGG 58 NA Mus musculus 50 Dgkz ENSMUSG00000040479 ENSMUST00000111304,ENSMUST00000111303 3 2 4 131 2 91785015 91785338 CTGCTTATGAAAGCCATCAC 59 91784612 91784921 ATACACTGCTGACTCACTC 58 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000049326 2 1 17 103 2 90999433 90999451 ATCAAGCCTGTCTTTGACC 59 90998287 90999368 GAACTATTACTCACCTGGGAG 59 NA Mus musculus 50 Madd ENSMUSG00000040687 ENSMUST00000111376,ENSMUST00000111383 1 2 17 80 2 90998620 90998638 ATCAAGACTCTGTCATCGG 58 90998285 90998578 CGGAACTATTACTCACTTCAG 57 NA Mus musculus 50 Iqsec3 ENSMUSG00000040797 ENSMUST00000046373,ENSMUST00000051049 2 2 2 82 6 121334270 121334288 CCTTCACGTACACCTTCTG 59 121334081 121334224 GCCATGGGAGTAATACTCG 59 NA Mus musculus 50 Arhgef1 ENSMUSG00000040940 ENSMUST00000098683,ENSMUST00000047873 3 2 4 180 7 25710496 25710811 CCTTCAGAAAGTACTGTCCC 59 25710954 25711048 CAACTCCTCCAGTTGTCTG 59 NA Mus musculus 50 Sox16 ENSMUSG00000041287 ENSMUST00000047373 1 1 1 61 11 69469322 69469340 TACACAACTACCCAAGGGA 59 69469365 69469383 TAGGCTGTCGAATAGTTGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nkx6-2 ENSMUSG00000041309 ENSMUST00000097974,ENSMUST00000039606,ENSMUST00000106095 3 3 3 209 7 146767835 146767853 AGACCAAGTATTTGGCAGG 59 146767452 146767470 TGTATTCGTCATCGTCCTC 58 NA DesignNoJunction Mus musculus 50 Sgsm1 ENSMUSG00000042216 ENSMUST00000048112,ENSMUST00000057209 2 2 3 81 5 113674105 113679902 TTCTTCAACGAAATGGCTG 58 113674042 113674060 GAATCTGCACCTTATGCAC 58 NA Mus musculus 50 Zmym6 ENSMUSG00000042408 ENSMUST00000094713 3 1 2 81 4 126779143 126779162 CACCTAGCAATGTCAAATGG 59 126779205 126781530 ACATAAACATCCTACCCTGG 58 NA Mus musculus 50 Synpo ENSMUSG00000043079 ENSMUST00000097566,ENSMUST00000031639,ENSMUST00000115318 1 3 3 60 18 60763474 60763492 TGTCCCACAGAATTCATCC 59 60763432 60763450 GGGTTTGGAATCAAGTGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zmpste24 ENSMUSG00000043207 ENSMUST00000058754,ENSMUST00000106269 3 2 2 82 4 120759963 120759981 GAATCCCTTACCTCTGGAG 58 120756016 120759918 CAATGACTGAATGATCTCGT 57 NA Mus musculus 50 E330026B02Rik ENSMUSG00000043719 ENSMUST00000098441,ENSMUST00000060896 2 2 2 92 9 105686574 105688020 TTATTGTAGAAGCCTGCCA 58 105686500 105686518 GATGATCTAGGTCCTCCTG 57 NA Mus musculus 50 A330049M08Rik ENSMUSG00000043924 ENSMUST00000105859,ENSMUST00000105858,ENSMUST00000105860,ENSMUST00000064481,ENSMUST00000105857 3 5 5 86 4 134927867 134932914 TGTATAAGAGCTCTGGAGC 58 134927799 134927817 ACATCTTCAGCAGGATCAG 59 NA Mus musculus 50 Gpr75 ENSMUSG00000043999 ENSMUST00000109430,ENSMUST00000055730 2 2 2 60 11 30791969 30791988 TATCAACCAGATGCCAATCC 59 30792011 30792029 GAAGTTGATGGCTGATACC 57 NA DesignNoJunctionSingleExon Mus musculus 50 A830080D01Rik ENSMUSG00000044150 ENSMUST00000112464 3 1 2 102 X 155997798 155997819 ATCTACGACATGACATTGAGAG 59 155997881 156004374 GGAGACTGATGATTCCTCTC 58 NA Mus musculus 50 Acp1 ENSMUSG00000044573 ENSMUST00000062740 2 1 2 60 12 31589961 31589980 AAGCAGTATTCAGGAAACTG 57 31589835 31589941 CTGTCTATCCTCCAATTATCTG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Wdr81 ENSMUSG00000045374 ENSMUST00000051512,ENSMUST00000100845 2 2 2 89 11 75263035 75263312 CATCTTGTTATGTTGGGCC 58 75262964 75262982 TCTTCTGGTAGATGTTGCC 58 NA Mus musculus 50 BC049762 ENSMUSG00000045942 ENSMUST00000109118,ENSMUST00000054226,ENSMUST00000065950 3 3 3 109 11 51067908 51067926 TTTCTCCTTATGCTGAGGC 59 51067511 51067529 GTACACAGAAAGTGGAGGG 59 NA DesignNoJunction Mus musculus 50 Vps13a ENSMUSG00000046230 ENSMUST00000068156,ENSMUST00000099611,ENSMUST00000112873 1 3 3 80 19 16714600 16714707 ACAAAGCCAATTAAAGGTGC 59 16714539 16714557 CACTGCTCCAACTAAACCT 59 NA Mus musculus 50 C2cd3 ENSMUSG00000047248 ENSMUST00000051777,ENSMUST00000098259 1 2 2 80 7 107543743 107543763 GATACTAGTATGCTGCTTGAC 58 107543805 107544277 CTCAGATGAGTTCAGTGCT 58 NA Mus musculus 50 Olfr685 ENSMUSG00000047794 ENSMUST00000051355 3 1 1 60 7 112329033 112329052 AATGTTCTCCTTCCTCACTC 59 112328992 112329010 CAGAACATGGACATGATGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Ldlrad3 ENSMUSG00000048058 ENSMUST00000058790,ENSMUST00000111222,ENSMUST00000057414 3 3 3 61 2 101795323 101898073 AGTTCTCTAGAACCAGGCA 59 101795280 101795299 TAGTACACAAGCTGGTTCTC 59 NA DesignRelaxed Mus musculus 50 NM_146359.2 ENSMUSG00000048469 ENSMUST00000061096 3 1 1 60 7 109952385 109952403 CTCTTAGGTATGCTTCGGT 58 109952426 109952445 ACAATTGCTACTCCAATCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Bdnf ENSMUSG00000048482 ENSMUST00000053317,ENSMUST00000111051,ENSMUST00000111049,ENSMUST00000111047,ENSMUST00000111046,ENSMUST00000111050,ENSMUST00000111052,ENSMUST00000111045,ENSMUST00000111044,ENSMUST00000111043,ENSMUST00000111042 3 11 11 60 2 109564058 109564076 ACAGTCCTAGAGAAAGTCC 57 109564099 109564118 TGGTCTCGTAGAAATACTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr938 ENSMUSG00000048501 ENSMUST00000056499 3 1 1 60 9 38885721 38885739 TTCTAGCACTCTCCTTCAG 57 38885679 38885697 GAGCTAAGGATGGTCAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Thnsl1 ENSMUSG00000048550 ENSMUST00000054591,ENSMUST00000114584 1 2 4 143 2 21131594 21131612 TCAGTGAGTTAAGCACAGC 59 21133067 21133085 GACATCTGGTCAAGGTCAG 59 NA DesignNoJunction, InUTR Mus musculus 50 2610027C15Rik ENSMUSG00000050212 ENSMUST00000052876,ENSMUST00000106152,ENSMUST00000106150 3 3 3 98 4 125826657 125826675 AAGATGAGGACACCATGAC 58 125826735 125826755 TGAAGACATTGACACTAAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Prkca ENSMUSG00000050965 ENSMUST00000059595,ENSMUST00000100302 2 2 2 80 11 107839596 107839614 GGAACACATGATGGATGGA 59 107822954 107839553 TGGTAAGCGATTATCTCTGG 58 NA Mus musculus 50 Ccnb3 ENSMUSG00000051592 ENSMUST00000115752,ENSMUST00000056725 2 2 3 81 X 6586842 6586959 AACCATCATTGAGGAGATGAC 59 6586781 6586802 CTTTAACCATAATGGGCTTGAG 59 NA Mus musculus 50 Nav2 ENSMUSG00000052512 ENSMUST00000064383 2 1 5 132 7 56219807 56617482 GAGGATCTACACGGATTGG 59 56617577 56627697 CTTGTCATTTGCTACAACCT 58 NA Mus musculus 50 Arhgef15 ENSMUSG00000052921 ENSMUST00000065040,ENSMUST00000108671,ENSMUST00000108670 1 3 3 80 11 68764552 68764571 GTCCTTTCTTCGTGTATGTG 58 68763592 68764509 CGTTTGTATCCATAAGGCG 58 NA Mus musculus 50 Krt16 ENSMUSG00000053797 ENSMUST00000007280 3 1 2 143 11 100107824 100107936 GCGAGAATATCCACTCCTC 59 100107559 100107577 AACTCTGACTTTGGCTCTG 59 NA Mus musculus 50 Camk2d ENSMUSG00000053819 ENSMUST00000106402,ENSMUST00000106404,ENSMUST00000106397,ENSMUST00000106396,ENSMUST00000106401 2 5 9 99 3 126511159 126513566 GGAAACAAGGAGTCAACTG 58 126537515 126537533 CAATCAGTTGCTCAGTGAC 58 NA Mus musculus 50 Zfp277 ENSMUSG00000055917 ENSMUST00000069692,ENSMUST00000069637 1 2 2 81 12 41061917 41061935 GAGCGAAATGATACAAGCT 57 41056166 41061873 GGTTCAACAGTACAGATCTG 57 NA Mus musculus 50 OTTMUSG00000016300 ENSMUSG00000056061 ENSMUST00000069943 3 1 1 211 2 180068628 180068646 GTCGGAACTCATGTATGCT 59 180073939 180073957 TAGTCCAGTTGACATGTGG 58 NA DesignNoJunction, InUTR Mus musculus 50 Pign ENSMUSG00000056536 ENSMUST00000112806 1 1 4 80 1 107454087 107454106 CTGTGACACTGATATAGCTC 57 107453629 107454044 CTAGGGCAGAAGAATAGGA 57 NA Mus musculus 50 Hamp2 ENSMUSG00000056978 ENSMUST00000074671 3 1 1 143 7 31707756 31707774 ATGAGACAGACTACAGAGC 58 31707548 31707566 ACAGGAGGGTTTGTTACAG 59 NA DesignNoJunction Mus musculus 50 Spna2 ENSMUSG00000057738 ENSMUST00000113719,ENSMUST00000113717,ENSMUST00000046257 2 3 6 104 2 29855575 29857763 GACAACCAATATCAGTCTCTG 58 29857829 29857847 CTGTAACTCGTTTGCTTCC 58 NA Mus musculus 50 Col13a1 ENSMUSG00000058806 ENSMUST00000092484,ENSMUST00000105454,ENSMUST00000048320,ENSMUST00000051826 2 4 4 61 10 61424087 61424105 AATGGAAGTTCTACTCGCG 59 61424044 61424062 GCAGTTACATCCTGGAGAC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Zfp426 ENSMUSG00000059475 ENSMUST00000115562,ENSMUST00000080386 2 2 2 84 9 20279406 20279424 CTCACTGAACCCAGATCAG 59 20277542 20279358 GAGCTGATACCCTACTGTG 58 NA Mus musculus 50 Nlrp9b ENSMUSG00000060508 ENSMUST00000073151 3 1 2 134 7 20609919 20609937 ATATGCTCTGCAGAAATCC 57 20610035 20611879 TATTCGGCTGTATTTCGTC 57 NA Mus musculus 50 Slc4a4 ENSMUSG00000060961 ENSMUST00000113218,ENSMUST00000066831,ENSMUST00000005812 3 3 5 87 5 89658000 89661794 CGACAATGACGATTCTGAC 58 89661845 89661863 TAGGAAAGGTTGCTGTTCC 59 NA Mus musculus 50 Dlgap4 ENSMUSG00000061689 ENSMUST00000000094,ENSMUST00000109568,ENSMUST00000109566,ENSMUST00000099145 3 4 6 182 2 156571923 156574077 AGGAATACAAGTTGACTGCA 59 156574745 156574763 GACTTACAACTGGAGTCGT 58 NA Mus musculus 50 Ccdc134 ENSMUSG00000068114 ENSMUST00000089174,ENSMUST00000100394 3 2 2 177 15 81965097 81965115 AATTCCAACTGGAACCTCC 59 81965560 81971305 TAGGAATAAACTCTGTCTGGTC 58 NA Mus musculus 50 Csde1 ENSMUSG00000068823 ENSMUST00000071942,ENSMUST00000029446 2 2 2 82 3 102850840 102850947 GTGGTTCCTGATATGCTCTC 59 102850992 102851010 GAATGGAATGAAACCGTGC 59 NA Mus musculus 50 Olfr658 ENSMUSG00000070421 ENSMUST00000106817,ENSMUST00000089296 3 2 2 68 7 111793380 111793398 TTCACATTTCTCACCAAGC 58 111793330 111793348 GTGGTCACAGTAGGTATGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 AI132189 ENSMUSG00000070985 ENSMUST00000107697,ENSMUST00000095086 1 2 2 97 4 49462019 49462037 TGAGAAACTGCAAGAGGTG 59 49460755 49460773 AGATCACACCAATTCCTGG 59 NA DesignNoJunction Mus musculus 50 Dmrtc1b ENSMUSG00000073027 ENSMUST00000101324,ENSMUST00000113609 1 2 2 98 X 99908971 99910009 CATGGAACACAAGGTTCTG 58 99910071 99910089 CAGACTTCCAGTCAGTGAG 59 NA Mus musculus 50 EG620627 ENSMUSG00000074377 ENSMUST00000108520,ENSMUST00000094824 1 2 2 85 7 14573598 14573616 GACCACGACTCATAACCTC 59 14570309 14573550 GATGAGATAAATCGCCTTGG 58 NA Mus musculus 50 Hspa12b ENSMUSG00000074793 ENSMUST00000099349 1 1 2 91 2 130962793 130964175 ATGATGAGGAAATGGGAGG 58 130964230 130964248 CTGTGAAAGATGCCTTCTG 58 NA Mus musculus 50 Gas2l3 ENSMUSG00000074802 ENSMUST00000099374,ENSMUST00000105298,ENSMUST00000099375 2 3 3 80 10 88891883 88893639 TGGCTTACTAGGTGTTGAC 58 88891821 88891840 TTGATTAGCTGACACAACAG 58 NA Mus musculus 50 Ifna5 ENSMUSG00000076440 ENSMUST00000107136,ENSMUST00000107135,ENSMUST00000102804 3 3 3 113 4 88481755 88481773 CAATGAAGTCCATCAGCAG 58 88481849 88481868 AAGTATTTCCTCACAGCCAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 TRBV16 ENSMUSG00000076473 ENSMUST00000103274 1 1 1 60 6 41102160 41102178 ACTCAACTCTGAAGATCCA 57 41102202 41102220 CTTGCACAAAGATACACCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Ccdc47 ENSMUSG00000078622 ENSMUST00000002043,ENSMUST00000106865 1 2 2 80 11 106063800 106064053 TTACATTTAATGTGCCTGGC 58 106063739 106063758 AAATCACCATGTTCATCAGG 58 NA Mus musculus 50 Psme3 ENSMUSG00000078652 ENSMUST00000019470,ENSMUST00000107268,ENSMUST00000107267 2 3 3 80 11 101182056 101182076 ACTGTCACAGAGATTGATGAG 59 101182115 101183114 GAGAGTGACATACTGATTCCTC 59 NA Mus musculus 50 mmu-mir-34b ENSMUSG00000065492 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-705 ENSMUSG00000076012 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-682 ENSMUSG00000076236 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 mmu-mir-467g ENSMUSG00000080556 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Mus musculus 50 Gna12 ENSMUSG00000000149 ENSMUST00000000153 3 1 1 255 5 141305952 141305970 CCATCTTCGACAACATCCT 59 141238578 141261353 TACTTCACTGATTCACCCAG 59 NA DesignRelaxed Mus musculus 50 Acvrl1 ENSMUSG00000000530 ENSMUST00000000542 1 1 1 102 15 100967552 100967803 AACATCCTAGGCTTCATCG 59 100967869 100967887 GAAAGTCATAGAGGGAGCC 59 NA Mus musculus 50 Atp5f1 ENSMUSG00000000563 ENSMUST00000090671 3 1 1 90 3 105754570 105754588 AAATCCAGGATGCAATCGA 59 105746774 105754517 GCAATGTTATTCCTCTGCAC 59 NA Nonspecific Mus musculus 50 B9d1 ENSMUSG00000001039 ENSMUST00000102657,ENSMUST00000001066 2 2 2 133 11 61323019 61325877 TACAGAAGTTCACAAGCTGG 59 61326185 61326203 CACCACATTGAAGAGGAGG 59 NA Mus musculus 50 0610009O03Rik ENSMUSG00000001082 ENSMUST00000001109,ENSMUST00000114329,ENSMUST00000114331 3 3 3 124 5 34978413 34978684 ATGATGTTGTCCCTGACAG 59 34978307 34978325 GTGGAGAGGTTAACGTTCC 59 NA Mus musculus 50 Slc25a42 ENSMUSG00000002346 ENSMUST00000110127,ENSMUST00000063788 3 2 2 82 8 72712345 72712745 ACGCCTAAGGAAATGTACAG 59 72712282 72712301 CCGAAATAGAGGGTCTTCAG 59 NA Mus musculus 50 Ebi3 ENSMUSG00000003206 ENSMUST00000003274 3 1 1 134 17 56093424 56093726 CTTCATTGCCACTTACAGG 58 56093824 56093842 ACATTTAGCATGTAGGGCA 58 NA DesignNoJunction Mus musculus 50 Dlgap1 ENSMUSG00000003279 ENSMUST00000003366,ENSMUST00000060072,ENSMUST00000097288 3 3 3 81 17 71115416 71136132 GAAGAAGAGAAGTGCTTCC 57 71136177 71136195 TATCATGGAAGTCCAGGTC 58 NA Mus musculus 50 Fcgrt ENSMUSG00000003420 ENSMUST00000003512 1 1 1 81 7 52350575 52350596 GATGAGCACCATTATCAATGTC 59 52349254 52350534 ATCTGGCTGATGAATCTAGG 58 NA Mus musculus 50 Rab11a ENSMUSG00000004771 ENSMUST00000004892 2 1 1 80 9 64573354 64573372 TTCATTGAGACATCTGCTC 57 64564779 64573311 AACAATGCGGTATATCTCTG 57 NA Mus musculus 50 Itgb1bp3 ENSMUSG00000004939 ENSMUST00000005069 1 1 1 93 10 80662179 80662357 TGGAAGTGGTCTATTTAGATGG 59 80662107 80662125 TAGGATGTGTTGAGCAGTC 58 NA Mus musculus 50 Snx6 ENSMUSG00000005656 ENSMUST00000005798 3 1 1 80 12 55864701 55866579 GGAGTAAAGGATGTAGACGAC 59 55864641 55864659 AGATGCATCCTTAACTCGG 59 NA Mus musculus 50 Napa ENSMUSG00000006024 ENSMUST00000006181 2 1 1 83 7 16698741 16698829 GAAGAGTCCAACAGCTCAG 59 16698876 16698894 GATAGCCTTCTGGTACTGC 59 NA Mus musculus 50 Runx1t1 ENSMUSG00000006586 ENSMUST00000006761,ENSMUST00000098257,ENSMUST00000098256 2 3 3 80 4 13802628 13802646 ACATCGGGAATTCCTTCAC 59 13802690 13808212 TCATTCACAGCTTCCTCAG 59 NA Mus musculus 50 Crlf1 ENSMUSG00000007888 ENSMUST00000008032 1 1 2 79 8 73023106 73023231 TCAAGTACAAGCTGAGGTG 59 73023274 73023292 GATATGGCATGAGTGAGGG 59 NA DesignNoJunction Mus musculus 50 2310044H10Rik ENSMUSG00000008140 ENSMUST00000085440 2 1 2 147 7 51747538 51747556 TCAATACATCTGTGCAGCT 58 51746609 51747332 ATGAGGTGCCAGTATTTGG 59 NA Mus musculus 50 Rdh13 ENSMUSG00000008435 ENSMUST00000008579 2 1 1 96 7 4386695 4394210 GGAAGGTCATTAAAGAGGAGG 59 4386619 4386637 ATCTCAAAGCCATCCTCAG 59 NA Mus musculus 50 Tusc4 ENSMUSG00000010057 ENSMUST00000010201 3 1 1 83 9 107446738 107446756 CATGTCCAGAAGATCTCCG 59 107446803 107446941 AACACCATAGTACAGCAGG 58 NA Mus musculus 50 1700049J03Rik ENSMUSG00000011052 ENSMUST00000011196 3 1 1 74 17 26691350 26691368 AAGTACATTGCAGACAGGA 58 26691294 26691312 CCTTTAGCTCCATGTCTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Rpa3 ENSMUSG00000012483 ENSMUST00000012627 2 1 1 93 6 8206798 8207699 ATTGATGGAGCCACTTGAC 59 8206723 8206742 GGTATAAGATGCACAGAGCA 59 NA Mus musculus 50 Myl2 ENSMUSG00000013936 ENSMUST00000111750,ENSMUST00000014080,ENSMUST00000111751 1 3 3 90 5 122551771 122551789 CCAAGAAGCGGATAGAAGG 59 122551843 122552718 ATGATTGTGAAGGCTTCCT 58 NA Mus musculus 50 Fam18b ENSMUSG00000014177 ENSMUST00000014321 1 1 1 80 11 62697202 62697220 CTCAGTAGCAGCTTTATCG 57 62697264 62698586 TGTGACATTCTTTACTGCC 57 NA Mus musculus 50 Mov10l1 ENSMUSG00000015365 ENSMUST00000109364,ENSMUST00000015509 2 2 2 80 15 88852540 88854049 AAATAGGAGTGAGAGTTGGA 57 88854092 88854110 GAATAAGGCATTCTGGCTC 58 NA Mus musculus 50 Hnf4g ENSMUSG00000017688 ENSMUST00000017832,ENSMUST00000108393,ENSMUST00000108394 3 3 3 84 3 3652887 3652906 TCTCAAGATCCACTAACTGG 58 3652953 3657066 TCTCTGGAGTTGCAATCTG 59 NA Mus musculus 50 Mfng ENSMUSG00000018169 ENSMUST00000018313 3 1 1 142 15 78597605 78603453 CAACAGACATTCATCTTCACTG 59 78597263 78597281 AAGAAGGCATCGAACTCTG 59 NA DesignNoJunction Mus musculus 50 Phf23 ENSMUSG00000018572 ENSMUST00000018716,ENSMUST00000101526 3 2 2 122 11 69812626 69812749 TAGAATCAGGTGACGACTC 58 69812834 69812853 TAATCTTAGCACAGGAGAGG 58 NA Mus musculus 50 Mrpl45 ENSMUSG00000018882 ENSMUST00000019026 1 1 1 80 11 97182810 97182830 CTTTCAAAGGAAGGATTGACG 59 97182871 97185180 TCTTATCTTTCGGATTGCCA 59 NA Mus musculus 50 Tmem129 ENSMUSG00000019295 ENSMUST00000019439 3 1 1 93 5 33998031 33998049 AGACTCAAACCTACCTGTG 58 33997506 33997974 TTCTGATGAATTCAGCCGA 58 NA Mus musculus 50 Mypn ENSMUSG00000020067 ENSMUST00000095580 1 1 1 80 10 62615591 62615610 GAAAGTCGAGTGGTACAGAG 59 62612782 62615549 ATGGATCGAGGTTTCTTCTG 59 NA Mus musculus 50 Ddc ENSMUSG00000020182 ENSMUST00000101512 2 1 3 109 11 11776322 11776342 CCTATTTCTTCGCTTACTTCC 58 11775581 11776251 CTTCACAACCTTGAACCAG 58 NA Mus musculus 50 Sgcd ENSMUSG00000020354 ENSMUST00000109220,ENSMUST00000077221,ENSMUST00000109219 2 3 4 80 11 47008581 47008599 TCTGAAGCTAGAAGGAGAC 57 46946174 47008537 TATAGGGCATTACCTGGTC 57 NA Mus musculus 50 Mapk9 ENSMUSG00000020366 ENSMUST00000020634,ENSMUST00000109179,ENSMUST00000102778,ENSMUST00000043321,ENSMUST00000109178 1 5 5 95 11 49680536 49682687 CAAGATGTGTACTTGGTAATGG 59 49682740 49682761 GTAGAGAAGGTAGGACATTCTC 59 NA Mus musculus 50 Matn3 ENSMUSG00000020583 ENSMUST00000020899 2 1 1 82 12 8962291 8965608 GTGTTCAGCCATTGATAAGTG 59 8965651 8965670 AGTGGTAAGAGCCATTTCTG 59 NA Mus musculus 50 Tyki ENSMUSG00000020638 ENSMUST00000020969,ENSMUST00000085526,ENSMUST00000085524 1 3 3 95 12 27156304 27156323 CTTGACCTAGTTGACCAGTG 59 27156381 27158874 CAGTGTGGTCTTACCAGTG 59 NA Mus musculus 50 Ccl11 ENSMUSG00000020676 ENSMUST00000000342 2 1 1 92 11 81875210 81875229 ATGACCAGTAAGAAGATCCC 58 81875284 81875717 GGTCTTGAAGACTATGGCT 58 NA Mus musculus 50 Dhrs7 ENSMUSG00000021094 ENSMUST00000021512 3 1 1 112 12 73753430 73754103 CGAGGAAGTAACTAAGTCTATGAG 59 73753341 73753361 AGACTTCCTTCAGATCATTGG 59 NA Mus musculus 50 Atp6v1d ENSMUSG00000021114 ENSMUST00000021536 1 1 1 80 12 79953303 79953321 TGATGGGTGAAGTGATGAG 58 79951516 79953259 TAACTGTGGTGCTGAAGTC 59 NA Mus musculus 50 9830169C18Rik ENSMUSG00000021234 ENSMUST00000065536,ENSMUST00000021659 2 2 2 103 12 85689322 85689569 CTTAAAGAGAACCGGAGCA 59 85689237 85689255 TGTTCAAAGAGATAGGGCC 58 NA Mus musculus 50 Aoah ENSMUSG00000021322 ENSMUST00000021757 1 1 2 169 13 20932031 20942967 TACTCGATGAAGCTATGAAGG 59 20992387 20997538 GGGATATTTCATGGTAGAGGA 58 NA Mus musculus 50 Gcnt2 ENSMUSG00000021360 ENSMUST00000110191 1 1 3 133 13 40956630 41048950 AATAGGATCCCTGGAGTCC 59 41053527 41053545 ATACAAATGCCATGGACGT 59 NA DesignNoJunction Mus musculus 50 Syk ENSMUSG00000021457 ENSMUST00000055087 1 1 1 80 13 52736151 52737239 AAACTACTACAAGGCCCAG 58 52737280 52737301 GAGAACTTGTAGTAGTTGATGC 58 NA Mus musculus 50 Ctsl ENSMUSG00000021477 ENSMUST00000021933 2 1 1 98 13 64469492 64469511 GAACATGAGAATGATCCAGC 58 64469304 64469431 TCCTCATTGGTCATGTCAC 59 NA Mus musculus 50 Vcl ENSMUSG00000021823 ENSMUST00000022369 2 1 2 102 14 21848591 21849012 ATCTCTTACAGGTATGCGAG 58 21849077 21849095 TCATCACTGATGTTGGTCC 59 NA Mus musculus 50 Tnfrsf10b ENSMUSG00000022074 ENSMUST00000022663 2 1 1 81 14 70173222 70173240 GAGGGTATTGACTACACCA 57 70173282 70174901 CGACTTTATCTTCCTTACAGAC 58 NA Mus musculus 50 Pmm1 ENSMUSG00000022474 ENSMUST00000023112,ENSMUST00000071462 1 2 2 102 15 81786152 81786170 TCATTGAGTTCCGGAATGG 59 81783220 81786087 ATCTTCTCCTTCTTGTCCAG 58 NA Mus musculus 50 Pak2 ENSMUSG00000022781 ENSMUST00000023467 2 1 1 80 16 32020342 32021868 CTGTTACAGCATCCTTTCCT 59 32020281 32020299 CATTGCTTCTTTAGCTGCC 59 NA Mus musculus 50 Kpna1 ENSMUSG00000022905 ENSMUST00000004054 2 1 1 80 16 36020859 36021577 CCAGAATTTGCTAAGGTTTCTC 59 36021616 36021636 ATCAGCTAGTACATCAGTGTC 59 NA Mus musculus 50 Scg5 ENSMUSG00000023236 ENSMUST00000024005 2 1 1 83 2 113632085 113632103 CCTAAGGACTTCAGTGAGG 58 113628989 113632039 TAGACATCCATCATCAGCAG 58 NA Mus musculus 50 Twf2 ENSMUSG00000023277 ENSMUST00000024047 2 1 1 95 9 106114596 106114614 AAGATGCTATATGCAGCCA 58 106114672 106115071 GAGGTCATCCTTTACTGTCC 59 NA Mus musculus 50 ENSMUSG00000023482 ENSMUSG00000023482 ENSMUST00000024247 3 1 1 60 14 80172448 80172467 GAAGGACTCTATTGAACAGG 57 80172490 80172508 TTGTGTTTGTAACTCTCCC 57 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Pcbp4 ENSMUSG00000023495 ENSMUST00000024260 2 1 1 88 9 106364738 106364849 CCAATGATCTGATTGGCTG 58 106364901 106364919 CCCGATCTTAATATGTGCC 57 NA Mus musculus 50 Lrpprc ENSMUSG00000024120 ENSMUST00000112308 3 1 1 80 17 85161339 85161357 GGAATCGAATACATTGCCT 57 85155611 85161295 TCTATGTTCATCGACCTCC 58 NA Nonspecific Mus musculus 50 Tekt4 ENSMUSG00000024175 ENSMUST00000025002 1 1 1 121 17 25609188 25610686 GGAGCTACTGAAGGAAACC 59 25611080 25611098 AGTTCATCTCACACGACTC 59 NA DesignNoJunction Mus musculus 50 H2-Ke2 ENSMUSG00000024309 ENSMUST00000025163 1 1 1 131 17 34076604 34076706 ATATCGTGAAGGAGGAGCT 59 34076491 34076510 CTGTGATGTAGTCTAGCCTC 58 NA Mus musculus 50 Pcdh12 ENSMUSG00000024440 ENSMUST00000025311 2 1 1 94 18 38428856 38434979 CCTAATACAGGTCTAGCCCT 59 38428781 38428799 TTGTCTCGGTAATTGGTGG 59 NA Mus musculus 50 Atg2a ENSMUSG00000024773 ENSMUST00000045351 1 1 1 80 19 6251793 6251811 AGTCCCAGAGTACCTTCTC 59 6251855 6252436 CTGTCTCATCCTTAGCCTC 58 NA Mus musculus 50 Tnks2 ENSMUSG00000024811 ENSMUST00000025729 3 1 1 80 19 36956216 36956234 TTGGAATCAATGCCTATGG 57 36956277 36958564 GATTAAGACCTTGTTGTCCA 57 NA Mus musculus 50 Tcf7l2 ENSMUSG00000024985 ENSMUST00000041717,ENSMUST00000111662,ENSMUST00000111657,ENSMUST00000061496,ENSMUST00000111658,ENSMUST00000078917,ENSMUST00000111654,ENSMUST00000111659,ENSMUST00000111652,ENSMUST00000111649,ENSMUST00000111653,ENSMUST00000111656 3 12 15 110 19 55892255 55892273 ATCTTCAGATGAAATGGCC 57 55892347 55982922 CTTTGTTCGAAACGATGTG 57 NA Mus musculus 50 Pnliprp2 ENSMUSG00000025091 ENSMUST00000026081 3 1 1 80 19 58849726 58849744 TGATAAATCTCTTCCGGCC 59 58849787 58851918 AGAAGTTGAACTCTTTCCCG 59 NA Mus musculus 50 Jph3 ENSMUSG00000025318 ENSMUST00000026357 1 1 1 67 8 124309306 124309324 GAGATGAGCTCAAGTCCAG 59 124313325 124313343 AATGTTGAGCAGGATCACC 59 NA DesignNoJunction Mus musculus 50 1600016N20Rik ENSMUSG00000025500 ENSMUST00000026573 3 1 1 80 7 148397463 148397697 GTGGATACACGGAAGATCTC 59 148397402 148397421 GGTGAAGGTCTGTATAGGAC 58 NA Mus musculus 50 Taf3 ENSMUSG00000025782 ENSMUST00000114909,ENSMUST00000026888 3 2 4 163 2 9839830 9842690 AGCACTTATGTGATCCGTG 59 9838049 9838067 CACTGCATCTCTTCTGGAG 59 NA Mus musculus 50 1700029F09Rik ENSMUSG00000026049 ENSMUST00000027215 1 1 1 82 1 44143889 44144688 GAACTTGTTGGAGAAAGTAGC 59 44143827 44143845 CTGCCATGGAATGATTTGC 59 NA DesignNoJunction Mus musculus 50 Smap1 ENSMUSG00000026155 ENSMUST00000027339 3 1 1 81 1 23884630 23898713 CCAGAACAGATACAGTGCA 59 23884567 23884587 GAAAGTTCTCTGGAAGATTGG 58 NA Mus musculus 50 B3gat2 ENSMUSG00000026156 ENSMUST00000063663 1 1 1 90 1 23851848 23851945 TAACTGCACCAAGGTTCTC 59 23851999 23852017 AATGTTCACTGTGTCCAGG 59 NA Mus musculus 50 Tsn ENSMUSG00000026374 ENSMUST00000027623 3 1 1 81 1 120206399 120206418 TAGAACAAACTGCTCGAGAG 59 120205406 120206355 CACCTCTTTGGAATGTCCT 59 NA Mus musculus 50 Rgs7 ENSMUSG00000026527 ENSMUST00000111184,ENSMUST00000097459,ENSMUST00000097460,ENSMUST00000027812,ENSMUST00000085853 3 5 5 80 1 177009712 177014111 GAACTTAAGGTTCTGGTTGG 58 177009651 177009669 CATATTTCCTGCACTCTCG 57 NA Mus musculus 50 Ifi202a ENSMUSG00000026535 ENSMUST00000000266 3 1 1 139 1 175894030 175894048 GGTATCTGGACAACTGACC 59 175892939 175893927 TTTCAGGCATGATGACCTC 59 NA Mus musculus 50 Eng ENSMUSG00000026814 ENSMUST00000009705,ENSMUST00000113272 1 2 2 80 2 32533141 32533159 CCATCTTGTCCTGAGTAGC 59 32533202 32533453 CTGATGATCACCTCATTGCT 59 NA Mus musculus 50 Itgav ENSMUSG00000027087 ENSMUST00000028499,ENSMUST00000111740 3 2 2 80 2 83635092 83635111 AATGTAAGTCCAGTTGTGTC 57 83635154 83635611 ATCTGGACTTGAAACTCCT 57 NA Mus musculus 50 Traf6 ENSMUSG00000027164 ENSMUST00000004949 3 1 2 80 2 101528707 101528725 TTTCCCTGACGGTAAAGTG 59 101528766 101530228 AATGTACTTGATGATCCTCGAG 59 NA Mus musculus 50 F2 ENSMUSG00000027249 ENSMUST00000028681,ENSMUST00000111335 1 2 2 80 2 91473395 91473413 TGTGAATGTCACCCATACC 59 91473255 91473351 GTGGTGGAGTTGATTTCAG 58 NA Mus musculus 50 Chgb ENSMUSG00000027350 ENSMUST00000028826 1 1 1 80 2 132612267 132618069 CAAGTCCTGAAGAAGAGTGG 59 132618111 132618130 CAACCGTACTTCAAACTTCG 59 NA Mus musculus 50 Pck1 ENSMUSG00000027513 ENSMUST00000029017 3 1 1 93 2 172980853 172981444 GGAGCATATGCTGATCCTG 59 172981500 172981519 CAAGTTAGTCTTCCCACAGG 59 NA Mus musculus 50 Gnas ENSMUSG00000027523 ENSMUST00000109096,ENSMUST00000069396,ENSMUST00000080493,ENSMUST00000087876,ENSMUST00000109088,ENSMUST00000109089,ENSMUST00000087871,ENSMUST00000109085,ENSMUST00000109087,ENSMUST00000109084 2 10 14 80 2 174167364 174167382 TGAGAACCAGTTCAGAGTG 58 174167425 174168714 TGCTCATAGAATTCAGGTGG 59 NA InUTR Mus musculus 50 BC051070 ENSMUSG00000027902 ENSMUST00000029510 3 1 1 80 3 106191742 106191849 CTTTCATATCAAGGCTCAGTG 58 106191682 106191703 GTGTAGTCATCCATATCAATGG 58 NA Mus musculus 50 Itga10 ENSMUSG00000028102 ENSMUST00000029744 2 1 1 80 3 96460152 96460170 CCTACAACACTAGCCTGAG 59 96460214 96460379 TCACTGATTTGGCCTTCTG 59 NA Mus musculus 50 Sdcbp ENSMUSG00000028249 ENSMUST00000029912,ENSMUST00000103008,ENSMUST00000108371,ENSMUST00000108374 3 4 4 85 4 6306120 6306138 CTGCTTATTCTGCCAATCC 58 6306185 6308147 AGGATACAGATTTCCATCTGG 58 NA Mus musculus 50 Slc44a5 ENSMUSG00000028360 ENSMUST00000089948,ENSMUST00000106081 2 2 2 84 3 153924340 153925853 TGCCTACATCATGATTGCA 59 153925899 153925919 CAGAATGTTTCTCATGAGCAG 59 NA Mus musculus 50 Wdr31 ENSMUSG00000028391 ENSMUST00000107452,ENSMUST00000030087 3 2 3 81 4 62118606 62119861 TAAGACCATCAGATTATGGGAC 59 62118546 62118564 ACAATGGGTCTGGATATGC 59 NA Mus musculus 50 Usp1 ENSMUSG00000028560 ENSMUST00000030289,ENSMUST00000091358 2 2 2 88 4 98593351 98594930 TAGAGGATCTGAGATTGACCA 59 98594977 98594998 CCACAAATGGTAACAAGTTCTC 59 NA Mus musculus 50 Cyp2j13 ENSMUSG00000028571 ENSMUST00000030305,ENSMUST00000107078,ENSMUST00000097973,ENSMUST00000097972 2 4 4 124 4 95738327 95738346 CAGTCATTATAAGCAGCCTG 58 95735557 95738242 GGAGAAGATCAATCCATTTCC 58 NA Mus musculus 50 Epha8 ENSMUSG00000028661 ENSMUST00000030420 2 1 1 156 4 136487932 136487950 AAGATCCCTATCCGATGGA 59 136487709 136487812 CAGAGCTGATGACATCCTG 59 NA Mus musculus 50 Rad54l ENSMUSG00000028702 ENSMUST00000102705,ENSMUST00000102704 1 2 2 81 4 115772345 115772883 GCTGTGTAATCATCCAGCT 59 115772282 115772300 TGGGAAGATACCCAAAGTG 58 NA Mus musculus 50 Rspo1 ENSMUSG00000028871 ENSMUST00000030687 2 1 1 83 4 124682410 124684402 ATGCATCAAATGCAAGATCG 59 124684448 124684466 TGTAAGTACAAGCCCTCCT 59 NA Mus musculus 50 2610109H07Rik ENSMUSG00000029005 ENSMUST00000030862 1 1 1 211 4 147483808 147484161 GAAGAAAGAGAAACACTGGAG 58 147476668 147476686 GGAATTTGGCATAGCAACG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Nkx1-1 ENSMUSG00000029112 ENSMUST00000030994 3 1 1 98 5 33773775 33773793 AACAAGTTTAAGGCCACTC 57 33773695 33773713 CTGGAACCAGATCTTCACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Pdgfra ENSMUSG00000029231 ENSMUST00000000476 3 1 1 80 5 75559860 75562539 TTTACATCTATGTACCAGACCC 59 75562580 75562598 CATCCTCTTCCACGATGAC 59 NA Mus musculus 50 Cdkl2 ENSMUSG00000029403 ENSMUST00000069937,ENSMUST00000086978,ENSMUST00000113143,ENSMUST00000113140 1 4 4 82 5 92466381 92468274 AGTTACTAAAGCAACTGCG 58 92466317 92466335 AAAGACTAGGTACCAACGT 57 NA Mus musculus 50 4930519G04Rik ENSMUSG00000029564 ENSMUST00000031547,ENSMUST00000112153,ENSMUST00000031546 2 3 3 82 5 115320202 115320221 AGACACTTTGTCTATGGGAC 59 115320266 115320737 CTGTTGGAATCGTCATTGG 58 NA Mus musculus 50 Wipi2 ENSMUSG00000029578 ENSMUST00000036872 3 1 1 280 5 143140436 143141390 CTAACCACAATTCAGAAGATCC 58 143142194 143142820 GTGTAGGCTTCTAAGTTGG 57 NA DesignRelaxed Mus musculus 50 Hyal5 ENSMUSG00000029678 ENSMUST00000031689 2 1 1 153 6 24827074 24827872 TCTATATGAGGATGACCTTGTG 58 24841265 24841286 GATATAAGGATTCAGGATGGTC 57 NA DesignNoJunction Mus musculus 50 Fscn3 ENSMUSG00000029707 ENSMUST00000031719 2 1 1 80 6 28380661 28381520 TCAGTCATCTATGATGCTGAG 59 28381562 28381580 ACTGTCACATTCGTACTGG 59 NA Mus musculus 50 Tsc22d4 ENSMUSG00000029723 ENSMUST00000100540,ENSMUST00000100539,ENSMUST00000049554 1 3 4 83 5 138189076 138192442 GAGACAGGAAAGGTACCTC 58 138192490 138192508 CTGGAGACTTATGGACCAG 58 NA Mus musculus 50 Fbxl14 ENSMUSG00000030019 ENSMUST00000032094 3 1 1 80 6 119430957 119430975 CATAGATCTGTACGGCTGC 59 119431019 119431037 TTAAGTACCTTGAGGCAGG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Sumf1 ENSMUSG00000030101 ENSMUST00000032191 3 1 1 90 6 108094587 108094605 GTTGAGGAAACGTTCAACC 59 108058571 108068623 AGCAATAGGACTTATGGCAC 59 NA Mus musculus 50 Slc6a12 ENSMUSG00000030109 ENSMUST00000032200 1 1 1 102 6 121297561 121297579 AGATGGAGTTTGTGCTGTC 59 121297645 121301969 ATGAAGAAAGCTCCACCTC 59 NA Mus musculus 50 Nfkbib ENSMUSG00000030595 ENSMUST00000032815,ENSMUST00000085851,ENSMUST00000108274 3 3 3 178 7 29545276 29546630 AACTATGATGGCCATACCC 58 29545036 29545054 GCTTTCAGGAGAAGTTCCA 59 NA Mus musculus 50 2900092E17Rik ENSMUSG00000030680 ENSMUST00000032918 3 1 1 81 7 134159723 134159741 TCACTGATTGACAGGAGAC 58 134158930 134158948 CTGAGAGGACCTTATCCAG 58 NA DesignNoJunction Mus musculus 50 Exod1 ENSMUSG00000030929 ENSMUST00000063902,ENSMUST00000033224 3 2 2 83 7 126930966 126930984 AAACCCAAAGGACTGAGTG 59 126930325 126930920 CCGAGAATCATCTAAGCCAG 59 NA Nonspecific Mus musculus 50 F8 ENSMUSG00000031196 ENSMUST00000033539,ENSMUST00000114085 1 2 2 80 X 72580143 72583569 ATTTGATGAAGGGAAGAGCT 59 72580082 72580100 CAGTCTCTAGCAGATGCAG 59 NA Mus musculus 50 Hcfc1 ENSMUSG00000031386 ENSMUST00000114372,ENSMUST00000033761 2 2 2 80 X 71204506 71204525 ACAAATGTTACCTGTTTGGG 58 71203783 71204465 ATAAGTCATTCAGGTACCTCG 59 NA Mus musculus 50 Kir3dl1 ENSMUSG00000031424 ENSMUST00000033799 2 1 2 82 X 133068494 133068517 AAGAAGGACAGGTTACATACAC 59 133068559 133068578 CTCAGAAATTCGGGAAATGG 58 NA Mus musculus 50 BC019943 ENSMUSG00000031577 ENSMUST00000033982,ENSMUST00000098842 1 2 2 86 8 32266323 32266344 GAACCAGAAGATGAAACTAGGT 59 32266391 32269080 AACTCTGCAGGGAATTCTG 59 NA Mus musculus 50 BC004022 ENSMUSG00000031652 ENSMUST00000034074,ENSMUST00000080846 2 2 3 135 8 89368931 89370723 CCTTTCTTAGACACATGCAG 58 89368815 89368833 CTTGAAGAGGTCTGGATCC 59 NA Mus musculus 50 Lsm6 ENSMUSG00000031683 ENSMUST00000051867 3 1 1 92 8 81333911 81333929 ATATAGCCCTGGAACAGAC 58 81332136 81333855 TGTACAGCACATTGTTTCC 58 NA Nonspecific Mus musculus 50 Herpud1 ENSMUSG00000031770 ENSMUST00000034220 1 1 1 80 8 96915746 96916083 CATGCAATACTTAGCTGCC 58 96916126 96916145 GTAGAGACCACAGGTATCTC 58 NA Mus musculus 50 1110019N10Rik ENSMUSG00000031879 ENSMUST00000093234 3 1 1 127 8 107164454 107164875 GGTTCAAGATGGATGTACAC 58 107163913 107163931 ATTAACAACCTCAAGCAGG 57 NA Mus musculus 50 2310022B05Rik ENSMUSG00000031983 ENSMUST00000034464 3 1 1 60 8 127175298 127175316 AACTTGGCAAGATGAACAC 58 127163501 127175275 GAATTCCATCTGACTCCTCG 59 NA DesignRelaxed Mus musculus 50 4432416J03Rik ENSMUSG00000032028 ENSMUST00000034527 1 1 1 87 9 48147651 48147671 CAGAAACTGTTCCTGATAGTG 58 48134892 48147603 AGTGAACCATAAACTCTGTG 57 NA Mus musculus 50 Lca5 ENSMUSG00000032258 ENSMUST00000034793,ENSMUST00000113217,ENSMUST00000034791 3 3 3 86 9 83293289 83293307 GAGGACTTTCCTTTCACAG 57 83292237 83293239 GTACTCCAGGTACGAAGAG 58 NA Mus musculus 50 Paqr5 ENSMUSG00000032278 ENSMUST00000034817,ENSMUST00000113990 1 2 2 89 9 61816650 61816668 CTGCAGTACCTTCCATGAG 59 61811623 61816597 TCAAGAAACCTGGAGTAGC 58 NA Mus musculus 50 Pkm2 ENSMUSG00000032294 ENSMUST00000034834 3 1 1 80 9 59513747 59516359 CATGGAACCCATGAGTACC 59 59516403 59516421 GAGAATGGGATCAGATGCA 59 NA Nonspecific Mus musculus 50 Zcwpw2 ENSMUSG00000032443 ENSMUST00000111769,ENSMUST00000035017 3 2 2 127 9 117873628 117873647 AAGCATACCAACTCTACAGG 59 117857008 117869088 TTTGGAAACTTGCATCCCT 59 NA InUTR Mus musculus 50 March3 ENSMUSG00000032656 ENSMUST00000102912 2 1 1 97 18 56942742 56942760 TCACCTGCACTTTAGTAGC 59 56922213 56942681 CATAACGCCTTAGTGTCCA 59 NA Mus musculus 50 Nlrp3 ENSMUSG00000032691 ENSMUST00000079476,ENSMUST00000101148,ENSMUST00000101147,ENSMUST00000108758 3 4 4 90 11 59379440 59379458 CAATGATCTTGGCGATCTG 58 59379512 59379678 CATTTCACCCAACTGTAGG 58 NA Mus musculus 50 Sox10 ENSMUSG00000033006 ENSMUST00000040019,ENSMUST00000089349 3 2 2 257 15 78989636 78989654 TTCAGGCTCACTACAAGAG 58 78986904 78986922 TGTTGGACATTACCTCGTG 59 NA DesignNoJunction Mus musculus 50 Rpap2 ENSMUSG00000033773 ENSMUST00000112650,ENSMUST00000112651,ENSMUST00000112654,ENSMUST00000065422,ENSMUST00000112653,ENSMUST00000112655 2 6 6 110 5 108032548 108032566 ATGTTCATCACACCAGCTC 59 108032639 108032854 TTTCTGTTTCGGGATAACCC 59 NA Mus musculus 50 1700018A14Rik ENSMUSG00000033993 ENSMUST00000037090 1 1 1 132 18 46359020 46359039 CACTTAAAGTATGTTCCGGT 57 46359134 46359152 CTTGATTCCAATCCTTGGC 58 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Rasl10a ENSMUSG00000034209 ENSMUST00000037218 3 1 1 285 11 4958515 4959441 CAGAAGTCTTGAGGAGTGG 59 4959930 4959948 ATTGTATTTGGCTGAGCAC 58 NA DesignNoJunction Mus musculus 50 Pja1 ENSMUSG00000034403 ENSMUST00000113792,ENSMUST00000036354 2 2 4 60 X 96663305 96663324 GCAAGTTTAAGGATGATCCC 58 96663264 96663283 TGGTTAACACTAGTAAAGCG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Uroc1 ENSMUSG00000034456 ENSMUST00000046128 2 1 1 84 6 90286973 90287658 ATTGAGATGAGAGCCTACC 58 90287705 90287724 AGTTGTTCATGATCATGTGC 58 NA Mus musculus 50 Ccpg1 ENSMUSG00000034563 ENSMUST00000085350,ENSMUST00000037977 3 2 2 81 9 72845264 72846837 TCATCAATCATGAGGGTTCTG 59 72846878 72846898 GAACATTCTAGAGTCAGTCCA 58 NA Mus musculus 50 Scn7a ENSMUSG00000034810 ENSMUST00000042792 3 1 1 81 2 66552105 66564218 ATCACCAGATCCTTTATGCT 58 66552043 66552062 GTCAAATAGAAGGCAAACCA 58 NA Mus musculus 50 D230004J03Rik ENSMUSG00000034832 ENSMUST00000089622,ENSMUST00000051321 1 2 2 127 6 83323319 83323788 TATCAGAACCAGGTGACCA 59 83323210 83323228 TTATGTTGGTCCTTGTGGG 59 NA Mus musculus 50 Creb3l3 ENSMUSG00000035041 ENSMUST00000048384 1 1 1 80 10 80552100 80552118 AGAGGATGAGAAGAAGCTG 58 80551348 80552056 ACTCGTTCCTCATACTTGG 58 NA Mus musculus 50 Tanc1 ENSMUSG00000035168 ENSMUST00000112568,ENSMUST00000037526,ENSMUST00000100082 1 3 4 60 2 59681619 59681637 AAAGATGTCAAGTTCCACC 57 59681661 59681679 CTTGAATCCGTCTGAAACG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Pcdh17 ENSMUSG00000035566 ENSMUST00000071370 2 1 1 99 14 84877405 84877423 ACACTAACAAAGGCTCCTG 59 84877485 84932691 TCTTCTGGTTCTTGTTCGAG 59 NA Mus musculus 50 Pim3 ENSMUSG00000035828 ENSMUST00000042818 2 1 1 60 15 88693963 88694748 TACACTGACTTTGATGGCA 58 88694772 88694790 ATCGGTGATATCGGATCCA 59 NA DesignNoJunction Mus musculus 50 Gm347 ENSMUSG00000035829 ENSMUST00000040324 3 1 1 99 2 28304342 28304362 GTAGAAGATGCTTTGAAGTGC 59 28304420 28305834 CCTGTTTCACATCTTGTAAGTC 59 NA InUTR Mus musculus 50 BC021523 ENSMUSG00000035900 ENSMUST00000088931,ENSMUST00000044582,ENSMUST00000109398 3 3 3 80 15 85957440 85957459 CTAACTTCGTGAAGAACCTG 58 85957502 85957989 TCATGTATACCGTGAAGGC 59 NA Nonspecific Mus musculus 50 Rfxap ENSMUSG00000036615 ENSMUST00000044373 3 1 1 91 3 54609336 54609354 GAGAACAGGATCCTTTGGT 58 54608479 54609284 CTGGACTTCTTAGTAATGACAG 57 NA Mus musculus 50 Ccdc148 ENSMUSG00000036641 ENSMUST00000077687 1 1 1 80 2 58835410 58854234 ACATACGCAGTAACTTCCA 58 58835348 58835366 GGAGATTTCCGGGATACTG 59 NA Mus musculus 50 Ss18 ENSMUSG00000037013 ENSMUST00000040924,ENSMUST00000040964 2 2 4 98 18 14798830 14798849 GCCAGGAAGACTATTATGGG 59 14795979 14798772 CGTAATCATTATGACCATCAGG 58 NA Mus musculus 50 D15Ertd621e ENSMUSG00000037119 ENSMUST00000037270 2 1 1 80 15 58282150 58282168 TCAGTTCCGAATTAAACCG 57 58282212 58284551 AGAGACTTTGAAGGCTCTC 58 NA Mus musculus 50 Il22ra1 ENSMUSG00000037157 ENSMUST00000102546 3 1 1 130 4 135290077 135290095 CAACCTGACTATGGAGACC 59 135290189 135293266 GTTTGATGGTAGTGTGCTG 58 NA Mus musculus 50 Nudt22 ENSMUSG00000037349 ENSMUST00000041686 2 1 1 87 19 7067682 7067930 AGACACAGAGGGTACAGAG 59 7067613 7067631 CGATTGTAGAGGAGGATGG 58 NA Mus musculus 50 BC017647 ENSMUSG00000037750 ENSMUST00000073705,ENSMUST00000100782 3 2 2 276 11 77956708 77967210 TTCAGAAATGGGACACTACAC 59 77967447 77967466 TCAAAGTCCTTGAGTATGCT 58 NA DesignRelaxed Mus musculus 50 Larp2 ENSMUSG00000037814 ENSMUST00000048490,ENSMUST00000099122 3 2 2 117 3 40773849 40773867 ATGAAGTGTCCAGTGTGAG 59 40773948 40774382 TCAAAGTTCAATCGAGGGT 58 NA Mus musculus 50 Ankrd9 ENSMUSG00000037904 ENSMUST00000043459 3 1 1 143 12 112216180 112216199 ATACCTGCATCTACAGAACC 58 112215879 112215897 CTAGAGAAGGCTGGATCTG 58 NA DesignNoJunction, InUTR Mus musculus 50 Sbf2 ENSMUSG00000038371 ENSMUST00000033058,ENSMUST00000084717 2 2 3 80 7 117593504 117595351 GAAGTACAGTTACCCGTATATCC 59 117593446 117593465 CCAATAATGAACGGAGTTGG 58 NA Mus musculus 50 Ift172 ENSMUSG00000038564 ENSMUST00000041565 1 1 1 80 5 31569689 31569975 GGGAATATGGTGGAGAAGG 59 31569627 31569648 CAGCAAGTTTGTAGTTCTTCTC 59 NA Mus musculus 50 Ift172 ENSMUSG00000038564 ENSMUST00000041565 2 1 1 80 5 31555976 31555995 AATTGAATTTAAGCGGCCTG 59 31555787 31555933 CTGTGAGAGGTCTTGATGG 59 NA Mus musculus 50 NP_001074675.1 ENSMUSG00000038665 ENSMUST00000101532 3 1 1 90 6 36950102 36950123 CTATGATTCGGATCTCCTTGAG 59 36944913 36950051 TGATGGATGTCATTGAGCA 58 NA Mus musculus 50 Golga4 ENSMUSG00000038708 ENSMUST00000084820,ENSMUST00000098315 1 2 2 80 9 118474735 118474754 CAGAAGAAATACCAGCAGAG 57 118476088 118476307 TAGTTGTGTCTGTAGCTCC 58 NA Mus musculus 50 Scgb1c1 ENSMUSG00000038801 ENSMUST00000035300 2 1 1 73 7 148032098 148032116 CATCGATGAACTACAGCCT 59 148032505 148032523 CCTCTTGAGCATCTAGCAC 59 NA DesignNoJunction Mus musculus 50 1700071K01Rik ENSMUSG00000038845 ENSMUST00000036374 2 1 1 66 11 95532805 95532823 ATTATCTTTGACTGCCGCT 59 95532853 95536464 TCTGCAAGTCTTTGCTACC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Lmtk2 ENSMUSG00000038970 ENSMUST00000041804 3 1 1 80 5 144932684 144932702 CAATCAAGTCATTCGGGAG 58 144932746 144934486 ACTTCGTACCATCTATCCG 58 NA Mus musculus 50 Siglec5 ENSMUSG00000039013 ENSMUST00000012798,ENSMUST00000085470 1 2 2 80 7 50607311 50607330 ACTTCTTCAGATTGGATGGT 58 50607373 50607549 CCTCAGTCAGAGCTATCAC 58 NA Mus musculus 50 Nlrc4 ENSMUSG00000039193 ENSMUST00000052124 2 1 1 81 17 74844517 74844535 ACATCACATCTGTGACAGG 59 74841311 74844472 CTGTCAATCAGACCACCTG 59 NA Mus musculus 50 2300002M23Rik ENSMUSG00000039269 ENSMUST00000044326 1 1 1 60 17 35705387 35705406 AGCAATGGTTTAGTATCAGG 57 35705427 35705447 AGATTCTTACTGGGTAAGGAC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Rab3gap2 ENSMUSG00000039318 ENSMUST00000069652 1 1 1 80 1 187071969 187073765 CACTAGCTGTGAGATTTGGA 59 187073808 187073826 CTGCCAGGGTATTACAAGG 59 NA Mus musculus 50 Zc3h10 ENSMUSG00000039810 ENSMUST00000040572 2 1 1 60 10 127981728 127981746 ATGAGGTACTTCTGGAGCA 59 127981686 127981704 CTCAGAGTCATCACCTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Cdh18 ENSMUSG00000040420 ENSMUST00000040427 3 1 1 83 15 23296704 23296722 GACTTTCTGGATCCACCAC 59 23296767 23312549 GTTGATAGTGTTTCTGTGGGA 59 NA Mus musculus 50 Sgms1 ENSMUSG00000040451 ENSMUST00000099514,ENSMUST00000087384 1 2 2 80 19 32298074 32322495 AGCATGATTGAGGTAATGG 57 32298012 32298030 AAGACTCTCCTCATCTTGG 57 NA InUTR Mus musculus 50 Os9 ENSMUSG00000040462 ENSMUST00000080975 1 1 1 80 10 126535168 126535405 ATCCAGGAGACAGAGAAGG 59 126535106 126535125 TGTTAGAGCCAATATTGCCT 59 NA Mus musculus 50 Rundc3b ENSMUSG00000040570 ENSMUST00000047485 1 1 1 83 5 8528662 8528680 ATCCTAGACGAGAACACCT 59 8521008 8528615 AAGATAACCCTTCTGCTCC 58 NA Nonspecific Mus musculus 50 Phc1 ENSMUSG00000040669 ENSMUST00000112600 2 1 3 73 6 122286889 122286907 AGATGTCCCTGTATGAACG 58 122285060 122285078 ATATTGAGCCGCATTAGGT 58 NA DesignNoJunction Mus musculus 50 BC010787 ENSMUSG00000040883 ENSMUST00000046831 3 1 1 123 9 21730591 21730704 CCTTTATCTCAGGCTTCCTG 59 21730487 21730505 ATGCAGAGGTTGATGAAGG 59 NA Mus musculus 50 Otud3 ENSMUSG00000041161 ENSMUST00000097830,ENSMUST00000043226 3 2 2 93 4 138452694 138452712 AAATGAAGGCAGGATGGAG 59 138451818 138452637 CTTGTTTGTGACCTTTGGG 59 NA Mus musculus 50 Chd7 ENSMUSG00000041235 ENSMUST00000039267,ENSMUST00000051558 2 2 2 80 4 8753697 8754034 CAATTGGTACAACATGCGA 58 8754076 8754096 TAGAGAAACGTAATGGACTGG 59 NA Mus musculus 50 Gucy1a2 ENSMUSG00000041624 ENSMUST00000115733 3 1 1 107 9 3635143 3759402 GAGAATGAAGATAAGGTGATGG 58 3759470 3759488 CAGTTCATCCAACTTGTCC 58 NA Mus musculus 50 Trem3 ENSMUSG00000041754 ENSMUST00000048065 2 1 1 81 17 48397268 48397287 GGCTTCATACTAAACAAGGG 58 48397331 48397796 AAGGCTGTAACACCTTAGG 58 NA Mus musculus 50 Il17f ENSMUSG00000041872 ENSMUST00000039046 1 1 1 91 1 20769435 20769454 GACATTCGAATCTTCAACCA 58 20768077 20769381 CGAGTGATGTTGTAATCCC 57 NA Mus musculus 50 S100a10 ENSMUSG00000041959 ENSMUST00000045756 1 1 1 145 3 93364960 93364978 CTTGACAAAGGAGGACCTG 59 93368234 93368252 ATAGAAAGCTCTGGAAGCC 59 NA DesignNoJunction Mus musculus 50 Flg ENSMUSG00000041991 ENSMUST00000090856,ENSMUST00000107294 2 2 7 60 3 93133207 93133758 GAACAGTCTTCTGGTTTAGGT 59 93133778 93133798 TAGTGGAGCTAGAAGTTTGTC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Olfr631 ENSMUSG00000042219 ENSMUST00000059011 2 1 2 102 7 111067171 111077303 AAACTCAAGGTCTATCCTTGAG 59 111077366 111077384 TGAGGTAGAACATAGGGCT 59 NA InUTR Mus musculus 50 Gucy2c ENSMUSG00000042638 ENSMUST00000032338,ENSMUST00000078095 1 2 2 80 6 136697353 136697371 GTGACTCTGGATGACAGTG 59 136692540 136697312 AACCTTGTATTTCCTGGTATCC 59 NA Mus musculus 50 Selk ENSMUSG00000042682 ENSMUST00000112268 2 1 1 65 14 30786577 30786595 TAGGATCAGTCACCTTCGT 59 30786623 30787670 GACATTTACCTTCCTCATCC 57 NA Nonspecific, DesignRelaxed, InUTR Mus musculus 50 Nmnat2 ENSMUSG00000042751 ENSMUST00000043313 3 1 1 86 1 154941234 154959280 TGAGGCAGATATGGAAGTG 58 154959330 154959348 TGATTCATGATCCGGTCTG 59 NA Mus musculus 50 1700110M21Rik ENSMUSG00000042888 ENSMUST00000057718 1 1 1 60 14 101597498 101597516 CCTCAACTACTACCCTGTG 58 101597456 101597474 AGCCAATTCCTATTCGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr648 ENSMUSG00000042909 ENSMUST00000052659 3 1 1 60 7 111328409 111328427 TGACACGCTTACCTTTCTG 59 111328367 111328385 CCTATGTGCTCACAGTACG 59 NA DesignNoJunctionSingleExon Mus musculus 50 4732471D19Rik ENSMUSG00000043183 ENSMUST00000058174 1 1 2 85 13 54627964 54627982 ATACTTCTTACGGCCTCCA 59 54628031 54629680 ATTTCTGACCCTTGCTCTC 59 NA Mus musculus 50 Ecm2 ENSMUSG00000043631 ENSMUST00000051504 2 1 1 80 13 49625697 49625716 TACCACCTGGAATACAAGAC 58 49625758 49626648 GCTCAGGATGAATATTCCGA 59 NA Mus musculus 50 Edg5 ENSMUSG00000043895 ENSMUST00000054197 3 1 1 60 9 20772199 20772217 TTCTCTTAGACTCCACCTG 57 20772157 20772176 AAATAGTGGGCTTTGTAGAG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Lmod3 ENSMUSG00000044086 ENSMUST00000095655 1 1 1 190 6 97197327 97197345 GAATTCAGCGCAAATCTCG 59 97188857 97197173 CAGTTGCACAGGTTTAAGG 58 NA Mus musculus 50 1700001O22Rik ENSMUSG00000044320 ENSMUST00000050003 3 1 1 100 2 30653454 30653472 AAACGCTATTGTCCCTTCC 59 30652071 30653390 AAGATATTCTGCCGGACTG 59 NA Mus musculus 50 Olfr159 ENSMUSG00000044801 ENSMUST00000053931 1 1 1 60 4 43782966 43782984 AGGAACAAGGATGTGAAGG 59 43782924 43782942 ACCACTTGAAGTGTTTCTG 57 NA DesignNoJunctionSingleExon Mus musculus 50 Sstr3 ENSMUSG00000044933 ENSMUST00000053239 2 1 1 81 15 78371009 78374244 CAACCCTGTAAGGTTAGGG 59 78370946 78370968 CTCAGATGAAGGATAGGTAACAG 59 NA InUTR Mus musculus 50 1190002N15Rik ENSMUSG00000045414 ENSMUST00000113028,ENSMUST00000061904 2 2 2 60 9 94421048 94424811 AATAAGCCTGAGAATTGGG 57 94421006 94421024 CTTCCTTGTCACAATCGTC 58 NA DesignNoJunction Mus musculus 50 1600029I14Rik ENSMUSG00000046242 ENSMUST00000056103 1 1 1 61 9 99371303 99371321 CCCAGTTTCAAGTTCTCAG 57 99374813 99374831 ATAGTTTGAGCCTCAGCAC 59 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:1918322 ENSMUSG00000046318 ENSMUST00000061103,ENSMUST00000062744 2 2 3 197 18 66242896 66244404 CCGTACTGTCTGGATATCG 59 66236034 66236052 TTTCACCTCATTCTCGGAC 59 NA Mus musculus 50 Pbp2 ENSMUSG00000047104 ENSMUST00000050471 2 1 1 65 6 135259883 135259901 CAAGAAGTATCACCTGGGA 58 135259836 135259854 ACATAGCTGTCCCATTCTG 59 NA DesignNoJunctionSingleExon Mus musculus 50 2010001J22Rik ENSMUSG00000047394 ENSMUST00000049968 1 1 1 89 15 89208568 89208586 CTTACTCCATCTACAGCCG 59 89208270 89208288 GATTCACTACGTGGTAGGC 59 NA DesignNoJunction Mus musculus 50 Tmprss11f ENSMUSG00000048764 ENSMUST00000058080,ENSMUST00000116553 3 2 2 81 5 86957319 86958925 GTAGATGATGGGCCTACAC 59 86957256 86957274 CATCCTTTCTGTTGCACAC 59 NA Mus musculus 50 C1galt1c1 ENSMUSG00000048970 ENSMUST00000058265 2 1 1 60 X 35984486 35984504 TAGTAGAAGGCTGTTGCTC 58 35984444 35984464 ATCTGATTAGGAGTCAGTCCA 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1257 ENSMUSG00000049057 ENSMUST00000111519,ENSMUST00000060795 1 2 2 60 2 89721518 89721537 TCTTAATCCTTTGCTCAACC 57 89721559 89721578 TGCAACAAAGATTCCAAGAG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Purg ENSMUSG00000049184 ENSMUST00000070340,ENSMUST00000078058 1 2 2 60 8 34497062 34497080 CCGCTTCCTAAAGATAGCC 59 34497103 34497122 CTTTCTGATATTGTCCTGCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Slc36a3 ENSMUSG00000049491 ENSMUST00000020502 2 1 3 100 11 54945133 54948775 GAGTATCTCATCCAGACCC 58 54945051 54945070 CCTTCAAAGGTGAAGATAGC 58 NA Mus musculus 50 Fzd9 ENSMUSG00000049551 ENSMUST00000062572 2 1 1 60 5 135725340 135725358 AATCTTCATGTCCTTGGTG 57 135725298 135725316 AGTCTTGGAACTCCATACC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp161 ENSMUSG00000049672 ENSMUST00000112674,ENSMUST00000062369,ENSMUST00000112676 2 3 3 199 17 69734829 69736654 GCCTGAATTGTTCATGGAG 58 69736817 69736835 TCTTAAAGTACGTGCTGCA 59 NA DesignNoJunction, InUTR Mus musculus 50 Grem2 ENSMUSG00000050069 ENSMUST00000055294 2 1 1 66 1 176767347 176767366 TAAAGGTAGCTGAAACACGG 59 176767300 176767318 CTACCATCCTTGTAAGGCG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Vwc2 ENSMUSG00000050830 ENSMUST00000109681,ENSMUST00000056344 2 2 2 119 11 11016598 11054172 GAGGAGTTTGTGGTGTCTC 59 11054254 11054273 CTGATCAGGCTCATATACGG 59 NA Mus musculus 50 Creg2 ENSMUSG00000050967 ENSMUST00000053355 1 1 1 214 1 39704661 39704679 CTGGTGAAGAATCCCACAG 59 39680047 39680065 AACCATTCATACTGTCGGG 59 NA DesignNoJunction Mus musculus 50 Commd1 ENSMUSG00000051355 ENSMUST00000057843 2 1 2 95 11 22873963 22873982 TTGCAGCTTACTTTGAACTG 58 22856680 22873905 CAGATGCAATAGACAGCAG 58 NA Mus musculus 50 Mest ENSMUSG00000051855 ENSMUST00000063387 1 1 1 87 6 30692834 30692852 CTCAGGAACTGCTGTACAG 59 30693063 30694363 GGAAAGATACCTCCATTCGA 58 NA Mus musculus 50 Rspo2 ENSMUSG00000051920 ENSMUST00000063492 3 1 1 80 15 43001322 43001343 CTCATCATTCTGAACTGTATGG 58 42924874 43001282 TGATACATAACTAGCTCGCT 58 NA Mus musculus 50 B3galtl ENSMUSG00000051950 ENSMUST00000100404 3 1 1 80 5 150542110 150542128 GTACCGGTAAAGAAGGAGG 59 150542170 150548014 CTTTACGATGGGTATTCTGTC 58 NA Mus musculus 50 Olfr901 ENSMUSG00000052058 ENSMUST00000063716 2 1 1 60 9 38238213 38238231 GACAGCAATGTCCTATGAC 57 38238252 38238273 GGTAACCTTATAAAGCAATGGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Kcnt2 ENSMUSG00000052726 ENSMUST00000060201,ENSMUST00000086355 3 2 2 81 1 142323562 142325398 GACTACAGGATTATTACGTGG 57 142325438 142325459 CACATTGGAATCTGTAGTACTC 58 NA Mus musculus 50 Mtap1b ENSMUSG00000052727 ENSMUST00000064762 3 1 1 97 13 100205647 100211597 GATCAAGAGATTGGTGAGC 57 100205568 100205586 TTGGAGTTCTTCCAGTCTC 58 NA Mus musculus 50 OTTMUSG00000013002 ENSMUSG00000052865 ENSMUST00000064954 1 1 1 63 2 65691741 65691759 CCCTTCTGCTTACATTTCC 58 65691696 65691714 AATGTGTATCAGGACCCTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 Btn2a2 ENSMUSG00000053216 ENSMUST00000041541,ENSMUST00000110432,ENSMUST00000110433 2 3 3 80 13 23573806 23574598 TCTCATTCCAGAATCCTTCG 59 23573745 23573764 ATCAGCATTACTACAGGCAG 59 NA Mus musculus 50 Cstf2t ENSMUSG00000053536 ENSMUST00000066039 1 1 1 60 19 31158273 31158292 TTGAACCAACAGAATCCTCC 59 31158315 31158333 CCTTCACAGGTCTTCTTGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Tmem179 ENSMUSG00000054013 ENSMUST00000066791 2 1 1 89 12 113741458 113741477 CTACCATCAGTTTGCTATCG 58 113740069 113740088 TAAACCTTCAGGAAAGCCAG 59 NA DesignNoJunction Mus musculus 50 Tceal5 ENSMUSG00000054034 ENSMUST00000066819 2 1 1 168 X 132736976 132738308 CAGGTCTTCAAGTCTGTGG 59 132736255 132736274 TGTACTTCCTTCGTCTTCTG 59 NA DesignNoJunction, InUTR Mus musculus 50 Mdm4 ENSMUSG00000054387 ENSMUST00000067398,ENSMUST00000067429,ENSMUST00000112313 2 3 3 89 1 134891153 134893150 GTAACAAGAAGACGGTGGA 59 134891082 134891100 CAGAGGTAAGTTCCACGTC 59 NA Mus musculus 50 Dnajc8 ENSMUSG00000054405 ENSMUST00000094657,ENSMUST00000105940,ENSMUST00000105939,ENSMUST00000105938,ENSMUST00000105937 2 5 5 65 4 132102575 132102593 GAAGAAGGAAGGAAAGCCT 59 132102621 132106308 TAGACTGCCTGTTTGAACAG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000054546 ENSMUSG00000054546 ENSMUST00000067671 1 1 1 60 15 27505511 27505529 CCTCTCACCATCTTACCCT 59 27505469 27505488 AGACACTTAGAAAGCAAGGA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Commd5 ENSMUSG00000055041 ENSMUST00000068407,ENSMUST00000109793 1 2 2 60 15 76731197 76731215 TATGATTGGAGATCTGGCC 58 76731239 76731257 TACAGAGTCGAGAAGAGGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Zfp819 ENSMUSG00000055102 ENSMUST00000032661 2 1 2 73 7 50865293 50865311 ATTTCTGTCAGAAGCTCCA 58 50865348 50867370 CTCAAAGGACACCAATCTC 57 NA DesignNoJunction Mus musculus 50 Kcnq3 ENSMUSG00000056258 ENSMUST00000070256 2 1 1 80 15 65860237 65860255 ATGCTTCGAATGGATAGGA 58 65856820 65860193 AGTGATGAGTTCTTTGCTG 57 NA Mus musculus 50 Hist3h2ba ENSMUSG00000056895 ENSMUST00000078267 2 1 1 103 11 58762803 58762821 AATACACCAGCTCCAAGTG 59 58762888 58762906 CTTATTCAGGTAGCACGCT 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Ide ENSMUSG00000056999 ENSMUST00000025747,ENSMUST00000087306 2 2 2 83 19 37384373 37386584 GGAAAGTTGCACTATTATCCC 58 37384310 37384328 CATGTCTATCAAGTCGGGT 58 NA Mus musculus 50 NP_001071101.1 ENSMUSG00000057417 ENSMUST00000115428 2 1 1 110 17 24054617 24054940 GACACAAGATTATCATGGTCC 58 24055012 24055030 CCAACAATCGATCTAGCCT 59 NA Mus musculus 50 Zbtb8os ENSMUSG00000057572 ENSMUST00000048467,ENSMUST00000106047 2 2 2 60 4 129019024 129019042 AGTGGCTTTACAAGTTCAG 57 129019065 129020381 TTAAGTACTTTCACTTCCCG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Olfr739 ENSMUSG00000057903 ENSMUST00000075261 2 1 1 73 14 51044355 51044373 GATCAGAAACTTCACACCC 58 51044408 51044428 GAGGTGACATAACAGATTTCC 58 NA DesignNoJunctionSingleExon Mus musculus 50 A630098G03Rik ENSMUSG00000057977 ENSMUST00000079915 2 1 1 83 4 113901405 113901425 CTTATCTGGGAGTTCCTAGAG 58 113901467 113917161 CTTACCATAACCTCTAATCCTG 57 NA Mus musculus 50 Zfp420 ENSMUSG00000058402 ENSMUST00000057652,ENSMUST00000074876 1 2 2 80 7 30657940 30659203 TGACTTCTCTAAGGCTTGC 59 30659247 30659265 TCCCACTGACACAATTCTG 59 NA InUTR Mus musculus 50 Hist1h1b ENSMUSG00000058773 ENSMUST00000080511 2 1 1 61 13 21871948 21871966 CAAAGAAAGCGAAGAAGCC 59 21871905 21871923 CTTCTTAGGACTCTTGGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Opn1sw ENSMUSG00000058831 ENSMUST00000080428 3 1 1 122 6 29328056 29328743 CATGAATAAGCAGTTCCGG 58 29327952 29327971 CCAACTTTGCTAGAAGAGAC 58 NA Mus musculus 50 Rpl18 ENSMUSG00000059070 ENSMUST00000075178 3 1 2 130 7 52973390 52973408 CAGTTCCGGATAGAGTGTC 59 52973502 52974633 ATGTCAACACCCATGATGG 59 NA InUTR Mus musculus 50 Hopx ENSMUSG00000059325 ENSMUST00000081964,ENSMUST00000113453 3 2 2 94 5 77523954 77523972 CAACAAGGTCAACAAGCAC 59 77516829 77523896 GCTTAAACCATTTCTGCGT 59 NA Mus musculus 50 Tcea2 ENSMUSG00000059540 ENSMUST00000103042 2 1 1 80 2 181418288 181418306 CAAGCAGAGTTCAGATGAG 57 181418350 181419157 TCAGAAACATCCAAGAGCT 58 NA Mus musculus 50 Olfr805 ENSMUSG00000060089 ENSMUST00000078876 1 1 1 60 10 129160117 129160137 CTTTCCTCCTTTAATGTTGGG 58 129160077 129160097 GTGATCTATCAGTTTGGAAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Caln1 ENSMUSG00000060371 ENSMUST00000086029,ENSMUST00000111287,ENSMUST00000111288 2 3 3 82 5 130981989 130982007 CTCAACCGATCTCTGTCTG 59 130982053 131093725 GCTTCTCGGATTTCATCCA 59 NA Mus musculus 50 Wbscr18 ENSMUSG00000061118 ENSMUST00000071263 1 1 1 167 5 135540576 135540594 CACCATGTTCGACTTTGAC 59 135540725 135540743 AGGACGACAAAGAAAGTGG 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Kalrn ENSMUSG00000061751 ENSMUST00000076810,ENSMUST00000074924,ENSMUST00000114968,ENSMUST00000114961,ENSMUST00000089655,ENSMUST00000114960,ENSMUST00000114957 2 7 13 99 16 34314435 34332217 ACTCCATGAATGCCTATGTC 59 34314355 34314374 GAGATCTGCTTGATTTGCTG 59 NA Mus musculus 50 Olfr126 ENSMUSG00000061777 ENSMUST00000076936 2 1 1 60 17 37987591 37987610 CTGACAACCATGAATTGCAG 59 37987633 37987651 CCCAATAGGTATGTCAGCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Btbd9 ENSMUSG00000062202 ENSMUST00000079924,ENSMUST00000114635 2 2 3 84 17 30661714 30661732 CGGATGCTATTCTTGATGC 58 30654259 30661666 TCTTCAGGTATGAGCATGC 59 NA Mus musculus 50 Zfp28 ENSMUSG00000062861 ENSMUST00000081022 2 1 1 132 7 6342476 6342494 CTCAGCCAGATATGATCAC 57 6343140 6343158 CTTAAGTCCTTTGGAGGGA 58 NA DesignNoJunction Mus musculus 50 Olfr480 ENSMUSG00000063120 ENSMUST00000071658 3 1 1 60 7 115209810 115209828 CTACTCAACACAGATGTCC 57 115209768 115209786 ACCTAGGTAGGAAGTTCCA 58 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr930 ENSMUSG00000063221 ENSMUST00000076883,ENSMUST00000104874 3 2 2 60 9 38738108 38738127 TATGGCGTATGATCACTACG 59 38738147 38738168 GGACATCATCACATTATACAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 NR_003968.1 ENSMUSG00000063754 ENSMUST00000075049 3 1 1 78 19 29078164 29078183 GAAGGATGACAAAGTTCAGG 58 29078105 29078123 CTTCCTGTACACTTGGACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Lin28b ENSMUSG00000063804 ENSMUST00000099847 2 1 4 94 10 45178700 45188851 GTACACCAACTGTTTCCTC 57 45178624 45178642 GATTCAATGAAGTGGCCTG 58 NA InUTR Mus musculus 50 Rpl7l1 ENSMUSG00000063888 ENSMUST00000078286 3 1 1 86 17 46916285 46916303 GTGTCTTTGTCAAGGTCAC 58 46915452 46916236 ACTTCAGATTTGGAAATCCC 57 NA Nonspecific Mus musculus 50 Crem ENSMUSG00000063889 ENSMUST00000082141,ENSMUST00000025069,ENSMUST00000025070 2 3 6 87 18 3288080 3295046 GGCAATACATTGCTATAGCT 57 3288012 3288030 ATTGTTAATGCCTGGAGTC 57 NA Mus musculus 50 NM_001039233.2 ENSMUSG00000066012 ENSMUST00000084161 3 1 1 97 4 146035633 146035652 TTAACAGAACGTTCCAAAGC 58 146035712 146035730 CCTCGCACCTGATAATCTC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Serpina3c ENSMUSG00000066361 ENSMUST00000085050 3 1 1 104 12 105385627 105386535 ATAGTGTCTCAGATGGTCC 57 105385541 105385561 GGTTCTTCTACTAAGAATGCG 58 NA Mus musculus 50 1700023D19Rik ENSMUSG00000066500 ENSMUST00000085422,ENSMUST00000107897 3 2 2 80 7 51964490 51965633 CTCTAAGACAGACGTTCCTC 59 51965674 51965694 CTTAATGCTCCCTTTAGTTCC 58 NA Mus musculus 50 2210010N04Rik ENSMUSG00000066621 ENSMUST00000085701 3 1 1 152 5 144967426 144968272 GGAGAAGAAGTACCTACACG 59 144967293 144967311 TTCATGTCTTGCTCTGTGG 59 NA Mus musculus 50 OTTMUSG00000019268 ENSMUSG00000067208 ENSMUST00000112567,ENSMUST00000087185 1 2 2 61 X 150458124 150466980 CGTTGATACTCGGAGTGTC 59 150458081 150458099 TCAGCTTGTAGATGCAGTC 59 NA Nonspecific, DesignNoJunctionSingleExon Mus musculus 50 Speer3 ENSMUSG00000067855 ENSMUST00000088625 3 1 1 78 5 13795570 13796302 CAACTTCAGGACTCAGAGAC 59 13796343 13796361 GAAACTCATTGTGCAGGAG 58 NA DesignRelaxed Mus musculus 50 Ccdc87 ENSMUSG00000067872 ENSMUST00000088653 3 1 1 60 19 4841786 4841804 AGGAAGCTCAATCGAATGG 59 4841827 4841846 AGACTGACTCTATCCTTTCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr203 ENSMUSG00000068182 ENSMUST00000089305 1 1 1 60 16 59303004 59303023 GACTGCGTTTATTCTCAGAG 58 59303046 59303064 CAAGAACATGGGAACTTGC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Selenbp2 ENSMUSG00000068877 ENSMUST00000090848 2 1 1 141 3 94504027 94506249 TACAAGAATGAGGAAGGCAC 59 94506435 94506453 TGAAGTAAAGGAAGCGGTC 59 NA Mus musculus 50 Hist1h2bn ENSMUSG00000069307 ENSMUST00000110469 2 1 3 281 13 21900500 21901669 CTCCAAGTGACATAGTTTGTG 58 21899817 21899836 GGCACAAGTGTTAATTTACC 57 NA DesignNoJunction, InUTR Mus musculus 50 Msi2 ENSMUSG00000069769 ENSMUST00000107909,ENSMUST00000092794,ENSMUST00000107908,ENSMUST00000093952 2 4 4 134 11 88578674 88579026 CTCACCAGATAGCCTTAGAG 58 88577864 88577883 TTATCTACACTTGCTGGGTC 59 NA Mus musculus 50 E130309D14Rik ENSMUSG00000069814 ENSMUST00000100866 1 1 1 266 11 74433285 74433303 GAAGAGCTCTTCCAGAGAC 59 74448774 74451461 TTCTTGTTGGTGAGACTGG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Sat2 ENSMUSG00000069835 ENSMUST00000092969,ENSMUST00000108656 3 2 2 82 11 69436034 69436214 ATCAGTGAAGAAGCTCTGC 59 69436260 69436278 GGTGCTGGGATAATCTCTG 59 NA Mus musculus 50 4933402J07Rik ENSMUSG00000069971 ENSMUST00000093342 2 1 1 80 8 90092500 90106494 TAAGAAGTCTGGTCAGTCTG 58 90109912 90109933 GTTTCTAGGGCTATAACATCCT 59 NA Mus musculus 50 Eif3g ENSMUSG00000070319 ENSMUST00000004206 2 1 1 91 9 20700658 20702162 GCAAGGAGGAAGAATTGGA 59 20700585 20700603 GAGACGTCATCACTGACTG 59 NA Mus musculus 50 OTTMUSG00000007589 ENSMUSG00000070330 ENSMUST00000093905 1 1 1 136 11 117724227 117724245 CTCGTCCTCATCGTATGTG 59 117725450 117725468 CTGATGTAGATGCTGAGCC 59 NA DesignNoJunction Mus musculus 50 Ampd1 ENSMUSG00000070385 ENSMUST00000090715 1 1 1 80 3 102892390 102892409 CTTACCCAAATCTGGATGAC 57 102892452 102893978 CATAAGTCTTAACAGGCCC 57 NA Mus musculus 50 Gltscr1 ENSMUSG00000070808 ENSMUST00000094821 1 1 1 80 7 16560806 16561028 ACGACTACCATAAAGTGGA 57 16560744 16560762 ATTTATTGAGCATGGCCTG 58 NA Mus musculus 50 OTTMUSG00000017677 ENSMUSG00000071745 ENSMUST00000080324 1 1 1 87 X 70388359 70388377 CTTACCCTGGATAGTTGCC 59 70386998 70388308 GTCACACGGATATCTCCTC 58 NA Nonspecific, InUTR Mus musculus 50 Adam25 ENSMUSG00000071937 ENSMUST00000096663 2 1 1 60 8 41839855 41839874 TACTTGGAGTTGAGATGTGG 59 41839895 41839915 AGTTCTTCTATGCTACGTACC 59 NA DesignNoJunctionSingleExon Mus musculus 50 Gm75 ENSMUSG00000072575 ENSMUST00000100645 3 1 1 60 14 51736589 51736607 AGAAGGAGTTACAGCTACG 58 51736631 51736649 CTATGCTGTCGACATACCC 59 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000072618 ENSMUSG00000072618 ENSMUST00000100713 1 1 1 60 15 36801383 36801401 CTGTTACAGAACTCCAGCC 59 36801341 36801359 CTCTGACTGTGATGTTTGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 Nfxl1 ENSMUSG00000072889 ENSMUST00000087216,ENSMUST00000074948 2 2 2 176 5 72932270 72941547 GATTATCCCTGGCCATGTC 59 72932112 72932132 GCATTTATGACCACAAGAAGG 59 NA DesignNoJunction Mus musculus 50 EG435337 ENSMUSG00000072905 ENSMUST00000101168 1 1 1 234 12 89510731 89512770 AAGATGGTACTCACCAGGT 59 89510515 89510533 CTTAGGATCGGTACCAGGA 59 NA DesignNoJunctionSingleExon, InUTR Mus musculus 50 Gm732 ENSMUSG00000073006 ENSMUST00000101290 3 1 1 74 X 105142591 105143651 CACAAGTGTCCGGATATCTC 59 105142536 105142554 ATAAGCATGAGTGGAAGGA 57 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000073105 ENSMUSG00000073105 ENSMUST00000101453 1 1 1 80 12 51725609 51726069 CTGATCAGGCAATCCTCTG 59 51727127 51727147 AGTCCAAGATGTTCACTTCTC 59 NA InUTR Mus musculus 50 Zfp449 ENSMUSG00000073176 ENSMUST00000101560,ENSMUST00000101559 3 2 2 122 X 53606735 53606753 GATGGAACCTGTTCAGGAG 59 53606838 53615656 GGTAACTGATAACCAGGGTC 59 NA Mus musculus 50 EG667977 ENSMUSG00000073402 ENSMUST00000040467,ENSMUST00000097335 1 2 2 89 17 36302340 36302360 GAGTTGTGATCATCATTGGAG 58 36302093 36302111 CAGCCAGAGCATAGTTCTC 59 NA DesignNoJunction Mus musculus 50 Arhgdig ENSMUSG00000073433 ENSMUST00000025019 3 1 1 108 17 26336960 26336981 CCTATCATCATGGACCTTACAG 59 26336612 26336705 CCTTGTTGACCTTGAAGGT 59 NA Mus musculus 50 Vmn2r111 ENSMUSG00000073445 ENSMUST00000092491 1 1 1 61 17 22696130 22705820 AAAGGAAGTACACAGGTGC 59 22696087 22696105 TTTCTAGATCCAGGACCAC 57 NA Nonspecific, DesignRelaxed Mus musculus 50 Ccl27 ENSMUSG00000073877 ENSMUST00000108019 1 1 3 127 4 42024621 42024850 GAGGAGGATATCTACTGGG 57 42025055 42025073 GACAAACAGCTCATTAGGC 58 NA Nonspecific, DesignRelaxed Mus musculus 50 AV071699 ENSMUSG00000074005 ENSMUST00000098277 3 1 1 69 9 121581581 121581602 GAACAAGAACAGCTCTTATCTC 58 121581632 121581650 TGTTTAATGACTGCCAGCT 59 NA DesignNoJunctionSingleExon Mus musculus 50 Adh6b ENSMUSG00000074206 ENSMUST00000090166 1 1 1 116 3 138015992 138016970 TCATTGAAACCATGGTTGC 58 138017050 138017068 GGAGAAGTACCAATGGGTC 59 NA Mus musculus 50 Etohi1 ENSMUSG00000074519 ENSMUST00000098999,ENSMUST00000108926,ENSMUST00000108925 2 3 3 60 2 177766037 177766056 TCTCTACAAAGGTGTGATGG 59 177766078 177766305 CCAACTGTAACCTATAGCTG 57 NA Nonspecific, DesignRelaxed Mus musculus 50 ENSMUSG00000074683 ENSMUSG00000074683 ENSMUST00000099208 3 1 1 61 10 118320030 118320048 AAGCCATGATTTCAGAGTC 57 118319987 118320006 TCTGGAACAAGAAGTATCGT 58 NA DesignNoJunctionSingleExon Mus musculus 50 EG245263 ENSMUSG00000075045 ENSMUST00000099726 2 1 1 62 10 57698383 57698402 ATGAACTGCTGACTGAAGTC 59 57698340 57698358 TTTCCTCCACATTCACAGG 59 NA DesignNoJunctionSingleExon Mus musculus 50 Olfr1233 ENSMUSG00000075091 ENSMUST00000099784 1 1 1 60 2 89180063 89180081 ATGTGACAAGGATGAACCA 58 89180021 89180039 CCCATTATCCAACATACCC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ttc30a1 ENSMUSG00000075271 ENSMUST00000099994 3 1 1 60 2 75817875 75817895 GAGGAAGAAAGAATTCACACC 58 75817835 75817853 CTTTCAACAGTCTGGACTC 57 NA DesignNoJunctionSingleExon Mus musculus 50 Ywhaq ENSMUSG00000076432 ENSMUST00000110976,ENSMUST00000049531 2 2 3 63 12 21422692 21422710 CTATCGGGAGAAAGTGGAG 58 21404214 21422665 ATCCAACAATTCCAGGACC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 TRBV26 ENSMUSG00000076479 ENSMUST00000103280 2 1 1 60 6 41177715 41177736 ATTCAGACTCCAAGATATCTGG 59 41177757 41177775 GGATACACCTCATCTTTGC 57 NA DesignNoJunctionSingleExon Mus musculus 50 IGKV5-39 ENSMUSG00000076569 ENSMUST00000103370 1 1 1 60 6 69850600 69850619 TTAGCGACTACTTACACTGG 58 69850559 69850577 TTGATGAGAAGCCTTGGAG 59 NA DesignNoJunctionSingleExon Mus musculus 50 IGHV1S56 ENSMUSG00000076740 ENSMUST00000103549 3 1 1 85 12 117190885 117190904 TGGATTGGACGGATTTATCC 59 117190819 117190837 GATTTGTCTGCAGTCAGTG 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000063691 ENSMUSG00000078203 ENSMUST00000105000 1 1 1 60 2 19929975 19929993 TACCAGCATCTTACTTGCC 59 19930016 19930035 AAGAGTTAGAAGCACAAAGC 58 NA DesignNoJunctionSingleExon Mus musculus 50 ENSMUSG00000071343 ENSMUSG00000078636 ENSMUST00000107041 3 1 1 221 7 107910110 107910128 CTTGTCATTAACGGGAAGC 58 107909907 107909926 ATATTTCTCGTGGTTCACAC 57 NA DesignNoJunctionSingleExon Mus musculus 50 MGI:108437 ENSMUSG00000078690 ENSMUST00000107533 1 1 1 118 7 68347541 68347559 AGAAGAGCAGAAGGAACAG 58 68342729 68347120 ACAGTGAGACTCTACATGAG 58 NA InUTR Mus musculus 50 A2AF45_MOUSE ENSMUSG00000079387 ENSMUST00000101185 3 1 1 80 X 145343478 145350376 AAATTGACAGATCGTCTGCA 59 145350416 145350437 GTTCAACTGTCTCATTTCTTCG 59 NA Nonspecific Mus musculus 50 EG622640 ENSMUSG00000079394 ENSMUST00000112787 1 1 1 81 14 4102474 4102494 CAATGAGAGGAAGGAAATGTG 58 4102534 4103515 GTTGAATTCAGTGTTCATCCTG 59 NA Nonspecific Mus musculus 50 A2AHC8_MOUSE ENSMUSG00000079697 ENSMUST00000115561 3 1 1 81 X 8452400 8453024 GAATGAAGCTGACATCAGTG 58 8453067 8453086 GCAACGTCAGAATCATTCTC 59 NA DesignRelaxed Mus musculus 50 Trim25 ENSMUSG00000000275 ENSMUST00000000284,ENSMUST00000107896,ENSMUST00000107895,ENSMUST00000100620 1 4 5 80 11 88877121 88877516 GCTTCTGGAGTATTTCGTG 58 88877559 88877578 GTGGTGTACTTGTTTGACAG 58 NA Mus musculus 50 Arvcf ENSMUSG00000000325 ENSMUST00000115613,ENSMUST00000115618,ENSMUST00000090103,ENSMUST00000115614,ENSMUST00000115612,ENSMUST00000115610,ENSMUST00000115611 3 7 7 112 16 18397107 18397125 TACTGGAGGAGACAGTGAC 59 18397198 18397398 CTTAGTGACCTTAGTCTCAGTC 59 NA Mus musculus 50 Sept1 ENSMUSG00000000486 ENSMUST00000000497,ENSMUST00000106314 1 2 2 66 7 134361659 134361677 TGACTTCACACTCATGGTG 59 134361528 134361546 GAACAAGCTGTTGATGAGG 58 NA Nonspecific, DesignNoJunction Mus musculus 50 Gabrg1 ENSMUSG00000001260 ENSMUST00000031119,ENSMUST00000101143 2 2 2 80 5 71185949 71207210 GTCCAGATATAGGCGTGAG 59 71185887 71185905 TGTTTATGGGATCCACAGG 58 NA Mus musculus 50 Ccdc44 ENSMUSG00000001983 ENSMUST00000002048 3 1 1 97 11 105930894 105930912 AAGTCAACCATCGAGTCAG 59 105933227 105933245 TCAATGAGCAGAGAAGAGC 59 NA DesignNoJunction Mus musculus 50 Stat6 ENSMUSG00000002147 ENSMUST00000092074,ENSMUST00000099159 2 2 2 81 10 127096708 127096728 AGATGTGACTATGGTAGAGGA 59 127096771 127096866 CATGTCTTCACTGACCCAG 59 NA Mus musculus 50 4930432K09Rik ENSMUSG00000002240 ENSMUST00000101056 3 1 2 89 5 88264751 88266644 CAAAGAGGAGACGTTATCCT 58 88271670 88271688 ATGGATTAAGTGGGTAGCG 59 NA Mus musculus 50 Kcnn1 ENSMUSG00000002908 ENSMUST00000110081,ENSMUST00000110080,ENSMUST00000110078,ENSMUST00000002987 1 4 4 80 8 73376601 73376619 CTGTGTTGTTGGTCTTCAG 58 73374627 73376557 GCTTATCGTGGTACCTCTC 59 NA Mus musculus 50 Arid3b ENSMUSG00000004661 ENSMUST00000052570,ENSMUST00000114165,ENSMUST00000098686 1 3 4 103 9 57658281 57681434 CAGCTTAAGCAGAATGGTG 58 57658025 57658044 TCACCGTCTAGTTCATACAG 58 NA Mus musculus 50 Abca13 ENSMUSG00000004668 ENSMUST00000042740,ENSMUST00000109684 2 2 2 80 11 9177911 9177930 GAAGACATGTGAATTGGCTC 59 9177969 9188436 GAGTCCTCAGAGAAAGATATCAG 59 NA Mus musculus 50 Cd44 ENSMUSG00000005087 ENSMUST00000111196 1 1 15 80 2 102674483 102682424 AGCACAACAAATACAGACTC 58 102674422 102674440 CAAGTCTTCCACCAAATGG 58 NA Mus musculus 50 Zfp592 ENSMUSG00000005621 ENSMUST00000005761,ENSMUST00000107353 2 2 2 80 7 88170330 88170350 CAGATGCGAGATTATATGGTC 58 88170392 88174349 GCATACCTGACAAGTTAGC 58 NA Mus musculus 50 Rplp1 ENSMUSG00000007892 ENSMUST00000008036 1 1 1 76 9 61761731 61761749 CATTAAAGCAGCTGGTGTC 59 61761307 61761325 CAATGTTGACATTGGCCAG 59 NA Nonspecific, DesignNoJunction Mus musculus 50 Prpf31 ENSMUSG00000008373 ENSMUST00000008517,ENSMUST00000108636 3 2 3 80 7 3591424 3591442 GGGAAGTCAACAATTCGTG 59 3591486 3592413 CACAATCTCTAGACCCTGG 58 NA Mus musculus 50 Srp14 ENSMUSG00000009549 ENSMUST00000009693 3 1 2 82 2 118302040 118302577 AACAAGTTTCAGATGGCCT 59 118301976 118301997 TTACTCTTGTTCTTCTTGTCCC 59 NA Mus musculus 50 Cars ENSMUSG00000010755 ENSMUST00000010899,ENSMUST00000105909 2 2 2 88 7 150773064 150773082 AAGATGGGAAGAAGGTGAC 58 150772401 150773012 GAAGGAGATGTAGGACCTG 58 NA Mus musculus 50 2310076L09Rik ENSMUSG00000011305 ENSMUST00000019808,ENSMUST00000113072 3 2 2 101 17 56253389 56253407 CCTATGAACACTCTTTGGG 57 56252391 56253324 TCTGCATATGCTGGATCAG 59 NA DesignRelaxed Mus musculus 50 Tnpo3 ENSMUSG00000012535 ENSMUST00000115251,ENSMUST00000012679 3 2 2 80 6 29507029 29507048 CTCCTAGAACAGCAGAATGG 59 29505300 29506986 CTGAATAAATCGGGTGGCT 59 NA Mus musculus 50 Ptgds ENSMUSG00000015090 ENSMUST00000114251,ENSMUST00000015234,ENSMUST00000114259 1 3 3 81 2 25323386 25323405 GAAATTCACCACCTTTAGCA 58 25322852 25323342 TTGAATGCACTTATCCGGT 59 NA Mus musculus 50 Lamp2 ENSMUSG00000016534 ENSMUST00000061755 1 1 3 83 X 35775021 35777454 GTATTCTACAGCCCAGGAG 58 35774956 35774974 ATCAAGCCTGAAAGACCAG 59 NA Mus musculus 50 Ctsa ENSMUSG00000017760 ENSMUST00000017904,ENSMUST00000103093,ENSMUST00000103092,ENSMUST00000109323,ENSMUST00000109319,ENSMUST00000109318 2 6 7 109 2 164659610 164659629 GGATGAAATCGATTGTCTCC 58 164659701 164659830 ACTCCACAAACCAGTAGTG 59 NA Mus musculus 50 Pscd4 ENSMUSG00000018008 ENSMUST00000043069 2 1 2 195 15 78433196 78435075 AGACATCCAGAAACTGAAGG 59 78437422 78437440 GATGTCCTGGACATCAGAG 59 NA Mus musculus 50 Abi3 ENSMUSG00000018381 ENSMUST00000059026,ENSMUST00000018525 2 2 2 83 11 95698430 95698448 GAATGCTGGATCTACAGGG 59 95697250 95698386 CCATATGCATGTTTACCATCTG 59 NA Mus musculus 50 Atp6v0a1 ENSMUSG00000019302 ENSMUST00000044721 3 1 4 83 11 100910782 100916350 GACGAAGTGTTTGACTTTGG 59 100916396 100916414 GGTGTTGGAGATACAACCC 59 NA Mus musculus 50 Hdac2 ENSMUSG00000019777 ENSMUST00000019911,ENSMUST00000105510 3 2 2 85 10 36711629 36711647 TTATACAACAGATCGCGTG 57 36711696 36713423 CACCAATATCCCTCAAGTC 57 NA Mus musculus 50 Trdn ENSMUSG00000019787 ENSMUST00000075979,ENSMUST00000050626 3 2 2 188 10 32903810 32906452 CCTGAGAAGACAGCAACTC 59 32915852 32915870 TTTCGGAGTTTCTTTGGCT 59 NA Mus musculus 50 Cep290 ENSMUSG00000019971 ENSMUST00000099316 3 1 2 81 10 99985969 99985987 AAGTACAGGGACATCTTGC 59 99986032 99991195 ATGCATTCTCACACTCCAG 59 NA Mus musculus 50 Dock2 ENSMUSG00000020143 ENSMUST00000101364 3 1 4 86 11 34338334 34338352 ATCCAAGAGATCATGGTCC 58 34263909 34338284 AGACCTTACAATCAAAGCG 57 NA Mus musculus 50 Mknk2 ENSMUSG00000020190 ENSMUST00000003433,ENSMUST00000072616,ENSMUST00000105337 1 3 4 80 10 80134389 80134488 GTTCGAAGATGTCTATCAGCT 59 80134329 80134348 ATGAGATTGACACAGGTCTG 59 NA Mus musculus 50 Adarb1 ENSMUSG00000020262 ENSMUST00000098374,ENSMUST00000105406,ENSMUST00000095501 3 3 6 89 10 76775146 76775165 GGAGACGCCAGAATATTCTC 59 76774003 76775095 ATGTCTATCTGCTGGTTCTG 59 NA Mus musculus 50 Tnip1 ENSMUSG00000020400 ENSMUST00000102731,ENSMUST00000108886,ENSMUST00000018482,ENSMUST00000102730,ENSMUST00000108885,ENSMUST00000108889,ENSMUST00000093101 1 7 8 112 11 54734387 54737613 TAGAGATGGAAGAGACCGA 58 54734293 54734311 GTATTCTCGTTGCCTTGTG 58 NA Mus musculus 50 Limk2 ENSMUSG00000020451 ENSMUST00000101642,ENSMUST00000102958,ENSMUST00000101638,ENSMUST00000093394,ENSMUST00000101640 3 5 6 84 11 3255912 3258124 TCAAGTGAAAGAGGTCAACC 59 3255847 3255865 ATTGATCTCCAAGATGCGG 59 NA Mus musculus 50 Fbxl20 ENSMUSG00000020883 ENSMUST00000103143,ENSMUST00000075071,ENSMUST00000107551 3 3 4 82 11 97963105 97970820 AGACAACAGATGCTACCTG 58 97963041 97963059 TATTGACGTACAGGAAGCC 59 NA Mus musculus 50 1700023F06Rik ENSMUSG00000020940 ENSMUST00000021323,ENSMUST00000107026 2 2 2 108 11 103062605 103062623 AAGCTAACCAGCCATACTG 59 103062233 103062412 AAGATATCCTGGAAGGCTG 58 NA Mus musculus 50 Brctd1 ENSMUSG00000021601 ENSMUST00000022092 3 1 2 89 13 77264498 77264516 GATAAGCGGAGTGACTCTC 59 77251932 77251950 ATGTGTTATCCCACTTGGA 58 NA DesignNoJunction Mus musculus 50 Tsc22d1 ENSMUSG00000022010 ENSMUST00000088906,ENSMUST00000048371,ENSMUST00000110887,ENSMUST00000100376,ENSMUST00000022587 2 5 5 65 14 76905093 76906230 GAGCAAGCTATGGATCTGG 59 76906259 76906277 CAGAACTTCCACTTCCTCC 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Bmp1 ENSMUSG00000022098 ENSMUST00000022693,ENSMUST00000072686 2 2 4 86 14 70889885 70889904 AGTACAACAATATGCGTGTG 58 70886071 70889839 CATCCTTATCTGAGAAGAAGTG 57 NA Mus musculus 50 Pdzd2 ENSMUSG00000022197 ENSMUST00000075317,ENSMUST00000096893 1 2 3 103 15 12337126 12340772 GACATCACAGGAATACCAC 57 12337041 12337059 TGATGGAAATAACGGATGG 57 NA Mus musculus 50 Csmd3 ENSMUSG00000022311 ENSMUST00000100670 2 1 4 81 15 47587564 47587583 GTTGTTGAGGTGTTTGATGG 59 47587016 47587521 GAAGTGACTCTCCTGAATGG 59 NA Mus musculus 50 Col14a1 ENSMUSG00000022371 ENSMUST00000110221 3 1 3 80 15 55243256 55250250 ATGGAAGAAGTGGTTATGGT 58 55250290 55250311 GACTTTATACTCAGTGTCTGGA 58 NA Mus musculus 50 Kif21a ENSMUSG00000022629 ENSMUST00000100304 3 1 6 90 15 90811366 90811386 AAGAACTTGACCAGACACG 59 90811294 90811315 GATAGTCTCCTTGTCTGAAGAC 59 NA Mus musculus 50 Snai2 ENSMUSG00000022676 ENSMUST00000023356 2 1 1 61 16 14707331 14707350 GGACACATTAGAACTCACAC 58 14708229 14708247 AAAGCCCTATTGCAGTGAG 59 NA DesignNoJunction Mus musculus 50 Arl6 ENSMUSG00000022722 ENSMUST00000023405 3 1 2 95 16 59621055 59621073 AGCATTAAAGACAAGCCGT 59 59613660 59618628 TTGGATCTGATCTTGGAGC 59 NA Mus musculus 50 Stxbp5l ENSMUSG00000022829 ENSMUST00000114782,ENSMUST00000114780,ENSMUST00000114790,ENSMUST00000023526,ENSMUST00000114778 3 5 10 83 16 37188700 37188722 CTATAGATCAAGTGACCTGTACC 59 37174433 37188657 TTCAGCTCTGTTAAGCCTG 59 NA Mus musculus 50 Cxadr ENSMUSG00000022865 ENSMUST00000114229,ENSMUST00000023572 1 2 2 110 16 78329302 78329320 TAAATGTGACCAACCTGCA 59 78329394 78333615 AAGGCTTAACAAGAACGGT 59 NA Mus musculus 50 Tarbp2 ENSMUSG00000023051 ENSMUST00000023813,ENSMUST00000100168 3 2 2 90 15 102353474 102353627 GGATATTGAGGAACTGAGCC 59 102353680 102353698 GGTTGCAGAACCATAACAC 59 NA Nonspecific Mus musculus 50 Anxa1 ENSMUSG00000024659 ENSMUST00000099584,ENSMUST00000025561 1 2 2 81 19 20454906 20456557 ATAGAGTCTACAGAGAAGAGCT 59 20454846 20454864 AAGGCTTTCCGAAAGTCTC 59 NA Mus musculus 50 Rab3il1 ENSMUSG00000024663 ENSMUST00000113161,ENSMUST00000025565 2 2 2 85 19 10104960 10106850 TAACAACACCAACACATGTG 58 10106898 10106916 AATAGTGGCTGTCAGAGTC 58 NA Mus musculus 50 Ddb1 ENSMUSG00000024740 ENSMUST00000025649 2 1 2 81 19 10686218 10687370 CTCCTATCATTAAGCAAAGCAC 59 10687412 10687430 TCCATATCTCCCAGAAGGT 58 NA Mus musculus 50 Fn3k ENSMUSG00000025175 ENSMUST00000026175,ENSMUST00000092302,ENSMUST00000103014 2 3 3 159 11 121298724 121300603 GAAGAGCCTTAGCAGTCAG 59 121301419 121301437 GTGAAAGCCAAACTTGGTC 59 NA Mus musculus 50 Alas2 ENSMUSG00000025270 ENSMUST00000112715 1 1 2 100 X 146986800 146986820 CTATTTAGTATTGGACGCTGC 58 146986882 146987559 CTGTCTTGGAGTTCTCCTC 58 NA Mus musculus 50 Odf3 ENSMUSG00000025482 ENSMUST00000026555,ENSMUST00000106049 2 2 2 106 7 148034620 148034638 CCCAAGATCCTGAAGACTG 59 148034708 148035106 TCTGGAAAGTAATCACCCG 58 NA Mus musculus 50 Terf1 ENSMUSG00000025925 ENSMUST00000027057 2 1 2 84 1 15805985 15806004 GAAATTGGCAGCTTTAAGGA 58 15806051 15809030 ACTTCCTTTCTAAAGGCGT 58 NA Mus musculus 50 Tcfap2b ENSMUSG00000025927 ENSMUST00000027059,ENSMUST00000064976 2 2 2 108 1 19221140 19221158 AGAGTTTCCTGCTAAAGCC 59 19221229 19224143 TTTACAAAGTTGCTTGGTGG 59 NA Mus musculus 50 Lamb3 ENSMUSG00000026639 ENSMUST00000016315,ENSMUST00000110821 3 2 3 106 1 195152177 195152195 GTCACAGCTACGTCTACAG 59 195152265 195154103 CACAGACATTGTTGACCTG 58 NA Mus musculus 50 Mllt10 ENSMUSG00000026743 ENSMUST00000028076,ENSMUST00000114680,ENSMUST00000114671,ENSMUST00000091418,ENSMUST00000114670,ENSMUST00000114669 1 6 6 80 2 18125311 18125329 TTGAACAGCTCTTGGAGAG 59 18125373 18127636 TTCCTAGAATGTCACCAGG 58 NA Mus musculus 50 Mllt10 ENSMUSG00000026743 ENSMUST00000028076,ENSMUST00000114680 1 2 6 80 2 17992763 17992784 ATTGTTCAAGTACCTACTGGAC 59 17992825 18023096 CAGCTCACATCTCACTCTG 59 NA Mus musculus 50 Abi2 ENSMUSG00000026782 ENSMUST00000087417 2 1 2 81 1 60494009 60494027 GGCCAGTTCGTTATATTCG 58 60494071 60495799 AATCTAAGCAACCACTTCAC 58 NA Mus musculus 50 Acvr1c ENSMUSG00000026834 ENSMUST00000028178,ENSMUST00000112608,ENSMUST00000100085 2 3 4 82 2 58137404 58140106 CAGCTGACAACAAAGATAATGG 59 58137343 58137362 ATAGTCATACAAGGAGCCCT 59 NA Mus musculus 50 Psd4 ENSMUSG00000026979 ENSMUST00000102942,ENSMUST00000056641 3 2 2 80 2 24256785 24256804 GGGAACGAATTCTCTACCAG 59 24256845 24257055 TGTGAACAGAATCTACTGAGG 59 NA Mus musculus 50 Fbxo3 ENSMUSG00000027180 ENSMUST00000028603 1 1 4 100 2 103895173 103900046 TAGCTCGATTGGAAATGGG 59 103900110 103900128 TTCATCCATGTCTGCAGAG 59 NA Mus musculus 50 Lrp4 ENSMUSG00000027253 ENSMUST00000111341,ENSMUST00000028689 2 2 2 80 2 91332574 91332698 ACATCATCACTACAGGTCTG 58 91332741 91332759 CTGTGTCTGTCCAGTACAC 59 NA Mus musculus 50 Tyro3 ENSMUSG00000027298 ENSMUST00000110783,ENSMUST00000110786,ENSMUST00000028762,ENSMUST00000110781,ENSMUST00000028763 2 5 5 80 2 119638968 119638986 GCCGAGATTTACAACTACC 57 119639028 119642392 CATGAGATCATACACTTCCTC 57 NA Mus musculus 50 Gabpb1 ENSMUSG00000027361 ENSMUST00000110424,ENSMUST00000028839,ENSMUST00000103228,ENSMUST00000089741,ENSMUST00000103226 3 5 10 81 2 126472480 126475820 TTCTTCAGAAACTCCAGTAGTG 59 126472420 126472440 GCTAACTACTTGCTGAATTGC 59 NA Mus musculus 50 Asph ENSMUSG00000028207 ENSMUST00000108337,ENSMUST00000084915,ENSMUST00000108335,ENSMUST00000108334,ENSMUST00000108333 3 5 17 160 4 9525429 9525447 GGAAGTAAGACACCAAGAC 57 9504112 9510969 TTTAAGTATCTGGTGGTGTG 57 NA Mus musculus 50 Cpne3 ENSMUSG00000028228 ENSMUST00000029885 2 1 2 81 4 19463726 19463744 GATCGCATGATCTCATTGG 58 19462435 19463682 TCATATTCAACAGGTGAGCT 58 NA Mus musculus 50 Rod1 ENSMUSG00000028382 ENSMUST00000030076,ENSMUST00000107535,ENSMUST00000102883 2 3 3 80 4 59490073 59490091 ATGGATGACCTGAAGAACC 58 59489872 59490030 CATCTTACGGTCTTTCTGGA 59 NA Mus musculus 50 Hsdl2 ENSMUSG00000028383 ENSMUST00000107529 3 1 3 180 4 59604960 59605039 GAATATGAAGCTAGCGGGA 58 59605182 59606119 AGCTGCTTCAATTTCTTCAG 58 NA Mus musculus 50 2310028H24Rik ENSMUSG00000028439 ENSMUST00000108049,ENSMUST00000108052 3 2 3 90 4 41468645 41468663 TAGCTCTTGACACAGACAG 58 41467415 41467947 AAATCTTGGTTGATCTGCTC 58 NA Nonspecific Mus musculus 50 Psip1 ENSMUSG00000028484 ENSMUST00000030207,ENSMUST00000107216,ENSMUST00000107215,ENSMUST00000107214 3 4 4 80 4 83131666 83131684 CGATTTCAAACCTGGAGAC 58 83128421 83131623 TCAGGAACTTCATCTACTCG 58 NA Mus musculus 50 B4galt2 ENSMUSG00000028541 ENSMUST00000030266,ENSMUST00000106421 2 2 2 102 4 117549560 117549578 CTGGGATGAAGATCTCACG 59 117546600 117549497 TTATTAAACCTCTGAGGGTTGG 59 NA Nonspecific, DesignRelaxed Mus musculus 50 Pomgnt1 ENSMUSG00000028700 ENSMUST00000106498,ENSMUST00000106496,ENSMUST00000079561,ENSMUST00000079267,ENSMUST00000106494 1 5 5 81 4 115824470 115824488 AAGTTGATCCTGGACACTC 58 115824533 115824693 CTAGGGCCTCATCATAGTC 58 NA Mus musculus 50 Espn ENSMUSG00000028943 ENSMUST00000105658,ENSMUST00000105653,ENSMUST00000105659,ENSMUST00000030785,ENSMUST00000084114,ENSMUST00000070018,ENSMUST00000080042,ENSMUST00000105657,ENSMUST00000103196,ENSMUST00000105656,ENSMUST00000105655,ENSMUST00000105654 1 12 13 70 4 151504880 151504898 GTTCCTCGTCTTCTACTGG 59 151502613 151502631 AAGCTCTGAGTTATCACCC 58 NA DesignNoJunction Mus musculus 50 Espn ENSMUSG00000028943 ENSMUST00000105659,ENSMUST00000030785,ENSMUST00000084114,ENSMUST00000070018,ENSMUST00000080042,ENSMUST00000105657 2 6 13 234 4 151508544 151509593 GATCGAATCGAGGGATTCC 59 151508328 151508346 TTATTCAGATGCAGTCCCA 58 NA DesignRelaxed Mus musculus 50 Tmub1 ENSMUSG00000028958 ENSMUST00000030799,ENSMUST00000115033,ENSMUST00000115036 3 3 3 115 5 23952395 23952413 CTCAATGACTCTGAGCAGG 59 23952038 23952057 AGTTGACCTTGGTAGATGAG 58 NA DesignNoJunction Mus musculus 50 Park7 ENSMUSG00000028964 ENSMUST00000105675,ENSMUST00000030805,ENSMUST0